GCF_000002495.2 PRJNA1433 SAMN02953596 AACU00000000.3 reference genome 242507 318829 Pyricularia oryzae 70-15 strain=70-15 na latest Chromosome Major Full 2011-10-14 MG8 International Rice Blast Genome Consortium GCA_000002495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/495/GCF_000002495.2_MG8/ na na na haploid fungi 40979121 40949321 51.500000 7 53 216 International Rice Blast Genome Consortium Annotation submitted by International Rice Blast Genome Consortium 2019-11-29 13184 12825 228 15846337 GCF_000002515.2 PRJNA12377 SAMEA3138170 na reference genome 28985 28985 Kluyveromyces lactis strain=NRRL Y-1140 na latest Complete Genome Major Full 2004-07-02 ASM251v1 Genolevures Consortium GCA_000002515.1 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/515/GCF_000002515.2_ASM251v1/ na na na haploid fungi 10689156 10689156 39.000000 6 6 6 Genolevures Consortium Annotation submitted by Genolevures Consortium 2025-07-15 5335 5084 251 15229592;15691736 GCF_000002655.1 PRJNA14003 SAMN00115746 AAHF00000000.1 reference genome 330879 746128 Aspergillus fumigatus Af293 strain=Af293 na latest Chromosome Major Full 2005-06-10 ASM265v1 J. Craig Venter Institute GCA_000002655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/655/GCF_000002655.1_ASM265v1/ na na na haploid fungi 29384958 28809958 50.000000 8 8 19 J. Craig Venter Institute Annotation submitted by J. Craig Venter Institute 2025-12-11 10086 9823 262 16372009 GCF_000002715.2 PRJNA18467 SAMN02953636 AAKD00000000.3 reference genome 344612 5057 Aspergillus clavatus NRRL 1 strain=NRRL 1 na latest Scaffold Minor Full 2006-12-14 ASM271v1 J. Craig Venter Institute GCA_000002715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/715/GCF_000002715.2_ASM271v1/ na assembly from type material na haploid fungi 27859441 27850641 49.000000 0 143 231 J. Craig Venter Institute Annotation submitted by J. Craig Venter Institute 2025-09-15 9375 9117 235 18404212 GCF_000002855.4 PRJNA19263 SAMEA3283178 na reference genome 5061 5061 Aspergillus niger na na latest Scaffold Major Full 2007-04-11 ASM285v2 DSM, The Netherlands GCA_000002855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/855/GCF_000002855.4_ASM285v2/ na na na haploid fungi 33975768 33930600 50.500000 8 19 469 DSM, The Netherlands Annotation submitted by DSM, The Netherlands 2025-02-21 14404 14058 329 na GCF_000002945.2 PRJNA127 SAMEA3138176 na reference genome 4896 4896 Schizosaccharomyces pombe strain=972h- na latest Chromosome Major Full 2019-07-23 ASM294v3 S. pombe European Sequencing Consortium (EUPOM) GCA_000002945.3 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/945/GCF_000002945.2_ASM294v3/ na na na haploid fungi 12571820 12571420 36.000000 3 3 7 PomBase Annotation submitted by PomBase 2024-08-16 12645 5124 7489 2446871;2780299;4046021;6092057;11859360;15811919 GCF_000003125.1 PRJNA38857 SAMN02953686 ABAS00000000.1 reference genome 441959 28564 Talaromyces stipitatus ATCC 10500 strain=ATCC 10500 na latest Scaffold Major Full 2008-12-22 JCVI-TSTA1-3.0 J. Craig Venter Institute GCA_000003125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/125/GCF_000003125.1_JCVI-TSTA1-3.0/ na assembly from type material na haploid fungi 35685443 35558430 46.000000 0 820 960 J. Craig Venter Institute Annotation submitted by J. Craig Venter Institute 2023-11-13 12572 12455 104 25676766 GCF_000003135.1 PRJNA224116 SAMN00001475 ACHI00000000.1 na 548480 216816 Bifidobacterium longum subsp. longum ATCC 55813 strain=ATCC 55813 na latest Scaffold Major Full 2009-05-05 ASM313v1 Baylor College of Medicine GCA_000003135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/135/GCF_000003135.1_ASM313v1/ na na na haploid bacteria 2396359 2372858 60.500000 1 114 140 NCBI RefSeq GCF_000003135.1-RS_2025_07_24 2025-07-24 2052 1923 64 na GCF_000003215.1 PRJNA224116 SAMN02470531 ABFD00000000.2 na 455631 1496 Clostridioides difficile QCD-66c26 na QCD-66c26 latest Chromosome Major Full 2009-01-30 ASM321v1 McGill University GCA_000003215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/215/GCF_000003215.1_ASM321v1/ na na na haploid bacteria 4127750 4126050 28.500000 1 15 31 NCBI RefSeq GCF_000003215.1-RS_2026_02_28 2026-02-28 3756 3648 54 na GCF_000003515.1 PRJNA39807 SAMN02953631 AAIW00000000.1 reference genome 336963 33188 Uncinocarpus reesii 1704 strain=1704 na latest Scaffold Major Full 2009-05-21 ASM351v2 Broad Institute GCA_000003515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/515/GCF_000003515.1_ASM351v2/ na na na haploid fungi 22327935 22146268 48.500000 0 44 582 Broad Institute Annotation submitted by Broad Institute 2023-11-13 7855 7759 96 na GCF_000003525.1 PRJNA319322 SAMN02953741 ACBT00000000.1 reference genome 559297 5039 Blastomyces dermatitidis ER-3 strain=ER-3 na latest Scaffold Major Full 2009-02-24 BD_ER3_V1 Broad Institute GCA_000003525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/525/GCF_000003525.1_BD_ER3_V1/ na na na haploid fungi 66568269 66230255 37.000000 0 25 591 Broad Institute Annotation submitted by Broad Institute 2022-04-19 10080 9754 132 na GCF_000003855.2 PRJNA41099 SAMN02953742 ACBU00000000.1 reference genome 559298 1681229 Blastomyces gilchristii SLH14081 strain=SLH14081 na latest Scaffold Minor Full 2009-02-24 BD_SLH14081_V1 Broad Institute GCA_000003855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/855/GCF_000003855.2_BD_SLH14081_V1/ na na na haploid fungi 75353942 74342981 36.000000 0 100 1791 Broad Institute Annotation submitted by Broad Institute 2019-11-27 10148 9692 150 na GCF_000003925.1 PRJNA224116 SAMN00727646 ACMU00000000.1 na 526997 1405 Bacillus mycoides DSM 2048 strain=DSM 2048 na latest Chromosome Major Full 2009-05-29 ASM392v1 Naval Medical Research Center GCA_000003925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/925/GCF_000003925.1_ASM392v1/ na assembly from type material na haploid bacteria 5561906 5541906 35.000000 1 1 200 NCBI RefSeq GCF_000003925.1-RS_2026_03_24 2026-03-24 5853 5399 94 22645259 GCF_000004155.1 PRJNA264109 SAMN02953762 ACQJ00000000.2 reference genome 653667 866546 Schizosaccharomyces cryophilus OY26 strain=OY26 na latest Scaffold Major Full 2013-07-31 SCY4 Broad Institute GCA_000004155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/155/GCF_000004155.1_SCY4/ na assembly from type material na haploid fungi 11554764 11523874 37.500000 0 30 198 Broad Institute Annotation submitted by Broad Institute 2023-12-29 5494 5155 338 21511999 GCF_000005825.2 PRJNA224116 SAMN02603086 na na 398511 79885 Alkalihalophilus pseudofirmus OF4 strain=OF4 na latest Complete Genome Major Full 2010-12-15 ASM582v2 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000005825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2/ na na na haploid bacteria 4249248 4249248 40.000000 3 3 3 NCBI RefSeq GCF_000005825.2-RS_2026_03_27 2026-03-27 4335 4178 105 21951522 GCF_000005845.2 PRJNA57779 SAMN02604091 na reference genome 511145 562 Escherichia coli str. K-12 substr. MG1655 strain=K-12 substr. MG1655 na latest Complete Genome Major Full 2013-09-26 ASM584v2 Univ. Wisconsin GCA_000005845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/845/GCF_000005845.2_ASM584v2/ na na na haploid bacteria 4641652 4641652 51.000000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2022-03-09 4651 4290 215 9278503;16397293;16738553 GCF_000006335.3 PRJNA39569 SAMN02953608 AAFN00000000.2 reference genome 294747 5482 Candida tropicalis MYA-3404 strain=MYA-3404 na latest Scaffold Minor Full 2009-06-18 ASM633v3 Broad Institute GCA_000006335.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/335/GCF_000006335.3_ASM633v3/ na na na haploid fungi 14579835 14525295 33.000000 0 23 127 Broad Institute Annotation submitted by Broad Institute 2018-04-11 6441 6254 186 19465905 GCF_000006445.2 PRJNA12410 SAMEA3138183 na reference genome 284592 4959 Debaryomyces hansenii CBS767 strain=CBS767 na latest Chromosome Major Full 2008-09-16 ASM644v2 Genolevures Consortium GCA_000006445.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/445/GCF_000006445.2_ASM644v2/ na assembly from type material na haploid fungi 12152486 12151761 36.500000 7 7 14 Genolevures Consortium GCF_000006445.2-RS_2026_03 2026-03-04 6520 6282 236 15229592;18673395 GCF_000006605.1 PRJNA224116 SAMEA3283089 na na 306537 38289 Corynebacterium jeikeium K411 strain=K411 = NCTC 11915 na latest Complete Genome Major Full 2005-06-27 ASM660v1 Bielefeld Univ GCA_000006605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1/ na na na haploid bacteria 2476822 2476822 61.500000 2 2 2 NCBI RefSeq GCF_000006605.1-RS_2025_02_16 2025-02-16 2195 2076 62 15968079 GCF_000006625.1 PRJNA224116 SAMN02604098 na na 273119 134821 Ureaplasma parvum serovar 3 str. ATCC 700970 strain=ATCC 700970 na latest Complete Genome Major Full 2003-07-17 ASM662v1 Univ.AL-Birmingham GCA_000006625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/625/GCF_000006625.1_ASM662v1/ na na na haploid bacteria 751719 751719 25.500000 1 1 1 NCBI RefSeq GCF_000006625.1-RS_2025_02_25 2025-02-25 656 608 39 11048724 GCF_000006645.1 PRJNA224116 SAMN02604093 na na 187410 632 Yersinia pestis KIM10+ strain=KIM10+ na latest Complete Genome Major Full 2002-07-29 ASM664v1 Univ. Wisconsin GCA_000006645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/645/GCF_000006645.1_ASM664v1/ na na na haploid bacteria 4701745 4701745 47.500000 2 2 2 NCBI RefSeq GCF_000006645.1-RS_2025_06_03 2025-06-03 4254 3944 105 9826348;12142430 GCF_000006665.1 PRJNA224116 SAMN02604092 na na 155864 562 Escherichia coli O157:H7 str. EDL933 strain=EDL933 na latest Chromosome Major Full 2004-12-06 ASM666v1 Univ. Wisconsin GCA_000006665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/665/GCF_000006665.1_ASM666v1/ na na na haploid bacteria 5620522 5616521 50.500000 2 2 3 NCBI RefSeq GCF_000006665.1-RS_2025_04_26 2025-04-26 5631 5110 130 9722640;11206551 GCF_000006685.1 PRJNA224116 SAMN02603994 na reference genome 243161 83560 Chlamydia muridarum str. Nigg strain=Nigg na latest Complete Genome Major Full 2003-03-26 ASM668v1 TIGR GCA_000006685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/685/GCF_000006685.1_ASM668v1/ na assembly from type material na haploid bacteria 1080451 1080451 40.500000 2 2 2 NCBI RefSeq GCF_000006685.1-RS_2025_03_27 2025-03-27 944 891 46 10684935 GCF_000006725.1 PRJNA224116 SAMN02603773 na na 160492 2371 Xylella fastidiosa 9a5c strain=9a5c na latest Complete Genome Major Full 2001-01-09 ASM672v1 Sao Paulo state (Brazil) Consortium GCA_000006725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1/ na na na haploid bacteria 2731750 2731750 52.500000 3 3 3 NCBI RefSeq GCF_000006725.1-RS_2025_05_07 2025-05-07 2538 2383 58 10910347 GCF_000006745.1 PRJNA224116 SAMN02603969 na na 243277 666 Vibrio cholerae O1 biovar El Tor str. N16961 strain=N16961 na latest Complete Genome Major Full 2001-01-09 ASM674v1 TIGR GCA_000006745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1/ na na na haploid bacteria 4033464 4033464 47.500000 2 2 2 NCBI RefSeq GCF_000006745.1-RS_2024_08_23 2024-08-23 3711 3485 127 10952301 GCF_000006765.1 PRJNA57945 SAMN02603714 na reference genome 208964 287 Pseudomonas aeruginosa PAO1 strain=PAO1 na latest Complete Genome Major Full 2006-07-07 ASM676v1 PathoGenesis Corporation GCA_000006765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/765/GCF_000006765.1_ASM676v1/ na na na haploid bacteria 6264404 6264404 66.500000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2019-01-24 5697 5572 106 10984043;12644476;12644477;15608211;15716452;15908409;15995206;16030221;17015649;18978025 GCF_000006785.2 PRJNA224116 SAMN02604089 na na 160490 1314 Streptococcus pyogenes M1 GAS strain=SF370 na latest Complete Genome Major Full 2014-04-01 ASM678v2 Univ. Oklahoma GCA_000006785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2/ na na na haploid bacteria 1852433 1852433 38.500000 1 1 1 NCBI RefSeq GCF_000006785.2-RS_2025_03_27 2025-03-27 1860 1712 82 11296296;24733896 GCF_000006805.1 PRJNA224116 SAMN02604216 na na 64091 2242 Halobacterium salinarum NRC-1 strain=NRC-1; ATCC 700922 na latest Complete Genome Major Full 2001-01-09 ASM680v1 University of Maryland GCA_000006805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/805/GCF_000006805.1_ASM680v1/ na na na haploid archaea 2571010 2571010 66.000000 3 3 3 NCBI RefSeq GCF_000006805.1-RS_2025_04_07 2025-04-07 2759 2647 52 1398080;1864501;2050644;2552415;3448465;8002589;8335077;8335618;8423144;9847077;11016950 GCF_000006825.1 PRJNA224116 SAMN02604085 na na 272843 747 Pasteurella multocida subsp. multocida str. Pm70 strain=Pm70 na latest Complete Genome Major Full 2001-03-21 ASM682v1 Univ. Minnesota GCA_000006825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/825/GCF_000006825.1_ASM682v1/ na na na haploid bacteria 2257487 2257487 40.500000 1 1 1 NCBI RefSeq GCF_000006825.1-RS_2024_12_16 2024-12-16 2111 2026 80 11248100 GCF_000006845.1 PRJNA224116 SAMN02604088 na na 242231 485 Neisseria gonorrhoeae FA 1090 strain=FA 1090 na latest Complete Genome Major Full 2005-02-14 ASM684v1 Univ. Oklahoma GCA_000006845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1/ na na na haploid bacteria 2153922 2153922 52.500000 1 1 1 NCBI RefSeq GCF_000006845.1-RS_2025_04_10 2025-04-10 2250 1929 71 na GCF_000006865.1 PRJNA224116 SAMN02603339 na na 272623 1358 Lactococcus lactis subsp. lactis Il1403 strain=IL1403 na latest Complete Genome Major Full 2001-03-21 ASM686v1 INRA GCA_000006865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1/ na na na haploid bacteria 2365589 2365589 35.500000 1 1 1 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2023-11-21 2415 2258 86 11337471 GCF_000006885.1 PRJNA224116 SAMN02604002 na na 170187 1313 Streptococcus pneumoniae TIGR4 strain=TIGR4; ATCC BAA-334 na latest Complete Genome Major Full 2008-07-03 ASM688v1 TIGR GCA_000006885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/885/GCF_000006885.1_ASM688v1/ na na na haploid bacteria 2160842 2160842 39.500000 1 1 1 NCBI RefSeq GCF_000006885.1-RS_2025_04_23 2025-04-23 2212 1967 73 11463916 GCF_000006905.1 PRJNA224116 SAMN02604005 na na 190650 155892 Caulobacter vibrioides CB15 strain=CB15 na latest Complete Genome Major Full 2002-03-06 ASM690v1 TIGR GCA_000006905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/905/GCF_000006905.1_ASM690v1/ na na na haploid bacteria 4016947 4016947 67.000000 1 1 1 NCBI RefSeq GCF_000006905.1-RS_2025_04_26 2025-04-26 4004 3823 61 11259647;16829582 GCF_000006925.2 PRJNA62907 SAMN02603599 na reference genome 198214 623 Shigella flexneri 2a str. 301 strain=301 na latest Complete Genome Major Full 2011-08-03 ASM692v2 Microbial Genome Center of ChMPH GCA_000006925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2/ na na na haploid bacteria 4828820 4828820 50.500000 2 2 2 NCBI RefSeq Annotation submitted by NCBI RefSeq 2016-08-24 4788 4313 129 12384590 GCF_000006945.2 PRJNA57799 SAMN02604315 na reference genome 99287 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 strain=LT2 na latest Complete Genome Major Full 2016-01-13 ASM694v2 Washington University Genome Sequencing Center GCA_000006945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/945/GCF_000006945.2_ASM694v2/ na assembly from type material na haploid bacteria 4951383 4951383 52.000000 2 2 2 NCBI RefSeq Annotation submitted by NCBI RefSeq 2022-09-08 4717 4554 118 11677609 GCF_000006965.1 PRJNA224116 SAMEA3283068 na na 266834 382 Sinorhizobium meliloti 1021 strain=1021 na latest Complete Genome Major Full 2003-05-06 ASM696v1 MELILO GCA_000006965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1/ na na na haploid bacteria 6691694 6691694 62.000000 3 3 3 NCBI RefSeq GCF_000006965.1-RS_2025_03_27 2025-03-27 6355 5988 68 11481430;11481431;11481432 GCF_000006985.1 PRJNA224116 SAMN02604006 na reference genome 194439 1097 Chlorobaculum tepidum TLS strain=TLS na latest Complete Genome Major Full 2002-07-02 ASM698v1 TIGR GCA_000006985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/985/GCF_000006985.1_ASM698v1/ na assembly from type material na haploid bacteria 2154946 2154946 56.500000 1 1 1 NCBI RefSeq GCF_000006985.1-RS_2024_12_09 2024-12-09 2094 1988 59 12093901 GCF_000007005.1 PRJNA224116 SAMN02603227 na na 273057 2287 Saccharolobus solfataricus P2 strain=P2 na latest Complete Genome Major Full 2002-11-25 ASM700v1 European/Canadian Consortium GCA_000007005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1/ na na na haploid archaea 2992245 2992245 36.000000 1 1 1 NCBI RefSeq GCF_000007005.1-RS_2025_04_01 2025-04-01 3222 2859 52 na GCF_000007025.1 PRJNA224116 SAMN02603141 na reference genome 272944 781 Rickettsia conorii str. Malish 7 strain=Malish 7 na latest Complete Genome Major Full 2002-11-25 ASM702v1 CNRS GCA_000007025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1/ na assembly from type material na haploid bacteria 1268755 1268755 32.500000 1 1 1 NCBI RefSeq GCF_000007025.1-RS_2025_01_08 2025-01-08 1468 1331 40 11030655;11557893 GCF_000007045.1 PRJNA224116 SAMN02603218 na na 171101 1313 Streptococcus pneumoniae R6 strain=R6 na latest Complete Genome Major Full 2002-11-25 ASM704v1 Eli Lilly and Company GCA_000007045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/045/GCF_000007045.1_ASM704v1/ na na na haploid bacteria 2038615 2038615 39.500000 1 1 1 NCBI RefSeq GCF_000007045.1-RS_2024_11_20 2024-11-20 2092 1856 73 11544234 GCF_000007065.1 PRJNA224116 SAMN02603290 na na 192952 2209 Methanosarcina mazei Go1 strain=Go1 na latest Complete Genome Major Full 2002-05-20 ASM706v1 Gottingen Genomics Laboratory GCA_000007065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/065/GCF_000007065.1_ASM706v1/ na na na haploid archaea 4096345 4096345 41.500000 1 1 1 NCBI RefSeq GCF_000007065.1-RS_2024_10_21 2024-10-21 3517 3373 68 12125824 GCF_000007085.1 PRJNA224116 SAMN02603009 na reference genome 273068 911092 Caldanaerobacter subterraneus subsp. tengcongensis MB4 strain=MB4 na latest Complete Genome Major Full 2002-05-14 ASM708v1 Beijing Center.HGP GCA_000007085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1/ na assembly from type material na haploid bacteria 2689445 2689445 37.500000 1 1 1 NCBI RefSeq GCF_000007085.1-RS_2024_12_09 2024-12-09 2728 2548 73 11997336 GCF_000007105.1 PRJNA224116 SAMN02603579 na na 264203 542 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 strain=ZM4 na latest Complete Genome Major Full 2010-01-12 ASM710v1 Macrogen Inc. GCA_000007105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1/ na na na haploid bacteria 2056363 2056363 46.500000 1 1 1 NCBI RefSeq GCF_000007105.1-RS_2025_04_01 2025-04-01 1814 1734 63 15592456;19816441 GCF_000007125.1 PRJNA224116 SAMN02603416 na reference genome 224914 29459 Brucella melitensis bv. 1 str. 16M strain=16M na latest Complete Genome Major Full 2001-12-28 ASM712v1 Integrated Genomics GCA_000007125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/125/GCF_000007125.1_ASM712v1/ na assembly from type material na haploid bacteria 3294931 3294931 57.000000 2 2 2 NCBI RefSeq GCF_000007125.1-RS_2025_04_15 2025-04-15 3234 2941 67 11756688 GCF_000007145.1 PRJNA224116 SAMN02603845 na na 190485 339 Xanthomonas campestris pv. campestris str. ATCC 33913 strain=ATCC 33913 na latest Complete Genome Major Full 2002-05-24 ASM714v1 Sao Paulo state (Brazil) Consortium GCA_000007145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1/ na assembly from type material na haploid bacteria 5076188 5076188 65.000000 1 1 1 NCBI RefSeq GCF_000007145.1-RS_2025_05_06 2025-05-06 4429 4135 153 12024217 GCF_000007165.1 PRJNA224116 SAMN02603846 na na 1203463 346 Xanthomonas citri subsp. citri 306 strain=306 na latest Complete Genome Major Full 2002-05-29 ASM716v1 Sao Paulo state (Brazil) Consortium GCA_000007165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/165/GCF_000007165.1_ASM716v1/ na na na haploid bacteria 5274174 5274174 64.500000 3 3 3 NCBI RefSeq GCF_000007165.1-RS_2025_05_06 2025-05-06 4564 4271 99 12024217;15774874 GCF_000007185.1 PRJNA224116 SAMN02603235 na reference genome 190192 2320 Methanopyrus kandleri AV19 strain=AV19 na latest Complete Genome Major Full 2002-04-03 ASM718v1 Fidelity Systems GCA_000007185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/185/GCF_000007185.1_ASM718v1/ na assembly from type material na haploid archaea 1694969 1694969 61.000000 1 1 1 NCBI RefSeq GCF_000007185.1-RS_2024_10_21 2024-10-21 1835 1778 40 11930014 GCF_000007205.1 PRJNA224116 SAMN02602979 na reference genome 182082 83558 Chlamydia pneumoniae TW-183 strain=TW-183 na latest Complete Genome Major Full 2003-07-25 ASM720v1 ALTANA Pharma GCA_000007205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1/ na assembly from type material na haploid bacteria 1225935 1225935 40.500000 1 1 1 NCBI RefSeq GCF_000007205.1-RS_2025_03_28 2025-03-28 1093 1039 44 na GCF_000007225.1 PRJNA224116 SAMN02604075 na reference genome 178306 13773 Pyrobaculum aerophilum str. IM2 strain=IM2 na latest Complete Genome Major Full 2002-01-24 ASM722v1 UCLA/CalTech GCA_000007225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/225/GCF_000007225.1_ASM722v1/ na assembly from type material na haploid archaea 2222430 2222430 51.500000 1 1 1 NCBI RefSeq GCF_000007225.1-RS_2024_12_16 2024-12-16 2642 2563 49 11792869 GCF_000007245.1 PRJNA224116 SAMN02603844 na na 183190 2371 Xylella fastidiosa Temecula1 strain=Temecula1 na latest Complete Genome Major Full 2003-01-29 ASM724v1 Sao Paulo state (Brazil) Consortium GCA_000007245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/245/GCF_000007245.1_ASM724v1/ na na na haploid bacteria 2521148 2521148 52.000000 2 2 2 NCBI RefSeq GCF_000007245.1-RS_2025_05_05 2025-05-05 2267 2151 59 12533478 GCF_000007265.1 PRJNA224116 SAMN02604013 na na 208435 1311 Streptococcus agalactiae 2603V/R strain=2603V/R na latest Complete Genome Major Full 2002-08-28 ASM726v1 TIGR GCA_000007265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1/ na na na haploid bacteria 2160267 2160267 35.500000 1 1 1 NCBI RefSeq GCF_000007265.1-RS_2024_11_20 2024-11-20 2221 2053 104 12200547 GCF_000007285.1 PRJNA224116 SAMN02603495 na na 186103 1314 Streptococcus pyogenes MGAS8232 strain=MGAS8232 na latest Complete Genome Major Full 2002-04-03 ASM728v1 Lab of Human Bacterial Pathogenesis GCA_000007285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/285/GCF_000007285.1_ASM728v1/ na na na haploid bacteria 1895017 1895017 38.500000 1 1 1 NCBI RefSeq GCF_000007285.1-RS_2024_12_01 2024-12-01 1969 1815 89 11917108 GCF_000007305.1 PRJNA224116 SAMN02604284 na na 186497 2261 Pyrococcus furiosus DSM 3638 strain=DSM 3638 na latest Complete Genome Major Full 2002-02-27 ASM730v1 Utah Genome Center GCA_000007305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1/ na assembly from type material na haploid archaea 1908256 1908256 41.000000 1 1 1 NCBI RefSeq GCF_000007305.1-RS_2024_10_21 2024-10-21 2147 2025 68 10430560;11115105;11210495 GCF_000007345.1 PRJNA224116 SAMN03081414 na reference genome 188937 2214 Methanosarcina acetivorans C2A strain=C2A na latest Complete Genome Major Full 2002-04-03 ASM734v1 Broad Institute GCA_000007345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1/ na assembly from type material na haploid archaea 5751492 5751492 42.500000 1 1 1 NCBI RefSeq GCF_000007345.1-RS_2024_10_21 2024-10-21 4933 4702 68 11932238 GCF_000007365.1 PRJNA224116 SAMN02604269 na reference genome 198804 9 Buchnera aphidicola str. Sg (Schizaphis graminum) strain=Sg (ex Schizaphis graminum) na latest Complete Genome Major Full 2002-07-02 ASM736v1 Uppsala Univ. GCA_000007365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/365/GCF_000007365.1_ASM736v1/ na assembly from type material na haploid bacteria 641454 641454 25.500000 1 1 1 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2023-08-12 630 568 38 12089438 GCF_000007405.1 PRJNA224116 SAMN02604096 na na 198215 623 Shigella flexneri 2a str. 2457T strain=2457T na latest Complete Genome Major Full 2003-04-22 ASM740v1 Univ. Wisconsin GCA_000007405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/405/GCF_000007405.1_ASM740v1/ na na na haploid bacteria 4599354 4599354 51.000000 1 1 1 NCBI RefSeq GCF_000007405.1-RS_2025_05_29 2025-05-29 4638 3834 130 12704152 GCF_000007425.1 PRJNA224116 SAMN02603496 na na 198466 1314 Streptococcus pyogenes MGAS315 strain=MGAS315 na latest Complete Genome Major Full 2002-07-18 ASM742v1 Lab of Human Bacterial Pathogenesis GCA_000007425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/425/GCF_000007425.1_ASM742v1/ na na na haploid bacteria 1900521 1900521 38.500000 1 1 1 NCBI RefSeq GCF_000007425.1-RS_2025_01_03 2025-01-03 1973 1818 89 12122206 GCF_000007445.1 PRJNA224116 SAMN02604094 na na 199310 562 Escherichia coli CFT073 strain=CFT073 na latest Complete Genome Major Full 2002-12-06 ASM744v1 Univ. Wisconsin GCA_000007445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/445/GCF_000007445.1_ASM744v1/ na na na haploid bacteria 5231428 5231428 50.500000 1 1 1 NCBI RefSeq GCF_000007445.1-RS_2025_06_09 2025-06-09 5109 4684 114 12471157 GCF_000007465.2 PRJNA224116 SAMN02604090 na na 210007 1309 Streptococcus mutans UA159 strain=UA159 na latest Complete Genome Major Full 2011-09-01 ASM746v2 Univ. Oklahoma GCA_000007465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2/ na na na haploid bacteria 2032925 2032925 37.000000 1 1 1 NCBI RefSeq GCF_000007465.2-RS_2024_08_08 2024-08-08 2008 1863 84 12397186 GCF_000007485.1 PRJNA224116 SAMN02603248 na na 203267 2039 Tropheryma whipplei str. Twist strain=Twist na latest Complete Genome Major Full 2003-02-24 ASM748v1 Genoscope GCA_000007485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/485/GCF_000007485.1_ASM748v1/ na assembly from type material na haploid bacteria 927303 927303 46.500000 1 1 1 NCBI RefSeq GCF_000007485.1-RS_2025_01_13 2025-01-13 904 841 56 12902375 GCF_000007505.1 PRJNA224116 SAMN02603682 na reference genome 204722 29461 Brucella suis 1330 strain=1330 na latest Complete Genome Major Full 2004-10-13 ASM750v1 NITE/TIGR GCA_000007505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/505/GCF_000007505.1_ASM750v1/ na assembly from type material na haploid bacteria 3315175 3315175 57.500000 2 2 2 NCBI RefSeq GCF_000007505.1-RS_2024_08_07 2024-08-07 3233 3031 68 12271122 GCF_000007525.1 PRJNA224116 SAMN02603675 na na 206672 216816 Bifidobacterium longum NCC2705 strain=NCC2705 na latest Complete Genome Major Full 2005-01-21 ASM752v1 Nestle Research Center, Switzerland GCA_000007525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1/ na na na haploid bacteria 2260266 2260266 60.000000 2 2 2 NCBI RefSeq GCF_000007525.1-RS_2024_11_27 2024-11-27 1908 1787 71 12381787 GCF_000007545.1 PRJNA224116 SAMN02604095 na na 209261 28901 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 strain=Ty2 na latest Complete Genome Major Full 2003-03-21 ASM754v1 Univ. Wisconsin GCA_000007545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/545/GCF_000007545.1_ASM754v1/ na assembly from heterotypic synonym type material na haploid bacteria 4791961 4791961 52.000000 1 1 1 NCBI RefSeq GCF_000007545.1-RS_2024_06_26 2024-06-26 4707 4280 111 12644504 GCF_000007585.1 PRJNA224116 SAMN02603720 na na 242619 837 Porphyromonas gingivalis W83 strain=W83 na latest Complete Genome Major Full 2003-09-02 ASM758v1 Porphyromonas gingivalis Genome Project GCA_000007585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/585/GCF_000007585.1_ASM758v1/ na na na haploid bacteria 2343476 2343476 48.500000 1 1 1 NCBI RefSeq GCF_000007585.1-RS_2024_10_23 2024-10-23 2082 1938 67 12949112 GCF_000007605.1 PRJNA224116 SAMN02603993 na reference genome 227941 83557 Chlamydia caviae GPIC na GPIC latest Complete Genome Major Full 2003-04-14 ASM760v1 TIGR GCA_000007605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/605/GCF_000007605.1_ASM760v1/ na assembly from type material na haploid bacteria 1181356 1181356 39.000000 2 2 2 NCBI RefSeq GCF_000007605.1-RS_2025_03_27 2025-03-27 1043 994 44 12682364 GCF_000007625.1 PRJNA224116 SAMN02603289 na reference genome 212717 1513 Clostridium tetani E88 strain=Massachusetts substr. E88 na latest Complete Genome Major Full 2003-02-04 ASM762v1 Gottingen Genomics Laboratory GCA_000007625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1/ na na na haploid bacteria 2873333 2873333 28.500000 2 2 2 NCBI RefSeq GCF_000007625.1-RS_2025_04_01 2025-04-01 2865 2752 76 12552129 GCF_000007645.1 PRJNA224116 SAMN02603126 na na 176280 1282 Staphylococcus epidermidis ATCC 12228 strain=ATCC 12228 na latest Complete Genome Major Full 2002-12-20 ASM764v1 Chinese National HGC, Shanghai GCA_000007645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1/ na na na haploid bacteria 2564615 2564615 32.000000 7 7 7 NCBI RefSeq GCF_000007645.1-RS_2025_03_27 2025-03-27 2447 2288 81 12950922 GCF_000007665.1 PRJNA224116 SAMN02603772 na na 281090 1575 Leifsonia xyli subsp. xyli str. CTCB07 strain=CTCB07 na latest Complete Genome Major Full 2004-08-04 ASM766v1 Sao Paulo state (Brazil) Consortium GCA_000007665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/665/GCF_000007665.1_ASM766v1/ na na na haploid bacteria 2584158 2584158 67.500000 1 1 1 NCBI RefSeq GCF_000007665.1-RS_2024_08_17 2024-08-17 2716 2405 51 15305603 GCF_000007685.1 PRJNA224116 SAMN02603847 na na 267671 173 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 strain=Fiocruz L1-130 na latest Complete Genome Major Full 2004-03-22 ASM768v1 Sao Paulo state (Brazil) Consortium GCA_000007685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/685/GCF_000007685.1_ASM768v1/ na na na haploid bacteria 4627366 4627366 35.000000 2 2 2 NCBI RefSeq GCF_000007685.1-RS_2025_06_11 2025-06-11 3770 3599 44 15028702 GCF_000007705.1 PRJNA224116 SAMN02603528 na reference genome 243365 536 Chromobacterium violaceum ATCC 12472 strain=ATCC 12472 na latest Complete Genome Major Full 2003-08-22 ASM770v1 LNCC, Brazil GCA_000007705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1/ na assembly from type material na haploid bacteria 4751080 4751080 65.000000 1 1 1 NCBI RefSeq GCF_000007705.1-RS_2024_12_02 2024-12-02 4493 4340 128 14500782 GCF_000007725.1 PRJNA224116 SAMN02604289 na na 224915 9 Buchnera aphidicola str. Bp (Baizongia pistaciae) strain=Bp (Baizongia pistaciae) na latest Complete Genome Major Full 2003-01-27 ASM772v1 Valencia Univ. GCA_000007725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/725/GCF_000007725.1_ASM772v1/ na na na haploid bacteria 618379 618379 25.500000 2 2 2 NCBI RefSeq GCF_000007725.1-RS_2025_02_20 2025-02-20 561 517 38 12522265 GCF_000007745.1 PRJNA224116 SAMN02603473 na reference genome 221988 157673 [Mannheimia] succiniciproducens MBEL55E strain=MBEL55E na latest Complete Genome Major Full 2004-09-17 ASM774v1 Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu GCA_000007745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/745/GCF_000007745.1_ASM774v1/ na assembly from type material na haploid bacteria 2314078 2314078 42.500000 1 1 1 NCBI RefSeq GCF_000007745.1-RS_2024_11_26 2024-11-26 2192 2080 82 15378067 GCF_000007765.2 PRJNA57631 SAMN02603970 na reference genome 227377 777 Coxiella burnetii RSA 493 strain=RSA 493 na latest Complete Genome Major Full 2016-11-10 ASM776v2 TIGR GCA_000007765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/765/GCF_000007765.2_ASM776v2/ na na na haploid bacteria 2032807 2032807 42.500000 2 2 2 NCBI RefSeq Annotation submitted by NCBI RefSeq 2017-10-04 2085 1833 45 12704232;19047403 GCF_000007785.1 PRJNA224116 SAMN02603978 na na 226185 1351 Enterococcus faecalis V583 strain=V583 na latest Complete Genome Major Full 2003-03-28 ASM778v1 TIGR GCA_000007785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1/ na na na haploid bacteria 3359974 3359974 37.500000 4 4 4 NCBI RefSeq GCF_000007785.1-RS_2025_04_15 2025-04-15 3352 3191 83 12663927 GCF_000007805.1 PRJNA224116 SAMN02604017 na reference genome 223283 251701 Pseudomonas syringae pv. tomato str. DC3000 strain=DC3000 na latest Complete Genome Major Full 2003-03-05 ASM780v1 TIGR GCA_000007805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1/ na assembly from type material na haploid bacteria 6538260 6538260 58.500000 3 3 3 NCBI RefSeq GCF_000007805.1-RS_2024_08_08 2024-08-08 5933 5610 83 12928499 GCF_000007825.1 PRJNA224116 SAMN02603340 na na 226900 1396 Bacillus cereus ATCC 14579 strain=ATCC 14579 na latest Complete Genome Major Full 2003-04-16 ASM782v1 INRA GCA_000007825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1/ na assembly from type material na haploid bacteria 5427083 5427083 35.500000 2 2 2 NCBI RefSeq GCF_000007825.1-RS_2025_06_11 2025-06-11 5611 5117 150 12721630;14617663 GCF_000007845.1 PRJNA224116 SAMN02603432 na na 198094 1392 Bacillus anthracis str. Ames strain=Ames na latest Complete Genome Major Full 2003-04-30 ASM784v1 J. Craig Venter Institute GCA_000007845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1/ na na na haploid bacteria 5227293 5227293 35.500000 1 1 1 NCBI RefSeq GCF_000007845.1-RS_2025_04_10 2025-04-10 5502 5015 133 12721629 GCF_000007865.1 PRJNA224116 SAMN02604086 na na 262316 1764 Mycobacterium avium subsp. paratuberculosis K-10 strain=K-10 na latest Complete Genome Major Full 2004-01-30 ASM786v1 Univ. Minnesota GCA_000007865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1/ na na na haploid bacteria 4829781 4829781 69.500000 1 1 1 NCBI RefSeq GCF_000007865.1-RS_2025_03_20 2025-03-20 4574 4287 53 16116077 GCF_000007885.1 PRJNA224116 SAMN02602970 na na 229193 632 Yersinia pestis biovar Microtus str. 91001 strain=91001 na latest Complete Genome Major Full 2004-03-15 ASM788v1 Academy of Military Medical Sciences, The Institute of Microbiology and Epidemiology, China GCA_000007885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/885/GCF_000007885.1_ASM788v1/ na na na haploid bacteria 4803217 4803217 47.500000 5 5 5 NCBI RefSeq GCF_000007885.1-RS_2025_03_03 2025-03-03 4377 4044 104 15262951;15368893 GCF_000007905.1 PRJNA224116 SAMN02604097 na reference genome 235279 32025 Helicobacter hepaticus ATCC 51449 strain=ATCC 51449 na latest Complete Genome Major Full 2003-06-26 ASM790v1 Univ. Wuerzburg GCA_000007905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1/ na na na haploid bacteria 1799146 1799146 36.000000 1 1 1 NCBI RefSeq GCF_000007905.1-RS_2025_06_17 2025-06-17 1858 1799 44 12810954 GCF_000007925.1 PRJNA224116 SAMN02603142 na na 167539 1219 Prochlorococcus marinus subsp. marinus str. CCMP1375 strain=CCMP1375; SS120 na latest Complete Genome Major Full 2003-07-25 ASM792v1 CNRS GCA_000007925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/925/GCF_000007925.1_ASM792v1/ na assembly from type material na haploid bacteria 1751080 1751080 36.500000 1 1 1 NCBI RefSeq GCF_000007925.1-RS_2025_04_10 2025-04-10 1911 1859 45 12917486 GCF_000007945.1 PRJNA224116 SAMN02604087 na na 233412 730 [Haemophilus] ducreyi 35000HP strain=35000HP na latest Complete Genome Major Full 2003-07-23 ASM794v1 Univ. Ohio GCA_000007945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1/ na na na haploid bacteria 1698955 1698955 38.000000 1 1 1 NCBI RefSeq GCF_000007945.1-RS_2025_04_01 2025-04-01 1695 1539 71 na GCF_000007985.2 PRJNA224116 SAMN02603989 na reference genome 243231 35554 Geobacter sulfurreducens PCA strain=PCA na latest Complete Genome Major Full 2012-07-31 ASM798v2 TIGR GCA_000007985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2/ na assembly from type material na haploid bacteria 3814128 3814128 61.000000 1 1 1 NCBI RefSeq GCF_000007985.2-RS_2024_08_06 2024-08-06 3484 3405 58 14671304;22967216 GCF_000008045.1 PRJNA224116 SAMN02603327 na reference genome 257363 785 Rickettsia typhi str. Wilmington strain=Wilmington na latest Complete Genome Major Full 2004-08-19 ASM804v1 Human Genome Sequencing Center, Baylor College of Medicine GCA_000008045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/045/GCF_000008045.1_ASM804v1/ na assembly from type material na haploid bacteria 1111496 1111496 29.000000 1 1 1 NCBI RefSeq GCF_000008045.1-RS_2025_01_08 2025-01-08 877 805 40 15317790 GCF_000008065.1 PRJNA224116 SAMN02603676 na na 257314 33959 Lactobacillus johnsonii NCC 533 strain=NCC 533 na latest Complete Genome Major Full 2004-02-02 ASM806v1 Nestle Research Center, Switzerland GCA_000008065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/065/GCF_000008065.1_ASM806v1/ na na na haploid bacteria 1992676 1992676 34.500000 1 1 1 NCBI RefSeq GCF_000008065.1-RS_2025_05_21 2025-05-21 1926 1775 99 14983040;15006820 GCF_000008105.1 PRJNA224116 SAMN02603109 na na 321314 28901 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 strain=SC-B67 na latest Complete Genome Major Full 2005-04-01 ASM810v1 Chang Gung Genomic Medical Center, Chang Gung Memorial Hospital GCA_000008105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/105/GCF_000008105.1_ASM810v1/ na na na haploid bacteria 4944000 4944000 52.000000 3 3 3 NCBI RefSeq GCF_000008105.1-RS_2025_03_23 2025-03-23 4906 4414 117 15781495;16257053 GCF_000008125.1 PRJNA224116 SAMN02603291 na na 262724 274 Thermus thermophilus HB27 strain=HB27 na latest Complete Genome Major Full 2004-04-05 ASM812v1 Gottingen Genomics Laboratory GCA_000008125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/125/GCF_000008125.1_ASM812v1/ na na na haploid bacteria 2127482 2127482 69.500000 2 2 2 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2023-08-06 2290 2166 56 15064768 GCF_000008145.1 PRJNA224116 SAMN02604220 na na 262698 235 Brucella abortus bv. 1 str. 9-941 strain=9-941 na latest Complete Genome Major Full 2005-04-05 ASM814v1 University of Minnesota GCA_000008145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/145/GCF_000008145.1_ASM814v1/ na na na haploid bacteria 3286445 3286445 57.000000 2 2 2 NCBI RefSeq GCF_000008145.1-RS_2025_04_23 2025-04-23 3230 2982 68 15805518 GCF_000008165.1 PRJNA224116 SAMN02598266 na na 260799 1392 Bacillus anthracis str. Sterne strain=Sterne na latest Complete Genome Major Full 2004-06-24 ASM816v1 DOE Joint Genome Institute GCA_000008165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1/ na na na haploid bacteria 5228663 5228663 35.500000 1 1 1 NCBI RefSeq GCF_000008165.1-RS_2025_04_10 2025-04-10 5511 5035 133 na GCF_000008185.1 PRJNA224116 SAMN02603967 na reference genome 243275 158 Treponema denticola ATCC 35405 strain=ATCC 35405 na latest Complete Genome Major Full 2004-02-03 ASM818v1 TIGR GCA_000008185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1/ na assembly from type material na haploid bacteria 2843201 2843201 38.000000 1 1 1 NCBI RefSeq GCF_000008185.1-RS_2025_05_01 2025-05-01 2630 2545 53 15064399 GCF_000008205.1 PRJNA224116 SAMN02603526 na reference genome 262719 2099 Mesomycoplasma hyopneumoniae J strain=J na latest Complete Genome Major Full 2005-08-05 ASM820v1 LNCC - Laboratorio Nacional de Computacao Cientifica GCA_000008205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/205/GCF_000008205.1_ASM820v1/ na assembly from type material na haploid bacteria 897405 897405 28.500000 1 1 1 NCBI RefSeq GCF_000008205.1-RS_2024_12_13 2024-12-13 723 678 36 16077101 GCF_000008225.1 PRJNA224116 SAMN02603525 na na 262722 2099 Mesomycoplasma hyopneumoniae 7448 strain=7448 na latest Complete Genome Major Full 2005-08-08 ASM822v1 LNCC - Laboratorio Nacional de Computacao Cientifica GCA_000008225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/225/GCF_000008225.1_ASM822v1/ na na na haploid bacteria 920079 920079 28.500000 1 1 1 NCBI RefSeq GCF_000008225.1-RS_2025_02_25 2025-02-25 741 689 36 16077101 GCF_000008245.1 PRJNA224116 SAMN02603527 na na 262723 2109 Mycoplasmopsis synoviae 53 strain=53 na latest Complete Genome Major Full 2005-08-05 ASM824v1 LNCC - Laboratorio Nacional de Computacao Cientifica GCA_000008245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/245/GCF_000008245.1_ASM824v1/ na na na haploid bacteria 799476 799476 28.500000 1 1 1 NCBI RefSeq GCF_000008245.1-RS_2025_02_25 2025-02-25 734 673 44 16077101 GCF_000008265.1 PRJNA224116 SAMN02603345 na reference genome 1122961 46632 Picrophilus oshimae DSM 9789 strain=DSM 9790 na latest Complete Genome Major Full 2004-06-08 ASM826v1 Institut of Microbiology and Genetics, University of Goettingen GCA_000008265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/265/GCF_000008265.1_ASM826v1/ na assembly from heterotypic synonym type material na haploid archaea 1545895 1545895 36.000000 1 1 1 NCBI RefSeq GCF_000008265.1-RS_2024_10_21 2024-10-21 1637 1578 52 15184674 GCF_000008285.1 PRJNA224116 SAMN02603980 na na 265669 1639 Listeria monocytogenes serotype 4b str. F2365 strain=4b F2365 na latest Complete Genome Major Full 2005-12-07 ASM828v1 TIGR GCA_000008285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/285/GCF_000008285.1_ASM828v1/ na na na haploid bacteria 2905187 2905187 38.000000 1 1 1 NCBI RefSeq GCF_000008285.1-RS_2025_01_30 2025-01-30 2896 2773 89 15115801 GCF_000008305.1 PRJNA224116 SAMN03081416 na reference genome 265311 2151 Mesoplasma florum L1 strain=L1; ATCC 33453 na latest Complete Genome Major Full 2004-07-19 ASM830v1 Broad Institute GCA_000008305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/305/GCF_000008305.1_ASM830v1/ na assembly from type material na haploid bacteria 793224 793224 27.000000 1 1 1 NCBI RefSeq GCF_000008305.1-RS_2024_12_09 2024-12-09 726 688 38 na GCF_000008325.1 PRJNA224116 SAMN02603968 na reference genome 243233 414 Methylococcus capsulatus str. Bath strain=Bath na latest Complete Genome Major Full 2005-05-18 ASM832v1 TIGR GCA_000008325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1/ na na na haploid bacteria 3304561 3304561 63.500000 1 1 1 NCBI RefSeq GCF_000008325.1-RS_2025_03_28 2025-03-28 3100 3001 56 15383840 GCF_000008345.1 PRJNA224116 SAMN02603281 na na 267747 1747 Cutibacterium acnes KPA171202 strain=KPA171202 na latest Complete Genome Major Full 2004-07-30 ASM834v1 Goettingen Genomics Laboratory GCA_000008345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1/ na na na haploid bacteria 2560265 2560265 60.000000 1 1 1 NCBI RefSeq GCF_000008345.1-RS_2025_04_02 2025-04-02 2478 2339 58 15286373 GCF_000008365.1 PRJNA224116 SAMN03081417 na reference genome 267748 2118 Mycoplasma mobile 163K strain=163K na latest Complete Genome Major Full 2004-05-18 ASM836v1 Broad Institute GCA_000008365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/365/GCF_000008365.1_ASM836v1/ na assembly from type material na haploid bacteria 777079 777079 25.000000 1 1 1 NCBI RefSeq GCF_000008365.1-RS_2024_12_13 2024-12-13 694 656 34 15289470 GCF_000008385.1 PRJNA224116 SAMN02603678 na reference genome 292805 80849 Wolbachia endosymbiont strain TRS of Brugia malayi na wBm latest Complete Genome Major Full 2005-02-02 ASM838v1 New England Biolabs, Inc. GCA_000008385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/385/GCF_000008385.1_ASM838v1/ na na na haploid bacteria 1080084 1080084 34.000000 1 1 1 NCBI RefSeq GCF_000008385.1-RS_2025_01_08 2025-01-08 1074 977 41 15780005 GCF_000008405.1 PRJNA224116 SAMN02603423 na na 295358 2099 Mesomycoplasma hyopneumoniae 232 strain=232 na latest Complete Genome Major Full 2004-10-08 ASM840v1 Iowa State University GCA_000008405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/405/GCF_000008405.1_ASM840v1/ na na na haploid bacteria 892758 892758 28.500000 1 1 1 NCBI RefSeq GCF_000008405.1-RS_2025_02_25 2025-02-25 723 677 36 15489423 GCF_000008425.1 PRJNA224116 SAMN02603292 na na 279010 1402 Bacillus licheniformis DSM 13 = ATCC 14580 strain=DSM 13 na latest Complete Genome Major Full 2004-09-20 ASM842v1 Gottingen Genomics Laboratory GCA_000008425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/425/GCF_000008425.1_ASM842v1/ na assembly from type material na haploid bacteria 4222645 4222645 46.000000 1 1 1 NCBI RefSeq GCF_000008425.1-RS_2025_03_02 2025-03-02 4376 4177 98 15383718 GCF_000008445.1 PRJNA224116 SAMN02603433 na reference genome 261594 1392 Bacillus anthracis str. 'Ames Ancestor' strain=Ames Ancestor; A2084 na latest Complete Genome Major Full 2004-07-09 ASM844v1 J. Craig Venter Institute GCA_000008445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/445/GCF_000008445.1_ASM844v1/ na na na haploid bacteria 5503926 5503926 35.000000 3 3 3 NCBI RefSeq GCF_000008445.1-RS_2025_03_27 2025-03-27 5763 5234 133 18952800 GCF_000008465.1 PRJNA224116 SAMN02604184 na reference genome 283942 135577 Idiomarina loihiensis L2TR strain=L2TR na latest Complete Genome Major Full 2004-12-02 ASM846v1 University of Hawaii at Manoa GCA_000008465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1/ na assembly from type material na haploid bacteria 2839318 2839318 47.000000 1 1 1 NCBI RefSeq GCF_000008465.1-RS_2025_02_09 2025-02-09 2723 2639 72 15596722 GCF_000008485.1 PRJNA224116 SAMN02603156 na na 272624 446 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 strain=Philadelphia 1 na latest Complete Genome Major Full 2004-09-24 ASM848v1 Columbia Genome Center GCA_000008485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/485/GCF_000008485.1_ASM848v1/ na assembly from type material na haploid bacteria 3397754 3397754 38.500000 1 1 1 NCBI RefSeq GCF_000008485.1-RS_2025_04_23 2025-04-23 3056 2976 57 15448271 GCF_000008505.1 PRJNA224116 SAMN02598265 na na 281309 1428 [Bacillus thuringiensis] serovar konkukian str. 97-27 strain=97-27 na latest Complete Genome Major Full 2004-06-28 ASM850v1 DOE Joint Genome Institute GCA_000008505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1/ na na na haploid bacteria 5314794 5314794 35.500000 2 2 2 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2023-09-11 5545 5235 152 16621833 GCF_000008545.1 PRJNA224116 SAMN02603986 na na 243274 2336 Thermotoga maritima MSB8 strain=MSB8 na latest Complete Genome Major Full 2001-01-09 ASM854v1 TIGR GCA_000008545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1/ na assembly from type material na haploid bacteria 1860725 1860725 46.000000 1 1 1 NCBI RefSeq GCF_000008545.1-RS_2025_04_23 2025-04-23 1923 1846 52 10360571 GCF_000008565.1 PRJNA224116 SAMN02603976 na na 243230 1299 Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain=R1 na latest Complete Genome Major Full 2000-12-11 ASM856v1 TIGR GCA_000008565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1/ na assembly from type material na haploid bacteria 3284156 3284156 66.500000 4 4 4 NCBI RefSeq GCF_000008565.1-RS_2025_04_01 2025-04-01 3304 3159 62 10567266 GCF_000008585.1 PRJNA224116 SAMN02603992 na na 83331 1773 Mycobacterium tuberculosis CDC1551 strain=CDC1551 na latest Complete Genome Major Full 2004-08-04 ASM858v1 TIGR GCA_000008585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/585/GCF_000008585.1_ASM858v1/ na na na haploid bacteria 4403837 4403837 65.500000 1 1 1 NCBI RefSeq GCF_000008585.1-RS_2025_06_28 2025-06-28 4161 3859 51 12218036 GCF_000008605.1 PRJNA224116 SAMN02604348 na na 243276 160 Treponema pallidum subsp. pallidum str. Nichols strain=Nichols na latest Complete Genome Major Full 1999-12-22 ASM860v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000008605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/605/GCF_000008605.1_ASM860v1/ na assembly from type material na haploid bacteria 1138011 1138011 53.000000 1 1 1 NCBI RefSeq GCF_000008605.1-RS_2025_03_02 2025-03-02 1062 986 54 9665876 GCF_000008625.1 PRJNA224116 SAMN02603207 na reference genome 224324 63363 Aquifex aeolicus VF5 strain=VF5 na latest Complete Genome Major Full 1999-12-22 ASM862v1 DIVERSA GCA_000008625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1/ na assembly from type material na haploid bacteria 1590791 1590791 43.500000 2 2 2 NCBI RefSeq GCF_000008625.1-RS_2025_05_05 2025-05-05 1826 1743 52 9537320 GCF_000008645.1 PRJNA224116 SAMN02603244 na na 187420 145262 Methanothermobacter thermautotrophicus str. Delta H strain=Delta H na latest Complete Genome Major Full 1999-12-22 ASM864v1 Genome Therapeutics Corporation GCA_000008645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1/ na assembly from type material na haploid archaea 1751377 1751377 49.500000 1 1 1 NCBI RefSeq GCF_000008645.1-RS_2024_10_21 2024-10-21 1903 1802 48 9371463 GCF_000008665.1 PRJNA224116 SAMN02603985 na reference genome 224325 2234 Archaeoglobus fulgidus DSM 4304 strain=DSM 4304 na latest Complete Genome Major Full 1999-12-22 ASM866v1 TIGR GCA_000008665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/665/GCF_000008665.1_ASM866v1/ na assembly from type material na haploid archaea 2178400 2178400 48.500000 1 1 1 NCBI RefSeq GCF_000008665.1-RS_2024_10_21 2024-10-21 2563 2472 51 9389475 GCF_000008685.2 PRJNA224116 SAMN02603966 na na 224326 139 Borreliella burgdorferi B31 strain=B31 na latest Complete Genome Major Full 2011-11-09 ASM868v2 TIGR GCA_000008685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2/ na assembly from type material na haploid bacteria 1521208 1521208 28.000000 22 22 22 NCBI RefSeq GCF_000008685.2-RS_2026_04_23 2026-04-23 1568 1456 40 9403685;10672174 GCF_000008725.1 PRJNA57637 SAMN02603114 na reference genome 272561 813 Chlamydia trachomatis D/UW-3/CX strain=D/UW-3/CX na latest Complete Genome Major Full 2001-01-09 ASM872v1 ChGP GCA_000008725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/725/GCF_000008725.1_ASM872v1/ na na na haploid bacteria 1042519 1042519 41.500000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2016-08-03 935 887 45 9784136 GCF_000008745.1 PRJNA224116 SAMN02603115 na na 115713 83558 Chlamydia pneumoniae CWL029 strain=CWL029 na latest Complete Genome Major Full 1999-12-22 ASM874v1 ChGP GCA_000008745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1/ na na na haploid bacteria 1230230 1230230 40.500000 1 1 1 NCBI RefSeq GCF_000008745.1-RS_2024_11_20 2024-11-20 1096 1037 44 10192388 GCF_000008765.1 PRJNA224116 SAMN02603243 na na 272562 1488 Clostridium acetobutylicum ATCC 824 strain=ATCC 824 na latest Complete Genome Major Full 2002-11-22 ASM876v1 Genome Therapeutics GCA_000008765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1/ na assembly from type material na haploid bacteria 4132880 4132880 31.000000 2 2 2 NCBI RefSeq GCF_000008765.1-RS_2025_04_10 2025-04-10 3992 3836 112 11466286 GCF_000008785.1 PRJNA224116 SAMN02602990 na na 85963 210 Helicobacter pylori J99 strain=J99 na latest Complete Genome Major Full 2001-01-09 ASM878v1 ASTRA GCA_000008785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/785/GCF_000008785.1_ASM878v1/ na na na haploid bacteria 1643831 1643831 39.000000 1 1 1 NCBI RefSeq GCF_000008785.1-RS_2025_04_23 2025-04-23 1575 1458 45 9923682 GCF_000008805.1 PRJNA224116 SAMN02603997 na na 122586 487 Neisseria meningitidis MC58 strain=MC58 na latest Complete Genome Major Full 2005-05-26 ASM880v1 TIGR GCA_000008805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1/ na na na haploid bacteria 2272360 2272360 51.500000 1 1 1 NCBI RefSeq GCF_000008805.1-RS_2025_01_06 2025-01-06 2266 2001 75 10710307 GCF_000008865.2 PRJNA57781 SAMN01911278 na reference genome 386585 562 Escherichia coli O157:H7 str. Sakai strain=Sakai substr. RIMD 0509952 na latest Complete Genome Major Full 2018-06-08 ASM886v2 GIRC GCA_000008865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.2_ASM886v2/ na na na haploid bacteria 5594605 5594605 50.500000 3 3 3 NCBI RefSeq Annotation submitted by NCBI RefSeq 2021-02-12 5417 5155 126 9628576;10734605;11108008;11111050;11258796 GCF_000008925.1 PRJNA224116 SAMN02604111 na na 362948 1624 Ligilactobacillus salivarius UCC118 strain=UCC118 na latest Complete Genome Major Full 2006-03-30 ASM892v1 University College Cork GCA_000008925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1/ na na na haploid bacteria 2133977 2133977 33.000000 4 4 4 NCBI RefSeq GCF_000008925.1-RS_2024_09_10 2024-09-10 2182 2017 101 16617113;18390685 GCF_000008945.1 PRJNA224116 SAMN02603512 na na 205913 216816 Bifidobacterium longum DJO10A strain=DJO10A na latest Complete Genome Major Full 2008-06-05 ASM894v1 Lactic Acid Bacteria Genome Consortium GCA_000008945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/945/GCF_000008945.1_ASM894v1/ na na na haploid bacteria 2389526 2389526 60.000000 3 3 3 NCBI RefSeq GCF_000008945.1-RS_2025_03_27 2025-03-27 2044 1903 74 16391088;18505588 GCF_000008985.1 PRJNA224116 SAMEA3138185 na na 177416 263 Francisella tularensis subsp. tularensis SCHU S4 strain=SCHU S4 na latest Complete Genome Major Full 2009-06-18 ASM898v1 Swedish Defence Research Agency GCA_000008985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/985/GCF_000008985.1_ASM898v1/ na na na haploid bacteria 1892775 1892775 32.500000 1 1 1 NCBI RefSeq GCF_000008985.1-RS_2025_02_10 2025-02-10 1941 1723 52 15640799 GCF_000009005.1 PRJNA224116 SAMEA3138186 na na 273036 1280 Staphylococcus aureus RF122 strain=RF122 na latest Complete Genome Major Full 2005-11-24 ASM900v1 Univ. Minnesota GCA_000009005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/005/GCF_000009005.1_ASM900v1/ na na na haploid bacteria 2742531 2742531 33.000000 1 1 1 NCBI RefSeq GCF_000009005.1-RS_2025_05_23 2025-05-23 2754 2487 79 17971880 GCF_000009025.1 PRJNA224116 SAMEA3138187 na na 255470 61435 Dehalococcoides mccartyi CBDB1 strain=CBDB1 na latest Complete Genome Major Full 2005-08-19 ASM902v1 Max Planck Institute GCA_000009025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/025/GCF_000009025.1_ASM902v1/ na na na haploid bacteria 1395502 1395502 47.000000 1 1 1 NCBI RefSeq GCF_000009025.1-RS_2025_03_18 2025-03-18 1488 1430 52 16116419 GCF_000009045.1 PRJNA76 SAMEA3138188 na reference genome 224308 1423 Bacillus subtilis subsp. subtilis str. 168 strain=168 na latest Complete Genome Major Full 2009-03-17 ASM904v1 BSNR GCA_000009045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/045/GCF_000009045.1_ASM904v1/ na assembly from type material na haploid bacteria 4215606 4215606 43.500000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2021-02-12 4536 4237 211 9384377;11918817;12682299;19383706;23429746;29280348;37002859 GCF_000009065.1 PRJNA224116 SAMEA1705942 na reference genome 214092 632 Yersinia pestis CO92 strain=CO92 na latest Complete Genome Major Full 2003-05-06 ASM906v1 Sanger Institute GCA_000009065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1/ na na na haploid bacteria 4829855 4829855 47.500000 4 4 4 NCBI RefSeq GCF_000009065.1-RS_2025_06_03 2025-06-03 4411 4094 100 11274119;11586360;12834539 GCF_000009085.1 PRJNA57587 SAMEA1705929 na reference genome 192222 197 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 strain=NCTC 11168 na latest Complete Genome Major Full 2003-05-06 ASM908v1 Sanger Institute GCA_000009085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/085/GCF_000009085.1_ASM908v1/ na na na haploid bacteria 1641481 1641481 30.500000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2022-07-18 1668 1572 56 10688204;17565669 GCF_000009105.1 PRJNA224116 SAMEA1705949 na na 122587 487 Neisseria meningitidis Z2491 strain=Z2491 na latest Complete Genome Major Full 2003-05-06 ASM910v1 Sanger Institute GCA_000009105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/105/GCF_000009105.1_ASM910v1/ na na na haploid bacteria 2184406 2184406 52.000000 1 1 1 NCBI RefSeq GCF_000009105.1-RS_2025_02_10 2025-02-10 2209 1964 74 10761919 GCF_000009125.1 PRJNA224116 SAMEA3138192 na na 267608 1310165 Ralstonia pseudosolanacearum GMI1000 strain=GMI1000 na latest Complete Genome Major Full 2003-05-06 ASM912v1 Genoscope GCA_000009125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1/ na assembly from type material na haploid bacteria 5810922 5810922 67.000000 2 2 2 NCBI RefSeq GCF_000009125.1-RS_2024_09_22 2024-09-22 5199 5001 75 11823852 GCF_000009145.1 PRJNA224116 SAMEA3138193 na na 228410 915 Nitrosomonas europaea ATCC 19718 strain=ATCC 19718 na latest Complete Genome Major Full 2003-05-06 ASM914v1 DOE Joint Genome Institute GCA_000009145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1/ na na na haploid bacteria 2812094 2812094 50.500000 1 1 1 NCBI RefSeq GCF_000009145.1-RS_2025_04_26 2025-04-26 2683 2573 48 12700255 GCF_000009165.1 PRJNA224116 SAMEA3138194 na na 316273 456327 Xanthomonas euvesicatoria pv. vesicatoria str. 85-10 strain=85-10 na latest Complete Genome Major Full 2005-10-21 ASM916v1 Bielefeld University GCA_000009165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/165/GCF_000009165.1_ASM916v1/ na na na haploid bacteria 5420152 5420152 64.500000 5 5 5 NCBI RefSeq GCF_000009165.1-RS_2025_05_05 2025-05-05 4717 4448 100 16237009 GCF_000009185.1 PRJNA224116 SAMEA3138195 na reference genome 362976 293091 Haloquadratum walsbyi DSM 16790 strain=DSM 16790 = HBSQ001 na latest Complete Genome Major Full 2006-06-22 ASM918v1 Max Planck Institute GCA_000009185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1/ na na na haploid archaea 3179361 3179361 48.000000 2 2 2 NCBI RefSeq GCF_000009185.1-RS_2024_10_21 2024-10-21 2936 2705 53 16820047 GCF_000009205.2 PRJNA224116 SAMEA1705932 na na 272563 1496 Clostridioides difficile 630 strain=630 na latest Complete Genome Major Full 2017-09-29 ASM920v2 Sanger Institute GCA_000009205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.2_ASM920v2/ na na na haploid bacteria 4298133 4298133 29.000000 2 2 2 NCBI RefSeq GCF_000009205.2-RS_2026_02_28 2026-02-28 3978 3804 124 16804543;21349987;24568651 GCF_000009245.1 PRJNA224116 SAMEA3138197 na na 376619 263 Francisella tularensis subsp. holarctica LVS strain=LVS na latest Complete Genome Major Full 2006-03-02 ASM924v1 LLNL GCA_000009245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1/ na na na haploid bacteria 1895994 1895994 32.000000 1 1 1 NCBI RefSeq GCF_000009245.1-RS_2025_02_10 2025-02-10 1974 1632 52 na GCF_000009265.1 PRJNA224116 SAMEA1705944 na reference genome 216596 3019933 Rhizobium johnstonii 3841 strain=3841 na latest Complete Genome Major Full 2006-09-20 ASM926v1 Sanger Institute GCA_000009265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/265/GCF_000009265.1_ASM926v1/ na assembly from type material na haploid bacteria 7751309 7751309 61.000000 7 7 7 NCBI RefSeq GCF_000009265.1-RS_2024_07_29 2024-07-29 7503 7201 65 16640791 GCF_000009285.1 PRJNA224116 SAMEA3283071 na na 381666 106590 Cupriavidus necator H16 strain=H16 na latest Complete Genome Major Full 2006-08-30 ASM928v2 Gottingen Genomics Laboratory GCA_000009285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/285/GCF_000009285.1_ASM928v2/ na na na haploid bacteria 7416678 7416678 66.500000 3 3 3 NCBI RefSeq GCF_000009285.1-RS_2025_02_11 2025-02-11 6894 6630 80 12948488;16964242 GCF_000009305.1 PRJNA224116 SAMEA3138199 na reference genome 382638 212 Helicobacter acinonychis str. Sheeba strain=Sheeba na latest Complete Genome Major Full 2006-06-28 ASM930v1 Penn State Univ. GCA_000009305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1/ na na na haploid bacteria 1557588 1557588 38.000000 2 2 2 NCBI RefSeq GCF_000009305.1-RS_2025_03_29 2025-03-29 1539 1367 45 16789826 GCF_000009325.1 PRJNA224116 SAMEA3138200 na na 393115 263 Francisella tularensis subsp. tularensis FSC198 strain=FSC 198 na latest Complete Genome Major Full 2006-07-12 ASM932v1 University of Birmingham GCA_000009325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/325/GCF_000009325.1_ASM932v1/ na na na haploid bacteria 1892616 1892616 32.500000 1 1 1 NCBI RefSeq GCF_000009325.1-RS_2025_02_10 2025-02-10 1941 1723 52 na GCF_000009345.1 PRJNA224116 SAMEA1705958 na na 393305 630 Yersinia enterocolitica subsp. enterocolitica 8081 strain=8081 na latest Complete Genome Major Full 2007-01-12 ASM934v1 Sanger Institute GCA_000009345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1/ na na na haploid bacteria 4683620 4683620 47.000000 2 2 2 NCBI RefSeq GCF_000009345.1-RS_2025_04_02 2025-04-02 4334 4079 118 12834539;17173484 GCF_000009365.1 PRJNA224116 SAMEA3138202 na reference genome 393595 59754 Alcanivorax borkumensis SK2 strain=SK2 na latest Complete Genome Major Full 2006-07-24 ASM936v1 German Research Centre for Biotechnology GCA_000009365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1/ na assembly from type material na haploid bacteria 3120143 3120143 54.500000 1 1 1 NCBI RefSeq GCF_000009365.1-RS_2024_12_13 2024-12-13 2833 2761 55 16878126 GCF_000009385.1 PRJNA224116 SAMEA1705956 na na 160491 1314 Streptococcus pyogenes str. Manfredo strain=Manfredo na latest Complete Genome Major Full 2007-03-29 ASM938v1 Sanger Institute GCA_000009385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/385/GCF_000009385.1_ASM938v1/ na na na haploid bacteria 1841271 1841271 38.500000 1 1 1 NCBI RefSeq GCF_000009385.1-RS_2025_02_10 2025-02-10 1884 1736 88 17012393 GCF_000009405.1 PRJNA224116 SAMEA2272563 na na 396513 1281 Staphylococcus carnosus subsp. carnosus TM300 strain=TM300 na latest Complete Genome Major Full 2009-02-03 ASM940v1 Competence Network PathoGenoMik GCA_000009405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/405/GCF_000009405.1_ASM940v1/ na na na haploid bacteria 2566424 2566424 34.500000 1 1 1 NCBI RefSeq GCF_000009405.1-RS_2025_02_10 2025-02-10 2535 2397 80 19060169 GCF_000009425.1 PRJNA224116 SAMEA3138204 na na 416870 1359 Lactococcus cremoris subsp. cremoris MG1363 strain=MG1363 na latest Complete Genome Major Full 2007-02-06 ASM942v1 MG1363 Sequencing Consortium GCA_000009425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/425/GCF_000009425.1_ASM942v1/ na na na haploid bacteria 2529478 2529478 35.500000 1 1 1 NCBI RefSeq GCF_000009425.1-RS_2024_09_17 2024-09-17 2590 2386 86 17307855 GCF_000009445.1 PRJNA224116 SAMEA2272684 na na 410289 1773 Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2 strain=BCG Pasteur 1173P2 na latest Complete Genome Major Full 2007-01-08 ASM944v1 Mycobacterium bovis sequencing teams GCA_000009445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/445/GCF_000009445.1_ASM944v1/ na na na haploid bacteria 4374522 4374522 65.500000 1 1 1 NCBI RefSeq GCF_000009445.1-RS_2025_06_29 2025-06-29 4116 3818 53 17372194 GCF_000009465.1 PRJNA224116 SAMEA1705939 na na 272831 487 Neisseria meningitidis FAM18 strain=FAM18 na latest Complete Genome Major Full 2007-01-04 ASM946v1 Sanger Institute GCA_000009465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/465/GCF_000009465.1_ASM946v1/ na na na haploid bacteria 2194961 2194961 51.500000 1 1 1 NCBI RefSeq GCF_000009465.1-RS_2025_04_20 2025-04-20 2204 1971 75 17305430 GCF_000009485.1 PRJNA224116 SAMEA1705928 na na 216591 95486 Burkholderia cenocepacia J2315 strain=J2315 na latest Complete Genome Major Full 2008-06-19 ASM948v1 Sanger Institute GCA_000009485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/485/GCF_000009485.1_ASM948v1/ na na na haploid bacteria 8055782 8055782 67.000000 4 4 4 NCBI RefSeq GCF_000009485.1-RS_2025_02_10 2025-02-10 7448 7249 97 18931103 GCF_000009505.1 PRJNA224116 SAMEA1705941 na na 550537 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 strain=P125109 na latest Complete Genome Major Full 2008-09-25 ASM950v1 Wellcome Trust Sanger Institute GCA_000009505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/505/GCF_000009505.1_ASM950v1/ na na na haploid bacteria 4685848 4685848 52.000000 1 1 1 NCBI RefSeq GCF_000009505.1-RS_2025_03_15 2025-03-15 4569 4285 120 18583645 GCF_000009525.1 PRJNA224116 SAMEA1705927 na na 550538 28901 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 strain=287/91 na latest Complete Genome Major Full 2008-09-18 ASM952v1 Wellcome Trust Sanger Institute GCA_000009525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/525/GCF_000009525.1_ASM952v1/ na na na haploid bacteria 4658697 4658697 52.000000 1 1 1 NCBI RefSeq GCF_000009525.1-RS_2025_03_15 2025-03-15 4523 4060 109 18583645 GCF_000009545.1 PRJNA224116 SAMEA3138207 na na 218495 1349 Streptococcus uberis 0140J strain=0140J na latest Complete Genome Major Full 2009-01-28 ASM954v1 Sanger Institute GCA_000009545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1/ na na na haploid bacteria 1852352 1852352 36.500000 1 1 1 NCBI RefSeq GCF_000009545.1-RS_2025_02_10 2025-02-10 1883 1776 78 na GCF_000009565.1 PRJNA224116 SAMEA2272558 na na 469008 562 Escherichia coli BL21(DE3) strain=BL21(DE3) na latest Complete Genome Major Full 2010-12-09 ASM956v1 Austrian Center for Biopharmaceutical Technology GCA_000009565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/565/GCF_000009565.1_ASM956v1/ na na na haploid bacteria 4558947 4558947 51.000000 1 1 1 NCBI RefSeq GCF_000009565.1-RS_2025_06_09 2025-06-09 4449 4141 116 na GCF_000009585.1 PRJNA224116 SAMEA2272644 na na 523796 1280 Staphylococcus aureus subsp. aureus ST398 strain=type strain:ST398 S0385 latest Complete Genome Major Full 2010-01-07 ASM958v1 University Medical Centre Utrecht GCA_000009585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/585/GCF_000009585.1_ASM958v1/ na na na haploid bacteria 2885367 2885367 33.000000 4 4 4 NCBI RefSeq GCF_000009585.1-RS_2025_03_16 2025-03-16 2879 2687 80 20546576 GCF_000009605.1 PRJNA224116 SAMD00061095 na na 107806 9 Buchnera aphidicola str. APS (Acyrthosiphon pisum) strain=APS Tokyo1998 latest Complete Genome Major Full 2004-05-11 ASM960v1 Rikken GSC GCA_000009605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/605/GCF_000009605.1_ASM960v1/ na na na haploid bacteria 655725 655725 26.500000 3 3 3 NCBI RefSeq GCF_000009605.1-RS_2025_03_15 2025-03-15 627 578 37 10993077 GCF_000009625.1 PRJNA224116 SAMD00061086 na na 266835 2066070 Mesorhizobium japonicum MAFF 303099 strain=MAFF 303099 na latest Complete Genome Major Full 2004-05-11 ASM962v1 Kazusa GCA_000009625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/625/GCF_000009625.1_ASM962v1/ na assembly from type material na haploid bacteria 7596297 7596297 62.500000 3 3 3 NCBI RefSeq GCF_000009625.1-RS_2025_04_23 2025-04-23 7449 7162 62 11214968 GCF_000009645.1 PRJNA224116 SAMD00061099 na na 158879 1280 Staphylococcus aureus subsp. aureus N315 strain=N315 na latest Complete Genome Major Full 2004-05-11 ASM964v1 Juntendo Univ. GCA_000009645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/645/GCF_000009645.1_ASM964v1/ na na na haploid bacteria 2839469 2839469 33.000000 2 2 2 NCBI RefSeq GCF_000009645.1-RS_2025_03_15 2025-03-15 2816 2657 81 11418146 GCF_000009665.1 PRJNA224116 SAMD00061098 na na 158878 1280 Staphylococcus aureus subsp. aureus Mu50 strain=Mu50 na latest Complete Genome Major Full 2004-05-14 ASM966v1 Juntendo Univ. GCA_000009665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/665/GCF_000009665.1_ASM966v1/ na na na haploid bacteria 2903636 2903636 33.000000 2 2 2 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2024-02-17 2911 2748 79 11418146;15141945 GCF_000009685.1 PRJNA224116 SAMD00061119 na na 195102 1502 Clostridium perfringens str. 13 strain=13 na latest Complete Genome Major Full 2004-05-11 ASM968v1 Univ. Kyushu GCA_000009685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/685/GCF_000009685.1_ASM968v1/ na na na haploid bacteria 3085740 3085740 28.500000 2 2 2 NCBI RefSeq GCF_000009685.1-RS_2025_04_15 2025-04-15 2833 2657 130 11792842 GCF_000009705.1 PRJNA224116 SAMD00061094 na na 103690 103690 Nostoc sp. PCC 7120 = FACHB-418 strain=PCC 7120 na latest Complete Genome Major Full 2004-05-11 ASM970v1 Kazusa GCA_000009705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1/ na na na haploid bacteria 7211789 7211789 41.500000 7 7 7 NCBI RefSeq GCF_000009705.1-RS_2025_02_24 2025-02-24 6169 5964 86 11759840 GCF_000009745.1 PRJNA224116 SAMD00061075 na na 196600 672 Vibrio vulnificus YJ016 strain=YJ016 na latest Complete Genome Major Full 2003-10-03 ASM974v1 NHRI, Taiwan GCA_000009745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1/ na na na haploid bacteria 5260086 5260086 46.500000 3 3 3 NCBI RefSeq GCF_000009745.1-RS_2025_02_10 2025-02-10 4737 4552 144 14656965 GCF_000009765.2 PRJNA224116 SAMD00061088 na reference genome 227882 33903 Streptomyces avermitilis MA-4680 = NBRC 14893 strain=MA-4680 na latest Complete Genome Minor Full 2016-03-24 ASM976v2 NITE GCA_000009765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2/ na assembly from type material na haploid bacteria 9119895 9119895 70.500000 2 2 2 NCBI RefSeq GCF_000009765.2-RS_2026_03_30 2026-03-30 8043 7673 96 11572948;12692562;23990133 GCF_000009785.1 PRJNA224116 SAMD00061072 na reference genome 235909 1462 Geobacillus kaustophilus HTA426 strain=HTA426 na latest Complete Genome Major Full 2004-12-04 ASM978v1 JAMSTEC GCA_000009785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/785/GCF_000009785.1_ASM978v1/ na na na haploid bacteria 3592666 3592666 52.000000 2 2 2 NCBI RefSeq GCF_000009785.1-RS_2024_12_11 2024-12-11 3657 3391 119 15576355 GCF_000009805.1 PRJNA224116 SAMD00061069 na reference genome 247156 37329 Nocardia farcinica IFM 10152 strain=IFM 10152 na latest Complete Genome Major Full 2004-10-08 ASM980v1 Department of Bioactive Molecules, National Institute of Infectious Diseases GCA_000009805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/805/GCF_000009805.1_ASM980v1/ na na na haploid bacteria 6292344 6292344 70.500000 3 3 3 NCBI RefSeq GCF_000009805.1-RS_2024_12_11 2024-12-11 6059 5946 66 15466710 GCF_000009825.1 PRJNA224116 SAMD00061074 na na 66692 79880 Shouchella clausii KSM-K16 strain=KSM-K16 na latest Complete Genome Major Full 2004-12-30 ASM982v1 Kao Corporation, Biological Science Laboratories, Japan GCA_000009825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1/ na na na haploid bacteria 4303871 4303871 45.000000 1 1 1 NCBI RefSeq GCF_000009825.1-RS_2025_06_24 2025-06-24 4372 4223 102 7632397;9278275;17429572 GCF_000009865.1 PRJNA224116 SAMD00061066 na na 279808 1283 Staphylococcus haemolyticus JCSC1435 strain=JCSC1435 na latest Complete Genome Major Full 2005-06-30 ASM986v1 NITE GCA_000009865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1/ na na na haploid bacteria 2697861 2697861 33.000000 4 4 4 NCBI RefSeq GCF_000009865.1-RS_2025_02_16 2025-02-16 2672 2504 82 16237012 GCF_000009885.1 PRJNA224116 SAMD00060934 na na 484021 573 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 strain=NTUH-K2044 na latest Complete Genome Major Full 2005-01-05 ASM988v1 National Health Research Institutes GCA_000009885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/885/GCF_000009885.1_ASM988v1/ na na na haploid bacteria 5472672 5472672 57.500000 2 2 2 NCBI RefSeq GCF_000009885.1-RS_2025_06_23 2025-06-23 5311 5045 123 19447910 GCF_000009905.1 PRJNA224116 SAMD00061067 na reference genome 292459 2734 Symbiobacterium thermophilum IAM 14863 strain=IAM14863 na latest Complete Genome Major Full 2004-09-02 ASM990v1 Kitasato Institute for Life Sciences, Japan GCA_000009905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1/ na assembly from type material na haploid bacteria 3566135 3566135 68.500000 1 1 1 NCBI RefSeq GCF_000009905.1-RS_2025_03_29 2025-03-29 3403 3240 119 15383646 GCF_000009925.1 PRJNA224116 SAMD00061068 na na 295405 817 Bacteroides fragilis YCH46 strain=YCH46 na latest Complete Genome Major Full 2004-09-16 ASM992v1 Kitasato Univ. GCA_000009925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1/ na na na haploid bacteria 5310990 5310990 43.000000 2 2 2 NCBI RefSeq GCF_000009925.1-RS_2024_10_23 2024-10-23 4400 4229 94 15466707 GCF_000009945.1 PRJNA224116 SAMD00061108 na reference genome 264202 83556 Chlamydia felis Fe/C-56 strain=Fe/C-56 na latest Complete Genome Major Full 2006-03-09 ASM994v1 Japanese Consortium/Yamaguchi Univ. GCA_000009945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/945/GCF_000009945.1_ASM994v1/ na na na haploid bacteria 1173791 1173791 39.500000 2 2 2 NCBI RefSeq GCF_000009945.1-RS_2024_12_13 2024-12-13 1030 976 44 16766509 GCF_000009965.1 PRJNA224116 SAMD00061071 na reference genome 69014 311400 Thermococcus kodakarensis KOD1 strain=KOD1 na latest Complete Genome Major Full 2005-01-05 ASM996v1 Kyoto University, Japan GCA_000009965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1/ na assembly from type material na haploid archaea 2088737 2088737 52.000000 1 1 1 NCBI RefSeq GCF_000009965.1-RS_2024_10_21 2024-10-21 2359 2290 53 15710748 GCF_000009985.1 PRJNA224116 SAMD00061077 na reference genome 342108 84159 Paramagnetospirillum magneticum AMB-1 strain=AMB-1 na latest Complete Genome Major Full 2005-12-01 ASM998v1 Tokyo University of Agriculture and Technology, Japan GCA_000009985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1/ na assembly from type material na haploid bacteria 4967148 4967148 65.000000 1 1 1 NCBI RefSeq GCF_000009985.1-RS_2024_12_09 2024-12-09 4763 4636 60 16303747 GCF_000010005.1 PRJNA224116 SAMD00060920 na na 557433 1598 Limosilactobacillus reuteri subsp. reuteri JCM 1112 strain=JCM 1112 na latest Complete Genome Major Full 2008-04-15 ASM1000v1 Kitasato Institute for Life Sciences GCA_000010005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/005/GCF_000010005.1_ASM1000v1/ na assembly from type material na haploid bacteria 2039414 2039414 39.000000 1 1 1 NCBI RefSeq GCF_000010005.1-RS_2025_01_20 2025-01-20 2092 1939 86 18487258 GCF_000010025.1 PRJNA224116 SAMD00061078 na na 342109 347 Xanthomonas oryzae pv. oryzae MAFF 311018 strain=MAFF 311018 na latest Complete Genome Major Full 2006-01-04 ASM1002v1 National Institute of Agrobiological Sciences GCA_000010025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/025/GCF_000010025.1_ASM1002v1/ na na na haploid bacteria 4940217 4940217 63.500000 1 1 1 NCBI RefSeq GCF_000010025.1-RS_2025_05_07 2025-05-07 4672 3695 206 na GCF_000010045.1 PRJNA224116 SAMD00061082 na na 138119 49338 Desulfitobacterium hafniense Y51 strain=Y51 na latest Complete Genome Major Full 2006-03-09 ASM1004v1 Research Institute of Innovative Technology for the Earth (RITE) GCA_000010045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/045/GCF_000010045.1_ASM1004v1/ na na na haploid bacteria 5727534 5727534 47.500000 1 1 1 NCBI RefSeq GCF_000010045.1-RS_2025_05_13 2025-05-13 5507 5335 81 16513756 GCF_000010065.1 PRJNA224116 SAMD00061073 na na 269084 32046 Synechococcus elongatus PCC 6301 strain=PCC 6301 na latest Complete Genome Major Full 2004-12-16 ASM1006v1 Nagoya University, Japan GCA_000010065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1/ na assembly from type material na haploid bacteria 2696255 2696255 55.500000 1 1 1 NCBI RefSeq GCF_000010065.1-RS_2025_03_15 2025-03-15 2737 2657 55 16407232;16882723;17040912;17211581 GCF_000010085.1 PRJNA224116 SAMD00061079 na reference genome 343509 63612 Sodalis glossinidius str. 'morsitans' strain=morsitans na latest Complete Genome Major Full 2006-01-10 ASM1008v1 Kitasato Institute for Life Sciences, Japan GCA_000010085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1/ na na na haploid bacteria 4292502 4292502 54.500000 4 4 4 NCBI RefSeq GCF_000010085.1-RS_2025_04_16 2025-04-16 5077 3795 99 16365377 GCF_000010105.1 PRJNA224116 SAMD00060932 na na 234621 1833 Rhodococcus erythropolis PR4 strain=PR4 na latest Complete Genome Major Full 2009-04-01 ASM1010v1 NITE GCA_000010105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/105/GCF_000010105.1_ASM1010v1/ na na na haploid bacteria 6895538 6895538 62.500000 4 4 4 NCBI RefSeq GCF_000010105.1-RS_2025_03_28 2025-03-28 6539 6402 72 16423019 GCF_000010125.1 PRJNA224116 SAMD00061076 na reference genome 342451 29385 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 strain=ATCC 15305 na latest Complete Genome Major Full 2005-08-12 ASM1012v1 Kitasato Institute for Life Sciences, Japan GCA_000010125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1/ na assembly from type material na haploid bacteria 2577899 2577899 33.000000 3 3 3 NCBI RefSeq GCF_000010125.1-RS_2024_12_11 2024-12-11 2545 2390 83 16135568 GCF_000010145.1 PRJNA224116 SAMD00060917 na na 334390 1613 Limosilactobacillus fermentum IFO 3956 strain=IFO 3956 na latest Complete Genome Major Full 2008-04-15 ASM1014v1 Kitasato Institute for Life Sciences GCA_000010145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/145/GCF_000010145.1_ASM1014v1/ na na na haploid bacteria 2098685 2098685 51.500000 1 1 1 NCBI RefSeq GCF_000010145.1-RS_2025_04_02 2025-04-02 2176 1963 77 18487258 GCF_000010165.1 PRJNA224116 SAMD00060942 na na 358681 1393 Brevibacillus brevis NBRC 100599 strain=NBRC 100599 na latest Complete Genome Major Full 2009-04-01 ASM1016v1 National Institute of Technology and Evaluation GCA_000010165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1/ na na na haploid bacteria 6296436 6296436 47.500000 1 1 1 NCBI RefSeq GCF_000010165.1-RS_2025_03_15 2025-03-15 6033 5807 176 na GCF_000010185.1 PRJNA224116 SAMD00060918 na na 334413 1260 Finegoldia magna ATCC 29328 strain=ATCC 29328 na latest Complete Genome Major Full 2008-02-14 ASM1018v1 Kitasato Institute for Life Sciences GCA_000010185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1/ na na na haploid bacteria 1986740 1986740 32.000000 2 2 2 NCBI RefSeq GCF_000010185.1-RS_2025_02_21 2025-02-21 1907 1826 63 18263572 GCF_000010205.1 PRJNA224116 SAMD00060919 na na 334380 784 Orientia tsutsugamushi str. Ikeda strain=Ikeda na latest Complete Genome Major Full 2008-05-29 ASM1020v1 Kitasato Institute for Life Sciences GCA_000010205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1/ na na na haploid bacteria 2008987 2008987 30.500000 1 1 1 NCBI RefSeq GCF_000010205.1-RS_2025_01_08 2025-01-08 2174 1650 40 18508905 GCF_000010225.1 PRJNA224116 SAMD00060924 na na 340322 1718 Corynebacterium glutamicum R strain=R na latest Complete Genome Major Full 2007-04-04 ASM1022v1 Research Institute of Innovative Technology for the Earth (RITE), Microbiology research group GCA_000010225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/225/GCF_000010225.1_ASM1022v1/ na na na haploid bacteria 3363299 3363299 54.000000 2 2 2 NCBI RefSeq GCF_000010225.1-RS_2025_02_10 2025-02-10 3162 3037 78 17379713 GCF_000010245.2 PRJNA224116 SAMD00061081 na na 316407 562 Escherichia coli str. K-12 substr. W3110 strain=K-12 substr. W3110 na latest Complete Genome Major Full 2006-01-23 ASM1024v1 Nara Institute of Science and Technology GCA_000010245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/245/GCF_000010245.2_ASM1024v1/ na na na haploid bacteria 4646332 4646332 51.000000 1 1 1 NCBI RefSeq GCF_000010245.2-RS_2025_04_07 2025-04-07 4531 4225 121 273224;319453;357433;358189;368797;375010;1325970;1355089;1357528;1396599;1447125;1459951;1474579;1630901;1663890;1670938;1675419;1688424;1695895;1713281;1714590;1721838;1741267;1849492;1850088;1860827;1900346;1943700;1943701;1971619;1987124;1991717;1992352;2011499;2013578;2046548;2117666;2124684;2157212;2180916;2181403;2185015;2190189;2203971;2251131;2254270;2261080;2338917;2388850;2404942;2408019;2429258;2450046;2537812;2542093;2651887;2666401;2670894;2684966;2691840;2693214;2777793;2806264;2824445;2839489;2843525;2904262;2985604;2987244;2993799;2995358;2996940;3003084;3015933;3016720;3020380;3023634;3025182;3027045;3029674;3031429;3040734;3049588;3057437;3079747;3169018;3277952;3295485;3301821;3316192;3316212;3372485;3540531;3540961;3549454;3882429;3887408;3902576;6089111;6094577;6094578;6100966;6159575;6251457;6259626;6262769;6267039;6272196;6283093;6296778;6302075;6316258;6322174;6324102;6324103;6341601;6343085;6345153;6352260;6374664;6377309;6396164;6397401;7003595;7008027;7027255;7904973;8183897;8202364;8387990;8412694;8419307;8905232;8940112;9097039;9097040;9205837;16397293;16738553 GCF_000010265.1 PRJNA224116 SAMD00060959 na reference genome 583346 1534 Clostridium kluyveri NBRC 12016 strain=NBRC 12016 na latest Complete Genome Major Full 2009-01-06 ASM1026v1 Research Institute of Innovative Technology for the Earth (RITE), Microbiology research group GCA_000010265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/265/GCF_000010265.1_ASM1026v1/ na assembly from type material na haploid bacteria 3955303 3955303 32.000000 2 2 2 NCBI RefSeq GCF_000010265.1-RS_2025_04_10 2025-04-10 3931 3758 85 na GCF_000010285.1 PRJNA224116 SAMD00060935 na na 378753 72000 Kocuria rhizophila DC2201 strain=DC2201 na latest Complete Genome Major Full 2008-04-17 ASM1028v1 National Institute of Technology and Evaluation GCA_000010285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/285/GCF_000010285.1_ASM1028v1/ na na na haploid bacteria 2697540 2697540 71.000000 1 1 1 NCBI RefSeq GCF_000010285.1-RS_2025_03_15 2025-03-15 2379 2298 59 18408034 GCF_000010305.1 PRJNA224116 SAMD00060909 na reference genome 379066 173480 Gemmatimonas aurantiaca T-27 strain=T-27 na latest Complete Genome Major Full 2009-04-01 ASM1030v1 National Institute of Technology and Evaluation GCA_000010305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1/ na assembly from type material na haploid bacteria 4636964 4636964 64.500000 1 1 1 NCBI RefSeq GCF_000010305.1-RS_2025_05_05 2025-05-05 4012 3943 55 na GCF_000010325.1 PRJNA224116 SAMD00060914 na na 387092 387092 Nitratiruptor sp. SB155-2 strain=SB155-2 na latest Complete Genome Major Full 2007-07-11 ASM1032v1 Japan Agency for Marine-Earth Science and Technology GCA_000010325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1/ na na na haploid bacteria 1877931 1877931 39.500000 1 1 1 NCBI RefSeq GCF_000010325.1-RS_2024_06_16 2024-06-16 1993 1924 57 16156735;17615243 GCF_000010345.1 PRJNA224116 SAMD00060915 na na 387093 387093 Sulfurovum sp. NBC37-1 strain=NBC37-1 na latest Complete Genome Major Full 2007-07-11 ASM1034v1 Japan Agency for Marine-Earth Science and Technology GCA_000010345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1/ na na na haploid bacteria 2562277 2562277 44.000000 1 1 1 NCBI RefSeq GCF_000010345.1-RS_2024_06_16 2024-06-16 2605 2523 56 16156735;17615243 GCF_000010365.1 PRJNA224116 SAMD00061085 na na 387662 114186 Candidatus Carsonella ruddii PV strain=PV na latest Complete Genome Major Full 2006-10-16 ASM1036v1 Kitasato Institute for Life Sciences GCA_000010365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/365/GCF_000010365.1_ASM1036v1/ na na na haploid bacteria 159662 159662 16.500000 1 1 1 NCBI RefSeq GCF_000010365.1-RS_2025_03_27 2025-03-27 210 181 28 17038615 GCF_000010385.1 PRJNA224116 SAMD00061087 na na 409438 562 Escherichia coli SE11 strain=SE11 na latest Complete Genome Major Full 2008-10-22 ASM1038v1 Kitasato Institute for Life Sciences GCA_000010385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/385/GCF_000010385.1_ASM1038v1/ na assembly designated as clade exemplar na haploid bacteria 5155626 5155626 50.500000 7 7 7 NCBI RefSeq GCF_000010385.1-RS_2025_06_09 2025-06-09 5106 4822 118 18931093 GCF_000010405.1 PRJNA224116 SAMD00060908 na reference genome 412965 412965 Candidatus Vesicomyidisocius calyptogenae strain=HA na latest Complete Genome Major Full 2007-05-08 ASM1040v1 Japan Agency for Maine-Earth Science and Technology GCA_000010405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/405/GCF_000010405.1_ASM1040v1/ na na na haploid bacteria 1022154 1022154 31.500000 1 1 1 NCBI RefSeq GCF_000010405.1-RS_2025_06_16 2025-06-16 996 952 42 17493812;21966992 GCF_000010425.1 PRJNA224116 SAMD00061080 na reference genome 367928 1680 Bifidobacterium adolescentis ATCC 15703 strain=ATCC 15703 na latest Complete Genome Major Full 2006-12-05 ASM1042v1 Gifu University, Life Science Research Center, Japan GCA_000010425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1/ na assembly from type material na haploid bacteria 2089645 2089645 59.000000 1 1 1 NCBI RefSeq GCF_000010425.1-RS_2024_12_11 2024-12-11 1753 1656 73 na GCF_000010445.1 PRJNA224116 SAMD00060910 na na 418127 1280 Staphylococcus aureus subsp. aureus Mu3 strain=Mu3 na latest Complete Genome Major Full 2007-09-03 ASM1044v1 Juntendo Universit GCA_000010445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/445/GCF_000010445.1_ASM1044v1/ na na na haploid bacteria 2880168 2880168 33.000000 1 1 1 NCBI RefSeq GCF_000010445.1-RS_2025_03_18 2025-03-18 2887 2730 79 9400512;17954695 GCF_000010465.1 PRJNA224116 SAMD00060913 na na 426430 1280 Staphylococcus aureus subsp. aureus str. Newman strain=Newman na latest Complete Genome Major Full 2007-07-02 ASM1046v1 Juntendo University School of Medicine, Department of Bacteriology GCA_000010465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/465/GCF_000010465.1_ASM1046v1/ na na na haploid bacteria 2878897 2878897 33.000000 1 1 1 NCBI RefSeq GCF_000010465.1-RS_2025_03_18 2025-03-18 2935 2784 79 17951380 GCF_000010485.1 PRJNA224116 SAMD00060923 na na 431946 562 Escherichia coli SE15 strain=SE15 na latest Complete Genome Major Full 2009-12-14 ASM1048v1 Kitasato University GCA_000010485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/485/GCF_000010485.1_ASM1048v1/ na na na haploid bacteria 4839683 4839683 50.500000 2 2 2 NCBI RefSeq GCF_000010485.1-RS_2025_06_09 2025-06-09 4691 4417 112 20008064 GCF_000010505.1 PRJNA224116 SAMD00060922 na reference genome 431947 837 Porphyromonas gingivalis ATCC 33277 strain=ATCC 33277 na latest Complete Genome Major Full 2008-05-20 ASM1050v1 Kitasato University GCA_000010505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1/ na assembly from type material na haploid bacteria 2354886 2354886 48.500000 1 1 1 NCBI RefSeq GCF_000010505.1-RS_2024_12_09 2024-12-09 2097 1943 67 18524787 GCF_000010525.1 PRJNA224116 SAMD00060925 na reference genome 438753 7 Azorhizobium caulinodans ORS 571 strain=ORS 571 na latest Complete Genome Major Full 2007-10-16 ASM1052v1 University of Tokyo GCA_000010525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1/ na assembly from type material na haploid bacteria 5369772 5369772 67.500000 1 1 1 NCBI RefSeq GCF_000010525.1-RS_2025_03_27 2025-03-27 4896 4780 66 17720818;18522759;19542345;20382809;21571889 GCF_000010545.1 PRJNA224116 SAMD00060926 na na 395019 87883 Burkholderia multivorans ATCC 17616 strain=ATCC 17616 na latest Complete Genome Major Full 2008-06-03 ASM1054v1 Tohoku University GCA_000010545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/545/GCF_000010545.1_ASM1054v1/ na na na haploid bacteria 7008810 7008810 66.500000 4 4 4 NCBI RefSeq GCF_000010545.1-RS_2025_06_16 2025-06-16 6508 6298 85 na GCF_000010585.1 PRJNA224116 SAMD00060930 na na 458233 69966 Macrococcoides caseolyticum JCSC5402 strain=JCSC5402 na latest Complete Genome Major Full 2009-01-28 ASM1058v1 Juntendo University School of Medicine GCA_000010585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1/ na na na haploid bacteria 2219737 2219737 36.500000 9 9 9 NCBI RefSeq GCF_000010585.1-RS_2025_02_10 2025-02-10 2393 2281 67 19074389 GCF_000010605.1 PRJNA224116 SAMD00060929 na na 455632 1911 Streptomyces griseus subsp. griseus NBRC 13350 strain=NBRC 13350 na latest Complete Genome Major Full 2008-04-08 ASM1060v1 The University of Tokyo GCA_000010605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1/ na na na haploid bacteria 8545929 8545929 72.000000 1 1 1 NCBI RefSeq GCF_000010605.1-RS_2024_12_22 2024-12-22 7232 7031 88 18310036;18364359;18375553 GCF_000010625.1 PRJNA224116 SAMD00060936 na na 449447 1126 Microcystis aeruginosa NIES-843 strain=NIES-843 na latest Complete Genome Major Full 2008-01-24 ASM1062v1 Kazusa DNA Research Institute GCA_000010625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1/ na assembly from type material na haploid bacteria 5842795 5842795 42.500000 1 1 1 NCBI RefSeq GCF_000010625.1-RS_2025_04_07 2025-04-07 5808 5230 52 18192279 GCF_000010645.1 PRJNA224116 SAMD00060940 na reference genome 511995 511435 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 strain=CfPt1-2 na latest Complete Genome Major Full 2008-11-12 ASM1064v1 RIKEN Genomic Sciences Center (GSC) GCA_000010645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/645/GCF_000010645.1_ASM1064v1/ na na na haploid bacteria 1224919 1224919 33.000000 5 5 5 NCBI RefSeq GCF_000010645.1-RS_2024_12_09 2024-12-09 1054 999 44 19008447 GCF_000010665.1 PRJNA224116 SAMD00060954 na reference genome 573370 184917 Solidesulfovibrio magneticus RS-1 strain=RS-1 na latest Complete Genome Major Full 2009-06-11 ASM1066v1 National Institute of Technology and Evaluation GCA_000010665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1/ na assembly from type material na haploid bacteria 5315620 5315620 62.500000 3 3 3 NCBI RefSeq GCF_000010665.1-RS_2024_12_09 2024-12-09 4716 4611 68 19675025 GCF_000010685.1 PRJNA224116 SAMD00060950 na na 561275 1773 Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172 strain=Tokyo 172 na latest Complete Genome Major Full 2009-03-09 ASM1068v1 Japan BCG Laboratory GCA_000010685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/685/GCF_000010685.1_ASM1068v1/ na na na haploid bacteria 4371711 4371711 65.500000 1 1 1 NCBI RefSeq GCF_000010685.1-RS_2025_06_28 2025-06-28 4110 3815 51 19200449 GCF_000010705.1 PRJNA224116 SAMD00060937 na na 486410 1334 Streptococcus dysgalactiae subsp. equisimilis GGS_124 strain=GGS_124 na latest Complete Genome Major Full 2009-06-30 ASM1070v1 Research Institute, International Medical Center of Japan GCA_000010705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/705/GCF_000010705.1_ASM1070v1/ na na na haploid bacteria 2106340 2106340 39.500000 1 1 1 NCBI RefSeq GCF_000010705.1-RS_2025_06_16 2025-06-16 2134 1945 76 21223537 GCF_000010725.1 PRJNA224116 SAMD00060958 na na 137722 137722 Azospirillum sp. B510 strain=B510 na latest Complete Genome Major Full 2010-02-16 ASM1072v1 Kazusa DNA Research Institute GCA_000010725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/725/GCF_000010725.1_ASM1072v1/ na na na haploid bacteria 7599738 7599738 67.500000 7 7 7 NCBI RefSeq GCF_000010725.1-RS_2024_08_22 2024-08-22 6777 6484 110 20047946 GCF_000010745.1 PRJNA224116 SAMD00060956 na na 585395 562 Escherichia coli O103:H2 str. 12009 strain=12009 na latest Complete Genome Major Full 2009-09-10 ASM1074v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000010745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/745/GCF_000010745.1_ASM1074v1/ na na na haploid bacteria 5524860 5524860 50.500000 2 2 2 NCBI RefSeq GCF_000010745.1-RS_2025_04_29 2025-04-29 5578 5149 128 19815525 GCF_000010765.1 PRJNA224116 SAMD00060957 na na 585396 562 Escherichia coli O111:H- str. 11128 strain=11128 na latest Complete Genome Major Full 2009-09-10 ASM1076v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000010765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/765/GCF_000010765.1_ASM1076v1/ na na na haploid bacteria 5766081 5766081 50.500000 6 6 6 NCBI RefSeq GCF_000010765.1-RS_2025_04_29 2025-04-29 5910 5393 146 19815525 GCF_000010785.1 PRJNA224116 SAMD00060961 na na 608538 940 Hydrogenobacter thermophilus TK-6 strain=TK-6 na latest Complete Genome Major Full 2010-02-11 ASM1078v1 The University of Tokyo GCA_000010785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1/ na assembly from type material na haploid bacteria 1743135 1743135 44.000000 1 1 1 NCBI RefSeq GCF_000010785.1-RS_2025_05_05 2025-05-05 1960 1897 49 20348262 GCF_000010805.1 PRJNA224116 SAMD00060964 na na 632772 37919 Rhodococcus opacus B4 strain=B4 na latest Complete Genome Major Full 2009-04-01 ASM1080v1 National Institute of Technology and Evaluation GCA_000010805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/805/GCF_000010805.1_ASM1080v1/ na na na haploid bacteria 8834939 8834939 67.500000 6 6 6 NCBI RefSeq GCF_000010805.1-RS_2025_03_15 2025-03-15 8251 7973 64 16233805;16233810 GCF_000010825.1 PRJNA224116 SAMD00060943 na na 634452 438 Acetobacter pasteurianus IFO 3283-01 strain=IFO 3283 substr. IFO 3283-01 na latest Complete Genome Major Full 2009-08-26 ASM1082v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1/ na na na haploid bacteria 3340249 3340249 53.000000 7 7 7 NCBI RefSeq GCF_000010825.1-RS_2024_12_15 2024-12-15 3133 2932 76 19638423 GCF_000010845.1 PRJNA224116 SAMD00060944 na na 634453 438 Acetobacter pasteurianus IFO 3283-03 strain=IFO 3283 substr. IFO 3283-03 na latest Complete Genome Major Full 2009-08-26 ASM1084v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/845/GCF_000010845.1_ASM1084v1/ na na na haploid bacteria 3339669 3339669 53.000000 7 7 7 NCBI RefSeq GCF_000010845.1-RS_2024_12_15 2024-12-15 3132 2931 76 19638423 GCF_000010865.1 PRJNA224116 SAMD00060945 na na 634454 438 Acetobacter pasteurianus IFO 3283-07 strain=IFO 3283 substr. IFO 3283-07 na latest Complete Genome Major Full 2009-08-26 ASM1086v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/865/GCF_000010865.1_ASM1086v1/ na na na haploid bacteria 3338426 3338426 53.000000 7 7 7 NCBI RefSeq GCF_000010865.1-RS_2024_12_15 2024-12-15 3127 2926 76 19638423 GCF_000010885.1 PRJNA224116 SAMD00060946 na na 634455 438 Acetobacter pasteurianus IFO 3283-22 strain=IFO 3283 substr. IFO 3283-22 na latest Complete Genome Major Full 2009-08-26 ASM1088v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/885/GCF_000010885.1_ASM1088v1/ na na na haploid bacteria 3339649 3339649 53.000000 7 7 7 NCBI RefSeq GCF_000010885.1-RS_2024_12_15 2024-12-15 3130 2929 76 19638423 GCF_000010905.1 PRJNA224116 SAMD00060947 na na 634456 438 Acetobacter pasteurianus IFO 3283-26 strain=IFO 3283 substr. IFO 3283-26 na latest Complete Genome Major Full 2009-08-26 ASM1090v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/905/GCF_000010905.1_ASM1090v1/ na na na haploid bacteria 3339683 3339683 53.000000 7 7 7 NCBI RefSeq GCF_000010905.1-RS_2024_12_15 2024-12-15 3130 2929 76 19638423 GCF_000010925.1 PRJNA224116 SAMD00060948 na na 634457 438 Acetobacter pasteurianus IFO 3283-32 strain=IFO 3283 substr. IFO 3283-32 na latest Complete Genome Major Full 2009-08-26 ASM1092v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/925/GCF_000010925.1_ASM1092v1/ na na na haploid bacteria 3337040 3337040 53.000000 7 7 7 NCBI RefSeq GCF_000010925.1-RS_2024_12_15 2024-12-15 3128 2928 76 19638423 GCF_000010945.1 PRJNA224116 SAMD00060949 na na 634458 438 Acetobacter pasteurianus IFO 3283-01-42C strain=IFO 3283 substr. IFO 3283-01-42C na latest Complete Genome Major Full 2009-08-26 ASM1094v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/945/GCF_000010945.1_ASM1094v1/ na na na haploid bacteria 3247995 3247995 53.000000 7 7 7 NCBI RefSeq GCF_000010945.1-RS_2024_12_15 2024-12-15 3059 2871 70 19638423 GCF_000010965.1 PRJNA224116 SAMD00061107 na na 634459 438 Acetobacter pasteurianus IFO 3283-12 strain=IFO 3283 substr. IFO 3283-12 na latest Complete Genome Major Full 2009-08-26 ASM1096v1 Acetobacter pasteurianus genome sequencing consortium GCA_000010965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/965/GCF_000010965.1_ASM1096v1/ na na na haploid bacteria 3336990 3336990 53.000000 7 7 7 NCBI RefSeq GCF_000010965.1-RS_2024_12_15 2024-12-15 3131 2931 76 19638423 GCF_000010985.1 PRJNA224116 SAMD00060965 na reference genome 639282 197162 Deferribacter desulfuricans SSM1 strain=SSM1 na latest Complete Genome Major Full 2010-03-05 ASM1098v1 Japan Agency for Marine-Earth Science and Technology GCA_000010985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1/ na assembly from type material na haploid bacteria 2542933 2542933 30.500000 2 2 2 NCBI RefSeq GCF_000010985.1-RS_2024_12_11 2024-12-11 2528 2461 53 12807210;20189949 GCF_000011005.1 PRJNA224116 SAMD00060931 na reference genome 304371 570267 Methanocella paludicola SANAE strain=SANAE na latest Complete Genome Major Full 2009-12-25 ASM1100v1 NITE GCA_000011005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/005/GCF_000011005.1_ASM1100v1/ na assembly from type material na haploid archaea 2957635 2957635 55.000000 1 1 1 NCBI RefSeq GCF_000011005.1-RS_2024_10_21 2024-10-21 3107 3037 59 17483259;18398197 GCF_000011025.1 PRJNA224116 SAMD00060968 na na 680646 43675 Rothia mucilaginosa DY-18 strain=DY-18 na latest Complete Genome Major Full 2010-01-05 ASM1102v1 Department of Bacteriology, Osaka Dental University GCA_000011025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1/ na na na haploid bacteria 2264603 2264603 59.500000 1 1 1 NCBI RefSeq GCF_000011025.1-RS_2025_02_10 2025-02-10 1772 1702 61 na GCF_000011045.1 PRJNA224116 SAMD00060969 na na 568703 47715 Lacticaseibacillus rhamnosus GG strain=ATCC 53103 na latest Complete Genome Major Full 2009-09-25 ASM1104v1 University of Tokyo GCA_000011045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/045/GCF_000011045.1_ASM1104v1/ na na na haploid bacteria 3005051 3005051 46.500000 1 1 1 NCBI RefSeq GCF_000011045.1-RS_2025_04_04 2025-04-04 2814 2686 77 19820099;24116025 GCF_000011065.1 PRJNA224116 SAMN02604314 na na 226186 818 Bacteroides thetaiotaomicron VPI-5482 strain=VPI-5482 na latest Complete Genome Major Full 2003-03-28 ASM1106v1 Washington University Department of Molecular Biology and Pharmacology GCA_000011065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1/ na assembly from type material na haploid bacteria 6293399 6293399 43.000000 2 2 2 NCBI RefSeq GCF_000011065.1-RS_2024_09_05 2024-09-05 4888 4687 87 12663928;19321416 GCF_000011085.1 PRJNA224116 SAMN02603385 na reference genome 272569 2238 Haloarcula marismortui ATCC 43049 strain=ATCC 43049 na latest Complete Genome Major Full 2004-11-02 ASM1108v1 Institute for Systems Biology GCA_000011085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/085/GCF_000011085.1_ASM1108v1/ na assembly from type material na haploid archaea 4274642 4274642 61.000000 9 9 9 NCBI RefSeq GCF_000011085.1-RS_2024_10_21 2024-10-21 4409 4248 62 15520287 GCF_000011105.1 PRJNA224116 SAMD00061090 na reference genome 70601 53953 Pyrococcus horikoshii OT3 strain=OT3 na latest Complete Genome Major Full 2004-05-11 ASM1110v1 NITE GCA_000011105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/105/GCF_000011105.1_ASM1110v1/ na assembly from type material na haploid archaea 1738505 1738505 42.000000 1 1 1 NCBI RefSeq GCF_000011105.1-RS_2024_10_21 2024-10-21 1943 1857 70 9679194 GCF_000011125.1 PRJNA224116 SAMD00061092 na reference genome 272557 56636 Aeropyrum pernix K1 strain=K1 na latest Complete Genome Major Full 2006-10-11 ASM1112v1 NITE GCA_000011125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/125/GCF_000011125.1_ASM1112v1/ na assembly from type material na haploid archaea 1669696 1669696 56.500000 1 1 1 NCBI RefSeq GCF_000011125.1-RS_2024_12_09 2024-12-09 1763 1704 51 10382966;16455681;16769697 GCF_000011145.1 PRJNA224116 SAMD00061093 na na 272558 86665 Halalkalibacterium halodurans C-125 strain=C-125 na latest Complete Genome Major Full 2004-05-11 ASM1114v1 JAMSTEC GCA_000011145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/145/GCF_000011145.1_ASM1114v1/ na na na haploid bacteria 4202352 4202352 43.500000 1 1 1 NCBI RefSeq GCF_000011145.1-RS_2025_03_31 2025-03-31 4188 3989 108 10086841;10086842;10192928;10427704;10484179;10805564;10972189;11058132;27385575 GCF_000011165.1 PRJNA224116 SAMD00061097 na na 138677 83558 Chlamydia pneumoniae J138 strain=J138 na latest Complete Genome Major Full 2004-05-11 ASM1116v1 Yamaguchi/Kyushu U. GCA_000011165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/165/GCF_000011165.1_ASM1116v1/ na na na haploid bacteria 1226565 1226565 40.500000 1 1 1 NCBI RefSeq GCF_000011165.1-RS_2025_02_16 2025-02-16 1092 1032 44 10839753;10871362 GCF_000011185.1 PRJNA224116 SAMD00061089 na reference genome 273116 50339 Thermoplasma volcanium GSS1 strain=GSS1 na latest Complete Genome Major Full 2004-05-11 ASM1118v1 National Institute of Advanced Industrial Science and Technology, Japan GCA_000011185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/185/GCF_000011185.1_ASM1118v1/ na assembly from type material na haploid archaea 1584804 1584804 40.000000 1 1 1 NCBI RefSeq GCF_000011185.1-RS_2024_10_21 2024-10-21 1664 1586 51 11121031 GCF_000011205.1 PRJNA224116 SAMD00061096 na reference genome 273063 111955 Sulfurisphaera tokodaii str. 7 strain=7 na latest Complete Genome Major Full 2004-05-11 ASM1120v1 NITE GCA_000011205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/205/GCF_000011205.1_ASM1120v1/ na assembly from type material na haploid archaea 2694756 2694756 33.000000 1 1 1 NCBI RefSeq GCF_000011205.1-RS_2025_03_28 2025-03-28 3024 2863 51 11572479 GCF_000011225.1 PRJNA224116 SAMD00061084 na reference genome 272633 28227 Malacoplasma penetrans HF-2 strain=HF-2 na latest Complete Genome Major Full 2004-05-11 ASM1122v1 NIID Japan GCA_000011225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/225/GCF_000011225.1_ASM1122v1/ na na na haploid bacteria 1358633 1358633 25.500000 1 1 1 NCBI RefSeq GCF_000011225.1-RS_2024_12_09 2024-12-09 1070 1022 36 12466555 GCF_000011245.1 PRJNA224116 SAMD00061101 na reference genome 221109 182710 Oceanobacillus iheyensis HTE831 strain=HTE831 na latest Complete Genome Major Full 2004-02-19 ASM1124v1 JAMSTEC GCA_000011245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/245/GCF_000011245.1_ASM1124v1/ na assembly from type material na haploid bacteria 3630528 3630528 35.500000 1 1 1 NCBI RefSeq GCF_000011245.1-RS_2024_12_11 2024-12-11 3628 3491 97 11750818;12235376 GCF_000011265.1 PRJNA224116 SAMD00061104 na na 196620 1280 Staphylococcus aureus subsp. aureus MW2 strain=MW2 na latest Complete Genome Major Full 2004-05-11 ASM1126v1 NITE GCA_000011265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/265/GCF_000011265.1_ASM1126v1/ na na na haploid bacteria 2820462 2820462 33.000000 1 1 1 NCBI RefSeq GCF_000011265.1-RS_2025_03_15 2025-03-15 2791 2646 82 12044378 GCF_000011285.1 PRJNA224116 SAMD00061102 na na 193567 1314 Streptococcus pyogenes SSI-1 strain=SSI-1 na latest Complete Genome Major Full 2004-05-11 ASM1128v1 Osaka Univ. GCA_000011285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/285/GCF_000011285.1_ASM1128v1/ na na na haploid bacteria 1894275 1894275 38.500000 1 1 1 NCBI RefSeq GCF_000011285.1-RS_2025_02_16 2025-02-16 1958 1816 76 12799345 GCF_000011305.1 PRJNA224116 SAMD00061103 na reference genome 196164 152794 Corynebacterium efficiens YS-314 strain=YS-314 na latest Complete Genome Major Full 2004-05-11 ASM1130v1 NITE GCA_000011305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/305/GCF_000011305.1_ASM1130v1/ na assembly from type material na haploid bacteria 3219505 3219505 63.000000 3 3 3 NCBI RefSeq GCF_000011305.1-RS_2024_12_11 2024-12-11 2958 2833 74 12840036 GCF_000011325.1 PRJNA224116 SAMD00061105 na reference genome 196627 1718 Corynebacterium glutamicum ATCC 13032 strain=ATCC 13032 na latest Complete Genome Major Full 2004-02-18 ASM1132v1 Kitasato Univ. GCA_000011325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/325/GCF_000011325.1_ASM1132v1/ na assembly from type material na haploid bacteria 3309401 3309401 54.000000 1 1 1 NCBI RefSeq GCF_000011325.1-RS_2024_12_11 2024-12-11 3079 2948 80 na GCF_000011345.1 PRJNA224116 SAMD00061106 na reference genome 197221 146786 Thermosynechococcus vestitus BP-1 strain=BP-1 na latest Complete Genome Major Full 2004-05-11 ASM1134v1 Kazusa GCA_000011345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/345/GCF_000011345.1_ASM1134v1/ na assembly from type material na haploid bacteria 2593857 2593857 54.000000 1 1 1 NCBI RefSeq GCF_000011345.1-RS_2025_04_07 2025-04-07 2547 2449 47 12240834 GCF_000011365.1 PRJNA224116 SAMD00061083 na na 224911 1355477 Bradyrhizobium diazoefficiens USDA 110 strain=USDA110 na latest Complete Genome Major Full 2004-05-11 ASM1136v1 Kazusa GCA_000011365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/365/GCF_000011365.1_ASM1136v1/ na assembly from type material na haploid bacteria 9105828 9105828 64.000000 1 1 1 NCBI RefSeq GCF_000011365.1-RS_2025_04_08 2025-04-08 8578 8273 60 12597275;12597279 GCF_000011385.1 PRJNA224116 SAMD00061120 na reference genome 251221 33072 Gloeobacter violaceus PCC 7421 strain=PCC 7421 na latest Complete Genome Major Full 2003-10-03 ASM1138v1 Kazusa GCA_000011385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/385/GCF_000011385.1_ASM1138v1/ na assembly from type material na haploid bacteria 4659019 4659019 62.000000 1 1 1 NCBI RefSeq GCF_000011385.1-RS_2024_12_11 2024-12-11 4603 4488 50 14621292;14621296 GCF_000011405.1 PRJNA224116 SAMN02641482 na na 393011 263 Francisella tularensis subsp. holarctica OSU18 strain=OSU18 na latest Complete Genome Major Full 2008-10-17 ASM1140v1 University of Maryland College Park GCA_000011405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/405/GCF_000011405.1_ASM1140v1/ na na na haploid bacteria 1895727 1895727 32.000000 1 1 1 NCBI RefSeq GCF_000011405.1-RS_2025_04_16 2025-04-16 1975 1612 52 18927608 GCF_000011425.1 PRJNA848821 SAMEA2272224 na reference genome 227321 162425 Aspergillus nidulans FGSC A4 strain=FGSC A4 na latest Chromosome Major Full 2009-09-24 ASM1142v1 Eurofungbase (Eurofung) GCA_000011425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/425/GCF_000011425.1_ASM1142v1/ na na na haploid fungi 29828291 29817824 50.500000 8 8 82 Eurofungbase (Eurofung) Annotation submitted by Eurofungbase (Eurofung) 2025-09-15 10516 10453 0 19146970 GCF_000011445.1 PRJNA224116 SAMEA3138208 na na 272632 2102 Mycoplasma mycoides subsp. mycoides SC str. PG1 strain=PG1 na latest Complete Genome Major Full 2007-02-27 ASM1144v1 Royal Institute of Technology, Stockholm, Sweden GCA_000011445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/445/GCF_000011445.1_ASM1144v1/ na assembly from type material na haploid bacteria 1211703 1211703 24.000000 1 1 1 NCBI RefSeq GCF_000011445.1-RS_2025_02_25 2025-02-25 1106 940 39 14762060 GCF_000011465.1 PRJNA224116 SAMEA3138209 na na 59919 1219 Prochlorococcus marinus subsp. pastoris str. CCMP1986 strain=MED4 na latest Complete Genome Major Full 2003-08-18 ASM1146v1 DOE Joint Genome Institute GCA_000011465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/465/GCF_000011465.1_ASM1146v1/ na assembly from type material na haploid bacteria 1657990 1657990 31.000000 1 1 1 NCBI RefSeq GCF_000011465.1-RS_2025_01_23 2025-01-23 1924 1877 43 12917642 GCF_000011485.1 PRJNA224116 SAMEA3138210 na na 74547 1219 Prochlorococcus marinus str. MIT 9313 strain=MIT9313 na latest Complete Genome Major Full 2003-08-18 ASM1148v1 DOE Joint Genome Institute GCA_000011485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/485/GCF_000011485.1_ASM1148v1/ na na na haploid bacteria 2410873 2410873 50.500000 1 1 1 NCBI RefSeq GCF_000011485.1-RS_2025_03_11 2025-03-11 2474 2389 53 12917642 GCF_000011505.1 PRJNA224116 SAMEA1705935 na na 282458 1280 Staphylococcus aureus subsp. aureus MRSA252 strain=MRSA252 na latest Complete Genome Major Full 2004-06-25 ASM1150v1 Sanger Institute GCA_000011505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/505/GCF_000011505.1_ASM1150v1/ na na na haploid bacteria 2902619 2902619 33.000000 1 1 1 NCBI RefSeq GCF_000011505.1-RS_2025_03_18 2025-03-18 2884 2690 79 15213324 GCF_000011525.1 PRJNA224116 SAMEA1705922 na na 282459 1280 Staphylococcus aureus subsp. aureus MSSA476 strain=MSSA476 na latest Complete Genome Major Full 2004-06-25 ASM1152v1 Sanger Institute GCA_000011525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/525/GCF_000011525.1_ASM1152v1/ na na na haploid bacteria 2820454 2820454 33.000000 2 2 2 NCBI RefSeq GCF_000011525.1-RS_2025_03_15 2025-03-15 2791 2645 81 15213324 GCF_000011545.1 PRJNA224116 SAMEA1705938 na na 272560 28450 Burkholderia pseudomallei K96243 strain=K96243 na latest Complete Genome Major Full 2004-09-16 ASM1154v1 Sanger Institute GCA_000011545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/545/GCF_000011545.1_ASM1154v1/ na na na haploid bacteria 7247547 7247547 68.000000 2 2 2 NCBI RefSeq GCF_000011545.1-RS_2025_02_10 2025-02-10 6502 6298 77 15377794 GCF_000011565.2 PRJNA224116 SAMEA3138214 na reference genome 264201 362787 Candidatus Protochlamydia amoebophila UWE25 strain=UWE25 na latest Complete Genome Major Full 2019-06-22 ASM1156v2 University of Vienna, Austria GCA_000011565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/565/GCF_000011565.2_ASM1156v2/ na assembly from type material na haploid bacteria 2438912 2438912 35.000000 1 1 1 NCBI RefSeq GCF_000011565.2-RS_2026_03_31 2026-03-31 2005 1862 49 15073324 GCF_000011585.1 PRJNA224116 SAMEA3138215 na na 267377 39152 Methanococcus maripaludis S2 strain=S2 na latest Complete Genome Major Full 2004-03-04 ASM1158v1 University of Washington GCA_000011585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/585/GCF_000011585.1_ASM1158v1/ na na na haploid archaea 1661137 1661137 33.000000 1 1 1 NCBI RefSeq GCF_000011585.1-RS_2024_10_21 2024-10-21 1799 1741 50 15466049 GCF_000011605.1 PRJNA224116 SAMEA1705920 na na 218491 29471 Pectobacterium atrosepticum SCRI1043 strain=SCRI1043 na latest Complete Genome Major Full 2004-07-01 ASM1160v1 Sanger Institute GCA_000011605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/605/GCF_000011605.1_ASM1160v1/ na na na haploid bacteria 5064019 5064019 51.000000 1 1 1 NCBI RefSeq GCF_000011605.1-RS_2025_02_10 2025-02-10 4572 4394 108 na GCF_000011625.1 PRJNA224116 SAMN02598269 na na 288681 1396 Bacillus cereus E33L strain=E33L na latest Complete Genome Major Full 2004-09-10 ASM1162v1 DOE Joint Genome Institute GCA_000011625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/625/GCF_000011625.1_ASM1162v1/ na na na haploid bacteria 5843235 5843235 35.000000 6 6 6 NCBI RefSeq GCF_000011625.1-RS_2024_11_05 2024-11-05 6030 5670 140 16621833 GCF_000011645.1 PRJNA224116 SAMN02603685 na na 279010 1402 Bacillus licheniformis DSM 13 = ATCC 14580 strain=ATCC 14580; DSM 13 na latest Complete Genome Major Full 2007-04-26 ASM1164v1 Novozymes Biotech GCA_000011645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/645/GCF_000011645.1_ASM1164v1/ na assembly from type material na haploid bacteria 4222597 4222597 46.000000 1 1 1 NCBI RefSeq GCF_000011645.1-RS_2025_03_02 2025-03-02 4374 4175 98 15461803 GCF_000011665.1 PRJNA224116 SAMN02603497 na na 286636 1314 Streptococcus pyogenes MGAS10394 strain=MGAS10394 na latest Complete Genome Major Full 2004-08-03 ASM1166v1 Lab of Human Bacterial Pathogenesis GCA_000011665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/665/GCF_000011665.1_ASM1166v1/ na na na haploid bacteria 1899877 1899877 38.500000 1 1 1 NCBI RefSeq GCF_000011665.1-RS_2025_01_03 2025-01-03 1923 1754 89 15272401 GCF_000011685.1 PRJNA224116 SAMN02603293 na na 290633 442 Gluconobacter oxydans 621H strain=621H na latest Complete Genome Major Full 2005-01-21 ASM1168v1 Gottingen Genomics Laboratory GCA_000011685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/685/GCF_000011685.1_ASM1168v1/ na na na haploid bacteria 2922384 2922384 61.000000 6 6 6 NCBI RefSeq GCF_000011685.1-RS_2024_12_15 2024-12-15 2856 2707 72 15665824 GCF_000011705.1 PRJNA224116 SAMN02603987 na na 243160 13373 Burkholderia mallei ATCC 23344 strain=ATCC 23344 na latest Complete Genome Major Full 2004-09-22 ASM1170v1 TIGR GCA_000011705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/705/GCF_000011705.1_ASM1170v1/ na assembly from type material na haploid bacteria 5835527 5835527 68.500000 2 2 2 NCBI RefSeq GCF_000011705.1-RS_2025_03_29 2025-03-29 5296 4964 71 15377793 GCF_000011725.1 PRJNA224116 SAMN02603300 na na 290847 210 Helicobacter pylori 51 strain=51 na latest Complete Genome Major Full 2009-10-21 ASM1172v1 Gyeongsang National University College of Medicine and 21c Frontier Human Functional Genome Research Project GCA_000011725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/725/GCF_000011725.1_ASM1172v1/ na na na haploid bacteria 1589954 1589954 39.000000 1 1 1 NCBI RefSeq GCF_000011725.1-RS_2025_01_10 2025-01-10 1544 1408 45 na GCF_000011745.1 PRJNA224116 SAMN02603465 na reference genome 291272 101534 Candidatus Blochmanniella pennsylvanica str. BPEN strain=BPEN na latest Complete Genome Major Full 2005-08-04 ASM1174v1 Josephine Bay Paul Center GCA_000011745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/745/GCF_000011745.1_ASM1174v1/ na na na haploid bacteria 791654 791654 29.500000 1 1 1 NCBI RefSeq GCF_000011745.1-RS_2025_03_17 2025-03-17 663 607 45 16077009 GCF_000011765.3 PRJNA224116 SAMN02603500 na na 293653 1314 Streptococcus pyogenes MGAS5005 strain=MGAS5005 na latest Complete Genome Minor Full 2014-04-01 ASM1176v2 Lab of Human Bacterial Pathogenesis GCA_000011765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/765/GCF_000011765.3_ASM1176v2/ na na na haploid bacteria 1838562 1838562 38.500000 1 1 1 NCBI RefSeq GCF_000011765.3-RS_2026_03_28 2026-03-28 1852 1702 89 16088826;24733896 GCF_000011805.1 PRJNA224116 SAMN02604303 na reference genome 312309 668 Aliivibrio fischeri ES114 strain=ES114 na latest Complete Genome Major Full 2008-04-02 ASM1180v1 W.M. Keck Microbial Communities and Cell-signaling Program GCA_000011805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/805/GCF_000011805.1_ASM1180v1/ na na na haploid bacteria 4273718 4273718 38.500000 3 3 3 NCBI RefSeq GCF_000011805.1-RS_2025_03_27 2025-03-27 3953 3748 160 15703294;18366731 GCF_000011825.1 PRJNA224116 SAMN02604079 na na 264199 1308 Streptococcus thermophilus LMG 18311 strain=LMG 18311 na latest Complete Genome Major Full 2004-11-15 ASM1182v1 Univ. Catholique de Louvain, Belgium GCA_000011825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/825/GCF_000011825.1_ASM1182v1/ na na na haploid bacteria 1796846 1796846 39.000000 1 1 1 NCBI RefSeq GCF_000011825.1-RS_2025_03_27 2025-03-27 1866 1540 89 15543133 GCF_000011845.1 PRJNA224116 SAMN02603344 na na 299768 1308 Streptococcus thermophilus CNRZ1066 strain=CNRZ1066 na latest Complete Genome Major Full 2004-11-15 ASM1184v1 Institut National de la Recherche Agronomique, France GCA_000011845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/845/GCF_000011845.1_ASM1184v1/ na na na haploid bacteria 1796226 1796226 39.000000 1 1 1 NCBI RefSeq GCF_000011845.1-RS_2025_03_27 2025-03-27 1885 1554 89 15543133 GCF_000011865.1 PRJNA224116 SAMN02604007 na na 195099 197 Campylobacter jejuni RM1221 strain=RM1221 na latest Complete Genome Major Full 2005-01-06 ASM1186v1 TIGR GCA_000011865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/865/GCF_000011865.1_ASM1186v1/ na na na haploid bacteria 1777831 1777831 30.500000 1 1 1 NCBI RefSeq GCF_000011865.1-RS_2025_05_22 2025-05-22 1891 1766 56 15660156 GCF_000011885.1 PRJNA224116 SAMN02604316 na na 295319 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 strain=ATCC 9150 na latest Complete Genome Major Full 2004-11-30 ASM1188v1 Washington University Genome Sequencing Center GCA_000011885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/885/GCF_000011885.1_ASM1188v1/ na na na haploid bacteria 4585229 4585229 52.000000 1 1 1 NCBI RefSeq GCF_000011885.1-RS_2025_02_20 2025-02-20 4488 4116 117 15531882 GCF_000011905.1 PRJNA224116 SAMN02603990 na reference genome 243164 61435 Dehalococcoides mccartyi 195 strain=195 na latest Complete Genome Major Full 2005-01-07 ASM1190v1 TIGR GCA_000011905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/905/GCF_000011905.1_ASM1190v1/ na assembly from type material na haploid bacteria 1469720 1469720 49.000000 1 1 1 NCBI RefSeq GCF_000011905.1-RS_2024_12_09 2024-12-09 1579 1510 51 15637277 GCF_000011925.1 PRJNA224116 SAMN02603975 na na 176279 1282 Staphylococcus epidermidis RP62A strain=RP62A na latest Complete Genome Major Full 2005-01-13 ASM1192v1 TIGR GCA_000011925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/925/GCF_000011925.1_ASM1192v1/ na na na haploid bacteria 2643840 2643840 32.000000 2 2 2 NCBI RefSeq GCF_000011925.1-RS_2025_04_15 2025-04-15 2538 2382 84 15774886 GCF_000011945.1 PRJNA224116 SAMN02604305 na na 234826 770 Anaplasma marginale str. St. Maries strain=St. Maries na latest Complete Genome Major Full 2004-12-06 ASM1194v1 Washington State University GCA_000011945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/945/GCF_000011945.1_ASM1194v1/ na na na haploid bacteria 1197687 1197687 50.000000 1 1 1 NCBI RefSeq GCF_000011945.1-RS_2025_01_08 2025-01-08 1010 942 44 15618402 GCF_000011965.2 PRJNA224116 SAMN02604003 na reference genome 246200 89184 Ruegeria pomeroyi DSS-3 strain=DSS-3 na latest Complete Genome Major Full 2013-12-10 ASM1196v2 TIGR GCA_000011965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/965/GCF_000011965.2_ASM1196v2/ na assembly from type material na haploid bacteria 4601048 4601048 64.000000 2 2 2 NCBI RefSeq GCF_000011965.2-RS_2025_04_07 2025-04-07 4480 4368 64 15602564;17526795;25780504 GCF_000011985.1 PRJNA224116 SAMN02603047 na na 272621 1579 Lactobacillus acidophilus NCFM strain=NCFM na latest Complete Genome Major Full 2007-11-01 ASM1198v1 Cal Poly. San Luis Obispo GCA_000011985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/985/GCF_000011985.1_ASM1198v1/ na na na haploid bacteria 1993560 1993560 34.500000 1 1 1 NCBI RefSeq GCF_000011985.1-RS_2025_03_27 2025-03-27 1933 1771 76 15671160 GCF_000012005.1 PRJNA224116 SAMN02603600 na na 300267 622 Shigella dysenteriae Sd197 strain=Sd197 na latest Complete Genome Major Full 2005-11-09 ASM1200v1 Microbial Genome Center of ChMPH GCA_000012005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/005/GCF_000012005.1_ASM1200v1/ na na na haploid bacteria 4560911 4560911 51.000000 3 3 3 NCBI RefSeq GCF_000012005.1-RS_2025_03_27 2025-03-27 4880 3643 113 16275786 GCF_000012025.1 PRJNA224116 SAMN02603601 na na 300268 621 Shigella boydii Sb227 strain=Sb227 na latest Complete Genome Major Full 2005-11-09 ASM1202v1 Microbial Genome Center of ChMPH GCA_000012025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/025/GCF_000012025.1_ASM1202v1/ na na na haploid bacteria 4646520 4646520 51.000000 2 2 2 NCBI RefSeq GCF_000012025.1-RS_2025_03_27 2025-03-27 4795 3899 121 16275786 GCF_000012045.1 PRJNA224116 SAMN02603996 na na 93062 1280 Staphylococcus aureus subsp. aureus COL strain=COL na latest Complete Genome Major Full 2005-01-08 ASM1204v1 TIGR GCA_000012045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/045/GCF_000012045.1_ASM1204v1/ na na na haploid bacteria 2813862 2813862 33.000000 2 2 2 NCBI RefSeq GCF_000012045.1-RS_2025_04_26 2025-04-26 2796 2649 75 15774886 GCF_000012065.2 PRJNA224116 SAMN02641559 na na 314723 140 Borrelia hermsii DAH strain=DAH na latest Chromosome Major Full 2012-05-10 ASM1206v2 Rocky Mountain Laboratories, NIAID, NIH GCA_000012065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/065/GCF_000012065.2_ASM1206v2/ na assembly from type material na haploid bacteria 1066225 1066225 30.000000 3 11 11 NCBI RefSeq GCF_000012065.2-RS_2026_04_04 2026-04-04 1041 937 38 na GCF_000012085.2 PRJNA224116 SAMN02603508 na reference genome 314724 142 Borrelia turicatae 91E135 strain=91E135 Oz1 latest Complete Genome Major Full 2006-12-22 ASM1208v2 Laboratory of Human Bacterial Pathenogenesis, Rocky Mountain Laboratories, NIAID GCA_000012085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/085/GCF_000012085.2_ASM1208v2/ na assembly designated as reftype na haploid bacteria 1165365 1165365 29.500000 9 9 9 NCBI RefSeq GCF_000012085.2-RS_2025_03_05 2025-03-05 1142 1058 38 8294872;9234797;10594835;16081922 GCF_000012105.1 PRJNA224116 SAMN02603125 na na 314565 339 Xanthomonas campestris pv. campestris str. 8004 strain=8004 na latest Complete Genome Major Full 2005-05-25 ASM1210v1 Chinese National HGC, Shanghai GCA_000012105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/105/GCF_000012105.1_ASM1210v1/ na na na haploid bacteria 5148708 5148708 65.000000 1 1 1 NCBI RefSeq GCF_000012105.1-RS_2025_05_07 2025-05-07 4480 4166 153 15899963 GCF_000012125.1 PRJNA224116 SAMN02603498 na na 315277 813 Chlamydia trachomatis A/HAR-13 strain=A/HAR-13 na latest Complete Genome Major Full 2005-09-23 ASM1212v1 Lab of Human Bacterial Pathogenesis GCA_000012125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/125/GCF_000012125.1_ASM1212v1/ na assembly from type material na haploid bacteria 1051969 1051969 41.500000 2 2 2 NCBI RefSeq GCF_000012125.1-RS_2024_09_18 2024-09-18 960 888 46 16177312 GCF_000012145.1 PRJNA224116 SAMN02603143 na na 315456 42862 Rickettsia felis Marseille-URRWFXCal2 strain=URRWXCal2; California 2 na latest Complete Genome Major Full 2005-06-07 ASM1214v1 CNRS GCA_000012145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/145/GCF_000012145.1_ASM1214v1/ na assembly from type material na haploid bacteria 1587240 1587240 32.500000 3 3 3 NCBI RefSeq GCF_000012145.1-RS_2026_05_13 2026-05-13 1659 1430 40 15984913 GCF_000012165.2 PRJNA224116 SAMN02603499 na na 319701 1314 Streptococcus pyogenes MGAS6180 strain=MGAS6180 na latest Complete Genome Major Full 2019-02-12 ASM1216v2 Lab of Human Bacterial Pathogenesis GCA_000012165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/165/GCF_000012165.2_ASM1216v2/ na na na haploid bacteria 1897578 1897578 38.500000 1 1 1 NCBI RefSeq GCF_000012165.2-RS_2024_12_11 2024-12-11 1913 1764 89 16088825 GCF_000012185.1 PRJNA224116 SAMN02603157 na na 281310 727 Haemophilus influenzae 86-028NP strain=86-028NP na latest Complete Genome Major Full 2007-08-30 ASM1218v1 Columbus Children's Research Institute and The Ohio State University, Pediatrics, USA GCA_000012185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/185/GCF_000012185.1_ASM1218v1/ na na na haploid bacteria 1914490 1914490 38.000000 1 1 1 NCBI RefSeq GCF_000012185.1-RS_2025_03_03 2025-03-03 1922 1785 81 15968074 GCF_000012205.1 PRJNA224116 SAMN02603162 na na 264730 29438 Pseudomonas savastanoi pv. phaseolicola 1448A strain=1448A; BAA-978 na latest Complete Genome Major Full 2005-08-01 ASM1220v1 Cornell University GCA_000012205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/205/GCF_000012205.1_ASM1220v1/ na na na haploid bacteria 6112448 6112448 58.000000 3 3 3 NCBI RefSeq GCF_000012205.1-RS_2025_03_15 2025-03-15 5597 5089 83 16159782 GCF_000012225.1 PRJNA224116 SAMN02603687 na na 322098 229545 Aster yellows witches'-broom phytoplasma AYWB strain=AYWB na latest Complete Genome Major Full 2006-01-11 ASM1222v1 Ohio State University GCA_000012225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/225/GCF_000012225.1_ASM1222v1/ na na na haploid bacteria 723970 723970 27.000000 5 5 5 NCBI RefSeq GCF_000012225.1-RS_2025_04_26 2025-04-26 709 603 41 16672622 GCF_000012245.1 PRJNA224116 SAMN02604347 na na 205918 317 Pseudomonas syringae pv. syringae B728a strain=B728a na latest Complete Genome Major Full 2005-05-12 ASM1224v1 DOE Joint Genome Institute GCA_000012245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/245/GCF_000012245.1_ASM1224v1/ na na na haploid bacteria 6093698 6093698 59.000000 1 1 1 NCBI RefSeq GCF_000012245.1-RS_2025_04_15 2025-04-15 5303 5087 84 16043691 GCF_000012265.1 PRJNA224116 SAMN02604012 na na 220664 380021 Pseudomonas protegens Pf-5 strain=Pf-5 na latest Complete Genome Major Full 2005-06-30 ASM1226v1 TIGR GCA_000012265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/265/GCF_000012265.1_ASM1226v1/ na na na haploid bacteria 7074893 7074893 63.500000 1 1 1 NCBI RefSeq GCF_000012265.1-RS_2025_03_27 2025-03-27 6442 6264 90 15980861 GCF_000012285.1 PRJNA224116 SAMN02603173 na reference genome 330779 2285 Sulfolobus acidocaldarius DSM 639 strain=DSM 639 na latest Complete Genome Major Full 2005-07-05 ASM1228v1 Danish Archaea Centre GCA_000012285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/285/GCF_000012285.1_ASM1228v1/ na assembly from type material na haploid archaea 2225959 2225959 36.500000 1 1 1 NCBI RefSeq GCF_000012285.1-RS_2025_03_29 2025-03-29 2370 2290 51 15995215 GCF_000012305.1 PRJNA224116 SAMN02598544 na reference genome 259536 334543 Psychrobacter arcticus 273-4 strain=273-4 na latest Complete Genome Major Full 2005-07-20 ASM1230v1 DOE Joint Genome Institute GCA_000012305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/305/GCF_000012305.1_ASM1230v1/ na assembly from type material na haploid bacteria 2650701 2650701 43.000000 1 1 1 NCBI RefSeq GCF_000012305.1-RS_2024_11_26 2024-11-26 2265 2148 64 20154119 GCF_000012325.1 PRJNA224116 SAMN02604001 na reference genome 167879 28229 Colwellia psychrerythraea 34H strain=34H; BAA-681 na latest Complete Genome Major Full 2005-07-26 ASM1232v1 TIGR GCA_000012325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/325/GCF_000012325.1_ASM1232v1/ na na na haploid bacteria 5373180 5373180 38.000000 1 1 1 NCBI RefSeq GCF_000012325.1-RS_2025_03_27 2025-03-27 4584 4425 120 16043709 GCF_000012345.1 PRJNA224116 SAMN02603690 na reference genome 335992 198252 Candidatus Pelagibacter ubique HTCC1062 strain=HTCC1062 na latest Complete Genome Major Full 2005-07-22 ASM1234v1 Oregon State University GCA_000012345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/345/GCF_000012345.1_ASM1234v1/ na assembly from type material na haploid bacteria 1308759 1308759 29.500000 1 1 1 NCBI RefSeq GCF_000012345.1-RS_2025_06_01 2025-06-01 1382 1344 36 16109880;16267553 GCF_000012365.1 PRJNA224116 SAMN02604021 na reference genome 271848 57975 Burkholderia thailandensis E264 strain=E264; ATCC 700388 na latest Complete Genome Major Full 2005-12-15 ASM1236v1 TIGR GCA_000012365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/365/GCF_000012365.1_ASM1236v1/ na assembly from type material na haploid bacteria 6723972 6723972 67.500000 2 2 2 NCBI RefSeq GCF_000012365.1-RS_2024_12_09 2024-12-09 5916 5662 76 16336651 GCF_000012385.1 PRJNA224116 SAMN02603144 na reference genome 336407 33990 Rickettsia bellii RML369-C strain=RML369-C na latest Complete Genome Major Full 2006-04-05 ASM1238v1 CNRS GCA_000012385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/385/GCF_000012385.1_ASM1238v1/ na assembly from type material na haploid bacteria 1522076 1522076 31.500000 1 1 1 NCBI RefSeq GCF_000012385.1-RS_2025_01_08 2025-01-08 1539 1426 40 16703114 GCF_000012405.1 PRJNA224116 SAMN02598543 na reference genome 269800 2021 Thermobifida fusca YX strain=YX na latest Complete Genome Major Full 2005-08-08 ASM1240v1 DOE Joint Genome Institute GCA_000012405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/405/GCF_000012405.1_ASM1240v1/ na na na haploid bacteria 3642249 3642249 67.500000 1 1 1 NCBI RefSeq GCF_000012405.1-RS_2024_10_21 2024-10-21 3167 3083 67 17209016 GCF_000012445.1 PRJNA224116 SAMN02598267 na na 205922 294 Pseudomonas fluorescens Pf0-1 strain=Pf0-1 na latest Complete Genome Major Full 2009-07-15 ASM1244v1 DOE Joint Genome Institute GCA_000012445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/445/GCF_000012445.1_ASM1244v1/ na na na haploid bacteria 6438405 6438405 60.500000 1 1 1 NCBI RefSeq GCF_000012445.1-RS_2025_04_26 2025-04-26 5887 5716 96 19432983 GCF_000012465.1 PRJNA224116 SAMN00623057 na na 59920 1219 Prochlorococcus marinus str. NATL2A strain=NATL2A na latest Complete Genome Major Full 2007-08-09 ASM1246v1 DOE Joint Genome Institute GCA_000012465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/465/GCF_000012465.1_ASM1246v1/ na na na haploid bacteria 1842899 1842899 35.000000 1 1 1 NCBI RefSeq GCF_000012465.1-RS_2025_05_23 2025-05-23 2108 2058 45 18159947 GCF_000012485.1 PRJNA224116 SAMN02598284 na reference genome 319225 1100 Pelodictyon luteolum DSM 273 strain=DSM 273 na latest Complete Genome Major Full 2005-10-26 ASM1248v1 DOE Joint Genome Institute GCA_000012485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/485/GCF_000012485.1_ASM1248v1/ na assembly from type material na haploid bacteria 2364842 2364842 57.500000 1 1 1 NCBI RefSeq GCF_000012485.1-RS_2025_03_28 2025-03-28 2231 2144 57 na GCF_000012505.1 PRJNA224116 SAMN02598312 na na 316279 316279 Synechococcus sp. CC9902 strain=CC9902 na latest Complete Genome Major Full 2005-10-26 ASM1250v1 DOE Joint Genome Institute GCA_000012505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/505/GCF_000012505.1_ASM1250v1/ na na na haploid bacteria 2234828 2234828 54.000000 1 1 1 NCBI RefSeq GCF_000012505.1-RS_2024_08_13 2024-08-13 2445 2383 53 na GCF_000012525.1 PRJNA224116 SAMN02598254 na na 1140 32046 Synechococcus elongatus PCC 7942 = FACHB-805 strain=PCC 7942 na latest Complete Genome Major Full 2005-11-08 ASM1252v1 DOE Joint Genome Institute GCA_000012525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/525/GCF_000012525.1_ASM1252v1/ na na na haploid bacteria 2742269 2742269 55.500000 2 2 2 NCBI RefSeq GCF_000012525.1-RS_2025_04_10 2025-04-10 2775 2711 55 na GCF_000012545.1 PRJNA224116 SAMN02604180 na reference genome 339860 2317 Methanosphaera stadtmanae DSM 3091 strain=DSM 3091 na latest Complete Genome Major Full 2006-01-05 ASM1254v1 University of Goettingen GCA_000012545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/545/GCF_000012545.1_ASM1254v1/ na assembly from type material na haploid archaea 1767403 1767403 27.500000 1 1 1 NCBI RefSeq GCF_000012545.1-RS_2024_10_21 2024-10-21 1614 1553 55 16385054 GCF_000012565.1 PRJNA224116 SAMN02598261 na reference genome 269484 944 Ehrlichia canis str. Jake strain=Jake na latest Complete Genome Major Full 2005-08-12 ASM1256v1 DOE Joint Genome Institute GCA_000012565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/565/GCF_000012565.1_ASM1256v1/ na na na haploid bacteria 1315030 1315030 29.000000 1 1 1 NCBI RefSeq GCF_000012565.1-RS_2025_01_08 2025-01-08 993 941 42 na GCF_000012625.1 PRJNA224116 SAMN02598311 na na 110662 110662 Synechococcus sp. CC9605 strain=CC9605 na latest Complete Genome Major Full 2005-10-27 ASM1262v1 DOE Joint Genome Institute GCA_000012625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/625/GCF_000012625.1_ASM1262v1/ na na na haploid bacteria 2510659 2510659 59.000000 1 1 1 NCBI RefSeq GCF_000012625.1-RS_2024_09_15 2024-09-15 2847 2773 55 na GCF_000012645.1 PRJNA224116 SAMN02598321 na na 74546 1219 Prochlorococcus marinus str. MIT 9312 strain=MIT 9312 na latest Complete Genome Major Full 2005-11-02 ASM1264v1 DOE Joint Genome Institute GCA_000012645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/645/GCF_000012645.1_ASM1264v1/ na na na haploid bacteria 1709204 1709204 31.000000 1 1 1 NCBI RefSeq GCF_000012645.1-RS_2025_01_27 2025-01-27 1921 1876 44 na GCF_000012665.1 PRJNA224116 SAMN02598492 na reference genome 207559 58180 Oleidesulfovibrio alaskensis G20 strain=G20 na latest Complete Genome Major Full 2005-10-28 ASM1266v1 DOE Joint Genome Institute GCA_000012665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/665/GCF_000012665.1_ASM1266v1/ na na na haploid bacteria 3730232 3730232 58.000000 1 1 1 NCBI RefSeq GCF_000012665.1-RS_2025_03_28 2025-03-28 3381 3266 83 21685289 GCF_000012685.1 PRJNA224116 SAMN02604018 na reference genome 246197 34 Myxococcus xanthus DK 1622 strain=DK 1622 na latest Complete Genome Major Full 2006-06-07 ASM1268v1 TIGR GCA_000012685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/685/GCF_000012685.1_ASM1268v1/ na na na haploid bacteria 9139763 9139763 69.000000 1 1 1 NCBI RefSeq GCF_000012685.1-RS_2024_08_06 2024-08-06 7388 7234 82 17015832 GCF_000012705.1 PRJNA224116 SAMN02604011 na na 205921 1311 Streptococcus agalactiae A909 strain=A909 na latest Complete Genome Major Full 2005-09-29 ASM1270v1 TIGR GCA_000012705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/705/GCF_000012705.1_ASM1270v1/ na na na haploid bacteria 2127839 2127839 35.500000 1 1 1 NCBI RefSeq GCF_000012705.1-RS_2025_03_27 2025-03-27 2177 2003 104 16172379 GCF_000012725.1 PRJNA224116 SAMN02598308 na reference genome 323098 913 Nitrobacter winogradskyi Nb-255 strain=Nb-255 na latest Complete Genome Major Full 2005-09-12 ASM1272v1 DOE Joint Genome Institute GCA_000012725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/725/GCF_000012725.1_ASM1272v1/ na assembly from type material na haploid bacteria 3402093 3402093 62.000000 1 1 1 NCBI RefSeq GCF_000012725.1-RS_2025_05_26 2025-05-26 3202 3050 56 16517654 GCF_000012745.1 PRJNA224116 SAMN02598291 na na 292415 36861 Thiobacillus denitrificans ATCC 25259 strain=ATCC 25259 na latest Complete Genome Major Full 2005-09-01 ASM1274v1 DOE Joint Genome Institute GCA_000012745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/745/GCF_000012745.1_ASM1274v1/ na na na haploid bacteria 2909809 2909809 66.000000 1 1 1 NCBI RefSeq GCF_000012745.1-RS_2025_04_26 2025-04-26 2895 2829 54 16452431 GCF_000012765.1 PRJNA224116 SAMN02603434 na reference genome 340047 2095 Mycoplasma capricolum subsp. capricolum ATCC 27343 strain=ATCC 27343 na latest Complete Genome Major Full 2005-12-06 ASM1276v1 J. Craig Venter Institute GCA_000012765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/765/GCF_000012765.1_ASM1276v1/ na assembly from type material na haploid bacteria 1010023 1010023 24.000000 1 1 1 NCBI RefSeq GCF_000012765.1-RS_2024_12_13 2024-12-13 879 827 39 na GCF_000012785.1 PRJNA224116 SAMN02604036 na na 320372 28450 Burkholderia pseudomallei 1710b strain=1710b na latest Complete Genome Major Full 2005-09-30 ASM1278v1 TIGR GCA_000012785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/785/GCF_000012785.1_ASM1278v1/ na na na haploid bacteria 7308054 7308054 68.000000 2 2 2 NCBI RefSeq GCF_000012785.1-RS_2025_02_14 2025-02-14 6512 6300 76 na GCF_000012805.1 PRJNA224116 SAMN02598329 na reference genome 323261 1229 Nitrosococcus oceani ATCC 19707 strain=ATCC 19707; JCM30415 (Type strain) na latest Complete Genome Major Full 2005-10-04 ASM1280v1 DOE Joint Genome Institute GCA_000012805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/805/GCF_000012805.1_ASM1280v1/ na assembly from type material na haploid bacteria 3522111 3522111 50.500000 2 2 2 NCBI RefSeq GCF_000012805.1-RS_2025_04_26 2025-04-26 3363 3255 55 na GCF_000012825.1 PRJNA224116 SAMN02604309 na reference genome 435590 821 Phocaeicola vulgatus ATCC 8482 strain=ATCC 8482 na latest Complete Genome Major Full 2007-06-27 ASM1282v1 Washington University (WashU) GCA_000012825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/825/GCF_000012825.1_ASM1282v1/ na assembly from type material na haploid bacteria 5163189 5163189 42.000000 1 1 1 NCBI RefSeq GCF_000012825.1-RS_2025_03_28 2025-03-28 4205 3982 108 17579514 GCF_000012845.1 PRJNA224116 SAMN02604310 na na 435591 823 Parabacteroides distasonis ATCC 8503 strain=ATCC 8503 na latest Complete Genome Major Full 2007-06-27 ASM1284v1 Washington University (WashU) GCA_000012845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/845/GCF_000012845.1_ASM1284v1/ na assembly from type material na haploid bacteria 4811379 4811379 45.000000 1 1 1 NCBI RefSeq GCF_000012845.1-RS_2025_04_12 2025-04-12 4027 3869 105 17579514 GCF_000012865.1 PRJNA224116 SAMN02603998 na reference genome 246194 129958 Carboxydothermus hydrogenoformans Z-2901 strain=Z-2901 na latest Complete Genome Major Full 2005-10-21 ASM1286v1 TIGR GCA_000012865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/865/GCF_000012865.1_ASM1286v1/ na assembly from type material na haploid bacteria 2401520 2401520 42.000000 1 1 1 NCBI RefSeq GCF_000012865.1-RS_2025_03_28 2025-03-28 2537 2448 66 16311624 GCF_000012885.1 PRJNA224116 SAMN02598295 na reference genome 338963 19 Syntrophotalea carbinolica DSM 2380 strain=DSM 2380 na latest Complete Genome Major Full 2006-03-30 ASM1288v1 DOE Joint Genome Institute GCA_000012885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/885/GCF_000012885.1_ASM1288v1/ na assembly from type material na haploid bacteria 3665893 3665893 55.000000 1 1 1 NCBI RefSeq GCF_000012885.1-RS_2025_05_01 2025-05-01 3262 3174 64 23227809 GCF_000012905.2 PRJNA224116 SAMN02598537 na na 272943 1063 Cereibacter sphaeroides 2.4.1 strain=2.4.1 na latest Chromosome Major Full 2013-10-23 ASM1290v2 DOE Joint Genome Institute GCA_000012905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/905/GCF_000012905.2_ASM1290v2/ na assembly from type material na haploid bacteria 4602977 4602877 69.000000 7 7 9 NCBI RefSeq GCF_000012905.2-RS_2025_12_02 2025-12-02 4471 4323 65 23209255 GCF_000012925.1 PRJNA224116 SAMN02598399 na reference genome 269799 28232 Geobacter metallireducens GS-15 strain=GS-15 na latest Complete Genome Major Full 2005-10-27 ASM1292v1 DOE Joint Genome Institute GCA_000012925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/925/GCF_000012925.1_ASM1292v1/ na assembly from type material na haploid bacteria 4011182 4011182 59.500000 2 2 2 NCBI RefSeq GCF_000012925.1-RS_2025_03_27 2025-03-27 3683 3587 60 19473543 GCF_000012945.1 PRJNA224116 SAMN02598262 na reference genome 482957 482957 Burkholderia lata strain=383 na latest Complete Genome Major Full 2005-10-20 ASM1294v1 DOE Joint Genome Institute GCA_000012945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/945/GCF_000012945.1_ASM1294v1/ na assembly from type material na haploid bacteria 8676277 8676277 66.500000 3 3 3 NCBI RefSeq GCF_000012945.1-RS_2025_04_22 2025-04-22 7876 7715 91 na GCF_000012965.1 PRJNA224116 SAMN02598289 na reference genome 326298 39766 Sulfurimonas denitrificans DSM 1251 strain=DSM 1251 na latest Complete Genome Major Full 2005-11-01 ASM1296v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000012965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/965/GCF_000012965.1_ASM1296v1/ na assembly from type material na haploid bacteria 2201561 2201561 34.500000 1 1 1 NCBI RefSeq GCF_000012965.1-RS_2025_05_27 2025-05-27 2220 2154 60 18065616 GCF_000012985.1 PRJNA224116 SAMN02603483 na reference genome 349521 158327 Hahella chejuensis KCTC 2396 strain=KCTC 2396 na latest Complete Genome Major Full 2005-12-14 ASM1298v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000012985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/012/985/GCF_000012985.1_ASM1298v1/ na assembly from type material na haploid bacteria 7215267 7215267 54.000000 1 1 1 NCBI RefSeq GCF_000012985.1-RS_2025_03_27 2025-03-27 6431 6307 86 16352867 GCF_000013005.1 PRJNA224116 SAMN00622970 na na 314225 39960 Erythrobacter litoralis HTCC2594 strain=HTCC2594 na latest Complete Genome Major Full 2006-01-11 ASM1300v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000013005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/005/GCF_000013005.1_ASM1300v1/ na na na haploid bacteria 3052398 3052398 63.000000 1 1 1 NCBI RefSeq GCF_000013005.1-RS_2025_03_09 2025-03-09 3011 2950 50 na GCF_000013025.1 PRJNA224116 SAMN02604041 na reference genome 228405 81032 Hyphomonas neptunium ATCC 15444 strain=ATCC 15444 na latest Complete Genome Major Full 2006-09-18 ASM1302v1 TIGR GCA_000013025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/025/GCF_000013025.1_ASM1302v1/ na assembly from type material na haploid bacteria 3705021 3705021 62.000000 1 1 1 NCBI RefSeq GCF_000013025.1-RS_2024_12_09 2024-12-09 3565 3497 49 16980487 GCF_000013045.1 PRJNA224116 SAMN02604045 na na 309807 146919 Salinibacter ruber DSM 13855 strain=DSM 13855; M31 na latest Complete Genome Major Full 2005-12-20 ASM1304v1 TIGR GCA_000013045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/045/GCF_000013045.1_ASM1304v1/ na assembly from type material na haploid bacteria 3587328 3587328 66.000000 2 2 2 NCBI RefSeq GCF_000013045.1-RS_2025_04_15 2025-04-15 3051 2969 50 16330755 GCF_000013085.1 PRJNA224116 SAMN02598538 na reference genome 269796 1085 Rhodospirillum rubrum ATCC 11170 strain=ATCC 11170 na latest Complete Genome Major Full 2005-12-12 ASM1308v1 DOE Joint Genome Institute GCA_000013085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/085/GCF_000013085.1_ASM1308v1/ na assembly from type material na haploid bacteria 4406557 4406557 65.500000 2 2 2 NCBI RefSeq GCF_000013085.1-RS_2025_03_28 2025-03-28 3979 3870 70 21886856 GCF_000013125.1 PRJNA224116 SAMN02604015 na na 212042 948 Anaplasma phagocytophilum str. HZ strain=HZ na latest Complete Genome Major Full 2006-02-21 ASM1312v1 TIGR GCA_000013125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/125/GCF_000013125.1_ASM1312v1/ na na na haploid bacteria 1471282 1471282 41.500000 1 1 1 NCBI RefSeq GCF_000013125.1-RS_2025_01_08 2025-01-08 1161 1017 44 16482227;21687416 GCF_000013145.1 PRJNA224116 SAMN02604010 na reference genome 205920 945 Ehrlichia chaffeensis str. Arkansas strain=Arkansas na latest Complete Genome Major Full 2006-02-21 ASM1314v1 TIGR GCA_000013145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/145/GCF_000013145.1_ASM1314v1/ na assembly from type material na haploid bacteria 1176248 1176248 30.000000 1 1 1 NCBI RefSeq GCF_000013145.1-RS_2025_01_08 2025-01-08 974 914 43 16482227 GCF_000013165.1 PRJNA224116 SAMN02604016 na reference genome 222891 951 Ehrlichia sennetsu str. Miyayama strain=Miyayama na latest Complete Genome Major Full 2006-02-21 ASM1316v1 TIGR GCA_000013165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/165/GCF_000013165.1_ASM1316v1/ na assembly from type material na haploid bacteria 859006 859006 41.000000 1 1 1 NCBI RefSeq GCF_000013165.1-RS_2025_01_08 2025-01-08 796 754 39 16482227 GCF_000013185.1 PRJNA224116 SAMN02604023 na na 374463 186490 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) strain=Hc (Homalodisca coagulata) na latest Complete Genome Major Full 2006-04-27 ASM1318v1 TIGR GCA_000013185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/185/GCF_000013185.1_ASM1318v1/ na na na haploid bacteria 686194 686194 33.000000 1 1 1 NCBI RefSeq GCF_000013185.1-RS_2025_03_17 2025-03-17 655 585 48 16729848 GCF_000013205.1 PRJNA224116 SAMN02604048 na na 321327 321327 Synechococcus sp. JA-3-3Ab strain=JA-3-3Ab na latest Complete Genome Major Full 2006-02-06 ASM1320v1 TIGR GCA_000013205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/205/GCF_000013205.1_ASM1320v1/ na na na haploid bacteria 2932766 2932766 60.000000 1 1 1 NCBI RefSeq GCF_000013205.1-RS_2024_08_13 2024-08-13 2835 2714 57 16391090;18059494 GCF_000013225.1 PRJNA224116 SAMN02604049 na na 321332 321332 Synechococcus sp. JA-2-3B'a(2-13) strain=JA-2-3B'a(2-13) na latest Complete Genome Major Full 2006-02-06 ASM1322v1 TIGR GCA_000013225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/225/GCF_000013225.1_ASM1322v1/ na na na haploid bacteria 3046682 3046682 58.500000 1 1 1 NCBI RefSeq GCF_000013225.1-RS_2024_08_13 2024-08-13 2832 2729 53 16391090;18059494 GCF_000013245.1 PRJNA224116 SAMN02604311 na na 357544 210 Helicobacter pylori HPAG1 strain=HPAG1 na latest Complete Genome Major Full 2006-06-06 ASM1324v1 Washington University (WashU) GCA_000013245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/245/GCF_000013245.1_ASM1324v1/ na na na haploid bacteria 1605736 1605736 39.000000 2 2 2 NCBI RefSeq GCF_000013245.1-RS_2025_04_15 2025-04-15 1541 1415 45 16788065 GCF_000013265.1 PRJNA224116 SAMN00000110 na na 364106 562 Escherichia coli UTI89 strain=UTI89 na latest Complete Genome Major Full 2006-04-05 ASM1326v1 Washington University (WashU) GCA_000013265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/265/GCF_000013265.1_ASM1326v1/ na assembly designated as clade exemplar na haploid bacteria 5179971 5179971 50.500000 2 2 2 NCBI RefSeq GCF_000013265.1-RS_2025_06_09 2025-06-09 5071 4756 117 16585510 GCF_000013285.1 PRJNA224116 SAMN02604008 na na 195103 1502 Clostridium perfringens ATCC 13124 strain=ATCC 13124 na latest Complete Genome Major Full 2006-07-25 ASM1328v1 TIGR GCA_000013285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/285/GCF_000013285.1_ASM1328v1/ na assembly from type material na haploid bacteria 3256683 3256683 28.500000 1 1 1 NCBI RefSeq GCF_000013285.1-RS_2024_10_16 2024-10-16 2978 2833 121 16825665 GCF_000013305.1 PRJNA224116 SAMN02604181 na na 362663 562 Escherichia coli 536 strain=536 na latest Complete Genome Major Full 2006-07-13 ASM1330v1 University of Goettingen GCA_000013305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/305/GCF_000013305.1_ASM1330v1/ na na na haploid bacteria 4938920 4938920 50.500000 1 1 1 NCBI RefSeq GCF_000013305.1-RS_2025_06_09 2025-06-09 4716 4356 108 16879640 GCF_000013325.1 PRJNA224116 SAMN02598432 na reference genome 279238 48935 Novosphingobium aromaticivorans DSM 12444 strain=DSM 12444 na latest Complete Genome Major Full 2006-02-10 ASM1332v1 US DOE Joint Genome Institute GCA_000013325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/325/GCF_000013325.1_ASM1332v1/ na assembly from type material na haploid bacteria 4233314 4233314 65.000000 3 3 3 NCBI RefSeq GCF_000013325.1-RS_2024_12_09 2024-12-09 4091 4006 68 na GCF_000013345.1 PRJNA224116 SAMN02199398 na reference genome 106370 106370 Frankia casuarinae strain=CcI3 na latest Complete Genome Major Full 2006-02-06 ASM1334v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000013345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/345/GCF_000013345.1_ASM1334v1/ na assembly from type material na haploid bacteria 5433628 5433628 70.000000 1 1 1 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2023-09-06 4755 4516 53 17151343 GCF_000013365.1 PRJNA224116 SAMN02598335 na na 316058 1076 Rhodopseudomonas palustris HaA2 strain=HaA2 na latest Complete Genome Major Full 2006-02-06 ASM1336v1 DOE Joint Genome Institute GCA_000013365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/365/GCF_000013365.1_ASM1336v1/ na na na haploid bacteria 5331656 5331656 66.000000 1 1 1 NCBI RefSeq GCF_000013365.1-RS_2025_06_21 2025-06-21 4833 4763 56 na GCF_000013385.1 PRJNA224116 SAMN02598274 na na 290397 161493 Anaeromyxobacter dehalogenans 2CP-C strain=2CP-C na latest Complete Genome Major Full 2006-01-27 ASM1338v1 DOE Joint Genome Institute GCA_000013385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/385/GCF_000013385.1_ASM1338v1/ na na na haploid bacteria 5013479 5013479 75.000000 1 1 1 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2024-02-15 4546 4461 59 na GCF_000013405.1 PRJNA224116 SAMN02603418 na reference genome 56780 316277 Syntrophus aciditrophicus SB strain=SB na latest Complete Genome Major Full 2006-01-26 ASM1340v1 Integrated Genomics GCA_000013405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/405/GCF_000013405.1_ASM1340v1/ na assembly from type material na haploid bacteria 3179300 3179300 51.500000 1 1 1 NCBI RefSeq GCF_000013405.1-RS_2024_07_03 2024-07-03 2954 2853 56 17442750 GCF_000013425.1 PRJNA57795 SAMN02604235 na reference genome 93061 1280 Staphylococcus aureus subsp. aureus NCTC 8325 strain=NCTC 8325 na latest Complete Genome Major Full 2006-02-13 ASM1342v1 University of Oklahoma Health Sciences Center GCA_000013425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/425/GCF_000013425.1_ASM1342v1/ na na na haploid bacteria 2821361 2821361 33.000000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2016-08-03 2872 2767 75 na GCF_000013445.1 PRJNA224116 SAMN02598287 na reference genome 323259 2203 Methanospirillum hungatei JF-1 strain=JF-1 na latest Complete Genome Major Full 2006-02-17 ASM1344v1 DOE Joint Genome Institute GCA_000013445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/445/GCF_000013445.1_ASM1344v1/ na assembly from type material na haploid archaea 3544738 3544738 45.000000 1 1 1 NCBI RefSeq GCF_000013445.1-RS_2024_10_21 2024-10-21 3453 3352 67 26744606 GCF_000013465.1 PRJNA224116 SAMN02604150 na na 451515 1280 Staphylococcus aureus subsp. aureus USA300_FPR3757 strain=FPR3757 na latest Complete Genome Major Full 2006-02-10 ASM1346v1 University of California, San Francisco GCA_000013465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/465/GCF_000013465.1_ASM1346v1/ na na na haploid bacteria 2917469 2917469 32.500000 4 4 4 NCBI RefSeq GCF_000013465.1-RS_2025_02_14 2025-02-14 2928 2774 72 16517273 GCF_000013485.1 PRJNA224116 SAMN02603501 na na 370551 1314 Streptococcus pyogenes MGAS9429 strain=MGAS9429 na latest Complete Genome Major Full 2006-05-04 ASM1348v1 Lab of Human Bacterial Pathogenesis GCA_000013485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/485/GCF_000013485.1_ASM1348v1/ na na na haploid bacteria 1836467 1836467 38.500000 1 1 1 NCBI RefSeq GCF_000013485.1-RS_2025_03_27 2025-03-27 1834 1677 89 16636287 GCF_000013565.1 PRJNA224116 SAMN02598279 na na 290400 290400 Jannaschia sp. CCS1 strain=CCS1 na latest Complete Genome Major Full 2006-02-27 ASM1356v1 US DOE Joint Genome Institute GCA_000013565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/565/GCF_000013565.1_ASM1356v1/ na na na haploid bacteria 4404049 4404049 62.000000 2 2 2 NCBI RefSeq GCF_000013565.1-RS_2024_08_22 2024-08-22 4386 4311 48 17526795 GCF_000013585.1 PRJNA224116 SAMN02603604 na na 373384 623 Shigella flexneri 5 str. 8401 strain=8401 na latest Complete Genome Major Full 2006-07-21 ASM1358v1 Microbial Genome Center of ChMPH GCA_000013585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/585/GCF_000013585.1_ASM1358v1/ na na na haploid bacteria 4574284 4574284 51.000000 1 1 1 NCBI RefSeq GCF_000013585.1-RS_2025_02_14 2025-02-14 4625 3878 126 16822325 GCF_000013605.1 PRJNA224116 SAMN02598320 na reference genome 338969 192843 Rhodoferax ferrireducens T118 strain=DSM 15236 na latest Complete Genome Major Full 2006-03-10 ASM1360v1 DOE Joint Genome Institute GCA_000013605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/605/GCF_000013605.1_ASM1360v1/ na assembly from type material na haploid bacteria 4969784 4969784 59.500000 2 2 2 NCBI RefSeq GCF_000013605.1-RS_2025_04_19 2025-04-19 4661 4554 54 na GCF_000013645.1 PRJNA224116 SAMN02598451 na reference genome 266265 36873 Paraburkholderia xenovorans LB400 strain=LB400 na latest Complete Genome Major Full 2006-04-10 ASM1364v1 DOE Joint Genome Institute GCA_000013645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/645/GCF_000013645.1_ASM1364v1/ na assembly from type material na haploid bacteria 9731138 9731138 62.500000 3 3 3 NCBI RefSeq GCF_000013645.1-RS_2024_12_09 2024-12-09 8858 8535 87 17030797 GCF_000013665.1 PRJNA224116 SAMN02598483 na reference genome 203122 86304 Saccharophagus degradans 2-40 strain=2-40 na latest Complete Genome Major Full 2006-03-17 ASM1366v1 DOE Joint Genome Institute GCA_000013665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/665/GCF_000013665.1_ASM1366v1/ na assembly from type material na haploid bacteria 5057531 5057531 46.000000 1 1 1 NCBI RefSeq GCF_000013665.1-RS_2025_03_02 2025-03-02 4141 4074 51 18516288 GCF_000013705.1 PRJNA224116 SAMN02598256 na reference genome 265072 405 Methylobacillus flagellatus KT strain=KT na latest Complete Genome Major Full 2006-04-10 ASM1370v1 DOE Joint Genome Institute GCA_000013705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/705/GCF_000013705.1_ASM1370v1/ na assembly from type material na haploid bacteria 2971517 2971517 55.500000 1 1 1 NCBI RefSeq GCF_000013705.1-RS_2024_12_09 2024-12-09 2875 2801 55 na GCF_000013725.1 PRJNA224116 SAMN02598545 na reference genome 259564 29291 Methanococcoides burtonii DSM 6242 strain=DSM 6242 na latest Complete Genome Major Full 2006-04-10 ASM1372v1 DOE Joint Genome Institute GCA_000013725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/725/GCF_000013725.1_ASM1372v1/ na assembly from type material na haploid archaea 2575032 2575032 41.000000 1 1 1 NCBI RefSeq GCF_000013725.1-RS_2024_10_21 2024-10-21 2641 2485 65 na GCF_000013745.1 PRJNA224116 SAMN02598337 na na 316056 1076 Rhodopseudomonas palustris BisB18 strain=BisB18 na latest Complete Genome Major Full 2006-03-21 ASM1374v1 DOE Joint Genome Institute GCA_000013745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/745/GCF_000013745.1_ASM1374v1/ na na na haploid bacteria 5513844 5513844 65.000000 1 1 1 NCBI RefSeq GCF_000013745.1-RS_2025_02_16 2025-02-16 5075 4955 63 na GCF_000013765.1 PRJNA224116 SAMN02598300 na reference genome 318161 192073 Shewanella denitrificans OS217 strain=OS217 na latest Complete Genome Major Full 2006-04-10 ASM1376v1 DOE Joint Genome Institute GCA_000013765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/765/GCF_000013765.1_ASM1376v1/ na assembly from type material na haploid bacteria 4545906 4545906 45.000000 1 1 1 NCBI RefSeq GCF_000013765.1-RS_2024_12_13 2024-12-13 3969 3793 121 na GCF_000013785.1 PRJNA224116 SAMN02603910 na na 379731 316 Stutzerimonas stutzeri A1501 strain=A1501 na latest Complete Genome Major Full 2007-04-20 ASM1378v1 The Biotechnology Research Institute,The Chinese Academy of Agricultural Sciences GCA_000013785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/785/GCF_000013785.1_ASM1378v1/ na na na haploid bacteria 4567418 4567418 64.000000 1 1 1 NCBI RefSeq GCF_000013785.1-RS_2025_02_02 2025-02-02 4270 4127 76 18495935 GCF_000013805.1 PRJNA224116 SAMN02598370 na na 377628 632 Yersinia pestis Nepal516 strain=Nepal516 na latest Complete Genome Major Full 2006-06-09 ASM1380v1 DOE Joint Genome Institute GCA_000013805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/805/GCF_000013805.1_ASM1380v1/ na na na haploid bacteria 4646286 4646286 47.500000 3 3 3 NCBI RefSeq GCF_000013805.1-RS_2025_03_27 2025-03-27 4219 3916 104 16740952 GCF_000013825.1 PRJNA224116 SAMN02598369 na na 360102 632 Yersinia pestis Antiqua strain=Antiqua na latest Complete Genome Major Full 2006-06-09 ASM1382v1 DOE Joint Genome Institute GCA_000013825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/825/GCF_000013825.1_ASM1382v1/ na na na haploid bacteria 4879836 4879836 47.500000 4 4 4 NCBI RefSeq GCF_000013825.1-RS_2025_03_27 2025-03-27 4470 4078 101 16740952 GCF_000013845.2 PRJNA224116 SAMN02604026 na na 289380 1502 Clostridium perfringens SM101 strain=SM101 na latest Complete Genome Major Full 2006-07-26 ASM1384v2 TIGR GCA_000013845.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/845/GCF_000013845.2_ASM1384v2/ na na na haploid bacteria 2921996 2921996 28.000000 3 3 3 NCBI RefSeq GCF_000013845.2-RS_2026_04_17 2026-04-17 2719 2510 128 16825665 GCF_000013865.1 PRJNA224116 SAMN02598293 na na 296591 296591 Polaromonas sp. JS666 strain=JS666 na latest Complete Genome Major Full 2006-04-10 ASM1386v1 DOE Joint Genome Institute GCA_000013865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/865/GCF_000013865.1_ASM1386v1/ na na na haploid bacteria 5898676 5898676 62.000000 3 3 3 NCBI RefSeq GCF_000013865.1-RS_2024_08_13 2024-08-13 5675 5526 51 na GCF_000013885.1 PRJNA224116 SAMN02598307 na reference genome 323097 912 Nitrobacter hamburgensis X14 strain=X14 na latest Complete Genome Major Full 2006-04-11 ASM1388v1 DOE Joint Genome Institute GCA_000013885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/885/GCF_000013885.1_ASM1388v1/ na assembly from type material na haploid bacteria 5011522 5011522 61.500000 4 4 4 NCBI RefSeq GCF_000013885.1-RS_2025_05_26 2025-05-26 4919 4503 59 na GCF_000013905.1 PRJNA224116 SAMN02598327 na reference genome 335284 330922 Psychrobacter cryohalolentis K5 strain=K5 na latest Complete Genome Major Full 2006-04-18 ASM1390v1 DOE Joint Genome Institute GCA_000013905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/905/GCF_000013905.1_ASM1390v1/ na assembly from type material na haploid bacteria 3101097 3101097 42.000000 2 2 2 NCBI RefSeq GCF_000013905.1-RS_2024_11_26 2024-11-26 2615 2524 64 na GCF_000013925.1 PRJNA224116 SAMN02603346 na na 362242 1809 Mycobacterium ulcerans Agy99 strain=Agy99 na latest Complete Genome Major Full 2006-12-01 ASM1392v2 Institut Pasteur GCA_000013925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/925/GCF_000013925.1_ASM1392v2/ na na na haploid bacteria 5805761 5805761 65.500000 2 2 2 NCBI RefSeq GCF_000013925.1-RS_2024_07_15 2024-07-15 5236 4240 51 14736915;17210928 GCF_000013945.1 PRJNA224116 SAMN02603615 na na 355276 174 Leptospira borgpetersenii serovar Hardjo-bovis str. L550 strain=L550 na latest Complete Genome Major Full 2006-10-13 ASM1394v1 Monash University GCA_000013945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/945/GCF_000013945.1_ASM1394v1/ na na na haploid bacteria 3931782 3931782 40.000000 2 2 2 NCBI RefSeq GCF_000013945.1-RS_2024_09_03 2024-09-03 3479 3001 44 16973745 GCF_000013965.1 PRJNA224116 SAMN02603616 na na 355277 174 Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 strain=JB197 na latest Complete Genome Major Full 2006-10-13 ASM1396v1 Monash University GCA_000013965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/965/GCF_000013965.1_ASM1396v1/ na na na haploid bacteria 3876235 3876235 40.000000 2 2 2 NCBI RefSeq GCF_000013965.1-RS_2024_09_03 2024-09-03 3416 2951 44 16973745 GCF_000013985.1 PRJNA224116 SAMN02598319 na reference genome 317655 117207 Sphingopyxis alaskensis RB2256 strain=RB2256 na latest Complete Genome Major Full 2006-05-18 ASM1398v1 DOE Joint Genome Institute GCA_000013985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/013/985/GCF_000013985.1_ASM1398v1/ na assembly from type material na haploid bacteria 3373713 3373713 65.500000 2 2 2 NCBI RefSeq GCF_000013985.1-RS_2024_12_09 2024-12-09 3320 3230 51 19805210 GCF_000014005.1 PRJNA224116 SAMN02598354 na reference genome 204669 658062 Candidatus Koribacter versatilis Ellin345 strain=Ellin345 na latest Complete Genome Major Full 2006-05-04 ASM1400v1 DOE Joint Genome Institute GCA_000014005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/005/GCF_000014005.1_ASM1400v1/ na na na haploid bacteria 5650368 5650368 58.500000 1 1 1 NCBI RefSeq GCF_000014005.1-RS_2024_12_13 2024-12-13 4994 4924 54 19201974 GCF_000014025.1 PRJNA224116 SAMN02604276 na reference genome 367737 28197 Aliarcobacter butzleri RM4018 strain=RM4018 na latest Complete Genome Major Full 2007-09-27 ASM1402v1 USDA - Agricultural Research Service, USA GCA_000014025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/025/GCF_000014025.1_ASM1402v1/ na assembly from type material na haploid bacteria 2341251 2341251 27.000000 1 1 1 NCBI RefSeq GCF_000014025.1-RS_2025_03_28 2025-03-28 2345 2263 71 17588128;18159241 GCF_000014045.1 PRJNA224116 SAMN02602987 na na 375451 2434 Roseobacter denitrificans OCh 114 strain=OCh 114 na latest Complete Genome Major Full 2006-06-22 ASM1404v1 Arizona State University/TGen GCA_000014045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/045/GCF_000014045.1_ASM1404v1/ na assembly from type material na haploid bacteria 4331234 4331234 59.000000 5 5 5 NCBI RefSeq GCF_000014045.1-RS_2024_07_24 2024-07-24 4081 3995 44 17098896 GCF_000014065.1 PRJNA224116 SAMN02598292 na na 292414 292414 Ruegeria sp. TM1040 strain=TM1040 na latest Complete Genome Major Full 2006-05-22 ASM1406v1 DOE Joint Genome Institute GCA_000014065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/065/GCF_000014065.1_ASM1406v1/ na na na haploid bacteria 4153699 4153699 60.000000 3 3 3 NCBI RefSeq GCF_000014065.1-RS_2024_08_22 2024-08-22 3946 3842 80 17526795 GCF_000014105.1 PRJNA224116 SAMN02603605 na na 374833 487 Neisseria meningitidis 053442 strain=53442 na latest Complete Genome Major Full 2007-12-03 ASM1410v1 Microbial Genome Center of ChMPH GCA_000014105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/105/GCF_000014105.1_ASM1410v1/ na na na haploid bacteria 2153416 2153416 51.500000 1 1 1 NCBI RefSeq GCF_000014105.1-RS_2024_12_10 2024-12-10 2158 1909 75 18031983 GCF_000014125.1 PRJNA224116 SAMN02603464 na reference genome 386415 1542 Clostridium novyi NT strain=NT na latest Complete Genome Major Full 2006-11-17 ASM1412v1 Johns Hopkins Kimmel Comprehensive Cancer Center GCA_000014125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/125/GCF_000014125.1_ASM1412v1/ na na na haploid bacteria 2547720 2547720 29.000000 1 1 1 NCBI RefSeq GCF_000014125.1-RS_2025_03_29 2025-03-29 2440 2298 116 17115055 GCF_000014145.1 PRJNA224116 SAMN02598536 na reference genome 269798 985 Cytophaga hutchinsonii ATCC 33406 strain=ATCC 33406 na latest Complete Genome Major Full 2006-07-11 ASM1414v1 DOE Joint Genome Institute GCA_000014145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/145/GCF_000014145.1_ASM1414v1/ na assembly from type material na haploid bacteria 4433218 4433218 39.000000 1 1 1 NCBI RefSeq GCF_000014145.1-RS_2024_10_22 2024-10-22 3754 3700 51 17400776 GCF_000014185.1 PRJNA224116 SAMN02598258 na na 266117 49319 Rubrobacter xylanophilus DSM 9941 strain=DSM 9941 na latest Complete Genome Major Full 2006-06-09 ASM1418v1 DOE Joint Genome Institute GCA_000014185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/185/GCF_000014185.1_ASM1418v1/ na na na haploid bacteria 3225748 3225748 70.500000 1 1 1 NCBI RefSeq GCF_000014185.1-RS_2024_12_13 2024-12-13 3325 3222 53 na GCF_000014205.1 PRJNA224116 SAMN02604299 na na 388919 1305 Streptococcus sanguinis SK36 strain=SK36 na latest Complete Genome Major Full 2007-02-09 ASM1420v1 Virginia Commonwealth University GCA_000014205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/205/GCF_000014205.1_ASM1420v1/ na na na haploid bacteria 2388435 2388435 43.500000 1 1 1 NCBI RefSeq GCF_000014205.1-RS_2025_03_27 2025-03-27 2349 2228 76 17277061 GCF_000014225.1 PRJNA224116 SAMN02598305 na na 3042615 3042615 Paraglaciecola sp. T6c strain=T6c na latest Complete Genome Major Full 2006-06-28 ASM1422v1 DOE Joint Genome Institute GCA_000014225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/225/GCF_000014225.1_ASM1422v1/ na na na haploid bacteria 5187005 5187005 44.500000 1 1 1 NCBI RefSeq GCF_000014225.1-RS_2024_07_23 2024-07-23 4452 4332 81 na GCF_000014265.1 PRJNA224116 SAMN02598485 na reference genome 203124 1206 Trichodesmium erythraeum IMS101 strain=IMS101 na latest Complete Genome Major Full 2006-07-06 ASM1426v1 DOE Joint Genome Institute GCA_000014265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/265/GCF_000014265.1_ASM1426v1/ na na na haploid bacteria 7750108 7750108 34.000000 1 1 1 NCBI RefSeq GCF_000014265.1-RS_2024_08_16 2024-08-16 5449 4989 47 25831533 GCF_000014285.2 PRJNA224116 SAMN02603769 na na 391165 364410 Granulibacter bethesdensis CGDNIH1 strain=CGDNIH1 na latest Complete Genome Major Full 2017-08-28 ASM1428v2 Rocky Mountain Laboratories, National Institutes of Allergy and Infectious Disease, The National Institutes of Health GCA_000014285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/285/GCF_000014285.2_ASM1428v2/ na assembly from type material na haploid bacteria 2708434 2708434 59.000000 1 1 1 NCBI RefSeq GCF_000014285.2-RS_2024_12_15 2024-12-15 2475 2396 65 17827295 GCF_000014345.1 PRJNA224116 SAMN02604083 na na 293613 788 Rickettsia canadensis str. McKiel strain=McKiel na latest Complete Genome Major Full 2007-10-01 ASM1434v1 Univ. Iowa GCA_000014345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/345/GCF_000014345.1_ASM1434v1/ na na na haploid bacteria 1159772 1159772 31.000000 1 1 1 NCBI RefSeq GCF_000014345.1-RS_2026_01_08 2026-01-08 1092 942 40 na GCF_000014365.2 PRJNA224116 SAMN02604051 na na 373153 1313 Streptococcus pneumoniae D39 strain=D39 na latest Complete Genome Minor Full 2018-05-02 ASM1436v2 TIGR GCA_000014365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/365/GCF_000014365.2_ASM1436v2/ na na na haploid bacteria 2046116 2046116 39.500000 1 1 1 NCBI RefSeq GCF_000014365.2-RS_2026_03_21 2026-03-21 2099 1862 73 17041037 GCF_000014385.1 PRJNA224116 SAMN02598484 na na 203123 1247 Oenococcus oeni PSU-1 strain=PSU-1 na latest Complete Genome Major Full 2006-10-13 ASM1438v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/385/GCF_000014385.1_ASM1438v1/ na na na haploid bacteria 1780517 1780517 38.000000 1 1 1 NCBI RefSeq GCF_000014385.1-RS_2026_04_18 2026-04-18 1852 1720 55 17030793 GCF_000014405.1 PRJNA224116 SAMN02598530 na na 321956 1584 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 strain=ATCC BAA-365 na latest Complete Genome Major Full 2006-10-13 ASM1440v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/405/GCF_000014405.1_ASM1440v1/ na na na haploid bacteria 1856951 1856951 49.500000 1 1 1 NCBI RefSeq GCF_000014405.1-RS_2026_03_27 2026-03-27 2009 1683 128 17030793 GCF_000014425.1 PRJNA224116 SAMN02598542 na reference genome 324831 1596 Lactobacillus gasseri ATCC 33323 = JCM 1131 strain=ATCC 33323 na latest Complete Genome Major Full 2006-10-13 ASM1442v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/425/GCF_000014425.1_ASM1442v1/ na assembly from type material na haploid bacteria 1894360 1894360 35.500000 1 1 1 NCBI RefSeq GCF_000014425.1-RS_2026_03_27 2026-03-27 1884 1741 96 17030793 GCF_000014445.1 PRJNA224116 SAMN02598482 na reference genome 203120 1245 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 strain=ATCC 8293 na latest Complete Genome Major Full 2006-10-13 ASM1444v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/445/GCF_000014445.1_ASM1444v1/ na assembly from type material na haploid bacteria 2075763 2075763 37.500000 2 2 2 NCBI RefSeq GCF_000014445.1-RS_2026_04_14 2026-04-14 2103 1996 85 17030793 GCF_000014465.1 PRJNA224116 SAMN02598532 na na 387344 1580 Levilactobacillus brevis ATCC 367 strain=ATCC 367 na latest Complete Genome Major Full 2006-10-13 ASM1446v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/465/GCF_000014465.1_ASM1446v1/ na na na haploid bacteria 2340228 2340228 46.000000 3 3 3 NCBI RefSeq GCF_000014465.1-RS_2025_09_10 2025-09-10 2339 2216 82 17030793 GCF_000014485.1 PRJNA224116 SAMN02598313 na na 322159 1308 Streptococcus thermophilus LMD-9 strain=LMD-9 na latest Complete Genome Major Full 2006-10-13 ASM1448v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/485/GCF_000014485.1_ASM1448v1/ na na na haploid bacteria 1864178 1864178 39.000000 3 3 3 NCBI RefSeq GCF_000014485.1-RS_2026_03_27 2026-03-27 1939 1599 89 17030793 GCF_000014505.1 PRJNA224116 SAMN02598525 na reference genome 278197 1255 Pediococcus pentosaceus ATCC 25745 strain=ATCC 25745 na latest Complete Genome Major Full 2006-10-13 ASM1450v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/505/GCF_000014505.1_ASM1450v1/ na na na haploid bacteria 1832387 1832387 37.500000 1 1 1 NCBI RefSeq GCF_000014505.1-RS_2025_11_20 2025-11-20 1818 1732 73 17030793 GCF_000014525.1 PRJNA224116 SAMN02598528 na na 321967 1597 Lacticaseibacillus paracasei ATCC 334 strain=ATCC 334 na latest Complete Genome Major Full 2006-10-13 ASM1452v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/525/GCF_000014525.1_ASM1452v1/ na na na haploid bacteria 2924325 2924325 46.500000 2 2 2 NCBI RefSeq GCF_000014525.1-RS_2026_01_06 2026-01-06 2859 2626 77 17030793 GCF_000014545.1 PRJNA224116 SAMN02598527 na na 272622 1359 Lactococcus cremoris subsp. cremoris SK11 strain=SK11 na latest Complete Genome Major Full 2006-10-13 ASM1454v1 US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. GCA_000014545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/545/GCF_000014545.1_ASM1454v1/ na na na haploid bacteria 2598348 2598348 36.000000 6 6 6 NCBI RefSeq GCF_000014545.1-RS_2025_09_17 2025-09-17 2694 2444 84 17030793 GCF_000014565.1 PRJNA224116 SAMN02604146 na na 101510 132919 Rhodococcus jostii RHA1 strain=RHA1 na latest Complete Genome Major Full 2006-07-28 ASM1456v1 University of British Columbia GCA_000014565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/565/GCF_000014565.1_ASM1456v1/ na na na haploid bacteria 9702737 9702737 67.000000 4 4 4 NCBI RefSeq GCF_000014565.1-RS_2025_04_15 2025-04-15 9070 8646 67 20622058 GCF_000014585.1 PRJNA224116 SAMN02604031 na na 64471 64471 Synechococcus sp. CC9311 strain=CC9311 na latest Complete Genome Major Full 2006-09-01 ASM1458v1 TIGR GCA_000014585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/585/GCF_000014585.1_ASM1458v1/ na na na haploid bacteria 2606748 2606748 52.500000 1 1 1 NCBI RefSeq GCF_000014585.1-RS_2024_08_13 2024-08-13 2771 2699 53 16938853 GCF_000014605.1 PRJNA224116 SAMN02641482 na na 393011 263 Francisella tularensis subsp. holarctica OSU18 strain=OSU18 na latest Complete Genome Major Full 2006-09-20 ASM1460v1 Baylor College of Medicine GCA_000014605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/605/GCF_000014605.1_ASM1460v1/ na na na haploid bacteria 1895727 1895727 32.000000 1 1 1 NCBI RefSeq GCF_000014605.1-RS_2026_06_17 2026-06-17 1977 1615 52 16980500 GCF_000014625.1 PRJNA224116 SAMN02603591 na na 208963 287 Pseudomonas aeruginosa UCBPP-PA14 strain=UCBPP-PA14 na latest Complete Genome Major Full 2006-10-06 ASM1462v1 Massachusetts General Hospital GCA_000014625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/625/GCF_000014625.1_ASM1462v1/ na na na haploid bacteria 6537648 6537648 66.500000 1 1 1 NCBI RefSeq GCF_000014625.1-RS_2025_02_23 2025-02-23 6041 5891 80 17038190 GCF_000014645.1 PRJNA224116 SAMN02604254 na na 401614 263 Francisella tularensis subsp. novicida U112 strain=U112 na latest Complete Genome Major Full 2006-11-28 ASM1464v1 University of Washington GCA_000014645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/645/GCF_000014645.1_ASM1464v1/ na assembly from type material na haploid bacteria 1910031 1910031 32.500000 1 1 1 NCBI RefSeq GCF_000014645.1-RS_2026_01_30 2026-01-30 1843 1766 52 na GCF_000014685.1 PRJNA224116 SAMN02598317 na na 60480 60480 Shewanella sp. MR-4 strain=MR-4 na latest Complete Genome Major Full 2006-09-01 ASM1468v1 DOE Joint Genome Institute GCA_000014685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/685/GCF_000014685.1_ASM1468v1/ na na na haploid bacteria 4706287 4706287 48.000000 1 1 1 NCBI RefSeq GCF_000014685.1-RS_2025_01_31 2025-01-31 4096 3936 135 21642407 GCF_000014705.1 PRJNA224116 SAMN02598301 na reference genome 318167 56812 Shewanella frigidimarina NCIMB 400 strain=NCIMB 400 na latest Complete Genome Major Full 2006-09-14 ASM1470v1 DOE Joint Genome Institute GCA_000014705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/705/GCF_000014705.1_ASM1470v1/ na na na haploid bacteria 4845257 4845257 41.500000 1 1 1 NCBI RefSeq GCF_000014705.1-RS_2026_04_23 2026-04-23 4183 4015 129 na GCF_000014725.1 PRJNA224116 SAMN02598286 na reference genome 335541 863 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 strain=Goettingen na latest Complete Genome Major Full 2006-09-14 ASM1472v1 DOE Joint Genome Institute GCA_000014725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/725/GCF_000014725.1_ASM1472v1/ na assembly from type material na haploid bacteria 2936195 2936195 45.000000 1 1 1 NCBI RefSeq GCF_000014725.1-RS_2026_04_14 2026-04-14 2725 2619 70 na GCF_000014745.1 PRJNA224116 SAMN02598382 na na 394221 74318 Maricaulis maris MCS10 strain=MCS10 na latest Complete Genome Major Full 2006-09-14 ASM1474v1 DOE Joint Genome Institute GCA_000014745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/745/GCF_000014745.1_ASM1474v1/ na na na haploid bacteria 3368780 3368780 62.500000 1 1 1 NCBI RefSeq GCF_000014745.1-RS_2025_03_09 2025-03-09 3183 3106 55 na GCF_000014765.1 PRJNA224116 SAMN02598323 na reference genome 335283 916 Nitrosomonas eutropha C91 strain=C91 na latest Complete Genome Major Full 2006-09-13 ASM1476v1 DOE Joint Genome Institute GCA_000014765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/765/GCF_000014765.1_ASM1476v1/ na na na haploid bacteria 2781824 2781824 48.500000 3 3 3 NCBI RefSeq GCF_000014765.1-RS_2026_04_14 2026-04-14 2746 2583 48 17991028 GCF_000014785.1 PRJNA224116 SAMN02598349 na reference genome 187272 351052 Alkalilimnicola ehrlichii MLHE-1 strain=MLHE-1 na latest Complete Genome Major Full 2006-09-12 ASM1478v1 DOE Joint Genome Institute GCA_000014785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/785/GCF_000014785.1_ASM1478v1/ na assembly from type material na haploid bacteria 3275944 3275944 67.500000 1 1 1 NCBI RefSeq GCF_000014785.1-RS_2025_12_13 2025-12-13 2964 2888 58 na GCF_000014805.1 PRJNA224116 SAMN02604052 na reference genome 380703 644 Aeromonas hydrophila subsp. hydrophila ATCC 7966 strain=ATCC 7966 na latest Complete Genome Major Full 2006-11-06 ASM1480v1 TIGR GCA_000014805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/805/GCF_000014805.1_ASM1480v1/ na assembly from type material na haploid bacteria 4744448 4744448 61.500000 1 1 1 NCBI RefSeq GCF_000014805.1-RS_2025_12_11 2025-12-11 4357 4167 162 16980456 GCF_000014845.1 PRJNA224116 SAMN02603424 na na 405955 562 Escherichia coli APEC O1 strain=APEC O1 na latest Complete Genome Major Full 2006-10-04 ASM1484v1 Iowa State University GCA_000014845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/845/GCF_000014845.1_ASM1484v1/ na na na haploid bacteria 5497653 5497653 50.500000 3 3 3 NCBI RefSeq GCF_000014845.1-RS_2025_07_24 2025-07-24 5470 5104 123 16885466;16940062;17293413 GCF_000014865.1 PRJNA224116 SAMN02598452 na reference genome 156889 1124597 Magnetococcus marinus MC-1 strain=MC-1 na latest Complete Genome Major Full 2006-11-08 ASM1486v1 US DOE Joint Genome Institute GCA_000014865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/865/GCF_000014865.1_ASM1486v1/ na assembly from type material na haploid bacteria 4719581 4719581 54.000000 1 1 1 NCBI RefSeq GCF_000014865.1-RS_2026_04_06 2026-04-06 3860 3732 61 22581902 GCF_000014885.1 PRJNA224116 SAMN02603456 na reference genome 225849 404011 Shewanella piezotolerans WP3 strain=WP3 na latest Complete Genome Major Full 2008-11-13 ASM1488v1 James D. Watson Institute of Genome Sciences GCA_000014885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/885/GCF_000014885.1_ASM1488v1/ na assembly from type material na haploid bacteria 5396476 5396476 43.500000 1 1 1 NCBI RefSeq GCF_000014885.1-RS_2026_03_30 2026-03-30 4631 4443 115 18398463 GCF_000014925.1 PRJNA224116 SAMN02604022 na na 290340 43663 Paenarthrobacter aurescens TC1 strain=TC1; ATCC BAA-1386 na latest Complete Genome Major Full 2006-12-26 ASM1492v1 TIGR GCA_000014925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/925/GCF_000014925.1_ASM1492v1/ na na na haploid bacteria 5226648 5226648 62.500000 3 3 3 NCBI RefSeq GCF_000014925.1-RS_2025_05_23 2025-05-23 4851 4706 78 17194220 GCF_000014945.1 PRJNA224116 SAMN02598350 na reference genome 349307 2224 Methanothrix thermoacetophila PT strain=PT na latest Complete Genome Major Full 2006-10-25 ASM1494v1 US DOE Joint Genome Institute GCA_000014945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/945/GCF_000014945.1_ASM1494v1/ na assembly from heterotypic synonym type material na haploid archaea 1879471 1879471 53.500000 1 1 1 NCBI RefSeq GCF_000014945.1-RS_2025_11_21 2025-11-21 1828 1762 56 na GCF_000014965.1 PRJNA224116 SAMN02598285 na reference genome 335543 119484 Syntrophobacter fumaroxidans MPOB strain=MPOB na latest Complete Genome Major Full 2006-10-26 ASM1496v1 US DOE Joint Genome Institute GCA_000014965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/965/GCF_000014965.1_ASM1496v1/ na assembly from type material na haploid bacteria 4990251 4990251 60.000000 1 1 1 NCBI RefSeq GCF_000014965.1-RS_2026_07_03 2026-07-03 4053 3958 60 na GCF_000014985.1 PRJNA224116 SAMN02603981 na na 243243 1764 Mycobacterium avium 104 strain=104 na latest Complete Genome Major Full 2006-11-20 ASM1498v1 TIGR GCA_000014985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/014/985/GCF_000014985.1_ASM1498v1/ na na na haploid bacteria 5475491 5475491 69.000000 1 1 1 NCBI RefSeq GCF_000014985.1-RS_2026_02_14 2026-02-14 5222 4917 52 na GCF_000015005.1 PRJNA224116 SAMN02603982 na na 246196 1772 Mycolicibacterium smegmatis MC2 155 strain=MC2 155 na latest Complete Genome Major Full 2006-11-20 ASM1500v1 TIGR GCA_000015005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/005/GCF_000015005.1_ASM1500v1/ na na na haploid bacteria 6988209 6988209 67.500000 1 1 1 NCBI RefSeq GCF_000015005.1-RS_2026_04_23 2026-04-23 6735 6518 56 na GCF_000015025.1 PRJNA224116 SAMN02598358 na reference genome 351607 28049 Acidothermus cellulolyticus 11B strain=11B; ATCC 43068 na latest Complete Genome Major Full 2006-11-09 ASM1502v1 DOE Joint Genome Institute GCA_000015025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/025/GCF_000015025.1_ASM1502v1/ na assembly from type material na haploid bacteria 2443540 2443540 67.000000 1 1 1 NCBI RefSeq GCF_000015025.1-RS_2026_03_27 2026-03-27 2217 2144 51 19270083 GCF_000015045.1 PRJNA224116 SAMN02598297 na reference genome 338966 29543 Pelobacter propionicus DSM 2379 strain=DSM 2379 na latest Complete Genome Major Full 2006-11-30 ASM1504v1 US DOE Joint Genome Institute GCA_000015045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/045/GCF_000015045.1_ASM1504v1/ na assembly from type material na haploid bacteria 4241119 4241119 58.500000 3 3 3 NCBI RefSeq GCF_000015045.1-RS_2025_12_13 2025-12-13 3940 3827 69 na GCF_000015065.1 PRJNA224116 SAMN02598406 na na 412694 1428 Bacillus thuringiensis str. Al Hakam strain=Al Hakam na latest Complete Genome Major Full 2006-11-27 ASM1506v1 DOE Joint Genome Institute GCA_000015065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/065/GCF_000015065.1_ASM1506v1/ na na na haploid bacteria 5313030 5313030 35.500000 2 2 2 NCBI RefSeq GCF_000015065.1-RS_2025_04_26 2025-04-26 5532 5216 151 17337577 GCF_000015085.1 PRJNA224116 SAMN02604050 na na 360106 196 Campylobacter fetus subsp. fetus 82-40 strain=82-40 na latest Complete Genome Major Full 2006-11-27 ASM1508v1 TIGR GCA_000015085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/085/GCF_000015085.1_ASM1508v1/ na na na haploid bacteria 1773615 1773615 33.500000 1 1 1 NCBI RefSeq GCF_000015085.1-RS_2026_01_30 2026-01-30 1811 1721 56 na GCF_000015105.1 PRJNA224116 SAMN02598375 na reference genome 413404 386487 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) strain=Cm na latest Complete Genome Major Full 2006-12-01 ASM1510v1 DOE Joint Genome Institute GCA_000015105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/105/GCF_000015105.1_ASM1510v1/ na na na haploid bacteria 1160782 1160782 34.000000 1 1 1 NCBI RefSeq GCF_000015105.1-RS_2026_04_14 2026-04-14 1148 1090 42 17303757 GCF_000015125.1 PRJNA224116 SAMN02598273 na reference genome 290317 1096 Chlorobium phaeobacteroides DSM 266 strain=DSM 266 na latest Complete Genome Major Full 2006-12-11 ASM1512v1 US DOE Joint Genome Institute GCA_000015125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/125/GCF_000015125.1_ASM1512v1/ na assembly from type material na haploid bacteria 3133902 3133902 48.500000 1 1 1 NCBI RefSeq GCF_000015125.1-RS_2025_12_11 2025-12-11 2839 2709 56 na GCF_000015145.1 PRJNA224116 SAMN02604082 na reference genome 415426 54248 Hyperthermus butylicus DSM 5456 strain=DSM 5456 na latest Complete Genome Major Full 2007-01-22 ASM1514v1 Univ. Copenhagen GCA_000015145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/145/GCF_000015145.1_ASM1514v1/ na assembly from type material na haploid archaea 1667163 1667163 53.500000 1 1 1 NCBI RefSeq GCF_000015145.1-RS_2026_03_30 2026-03-30 1829 1745 51 17350933 GCF_000015165.1 PRJNA224116 SAMN02598359 na na 288000 288000 Bradyrhizobium sp. BTAi1 strain=BTAi1 na latest Complete Genome Major Full 2007-05-11 ASM1516v1 US DOE Joint Genome Institute GCA_000015165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/165/GCF_000015165.1_ASM1516v1/ na na na haploid bacteria 8493513 8493513 65.000000 2 2 2 NCBI RefSeq GCF_000015165.1-RS_2024_08_22 2024-08-22 7709 7556 62 17540897 GCF_000015185.1 PRJNA224116 SAMN02598315 na na 351745 351745 Shewanella sp. W3-18-1 strain=W3-18-1 na latest Complete Genome Major Full 2007-01-03 ASM1518v1 DOE Joint Genome Institute GCA_000015185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/185/GCF_000015185.1_ASM1518v1/ na na na haploid bacteria 4708380 4708380 44.500000 1 1 1 NCBI RefSeq GCF_000015185.1-RS_2025_01_31 2025-01-31 4244 4058 130 21642407 GCF_000015205.1 PRJNA224116 SAMN02598374 na reference genome 384616 2277 Pyrobaculum islandicum DSM 4184 strain=DSM 4184 na latest Complete Genome Major Full 2006-12-20 ASM1520v1 DOE Joint Genome Institute GCA_000015205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/205/GCF_000015205.1_ASM1520v1/ na assembly from type material na haploid archaea 1826402 1826402 49.500000 1 1 1 NCBI RefSeq GCF_000015205.1-RS_2026_04_29 2026-04-29 2202 2088 49 na GCF_000015225.1 PRJNA224116 SAMN02598366 na reference genome 368408 2269 Thermofilum pendens Hrk 5 strain=Hrk 5 na latest Complete Genome Major Full 2006-12-18 ASM1522v1 DOE Joint Genome Institute GCA_000015225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/225/GCF_000015225.1_ASM1522v1/ na assembly from type material na haploid archaea 1813393 1813393 57.500000 2 2 2 NCBI RefSeq GCF_000015225.1-RS_2026_05_01 2026-05-01 1982 1920 49 na GCF_000015245.1 PRJNA224116 SAMN02598298 na reference genome 326297 60478 Shewanella amazonensis SB2B strain=SB2B na latest Complete Genome Major Full 2006-12-21 ASM1524v1 DOE Joint Genome Institute GCA_000015245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/245/GCF_000015245.1_ASM1524v1/ na assembly from type material na haploid bacteria 4306142 4306142 53.500000 1 1 1 NCBI RefSeq GCF_000015245.1-RS_2025_12_13 2025-12-13 3813 3669 130 na GCF_000015265.1 PRJNA224116 SAMN02598280 na na 196162 196162 Nocardioides sp. JS614 strain=JS614 na latest Complete Genome Major Full 2006-12-18 ASM1526v1 DOE Joint Genome Institute GCA_000015265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/265/GCF_000015265.1_ASM1526v1/ na na na haploid bacteria 5293685 5293685 71.500000 2 2 2 NCBI RefSeq GCF_000015265.1-RS_2025_08_27 2025-08-27 5151 5054 54 21551312 GCF_000015285.1 PRJNA224116 SAMN02598361 na reference genome 357804 357794 Psychromonas ingrahamii 37 strain=37 na latest Complete Genome Major Full 2006-12-22 ASM1528v1 DOE Joint Genome Institute GCA_000015285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/285/GCF_000015285.1_ASM1528v1/ na assembly from type material na haploid bacteria 4559598 4559598 40.000000 1 1 1 NCBI RefSeq GCF_000015285.1-RS_2025_12_13 2025-12-13 3957 3742 120 na GCF_000015305.1 PRJNA224116 SAMN02598347 na reference genome 350058 39687 Mycolicibacterium vanbaalenii PYR-1 strain=PYR-1 na latest Complete Genome Major Full 2006-12-27 ASM1530v1 DOE Joint Genome Institute GCA_000015305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/305/GCF_000015305.1_ASM1530v1/ na assembly from heterotypic synonym type material na haploid bacteria 6491865 6491865 68.000000 1 1 1 NCBI RefSeq GCF_000015305.1-RS_2025_12_09 2025-12-09 6236 6065 57 na GCF_000015325.1 PRJNA224116 SAMN02598334 na na 397945 80869 Paracidovorax citrulli AAC00-1 strain=AAC00-1 na latest Complete Genome Major Full 2007-01-04 ASM1532v1 DOE Joint Genome Institute GCA_000015325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/325/GCF_000015325.1_ASM1532v1/ na na na haploid bacteria 5352772 5352772 68.500000 1 1 1 NCBI RefSeq GCF_000015325.1-RS_2026_07_01 2026-07-01 4998 4840 65 na GCF_000015345.1 PRJNA224116 SAMN02603972 na reference genome 246195 870 Dichelobacter nodosus VCS1703A strain=VCS1703A na latest Complete Genome Major Full 2007-05-04 ASM1534v1 TIGR GCA_000015345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/345/GCF_000015345.1_ASM1534v1/ na na na haploid bacteria 1389350 1389350 44.500000 1 1 1 NCBI RefSeq GCF_000015345.1-RS_2025_12_10 2025-12-10 1351 1286 58 17468768 GCF_000015365.1 PRJNA224116 SAMN02598294 na na 351348 2743 Marinobacter nauticus VT8 strain=VT8 na latest Complete Genome Major Full 2006-12-28 ASM1536v1 DOE Joint Genome Institute GCA_000015365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/365/GCF_000015365.1_ASM1536v1/ na assembly from heterotypic synonym type material na haploid bacteria 4779762 4779762 57.000000 3 3 3 NCBI RefSeq GCF_000015365.1-RS_2026_01_27 2026-01-27 4455 4335 64 na GCF_000015385.1 PRJNA224116 SAMN02603893 na na 405566 1587 Lactobacillus helveticus DPC 4571 strain=DPC 4571 na latest Complete Genome Major Full 2007-11-15 ASM1538v1 Teagasc, Moorepark Food Research Centre GCA_000015385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/385/GCF_000015385.1_ASM1538v1/ na na na haploid bacteria 2080931 2080931 37.000000 1 1 1 NCBI RefSeq GCF_000015385.1-RS_2026_03_20 2026-03-20 2162 1787 76 17993529 GCF_000015445.1 PRJNA224116 SAMN02604047 na reference genome 360095 774 Bartonella bacilliformis KC583 strain=KC583; ATCC 35685 na latest Complete Genome Major Full 2007-01-04 ASM1544v1 TIGR GCA_000015445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/445/GCF_000015445.1_ASM1544v1/ na assembly from type material na haploid bacteria 1445021 1445021 38.000000 1 1 1 NCBI RefSeq GCF_000015445.1-RS_2026_04_29 2026-04-29 1270 1166 54 na GCF_000015465.1 PRJNA224116 SAMN02604034 na na 320388 13373 Burkholderia mallei SAVP1 strain=SAVP1 na latest Complete Genome Major Full 2007-01-05 ASM1546v1 TIGR GCA_000015465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/465/GCF_000015465.1_ASM1546v1/ na na na haploid bacteria 5232401 5232401 68.500000 2 2 2 NCBI RefSeq GCF_000015465.1-RS_2026_02_14 2026-02-14 4755 4468 69 na GCF_000015485.1 PRJNA224116 SAMN02598381 na reference genome 391774 881 Nitratidesulfovibrio vulgaris DP4 strain=DP4 na latest Complete Genome Major Full 2007-01-03 ASM1548v1 DOE Joint Genome Institute GCA_000015485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/485/GCF_000015485.1_ASM1548v1/ na na na haploid bacteria 3661391 3661391 63.000000 2 2 2 NCBI RefSeq GCF_000015485.1-RS_2025_12_11 2025-12-11 3170 3072 89 na GCF_000015505.1 PRJNA224116 SAMN02598302 na reference genome 365044 216465 Polaromonas naphthalenivorans CJ2 strain=CJ2 na latest Complete Genome Major Full 2007-01-04 ASM1550v1 DOE Joint Genome Institute GCA_000015505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/505/GCF_000015505.1_ASM1550v1/ na assembly from type material na haploid bacteria 5366143 5366143 61.500000 9 9 9 NCBI RefSeq GCF_000015505.1-RS_2025_12_13 2025-12-13 5171 4994 61 na GCF_000015525.1 PRJNA224116 SAMN02604044 na na 354242 197 Campylobacter jejuni subsp. jejuni 81-176 strain=81-176 na latest Complete Genome Major Full 2007-01-09 ASM1552v1 TIGR GCA_000015525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/525/GCF_000015525.1_ASM1552v1/ na na na haploid bacteria 1699052 1699052 30.500000 3 3 3 NCBI RefSeq GCF_000015525.1-RS_2025_07_09 2025-07-09 1761 1645 56 na GCF_000015565.1 PRJNA224116 SAMN02598379 na reference genome 391735 364317 Verminephrobacter eiseniae EF01-2 strain=EF01-2 na latest Complete Genome Major Full 2007-01-09 ASM1556v1 DOE Joint Genome Institute GCA_000015565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/565/GCF_000015565.1_ASM1556v1/ na assembly from type material na haploid bacteria 5597943 5597943 65.000000 2 2 2 NCBI RefSeq GCF_000015565.1-RS_2025_12_13 2025-12-13 5339 5104 59 na GCF_000015585.1 PRJNA224116 SAMN00623046 na reference genome 349124 1053 Halorhodospira halophila SL1 strain=SL1 na latest Complete Genome Major Full 2007-01-10 ASM1558v1 DOE Joint Genome Institute GCA_000015585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/585/GCF_000015585.1_ASM1558v1/ na assembly from type material na haploid bacteria 2678452 2678452 68.000000 1 1 1 NCBI RefSeq GCF_000015585.1-RS_2026_04_26 2026-04-26 2523 2438 56 23991253 GCF_000015605.1 PRJNA224116 SAMN02604032 na na 412022 13373 Burkholderia mallei NCTC 10229 strain=NCTC 10229 na latest Complete Genome Major Full 2007-01-30 ASM1560v1 TIGR GCA_000015605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/605/GCF_000015605.1_ASM1560v1/ na na na haploid bacteria 5742303 5742303 68.500000 2 2 2 NCBI RefSeq GCF_000015605.1-RS_2026_02_14 2026-02-14 5206 4887 71 na GCF_000015625.1 PRJNA224116 SAMN02604033 na na 320389 13373 Burkholderia mallei NCTC 10247 strain=NCTC 10247 na latest Complete Genome Major Full 2007-02-27 ASM1562v1 TIGR GCA_000015625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/625/GCF_000015625.1_ASM1562v1/ na na na haploid bacteria 5848380 5848380 68.500000 2 2 2 NCBI RefSeq GCF_000015625.1-RS_2026_02_14 2026-02-14 5297 4973 70 na GCF_000015645.1 PRJNA224116 SAMN02603921 na na 146891 1219 Prochlorococcus marinus str. AS9601 strain=AS9601 na latest Complete Genome Major Full 2007-01-19 ASM1564v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000015645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/645/GCF_000015645.1_ASM1564v1/ na na na haploid bacteria 1669886 1669886 31.500000 1 1 1 NCBI RefSeq GCF_000015645.1-RS_2025_05_21 2025-05-21 1896 1846 44 18159947 GCF_000015665.1 PRJNA224116 SAMN02603924 na reference genome 167542 1219 Prochlorococcus marinus str. MIT 9515 strain=MIT 9515 na latest Complete Genome Major Full 2007-01-19 ASM1566v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000015665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/665/GCF_000015665.1_ASM1566v1/ na na na haploid bacteria 1704176 1704176 31.000000 1 1 1 NCBI RefSeq GCF_000015665.1-RS_2026_03_30 2026-03-30 1924 1878 43 18159947 GCF_000015685.1 PRJNA224116 SAMN02603287 na na 167555 1219 Prochlorococcus marinus str. NATL1A strain=NATL1A na latest Complete Genome Major Full 2007-01-22 ASM1568v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000015685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/685/GCF_000015685.1_ASM1568v1/ na na na haploid bacteria 1864731 1864731 35.000000 1 1 1 NCBI RefSeq GCF_000015685.1-RS_2025_01_27 2025-01-27 2135 2083 44 na GCF_000015705.1 PRJNA224116 SAMN02603917 na na 59922 1219 Prochlorococcus marinus str. MIT 9303 strain=MIT 9303 na latest Complete Genome Major Full 2007-01-22 ASM1570v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000015705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/705/GCF_000015705.1_ASM1570v1/ na na na haploid bacteria 2682675 2682675 50.000000 1 1 1 NCBI RefSeq GCF_000015705.1-RS_2025_05_21 2025-05-21 2689 2587 54 18159947 GCF_000015725.1 PRJNA224116 SAMN02598264 na reference genome 420662 105560 Methylibium petroleiphilum PM1 strain=PM1 na latest Complete Genome Major Full 2007-01-29 ASM1572v1 DOE Joint Genome Institute GCA_000015725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/725/GCF_000015725.1_ASM1572v1/ na assembly from type material na haploid bacteria 4643639 4643639 69.000000 2 2 2 NCBI RefSeq GCF_000015725.1-RS_2025_08_18 2025-08-18 4594 4473 75 17158667 GCF_000015745.1 PRJNA224116 SAMN02603899 na na 420246 33940 Geobacillus thermodenitrificans NG80-2 strain=NG80-2 na latest Complete Genome Major Full 2007-03-29 ASM1574v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000015745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/745/GCF_000015745.1_ASM1574v1/ na na na haploid bacteria 3608012 3608012 49.000000 2 2 2 NCBI RefSeq GCF_000015745.1-RS_2026_02_06 2026-02-06 3681 3462 123 17372208 GCF_000015765.1 PRJNA224116 SAMN00623052 na reference genome 410358 83984 Methanocorpusculum labreanum Z strain=Z na latest Complete Genome Major Full 2007-02-01 ASM1576v1 DOE Joint Genome Institute GCA_000015765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/765/GCF_000015765.1_ASM1576v1/ na assembly from type material na haploid archaea 1804962 1804962 50.000000 1 1 1 NCBI RefSeq GCF_000015765.1-RS_2025_11_20 2025-11-20 1870 1804 64 21304657 GCF_000015785.2 PRJNA224116 SAMN02603158 na reference genome 326423 492670 Bacillus velezensis FZB42 strain=FZB42 na latest Complete Genome Major Full 2019-06-24 ASM1578v2 Competence Network GCA_000015785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/785/GCF_000015785.2_ASM1578v2/ na assembly from heterotypic synonym type material na haploid bacteria 3918596 3918596 46.500000 1 1 1 NCBI RefSeq GCF_000015785.2-RS_2026_05_17 2026-05-17 3885 3681 121 17704766 GCF_000015805.1 PRJNA224116 SAMN00623060 na reference genome 410359 181486 Pyrobaculum calidifontis JCM 11548 strain=JCM 11548 na latest Complete Genome Major Full 2007-02-27 ASM1580v1 DOE Joint Genome Institute GCA_000015805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/805/GCF_000015805.1_ASM1580v1/ na assembly from type material na haploid archaea 2009313 2009313 57.000000 1 1 1 NCBI RefSeq GCF_000015805.1-RS_2025_11_28 2025-11-28 2323 2258 49 na GCF_000015825.1 PRJNA224116 SAMN02598365 na reference genome 368407 2198 Methanoculleus marisnigri JR1 strain=JR1 na latest Complete Genome Major Full 2007-02-16 ASM1582v1 DOE Joint Genome Institute GCA_000015825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/825/GCF_000015825.1_ASM1582v1/ na assembly from type material na haploid archaea 2478101 2478101 62.000000 1 1 1 NCBI RefSeq GCF_000015825.1-RS_2025_11_21 2025-11-21 2519 2457 54 21304656 GCF_000015845.1 PRJNA224116 SAMN02598299 na na 325240 62322 Shewanella baltica OS155 strain=OS155 na latest Complete Genome Major Full 2007-02-20 ASM1584v1 US DOE Joint Genome Institute GCA_000015845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/845/GCF_000015845.1_ASM1584v1/ na na na haploid bacteria 5342896 5342896 46.000000 5 5 5 NCBI RefSeq GCF_000015845.1-RS_2025_12_16 2025-12-16 4716 4406 151 27777983 GCF_000015865.1 PRJNA224116 SAMN02598481 na reference genome 203119 1515 Acetivibrio thermocellus ATCC 27405 strain=ATCC 27405 na latest Complete Genome Major Full 2007-02-14 ASM1586v1 NCBI GCA_000015865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/865/GCF_000015865.1_ASM1586v1/ na assembly from type material na haploid bacteria 3843301 3843301 39.000000 1 1 1 NCBI RefSeq GCF_000015865.1-RS_2025_08_23 2025-08-23 3405 3271 72 24295562 GCF_000015885.1 PRJNA224116 SAMN02603665 na na 416269 715 Actinobacillus pleuropneumoniae serovar 5b str. L20 strain=L20 na latest Complete Genome Major Full 2007-02-23 ASM1588v1 National Research Council of Canada GCA_000015885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/885/GCF_000015885.1_ASM1588v1/ na na na haploid bacteria 2274482 2274482 41.500000 1 1 1 NCBI RefSeq GCF_000015885.1-RS_2025_08_18 2025-08-18 2170 2029 85 18065534 GCF_000015905.1 PRJNA224116 SAMN02604035 na na 320373 28450 Burkholderia pseudomallei 668 strain=668 na latest Complete Genome Major Full 2007-02-27 ASM1590v1 TIGR GCA_000015905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/905/GCF_000015905.1_ASM1590v1/ na na na haploid bacteria 7040403 7040403 68.500000 2 2 2 NCBI RefSeq GCF_000015905.1-RS_2026_02_14 2026-02-14 6292 6088 76 na GCF_000015925.1 PRJNA224116 SAMN02604046 na na 357348 28450 Burkholderia pseudomallei 1106a strain=1106a na latest Complete Genome Major Full 2007-02-27 ASM1592v1 TIGR GCA_000015925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/925/GCF_000015925.1_ASM1592v1/ na na na haploid bacteria 7089249 7089249 68.500000 2 2 2 NCBI RefSeq GCF_000015925.1-RS_2026_02_14 2026-02-14 6276 6099 76 na GCF_000015945.1 PRJNA224116 SAMN02598390 na reference genome 399550 2280 Staphylothermus marinus F1 strain=F1 na latest Complete Genome Major Full 2007-02-21 ASM1594v1 US DOE Joint Genome Institute GCA_000015945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/945/GCF_000015945.1_ASM1594v1/ na assembly from type material na haploid archaea 1570485 1570485 35.500000 1 1 1 NCBI RefSeq GCF_000015945.1-RS_2026_04_23 2026-04-23 1699 1642 50 21304655 GCF_000015965.1 PRJNA224116 SAMN02603288 na na 167546 1219 Prochlorococcus marinus str. MIT 9301 strain=MIT 9301 na latest Complete Genome Major Full 2007-03-05 ASM1596v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000015965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/965/GCF_000015965.1_ASM1596v1/ na na na haploid bacteria 1641879 1641879 31.500000 1 1 1 NCBI RefSeq GCF_000015965.1-RS_2025_05_23 2025-05-23 1898 1850 43 18159947 GCF_000015985.1 PRJNA224116 SAMN02598340 na na 349101 1063 Cereibacter sphaeroides ATCC 17029 strain=ATCC 17029 na latest Complete Genome Major Full 2007-02-23 ASM1598v1 US DOE Joint Genome Institute GCA_000015985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/015/985/GCF_000015985.1_ASM1598v1/ na na na haploid bacteria 4489380 4489380 69.000000 3 3 3 NCBI RefSeq GCF_000015985.1-RS_2026_03_23 2026-03-23 4309 4194 71 17172323 GCF_000016045.1 PRJNA224116 SAMN02604062 na na 423368 28901 Salmonella enterica subsp. enterica serovar Newport str. SL254 strain=SL254 na latest Complete Genome Major Full 2008-07-24 ASM1604v1 TIGR GCA_000016045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/045/GCF_000016045.1_ASM1604v1/ na na na haploid bacteria 5007719 5007719 52.000000 3 3 3 NCBI RefSeq GCF_000016045.1-RS_2025_05_23 2025-05-23 4936 4678 121 17375195;21602358 GCF_000016065.1 PRJNA224116 SAMN00623064 na reference genome 323850 359303 Shewanella loihica PV-4 strain=PV-4 na latest Complete Genome Major Full 2007-03-07 ASM1606v1 US DOE Joint Genome Institute GCA_000016065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/065/GCF_000016065.1_ASM1606v1/ na assembly from type material na haploid bacteria 4602594 4602594 53.500000 1 1 1 NCBI RefSeq GCF_000016065.1-RS_2025_08_18 2025-08-18 4037 3898 125 na GCF_000016105.1 PRJNA224116 SAMN02603036 na na 418136 263 Francisella tularensis subsp. tularensis WY96-3418 strain=WY96-3418 na latest Complete Genome Major Full 2007-03-24 ASM1610v1 BioHealthBase GCA_000016105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/105/GCF_000016105.1_ASM1610v1/ na na na haploid bacteria 1898476 1898476 32.500000 1 1 1 NCBI RefSeq GCF_000016105.1-RS_2026_06_11 2026-06-11 1940 1730 52 17895988 GCF_000016125.1 PRJNA224116 SAMN02598397 na na 402880 39152 Methanococcus maripaludis C5 strain=C5 na latest Complete Genome Major Full 2007-03-15 ASM1612v1 DOE Joint Genome Institute GCA_000016125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/125/GCF_000016125.1_ASM1612v1/ na na na haploid archaea 1789046 1789046 33.000000 2 2 2 NCBI RefSeq GCF_000016125.1-RS_2026_02_18 2026-02-18 1920 1852 50 na GCF_000016145.1 PRJNA224116 SAMN02603128 na na 419947 1773 Mycobacterium tuberculosis H37Ra strain=H37Ra; ATCC 25177 na latest Complete Genome Major Full 2007-05-31 ASM1614v1 Chinese National Human Genome Center at Shanghai GCA_000016145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/145/GCF_000016145.1_ASM1614v1/ na na na haploid bacteria 4419977 4419977 65.500000 1 1 1 NCBI RefSeq GCF_000016145.1-RS_2025_05_23 2025-05-23 4175 3946 51 18584054 GCF_000016165.1 PRJNA224116 SAMN02598304 na reference genome 349161 59610 Desulforamulus reducens MI-1 strain=MI-1 na latest Complete Genome Major Full 2007-03-24 ASM1616v1 US DOE Joint Genome Institute GCA_000016165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/165/GCF_000016165.1_ASM1616v1/ na assembly from type material na haploid bacteria 3608104 3608104 42.500000 1 1 1 NCBI RefSeq GCF_000016165.1-RS_2026_03_27 2026-03-27 3649 3495 102 na GCF_000016185.1 PRJNA224116 SAMN02603908 na na 414684 34018 Rhodospirillum centenum SW strain=SW; ATCC 51521 na latest Complete Genome Major Full 2010-02-17 ASM1618v1 TGen GCA_000016185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/185/GCF_000016185.1_ASM1618v1/ na na na haploid bacteria 4355543 4355543 70.500000 1 1 1 NCBI RefSeq GCF_000016185.1-RS_2026_03_15 2026-03-15 4009 3921 68 20500872 GCF_000016245.1 PRJNA224116 SAMN02604040 na na 345073 666 Vibrio cholerae O395 strain=O395 na latest Complete Genome Major Full 2007-05-08 ASM1624v1 TIGR GCA_000016245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/245/GCF_000016245.1_ASM1624v1/ na na na haploid bacteria 4132319 4132319 47.500000 2 2 2 NCBI RefSeq GCF_000016245.1-RS_2026_03_20 2026-03-20 3857 3659 127 na GCF_000016265.1 PRJNA224116 SAMN02602977 na na 311403 359 Rhizobium rhizogenes K84 strain=K84 ATCC BAA-868 latest Complete Genome Major Full 2009-01-27 ASM1626v1 Agrobacterium consortium GCA_000016265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/265/GCF_000016265.1_ASM1626v1/ na na na haploid bacteria 7273300 7273300 60.000000 5 5 5 NCBI RefSeq GCF_000016265.1-RS_2026_06_01 2026-06-01 6926 6747 65 19251847 GCF_000016285.1 PRJNA224116 SAMN02602976 na reference genome 311402 3025782 Allorhizobium ampelinum S4 strain=S4 Kecskemet-Hungary; ATCC BAA-846 latest Complete Genome Major Full 2009-01-27 ASM1628v1 Agrobacterium consortium GCA_000016285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/285/GCF_000016285.1_ASM1628v1/ na assembly from type material na haploid bacteria 6320946 6320946 57.500000 7 7 7 NCBI RefSeq GCF_000016285.1-RS_2026_03_03 2026-03-03 5819 5591 71 19251847 GCF_000016305.1 PRJNA224116 SAMN02603941 na na 272620 573 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 strain=ATCC 700721; MGH 78578 na latest Complete Genome Major Full 2007-07-05 ASM1630v1 The Klebsiella pneumoniae Genome Sequencing Project GCA_000016305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/305/GCF_000016305.1_ASM1630v1/ na na na haploid bacteria 5694894 5694894 57.000000 6 6 6 NCBI RefSeq GCF_000016305.1-RS_2025_03_23 2025-03-23 5603 5321 123 11677609 GCF_000016325.1 PRJNA224116 SAMN02598394 na na 399742 399742 Enterobacter sp. 638 strain=638 na latest Complete Genome Major Full 2007-04-18 ASM1632v1 US DOE Joint Genome Institute GCA_000016325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/325/GCF_000016325.1_ASM1632v1/ na na na haploid bacteria 4676461 4676461 53.000000 2 2 2 NCBI RefSeq GCF_000016325.1-RS_2024_07_02 2024-07-02 4536 4357 114 na GCF_000016345.1 PRJNA224116 SAMN02598371 na reference genome 312153 576611 Polynucleobacter asymbioticus QLW-P1DMWA-1 strain=QLW-P1DMWA-1 na latest Complete Genome Major Full 2007-04-12 ASM1634v1 DOE Joint Genome Institute GCA_000016345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/345/GCF_000016345.1_ASM1634v1/ na assembly from type material na haploid bacteria 2159490 2159490 45.000000 1 1 1 NCBI RefSeq GCF_000016345.1-RS_2025_12_09 2025-12-09 2176 2117 45 22448227;22675600 GCF_000016385.1 PRJNA224116 SAMN02598330 na reference genome 340102 121277 Pyrobaculum arsenaticum DSM 13514 strain=DSM 13514 na latest Complete Genome Major Full 2007-04-16 ASM1638v1 DOE Joint Genome Institute GCA_000016385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/385/GCF_000016385.1_ASM1638v1/ na assembly from type material na haploid archaea 2121076 2121076 55.000000 1 1 1 NCBI RefSeq GCF_000016385.1-RS_2026_04_02 2026-04-02 2526 2446 49 na GCF_000016425.1 PRJNA224116 SAMN02598367 na reference genome 369723 168695 Salinispora tropica CNB-440 strain=CNB-440 na latest Complete Genome Major Full 2007-04-17 ASM1642v1 US DOE Joint Genome Institute GCA_000016425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/425/GCF_000016425.1_ASM1642v1/ na assembly from type material na haploid bacteria 5183331 5183331 69.500000 1 1 1 NCBI RefSeq GCF_000016425.1-RS_2026_03_27 2026-03-27 4778 4539 64 19590008 GCF_000016445.1 PRJNA224116 SAMN02598373 na na 386656 632 Yersinia pestis Pestoides F strain=Pestoides F na latest Complete Genome Major Full 2007-04-13 ASM1644v1 US DOE Joint Genome Institute GCA_000016445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/445/GCF_000016445.1_ASM1644v1/ na na na haploid bacteria 4725862 4725862 47.500000 3 3 3 NCBI RefSeq GCF_000016445.1-RS_2026_04_01 2026-04-01 4321 3990 104 na GCF_000016505.1 PRJNA224116 SAMN02603294 na na 431943 1534 Clostridium kluyveri DSM 555 strain=DSM 555 na latest Complete Genome Major Full 2007-07-19 ASM1650v1 Gottingen Genomics Laboratory G2L GCA_000016505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/505/GCF_000016505.1_ASM1650v1/ na assembly from type material na haploid bacteria 4023800 4023800 32.000000 2 2 2 NCBI RefSeq GCF_000016505.1-RS_2026_04_14 2026-04-14 4067 3897 85 18218779 GCF_000016525.1 PRJNA224116 SAMN02604313 na reference genome 420247 2173 Methanobrevibacter smithii ATCC 35061 strain=ATCC 35061; PS; DSMZ 861 na latest Complete Genome Major Full 2007-06-04 ASM1652v1 Washington University Center for Genome Sciences GCA_000016525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/525/GCF_000016525.1_ASM1652v1/ na assembly from type material na haploid archaea 1853160 1853160 31.000000 1 1 1 NCBI RefSeq GCF_000016525.1-RS_2025_12_04 2025-12-04 1814 1748 45 17563350 GCF_000016545.1 PRJNA224116 SAMN00623033 na reference genome 351627 44001 Caldicellulosiruptor saccharolyticus DSM 8903 strain=DSM 8903 na latest Complete Genome Major Full 2007-04-19 ASM1654v1 US DOE Joint Genome Institute GCA_000016545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/545/GCF_000016545.1_ASM1654v1/ na assembly from type material na haploid bacteria 2970275 2970275 35.500000 1 1 1 NCBI RefSeq GCF_000016545.1-RS_2025_12_13 2025-12-13 2927 2736 59 18776029 GCF_000016605.1 PRJNA224116 SAMN02598389 na na 399549 43687 Metallosphaera sedula DSM 5348 strain=DSM 5348 na latest Complete Genome Major Full 2007-04-25 ASM1660v1 US DOE Joint Genome Institute GCA_000016605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/605/GCF_000016605.1_ASM1660v1/ na assembly from type material na haploid archaea 2191517 2191517 46.000000 1 1 1 NCBI RefSeq GCF_000016605.1-RS_2025_11_23 2025-11-23 2410 2335 51 18083856 GCF_000016625.1 PRJNA224116 SAMN02603147 na na 416276 35791 Rickettsia massiliae MTU5 strain=MTU5 na latest Complete Genome Major Full 2007-10-04 ASM1662v1 CNRS GCA_000016625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/625/GCF_000016625.1_ASM1662v1/ na na na haploid bacteria 1376184 1376184 32.500000 2 2 2 NCBI RefSeq GCF_000016625.1-RS_2025_01_08 2025-01-08 1588 1348 40 17916642 GCF_000016645.1 PRJNA224116 SAMN02598357 na reference genome 376686 986 Flavobacterium johnsoniae UW101 strain=UW101; ATCC 17061 na latest Complete Genome Major Full 2007-05-01 ASM1664v1 US DOE Joint Genome Institute GCA_000016645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/645/GCF_000016645.1_ASM1664v1/ na assembly from type material na haploid bacteria 6096872 6096872 34.000000 1 1 1 NCBI RefSeq GCF_000016645.1-RS_2025_12_11 2025-12-11 5249 5139 83 19717629 GCF_000016665.1 PRJNA224116 SAMN02598362 na na 357808 357808 Roseiflexus sp. RS-1 strain=RS-1 na latest Complete Genome Major Full 2007-06-04 ASM1666v1 US DOE Joint Genome Institute GCA_000016665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/665/GCF_000016665.1_ASM1666v1/ na na na haploid bacteria 5801598 5801598 60.500000 1 1 1 NCBI RefSeq GCF_000016665.1-RS_2025_08_25 2025-08-25 4834 4705 57 na GCF_000016685.1 PRJNA224116 SAMN02603312 na na 434271 715 Actinobacillus pleuropneumoniae serovar 3 str. JL03 strain=JL03 na latest Complete Genome Major Full 2008-01-16 ASM1668v1 Huazhong Agricultural University GCA_000016685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/685/GCF_000016685.1_ASM1668v1/ na na na haploid bacteria 2242062 2242062 41.000000 1 1 1 NCBI RefSeq GCF_000016685.1-RS_2026_04_16 2026-04-16 2121 1976 86 18197260 GCF_000016725.1 PRJNA224116 SAMN02598339 na na 349163 524 Acidiphilium cryptum JF-5 strain=JF-5 na latest Complete Genome Major Full 2007-05-11 ASM1672v1 US DOE Joint Genome Institute GCA_000016725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/725/GCF_000016725.1_ASM1672v1/ na na na haploid bacteria 3963080 3963080 67.000000 9 9 9 NCBI RefSeq GCF_000016725.1-RS_2025_03_13 2025-03-13 3775 3619 58 na GCF_000016745.1 PRJNA224116 SAMN02598352 na reference genome 351605 351604 Geotalea uraniireducens Rf4 strain=Rf4 na latest Complete Genome Major Full 2007-05-11 ASM1674v1 US DOE Joint Genome Institute GCA_000016745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/745/GCF_000016745.1_ASM1674v1/ na assembly from type material na haploid bacteria 5136364 5136364 54.000000 1 1 1 NCBI RefSeq GCF_000016745.1-RS_2025_12_10 2025-12-10 4602 4495 61 na GCF_000016785.1 PRJNA224116 SAMN02598377 na reference genome 390874 93929 Thermotoga petrophila RKU-1 strain=RKU-1 na latest Complete Genome Major Full 2007-05-18 ASM1678v1 US DOE Joint Genome Institute GCA_000016785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/785/GCF_000016785.1_ASM1678v1/ na assembly from type material na haploid bacteria 1823511 1823511 46.000000 1 1 1 NCBI RefSeq GCF_000016785.1-RS_2026_03_27 2026-03-27 1871 1806 52 19307556 GCF_000016805.1 PRJNA224116 SAMN02598343 na na 359786 1280 Staphylococcus aureus subsp. aureus JH9 strain=JH9 na latest Complete Genome Major Full 2007-05-18 ASM1680v1 US DOE Joint Genome Institute GCA_000016805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/805/GCF_000016805.1_ASM1680v1/ na na na haploid bacteria 2937129 2937129 33.000000 2 2 2 NCBI RefSeq GCF_000016805.1-RS_2025_01_09 2025-01-09 2965 2806 81 na GCF_000016825.1 PRJNA224116 SAMN02598351 na na 557436 1598 Limosilactobacillus reuteri subsp. reuteri strain=DSM 20016 na latest Complete Genome Major Full 2007-06-01 ASM1682v1 US DOE Joint Genome Institute GCA_000016825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/825/GCF_000016825.1_ASM1682v1/ na assembly from type material na haploid bacteria 1999618 1999618 39.000000 1 1 1 NCBI RefSeq GCF_000016825.1-RS_2026_02_06 2026-02-06 2055 1902 90 na GCF_000016845.1 PRJNA224116 SAMN02604024 na reference genome 444178 236 Brucella ovis ATCC 25840 strain=ATCC 25840 na latest Complete Genome Major Full 2007-05-30 ASM1684v1 TIGR GCA_000016845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/845/GCF_000016845.1_ASM1684v1/ na assembly from type material na haploid bacteria 3275590 3275590 57.000000 2 2 2 NCBI RefSeq GCF_000016845.1-RS_2026_05_01 2026-05-01 3205 2815 66 na GCF_000016905.1 PRJNA224116 SAMN00623068 na reference genome 391009 46541 Thermosipho melanesiensis BI429 strain=BI429 na latest Complete Genome Major Full 2007-06-26 ASM1690v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000016905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/905/GCF_000016905.1_ASM1690v1/ na assembly from type material na haploid bacteria 1915238 1915238 31.500000 1 1 1 NCBI RefSeq GCF_000016905.1-RS_2026_03_27 2026-03-27 2027 1946 65 19307556 GCF_000016925.1 PRJNA224116 SAMN00103286 na na 336982 1773 Mycobacterium tuberculosis F11 strain=F11 na latest Complete Genome Major Full 2007-06-07 ASM1692v1 Broad Institute GCA_000016925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/925/GCF_000016925.1_ASM1692v1/ na na na haploid bacteria 4424435 4424435 65.500000 1 1 1 NCBI RefSeq GCF_000016925.1-RS_2025_06_28 2025-06-28 4171 3931 51 na GCF_000016945.1 PRJNA224116 SAMN02604043 na na 349747 633 Yersinia pseudotuberculosis IP 31758 strain=IP 31758 na latest Complete Genome Major Full 2007-07-23 ASM1694v1 TIGR GCA_000016945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/945/GCF_000016945.1_ASM1694v1/ na na na haploid bacteria 4935125 4935125 47.000000 3 3 3 NCBI RefSeq GCF_000016945.1-RS_2026_03_31 2026-03-31 4415 4176 116 17784789 GCF_000016965.1 PRJNA224116 SAMN02598276 na na 290402 1520 Clostridium beijerinckii NCIMB 8052 strain=NCIMB 8052 na latest Complete Genome Major Full 2007-06-27 ASM1696v1 US DOE Joint Genome Institute GCA_000016965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/965/GCF_000016965.1_ASM1696v1/ na na na haploid bacteria 6000632 6000632 30.000000 1 1 1 NCBI RefSeq GCF_000016965.1-RS_2026_03_31 2026-03-31 5409 5208 143 21962126;22433311 GCF_000016985.1 PRJNA224116 SAMN02598282 na reference genome 293826 208226 Alkaliphilus metalliredigens QYMF strain=QYMF na latest Complete Genome Major Full 2007-06-28 ASM1698v1 US DOE Joint Genome Institute GCA_000016985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/016/985/GCF_000016985.1_ASM1698v1/ na assembly from type material na haploid bacteria 4929566 4929566 37.000000 1 1 1 NCBI RefSeq GCF_000016985.1-RS_2025_12_13 2025-12-13 5015 4824 141 na GCF_000017005.1 PRJNA224116 SAMN02603977 na na 467705 1302 Streptococcus gordonii str. Challis substr. CH1 strain=Challis substr. CH1 na latest Complete Genome Major Full 2007-09-11 ASM1700v1 TIGR GCA_000017005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/005/GCF_000017005.1_ASM1700v1/ na na na haploid bacteria 2196662 2196662 40.500000 1 1 1 NCBI RefSeq GCF_000017005.1-RS_2026_03_27 2026-03-27 2131 2014 74 17720781 GCF_000017025.1 PRJNA224116 SAMN02603532 na na 441770 1491 Clostridium botulinum A str. ATCC 19397 strain=ATCC 19397 na latest Complete Genome Major Full 2007-07-20 ASM1702v1 Los Alamos National Laboratory GCA_000017025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/025/GCF_000017025.1_ASM1702v1/ na na na haploid bacteria 3863450 3863450 28.000000 1 1 1 NCBI RefSeq GCF_000017025.1-RS_2026_04_01 2026-04-01 3653 3497 109 18060065 GCF_000017045.1 PRJNA224116 SAMN02603534 na na 441771 1491 Clostridium botulinum A str. Hall strain=Hall na latest Complete Genome Major Full 2007-07-20 ASM1704v1 Los Alamos National Laboratory GCA_000017045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/045/GCF_000017045.1_ASM1704v1/ na na na haploid bacteria 3760560 3760560 28.000000 1 1 1 NCBI RefSeq GCF_000017045.1-RS_2026_04_01 2026-04-01 3518 3344 109 18060065 GCF_000017065.1 PRJNA224116 SAMN02603533 na na 441772 1491 Clostridium botulinum F str. Langeland strain=Langeland na latest Complete Genome Major Full 2007-07-20 ASM1706v1 Los Alamos National Laboratory GCA_000017065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/065/GCF_000017065.1_ASM1706v1/ na na na haploid bacteria 4012918 4012918 28.500000 2 2 2 NCBI RefSeq GCF_000017065.1-RS_2026_04_14 2026-04-14 3780 3615 112 na GCF_000017085.1 PRJNA224116 SAMN00253845 na na 451516 1280 Staphylococcus aureus subsp. aureus USA300_TCH1516 strain=USA300_TCH1516 na latest Complete Genome Major Full 2009-03-24 ASM1708v1 Baylor College of Medicine GCA_000017085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/085/GCF_000017085.1_ASM1708v1/ na na na haploid bacteria 2903081 2903081 32.500000 3 3 3 NCBI RefSeq GCF_000017085.1-RS_2025_04_26 2025-04-26 2924 2753 79 17986343 GCF_000017105.1 PRJNA224116 SAMN02603436 na na 434922 777 Coxiella burnetii Dugway 5J108-111 strain=Dugway 5J108-111 na latest Complete Genome Major Full 2007-08-01 ASM1710v1 J. Craig Venter Institute GCA_000017105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/105/GCF_000017105.1_ASM1710v1/ na na na haploid bacteria 2212937 2212937 42.500000 2 2 2 NCBI RefSeq GCF_000017105.1-RS_2025_04_15 2025-04-15 2246 2040 51 19047403 GCF_000017145.1 PRJNA224116 SAMN02598363 na na 366394 110321 Sinorhizobium medicae WSM419 strain=WSM419 na latest Complete Genome Major Full 2007-06-29 ASM1714v1 US DOE Joint Genome Institute GCA_000017145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/145/GCF_000017145.1_ASM1714v1/ na na na haploid bacteria 6817576 6817576 61.000000 4 4 4 NCBI RefSeq GCF_000017145.1-RS_2026_03_15 2026-03-15 6532 6159 68 21304680 GCF_000017165.1 PRJNA224116 SAMN02598403 na reference genome 406327 2187 Methanococcus vannielii SB strain=SB na latest Complete Genome Major Full 2007-06-29 ASM1716v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000017165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/165/GCF_000017165.1_ASM1716v1/ na assembly from type material na haploid archaea 1720048 1720048 31.500000 1 1 1 NCBI RefSeq GCF_000017165.1-RS_2025_11_21 2025-11-21 1778 1711 53 na GCF_000017185.1 PRJNA224116 SAMN00623051 na reference genome 419665 42879 Methanococcus aeolicus Nankai-3 strain=Nankai-3 na latest Complete Genome Major Full 2007-06-29 ASM1718v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000017185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/185/GCF_000017185.1_ASM1718v1/ na assembly from type material na haploid archaea 1569500 1569500 30.000000 1 1 1 NCBI RefSeq GCF_000017185.1-RS_2025_11_21 2025-11-21 1573 1510 49 na GCF_000017205.1 PRJNA224116 SAMN02603435 na na 381754 2994495 Pseudomonas paraeruginosa PA7 strain=PA7 na latest Complete Genome Major Full 2007-07-05 ASM1720v1 J. Craig Venter Institute GCA_000017205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/205/GCF_000017205.1_ASM1720v1/ na na na haploid bacteria 6588339 6588339 66.500000 1 1 1 NCBI RefSeq GCF_000017205.1-RS_2025_09_21 2025-09-21 6201 6018 79 20107499 GCF_000017245.1 PRJNA224116 SAMN02598296 na reference genome 339671 67854 Actinobacillus succinogenes 130Z strain=130Z na latest Complete Genome Major Full 2007-07-05 ASM1724v1 US DOE Joint Genome Institute GCA_000017245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/245/GCF_000017245.1_ASM1724v1/ na assembly from type material na haploid bacteria 2319663 2319663 45.000000 1 1 1 NCBI RefSeq GCF_000017245.1-RS_2025_11_23 2025-11-23 2219 2104 84 na GCF_000017265.1 PRJNA224116 SAMN02603048 na reference genome 450851 284016 Phenylobacterium zucineum HLK1 strain=HLK1 na latest Complete Genome Major Full 2008-08-18 ASM1726v1 Cancer Institute, The Second Affiliated Hospital, Zhejiang University Medical School GCA_000017265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/265/GCF_000017265.1_ASM1726v1/ na assembly from type material na haploid bacteria 4379231 4379231 71.000000 2 2 2 NCBI RefSeq GCF_000017265.1-RS_2025_12_11 2025-12-11 4347 4268 49 18700039 GCF_000017305.1 PRJNA224116 SAMN02598259 na reference genome 266940 131568 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 strain=SRS30216 na latest Complete Genome Major Full 2008-08-14 ASM1730v1 US DOE Joint Genome Institute GCA_000017305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/305/GCF_000017305.1_ASM1730v1/ na assembly from type material na haploid bacteria 4956672 4956672 74.000000 3 3 3 NCBI RefSeq GCF_000017305.1-RS_2026_03_30 2026-03-30 4770 4664 64 na GCF_000017325.1 PRJNA224116 SAMN02598398 na na 402882 62322 Shewanella baltica OS185 strain=OS185 na latest Complete Genome Major Full 2007-07-10 ASM1732v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000017325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/325/GCF_000017325.1_ASM1732v1/ na na na haploid bacteria 5312910 5312910 46.500000 2 2 2 NCBI RefSeq GCF_000017325.1-RS_2025_12_03 2025-12-03 4620 4422 142 27777983 GCF_000017405.1 PRJNA224116 SAMN02598421 na na 439375 529 Brucella anthropi ATCC 49188 strain=ATCC 49188 na latest Complete Genome Major Full 2007-07-12 ASM1740v1 US DOE Joint Genome Institute GCA_000017405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/405/GCF_000017405.1_ASM1740v1/ na assembly from type material na haploid bacteria 5205777 5205777 56.000000 6 6 6 NCBI RefSeq GCF_000017405.1-RS_2024_09_03 2024-09-03 5003 4848 76 21685287 GCF_000017425.1 PRJNA224116 SAMN02598310 na reference genome 315749 580165 Bacillus cytotoxicus NVH 391-98 strain=NVH 391-98 na latest Complete Genome Major Full 2007-07-17 ASM1742v1 US DOE Joint Genome Institute GCA_000017425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/425/GCF_000017425.1_ASM1742v1/ na assembly from type material na haploid bacteria 4094159 4094159 36.000000 2 2 2 NCBI RefSeq GCF_000017425.1-RS_2025_12_11 2025-12-11 4264 3850 150 17434157 GCF_000017445.4 PRJNA224116 SAMN02603768 na na 452659 783 Rickettsia rickettsii str. Iowa strain=Iowa na latest Complete Genome Minor Full 2015-02-03 ASM1744v3 Rocky Mountain Laboratories GCA_000017445.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/445/GCF_000017445.4_ASM1744v3/ na assembly from type material na haploid bacteria 1268201 1268201 32.500000 1 1 1 NCBI RefSeq GCF_000017445.4-RS_2026_01_08 2026-01-08 1444 1306 41 18025092 GCF_000017465.2 PRJNA224116 SAMN02604055 na na 360105 200 Campylobacter curvus 525.92 strain=525.92 na latest Complete Genome Major Full 2016-09-09 ASM1746v2 TIGR GCA_000017465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/465/GCF_000017465.2_ASM1746v2/ na na na haploid bacteria 1971270 1971270 44.500000 1 1 1 NCBI RefSeq GCF_000017465.2-RS_2025_03_05 2025-03-05 2003 1919 59 na GCF_000017505.1 PRJNA224116 SAMN02598401 na na 404589 404589 Anaeromyxobacter sp. Fw109-5 strain=Fw109-5 na latest Complete Genome Major Full 2007-07-17 ASM1750v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000017505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/505/GCF_000017505.1_ASM1750v1/ na na na haploid bacteria 5277990 5277990 73.500000 1 1 1 NCBI RefSeq GCF_000017505.1-RS_2024_08_13 2024-08-13 4665 4551 62 25614562 GCF_000017545.1 PRJNA224116 SAMN00623043 na reference genome 381764 2424 Fervidobacterium nodosum Rt17-B1 strain=Rt17-B1 na latest Complete Genome Major Full 2007-07-30 ASM1754v1 US DOE Joint Genome Institute GCA_000017545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/545/GCF_000017545.1_ASM1754v1/ na assembly from type material na haploid bacteria 1948941 1948941 35.000000 1 1 1 NCBI RefSeq GCF_000017545.1-RS_2026_03_27 2026-03-27 1877 1806 58 19307556 GCF_000017565.1 PRJNA224116 SAMN00623055 na reference genome 402881 256618 Parvibaculum lavamentivorans DS-1 strain=DS-1 na latest Complete Genome Major Full 2007-07-30 ASM1756v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000017565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/565/GCF_000017565.1_ASM1756v1/ na assembly from type material na haploid bacteria 3914745 3914745 62.500000 1 1 1 NCBI RefSeq GCF_000017565.1-RS_2026_05_01 2026-05-01 3741 3675 52 10788359;12571015;14962144;15240283;15388700;16075201;17557839;22675581 GCF_000017585.1 PRJNA224116 SAMN02603439 na reference genome 360107 76517 Campylobacter hominis ATCC BAA-381 strain=ATCC BAA-381 na latest Complete Genome Major Full 2007-07-25 ASM1758v1 J. Craig Venter Institute GCA_000017585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/585/GCF_000017585.1_ASM1758v1/ na assembly from type material na haploid bacteria 1714951 1714951 31.500000 2 2 2 NCBI RefSeq GCF_000017585.1-RS_2025_12_13 2025-12-13 1689 1606 56 na GCF_000017605.1 PRJNA224116 SAMN02603617 na na 355278 172 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' strain=Patoc 1 (Ames) na latest Complete Genome Major Full 2008-02-13 ASM1760v1 Monash University GCA_000017605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/605/GCF_000017605.1_ASM1760v1/ na na na haploid bacteria 3956089 3956089 39.000000 3 3 3 NCBI RefSeq GCF_000017605.1-RS_2026_03_31 2026-03-31 3739 3667 43 18270594 GCF_000017625.1 PRJNA224116 SAMN02598409 na reference genome 456442 358766 Methanoregula boonei 6A8 strain=6A8 na latest Complete Genome Major Full 2007-07-26 ASM1762v1 US DOE Joint Genome Institute GCA_000017625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/625/GCF_000017625.1_ASM1762v1/ na assembly from type material na haploid archaea 2542943 2542943 54.500000 1 1 1 NCBI RefSeq GCF_000017625.1-RS_2025_11_21 2025-11-21 2555 2493 54 na GCF_000017665.1 PRJNA224116 SAMN02603913 na na 290339 28141 Cronobacter sakazakii ATCC BAA-894 strain=ATCC BAA-894 na latest Complete Genome Major Full 2007-08-28 ASM1766v1 The Enterobacter sakazakii Genome Sequencing Project GCA_000017665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/665/GCF_000017665.1_ASM1766v1/ na na na haploid bacteria 4530777 4530777 56.500000 3 3 3 NCBI RefSeq GCF_000017665.1-RS_2026_04_01 2026-04-01 4318 4145 113 20221447 GCF_000017685.1 PRJNA224116 SAMN02603347 na reference genome 456481 172 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' strain=Patoc 1 (Paris) na latest Complete Genome Major Full 2008-02-13 ASM1768v1 Institut Pasteur GCA_000017685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/685/GCF_000017685.1_ASM1768v1/ na assembly from type material na haploid bacteria 3951448 3951448 39.000000 3 3 3 NCBI RefSeq GCF_000017685.1-RS_2026_03_30 2026-03-30 3728 3662 43 18270594 GCF_000017705.1 PRJNA224116 SAMN02603960 na na 2902295 680 Vibrio campbellii ATCC BAA-1116 strain=ATCC BAA-1116; BB120 na latest Complete Genome Major Full 2007-08-28 ASM1770v1 The Vibrio harveyi Genome Sequencing Project GCA_000017705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/705/GCF_000017705.1_ASM1770v1/ na na na haploid bacteria 6058377 6058377 45.500000 3 3 3 NCBI RefSeq GCF_000017705.1-RS_2026_02_10 2026-02-10 5631 5146 157 na GCF_000017725.2 PRJNA224116 SAMN02604054 na na 360104 199 Campylobacter concisus 13826 strain=13826 na latest Complete Genome Major Full 2016-09-09 ASM1772v2 TIGR GCA_000017725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/725/GCF_000017725.2_ASM1772v2/ na na na haploid bacteria 2099413 2099413 39.500000 3 3 3 NCBI RefSeq GCF_000017725.2-RS_2025_03_23 2025-03-23 2150 2062 59 na GCF_000017745.1 PRJNA224116 SAMN02604038 na na 331111 562 Escherichia coli O139:H28 str. E24377A strain=E24377A na latest Complete Genome Major Full 2007-09-11 ASM1774v1 TIGR GCA_000017745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/745/GCF_000017745.1_ASM1774v1/ na na na haploid bacteria 5249288 5249288 50.500000 7 7 7 NCBI RefSeq GCF_000017745.1-RS_2025_06_13 2025-06-13 5203 4800 123 na GCF_000017765.1 PRJNA224116 SAMN02604037 na na 331112 562 Escherichia coli HS strain=HS na latest Complete Genome Major Full 2007-09-10 ASM1776v1 TIGR GCA_000017765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/765/GCF_000017765.1_ASM1776v1/ na na na haploid bacteria 4643538 4643538 51.000000 1 1 1 NCBI RefSeq GCF_000017765.1-RS_2025_06_09 2025-06-09 4493 4208 120 18676672 GCF_000017785.1 PRJNA224116 SAMN02603037 na na 458234 263 Francisella tularensis subsp. holarctica FTNF002-00 strain=FTNF002-00 na latest Complete Genome Major Full 2007-08-23 ASM1778v1 BioHealthBase GCA_000017785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/785/GCF_000017785.1_ASM1778v1/ na na na haploid bacteria 1890909 1890909 32.000000 1 1 1 NCBI RefSeq GCF_000017785.1-RS_2026_06_13 2026-06-13 1972 1627 52 19756146 GCF_000017805.1 PRJNA224116 SAMN02598306 na reference genome 383372 120962 Roseiflexus castenholzii DSM 13941 strain=DSM 13941 na latest Complete Genome Major Full 2007-08-23 ASM1780v1 US DOE Joint Genome Institute GCA_000017805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/805/GCF_000017805.1_ASM1780v1/ na assembly from type material na haploid bacteria 5723298 5723298 60.500000 1 1 1 NCBI RefSeq GCF_000017805.1-RS_2025_12_13 2025-12-13 4642 4556 57 na GCF_000017825.1 PRJNA224116 SAMN00000318 na na 455434 160 Treponema pallidum subsp. pallidum SS14 strain=SS14 na latest Chromosome Major Full 2008-05-22 ASM1782v1 Baylor College of Medicine GCA_000017825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/825/GCF_000017825.1_ASM1782v1/ na na na haploid bacteria 1139457 1139037 53.000000 1 1 8 NCBI RefSeq GCF_000017825.1-RS_2025_07_04 2025-07-04 1068 991 54 18482458 GCF_000017845.1 PRJNA224116 SAMN02604312 na reference genome 43989 2546360 Crocosphaera subtropica ATCC 51142 strain=ATCC 51142 na latest Complete Genome Major Full 2008-04-01 ASM1784v1 Washington University (WashU) GCA_000017845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/845/GCF_000017845.1_ASM1784v1/ na assembly from type material na haploid bacteria 5460377 5460377 38.000000 6 6 6 NCBI RefSeq GCF_000017845.1-RS_2026_04_15 2026-04-15 5108 4963 53 18812508 GCF_000017865.1 PRJNA224116 SAMN02598331 na reference genome 416591 177758 Pseudothermotoga lettingae TMO strain=TMO na latest Complete Genome Major Full 2007-09-18 ASM1786v1 US DOE Joint Genome Institute GCA_000017865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/865/GCF_000017865.1_ASM1786v1/ na assembly from type material na haploid bacteria 2135342 2135342 38.500000 1 1 1 NCBI RefSeq GCF_000017865.1-RS_2025_12_09 2025-12-09 2141 2082 52 19307556 GCF_000017885.4 PRJNA224116 SAMN00253833 na reference genome 315750 1408 Bacillus pumilus SAFR-032 strain=SAFR-032 na latest Complete Genome Major Full 2016-03-15 ASM1788v4 Human Genome Sequencing Center GCA_000017885.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/885/GCF_000017885.4_ASM1788v4/ na na na haploid bacteria 3704641 3704641 41.500000 1 1 1 NCBI RefSeq GCF_000017885.4-RS_2026_03_30 2026-03-30 3775 3615 98 17895969;23799069;23812891;27351589;29884123 GCF_000017905.1 PRJNA224116 SAMN02603008 na na 407148 197 Campylobacter jejuni subsp. jejuni 81116 strain=81116; NCTC 11828 na latest Complete Genome Major Full 2007-09-20 ASM1790v1 BBSRC Institute of Food Research GCA_000017905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/905/GCF_000017905.1_ASM1790v1/ na na na haploid bacteria 1628115 1628115 30.500000 1 1 1 NCBI RefSeq GCF_000017905.1-RS_2025_06_05 2025-06-05 1676 1575 56 17873037 GCF_000017945.1 PRJNA224116 SAMN02598324 na reference genome 453591 160233 Ignicoccus hospitalis KIN4/I strain=KIN4/I na latest Complete Genome Major Full 2007-08-29 ASM1794v1 US DOE Joint Genome Institute GCA_000017945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/945/GCF_000017945.1_ASM1794v1/ na assembly from type material na haploid archaea 1297538 1297538 56.500000 1 1 1 NCBI RefSeq GCF_000017945.1-RS_2026_03_30 2026-03-30 1537 1472 53 19000309 GCF_000017965.1 PRJNA224116 SAMN02604328 na na 444177 1421 Lysinibacillus sphaericus C3-41 strain=C3-41 na latest Complete Genome Major Full 2008-02-27 ASM1796v1 Wuhan Institute of Virology, Chinese Academy of Sciences GCA_000017965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/965/GCF_000017965.1_ASM1796v1/ na na na haploid bacteria 4817463 4817463 37.000000 2 2 2 NCBI RefSeq GCF_000017965.1-RS_2025_07_19 2025-07-19 4832 4441 121 18296527 GCF_000017985.1 PRJNA224116 SAMN02603421 na na 413997 562 Escherichia coli B str. REL606 strain=REL606 na latest Complete Genome Major Full 2009-07-15 ASM1798v1 International E. coli B Consortium GCA_000017985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/017/985/GCF_000017985.1_ASM1798v1/ na na na haploid bacteria 4629812 4629812 51.000000 1 1 1 NCBI RefSeq GCF_000017985.1-RS_2025_06_13 2025-06-13 4507 4204 116 na GCF_000018005.1 PRJNA224116 SAMN02598325 na na 298653 298653 Parafrankia sp. EAN1pec strain=EAN1.pec na latest Complete Genome Major Full 2007-10-10 ASM1800v1 US DOE Joint Genome Institute GCA_000018005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/005/GCF_000018005.1_ASM1800v1/ na na na haploid bacteria 8982042 8982042 71.000000 1 1 1 NCBI RefSeq GCF_000018005.1-RS_2024_05_24 2024-05-24 7635 7159 60 na GCF_000018025.1 PRJNA224116 SAMN02598412 na reference genome 425104 271097 Shewanella sediminis HAW-EB3 strain=HAW-EB3 na latest Complete Genome Major Full 2007-09-18 ASM1802v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/025/GCF_000018025.1_ASM1802v1/ na assembly from type material na haploid bacteria 5517674 5517674 46.000000 1 1 1 NCBI RefSeq GCF_000018025.1-RS_2025_08_18 2025-08-18 4745 4555 168 na GCF_000018045.1 PRJNA224116 SAMN02603912 na reference genome 290338 545 Citrobacter koseri ATCC BAA-895 strain=ATCC BAA-895 na latest Complete Genome Major Full 2007-09-11 ASM1804v1 The Citrobacter koseri Genome Sequencing Project GCA_000018045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/045/GCF_000018045.1_ASM1804v1/ na na na haploid bacteria 4735357 4735357 54.000000 3 3 3 NCBI RefSeq GCF_000018045.1-RS_2026_04_23 2026-04-23 4430 4265 111 na GCF_000018065.1 PRJNA224116 SAMN02598410 na na 93060 1219 Prochlorococcus marinus str. MIT 9215 strain=MIT 9215 na latest Complete Genome Major Full 2007-09-20 ASM1806v1 US DOE Joint Genome Institute GCA_000018065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/065/GCF_000018065.1_ASM1806v1/ na na na haploid bacteria 1738790 1738790 31.000000 1 1 1 NCBI RefSeq GCF_000018065.1-RS_2025_05_22 2025-05-22 1984 1930 46 18159947 GCF_000018105.1 PRJNA224116 SAMN02604308 na reference genome 329726 155978 Acaryochloris marina MBIC11017 strain=MBIC11017 na latest Complete Genome Major Full 2007-10-16 ASM1810v1 Washington University GCA_000018105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/105/GCF_000018105.1_ASM1810v1/ na assembly from type material na haploid bacteria 8361599 8361599 47.000000 10 10 10 NCBI RefSeq GCF_000018105.1-RS_2025_11_24 2025-11-24 7652 7301 84 18252824 GCF_000018145.1 PRJNA224116 SAMN02598387 na reference genome 398580 215813 Dinoroseobacter shibae DFL 12 = DSM 16493 strain=DFL 12 na latest Complete Genome Major Full 2007-10-05 ASM1814v1 US DOE Joint Genome Institute GCA_000018145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/145/GCF_000018145.1_ASM1814v1/ na assembly from type material na haploid bacteria 4417868 4417868 65.500000 6 6 6 NCBI RefSeq GCF_000018145.1-RS_2026_05_01 2026-05-01 4330 4220 54 na GCF_000018185.1 PRJNA224116 SAMN02603644 na na 423211 1307 Streptococcus suis GZ1 strain=GZ1 na latest Complete Genome Major Full 2010-03-30 ASM1818v1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000018185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/185/GCF_000018185.1_ASM1818v1/ na na na haploid bacteria 2038034 2038034 41.500000 1 1 1 NCBI RefSeq GCF_000018185.1-RS_2026_01_13 2026-01-13 1994 1824 65 19016627 GCF_000018205.1 PRJNA224116 SAMN02604084 na reference genome 293614 786 Rickettsia akari str. Hartford strain=Hartford na latest Complete Genome Major Full 2007-10-02 ASM1820v1 Univ. Iowa GCA_000018205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/205/GCF_000018205.1_ASM1820v1/ na na na haploid bacteria 1231060 1231060 32.500000 1 1 1 NCBI RefSeq GCF_000018205.1-RS_2026_01_08 2026-01-08 1296 1120 40 na GCF_000018225.1 PRJNA224116 SAMN02603386 na reference genome 392021 783 Rickettsia rickettsii str. 'Sheila Smith' strain=Sheila Smith na latest Complete Genome Major Full 2007-10-02 ASM1822v1 Institute for Systems Biology GCA_000018225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/225/GCF_000018225.1_ASM1822v1/ na na na haploid bacteria 1257710 1257710 32.500000 1 1 1 NCBI RefSeq GCF_000018225.1-RS_2026_01_08 2026-01-08 1433 1290 41 na GCF_000018245.1 PRJNA224116 SAMN02604191 na na 391896 33990 Rickettsia bellii OSU 85-389 strain=OSU 85-389 na latest Complete Genome Major Full 2007-10-02 ASM1824v1 University of Iowa GCA_000018245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/245/GCF_000018245.1_ASM1824v1/ na na na haploid bacteria 1528980 1528980 31.500000 1 1 1 NCBI RefSeq GCF_000018245.1-RS_2026_01_08 2026-01-08 1565 1415 41 na GCF_000018285.1 PRJNA224116 SAMN02598386 na reference genome 398579 70864 Shewanella pealeana ATCC 700345 strain=ATCC 700345 na latest Complete Genome Major Full 2007-10-04 ASM1828v1 US DOE Joint Genome Institute GCA_000018285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/285/GCF_000018285.1_ASM1828v1/ na assembly from type material na haploid bacteria 5174581 5174581 44.500000 1 1 1 NCBI RefSeq GCF_000018285.1-RS_2025_08_18 2025-08-18 4466 4249 185 na GCF_000018305.1 PRJNA224116 SAMN00623034 na reference genome 397948 76887 Caldivirga maquilingensis IC-167 strain=IC-167 na latest Complete Genome Major Full 2007-10-05 ASM1830v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/305/GCF_000018305.1_ASM1830v1/ na assembly from type material na haploid archaea 2077567 2077567 43.000000 1 1 1 NCBI RefSeq GCF_000018305.1-RS_2026_03_30 2026-03-30 2087 2031 45 na GCF_000018325.1 PRJNA224116 SAMN00623039 na reference genome 350688 461876 Alkaliphilus oremlandii OhILAs strain=OhILAs na latest Complete Genome Major Full 2007-10-11 ASM1832v1 US DOE Joint Genome Institute GCA_000018325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/325/GCF_000018325.1_ASM1832v1/ na assembly from type material na haploid bacteria 3123558 3123558 36.500000 1 1 1 NCBI RefSeq GCF_000018325.1-RS_2025_12_13 2025-12-13 3095 2965 117 na GCF_000018345.1 PRJNA224116 SAMN02604327 na na 216594 1781 Mycobacterium marinum M strain=M na latest Complete Genome Major Full 2008-04-15 ASM1834v1 Wellcome Trust Sanger Institute GCA_000018345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/345/GCF_000018345.1_ASM1834v1/ na na na haploid bacteria 6660144 6660144 65.500000 2 2 2 NCBI RefSeq GCF_000018345.1-RS_2025_12_16 2025-12-16 5591 5413 52 18403782 GCF_000018365.1 PRJNA224116 SAMN02603476 na reference genome 523850 342948 Thermococcus onnurineus NA1 strain=NA1 na latest Complete Genome Major Full 2008-11-06 ASM1836v1 Korea Ocean Research & Development Institute GCA_000018365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/365/GCF_000018365.1_ASM1836v1/ na assembly from type material na haploid archaea 1847607 1847607 51.500000 1 1 1 NCBI RefSeq GCF_000018365.1-RS_2025_11_21 2025-11-21 2057 1984 52 18790866 GCF_000018385.1 PRJNA224116 SAMN02603245 na na 476213 28901 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 strain=RKS4594 na latest Complete Genome Major Full 2009-03-03 ASM1838v1 Genomics Research Center of Harbin Medical GCA_000018385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/385/GCF_000018385.1_ASM1838v1/ na na na haploid bacteria 4888494 4888494 52.000000 2 2 2 NCBI RefSeq GCF_000018385.1-RS_2025_05_22 2025-05-22 4807 4391 116 19229335 GCF_000018405.1 PRJNA224116 SAMN00623035 na reference genome 96561 181663 Desulfosudis oleivorans Hxd3 strain=Hxd3 na latest Complete Genome Major Full 2007-10-19 ASM1840v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/405/GCF_000018405.1_ASM1840v1/ na assembly from type material na haploid bacteria 3944167 3944167 56.000000 1 1 1 NCBI RefSeq GCF_000018405.1-RS_2025_12_13 2025-12-13 3385 3326 54 na GCF_000018425.1 PRJNA224116 SAMN02598442 na na 477974 471827 Candidatus Desulforudis audaxviator MP104C na MP104C latest Complete Genome Major Full 2008-03-06 ASM1842v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/425/GCF_000018425.1_ASM1842v1/ na assembly from type material na haploid bacteria 2349476 2349476 61.000000 1 1 1 NCBI RefSeq GCF_000018425.1-RS_2026_02_24 2026-02-24 2365 2278 56 18845759 GCF_000018445.1 PRJNA224116 SAMN02603140 na na 405416 470 Acinetobacter baumannii ACICU strain=ACICU na latest Complete Genome Major Full 2008-04-15 ASM1844v1 CNR - National Research Council GCA_000018445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/445/GCF_000018445.1_ASM1844v1/ na na na haploid bacteria 3996761 3996761 39.000000 3 3 3 NCBI RefSeq GCF_000018445.1-RS_2026_01_21 2026-01-21 3838 3603 86 18411315 GCF_000018465.1 PRJNA224116 SAMN00000032 na reference genome 436308 338192 Nitrosopumilus maritimus SCM1 strain=SCM1 na latest Complete Genome Major Full 2007-11-15 ASM1846v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/465/GCF_000018465.1_ASM1846v1/ na assembly from type material na haploid archaea 1645259 1645259 34.000000 1 1 1 NCBI RefSeq GCF_000018465.1-RS_2026_03_30 2026-03-30 1974 1926 48 20421470 GCF_000018505.1 PRJNA224116 SAMN00623032 na na 395019 87883 Burkholderia multivorans ATCC 17616 strain=ATCC 17616 na latest Complete Genome Major Full 2007-11-15 ASM1850v1 US DOE Joint Genome Institute GCA_000018505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/505/GCF_000018505.1_ASM1850v1/ na na na haploid bacteria 7008622 7008622 66.500000 4 4 4 NCBI RefSeq GCF_000018505.1-RS_2026_02_06 2026-02-06 6510 6301 85 na GCF_000018525.1 PRJNA224116 SAMN02604295 na reference genome 483179 36855 Brucella canis ATCC 23365 strain=ATCC 23365 na latest Complete Genome Major Full 2007-11-29 ASM1852v1 Virginia Bioinformatics Institute GCA_000018525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/525/GCF_000018525.1_ASM1852v1/ na assembly from type material na haploid bacteria 3312769 3312769 57.000000 2 2 2 NCBI RefSeq GCF_000018525.1-RS_2025_08_07 2025-08-07 3221 3014 68 na GCF_000018545.1 PRJNA224116 SAMN02603283 na na 394 380 Sinorhizobium fredii NGR234 strain=NGR234 na latest Complete Genome Major Full 2009-04-22 ASM1854v1 Goettingen Genomics Laboratory GCA_000018545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/545/GCF_000018545.1_ASM1854v1/ na na na haploid bacteria 6891900 6891900 62.500000 3 3 3 NCBI RefSeq GCF_000018545.1-RS_2025_06_12 2025-06-12 6537 6218 68 9163424;19376903 GCF_000018585.1 PRJNA224116 SAMN00622972 na na 93059 1219 Prochlorococcus marinus str. MIT 9211 strain=MIT 9211 na latest Chromosome Major Full 2007-11-13 ASM1858v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000018585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/585/GCF_000018585.1_ASM1858v1/ na na na haploid bacteria 1688963 1688863 38.000000 1 1 2 NCBI RefSeq GCF_000018585.1-RS_2025_05_21 2025-05-21 1854 1800 46 18159947 GCF_000018605.1 PRJNA224116 SAMN00623056 na reference genome 403833 69499 Petrotoga mobilis SJ95 strain=SJ95 na latest Complete Genome Major Full 2007-11-16 ASM1860v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/605/GCF_000018605.1_ASM1860v1/ na assembly from type material na haploid bacteria 2169548 2169548 34.000000 1 1 1 NCBI RefSeq GCF_000018605.1-RS_2025_12_11 2025-12-11 2069 1991 57 na GCF_000018665.1 PRJNA224116 SAMN00623041 na reference genome 398578 80866 Delftia acidovorans SPH-1 strain=SPH-1 na latest Complete Genome Major Full 2007-11-16 ASM1866v1 US DOE Joint Genome Institute GCA_000018665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/665/GCF_000018665.1_ASM1866v1/ na na na haploid bacteria 6767514 6767514 66.500000 1 1 1 NCBI RefSeq GCF_000018665.1-RS_2025_11_23 2025-11-23 6277 6138 98 15240283 GCF_000018685.1 PRJNA224116 SAMN02598360 na reference genome 357809 66219 Lachnoclostridium phytofermentans ISDg strain=ISDg na latest Complete Genome Major Full 2007-11-19 ASM1868v1 US DOE Joint Genome Institute GCA_000018685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/685/GCF_000018685.1_ASM1868v1/ na assembly from type material na haploid bacteria 4847594 4847594 35.500000 1 1 1 NCBI RefSeq GCF_000018685.1-RS_2025_12_13 2025-12-13 4134 4019 89 na GCF_000018705.1 PRJNA224116 SAMN02603951 na na 1016998 28901 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 strain=SPB7 SGSC4150; SPB7 latest Complete Genome Major Full 2007-11-30 ASM1870v1 The Salmonella enterica serovar Paratyphi B Genome Sequencing Project GCA_000018705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/705/GCF_000018705.1_ASM1870v1/ na na na haploid bacteria 4858887 4858887 52.000000 1 1 1 NCBI RefSeq GCF_000018705.1-RS_2025_06_11 2025-06-11 4761 4507 122 na GCF_000018725.1 PRJNA224116 SAMN02604294 na na 430066 235 Brucella abortus S19 strain=S19 na latest Complete Genome Major Full 2008-05-22 ASM1872v1 Virginia Bioinformatics Institute GCA_000018725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/725/GCF_000018725.1_ASM1872v1/ na na na haploid bacteria 3283936 3283936 57.000000 2 2 2 NCBI RefSeq GCF_000018725.1-RS_2026_04_07 2026-04-07 3226 2972 68 18478107 GCF_000018745.1 PRJNA224116 SAMN02604053 na na 360115 777 Coxiella burnetii RSA 331 strain=RSA 331 na latest Complete Genome Major Full 2007-12-05 ASM1874v1 TIGR GCA_000018745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/745/GCF_000018745.1_ASM1874v1/ na na na haploid bacteria 2053744 2053744 42.500000 2 2 2 NCBI RefSeq GCF_000018745.1-RS_2025_07_01 2025-07-01 2235 2029 50 na GCF_000018765.1 PRJNA224116 SAMN00623061 na na 399599 62322 Shewanella baltica OS195 strain=OS195 na latest Complete Genome Major Full 2007-11-21 ASM1876v1 US DOE Joint Genome Institute GCA_000018765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/765/GCF_000018765.1_ASM1876v1/ na na na haploid bacteria 5547544 5547544 46.000000 4 4 4 NCBI RefSeq GCF_000018765.1-RS_2025_12_08 2025-12-08 4851 4649 143 27777983 GCF_000018785.1 PRJNA224116 SAMN02603756 na reference genome 441768 2148 Acholeplasma laidlawii PG-8A strain=PG-8A na latest Complete Genome Major Full 2007-12-07 ASM1878v1 Research Institute for Physico-Chemical Medicine GCA_000018785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/785/GCF_000018785.1_ASM1878v1/ na assembly from type material na haploid bacteria 1496992 1496992 32.000000 1 1 1 NCBI RefSeq GCF_000018785.1-RS_2026_03_27 2026-03-27 1440 1385 44 21784942 GCF_000018805.1 PRJNA224116 SAMN02604042 na na 349746 632 Yersinia pestis Angola strain=Angola na latest Complete Genome Major Full 2007-12-12 ASM1880v1 TIGR GCA_000018805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/805/GCF_000018805.1_ASM1880v1/ na na na haploid bacteria 4687014 4687014 47.500000 3 3 3 NCBI RefSeq GCF_000018805.1-RS_2026_03_27 2026-03-27 4343 3895 102 20061468 GCF_000018825.1 PRJNA224116 SAMN00623031 na na 315730 1405 Bacillus mycoides KBAB4 strain=KBAB4 na latest Complete Genome Major Full 2007-12-21 ASM1882v1 US DOE Joint Genome Institute GCA_000018825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/825/GCF_000018825.1_ASM1882v1/ na na na haploid bacteria 5872743 5872743 35.500000 5 5 5 NCBI RefSeq GCF_000018825.1-RS_2026_03_27 2026-03-27 6048 5675 155 17434157 GCF_000018845.1 PRJNA224116 SAMN00000030 na na 419610 408 Methylorubrum extorquens PA1 strain=PA1 na latest Complete Genome Major Full 2007-12-20 ASM1884v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000018845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/845/GCF_000018845.1_ASM1884v1/ na na na haploid bacteria 5471154 5471154 68.000000 1 1 1 NCBI RefSeq GCF_000018845.1-RS_2026_04_29 2026-04-29 5097 4907 77 22887658 GCF_000018865.1 PRJNA224116 SAMN02598539 na reference genome 324602 1108 Chloroflexus aurantiacus J-10-fl strain=J-10-fl na latest Complete Genome Major Full 2007-12-20 ASM1886v1 US DOE Joint Genome Institute GCA_000018865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/865/GCF_000018865.1_ASM1886v1/ na assembly from type material na haploid bacteria 5258541 5258541 56.500000 1 1 1 NCBI RefSeq GCF_000018865.1-RS_2026_04_14 2026-04-14 4137 4038 60 na GCF_000018885.1 PRJNA224116 SAMN02603684 na reference genome 288705 1646 Renibacterium salmoninarum ATCC 33209 strain=ATCC 33209 na latest Complete Genome Major Full 2007-12-18 ASM1888v1 Northwest Fisheries Science Center, NOAA Fisheries Service GCA_000018885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/885/GCF_000018885.1_ASM1888v1/ na assembly from type material na haploid bacteria 3155250 3155250 56.500000 1 1 1 NCBI RefSeq GCF_000018885.1-RS_2026_04_26 2026-04-26 3325 2931 54 na GCF_000018905.1 PRJNA224116 SAMN02604298 na na 470137 29461 Brucella suis ATCC 23445 strain=ATCC 23445 na latest Complete Genome Major Full 2007-12-20 ASM1890v1 Virginia Bioinformatics Institute (VBI) GCA_000018905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/905/GCF_000018905.1_ASM1890v1/ na na na haploid bacteria 3324607 3324607 57.000000 2 2 2 NCBI RefSeq GCF_000018905.1-RS_2025_08_08 2025-08-08 3249 3004 67 na GCF_000018945.1 PRJNA224116 SAMN02603251 na reference genome 309803 2337 Thermotoga neapolitana DSM 4359 strain=DSM 4359 na latest Complete Genome Major Full 2009-01-27 ASM1894v1 Genotech Corp. GCA_000018945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/945/GCF_000018945.1_ASM1894v1/ na assembly from type material na haploid bacteria 1884562 1884562 47.000000 1 1 1 NCBI RefSeq GCF_000018945.1-RS_2026_04_26 2026-04-26 1963 1881 54 19129632 GCF_000018965.1 PRJNA224116 SAMN02603446 na na 488221 1313 Streptococcus pneumoniae 70585 strain=70585 na latest Complete Genome Major Full 2009-03-27 ASM1896v1 J. Craig Venter Institute GCA_000018965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/965/GCF_000018965.1_ASM1896v1/ na na na haploid bacteria 2184682 2184682 39.500000 1 1 1 NCBI RefSeq GCF_000018965.1-RS_2026_02_04 2026-02-04 2275 2015 73 na GCF_000018985.1 PRJNA224116 SAMN02603444 na na 488222 1313 Streptococcus pneumoniae JJA strain=JJA na latest Complete Genome Major Full 2009-03-27 ASM1898v1 J. Craig Venter Institute GCA_000018985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/018/985/GCF_000018985.1_ASM1898v1/ na na na haploid bacteria 2120234 2120234 39.500000 1 1 1 NCBI RefSeq GCF_000018985.1-RS_2025_04_04 2025-04-04 2187 1958 74 na GCF_000019005.1 PRJNA224116 SAMN02603445 na na 488223 1313 Streptococcus pneumoniae P1031 strain=P1031 na latest Complete Genome Major Full 2009-03-27 ASM1900v1 J. Craig Venter Institute GCA_000019005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/005/GCF_000019005.1_ASM1900v1/ na na na haploid bacteria 2111882 2111882 39.500000 1 1 1 NCBI RefSeq GCF_000019005.1-RS_2025_12_23 2025-12-23 2206 1958 73 na GCF_000019025.1 PRJNA224116 SAMN02603443 na na 487213 1313 Streptococcus pneumoniae Taiwan19F-14 strain=Taiwan19F-14 na latest Complete Genome Major Full 2009-03-27 ASM1902v1 J. Craig Venter Institute GCA_000019025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/025/GCF_000019025.1_ASM1902v1/ na na na haploid bacteria 2112148 2112148 40.000000 1 1 1 NCBI RefSeq GCF_000019025.1-RS_2025_12_21 2025-12-21 2177 1938 73 na GCF_000019045.1 PRJNA224116 SAMN02604185 na reference genome 491915 33934 Anoxybacillus flavithermus WK1 strain=WK1 na latest Complete Genome Major Full 2008-11-13 ASM1904v1 University of Hawaii at Manoa GCA_000019045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/045/GCF_000019045.1_ASM1904v1/ na na na haploid bacteria 2846746 2846746 42.000000 1 1 1 NCBI RefSeq GCF_000019045.1-RS_2026_04_23 2026-04-23 3038 2833 104 19014707 GCF_000019065.1 PRJNA224116 SAMN00623066 na na 399726 399726 Thermoanaerobacter sp. X514 strain=X514 na latest Complete Genome Major Full 2008-02-05 ASM1906v1 US DOE Joint Genome Institute GCA_000019065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/065/GCF_000019065.1_ASM1906v1/ na na na haploid bacteria 2457259 2457259 34.500000 1 1 1 NCBI RefSeq GCF_000019065.1-RS_2024_08_13 2024-08-13 2511 2350 71 na GCF_000019085.1 PRJNA224116 SAMN02598314 na reference genome 340099 496866 Thermoanaerobacter pseudethanolicus ATCC 33223 strain=ATCC 33223; 39E na latest Complete Genome Major Full 2008-02-05 ASM1908v1 US DOE Joint Genome Institute GCA_000019085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/085/GCF_000019085.1_ASM1908v1/ na assembly from type material na haploid bacteria 2362816 2362816 34.500000 1 1 1 NCBI RefSeq GCF_000019085.1-RS_2026_04_23 2026-04-23 2411 2265 73 na GCF_000019125.1 PRJNA224116 SAMN00623059 na na 76869 303 Pseudomonas putida GB-1 strain=GB-1 na latest Complete Genome Major Full 2008-02-05 ASM1912v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/125/GCF_000019125.1_ASM1912v1/ na na na haploid bacteria 6078430 6078430 62.000000 1 1 1 NCBI RefSeq GCF_000019125.1-RS_2025_01_15 2025-01-15 5582 5407 101 na GCF_000019165.1 PRJNA224116 SAMN02602985 na reference genome 498761 35701 Heliomicrobium modesticaldum Ice1 strain=Ice1; ATCC 51547 na latest Complete Genome Major Full 2008-04-01 ASM1916v1 Arizona State University GCA_000019165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/165/GCF_000019165.1_ASM1916v1/ na assembly from type material na haploid bacteria 3075407 3075407 57.000000 1 1 1 NCBI RefSeq GCF_000019165.1-RS_2026_03_03 2026-03-03 2877 2695 143 18441057 GCF_000019185.1 PRJNA224116 SAMN02598431 na reference genome 458817 271098 Shewanella halifaxensis HAW-EB4 strain=HAW-EB4 na latest Complete Genome Major Full 2008-02-07 ASM1918v1 US DOE Joint Genome Institute GCA_000019185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/185/GCF_000019185.1_ASM1918v1/ na assembly from type material na haploid bacteria 5226917 5226917 44.500000 1 1 1 NCBI RefSeq GCF_000019185.1-RS_2025_08_18 2025-08-18 4520 4334 160 na GCF_000019205.1 PRJNA224116 SAMN02604025 na na 306263 201 Campylobacter lari RM2100 strain=RM2100; ATCC BAA-1060D na latest Complete Genome Major Full 2009-02-05 ASM1920v1 TIGR GCA_000019205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/205/GCF_000019205.1_ASM1920v1/ na na na haploid bacteria 1571661 1571661 29.500000 2 2 2 NCBI RefSeq GCF_000019205.1-RS_2025_12_05 2025-12-05 1643 1556 58 18713059;25381664 GCF_000019225.1 PRJNA224116 SAMN02603448 na reference genome 498211 155077 Cellvibrio japonicus Ueda107 strain=Ueda107 na latest Complete Genome Major Full 2008-06-19 ASM1922v1 J. Craig Venter Institute GCA_000019225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/225/GCF_000019225.1_ASM1922v1/ na assembly from type material na haploid bacteria 4576573 4576573 52.000000 1 1 1 NCBI RefSeq GCF_000019225.1-RS_2026_03_27 2026-03-27 3704 3623 59 18556790 GCF_000019265.1 PRJNA224116 SAMN02603442 na na 487214 1313 Streptococcus pneumoniae Hungary19A-6 strain=Hungary19A-6 na latest Complete Genome Major Full 2008-02-27 ASM1926v1 J. Craig Venter Institute GCA_000019265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/265/GCF_000019265.1_ASM1926v1/ na na na haploid bacteria 2245615 2245615 39.500000 1 1 1 NCBI RefSeq GCF_000019265.1-RS_2025_04_24 2025-04-24 2319 2086 73 na GCF_000019305.1 PRJNA224116 SAMN02603535 na na 498213 1491 Clostridium botulinum B1 str. Okra strain=Okra na latest Complete Genome Major Full 2008-02-28 ASM1930v1 Los Alamos National Laboratory GCA_000019305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/305/GCF_000019305.1_ASM1930v1/ na na na haploid bacteria 4107013 4107013 28.000000 2 2 2 NCBI RefSeq GCF_000019305.1-RS_2026_04_14 2026-04-14 3919 3744 113 18060065 GCF_000019325.1 PRJNA224116 SAMN02598402 na na 405440 2371 Xylella fastidiosa M12 strain=M12 na latest Complete Genome Major Full 2008-02-19 ASM1932v1 US DOE Joint Genome Institute GCA_000019325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/325/GCF_000019325.1_ASM1932v1/ na na na haploid bacteria 2475130 2475130 52.000000 1 1 1 NCBI RefSeq GCF_000019325.1-RS_2026_05_07 2026-05-07 2212 2073 58 20601474 GCF_000019345.1 PRJNA224116 SAMN02604063 na reference genome 505682 134821 Ureaplasma parvum serovar 3 str. ATCC 27815 strain=ATCC 27815 na latest Complete Genome Major Full 2008-02-26 ASM1934v1 TIGR GCA_000019345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/345/GCF_000019345.1_ASM1934v1/ na assembly from type material na haploid bacteria 751679 751679 25.500000 1 1 1 NCBI RefSeq GCF_000019345.1-RS_2025_12_13 2025-12-13 648 606 39 na GCF_000019365.1 PRJNA224116 SAMN00623053 na na 426117 426117 Methylobacterium sp. 4-46 strain=Apr-46 na latest Complete Genome Major Full 2008-02-20 ASM1936v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/365/GCF_000019365.1_ASM1936v1/ na na na haploid bacteria 7737025 7737025 71.500000 3 3 3 NCBI RefSeq GCF_000019365.1-RS_2025_02_16 2025-02-16 7139 6816 85 22887658 GCF_000019385.1 PRJNA224116 SAMN02598405 na na 481805 562 Escherichia coli ATCC 8739 strain=ATCC 8739 na latest Complete Genome Major Full 2008-03-11 ASM1938v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/385/GCF_000019385.1_ASM1938v1/ na na na haploid bacteria 4746218 4746218 51.000000 1 1 1 NCBI RefSeq GCF_000019385.1-RS_2025_06_13 2025-06-13 4574 4294 120 na GCF_000019405.1 PRJNA224116 SAMN02598524 na reference genome 228400 731 Histophilus somni 2336 strain=2336 na latest Complete Genome Major Full 2008-02-26 ASM1940v1 US DOE Joint Genome Institute GCA_000019405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/405/GCF_000019405.1_ASM1940v1/ na na na haploid bacteria 2263857 2263857 37.500000 1 1 1 NCBI RefSeq GCF_000019405.1-RS_2025_12_10 2025-12-10 2138 2023 68 22111657 GCF_000019425.1 PRJNA224116 SAMN02604262 na na 316385 562 Escherichia coli str. K-12 substr. DH10B strain=K-12 substr. DH10B na latest Complete Genome Major Full 2008-03-14 ASM1942v1 University of Wisconsin-Madison GCA_000019425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/425/GCF_000019425.1_ASM1942v1/ na na na haploid bacteria 4686137 4686137 51.000000 1 1 1 NCBI RefSeq GCF_000019425.1-RS_2025_06_09 2025-06-09 4590 4261 122 18245285 GCF_000019485.1 PRJNA224116 SAMN01081740 na na 32049 32049 Picosynechococcus sp. PCC 7002 strain=PCC 7002 na latest Complete Genome Major Full 2008-03-14 ASM1948v1 Penn State University GCA_000019485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/485/GCF_000019485.1_ASM1948v1/ na na na haploid bacteria 3409935 3409935 49.000000 7 7 7 NCBI RefSeq GCF_000019485.1-RS_2024_11_05 2024-11-05 3281 3207 55 na GCF_000019505.1 PRJNA224116 SAMN02598404 na na 406425 2978683 Burkholderia orbicola MC0-3 strain=MC0-3 na latest Complete Genome Major Full 2008-03-13 ASM1950v1 US DOE Joint Genome Institute GCA_000019505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/505/GCF_000019505.1_ASM1950v1/ na na na haploid bacteria 7971389 7971389 66.500000 3 3 3 NCBI RefSeq GCF_000019505.1-RS_2026_04_01 2026-04-01 7287 7093 91 na GCF_000019525.1 PRJNA224116 SAMN02598391 na reference genome 392500 60961 Shewanella woodyi ATCC 51908 strain=ATCC 51908 na latest Complete Genome Major Full 2008-03-13 ASM1952v1 US DOE Joint Genome Institute GCA_000019525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/525/GCF_000019525.1_ASM1952v1/ na assembly from type material na haploid bacteria 5935403 5935403 43.500000 1 1 1 NCBI RefSeq GCF_000019525.1-RS_2025_12_10 2025-12-10 5102 4893 165 na GCF_000019545.1 PRJNA224116 SAMN02603536 na na 498214 1491 Clostridium botulinum A3 str. Loch Maree strain=Loch Maree na latest Complete Genome Major Full 2008-03-05 ASM1954v1 Los Alamos National Laboratory GCA_000019545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/545/GCF_000019545.1_ASM1954v1/ na na na haploid bacteria 4259691 4259691 28.000000 2 2 2 NCBI RefSeq GCF_000019545.1-RS_2026_04_24 2026-04-24 4057 3866 112 18060065 GCF_000019585.2 PRJNA224116 SAMN02603061 na na 360094 347 Xanthomonas oryzae pv. oryzae PXO99A strain=PXO99A na latest Complete Genome Major Full 2015-06-29 ASM1958v2 Center for Bioinformatics and Computational Biology GCA_000019585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/585/GCF_000019585.2_ASM1958v2/ na na na haploid bacteria 5238555 5238555 63.500000 1 1 1 NCBI RefSeq GCF_000019585.2-RS_2026_04_25 2026-04-25 4915 3915 211 18452608;27148456 GCF_000019605.1 PRJNA224116 SAMN02598368 na reference genome 374847 498846 Candidatus Korarchaeum cryptofilum OPF8 na OPF8 latest Complete Genome Major Full 2008-03-18 ASM1960v1 US DOE Joint Genome Institute GCA_000019605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/605/GCF_000019605.1_ASM1960v1/ na na na haploid archaea 1590757 1590757 49.000000 1 1 1 NCBI RefSeq GCF_000019605.1-RS_2025_09_08 2025-09-08 1730 1671 51 18535141 GCF_000019625.1 PRJNA224116 SAMN00000279 na na 126740 126740 Thermotoga sp. RQ2 strain=RQ2 na latest Complete Genome Major Full 2008-03-18 ASM1962v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/625/GCF_000019625.1_ASM1962v1/ na na na haploid bacteria 1877693 1877693 46.000000 1 1 1 NCBI RefSeq GCF_000019625.1-RS_2024_08_13 2024-08-13 1912 1844 52 21952543 GCF_000019645.1 PRJNA224116 SAMN02604066 na na 439855 562 Escherichia coli SMS-3-5 strain=SMS-3-5 na latest Complete Genome Major Full 2008-03-20 ASM1964v1 TIGR GCA_000019645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/645/GCF_000019645.1_ASM1964v1/ na assembly designated as clade exemplar na haploid bacteria 5215377 5215377 50.500000 5 5 5 NCBI RefSeq GCF_000019645.1-RS_2025_06_09 2025-06-09 5039 4706 117 18708504 GCF_000019665.1 PRJNA224116 SAMN02604183 na reference genome 481448 511746 Methylacidiphilum infernorum V4 strain=V4 na latest Complete Genome Major Full 2008-05-30 ASM1966v1 University of Hawaii GCA_000019665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/665/GCF_000019665.1_ASM1966v1/ na assembly from type material na haploid bacteria 2287145 2287145 45.500000 1 1 1 NCBI RefSeq GCF_000019665.1-RS_2025_11_20 2025-11-20 2132 2056 52 18593465 GCF_000019685.1 PRJNA224116 SAMN02603585 na reference genome 412419 40834 Borrelia duttonii Ly strain=Ly na latest Complete Genome Major Full 2008-09-15 ASM1968v1 Marseille-Nice Genopole GCA_000019685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/685/GCF_000019685.1_ASM1968v1/ na assembly designated as reftype na haploid bacteria 1574881 1574881 28.000000 17 17 17 NCBI RefSeq GCF_000019685.1-RS_2025_11_23 2025-11-23 1574 1412 38 18787695 GCF_000019705.1 PRJNA224116 SAMN02603586 na reference genome 412418 44449 Borrelia recurrentis A1 strain=A1 na latest Complete Genome Major Full 2008-09-15 ASM1970v1 Marseille-Nice Genopole GCA_000019705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/705/GCF_000019705.1_ASM1970v1/ na assembly designated as reftype na haploid bacteria 1242163 1242163 27.500000 8 8 8 NCBI RefSeq GCF_000019705.1-RS_2025_12_13 2025-12-13 1227 1089 38 na GCF_000019725.1 PRJNA224116 SAMN00000277 na reference genome 426355 31998 Methylobacterium radiotolerans JCM 2831 strain=JCM 2831 na latest Complete Genome Major Full 2008-03-21 ASM1972v1 US DOE Joint Genome Institute GCA_000019725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/725/GCF_000019725.1_ASM1972v1/ na assembly from type material na haploid bacteria 6899110 6899110 71.000000 9 9 9 NCBI RefSeq GCF_000019725.1-RS_2026_03_05 2026-03-05 6610 6449 83 22887658 GCF_000019765.1 PRJNA224116 SAMN02598408 na na 405441 2371 Xylella fastidiosa M23 strain=M23 na latest Complete Genome Major Full 2008-04-11 ASM1976v1 US DOE Joint Genome Institute GCA_000019765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/765/GCF_000019765.1_ASM1976v1/ na na na haploid bacteria 2573987 2573987 51.500000 2 2 2 NCBI RefSeq GCF_000019765.1-RS_2026_05_05 2026-05-05 2325 2205 59 20601474 GCF_000019785.1 PRJNA224116 SAMN02598429 na reference genome 395495 34029 Leptothrix cholodnii SP-6 strain=SP-6 na latest Complete Genome Major Full 2008-03-25 ASM1978v1 US DOE Joint Genome Institute GCA_000019785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/785/GCF_000019785.1_ASM1978v1/ na na na haploid bacteria 4909403 4909403 69.000000 1 1 1 NCBI RefSeq GCF_000019785.1-RS_2026_03_30 2026-03-30 4460 4371 59 16348826 GCF_000019805.1 PRJNA224116 SAMN02598332 na reference genome 444157 70771 Pyrobaculum neutrophilum V24Sta strain=V24Sta na latest Complete Genome Major Full 2008-03-27 ASM1980v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/805/GCF_000019805.1_ASM1980v1/ na assembly from type material na haploid archaea 1769823 1769823 60.000000 1 1 1 NCBI RefSeq GCF_000019805.1-RS_2026_05_01 2026-05-01 2071 2009 49 na GCF_000019845.1 PRJNA224116 SAMN02598441 na reference genome 395963 533 Beijerinckia indica subsp. indica ATCC 9039 strain=ATCC 9039 na latest Complete Genome Major Full 2008-04-11 ASM1984v1 US DOE Joint Genome Institute GCA_000019845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/845/GCF_000019845.1_ASM1984v1/ na assembly from type material na haploid bacteria 4418616 4418616 57.000000 3 3 3 NCBI RefSeq GCF_000019845.1-RS_2026_04_23 2026-04-23 3970 3805 64 20601475 GCF_000019865.1 PRJNA224116 SAMN02603766 na na 434923 777 Coxiella burnetii CbuG_Q212 strain=CbuG_Q212 na latest Complete Genome Major Full 2008-11-06 ASM1986v1 Rocky Mountain Laboratories GCA_000019865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/865/GCF_000019865.1_ASM1986v1/ na na na haploid bacteria 2008870 2008870 42.500000 1 1 1 NCBI RefSeq GCF_000019865.1-RS_2025_04_15 2025-04-15 2150 1889 50 19047403 GCF_000019885.1 PRJNA224116 SAMN02603767 na na 434924 777 Coxiella burnetii CbuK_Q154 strain=CbuK_Q154 na latest Complete Genome Major Full 2008-11-06 ASM1988v1 Rocky Mountain Laboratories GCA_000019885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/885/GCF_000019885.1_ASM1988v1/ na na na haploid bacteria 2102380 2102380 42.500000 2 2 2 NCBI RefSeq GCF_000019885.1-RS_2025_04_15 2025-04-15 2220 1944 51 19047403 GCF_000019905.1 PRJNA224116 SAMN00120225 na reference genome 262543 340145 Exiguobacterium artemiae 255-15 strain=255-15 na latest Complete Genome Major Full 2008-04-03 ASM1990v1 US DOE Joint Genome Institute GCA_000019905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/905/GCF_000019905.1_ASM1990v1/ na assembly from heterotypic synonym type material na haploid bacteria 3040786 3040786 47.500000 3 3 3 NCBI RefSeq GCF_000019905.1-RS_2025_08_05 2025-08-05 3157 3027 100 16489412;19019206 GCF_000019925.1 PRJNA224116 SAMN02598385 na na 398577 152480 Burkholderia ambifaria MC40-6 strain=MC40-6 na latest Complete Genome Major Full 2008-04-03 ASM1992v1 US DOE Joint Genome Institute GCA_000019925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/925/GCF_000019925.1_ASM1992v1/ na na na haploid bacteria 7642536 7642536 66.500000 4 4 4 NCBI RefSeq GCF_000019925.1-RS_2026_01_13 2026-01-13 6926 6676 90 na GCF_000019945.1 PRJNA224116 SAMN00000038 na reference genome 441620 223967 Methylorubrum populi BJ001 strain=BJ001 na latest Complete Genome Major Full 2008-04-09 ASM1994v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000019945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/945/GCF_000019945.1_ASM1994v1/ na assembly from type material na haploid bacteria 5848997 5848997 69.500000 3 3 3 NCBI RefSeq GCF_000019945.1-RS_2026_03_30 2026-03-30 5557 5397 75 22887658 GCF_000019965.1 PRJNA224116 SAMN00000285 na reference genome 452637 107709 Opitutus terrae PB90-1 strain=PB90-1 na latest Complete Genome Major Full 2008-04-08 ASM1996v1 US DOE Joint Genome Institute GCA_000019965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/965/GCF_000019965.1_ASM1996v1/ na assembly from type material na haploid bacteria 5957605 5957605 65.500000 1 1 1 NCBI RefSeq GCF_000019965.1-RS_2026_05_05 2026-05-05 4717 4615 80 21398538 GCF_000019985.1 PRJNA224116 SAMN02603015 na na 516950 1313 Streptococcus pneumoniae CGSP14 strain=CGSP14 na latest Complete Genome Major Full 2008-04-11 ASM1998v1 Beijing Institute of Genomics GCA_000019985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/019/985/GCF_000019985.1_ASM1998v1/ na na na haploid bacteria 2209198 2209198 39.500000 1 1 1 NCBI RefSeq GCF_000019985.1-RS_2026_02_04 2026-02-04 2238 1981 72 19361343 GCF_000020005.1 PRJNA224116 SAMN02598430 na reference genome 457570 375929 Natranaerobius thermophilus JW/NM-WN-LF strain=JW/NM-WN-LF na latest Complete Genome Major Full 2008-04-09 ASM2000v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/005/GCF_000020005.1_ASM2000v1/ na assembly from type material na haploid bacteria 3191453 3191453 36.500000 3 3 3 NCBI RefSeq GCF_000020005.1-RS_2026_03_27 2026-03-27 3022 2929 67 21642468 GCF_000020025.1 PRJNA224116 SAMN02598449 na reference genome 63737 272131 Nostoc punctiforme PCC 73102 strain=ATCC 29133; PCC 73102 na latest Complete Genome Major Full 2008-04-24 ASM2002v1 US DOE Joint Genome Institute GCA_000020025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/025/GCF_000020025.1_ASM2002v1/ na assembly from type material na haploid bacteria 9059191 9059191 41.500000 6 6 6 NCBI RefSeq GCF_000020025.1-RS_2026_03_15 2026-03-15 7724 7325 100 23463784 GCF_000020045.1 PRJNA224116 SAMN02598384 na reference genome 391038 148447 Paraburkholderia phymatum STM815 strain=STM815 na latest Complete Genome Major Full 2008-04-22 ASM2004v1 US DOE Joint Genome Institute GCA_000020045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/045/GCF_000020045.1_ASM2004v1/ na assembly from type material na haploid bacteria 8676562 8676562 62.500000 4 4 4 NCBI RefSeq GCF_000020045.1-RS_2025_12_09 2025-12-09 7921 7533 86 na GCF_000020065.1 PRJNA224116 SAMN02604019 na na 243272 2111 Metamycoplasma arthritidis 158L3-1 strain=158L3-1 na latest Complete Genome Major Full 2008-06-25 ASM2006v1 TIGR GCA_000020065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/065/GCF_000020065.1_ASM2006v1/ na na na haploid bacteria 820453 820453 30.500000 1 1 1 NCBI RefSeq GCF_000020065.1-RS_2026_02_02 2026-02-02 672 631 39 18573899 GCF_000020105.1 PRJNA224116 SAMN02603475 na na 521006 485 Neisseria gonorrhoeae NCCP11945 strain=NCCP11945 na latest Complete Genome Major Full 2008-07-09 ASM2010v1 Korea Centers for Disease Control and Prevention GCA_000020105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/105/GCF_000020105.1_ASM2010v1/ na na na haploid bacteria 2236178 2236178 52.500000 2 2 2 NCBI RefSeq GCF_000020105.1-RS_2026_01_04 2026-01-04 2370 2044 71 18586945 GCF_000020125.1 PRJNA224116 SAMN02598395 na reference genome 398527 261302 Paraburkholderia phytofirmans PsJN strain=PsJN na latest Complete Genome Major Full 2008-05-07 ASM2012v1 US DOE Joint Genome Institute GCA_000020125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/125/GCF_000020125.1_ASM2012v1/ na assembly from type material na haploid bacteria 8214658 8214658 62.500000 3 3 3 NCBI RefSeq GCF_000020125.1-RS_2025_12_10 2025-12-10 7438 7238 86 21551308;22099516 GCF_000020145.1 PRJNA224116 SAMN00000042 na reference genome 445932 423605 Elusimicrobium minutum Pei191 strain=Pei191 na latest Complete Genome Major Full 2008-04-30 ASM2014v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/145/GCF_000020145.1_ASM2014v1/ na assembly from type material na haploid bacteria 1643562 1643562 40.000000 1 1 1 NCBI RefSeq GCF_000020145.1-RS_2026_03_27 2026-03-27 1592 1536 49 19270133 GCF_000020185.1 PRJNA224116 SAMN02604039 na na 344609 621 Shigella boydii CDC 3083-94 strain=BS512; CDC 3083-94 na latest Complete Genome Major Full 2008-05-08 ASM2018v1 TIGR GCA_000020185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/185/GCF_000020185.1_ASM2018v1/ na na na haploid bacteria 4874659 4874659 51.000000 6 6 6 NCBI RefSeq GCF_000020185.1-RS_2025_07_05 2025-07-05 5169 4193 131 na GCF_000020225.1 PRJNA224116 SAMN00138213 na na 349741 239935 Akkermansia muciniphila ATCC BAA-835 strain=ATCC BAA-835 na latest Complete Genome Major Full 2008-05-05 ASM2022v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/225/GCF_000020225.1_ASM2022v1/ na assembly from type material na haploid bacteria 2664102 2664102 56.000000 1 1 1 NCBI RefSeq GCF_000020225.1-RS_2026_05_05 2026-05-05 2216 2139 64 35896748 GCF_000020245.1 PRJNA224116 SAMN02604319 na na 512562 210 Helicobacter pylori Shi470 strain=Shi470 na latest Complete Genome Major Full 2008-06-09 ASM2024v1 Washington University Medical School GCA_000020245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/245/GCF_000020245.1_ASM2024v1/ na na na haploid bacteria 1608548 1608548 39.000000 1 1 1 NCBI RefSeq GCF_000020245.1-RS_2026_01_15 2026-01-15 1562 1434 45 na GCF_000020285.1 PRJNA224116 SAMN02603537 na na 508767 1491 Clostridium botulinum E3 str. Alaska E43 strain=Alaska E43 na latest Complete Genome Major Full 2008-05-16 ASM2028v1 Los Alamos National Laboratory GCA_000020285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/285/GCF_000020285.1_ASM2028v1/ na na na haploid bacteria 3659644 3659644 27.500000 1 1 1 NCBI RefSeq GCF_000020285.1-RS_2025_06_05 2025-06-05 3346 3194 117 na GCF_000020305.1 PRJNA224116 SAMN02604306 na reference genome 320483 770 Anaplasma marginale str. Florida strain=Florida na latest Complete Genome Major Full 2009-02-03 ASM2030v1 Washington State University GCA_000020305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/305/GCF_000020305.1_ASM2030v1/ na na na haploid bacteria 1202435 1202435 50.000000 1 1 1 NCBI RefSeq GCF_000020305.1-RS_2026_01_08 2026-01-08 995 925 44 1280624;7693596;7927726;8063397;8975906;10925201;12379676;15557651;19134224 GCF_000020325.1 PRJNA224116 SAMN02598418 na na 436114 436114 Sulfurihydrogenibium sp. YO3AOP1 strain=YO3AOP1 na latest Complete Genome Major Full 2008-05-21 ASM2032v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/325/GCF_000020325.1_ASM2032v1/ na na na haploid bacteria 1838442 1838442 32.000000 1 1 1 NCBI RefSeq GCF_000020325.1-RS_2024_05_05 2024-05-05 1876 1783 52 19136599 GCF_000020345.1 PRJNA224116 SAMN02603539 na na 515621 1491 Clostridium botulinum Ba4 str. 657 strain=657 na latest Complete Genome Major Full 2009-05-01 ASM2034v1 Los Alamos National Laboratory GCA_000020345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/345/GCF_000020345.1_ASM2034v1/ na na na haploid bacteria 4257769 4257769 28.000000 3 3 3 NCBI RefSeq GCF_000020345.1-RS_2026_04_24 2026-04-24 4207 4024 113 18060065 GCF_000020365.1 PRJNA224116 SAMN02603282 na reference genome 177437 2296 Desulforapulum autotrophicum HRM2 strain=HRM2 na latest Complete Genome Major Full 2009-02-18 ASM2036v1 Goettingen Genomics Laboratory GCA_000020365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/365/GCF_000020365.1_ASM2036v1/ na assembly from type material na haploid bacteria 5657782 5657782 49.000000 2 2 2 NCBI RefSeq GCF_000020365.1-RS_2025_12_13 2025-12-13 4986 4867 74 19187283 GCF_000020385.1 PRJNA224116 SAMN00623044 na reference genome 398767 313985 Trichlorobacter lovleyi SZ strain=SZ na latest Complete Genome Major Full 2008-06-05 ASM2038v1 US DOE Joint Genome Institute GCA_000020385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/385/GCF_000020385.1_ASM2038v1/ na assembly from type material na haploid bacteria 3994874 3994874 54.500000 2 2 2 NCBI RefSeq GCF_000020385.1-RS_2025_12_10 2025-12-10 3747 3664 54 na GCF_000020405.1 PRJNA224116 SAMN02603888 na na 537457 715 Actinobacillus pleuropneumoniae serovar 7 str. AP76 strain=AP76 na latest Complete Genome Major Full 2008-06-10 ASM2040v1 Stiftung Tieraerztliche Hochschule Hannover GCA_000020405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/405/GCF_000020405.1_ASM2040v1/ na na na haploid bacteria 2345435 2345435 41.000000 4 4 4 NCBI RefSeq GCF_000020405.1-RS_2026_04_20 2026-04-20 2243 2093 85 na GCF_000020425.1 PRJNA224116 SAMN02598380 na na 391904 216816 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 strain=ATCC 15697 na latest Complete Genome Major Full 2008-11-20 ASM2042v1 US DOE Joint Genome Institute GCA_000020425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/425/GCF_000020425.1_ASM2042v1/ na assembly from type material na haploid bacteria 2832748 2832748 60.000000 1 1 1 NCBI RefSeq GCF_000020425.1-RS_2026_07_01 2026-07-01 2672 2462 100 19033196 GCF_000020445.1 PRJNA224116 SAMN00000049 na na 395960 1076 Rhodopseudomonas palustris TIE-1 strain=TIE-1 na latest Complete Genome Major Full 2008-06-23 ASM2044v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/445/GCF_000020445.1_ASM2044v1/ na na na haploid bacteria 5744041 5744041 65.000000 1 1 1 NCBI RefSeq GCF_000020445.1-RS_2026_05_26 2026-05-26 5384 5264 61 na GCF_000020465.1 PRJNA224116 SAMN02598270 na reference genome 290315 1092 Chlorobium limicola DSM 245 strain=DSM 245 na latest Complete Genome Major Full 2008-06-04 ASM2046v1 US DOE Joint Genome Institute GCA_000020465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/465/GCF_000020465.1_ASM2046v1/ na assembly from type material na haploid bacteria 2763181 2763181 51.500000 1 1 1 NCBI RefSeq GCF_000020465.1-RS_2025_12_16 2025-12-16 2541 2444 57 na GCF_000020485.1 PRJNA224116 SAMN00623047 na reference genome 373903 31909 Halothermothrix orenii H 168 strain=H 168 na latest Complete Genome Major Full 2009-01-13 ASM2048v1 US DOE Joint Genome Institute GCA_000020485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/485/GCF_000020485.1_ASM2048v1/ na assembly from type material na haploid bacteria 2578146 2578146 38.000000 1 1 1 NCBI RefSeq GCF_000020485.1-RS_2026_05_13 2026-05-13 2493 2399 71 19145256 GCF_000020505.1 PRJNA224116 SAMN02598460 na reference genome 517417 274539 Chlorobaculum parvum NCIB 8327 strain=NCIB 8327 na latest Complete Genome Major Full 2008-06-27 ASM2050v1 US DOE Joint Genome Institute GCA_000020505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/505/GCF_000020505.1_ASM2050v1/ na na na haploid bacteria 2289249 2289249 56.000000 1 1 1 NCBI RefSeq GCF_000020505.1-RS_2025_12_13 2025-12-13 2165 2086 58 na GCF_000020525.1 PRJNA224116 SAMN02598461 na reference genome 517418 100716 Chloroherpeton thalassium ATCC 35110 strain=ATCC 35110 na latest Complete Genome Major Full 2008-06-27 ASM2052v1 US DOE Joint Genome Institute GCA_000020525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/525/GCF_000020525.1_ASM2052v1/ na assembly from type material na haploid bacteria 3293456 3293456 45.000000 1 1 1 NCBI RefSeq GCF_000020525.1-RS_2025_08_11 2025-08-11 2792 2720 50 na GCF_000020565.1 PRJNA224116 SAMN00000287 na reference genome 452471 281120 Candidatus Amoebophilus asiaticus 5a2 strain=5a2 na latest Complete Genome Major Full 2008-06-09 ASM2056v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/565/GCF_000020565.1_ASM2056v1/ na na na haploid bacteria 1884364 1884364 35.000000 1 1 1 NCBI RefSeq GCF_000020565.1-RS_2025_12_11 2025-12-11 1493 1292 40 20023027 GCF_000020585.3 PRJNA224116 SAMN02603915 na na 1774373 314275 Alteromonas mediterranea DE strain=DE na latest Complete Genome Major Full 2013-09-13 ASM2058v3 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000020585.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/585/GCF_000020585.3_ASM2058v3/ na assembly from type material na haploid bacteria 4480937 4480937 45.000000 1 1 1 NCBI RefSeq GCF_000020585.3-RS_2026_03_03 2026-03-03 3994 3817 80 18670397;25326795 GCF_000020605.1 PRJNA224116 SAMN02603082 na na 515619 39491 Agathobacter rectalis ATCC 33656 strain=ATCC 33656 na latest Complete Genome Major Full 2009-06-04 ASM2060v1 Center for Genome Sciences, Washington University School of Medicine GCA_000020605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/605/GCF_000020605.1_ASM2060v1/ na assembly from type material na haploid bacteria 3449685 3449685 41.500000 1 1 1 NCBI RefSeq GCF_000020605.1-RS_2026_02_27 2026-02-27 3368 3226 79 19321416 GCF_000020625.1 PRJNA224116 SAMN02598281 na reference genome 290512 1102 Prosthecochloris aestuarii DSM 271 strain=DSM 271 na latest Complete Genome Major Full 2008-07-18 ASM2062v1 US DOE Joint Genome Institute GCA_000020625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/625/GCF_000020625.1_ASM2062v1/ na assembly from type material na haploid bacteria 2579695 2579695 50.000000 2 2 2 NCBI RefSeq GCF_000020625.1-RS_2026_04_21 2026-04-21 2405 2321 52 na GCF_000020645.1 PRJNA224116 SAMN02598283 na reference genome 324925 34090 Pelodictyon phaeoclathratiforme BU-1 strain=BU-1 na latest Complete Genome Major Full 2008-07-18 ASM2064v1 US DOE Joint Genome Institute GCA_000020645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/645/GCF_000020645.1_ASM2064v1/ na assembly from type material na haploid bacteria 3018238 3018238 48.000000 1 1 1 NCBI RefSeq GCF_000020645.1-RS_2025_12_11 2025-12-11 2921 2772 61 na GCF_000020665.1 PRJNA224116 SAMN00623065 na na 391008 40324 Stenotrophomonas maltophilia R551-3 strain=R551-3 na latest Complete Genome Major Full 2008-07-21 ASM2066v1 US DOE Joint Genome Institute GCA_000020665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/665/GCF_000020665.1_ASM2066v1/ na na na haploid bacteria 4573969 4573969 66.500000 1 1 1 NCBI RefSeq GCF_000020665.1-RS_2026_06_06 2026-06-06 4146 4049 90 na GCF_000020685.1 PRJNA224116 SAMN02603250 na reference genome 546414 310783 Deinococcus deserti VCD115 strain=VCD115 na latest Complete Genome Major Full 2009-04-02 ASM2068v1 Genoscope GCA_000020685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/685/GCF_000020685.1_ASM2068v1/ na assembly from type material na haploid bacteria 3855329 3855329 63.000000 4 4 4 NCBI RefSeq GCF_000020685.1-RS_2026_03_30 2026-03-30 3579 3481 62 19370165;19875382;24723731 GCF_000020705.1 PRJNA224116 SAMN02604067 na na 454169 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 strain=SL476 na latest Complete Genome Major Full 2008-07-24 ASM2070v1 TIGR/J. Craig Venter Institute GCA_000020705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/705/GCF_000020705.1_ASM2070v1/ na na na haploid bacteria 4983515 4983515 52.000000 3 3 3 NCBI RefSeq GCF_000020705.1-RS_2025_04_26 2025-04-26 4891 4632 122 21602358 GCF_000020725.1 PRJNA224116 SAMN02598400 na reference genome 404380 225194 Citrifermentans bemidjiense Bem strain=Bem na latest Complete Genome Major Full 2008-08-19 ASM2072v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/725/GCF_000020725.1_ASM2072v1/ na assembly from type material na haploid bacteria 4615150 4615150 60.500000 1 1 1 NCBI RefSeq GCF_000020725.1-RS_2025_11_23 2025-11-23 4135 4028 76 20828392 GCF_000020745.1 PRJNA224116 SAMN02604064 na na 439843 28901 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 strain=CVM19633 na latest Complete Genome Major Full 2008-07-30 ASM2074v1 TIGR GCA_000020745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/745/GCF_000020745.1_ASM2074v1/ na na na haploid bacteria 4823887 4823887 52.000000 3 3 3 NCBI RefSeq GCF_000020745.1-RS_2025_04_26 2025-04-26 4761 4477 120 21602358 GCF_000020765.1 PRJNA224116 SAMN02603943 na na 552526 1336 Streptococcus equi subsp. zooepidemicus MGCS10565 strain=MGCS10565; ATCC BAA1716 na latest Complete Genome Major Full 2008-08-11 ASM2076v1 The Methodist Hospital Research Institute GCA_000020765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/765/GCF_000020765.1_ASM2076v1/ na na na haploid bacteria 2024171 2024171 42.000000 1 1 1 NCBI RefSeq GCF_000020765.1-RS_2026_05_01 2026-05-01 1912 1754 76 18716664 GCF_000020785.1 PRJNA224116 SAMN02598419 na na 380749 380749 Hydrogenobaculum sp. Y04AAS1 strain=Y04AAS1 na latest Complete Genome Major Full 2008-08-06 ASM2078v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/785/GCF_000020785.1_ASM2078v1/ na na na haploid bacteria 1559514 1559514 35.000000 1 1 1 NCBI RefSeq GCF_000020785.1-RS_2024_05_05 2024-05-05 1682 1620 54 19136599 GCF_000020805.1 PRJNA224116 SAMN00000041 na na 447217 447217 Anaeromyxobacter sp. K strain=K na latest Complete Genome Major Full 2008-08-15 ASM2080v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000020805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/805/GCF_000020805.1_ASM2080v1/ na na na haploid bacteria 5061632 5061632 75.000000 1 1 1 NCBI RefSeq GCF_000020805.1-RS_2024_08_13 2024-08-13 4557 4474 59 na GCF_000020825.1 PRJNA224116 SAMN02598372 na na 380394 920 Acidithiobacillus ferrooxidans ATCC 53993 strain=ATCC 53993 na latest Complete Genome Major Full 2008-09-05 ASM2082v1 US DOE Joint Genome Institute GCA_000020825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/825/GCF_000020825.1_ASM2082v1/ na na na haploid bacteria 2885038 2885038 59.000000 1 1 1 NCBI RefSeq GCF_000020825.1-RS_2026_01_30 2026-01-30 2947 2842 56 na GCF_000020845.1 PRJNA224116 SAMN02603627 na na 388396 668 Aliivibrio fischeri MJ11 strain=MJ11 na latest Chromosome Major Full 2008-08-28 ASM2084v1 Moore Foundation GCA_000020845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/845/GCF_000020845.1_ASM2084v1/ na na na haploid bacteria 4503336 4503036 38.000000 3 3 6 NCBI RefSeq GCF_000020845.1-RS_2026_01_23 2026-01-23 4124 3949 150 19182778 GCF_000020885.1 PRJNA224116 SAMN02604068 na na 454166 28901 Salmonella enterica subsp. enterica serovar Agona str. SL483 strain=SL483 na latest Complete Genome Major Full 2008-08-22 ASM2088v1 TIGR/J. Craig Venter Institute GCA_000020885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/885/GCF_000020885.1_ASM2088v1/ na na na haploid bacteria 4836638 4836638 52.000000 2 2 2 NCBI RefSeq GCF_000020885.1-RS_2025_04_26 2025-04-26 4715 4459 119 21602358 GCF_000020905.1 PRJNA224116 SAMN02603098 na na 490899 94694 Desulfurococcus amylolyticus 1221n strain=1221n na latest Complete Genome Major Full 2008-12-24 ASM2090v1 Centre 'Bioengineering' RAS GCA_000020905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/905/GCF_000020905.1_ASM2090v1/ na assembly from heterotypic synonym type material na haploid archaea 1365223 1365223 45.500000 1 1 1 NCBI RefSeq GCF_000020905.1-RS_2026_03_30 2026-03-30 1498 1437 52 19114480 GCF_000020925.1 PRJNA224116 SAMN02604065 na na 439851 28901 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 strain=CT_02021853 na latest Complete Genome Major Full 2008-09-04 ASM2092v1 TIGR GCA_000020925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/925/GCF_000020925.1_ASM2092v1/ na na na haploid bacteria 4917459 4917459 52.000000 2 2 2 NCBI RefSeq GCF_000020925.1-RS_2025_02_21 2025-02-21 4852 4504 118 21602358 GCF_000020945.1 PRJNA224116 SAMN02603927 na reference genome 309798 35786 Coprothermobacter proteolyticus DSM 5265 strain=DSM 5265 na latest Complete Genome Major Full 2008-09-26 ASM2094v1 The J. Craig Venter Institute GCA_000020945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/945/GCF_000020945.1_ASM2094v1/ na assembly from type material na haploid bacteria 1424912 1424912 45.000000 1 1 1 NCBI RefSeq GCF_000020945.1-RS_2025_12_09 2025-12-09 1477 1412 57 24831154 GCF_000020965.1 PRJNA224116 SAMN02603928 na reference genome 309799 14 Dictyoglomus thermophilum H-6-12 strain=H-6-12; ATCC 35947 na latest Complete Genome Major Full 2008-09-26 ASM2096v1 The J. Craig Venter Institute GCA_000020965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/965/GCF_000020965.1_ASM2096v1/ na assembly from type material na haploid bacteria 1959987 1959987 33.500000 1 1 1 NCBI RefSeq GCF_000020965.1-RS_2025_12_11 2025-12-11 1950 1881 55 24558247 GCF_000020985.1 PRJNA224116 SAMN02603929 na reference genome 289376 28262 Thermodesulfovibrio yellowstonii DSM 11347 strain=DSM 11347 na latest Complete Genome Major Full 2008-09-26 ASM2098v1 The J. Craig Venter Institute GCA_000020985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/985/GCF_000020985.1_ASM2098v1/ na assembly from type material na haploid bacteria 2003803 2003803 34.000000 1 1 1 NCBI RefSeq GCF_000020985.1-RS_2026_04_06 2026-04-06 2059 1995 55 25635016 GCF_000021005.1 PRJNA224116 SAMN02603252 na na 557760 1063 Cereibacter sphaeroides KD131 strain=KD131; KCTC 12085 na latest Complete Genome Major Full 2009-01-22 ASM2100v1 GenoTech corp. GCA_000021005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/005/GCF_000021005.1_ASM2100v1/ na na na haploid bacteria 4711139 4711139 69.000000 4 4 4 NCBI RefSeq GCF_000021005.1-RS_2025_12_22 2025-12-22 4486 4348 70 19028901 GCF_000021025.1 PRJNA224116 SAMN02603956 na na 557598 168471 Laribacter hongkongensis HLHK9 strain=HLHK9 na latest Complete Genome Major Full 2009-04-14 ASM2102v1 The University of Hong Kong GCA_000021025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/025/GCF_000021025.1_ASM2102v1/ na na na haploid bacteria 3169329 3169329 62.500000 1 1 1 NCBI RefSeq GCF_000021025.1-RS_2025_09_02 2025-09-02 3160 2953 103 19283063 GCF_000021045.1 PRJNA224116 SAMN02604349 na na 322710 354 Azotobacter vinelandii DJ strain=DJ; ATCC BAA-1303 na latest Complete Genome Major Full 2009-04-14 ASM2104v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/045/GCF_000021045.1_ASM2104v1/ na na na haploid bacteria 5365318 5365318 65.500000 1 1 1 NCBI RefSeq GCF_000021045.1-RS_2025_12_11 2025-12-11 4922 4687 86 19429624 GCF_000021065.1 PRJNA224116 SAMN02604133 na na 561501 9 Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) strain=Tuc7 na latest Complete Genome Major Full 2009-01-06 ASM2106v1 University of Arizona GCA_000021065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/065/GCF_000021065.1_ASM2106v1/ na na na haploid bacteria 641895 641895 26.500000 1 1 1 NCBI RefSeq GCF_000021065.1-RS_2025_03_12 2025-03-12 615 568 37 19150844 GCF_000021085.1 PRJNA224116 SAMN02604134 na na 563178 9 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) strain=5A na latest Complete Genome Major Full 2009-01-06 ASM2108v1 University of Arizona GCA_000021085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/085/GCF_000021085.1_ASM2108v1/ na na na haploid bacteria 642122 642122 26.500000 1 1 1 NCBI RefSeq GCF_000021085.1-RS_2025_03_12 2025-03-12 615 567 37 19150844 GCF_000021125.1 PRJNA224116 SAMN02603441 na na 444450 562 Escherichia coli O157:H7 str. EC4115 strain=EC4115 na latest Complete Genome Major Full 2008-10-08 ASM2112v1 J. Craig Venter Institute GCA_000021125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/125/GCF_000021125.1_ASM2112v1/ na na na haploid bacteria 5704171 5704171 50.500000 3 3 3 NCBI RefSeq GCF_000021125.1-RS_2025_06_09 2025-06-09 5789 5314 138 22135463 GCF_000021165.1 PRJNA224116 SAMN02604237 na na 563041 210 Helicobacter pylori G27 strain=G27 na latest Complete Genome Major Full 2008-10-03 ASM2116v1 University of Oregon GCA_000021165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/165/GCF_000021165.1_ASM2116v1/ na na na haploid bacteria 1663013 1663013 39.000000 2 2 2 NCBI RefSeq GCF_000021165.1-RS_2025_04_15 2025-04-15 1605 1457 46 18952803 GCF_000021185.1 PRJNA224116 SAMN02603154 na na 552536 1639 Listeria monocytogenes HCC23 strain=HCC23 na latest Complete Genome Major Full 2008-12-12 ASM2118v1 College of Veterinary Medicine, Mississippi State University GCA_000021185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/185/GCF_000021185.1_ASM2118v1/ na na na haploid bacteria 2976212 2976212 38.000000 1 1 1 NCBI RefSeq GCF_000021185.1-RS_2025_04_15 2025-04-15 3049 2918 89 21602330 GCF_000021205.1 PRJNA224116 SAMN02604059 na na 405532 1396 Bacillus cereus B4264 strain=B4264 na latest Complete Genome Major Full 2008-12-17 ASM2120v1 TIGR GCA_000021205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/205/GCF_000021205.1_ASM2120v1/ na na na haploid bacteria 5419036 5419036 35.500000 1 1 1 NCBI RefSeq GCF_000021205.1-RS_2026_05_14 2026-05-14 5514 5239 154 na GCF_000021245.2 PRJNA224116 SAMN02603051 na na 480119 470 Acinetobacter baumannii AB0057 strain=AB0057 na latest Complete Genome Major Full 2017-06-27 ASM2124v2 Case Western Reserve University GCA_000021245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/245/GCF_000021245.2_ASM2124v2/ na na na haploid bacteria 4063879 4063879 39.000000 2 2 2 NCBI RefSeq GCF_000021245.2-RS_2026_02_24 2026-02-24 3928 3763 93 18931120 GCF_000021265.1 PRJNA224116 SAMN02603440 na na 565575 2130 Ureaplasma urealyticum serovar 10 str. ATCC 33699 strain=ATCC 33699 na latest Complete Genome Major Full 2008-10-16 ASM2126v1 J. Craig Venter Institute GCA_000021265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/265/GCF_000021265.1_ASM2126v1/ na na na haploid bacteria 874478 874478 26.000000 1 1 1 NCBI RefSeq GCF_000021265.1-RS_2026_02_27 2026-02-27 693 644 39 na GCF_000021285.1 PRJNA224116 SAMN02603170 na reference genome 484019 2421 Thermosipho africanus TCF52B strain=TCF52B na latest Complete Genome Major Full 2008-12-10 ASM2128v1 Dalhousie University GCA_000021285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/285/GCF_000021285.1_ASM2128v1/ na na na haploid bacteria 2016657 2016657 31.000000 1 1 1 NCBI RefSeq GCF_000021285.1-RS_2025_09_05 2025-09-05 2048 1966 60 19124572 GCF_000021305.1 PRJNA224116 SAMN02604060 na na 405531 1396 Bacillus cereus G9842 strain=G9842 na latest Complete Genome Major Full 2008-12-19 ASM2130v1 TIGR GCA_000021305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/305/GCF_000021305.1_ASM2130v1/ na na na haploid bacteria 5736823 5736823 35.000000 3 3 3 NCBI RefSeq GCF_000021305.1-RS_2025_08_25 2025-08-25 5897 5573 143 na GCF_000021325.1 PRJNA224116 SAMN02598444 na reference genome 272568 33996 Gluconacetobacter diazotrophicus PA1 5 strain=PAl 5; ATCC 49037 na latest Complete Genome Major Full 2008-10-16 ASM2132v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/325/GCF_000021325.1_ASM2132v1/ na assembly from type material na haploid bacteria 3914947 3914947 66.500000 2 2 2 NCBI RefSeq GCF_000021325.1-RS_2025_12_22 2025-12-22 3710 3572 71 21304715 GCF_000021345.1 PRJNA224116 SAMN00000679 na na 395492 384 Rhizobium leguminosarum bv. trifolii WSM2304 strain=WSM2304 na latest Complete Genome Major Full 2008-10-16 ASM2134v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/345/GCF_000021345.1_ASM2134v1/ na na na haploid bacteria 6872702 6872702 61.000000 5 5 5 NCBI RefSeq GCF_000021345.1-RS_2025_06_09 2025-06-09 6665 6450 64 21304679 GCF_000021365.1 PRJNA224116 SAMN02603611 na na 504832 40137 Afipia carboxidovorans OM5 strain=OM5; ATCC 49405 na latest Complete Genome Major Full 2008-10-22 ASM2136v1 Mississippi State University GCA_000021365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/365/GCF_000021365.1_ASM2136v1/ na assembly from type material na haploid bacteria 3745629 3745629 62.500000 1 1 1 NCBI RefSeq GCF_000021365.1-RS_2026_05_26 2026-05-26 3614 3518 58 18539730 GCF_000021405.1 PRJNA224116 SAMN02603438 na na 445985 139 Borreliella burgdorferi ZS7 strain=ZS7 na latest Complete Genome Major Full 2008-12-17 ASM2140v1 J. Craig Venter Institute GCA_000021405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/405/GCF_000021405.1_ASM2140v1/ na na na haploid bacteria 1345494 1345494 28.500000 15 15 15 NCBI RefSeq GCF_000021405.1-RS_2026_03_20 2026-03-20 1367 1276 38 20935092 GCF_000021425.1 PRJNA224116 SAMN02603485 na na 442563 28025 Bifidobacterium animalis subsp. lactis AD011 strain=AD011 na latest Complete Genome Major Full 2009-01-06 ASM2142v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000021425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/425/GCF_000021425.1_ASM2142v1/ na na na haploid bacteria 1933695 1933695 60.500000 1 1 1 NCBI RefSeq GCF_000021425.1-RS_2026_03_27 2026-03-27 1633 1526 62 19011029 GCF_000021445.1 PRJNA224116 SAMN02603931 na na 568206 1392 Bacillus anthracis str. CDC 684 strain=CDC 684 na latest Complete Genome Major Full 2009-04-20 ASM2144v1 The J. Craig Venter Institute GCA_000021445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/445/GCF_000021445.1_ASM2144v1/ na na na haploid bacteria 5506763 5506763 35.000000 3 3 3 NCBI RefSeq GCF_000021445.1-RS_2026_02_14 2026-02-14 5775 5239 135 na GCF_000021485.1 PRJNA224116 SAMN02603974 na reference genome 243159 920 Acidithiobacillus ferrooxidans ATCC 23270 strain=ATCC 23270 na latest Complete Genome Major Full 2008-12-19 ASM2148v1 TIGR GCA_000021485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/485/GCF_000021485.1_ASM2148v1/ na assembly from type material na haploid bacteria 2982397 2982397 59.000000 1 1 1 NCBI RefSeq GCF_000021485.1-RS_2025_12_11 2025-12-11 3104 2957 92 19077236 GCF_000021525.1 PRJNA224116 SAMN02604073 na na 562019 47589 Rickettsia peacockii str. Rustic strain=Rustic na latest Complete Genome Major Full 2009-05-29 ASM2152v1 U of MN Entomology GCA_000021525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/525/GCF_000021525.1_ASM2152v1/ na na na haploid bacteria 1314898 1314898 32.500000 2 2 2 NCBI RefSeq GCF_000021525.1-RS_2025_01_08 2025-01-08 1498 1299 40 20027221 GCF_000021545.1 PRJNA224116 SAMN02604030 na reference genome 204536 309806 Sulfurihydrogenibium azorense Az-Fu1 strain=Az-Fu1 na latest Complete Genome Major Full 2009-03-25 ASM2154v1 TIGR GCA_000021545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/545/GCF_000021545.1_ASM2154v1/ na assembly from type material na haploid bacteria 1640877 1640877 33.000000 1 1 1 NCBI RefSeq GCF_000021545.1-RS_2026_05_05 2026-05-05 1773 1713 49 19136599 GCF_000021565.1 PRJNA224116 SAMN02604029 na reference genome 123214 309805 Persephonella marina EX-H1 strain=EX-H1 na latest Complete Genome Major Full 2009-03-25 ASM2156v1 TIGR GCA_000021565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/565/GCF_000021565.1_ASM2156v1/ na assembly from type material na haploid bacteria 1983966 1983966 37.000000 2 2 2 NCBI RefSeq GCF_000021565.1-RS_2026_05_05 2026-05-05 2103 2049 49 19136599 GCF_000021605.1 PRJNA224116 SAMN02603897 na na 579112 666 Vibrio cholerae M66-2 strain=M66-2 na latest Complete Genome Major Full 2009-04-20 ASM2160v1 TEDA School of Biological Sciences and Biotechnology GCA_000021605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/605/GCF_000021605.1_ASM2160v1/ na na na haploid bacteria 3938905 3938905 47.500000 2 2 2 NCBI RefSeq GCF_000021605.1-RS_2026_04_17 2026-04-17 3593 3418 123 19115014 GCF_000021625.1 PRJNA224116 SAMN02603898 na na 345073 666 Vibrio cholerae O395 strain=O395 na latest Complete Genome Major Full 2009-04-20 ASM2162v1 TEDA School of Biological Sciences and Biotechnology GCA_000021625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/625/GCF_000021625.1_ASM2162v1/ na na na haploid bacteria 4135300 4135300 47.500000 2 2 2 NCBI RefSeq GCF_000021625.1-RS_2026_04_18 2026-04-18 3860 3665 127 19115014 GCF_000021645.1 PRJNA224116 SAMN00002661 na reference genome 515635 513050 Dictyoglomus turgidum DSM 6724 strain=DSM 6724 na latest Complete Genome Major Full 2008-12-12 ASM2164v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/645/GCF_000021645.1_ASM2164v1/ na assembly from type material na haploid bacteria 1855560 1855560 34.000000 1 1 1 NCBI RefSeq GCF_000021645.1-RS_2026_04_14 2026-04-14 1882 1805 56 na GCF_000021665.1 PRJNA224116 SAMN00623062 na na 407976 62322 Shewanella baltica OS223 strain=OS223 na latest Complete Genome Major Full 2008-12-15 ASM2166v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/665/GCF_000021665.1_ASM2166v1/ na na na haploid bacteria 5358884 5358884 46.500000 4 4 4 NCBI RefSeq GCF_000021665.1-RS_2025_12_05 2025-12-05 4633 4421 142 27777983 GCF_000021685.1 PRJNA224116 SAMN02603430 na reference genome 309801 500 Thermomicrobium roseum DSM 5159 strain=DSM 5159 na latest Complete Genome Major Full 2009-01-22 ASM2168v1 J Craig Venter Institute GCA_000021685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/685/GCF_000021685.1_ASM2168v1/ na assembly from type material na haploid bacteria 2920744 2920744 64.500000 2 2 2 NCBI RefSeq GCF_000021685.1-RS_2026_03_30 2026-03-30 2640 2557 57 19148287 GCF_000021705.1 PRJNA224116 SAMN02604135 na reference genome 572265 138072 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) strain=T5A na latest Chromosome Major Full 2009-05-05 ASM2170v1 University of Arizona GCA_000021705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/705/GCF_000021705.1_ASM2170v1/ na na na haploid bacteria 2169363 2169253 40.500000 2 2 4 NCBI RefSeq GCF_000021705.1-RS_2026_05_18 2026-05-18 2247 2054 54 19451630 GCF_000021725.1 PRJNA224116 SAMN02603431 na reference genome 598659 244787 Nautilia profundicola AmH strain=AmH na latest Complete Genome Major Full 2009-02-13 ASM2172v1 J Craig Venter Institute GCA_000021725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/725/GCF_000021725.1_ASM2172v1/ na assembly from type material na haploid bacteria 1676444 1676444 33.500000 1 1 1 NCBI RefSeq GCF_000021725.1-RS_2026_03_30 2026-03-30 1793 1717 64 19197347 GCF_000021745.1 PRJNA224116 SAMN00000045 na reference genome 395965 199596 Methylocella silvestris BL2 strain=BL2 na latest Complete Genome Major Full 2008-12-15 ASM2174v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/745/GCF_000021745.1_ASM2174v1/ na assembly from type material na haploid bacteria 4305430 4305430 63.000000 1 1 1 NCBI RefSeq GCF_000021745.1-RS_2026_04_23 2026-04-23 3983 3864 59 20472789 GCF_000021765.1 PRJNA224116 SAMN00000048 na reference genome 164330 164330 Thauera aminoaromatica strain=MZ1T na latest Complete Genome Major Full 2009-05-14 ASM2176v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/765/GCF_000021765.1_ASM2176v1/ na na na haploid bacteria 4574586 4574586 68.500000 2 2 2 NCBI RefSeq GCF_000021765.1-RS_2025_12_02 2025-12-02 4141 4022 74 23407619 GCF_000021785.1 PRJNA224116 SAMN02604057 na na 405535 1396 Bacillus cereus AH820 strain=AH820 na latest Complete Genome Major Full 2008-12-19 ASM2178v1 TIGR GCA_000021785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/785/GCF_000021785.1_ASM2178v1/ na na na haploid bacteria 5588834 5588834 35.500000 4 4 4 NCBI RefSeq GCF_000021785.1-RS_2025_03_17 2025-03-17 5854 5517 137 na GCF_000021805.1 PRJNA224116 SAMN00000280 na reference genome 41431 2546366 Rippkaea orientalis PCC 8801 strain=PCC 8801 na latest Complete Genome Major Full 2008-12-17 ASM2180v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/805/GCF_000021805.1_ASM2180v1/ na assembly from type material na haploid bacteria 4787694 4787694 40.000000 4 4 4 NCBI RefSeq GCF_000021805.1-RS_2026_04_02 2026-04-02 4561 4413 55 na GCF_000021825.1 PRJNA224116 SAMN00000286 na reference genome 65393 2546356 Gloeothece citriformis PCC 7424 strain=PCC 7424 na latest Complete Genome Major Full 2008-12-17 ASM2182v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/825/GCF_000021825.1_ASM2182v1/ na assembly from type material na haploid bacteria 6554169 6554169 38.500000 7 7 7 NCBI RefSeq GCF_000021825.1-RS_2026_03_30 2026-03-30 5942 5763 59 na GCF_000021845.1 PRJNA224116 SAMN00000037 na na 440085 408 Methylorubrum extorquens CM4 strain=CM4 na latest Complete Genome Major Full 2008-12-19 ASM2184v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/845/GCF_000021845.1_ASM2184v1/ na assembly from heterotypic synonym type material na haploid bacteria 6180732 6180732 68.000000 3 3 3 NCBI RefSeq GCF_000021845.1-RS_2026_04_23 2026-04-23 5810 5561 80 22887658 GCF_000021865.1 PRJNA224116 SAMN02604080 na reference genome 272942 1061 Rhodobacter capsulatus SB 1003 strain=SB 1003 na latest Complete Genome Major Full 2010-04-09 ASM2186v1 Univ. Chicago GCA_000021865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/865/GCF_000021865.1_ASM2186v1/ na na na haploid bacteria 3871920 3871920 66.500000 2 2 2 NCBI RefSeq GCF_000021865.1-RS_2025_11_21 2025-11-21 3732 3618 69 20418398 GCF_000021885.1 PRJNA224116 SAMN02603313 na na 557723 738 Glaesserella parasuis SH0165 strain=SH0165 na latest Complete Genome Major Full 2009-01-07 ASM2188v1 Huazhong Agricultural University GCA_000021885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/885/GCF_000021885.1_ASM2188v1/ na na na haploid bacteria 2269156 2269156 40.000000 1 1 1 NCBI RefSeq GCF_000021885.1-RS_2026_02_24 2026-02-24 2315 2104 80 19074396;21611187 GCF_000021905.1 PRJNA224116 SAMN00000039 na reference genome 218208 218208 Desulfatibacillum aliphaticivorans strain=AK-1 na latest Complete Genome Major Full 2008-12-24 ASM2190v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/905/GCF_000021905.1_ASM2190v1/ na na na haploid bacteria 6517073 6517073 54.500000 1 1 1 NCBI RefSeq GCF_000021905.1-RS_2025_11_23 2025-11-23 5366 5265 67 21651686 GCF_000021925.1 PRJNA224116 SAMN02598433 na reference genome 272564 49338 Desulfitobacterium hafniense DCB-2 strain=DCB-2 na latest Complete Genome Major Full 2009-01-05 ASM2192v1 US DOE Joint Genome Institute GCA_000021925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/925/GCF_000021925.1_ASM2192v1/ na assembly from type material na haploid bacteria 5279134 5279134 47.500000 1 1 1 NCBI RefSeq GCF_000021925.1-RS_2026_03_27 2026-03-27 5032 4887 93 22316246 GCF_000021945.1 PRJNA224116 SAMN00623036 na reference genome 326427 152260 Chloroflexus aggregans DSM 9485 strain=DSM 9485 na latest Complete Genome Major Full 2009-01-05 ASM2194v1 US DOE Joint Genome Institute GCA_000021945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/945/GCF_000021945.1_ASM2194v1/ na assembly from type material na haploid bacteria 4684931 4684931 56.500000 1 1 1 NCBI RefSeq GCF_000021945.1-RS_2025_12_13 2025-12-13 3899 3812 59 na GCF_000021965.1 PRJNA224116 SAMN00001866 na reference genome 521011 475088 Methanosphaerula palustris E1-9c strain=E1-9c na latest Complete Genome Major Full 2009-01-05 ASM2196v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/965/GCF_000021965.1_ASM2196v1/ na assembly from type material na haploid archaea 2922917 2922917 55.500000 1 1 1 NCBI RefSeq GCF_000021965.1-RS_2025_11_21 2025-11-21 2909 2784 70 26543115 GCF_000021985.1 PRJNA224116 SAMN00001443 na reference genome 396588 1033854 Thioalkalivibrio sulfidiphilus HL-EbGr7 strain=HL-EbGR7 na latest Complete Genome Major Full 2009-01-13 ASM2198v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000021985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/021/985/GCF_000021985.1_ASM2198v1/ na assembly from type material na haploid bacteria 3464554 3464554 65.000000 1 1 1 NCBI RefSeq GCF_000021985.1-RS_2026_05_01 2026-05-01 3387 3298 52 21475584 GCF_000022005.1 PRJNA59307 SAMN02604151 na reference genome 565050 155892 Caulobacter vibrioides NA1000 strain=NA1000 na latest Complete Genome Major Full 2009-01-16 ASM2200v1 University of Chicago GCA_000022005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/005/GCF_000022005.1_ASM2200v1/ na na na haploid bacteria 4042929 4042929 67.000000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2020-12-10 4097 3886 211 20472802 GCF_000022025.1 PRJNA224116 SAMN00000051 na reference genome 452863 85085 Pseudarthrobacter chlorophenolicus A6 strain=A6 na latest Complete Genome Major Full 2009-01-09 ASM2202v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/025/GCF_000022025.1_ASM2202v1/ na assembly from type material na haploid bacteria 4980870 4980870 66.000000 3 3 3 NCBI RefSeq GCF_000022025.1-RS_2025_12_09 2025-12-09 4734 4581 108 na GCF_000022065.1 PRJNA224116 SAMN00623037 na reference genome 394503 1521 Ruminiclostridium cellulolyticum H10 strain=H10 na latest Complete Genome Major Full 2009-01-13 ASM2206v1 US DOE Joint Genome Institute GCA_000022065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/065/GCF_000022065.1_ASM2206v1/ na assembly from type material na haploid bacteria 4068724 4068724 37.500000 1 1 1 NCBI RefSeq GCF_000022065.1-RS_2026_04_07 2026-04-07 3555 3415 90 na GCF_000022085.1 PRJNA224116 SAMN00000043 na reference genome 460265 114616 Methylobacterium nodulans ORS 2060 strain=ORS 2060 na latest Complete Genome Major Full 2009-01-12 ASM2208v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/085/GCF_000022085.1_ASM2208v1/ na assembly from type material na haploid bacteria 8839022 8839022 68.500000 8 8 8 NCBI RefSeq GCF_000022085.1-RS_2026_04_23 2026-04-23 8725 8203 97 22887658 GCF_000022105.1 PRJNA224116 SAMN02603102 na na 565034 159 Brachyspira hyodysenteriae WA1 strain=WA1; ATCC 49526 na latest Complete Genome Major Full 2009-03-18 ASM2210v1 Centre for Comparative Genomics GCA_000022105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/105/GCF_000022105.1_ASM2210v1/ na na na haploid bacteria 3036634 3036634 27.000000 2 2 2 NCBI RefSeq GCF_000022105.1-RS_2026_03_31 2026-03-31 2651 2600 40 19262690 GCF_000022145.1 PRJNA224116 SAMN00000050 na reference genome 455488 161493 Anaeromyxobacter dehalogenans 2CP-1 strain=2CP1 na latest Complete Genome Major Full 2009-01-12 ASM2214v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/145/GCF_000022145.1_ASM2214v1/ na assembly from type material na haploid bacteria 5029329 5029329 74.500000 1 1 1 NCBI RefSeq GCF_000022145.1-RS_2026_05_01 2026-05-01 4582 4491 59 na GCF_000022165.1 PRJNA224116 SAMN02604137 na na 588858 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S strain=14028S na latest Complete Genome Major Full 2009-11-13 ASM2216v1 University of Arizona GCA_000022165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/165/GCF_000022165.1_ASM2216v1/ na na na haploid bacteria 4964097 4964097 52.000000 2 2 2 NCBI RefSeq GCF_000022165.1-RS_2025_03_23 2025-03-23 4868 4607 123 19897643 GCF_000022205.1 PRJNA224116 SAMN02598407 na reference genome 416348 2247 Halorubrum lacusprofundi ATCC 49239 strain=ATCC 49239 na latest Complete Genome Major Full 2009-02-04 ASM2220v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/205/GCF_000022205.1_ASM2220v1/ na assembly from type material na haploid archaea 3692576 3692576 64.000000 3 3 3 NCBI RefSeq GCF_000022205.1-RS_2026_04_06 2026-04-06 3702 3537 62 23320757;23536799;27617060;29109294;29189043;31463573 GCF_000022225.1 PRJNA224116 SAMN02604255 na na 544404 562 Escherichia coli O157:H7 str. TW14359 strain=TW14359 na latest Complete Genome Major Full 2009-07-23 ASM2222v1 University of Washington GCA_000022225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/225/GCF_000022225.1_ASM2222v1/ na na na haploid bacteria 5622737 5622737 50.500000 2 2 2 NCBI RefSeq GCF_000022225.1-RS_2025_04_26 2025-04-26 5683 5216 137 19564389 GCF_000022245.1 PRJNA224116 SAMN02603122 na na 591020 623 Shigella flexneri 2002017 strain=2002017 na latest Complete Genome Major Full 2009-12-24 ASM2224v1 Chinese Center for Disease Control and Prevention GCA_000022245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/245/GCF_000022245.1_ASM2224v1/ na na na haploid bacteria 4894492 4894492 50.500000 6 6 6 NCBI RefSeq GCF_000022245.1-RS_2025_02_03 2025-02-03 5012 4065 131 19955273 GCF_000022265.1 PRJNA224116 SAMN00623045 na reference genome 316067 1203471 Geotalea daltonii FRC-32 strain=FRC-32 na latest Complete Genome Major Full 2009-01-27 ASM2226v1 US DOE Joint Genome Institute GCA_000022265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/265/GCF_000022265.1_ASM2226v1/ na assembly from type material na haploid bacteria 4304501 4304501 53.500000 1 1 1 NCBI RefSeq GCF_000022265.1-RS_2025_12_10 2025-12-10 3868 3787 60 na GCF_000022285.1 PRJNA224116 SAMN02603205 na na 66084 66084 Wolbachia sp. wRi strain=wRi na latest Complete Genome Major Full 2009-03-24 ASM2228v1 Dept. of Molecular Evolution, Evolutionary GCA_000022285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/285/GCF_000022285.1_ASM2228v1/ na na na haploid bacteria 1445873 1445873 35.000000 1 1 1 NCBI RefSeq GCF_000022285.1-RS_2025_01_08 2025-01-08 1393 1254 42 19307581 GCF_000022305.1 PRJNA224116 SAMN00001444 na reference genome 535289 721785 [Acidovorax] ebreus TPSY strain=TPSY na latest Complete Genome Major Full 2009-01-27 ASM2230v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/305/GCF_000022305.1_ASM2230v1/ na assembly from type material na haploid bacteria 3796573 3796573 67.000000 1 1 1 NCBI RefSeq GCF_000022305.1-RS_2026_06_22 2026-06-22 3627 3509 66 20023012 GCF_000022325.1 PRJNA224116 SAMN02598462 na reference genome 521460 31899 Caldicellulosiruptor bescii DSM 6725 strain=DSM 6725 na latest Complete Genome Major Full 2009-02-04 ASM2232v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/325/GCF_000022325.1_ASM2232v1/ na assembly from type material na haploid bacteria 2931662 2931662 35.000000 3 3 3 NCBI RefSeq GCF_000022325.1-RS_2025_12_13 2025-12-13 2846 2652 61 na GCF_000022345.1 PRJNA224116 SAMN02603900 na na 595496 562 Escherichia coli BW2952 strain=K-12 substr. BW2952 na latest Complete Genome Major Full 2009-06-04 ASM2234v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000022345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/345/GCF_000022345.1_ASM2234v1/ na na na haploid bacteria 4578159 4578159 51.000000 1 1 1 NCBI RefSeq GCF_000022345.1-RS_2025_06_09 2025-06-09 4490 4191 123 19376874 GCF_000022365.1 PRJNA224116 SAMN02603333 na reference genome 593117 187878 Thermococcus gammatolerans EJ3 strain=EJ3; DSM 15229 na latest Complete Genome Major Full 2009-06-12 ASM2236v1 IGM/ Universit Paris-Sud, France GCA_000022365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/365/GCF_000022365.1_ASM2236v1/ na assembly from type material na haploid archaea 2045438 2045438 53.500000 1 1 1 NCBI RefSeq GCF_000022365.1-RS_2025_11_21 2025-11-21 2230 2167 52 19558674 GCF_000022385.1 PRJNA224116 SAMN02598420 na na 429572 43080 Saccharolobus islandicus L.S.2.15 strain=L.S.2.15 na latest Complete Genome Major Full 2009-04-24 ASM2238v1 US DOE Joint Genome Institute GCA_000022385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/385/GCF_000022385.1_ASM2238v1/ na na na haploid archaea 2736272 2736272 35.000000 1 1 1 NCBI RefSeq GCF_000022385.1-RS_2025_12_22 2025-12-22 3085 2827 51 19435847 GCF_000022405.1 PRJNA224116 SAMN02598416 na na 427317 43080 Saccharolobus islandicus M.14.25 strain=M.14.25 na latest Complete Genome Major Full 2009-04-24 ASM2240v1 US DOE Joint Genome Institute GCA_000022405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/405/GCF_000022405.1_ASM2240v1/ na na na haploid archaea 2608832 2608832 35.000000 1 1 1 NCBI RefSeq GCF_000022405.1-RS_2025_12_22 2025-12-22 2916 2694 51 19435847 GCF_000022425.1 PRJNA224116 SAMN02598417 na na 427318 43080 Saccharolobus islandicus M.16.27 strain=M.16.27 na latest Complete Genome Major Full 2009-04-29 ASM2242v1 US DOE Joint Genome Institute GCA_000022425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/425/GCF_000022425.1_ASM2242v1/ na na na haploid archaea 2692402 2692402 35.000000 1 1 1 NCBI RefSeq GCF_000022425.1-RS_2025_12_22 2025-12-22 2953 2736 51 19435847 GCF_000022445.1 PRJNA224116 SAMN02598414 na reference genome 426118 43080 Saccharolobus islandicus M.16.4 strain=M.16.4 na latest Complete Genome Major Full 2009-05-27 ASM2244v1 US DOE Joint Genome Institute GCA_000022445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/445/GCF_000022445.1_ASM2244v1/ na na na haploid archaea 2586647 2586647 35.000000 1 1 1 NCBI RefSeq GCF_000022445.1-RS_2025_12_22 2025-12-22 2869 2695 52 19435847 GCF_000022465.1 PRJNA224116 SAMN02598422 na na 439386 43080 Saccharolobus islandicus Y.G.57.14 strain=Y.G.57.14 na latest Complete Genome Major Full 2009-04-29 ASM2246v1 US DOE Joint Genome Institute GCA_000022465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/465/GCF_000022465.1_ASM2246v1/ na na na haploid archaea 2702058 2702058 35.500000 1 1 1 NCBI RefSeq GCF_000022465.1-RS_2025_12_22 2025-12-22 3052 2757 53 19435847 GCF_000022485.1 PRJNA224116 SAMN02598411 na na 419942 43080 Saccharolobus islandicus Y.N.15.51 strain=Y.N.15.51 na latest Complete Genome Major Full 2009-04-29 ASM2248v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000022485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/485/GCF_000022485.1_ASM2248v1/ na assembly designated as reftype na haploid archaea 2854410 2854410 35.500000 2 2 2 NCBI RefSeq GCF_000022485.1-RS_2025_12_22 2025-12-22 3255 2904 51 19435847 GCF_000022505.1 PRJNA224116 SAMN02603930 na na 572264 1396 Bacillus cereus 03BB102 strain=03BB102 na latest Complete Genome Major Full 2009-03-30 ASM2250v1 The J. Craig Venter Institute GCA_000022505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/505/GCF_000022505.1_ASM2250v1/ na na na haploid bacteria 5449308 5449308 35.500000 2 2 2 NCBI RefSeq GCF_000022505.1-RS_2025_08_25 2025-08-25 5673 5345 152 na GCF_000022525.1 PRJNA224116 SAMN02603947 na reference genome 434131 950 Neorickettsia risticii str. Illinois strain=Illinois na latest Complete Genome Major Full 2009-07-23 ASM2252v1 The Ohio State University GCA_000022525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/525/GCF_000022525.1_ASM2252v1/ na assembly from type material na haploid bacteria 879977 879977 41.500000 1 1 1 NCBI RefSeq GCF_000022525.1-RS_2026_01_08 2026-01-08 813 766 39 19661282 GCF_000022545.1 PRJNA224116 SAMN02603090 na reference genome 604354 172049 Thermococcus sibiricus MM 739 strain=MM 739 na latest Complete Genome Major Full 2009-06-29 ASM2254v1 Centre GCA_000022545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/545/GCF_000022545.1_ASM2254v1/ na assembly from type material na haploid archaea 1845800 1845800 40.000000 1 1 1 NCBI RefSeq GCF_000022545.1-RS_2025_11_21 2025-11-21 2052 1968 52 19447963 GCF_000022565.1 PRJNA224116 SAMN02603447 na reference genome 240015 33075 Acidobacterium capsulatum ATCC 51196 strain=ATCC 51196 na latest Complete Genome Major Full 2009-03-30 ASM2256v1 J. Craig Venter Institute GCA_000022565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/565/GCF_000022565.1_ASM2256v1/ na assembly from type material na haploid bacteria 4127356 4127356 60.500000 1 1 1 NCBI RefSeq GCF_000022565.1-RS_2026_03_27 2026-03-27 3416 3342 53 19201974 GCF_000022585.1 PRJNA224116 SAMN02603569 na na 593588 666 Vibrio cholerae MJ-1236 strain=MJ-1236 na latest Complete Genome Major Full 2009-05-04 ASM2258v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000022585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/585/GCF_000022585.1_ASM2258v1/ na na na haploid bacteria 4236368 4236368 47.500000 2 2 2 NCBI RefSeq GCF_000022585.1-RS_2026_02_14 2026-02-14 3901 3722 124 na GCF_000022605.2 PRJNA224116 SAMN02604249 na na 331104 624186 Blattabacterium sp. (Blattella germanica) str. Bge strain=Alboraia na latest Complete Genome Major Full 2011-06-17 ASM2260v1 University of Valencia GCA_000022605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/605/GCF_000022605.2_ASM2260v1/ na na na haploid bacteria 640935 640935 27.000000 2 2 2 NCBI RefSeq GCF_000022605.2-RS_2024_05_06 2024-05-06 632 585 39 19911043 GCF_000022625.1 PRJNA224116 SAMN02604296 na na 546272 29459 Brucella melitensis ATCC 23457 strain=ATCC 23457 na latest Complete Genome Major Full 2009-03-25 ASM2262v1 Virginia Bioinformatics Institute GCA_000022625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/625/GCF_000022625.1_ASM2262v1/ na na na haploid bacteria 3311219 3311219 57.000000 2 2 2 NCBI RefSeq GCF_000022625.1-RS_2026_04_01 2026-04-01 3244 3014 68 na GCF_000022645.2 PRJNA224116 SAMN02603166 na na 626418 337 Burkholderia glumae BGR1 strain=BGR1 na latest Complete Genome Major Full 2011-07-05 ASM2264v1 Crop Functional Genomics Center GCA_000022645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/645/GCF_000022645.2_ASM2264v1/ na na na haploid bacteria 7284636 7284636 68.000000 6 6 6 NCBI RefSeq GCF_000022645.2-RS_2025_09_05 2025-09-05 6633 6306 86 19329631 GCF_000022665.1 PRJNA224116 SAMN02603478 na na 469008 562 Escherichia coli BL21(DE3) strain=BL21(DE3) na latest Complete Genome Major Full 2010-05-17 ASM2266v1 Korea Research Institute of Bioscience and Biotechnology GCA_000022665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/665/GCF_000022665.1_ASM2266v1/ na na na haploid bacteria 4558953 4558953 51.000000 1 1 1 NCBI RefSeq GCF_000022665.1-RS_2025_03_23 2025-03-23 4449 4142 116 19786035 GCF_000022685.1 PRJNA224116 SAMN02604258 na na 272630 408 Methylorubrum extorquens AM1 strain=AM1 na latest Complete Genome Major Full 2009-06-17 ASM2268v1 University of Washington Genome Center GCA_000022685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/685/GCF_000022685.1_ASM2268v1/ na na na haploid bacteria 6879778 6879778 68.500000 5 5 5 NCBI RefSeq GCF_000022685.1-RS_2025_05_23 2025-05-23 6503 6256 83 19440302 GCF_000022705.1 PRJNA224116 SAMN02603172 na na 580050 28025 Bifidobacterium animalis subsp. lactis Bl-04 strain=Bl-04; ATCC SD5219 na latest Complete Genome Major Full 2009-06-19 ASM2270v1 Danisco USA Inc. GCA_000022705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/705/GCF_000022705.1_ASM2270v1/ na na na haploid bacteria 1938709 1938709 60.500000 1 1 1 NCBI RefSeq GCF_000022705.1-RS_2026_03_27 2026-03-27 1623 1538 67 19376856 GCF_000022725.1 PRJNA224116 SAMN02603206 na reference genome 634504 33045 Bartonella grahamii as4aup strain=as4aup na latest Complete Genome Major Full 2009-06-19 ASM2272v1 Dept. of Molecular Evolution, Uppsala University GCA_000022725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/725/GCF_000022725.1_ASM2272v1/ na na na haploid bacteria 2369520 2369520 38.000000 2 2 2 NCBI RefSeq GCF_000022725.1-RS_2026_03_30 2026-03-30 2010 1869 52 19578403 GCF_000022745.1 PRJNA224116 SAMN02603148 na reference genome 568815 444163 Brucella microti CCM 4915 strain=CCM 4915 na latest Complete Genome Major Full 2009-08-18 ASM2274v1 CNRS GCA_000022745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/745/GCF_000022745.1_ASM2274v1/ na assembly from type material na haploid bacteria 3337369 3337369 57.500000 2 2 2 NCBI RefSeq GCF_000022745.1-RS_2025_08_07 2025-08-07 3250 3094 68 19653890 GCF_000022765.1 PRJNA224116 SAMN02603540 na na 536232 1491 Clostridium botulinum A2 str. Kyoto strain=Kyoto na latest Complete Genome Major Full 2009-04-15 ASM2276v1 Los Alamos National Laboratory GCA_000022765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/765/GCF_000022765.1_ASM2276v1/ na na na haploid bacteria 4155278 4155278 28.000000 1 1 1 NCBI RefSeq GCF_000022765.1-RS_2026_04_24 2026-04-24 3969 3784 112 na GCF_000022785.1 PRJNA224116 SAMN02604077 na na 449216 782 Rickettsia prowazekii str. Rp22 strain=Rp22 na latest Complete Genome Major Full 2010-03-30 ASM2278v1 Unite des Rickettsies, CNRS, Marseille GCA_000022785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/785/GCF_000022785.1_ASM2278v1/ na na na haploid bacteria 1111612 1111612 29.000000 1 1 1 NCBI RefSeq GCF_000022785.1-RS_2026_01_08 2026-01-08 889 833 40 20368341 GCF_000022805.1 PRJNA224116 SAMN02603871 na na 637382 632 Yersinia pestis D106004 strain=D106004 na latest Complete Genome Major Full 2009-11-04 ASM2280v1 State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention GCA_000022805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/805/GCF_000022805.1_ASM2280v1/ na na na haploid bacteria 4812922 4812922 47.500000 4 4 4 NCBI RefSeq GCF_000022805.1-RS_2026_03_20 2026-03-20 4386 3944 100 19815893 GCF_000022845.1 PRJNA224116 SAMN02603873 na na 637386 632 Yersinia pestis Z176003 strain=Z176003 na latest Complete Genome Major Full 2010-04-08 ASM2284v1 State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000022845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/845/GCF_000022845.1_ASM2284v1/ na na na haploid bacteria 4725788 4725788 47.500000 4 4 4 NCBI RefSeq GCF_000022845.1-RS_2026_03_20 2026-03-20 4337 4020 98 20453098 GCF_000022865.1 PRJNA224116 SAMN02603932 na na 592021 1392 Bacillus anthracis str. A0248 strain=A0248 na latest Complete Genome Major Full 2009-05-01 ASM2286v1 The J. Craig Venter Institute GCA_000022865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/865/GCF_000022865.1_ASM2286v1/ na na na haploid bacteria 5503926 5503926 35.000000 3 3 3 NCBI RefSeq GCF_000022865.1-RS_2026_02_14 2026-02-14 5768 5233 133 na GCF_000022885.2 PRJNA224116 SAMN02603942 na na 634503 67780 Edwardsiella ictaluri 93-146 strain=93-146 na latest Complete Genome Major Full 2012-10-16 ASM2288v2 The Laboratory for Genomics and Microbiology GCA_000022885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/885/GCF_000022885.2_ASM2288v2/ na na na haploid bacteria 3812301 3812301 57.500000 1 1 1 NCBI RefSeq GCF_000022885.2-RS_2025_12_14 2025-12-14 3618 3266 124 22247535 GCF_000022905.1 PRJNA224116 SAMN02603064 na reference genome 548476 169292 Corynebacterium aurimucosum ATCC 700975 strain=DSM 44827; ATCC 700975 na latest Complete Genome Major Full 2009-04-24 ASM2290v1 Center for BioTechnology, Bielefeld University GCA_000022905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/905/GCF_000022905.1_ASM2290v1/ na assembly from heterotypic synonym type material na haploid bacteria 2819226 2819226 60.500000 2 2 2 NCBI RefSeq GCF_000022905.1-RS_2026_03_30 2026-03-30 2677 2551 69 20137072 GCF_000022925.1 PRJNA224116 SAMN02603721 na na 637381 1639 Listeria monocytogenes 08-5923 strain=Aug-23 na latest Complete Genome Major Full 2010-01-20 ASM2292v1 Public Health Agency of Canada GCA_000022925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/925/GCF_000022925.1_ASM2292v1/ na na na haploid bacteria 2999054 2999054 38.000000 1 1 1 NCBI RefSeq GCF_000022925.1-RS_2025_02_04 2025-02-04 3040 2936 77 20167121 GCF_000022965.1 PRJNA224116 SAMN02603171 na reference genome 555970 28025 Bifidobacterium animalis subsp. lactis DSM 10140 strain=DSM 10140 na latest Complete Genome Major Full 2009-06-19 ASM2296v1 Danisco USA Inc. GCA_000022965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/965/GCF_000022965.1_ASM2296v1/ na assembly from type material na haploid bacteria 1938483 1938483 60.500000 1 1 1 NCBI RefSeq GCF_000022965.1-RS_2025_12_11 2025-12-11 1623 1537 66 19376856 GCF_000022985.1 PRJNA224116 SAMN02602980 na na 634176 732 Aggregatibacter aphrophilus NJ8700 strain=NJ8700 na latest Complete Genome Major Full 2009-07-02 ASM2298v1 American Museum of Natural History GCA_000022985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/022/985/GCF_000022985.1_ASM2298v1/ na na na haploid bacteria 2313035 2313035 42.000000 1 1 1 NCBI RefSeq GCF_000022985.1-RS_2026_03_27 2026-03-27 2224 2053 81 19447908 GCF_000023005.1 PRJNA224116 SAMN02603146 na na 347255 35788 Rickettsia africae ESF-5 strain=ESF-5 na latest Complete Genome Major Full 2009-04-29 ASM2300v1 CNRS GCA_000023005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/005/GCF_000023005.1_ASM2300v1/ na na na haploid bacteria 1290917 1290917 32.500000 2 2 2 NCBI RefSeq GCF_000023005.1-RS_2025_01_08 2025-01-08 1493 1338 40 19379498 GCF_000023025.1 PRJNA224116 SAMN02603454 na na 377629 2426 Teredinibacter turnerae T7901 strain=T7901 na latest Complete Genome Major Full 2009-06-15 ASM2302v1 J. Craig Venter Institute GCA_000023025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/025/GCF_000023025.1_ASM2302v1/ na na na haploid bacteria 5193164 5193164 51.000000 1 1 1 NCBI RefSeq GCF_000023025.1-RS_2026_03_30 2026-03-30 4155 4076 53 19568419 GCF_000023045.1 PRJNA224116 SAMN02598453 na na 360911 360911 Exiguobacterium sp. AT1b strain=AT1b na latest Complete Genome Major Full 2009-05-05 ASM2304v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/045/GCF_000023045.1_ASM2304v1/ na na na haploid bacteria 2999895 2999895 48.500000 1 1 1 NCBI RefSeq GCF_000023045.1-RS_2024_08_22 2024-08-22 3118 3010 99 21460088 GCF_000023065.1 PRJNA224116 SAMN02598508 na reference genome 595494 43948 Tolumonas auensis DSM 9187 strain=DSM 9187 na latest Complete Genome Major Full 2009-05-13 ASM2306v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/065/GCF_000023065.1_ASM2306v1/ na assembly from type material na haploid bacteria 3471292 3471292 49.000000 1 1 1 NCBI RefSeq GCF_000023065.1-RS_2026_05_01 2026-05-01 3282 3150 121 22180815 GCF_000023085.1 PRJNA224116 SAMN02603864 na na 644042 1590 Lactiplantibacillus plantarum JDM1 strain=JDM1 na latest Complete Genome Major Full 2009-07-17 ASM2308v1 Shanghai Jiao Tong University School of Medicine GCA_000023085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/085/GCF_000023085.1_ASM2308v1/ na na na haploid bacteria 3197759 3197759 44.500000 1 1 1 NCBI RefSeq GCF_000023085.1-RS_2025_12_25 2025-12-25 3036 2912 82 19465650 GCF_000023105.1 PRJNA224116 SAMN02598436 na reference genome 471853 84757 Beutenbergia cavernae DSM 12333 strain=DSM 12333 na latest Complete Genome Major Full 2009-05-07 ASM2310v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/105/GCF_000023105.1_ASM2310v1/ na assembly from type material na haploid bacteria 4669183 4669183 73.000000 1 1 1 NCBI RefSeq GCF_000023105.1-RS_2026_05_01 2026-05-01 4286 4205 54 21304633 GCF_000023125.1 PRJNA224116 SAMN02598437 na reference genome 471854 94254 Dyadobacter fermentans DSM 18053 strain=DSM 18053 na latest Complete Genome Major Full 2009-07-31 ASM2312v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/125/GCF_000023125.1_ASM2312v1/ na assembly from type material na haploid bacteria 6967790 6967790 51.500000 1 1 1 NCBI RefSeq GCF_000023125.1-RS_2025_09_16 2025-09-16 5825 5756 52 21304649 GCF_000023145.1 PRJNA224116 SAMN02603033 na reference genome 645127 161879 Corynebacterium kroppenstedtii DSM 44385 strain=DSM 44385 na latest Complete Genome Major Full 2009-05-19 ASM2314v1 Bielefeld University, Center for Biotechnology GCA_000023145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/145/GCF_000023145.1_ASM2314v1/ na assembly from type material na haploid bacteria 2446804 2446804 57.500000 1 1 1 NCBI RefSeq GCF_000023145.1-RS_2025_08_12 2025-08-12 2112 2026 58 18430482 GCF_000023165.1 PRJNA224116 SAMN02603437 na na 436113 2102 Mycoplasma mycoides subsp. capri str. GM12 strain=GM12 na latest Complete Genome Major Full 2009-08-21 ASM2316v1 J. Craig Venter Institute GCA_000023165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/165/GCF_000023165.1_ASM2316v1/ na na na haploid bacteria 1089202 1089202 24.000000 1 1 1 NCBI RefSeq GCF_000023165.1-RS_2026_02_26 2026-02-26 905 853 39 na GCF_000023205.1 PRJNA224116 SAMN00000281 na na 465515 1270 Micrococcus luteus NCTC 2665 strain=NCTC 2665 (Fleming 2665) na latest Complete Genome Major Full 2009-06-12 ASM2320v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/205/GCF_000023205.1_ASM2320v1/ na assembly from type material na haploid bacteria 2501097 2501097 73.000000 1 1 1 NCBI RefSeq GCF_000023205.1-RS_2025_08_21 2025-08-21 2344 2230 57 na GCF_000023225.1 PRJNA224116 SAMN00002602 na reference genome 525897 899 Desulfomicrobium baculatum DSM 4028 strain=DSM 4028 na latest Complete Genome Major Full 2009-08-26 ASM2322v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/225/GCF_000023225.1_ASM2322v1/ na assembly from type material na haploid bacteria 3942657 3942657 58.500000 1 1 1 NCBI RefSeq GCF_000023225.1-RS_2026_07_03 2026-07-03 3537 3453 76 21304634 GCF_000023245.1 PRJNA224116 SAMN00001904 na reference genome 446462 40567 Actinosynnema mirum DSM 43827 strain=DSM 43827 na latest Complete Genome Major Full 2009-08-13 ASM2324v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/245/GCF_000023245.1_ASM2324v1/ na assembly from type material na haploid bacteria 8248144 8248144 73.500000 1 1 1 NCBI RefSeq GCF_000023245.1-RS_2026_05_01 2026-05-01 7164 6986 76 21304636 GCF_000023265.1 PRJNA224116 SAMN02598466 na reference genome 525909 53635 Acidimicrobium ferrooxidans DSM 10331 strain=DSM 10331 na latest Complete Genome Major Full 2009-08-18 ASM2326v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/265/GCF_000023265.1_ASM2326v1/ na assembly from type material na haploid bacteria 2158157 2158157 68.500000 1 1 1 NCBI RefSeq GCF_000023265.1-RS_2026_05_01 2026-05-01 2108 2020 55 21304635 GCF_000023285.1 PRJNA224116 SAMN00001911 na reference genome 521097 1018 Capnocytophaga ochracea DSM 7271 strain=DSM 7271 na latest Complete Genome Major Full 2009-08-26 ASM2328v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/285/GCF_000023285.1_ASM2328v1/ na assembly from type material na haploid bacteria 2612925 2612925 39.500000 1 1 1 NCBI RefSeq GCF_000023285.1-RS_2025_12_11 2025-12-11 2251 2165 62 21304645 GCF_000023305.1 PRJNA224116 SAMN02604230 na na 510831 263 Francisella tularensis subsp. tularensis NE061598 strain=NE061598 na latest Complete Genome Major Full 2009-12-28 ASM2330v1 University of Nebraska GCA_000023305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/305/GCF_000023305.1_ASM2330v1/ na na na haploid bacteria 1892681 1892681 32.500000 1 1 1 NCBI RefSeq GCF_000023305.1-RS_2026_06_11 2026-06-11 1946 1726 52 20140244 GCF_000023325.1 PRJNA224116 SAMN00001868 na reference genome 521045 651457 Kosmotoga olearia TBF 19.5.1 strain=TBF 19.5.1 na latest Complete Genome Major Full 2009-06-08 ASM2332v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/325/GCF_000023325.1_ASM2332v1/ na assembly from type material na haploid bacteria 2302126 2302126 41.500000 1 1 1 NCBI RefSeq GCF_000023325.1-RS_2026_03_20 2026-03-20 2190 2111 55 21914881 GCF_000023365.1 PRJNA224116 SAMN02598470 na na 536056 562 Escherichia coli DH1 strain=DH1 na latest Complete Genome Major Full 2009-10-05 ASM2336v1 US DOE Joint Genome Institute GCA_000023365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/365/GCF_000023365.1_ASM2336v1/ na na na haploid bacteria 4630707 4630707 51.000000 1 1 1 NCBI RefSeq GCF_000023365.1-RS_2025_06_13 2025-06-13 4506 4187 122 na GCF_000023445.1 PRJNA224116 SAMN00001870 na reference genome 526222 880 Maridesulfovibrio salexigens DSM 2638 strain=DSM 2638 na latest Complete Genome Major Full 2009-06-26 ASM2344v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/445/GCF_000023445.1_ASM2344v1/ na assembly from type material na haploid bacteria 4289847 4289847 47.000000 1 1 1 NCBI RefSeq GCF_000023445.1-RS_2026_05_01 2026-05-01 3934 3811 108 na GCF_000023465.1 PRJNA224116 SAMN02603855 na reference genome 655815 398743 Zunongwangia profunda SM-A87 strain=SMA-87 na latest Complete Genome Major Full 2010-04-21 ASM2346v1 ShanDong University GCA_000023465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/465/GCF_000023465.1_ASM2346v1/ na assembly from type material na haploid bacteria 5128187 5128187 36.000000 1 1 1 NCBI RefSeq GCF_000023465.1-RS_2025_12_11 2025-12-11 4505 4391 60 20398413 GCF_000023545.1 PRJNA224116 SAMN02598494 na reference genome 579405 69223 Musicola paradisiaca Ech703 strain=Ech703 na latest Complete Genome Major Full 2009-06-26 ASM2354v1 US DOE Joint Genome Institute GCA_000023545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/545/GCF_000023545.1_ASM2354v1/ na na na haploid bacteria 4679450 4679450 55.000000 1 1 1 NCBI RefSeq GCF_000023545.1-RS_2025_11_23 2025-11-23 4109 3952 101 na GCF_000023565.1 PRJNA224116 SAMN02598480 na reference genome 561229 556 Dickeya chrysanthemi Ech1591 strain=Ech1591 na latest Complete Genome Major Full 2009-07-02 ASM2356v1 US DOE Joint Genome Institute GCA_000023565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/565/GCF_000023565.1_ASM2356v1/ na na na haploid bacteria 4813854 4813854 54.500000 1 1 1 NCBI RefSeq GCF_000023565.1-RS_2026_04_23 2026-04-23 4318 4144 105 na GCF_000023585.1 PRJNA224116 SAMN00000047 na na 324057 324057 Paenibacillus sp. JDR-2 strain=JDR-2 na latest Complete Genome Major Full 2009-07-02 ASM2358v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/585/GCF_000023585.1_ASM2358v1/ na na na haploid bacteria 7184930 7184930 50.500000 1 1 1 NCBI RefSeq GCF_000023585.1-RS_2025_02_19 2025-02-19 6376 6213 126 22675593 GCF_000023605.1 PRJNA224116 SAMN02598478 na na 561230 554 Pectobacterium carotovorum subsp. carotovorum PC1 strain=PC1 na latest Complete Genome Major Full 2009-07-07 ASM2360v1 US DOE Joint Genome Institute GCA_000023605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/605/GCF_000023605.1_ASM2360v1/ na na na haploid bacteria 4862913 4862913 52.000000 1 1 1 NCBI RefSeq GCF_000023605.1-RS_2025_03_12 2025-03-12 4369 4221 108 na GCF_000023625.1 PRJNA224116 SAMN00763683 na na 478434 1773 Mycobacterium tuberculosis KZN 1435 strain=KZN MDR na latest Complete Genome Major Full 2009-07-09 ASM2362v1 Broad Institute GCA_000023625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/625/GCF_000023625.1_ASM2362v1/ na na na haploid bacteria 4398250 4398250 65.500000 1 1 1 NCBI RefSeq GCF_000023625.1-RS_2025_06_30 2025-06-30 4150 3899 51 na GCF_000023665.1 PRJNA224116 SAMN00002656 na na 866768 562 Escherichia coli 'BL21-Gold(DE3)pLysS AG' strain=BL21-Gold(DE3)pLysS AG na latest Complete Genome Major Full 2009-07-09 ASM2366v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/665/GCF_000023665.1_ASM2366v1/ na na na haploid bacteria 4570938 4570938 51.000000 1 1 1 NCBI RefSeq GCF_000023665.1-RS_2025_06_14 2025-06-14 4480 4160 116 na GCF_000023685.1 PRJNA224116 SAMN02603459 na na 436113 2102 Mycoplasma mycoides subsp. capri str. GM12 strain=GM12 na latest Complete Genome Major Full 2009-08-21 ASM2368v1 JCVI GCA_000023685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/685/GCF_000023685.1_ASM2368v1/ na na na haploid bacteria 1084586 1084586 24.000000 1 1 1 NCBI RefSeq GCF_000023685.1-RS_2025_08_05 2025-08-05 900 850 39 19696314 GCF_000023705.1 PRJNA224116 SAMN00017443 na reference genome 583345 359408 Methylotenera mobilis JLW8 strain=JLW8 na latest Complete Genome Major Full 2009-07-15 ASM2370v1 US DOE Joint Genome Institute GCA_000023705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/705/GCF_000023705.1_ASM2370v1/ na assembly from type material na haploid bacteria 2547570 2547570 45.500000 1 1 1 NCBI RefSeq GCF_000023705.1-RS_2026_03_27 2026-03-27 2384 2325 55 21622745 GCF_000023745.1 PRJNA224116 SAMN02598498 na reference genome 582744 266009 Methylovorus glucosotrophus SIP3-4 strain=SIP3-4 na latest Complete Genome Major Full 2009-07-15 ASM2374v1 US DOE Joint Genome Institute GCA_000023745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/745/GCF_000023745.1_ASM2374v1/ na na na haploid bacteria 3082007 3082007 54.500000 3 3 3 NCBI RefSeq GCF_000023745.1-RS_2025_08_18 2025-08-18 2960 2898 58 21622745 GCF_000023765.2 PRJNA224116 SAMN02603311 na na 537021 34021 Candidatus Liberibacter asiaticus str. psy62 strain=psy62 na latest Complete Genome Major Full 2011-08-02 ASM2376v2 Horticultural Research Laboratory, USDA-ARS GCA_000023765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/765/GCF_000023765.2_ASM2376v2/ na na na haploid bacteria 1227328 1227328 36.500000 1 1 1 NCBI RefSeq GCF_000023765.2-RS_2026_04_23 2026-04-23 1118 1034 56 19589076;21784907 GCF_000023785.1 PRJNA224116 SAMN02598497 na reference genome 582402 2724 Hirschia baltica ATCC 49814 strain=ATCC 49814 na latest Complete Genome Major Full 2009-07-17 ASM2378v1 US DOE Joint Genome Institute GCA_000023785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/785/GCF_000023785.1_ASM2378v1/ na assembly from type material na haploid bacteria 3540114 3540114 45.000000 2 2 2 NCBI RefSeq GCF_000023785.1-RS_2025_12_10 2025-12-10 3241 3178 48 22675580 GCF_000023805.1 PRJNA224116 SAMN02603357 na na 684950 210 Helicobacter pylori 52 strain=52 na latest Complete Genome Major Full 2009-10-21 ASM2380v1 Gyeongsang National University College of Medicine and 21c Frontier Human Genome Functional Research Project GCA_000023805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/805/GCF_000023805.1_ASM2380v1/ na na na haploid bacteria 1568826 1568826 39.000000 1 1 1 NCBI RefSeq GCF_000023805.1-RS_2026_01_10 2026-01-10 1513 1372 45 na GCF_000023825.1 PRJNA224116 SAMN02598456 na reference genome 485917 984 Pedobacter heparinus DSM 2366 strain=DSM 2366 na latest Complete Genome Major Full 2009-08-05 ASM2382v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/825/GCF_000023825.1_ASM2382v1/ na assembly from type material na haploid bacteria 5167383 5167383 42.000000 1 1 1 NCBI RefSeq GCF_000023825.1-RS_2026_03_30 2026-03-30 4290 4226 58 21304637 GCF_000023845.1 PRJNA224116 SAMN02598434 na reference genome 469378 84163 Cryptobacterium curtum DSM 15641 strain=DSM 15641 na latest Complete Genome Major Full 2009-08-26 ASM2384v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/845/GCF_000023845.1_ASM2384v1/ na assembly from type material na haploid bacteria 1617804 1617804 51.000000 1 1 1 NCBI RefSeq GCF_000023845.1-RS_2026_05_01 2026-05-01 1407 1344 60 21304644 GCF_000023865.1 PRJNA224116 SAMN02598440 na reference genome 471857 1852 Saccharomonospora viridis DSM 43017 strain=DSM 43017 na latest Complete Genome Major Full 2009-08-26 ASM2386v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/865/GCF_000023865.1_ASM2386v1/ na assembly from type material na haploid bacteria 4308349 4308349 67.500000 1 1 1 NCBI RefSeq GCF_000023865.1-RS_2026_03_30 2026-03-30 3966 3867 59 21304650 GCF_000023885.1 PRJNA224116 SAMN02598438 na na 471855 84110 Slackia heliotrinireducens DSM 20476 strain=DSM 20476 na latest Complete Genome Major Full 2009-08-28 ASM2388v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/885/GCF_000023885.1_ASM2388v1/ na assembly from type material na haploid bacteria 3165038 3165038 60.000000 1 1 1 NCBI RefSeq GCF_000023885.1-RS_2026_03_24 2026-03-24 2828 2752 58 21304663 GCF_000023905.1 PRJNA224116 SAMN00002593 na reference genome 523794 40542 Leptotrichia buccalis C-1013-b strain=DSM 1135 na latest Complete Genome Major Full 2009-09-01 ASM2390v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/905/GCF_000023905.1_ASM2390v1/ na assembly from type material na haploid bacteria 2465610 2465610 29.500000 1 1 1 NCBI RefSeq GCF_000023905.1-RS_2026_03_30 2026-03-30 2364 2275 65 21304648 GCF_000023925.1 PRJNA224116 SAMN02598443 na na 478801 1276 Kytococcus sedentarius DSM 20547 strain=DSM 20547 na latest Complete Genome Major Full 2009-08-27 ASM2392v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/925/GCF_000023925.1_ASM2392v1/ na assembly from type material na haploid bacteria 2785024 2785024 71.500000 1 1 1 NCBI RefSeq GCF_000023925.1-RS_2025_08_18 2025-08-18 2684 2559 56 21304632 GCF_000023945.1 PRJNA224116 SAMN00002611 na reference genome 519442 146826 Halorhabdus utahensis DSM 12940 strain=DSM 12940 na latest Complete Genome Major Full 2009-08-27 ASM2394v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/945/GCF_000023945.1_ASM2394v1/ na assembly from type material na haploid archaea 3116795 3116795 63.000000 1 1 1 NCBI RefSeq GCF_000023945.1-RS_2025_11_21 2025-11-21 3067 2980 51 21304660 GCF_000023965.1 PRJNA224116 SAMN00002610 na reference genome 485914 57705 Halomicrobium mukohataei DSM 12286 strain=DSM 12286 na latest Complete Genome Major Full 2009-09-03 ASM2396v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/965/GCF_000023965.1_ASM2396v1/ na assembly from type material na haploid archaea 3332349 3332349 65.500000 2 2 2 NCBI RefSeq GCF_000023965.1-RS_2025_12_02 2025-12-02 3454 3331 58 21304667 GCF_000023985.1 PRJNA224116 SAMN02598490 na reference genome 573064 83171 Methanocaldococcus fervens AG86 strain=AG86 na latest Complete Genome Major Full 2009-08-28 ASM2398v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000023985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/023/985/GCF_000023985.1_ASM2398v1/ na assembly from type material na haploid archaea 1507251 1507251 32.000000 2 2 2 NCBI RefSeq GCF_000023985.1-RS_2025_11_20 2025-11-20 1662 1593 45 na GCF_000024005.1 PRJNA224116 SAMN00001914 na reference genome 485918 79329 Chitinophaga pinensis DSM 2588 strain=DSM 2588 na latest Complete Genome Major Full 2009-08-19 ASM2400v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/005/GCF_000024005.1_ASM2400v1/ na assembly from type material na haploid bacteria 9127347 9127347 45.000000 1 1 1 NCBI RefSeq GCF_000024005.1-RS_2026_01_19 2026-01-19 7213 7091 92 21304681 GCF_000024025.1 PRJNA224116 SAMN02598445 na reference genome 479433 304895 Catenulispora acidiphila DSM 44928 strain=DSM 44928 na latest Complete Genome Major Full 2009-08-21 ASM2402v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/025/GCF_000024025.1_ASM2402v1/ na assembly from type material na haploid bacteria 10467782 10467782 70.000000 1 1 1 NCBI RefSeq GCF_000024025.1-RS_2025_11_23 2025-11-23 9138 8928 72 21304647 GCF_000024065.1 PRJNA224116 SAMN02598439 na na 471856 43674 Jonesia denitrificans DSM 20603 strain=DSM 20603 na latest Complete Genome Major Full 2009-08-27 ASM2406v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/065/GCF_000024065.1_ASM2406v1/ na assembly from type material na haploid bacteria 2749646 2749646 58.500000 1 1 1 NCBI RefSeq GCF_000024065.1-RS_2026_01_15 2026-01-15 2582 2487 74 21304666 GCF_000024085.1 PRJNA224116 SAMN00002604 na reference genome 523791 261964 Kangiella koreensis DSM 16069 strain=DSM 16069 na latest Complete Genome Major Full 2009-08-28 ASM2408v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/085/GCF_000024085.1_ASM2408v1/ na assembly from type material na haploid bacteria 2852073 2852073 43.500000 1 1 1 NCBI RefSeq GCF_000024085.1-RS_2025_12_10 2025-12-10 2668 2601 52 21304661 GCF_000024105.1 PRJNA224116 SAMN00001908 na reference genome 525919 33034 Anaerococcus prevotii DSM 20548 strain=DSM 20548 na latest Complete Genome Major Full 2009-08-28 ASM2410v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/105/GCF_000024105.1_ASM2410v1/ na assembly from type material na haploid bacteria 1998633 1998633 35.500000 2 2 2 NCBI RefSeq GCF_000024105.1-RS_2026_03_30 2026-03-30 1917 1833 63 21304652 GCF_000024125.1 PRJNA224116 SAMN02603916 na reference genome 313596 252307 Robiginitalea biformata HTCC2501 strain=HTCC2501 na latest Complete Genome Major Full 2009-09-11 ASM2412v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000024125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/125/GCF_000024125.1_ASM2412v1/ na assembly from type material na haploid bacteria 3530383 3530383 55.500000 1 1 1 NCBI RefSeq GCF_000024125.1-RS_2025_12_11 2025-12-11 3147 3091 51 19767438 GCF_000024145.1 PRJNA224116 SAMN02604061 na na 406984 83558 Chlamydia pneumoniae LPCoLN strain=LPCoLN na latest Complete Genome Major Full 2009-11-20 ASM2414v1 TIGR GCA_000024145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/145/GCF_000024145.1_ASM2414v1/ na na na haploid bacteria 1248550 1248550 40.500000 2 2 2 NCBI RefSeq GCF_000024145.1-RS_2026_02_06 2026-02-06 1076 1023 44 19749045 GCF_000024165.1 PRJNA224116 SAMN02598465 na reference genome 327160 327160 Candidatus Accumulibacter phosphatis strain=UW-1 na latest Complete Genome Major Full 2009-09-01 ASM2416v1 US DOE Joint Genome Institute GCA_000024165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/165/GCF_000024165.1_ASM2416v1/ na assembly from type material na haploid bacteria 5306133 5306133 64.000000 4 4 4 NCBI RefSeq GCF_000024165.1-RS_2025_12_05 2025-12-05 4761 4587 59 na GCF_000024185.1 PRJNA224116 SAMN02603710 na reference genome 634498 83816 Methanobrevibacter ruminantium M1 strain=M1 na latest Complete Genome Major Full 2010-02-05 ASM2418v1 Pastoral Greenhouse Gas Research Consortium GCA_000024185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/185/GCF_000024185.1_ASM2418v1/ na assembly from type material na haploid archaea 2937203 2937203 32.500000 1 1 1 NCBI RefSeq GCF_000024185.1-RS_2025_11_20 2025-11-20 2287 2203 63 20126622 GCF_000024205.1 PRJNA224116 SAMN02598455 na reference genome 485916 58138 Desulfofarcimen acetoxidans DSM 771 strain=DSM 771 na latest Complete Genome Major Full 2009-09-10 ASM2420v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/205/GCF_000024205.1_ASM2420v1/ na assembly from type material na haploid bacteria 4545624 4545624 41.500000 1 1 1 NCBI RefSeq GCF_000024205.1-RS_2026_04_07 2026-04-07 4411 4188 103 21304664 GCF_000024225.1 PRJNA224116 SAMN00001907 na reference genome 521095 1382 Lancefieldella parvula DSM 20469 strain=DSM 20469 na latest Complete Genome Major Full 2009-09-09 ASM2422v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/225/GCF_000024225.1_ASM2422v1/ na assembly from type material na haploid bacteria 1543805 1543805 45.500000 1 1 1 NCBI RefSeq GCF_000024225.1-RS_2026_05_01 2026-05-01 1410 1358 51 21304653 GCF_000024245.1 PRJNA224116 SAMN00113486 na na 622759 542 Zymomonas mobilis subsp. mobilis NCIMB 11163 strain=NCIB 11163 na latest Complete Genome Major Full 2009-09-15 ASM2424v1 US DOE Joint Genome Institute GCA_000024245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/245/GCF_000024245.1_ASM2424v1/ na na na haploid bacteria 2223520 2223520 46.500000 4 4 4 NCBI RefSeq GCF_000024245.1-RS_2025_07_04 2025-07-04 1963 1876 63 19767433 GCF_000024265.1 PRJNA224116 SAMN00002594 na na 479437 84112 Eggerthella lenta DSM 2243 strain=DSM 2243 na latest Complete Genome Major Full 2009-09-09 ASM2426v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/265/GCF_000024265.1_ASM2426v1/ na assembly from type material na haploid bacteria 3632260 3632260 64.000000 1 1 1 NCBI RefSeq GCF_000024265.1-RS_2026_03_24 2026-03-24 3169 3091 61 21304654 GCF_000024285.1 PRJNA224116 SAMN00001901 na reference genome 521098 405212 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 strain=DSM 446 na latest Complete Genome Major Full 2009-09-09 ASM2428v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/285/GCF_000024285.1_ASM2428v1/ na assembly from type material na haploid bacteria 3205686 3205686 62.000000 4 4 4 NCBI RefSeq GCF_000024285.1-RS_2025_11_20 2025-11-20 3219 3081 84 21304673 GCF_000024305.1 PRJNA224116 SAMN02598413 na na 425944 43080 Saccharolobus islandicus L.D.8.5 strain=L.D.8.5 na latest Chromosome Major Full 2010-01-22 ASM2430v1 US DOE Joint Genome Institute GCA_000024305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/305/GCF_000024305.1_ASM2430v1/ na na na haploid archaea 2748647 2748637 35.500000 2 2 3 NCBI RefSeq GCF_000024305.1-RS_2025_12_22 2025-12-22 3107 2831 51 na GCF_000024325.1 PRJNA224116 SAMN02598459 na reference genome 485915 45663 Desulfohalobium retbaense DSM 5692 strain=DSM 5692 na latest Complete Genome Major Full 2009-09-11 ASM2432v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/325/GCF_000024325.1_ASM2432v1/ na assembly from type material na haploid bacteria 2909567 2909567 57.500000 2 2 2 NCBI RefSeq GCF_000024325.1-RS_2026_04_21 2026-04-21 2538 2463 60 21304676 GCF_000024345.1 PRJNA224116 SAMN02598447 na reference genome 479435 182640 Kribbella flavida DSM 17836 strain=DSM 17836 na latest Complete Genome Major Full 2010-01-13 ASM2434v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/345/GCF_000024345.1_ASM2434v1/ na assembly from type material na haploid bacteria 7579488 7579488 70.500000 1 1 1 NCBI RefSeq GCF_000024345.1-RS_2026_03_20 2026-03-20 7153 7036 62 21304701 GCF_000024365.1 PRJNA224116 SAMN02598467 na reference genome 479431 53461 Nakamurella multipartita DSM 44233 strain=DSM 44233 na latest Complete Genome Major Full 2009-09-15 ASM2436v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/365/GCF_000024365.1_ASM2436v1/ na assembly from type material na haploid bacteria 6060298 6060298 71.000000 1 1 1 NCBI RefSeq GCF_000024365.1-RS_2025_12_10 2025-12-10 5514 5283 56 21304699 GCF_000024385.1 PRJNA224116 SAMN02598435 na reference genome 471852 2020 Thermomonospora curvata DSM 43183 strain=DSM 43183 na latest Complete Genome Major Full 2009-11-16 ASM2438v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/385/GCF_000024385.1_ASM2438v1/ na assembly from type material na haploid bacteria 5639016 5639016 71.500000 1 1 1 NCBI RefSeq GCF_000024385.1-RS_2026_05_01 2026-05-01 5022 4906 76 21475583 GCF_000024405.1 PRJNA224116 SAMN02598468 na reference genome 526218 826 Sebaldella termitidis ATCC 33386 strain=ATCC 33386 na latest Complete Genome Major Full 2009-11-18 ASM2440v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/405/GCF_000024405.1_ASM2440v1/ na assembly from type material na haploid bacteria 4486650 4486650 33.500000 3 3 3 NCBI RefSeq GCF_000024405.1-RS_2026_04_23 2026-04-23 4269 4193 57 21304705 GCF_000024425.1 PRJNA224116 SAMN00002601 na reference genome 504728 277 Meiothermus ruber DSM 1279 strain=DSM 1279 na latest Complete Genome Major Full 2010-03-03 ASM2442v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/425/GCF_000024425.1_ASM2442v1/ na assembly from type material na haploid bacteria 3097457 3097457 63.500000 1 1 1 NCBI RefSeq GCF_000024425.1-RS_2026_04_23 2026-04-23 3131 3047 56 21304689 GCF_000024445.1 PRJNA224116 SAMN02603177 na na 401473 1689 Bifidobacterium dentium Bd1 strain=Bd1 na latest Complete Genome Major Full 2010-01-05 ASM2444v1 Department of Genetics, Anthropology and Evolution, University of Parma, Parma, Italy GCA_000024445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/445/GCF_000024445.1_ASM2444v1/ na na na haploid bacteria 2636367 2636367 58.500000 1 1 1 NCBI RefSeq GCF_000024445.1-RS_2026_02_24 2026-02-24 2203 2105 72 20041198 GCF_000024465.1 PRJNA224116 SAMN02603472 na reference genome 488538 767892 Candidatus Puniceispirillum marinum IMCC1322 strain=IMCC1322 na latest Complete Genome Major Full 2010-03-31 ASM2446v1 KORDI/Inha Univ GCA_000024465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/465/GCF_000024465.1_ASM2446v1/ na assembly from type material na haploid bacteria 2753527 2753527 49.000000 1 1 1 NCBI RefSeq GCF_000024465.1-RS_2025_12_11 2025-12-11 2608 2558 43 20382761 GCF_000024485.1 PRJNA224116 SAMN02604256 na na 666714 160 Treponema pallidum subsp. pallidum str. Chicago strain=Chicago na latest Chromosome Major Full 2010-03-15 ASM2448v1 University of Washington GCA_000024485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/485/GCF_000024485.1_ASM2448v1/ na na na haploid bacteria 1139281 1138861 53.000000 1 1 8 NCBI RefSeq GCF_000024485.1-RS_2025_07_04 2025-07-04 1045 982 54 20348263 GCF_000024505.1 PRJNA224116 SAMN02604279 na reference genome 574556 769 Anaplasma centrale str. Israel strain=Israel na latest Complete Genome Major Full 2009-11-24 ASM2450v1 USDA-ARS GCA_000024505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/505/GCF_000024505.1_ASM2450v1/ na assembly designated as reftype na haploid bacteria 1206806 1206806 50.000000 1 1 1 NCBI RefSeq GCF_000024505.1-RS_2026_01_08 2026-01-08 999 934 44 19854912 GCF_000024525.1 PRJNA224116 SAMN00002598 na reference genome 504472 108 Spirosoma linguale DSM 74 strain=DSM 74 na latest Complete Genome Major Full 2010-01-13 ASM2452v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/525/GCF_000024525.1_ASM2452v1/ na assembly from type material na haploid bacteria 8491258 8491258 50.000000 9 9 9 NCBI RefSeq GCF_000024525.1-RS_2026_04_24 2026-04-24 7032 6934 62 21304700 GCF_000024545.1 PRJNA224116 SAMN02598427 na reference genome 446470 283811 Stackebrandtia nassauensis DSM 44728 strain=DSM 44728 na latest Complete Genome Major Full 2010-03-05 ASM2454v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/545/GCF_000024545.1_ASM2454v1/ na assembly from type material na haploid bacteria 6841557 6841557 68.000000 1 1 1 NCBI RefSeq GCF_000024545.1-RS_2026_04_23 2026-04-23 6569 6375 55 21304662 GCF_000024565.1 PRJNA224116 SAMN00002603 na reference genome 519441 34105 Streptobacillus moniliformis DSM 12112 strain=DSM 12112 na latest Complete Genome Major Full 2009-11-16 ASM2456v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/565/GCF_000024565.1_ASM2456v1/ na assembly from type material na haploid bacteria 1673280 1673280 26.500000 2 2 2 NCBI RefSeq GCF_000024565.1-RS_2025_12_10 2025-12-10 1578 1502 58 21304670 GCF_000024585.1 PRJNA224116 SAMN02604165 na na 681288 1280 Staphylococcus aureus subsp. aureus ED98 strain=ED98 na latest Complete Genome Major Full 2009-10-27 ASM2458v1 University of Edinburgh GCA_000024585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/585/GCF_000024585.1_ASM2458v1/ na na na haploid bacteria 2847542 2847542 33.000000 4 4 4 NCBI RefSeq GCF_000024585.1-RS_2025_04_26 2025-04-26 2848 2691 80 19884497 GCF_000024605.1 PRJNA224116 SAMN02598268 na reference genome 429009 42838 Ammonifex degensii KC4 strain=KC4 na latest Complete Genome Major Full 2009-10-08 ASM2460v1 US DOE Joint Genome Institute GCA_000024605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/605/GCF_000024605.1_ASM2460v1/ na assembly from type material na haploid bacteria 2157067 2157067 59.500000 2 2 2 NCBI RefSeq GCF_000024605.1-RS_2026_04_14 2026-04-14 2265 2164 57 na GCF_000024625.1 PRJNA224116 SAMN02598493 na reference genome 579137 73913 Methanocaldococcus vulcanius M7 strain=M7 na latest Complete Genome Major Full 2009-10-15 ASM2462v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/625/GCF_000024625.1_ASM2462v1/ na assembly from type material na haploid archaea 1761737 1761737 31.500000 3 3 3 NCBI RefSeq GCF_000024625.1-RS_2025_11_21 2025-11-21 1779 1720 45 na GCF_000024645.1 PRJNA224116 SAMN02598479 na na 561231 1905730 Pectobacterium parmentieri WPP163 strain=WPP163 na latest Complete Genome Major Full 2009-10-20 ASM2464v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/645/GCF_000024645.1_ASM2464v1/ na na na haploid bacteria 5063892 5063892 50.500000 1 1 1 NCBI RefSeq GCF_000024645.1-RS_2026_02_15 2026-02-15 4654 4428 108 na GCF_000024665.1 PRJNA224116 SAMN02598491 na na 59374 833 Fibrobacter succinogenes subsp. succinogenes S85 strain=S85 na latest Complete Genome Major Full 2009-10-15 ASM2466v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/665/GCF_000024665.1_ASM2466v1/ na assembly from type material na haploid bacteria 3842635 3842635 48.000000 1 1 1 NCBI RefSeq GCF_000024665.1-RS_2026_03_30 2026-03-30 3169 3088 70 na GCF_000024685.1 PRJNA224116 SAMN00191238 na na 481743 481743 Paenibacillus sp. Y412MC10 strain=Y412MC10 na latest Complete Genome Major Full 2009-10-14 ASM2468v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/685/GCF_000024685.1_ASM2468v1/ na na na haploid bacteria 7121665 7121665 51.000000 1 1 1 NCBI RefSeq GCF_000024685.1-RS_2024_12_31 2024-12-31 6385 6228 101 23408395 GCF_000024725.1 PRJNA224116 SAMN02598510 na reference genome 472759 133539 Nitrosococcus halophilus Nc 4 strain=Nc 4 na latest Complete Genome Major Full 2010-03-26 ASM2472v1 US DOE Joint Genome Institute GCA_000024725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/725/GCF_000024725.1_ASM2472v1/ na assembly from type material na haploid bacteria 4145260 4145260 51.500000 2 2 2 NCBI RefSeq GCF_000024725.1-RS_2026_03_30 2026-03-30 3985 3870 54 na GCF_000024765.1 PRJNA224116 SAMN02598477 na reference genome 555778 927 Halothiobacillus neapolitanus c2 strain=c2 na latest Complete Genome Major Full 2009-10-21 ASM2476v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/765/GCF_000024765.1_ASM2476v1/ na assembly from type material na haploid bacteria 2582886 2582886 54.500000 1 1 1 NCBI RefSeq GCF_000024765.1-RS_2026_03_12 2026-03-12 2415 2337 53 na GCF_000024785.1 PRJNA224116 SAMN00002600 na reference genome 526226 2054 Gordonia bronchialis DSM 43247 strain=DSM 43247 na latest Complete Genome Major Full 2009-10-27 ASM2478v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/785/GCF_000024785.1_ASM2478v1/ na assembly from type material na haploid bacteria 5290012 5290012 67.000000 2 2 2 NCBI RefSeq GCF_000024785.1-RS_2025_12_09 2025-12-09 5003 4738 58 21304674 GCF_000024805.1 PRJNA224116 SAMN00002596 na reference genome 502025 80816 Haliangium ochraceum DSM 14365 strain=DSM 14365 na latest Complete Genome Major Full 2009-10-27 ASM2480v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/805/GCF_000024805.1_ASM2480v1/ na assembly from type material na haploid bacteria 9446314 9446314 69.500000 1 1 1 NCBI RefSeq GCF_000024805.1-RS_2026_03_30 2026-03-30 6950 6785 57 21304682 GCF_000024825.1 PRJNA224116 SAMN02603570 na reference genome 150340 150340 Vibrio antiquarius strain=EX25 na latest Complete Genome Major Full 2009-11-03 ASM2482v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000024825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/825/GCF_000024825.1_ASM2482v1/ na assembly from type material na haploid bacteria 5089025 5089025 45.000000 2 2 2 NCBI RefSeq GCF_000024825.1-RS_2026_04_23 2026-04-23 4609 4430 162 na GCF_000024845.1 PRJNA224116 SAMN00002700 na reference genome 518766 29549 Rhodothermus marinus DSM 4252 strain=DSM 4252 na latest Complete Genome Major Full 2009-11-03 ASM2484v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/845/GCF_000024845.1_ASM2484v1/ na assembly from type material na haploid bacteria 3386737 3386737 64.500000 2 2 2 NCBI RefSeq GCF_000024845.1-RS_2026_04_15 2026-04-15 2986 2922 51 21304669 GCF_000024865.1 PRJNA224116 SAMN00002585 na reference genome 479432 2001 Streptosporangium roseum DSM 43021 strain=DSM 43021 na latest Complete Genome Major Full 2009-12-10 ASM2486v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/865/GCF_000024865.1_ASM2486v1/ na assembly from type material na haploid bacteria 10369518 10369518 71.000000 2 2 2 NCBI RefSeq GCF_000024865.1-RS_2026_05_01 2026-05-01 9354 9137 84 21304675 GCF_000024885.1 PRJNA224116 SAMN00002613 na reference genome 525898 65553 Sulfurospirillum deleyianum DSM 6946 strain=DSM 6946 na latest Complete Genome Major Full 2009-11-18 ASM2488v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/885/GCF_000024885.1_ASM2488v1/ na assembly from type material na haploid bacteria 2306351 2306351 39.000000 1 1 1 NCBI RefSeq GCF_000024885.1-RS_2026_04_30 2026-04-30 2346 2283 56 21304697 GCF_000024905.1 PRJNA224116 SAMN00002595 na reference genome 525903 81462 Thermanaerovibrio acidaminovorans DSM 6589 strain=DSM 6589 na latest Complete Genome Major Full 2009-11-19 ASM2490v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/905/GCF_000024905.1_ASM2490v1/ na assembly from type material na haploid bacteria 1848474 1848474 64.000000 1 1 1 NCBI RefSeq GCF_000024905.1-RS_2026_04_14 2026-04-14 1833 1767 62 21304665 GCF_000024925.1 PRJNA224116 SAMN02598426 na reference genome 446469 60920 Sanguibacter keddieii DSM 10542 strain=DSM 10542 na latest Complete Genome Major Full 2009-11-19 ASM2492v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/925/GCF_000024925.1_ASM2492v1/ na assembly from type material na haploid bacteria 4253413 4253413 72.000000 1 1 1 NCBI RefSeq GCF_000024925.1-RS_2026_05_01 2026-05-01 3787 3704 66 21304646 GCF_000024945.1 PRJNA224116 SAMN00002609 na na 479436 29466 Veillonella parvula DSM 2008 strain=DSM 2008 na latest Complete Genome Major Full 2009-11-19 ASM2494v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/945/GCF_000024945.1_ASM2494v1/ na assembly from type material na haploid bacteria 2132142 2132142 38.500000 1 1 1 NCBI RefSeq GCF_000024945.1-RS_2025_08_21 2025-08-21 1911 1838 64 21304678 GCF_000024965.1 PRJNA224116 SAMN00002456 na reference genome 446471 186189 Xylanimonas cellulosilytica DSM 15894 strain=DSM 15894 na latest Complete Genome Major Full 2009-11-20 ASM2496v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/965/GCF_000024965.1_ASM2496v1/ na assembly from type material na haploid bacteria 3831380 3831380 72.500000 2 2 2 NCBI RefSeq GCF_000024965.1-RS_2026_05_01 2026-05-01 3530 3446 63 21304672 GCF_000024985.1 PRJNA224116 SAMN02598446 na reference genome 479434 2057 Sphaerobacter thermophilus DSM 20745 strain=DSM 20745 na latest Complete Genome Major Full 2009-11-23 ASM2498v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000024985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/985/GCF_000024985.1_ASM2498v1/ na assembly from type material na haploid bacteria 3993764 3993764 68.000000 2 2 2 NCBI RefSeq GCF_000024985.1-RS_2026_05_01 2026-05-01 3548 3467 60 21304676 GCF_000025005.1 PRJNA224116 SAMN00017581 na reference genome 525904 166501 Thermobaculum terrenum ATCC BAA-798 strain=ATCC BAA-798 na latest Complete Genome Major Full 2009-11-23 ASM2500v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/005/GCF_000025005.1_ASM2500v1/ na assembly from type material na haploid bacteria 3101581 3101581 53.500000 2 2 2 NCBI RefSeq GCF_000025005.1-RS_2026_03_31 2026-03-31 2930 2848 59 21304745 GCF_000025025.1 PRJNA224116 SAMN02598415 na na 311424 61435 Dehalococcoides mccartyi VS strain=VS na latest Complete Genome Major Full 2009-12-03 ASM2502v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/025/GCF_000025025.1_ASM2502v1/ na na na haploid bacteria 1413462 1413462 47.500000 1 1 1 NCBI RefSeq GCF_000025025.1-RS_2025_05_21 2025-05-21 1509 1444 52 19893622 GCF_000025045.1 PRJNA224116 SAMN02603087 na na 684738 1358 Lactococcus lactis subsp. lactis KF147 strain=KF147 na latest Complete Genome Major Full 2009-12-18 ASM2504v1 Center for Molecular and Biomolecular Informatics, Radboud University Medical Centre Nijmegen, the Netherlands GCA_000025045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/045/GCF_000025045.1_ASM2504v1/ na na na haploid bacteria 2635654 2635654 35.000000 2 2 2 NCBI RefSeq GCF_000025045.1-RS_2026_03_27 2026-03-27 2640 2502 90 18039825;20348266 GCF_000025065.1 PRJNA224116 SAMN02598506 na reference genome 590409 2893572 Dickeya parazeae Ech586 strain=Ech586 na latest Complete Genome Major Full 2009-12-09 ASM2506v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/065/GCF_000025065.1_ASM2506v1/ na na na haploid bacteria 4818394 4818394 53.500000 1 1 1 NCBI RefSeq GCF_000025065.1-RS_2025_12_09 2025-12-09 4285 4133 104 na GCF_000025085.1 PRJNA224116 SAMN02603957 na na 698737 28035 Staphylococcus lugdunensis HKU09-01 strain=HKU09-01 na latest Complete Genome Major Full 2010-02-19 ASM2508v1 The University of Hong Kong GCA_000025085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/085/GCF_000025085.1_ASM2508v1/ na na na haploid bacteria 2658366 2658366 34.000000 1 1 1 NCBI RefSeq GCF_000025085.1-RS_2026_04_01 2026-04-01 2548 2421 83 20047907 GCF_000025105.1 PRJNA224116 SAMN02598505 na na 590168 93929 Thermotoga petrophila RKU-10 strain=RKU-10 na latest Complete Genome Major Full 2009-12-18 ASM2510v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/105/GCF_000025105.1_ASM2510v1/ na assembly from heterotypic synonym type material na haploid bacteria 1809823 1809823 46.000000 1 1 1 NCBI RefSeq GCF_000025105.1-RS_2026_02_02 2026-02-02 1882 1812 52 na GCF_000025125.1 PRJNA224116 SAMN02641594 na reference genome 1453429 713887 Candidatus Atelocyanobacterium thalassa isolate ALOHA strain=ALOHA ALOHA latest Complete Genome Major Full 2010-01-28 ASM2512v1 University of California at Santa Cruz GCA_000025125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/125/GCF_000025125.1_ASM2512v1/ na na na haploid bacteria 1443806 1443806 31.000000 1 1 1 NCBI RefSeq GCF_000025125.1-RS_2025_07_20 2025-07-20 1224 1154 47 19008448;20173737 GCF_000025145.1 PRJNA224116 SAMN02603764 na na 703339 1280 Staphylococcus aureus 04-02981 strain=04-02981 na latest Complete Genome Major Full 2010-11-05 ASM2514v1 Robert Koch Institut GCA_000025145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/145/GCF_000025145.1_ASM2514v1/ na na na haploid bacteria 2821452 2821452 33.000000 1 1 1 NCBI RefSeq GCF_000025145.1-RS_2025_05_23 2025-05-23 2812 2664 82 20386717 GCF_000025165.1 PRJNA224116 SAMN02603636 na na 701177 562 Escherichia coli O55:H7 str. CB9615 strain=CB9615 na latest Complete Genome Major Full 2010-03-08 ASM2516v1 Nankai University GCA_000025165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/165/GCF_000025165.1_ASM2516v1/ na na na haploid bacteria 5452353 5452353 50.500000 2 2 2 NCBI RefSeq GCF_000025165.1-RS_2025_03_23 2025-03-23 5414 5046 128 20090843 GCF_000025225.2 PRJNA224116 SAMN00006219 na reference genome 699246 884684 Mageeibacillus indolicus UPII9-5 strain=UPII9-5 na latest Complete Genome Major Full 2010-09-21 ASM2522v1 JCVI GCA_000025225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/225/GCF_000025225.2_ASM2522v1/ na na na haploid bacteria 1809746 1809746 44.000000 1 1 1 NCBI RefSeq GCF_000025225.2-RS_2026_03_30 2026-03-30 1543 1470 54 na GCF_000025245.2 PRJNA224116 SAMN02603131 na na 552531 28025 Bifidobacterium animalis subsp. lactis BB-12 strain=BB-12 na latest Complete Genome Major Full 2020-11-18 ASM2524v2 Chr. Hansen A/S GCA_000025245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/245/GCF_000025245.2_ASM2524v2/ na na na haploid bacteria 1944152 1944152 60.500000 1 1 1 NCBI RefSeq GCF_000025245.2-RS_2026_02_19 2026-02-19 1627 1540 67 20190051 GCF_000025265.1 PRJNA224116 SAMN00002582 na reference genome 469383 191495 Conexibacter woesei DSM 14684 strain=DSM 14684 na latest Complete Genome Major Full 2010-01-15 ASM2526v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/265/GCF_000025265.1_ASM2526v1/ na assembly from type material na haploid bacteria 6359369 6359369 72.500000 1 1 1 NCBI RefSeq GCF_000025265.1-RS_2025_12_09 2025-12-09 6019 5940 52 21304704 GCF_000025285.1 PRJNA224116 SAMN00017459 na reference genome 572546 84156 Archaeoglobus profundus DSM 5631 strain=DSM 5631 na latest Complete Genome Major Full 2010-01-19 ASM2528v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/285/GCF_000025285.1_ASM2528v1/ na assembly from type material na haploid archaea 1563423 1563423 42.000000 2 2 2 NCBI RefSeq GCF_000025285.1-RS_2025_11_21 2025-11-21 1899 1828 52 21304717 GCF_000025305.1 PRJNA224116 SAMN02598507 na reference genome 591001 905 Acidaminococcus fermentans DSM 20731 strain=DSM 20731 na latest Complete Genome Major Full 2010-01-15 ASM2530v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/305/GCF_000025305.1_ASM2530v1/ na assembly from type material na haploid bacteria 2329769 2329769 56.000000 1 1 1 NCBI RefSeq GCF_000025305.1-RS_2026_03_12 2026-03-12 2192 2086 82 21304687 GCF_000025325.1 PRJNA224116 SAMN02598471 na reference genome 543526 62320 Haloterrigena turkmenica DSM 5511 strain=DSM 5511 na latest Complete Genome Major Full 2010-01-19 ASM2532v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/325/GCF_000025325.1_ASM2532v1/ na assembly from type material na haploid archaea 5440782 5440782 64.500000 7 7 7 NCBI RefSeq GCF_000025325.1-RS_2025_11_20 2025-11-20 5306 5079 62 21304683 GCF_000025345.1 PRJNA224116 SAMN00002612 na reference genome 526225 1861 Geodermatophilus obscurus DSM 43160 strain=DSM 43160 na latest Complete Genome Major Full 2010-01-20 ASM2534v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/345/GCF_000025345.1_ASM2534v1/ na assembly from type material na haploid bacteria 5322497 5322497 74.000000 1 1 1 NCBI RefSeq GCF_000025345.1-RS_2026_04_19 2026-04-19 5170 4986 63 21304698 GCF_000025365.1 PRJNA224116 SAMN02604154 na na 710128 2096 Mycoplasmoides gallisepticum str. R(high) strain=R(high) na latest Complete Genome Major Full 2010-01-29 ASM2536v1 University of Connecticut GCA_000025365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/365/GCF_000025365.1_ASM2536v1/ na na na haploid bacteria 1012027 1012027 31.500000 1 1 1 NCBI RefSeq GCF_000025365.1-RS_2026_02_26 2026-02-26 809 729 41 20123709 GCF_000025385.1 PRJNA224116 SAMN02604155 na na 708616 2096 Mycoplasmoides gallisepticum str. F strain=F na latest Complete Genome Major Full 2010-01-29 ASM2538v1 University of Connecticut GCA_000025385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/385/GCF_000025385.1_ASM2538v1/ na na na haploid bacteria 977612 977612 31.500000 1 1 1 NCBI RefSeq GCF_000025385.1-RS_2026_02_26 2026-02-26 802 734 41 20123709 GCF_000025405.2 PRJNA224116 SAMN02603236 na na 706191 553 Pantoea ananatis LMG 20103 strain=LMG 20103 na latest Complete Genome Major Full 2011-03-24 ASM2540v1 Forestry and Agricultural Biotechnology Institute GCA_000025405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/405/GCF_000025405.2_ASM2540v1/ na na na haploid bacteria 4703373 4703373 53.500000 1 1 1 NCBI RefSeq GCF_000025405.2-RS_2026_03_27 2026-03-27 4359 4135 109 20348253 GCF_000025425.1 PRJNA224116 SAMN02603425 na na 567106 197 Campylobacter jejuni subsp. jejuni IA3902 na IA3902 latest Complete Genome Major Full 2010-01-29 ASM2542v1 Iowa State University GCA_000025425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/425/GCF_000025425.1_ASM2542v1/ na na na haploid bacteria 1672219 1672219 30.500000 2 2 2 NCBI RefSeq GCF_000025425.1-RS_2025_06_04 2025-06-04 1744 1648 56 22188995 GCF_000025465.1 PRJNA224116 SAMN02598515 na na 640131 244366 Klebsiella variicola At-22 strain=At-22 na latest Complete Genome Major Full 2010-02-16 ASM2546v1 US DOE Joint Genome Institute GCA_000025465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/465/GCF_000025465.1_ASM2546v1/ na na na haploid bacteria 5458505 5458505 57.500000 1 1 1 NCBI RefSeq GCF_000025465.1-RS_2025_12_05 2025-12-05 5296 5097 118 19965433 GCF_000025485.1 PRJNA224116 SAMN02598487 na reference genome 572477 1049 Allochromatium vinosum DSM 180 strain=DSM 180 na latest Complete Genome Major Full 2010-02-16 ASM2548v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/485/GCF_000025485.1_ASM2548v1/ na assembly from type material na haploid bacteria 3669074 3669074 64.000000 3 3 3 NCBI RefSeq GCF_000025485.1-RS_2025_12_09 2025-12-09 3354 3258 64 22675582 GCF_000025505.1 PRJNA224116 SAMN02598503 na reference genome 589924 54261 Ferroglobus placidus DSM 10642 strain=DSM 10642 na latest Complete Genome Major Full 2010-02-16 ASM2550v1 US DOE Joint Genome Institute GCA_000025505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/505/GCF_000025505.1_ASM2550v1/ na assembly from type material na haploid archaea 2196266 2196266 44.000000 1 1 1 NCBI RefSeq GCF_000025505.1-RS_2025_11_21 2025-11-21 2622 2550 54 22180810 GCF_000025525.1 PRJNA224116 SAMN02598520 na na 644281 644281 Methanocaldococcus sp. FS406-22 strain=FS406-22 na latest Complete Genome Major Full 2010-02-17 ASM2552v1 US DOE Joint Genome Institute GCA_000025525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/525/GCF_000025525.1_ASM2552v1/ na na na haploid archaea 1773136 1773136 32.000000 2 2 2 NCBI RefSeq GCF_000025525.1-RS_2024_10_21 2024-10-21 1895 1834 45 na GCF_000025545.1 PRJNA224116 SAMN02598475 na na 396595 396595 Thioalkalivibrio sp. K90mix strain=K90mix na latest Complete Genome Major Full 2010-02-17 ASM2554v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/545/GCF_000025545.1_ASM2554v1/ na na na haploid bacteria 2985056 2985056 65.500000 2 2 2 NCBI RefSeq GCF_000025545.1-RS_2024_08_22 2024-08-22 2921 2818 57 22675584 GCF_000025565.1 PRJNA224116 SAMN02603901 na na 716541 550 Enterobacter cloacae subsp. cloacae ATCC 13047 strain=ATCC 13047 na latest Complete Genome Major Full 2010-04-23 ASM2556v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000025565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/565/GCF_000025565.1_ASM2556v1/ na assembly from type material na haploid bacteria 5598796 5598796 54.500000 3 3 3 NCBI RefSeq GCF_000025565.1-RS_2026_03_20 2026-03-20 5533 5245 117 20207761 GCF_000025605.1 PRJNA224116 SAMN02598512 na reference genome 638303 136094 Thermocrinis albus DSM 14484 strain=DSM 14484 na latest Complete Genome Major Full 2010-02-19 ASM2560v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/605/GCF_000025605.1_ASM2560v1/ na assembly from type material na haploid bacteria 1500577 1500577 47.000000 1 1 1 NCBI RefSeq GCF_000025605.1-RS_2026_05_13 2026-05-13 1650 1596 49 21304702 GCF_000025625.1 PRJNA224116 SAMN02598473 na reference genome 547559 13769 Natrialba magadii ATCC 43099 strain=ATCC 43099 na latest Complete Genome Major Full 2010-02-24 ASM2562v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/625/GCF_000025625.1_ASM2562v1/ na assembly from type material na haploid archaea 4443643 4443643 61.000000 4 4 4 NCBI RefSeq GCF_000025625.1-RS_2025_12_01 2025-12-01 4264 4128 63 22559199 GCF_000025645.1 PRJNA224116 SAMN02598495 na reference genome 580331 108150 Thermoanaerobacter italicus Ab9 strain=Ab9 na latest Complete Genome Major Full 2010-02-24 ASM2564v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/645/GCF_000025645.1_ASM2564v1/ na assembly from type material na haploid bacteria 2451061 2451061 34.000000 1 1 1 NCBI RefSeq GCF_000025645.1-RS_2026_05_01 2026-05-01 2463 2316 71 na GCF_000025665.1 PRJNA224116 SAMN02598523 na na 439481 379547 Aciduliprofundum boonei T469 strain=T469 na latest Complete Genome Major Full 2010-02-24 ASM2566v1 US DOE Joint Genome Institute GCA_000025665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/665/GCF_000025665.1_ASM2566v1/ na na na haploid archaea 1486778 1486778 39.000000 1 1 1 NCBI RefSeq GCF_000025665.1-RS_2024_10_21 2024-10-21 1601 1544 51 na GCF_000025685.1 PRJNA224116 SAMN02604027 na reference genome 309800 2246 Haloferax volcanii DS2 strain=DS2 na latest Complete Genome Major Full 2010-03-23 ASM2568v1 TIGR GCA_000025685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/685/GCF_000025685.1_ASM2568v1/ na assembly from type material na haploid archaea 4012900 4012900 65.500000 5 5 5 NCBI RefSeq GCF_000025685.1-RS_2025_12_05 2025-12-05 4078 3897 61 20333302 GCF_000025705.1 PRJNA224116 SAMN02598496 na reference genome 580332 63745 Sideroxydans lithotrophicus ES-1 strain=ES-1 na latest Complete Genome Major Full 2010-03-26 ASM2570v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/705/GCF_000025705.1_ASM2570v1/ na assembly from type material na haploid bacteria 3003656 3003656 57.500000 1 1 1 NCBI RefSeq GCF_000025705.1-RS_2025_08_18 2025-08-18 3030 2961 55 na GCF_000025725.1 PRJNA224116 SAMN02598464 na reference genome 522772 118000 Denitrovibrio acetiphilus DSM 12809 strain=DSM 12809 na latest Complete Genome Major Full 2010-03-11 ASM2572v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/725/GCF_000025725.1_ASM2572v1/ na assembly from type material na haploid bacteria 3222077 3222077 42.500000 1 1 1 NCBI RefSeq GCF_000025725.1-RS_2026_05_26 2026-05-26 3086 3006 52 21304711 GCF_000025745.1 PRJNA224116 SAMN02603334 na na 714962 562 Escherichia coli IHE3034 strain=IHE3034 na latest Complete Genome Major Full 2010-04-12 ASM2574v1 IGS GCA_000025745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/745/GCF_000025745.1_ASM2574v1/ na na na haploid bacteria 5108383 5108383 50.500000 1 1 1 NCBI RefSeq GCF_000025745.1-RS_2025_06_09 2025-06-09 5041 4732 125 20439758 GCF_000025765.1 PRJNA224116 SAMN00000718 na na 553199 1747 Cutibacterium acnes SK137 strain=SK137 na latest Complete Genome Major Full 2010-03-23 ASM2576v1 J. Craig Venter Institute GCA_000025765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/765/GCF_000025765.1_ASM2576v1/ na na na haploid bacteria 2495334 2495334 60.000000 1 1 1 NCBI RefSeq GCF_000025765.1-RS_2026_04_01 2026-04-01 2449 2329 58 na GCF_000025805.1 PRJNA224116 SAMN02603894 na na 592022 1404 Priestia megaterium DSM 319 strain=DSM 319 na latest Complete Genome Major Full 2010-04-16 ASM2580v1 Technical University Braunschweig GCA_000025805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/805/GCF_000025805.1_ASM2580v1/ na na na haploid bacteria 5097447 5097447 38.000000 1 1 1 NCBI RefSeq GCF_000025805.1-RS_2025_09_10 2025-09-10 5314 5058 153 21705586 GCF_000025825.1 PRJNA224116 SAMN02603354 na na 545693 1404 Priestia megaterium QM B1551 strain=QM B1551 na latest Complete Genome Major Full 2010-04-08 ASM2582v1 Institute for Genome Sciences, University of Maryland School of Medicine GCA_000025825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/825/GCF_000025825.1_ASM2582v1/ na na na haploid bacteria 5523192 5523192 38.000000 8 8 8 NCBI RefSeq GCF_000025825.1-RS_2026_04_02 2026-04-02 5759 5500 182 11251820;14602653;15933003;21705586 GCF_000025845.1 PRJNA224116 SAMN02603450 na reference genome 512564 50052 Mycoplasma crocodyli MP145 strain=MP145 na latest Complete Genome Major Full 2010-03-26 ASM2584v1 J. Craig Venter Institute GCA_000025845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/845/GCF_000025845.1_ASM2584v1/ na assembly from type material na haploid bacteria 934379 934379 27.000000 1 1 1 NCBI RefSeq GCF_000025845.1-RS_2025_08_06 2025-08-06 803 760 43 21460083 GCF_000025865.1 PRJNA224116 SAMN02598474 na reference genome 547558 2176 Methanohalophilus mahii DSM 5219 strain=DSM 5219 na latest Complete Genome Major Full 2010-03-31 ASM2586v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/865/GCF_000025865.1_ASM2586v1/ na assembly from type material na haploid archaea 2012424 2012424 42.500000 1 1 1 NCBI RefSeq GCF_000025865.1-RS_2025_11_21 2025-11-21 2087 2001 64 na GCF_000025885.1 PRJNA224116 SAMN02598488 na reference genome 572547 81468 Aminobacterium colombiense DSM 12261 strain=DSM 12261 na latest Complete Genome Major Full 2010-04-05 ASM2588v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/885/GCF_000025885.1_ASM2588v1/ na assembly from type material na haploid bacteria 1980592 1980592 45.500000 1 1 1 NCBI RefSeq GCF_000025885.1-RS_2026_03_27 2026-03-27 1961 1894 59 21304712 GCF_000025905.1 PRJNA224116 SAMN02598501 na reference genome 583355 395922 Coraliomargarita akajimensis DSM 45221 strain=DSM 45221 na latest Complete Genome Major Full 2010-04-05 ASM2590v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000025905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/905/GCF_000025905.1_ASM2590v1/ na assembly from type material na haploid bacteria 3750771 3750771 53.500000 1 1 1 NCBI RefSeq GCF_000025905.1-RS_2026_05_05 2026-05-05 3086 3022 56 21304713 GCF_000025925.1 PRJNA224116 SAMN02604020 na reference genome 264731 839 Xylanibacter ruminicola 23 strain=Bryant 23 na latest Complete Genome Major Full 2010-04-09 ASM2592v1 TIGR GCA_000025925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/925/GCF_000025925.1_ASM2592v1/ na assembly from type material na haploid bacteria 3619559 3619559 47.500000 1 1 1 NCBI RefSeq GCF_000025925.1-RS_2026_01_08 2026-01-08 3063 2966 68 20585943 GCF_000025945.1 PRJNA224116 SAMEA3138217 na reference genome 177439 84980 Desulfotalea psychrophila LSv54 strain=LSv54 na latest Complete Genome Major Full 2004-07-31 ASM2594v1 e.gene Biotechnologie GmbH GCA_000025945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/945/GCF_000025945.1_ASM2594v1/ na assembly from type material na haploid bacteria 3659634 3659634 46.500000 3 3 3 NCBI RefSeq GCF_000025945.1-RS_2025_12_10 2025-12-10 3262 3091 91 15305914 GCF_000025965.1 PRJNA224116 SAMEA3138218 na reference genome 76114 551760 Aromatoleum aromaticum EbN1 strain=EbN1 na latest Complete Genome Major Full 2004-12-03 ASM2596v1 Max Planck Institute GCA_000025965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/965/GCF_000025965.1_ASM2596v1/ na assembly from type material na haploid bacteria 4727255 4727255 64.500000 3 3 3 NCBI RefSeq GCF_000025965.1-RS_2026_04_04 2026-04-04 4590 4408 71 15551059;15687214 GCF_000025985.1 PRJNA224116 SAMEA1705957 na reference genome 272559 817 Bacteroides fragilis NCTC 9343 strain=NCTC 9343 na latest Complete Genome Major Full 2005-03-03 ASM2598v1 Sanger Institute GCA_000025985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/025/985/GCF_000025985.1_ASM2598v1/ na assembly from type material na haploid bacteria 5241700 5241700 43.000000 2 2 2 NCBI RefSeq GCF_000025985.1-RS_2025_12_09 2025-12-09 4324 4160 94 15746427 GCF_000026005.1 PRJNA224116 SAMEA1705918 na reference genome 254945 779 Ehrlichia ruminantium str. Welgevonden strain=Welgevonden na latest Complete Genome Major Full 2005-01-05 ASM2600v1 University of Pretoria, South Africa GCA_000026005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/005/GCF_000026005.1_ASM2600v1/ na assembly from type material na haploid bacteria 1516355 1516355 27.500000 1 1 1 NCBI RefSeq GCF_000026005.1-RS_2026_01_08 2026-01-08 998 931 43 15637156 GCF_000026025.1 PRJNA224116 SAMEA1705924 na na 218497 83555 Chlamydia abortus S26/3 strain=S26/3 na latest Complete Genome Major Full 2005-04-01 ASM2602v1 Sanger Institute GCA_000026025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/025/GCF_000026025.1_ASM2602v1/ na na na haploid bacteria 1144377 1144377 40.000000 1 1 1 NCBI RefSeq GCF_000026025.1-RS_2026_02_16 2026-02-16 1025 951 44 15837807 GCF_000026045.1 PRJNA224116 SAMEA3138222 na reference genome 348780 2257 Natronomonas pharaonis DSM 2160 strain=Gabara na latest Complete Genome Major Full 2005-09-28 ASM2604v1 Max Planck Institute GCA_000026045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/045/GCF_000026045.1_ASM2604v1/ na assembly from type material na haploid archaea 2749696 2749696 63.000000 3 3 3 NCBI RefSeq GCF_000026045.1-RS_2025_12_02 2025-12-02 2895 2808 51 16169924 GCF_000026065.1 PRJNA224116 SAMEA3138223 na na 314315 1599 Latilactobacillus sakei subsp. sakei 23K strain=23K na latest Complete Genome Major Full 2005-11-02 ASM2606v1 Institut National de la Recherche Agronomique (INRA) GCA_000026065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/065/GCF_000026065.1_ASM2606v1/ na na na haploid bacteria 1884661 1884661 41.500000 1 1 1 NCBI RefSeq GCF_000026065.1-RS_2025_09_10 2025-09-10 1920 1803 88 na GCF_000026085.1 PRJNA224116 SAMEA3138224 na reference genome 166935 166935 Pseudoalteromonas translucida strain=TAC125 na latest Complete Genome Major Full 2005-10-03 ASM2608v1 CNRS GCA_000026085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/085/GCF_000026085.1_ASM2608v1/ na na na haploid bacteria 3850272 3850272 40.000000 2 2 2 NCBI RefSeq GCF_000026085.1-RS_2025_12_13 2025-12-13 3525 3361 138 16169927 GCF_000026105.1 PRJNA224116 SAMEA3138225 na reference genome 384676 312306 Pseudomonas entomophila L48 strain=L48 na latest Complete Genome Major Full 2006-05-10 ASM2610v1 Genoscope GCA_000026105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/105/GCF_000026105.1_ASM2610v1/ na assembly from type material na haploid bacteria 5888780 5888780 64.000000 1 1 1 NCBI RefSeq GCF_000026105.1-RS_2026_03_30 2026-03-30 5246 5083 105 16699499 GCF_000026145.1 PRJNA224116 SAMEA3138227 na na 114615 114615 Bradyrhizobium sp. ORS 278 strain=ORS278 na latest Complete Genome Major Full 2007-05-01 ASM2614v1 Genoscope GCA_000026145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/145/GCF_000026145.1_ASM2614v1/ na na na haploid bacteria 7456587 7456587 65.500000 1 1 1 NCBI RefSeq GCF_000026145.1-RS_2024_08_22 2024-08-22 6744 6639 62 17540897 GCF_000026185.1 PRJNA224116 SAMEA2272215 na reference genome 465817 338565 Erwinia tasmaniensis Et1/99 strain=Et1/99 na latest Complete Genome Major Full 2008-05-13 ASM2618v1 Max Planck Institute for Molecular Genetics (MPIMG) GCA_000026185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/185/GCF_000026185.1_ASM2618v1/ na assembly from type material na haploid bacteria 4067864 4067864 53.500000 6 6 6 NCBI RefSeq GCF_000026185.1-RS_2025_12_11 2025-12-11 3790 3595 117 18462403 GCF_000026205.1 PRJNA224116 SAMEA2272373 na reference genome 37692 37692 Candidatus Phytoplasma mali strain=AT na latest Complete Genome Major Full 2008-07-04 ASM2620v1 Federal Biological Research Center for Agriculture and Forestry GCA_000026205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/205/GCF_000026205.1_ASM2620v1/ na na na haploid bacteria 601943 601943 21.500000 1 1 1 NCBI RefSeq GCF_000026205.1-RS_2026_03_31 2026-03-31 543 502 39 18582369 GCF_000026225.1 PRJNA224116 SAMEA3138228 na na 585054 564 Escherichia fergusonii ATCC 35469 strain=ATCC 35469T na latest Complete Genome Major Full 2008-12-18 ASM2622v1 Genoscope GCA_000026225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/225/GCF_000026225.1_ASM2622v1/ na assembly from type material na haploid bacteria 4643861 4643861 50.000000 2 2 2 NCBI RefSeq GCF_000026225.1-RS_2026_02_10 2026-02-10 4477 4280 115 na GCF_000026245.1 PRJNA224116 SAMEA3138229 na na 585055 562 Escherichia coli 55989 strain=55989 na latest Complete Genome Major Full 2008-12-18 ASM2624v1 Institut Pasteur and Genoscope GCA_000026245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/245/GCF_000026245.1_ASM2624v1/ na na na haploid bacteria 5154862 5154862 50.500000 1 1 1 NCBI RefSeq GCF_000026245.1-RS_2025_06_09 2025-06-09 5066 4705 125 na GCF_000026265.1 PRJNA224116 SAMEA3138230 na na 585034 562 Escherichia coli IAI1 strain=IAI1 na latest Complete Genome Major Full 2008-12-18 ASM2626v1 Genoscope GCA_000026265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/265/GCF_000026265.1_ASM2626v1/ na na na haploid bacteria 4700560 4700560 51.000000 1 1 1 NCBI RefSeq GCF_000026265.1-RS_2025_06_09 2025-06-09 4528 4292 116 na GCF_000026285.1 PRJNA224116 SAMEA3138231 na na 585035 562 Escherichia coli S88 strain=S88 na latest Complete Genome Major Full 2008-12-18 ASM2628v2 Genoscope GCA_000026285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/285/GCF_000026285.1_ASM2628v2/ na na na haploid bacteria 5166121 5166121 50.500000 2 2 2 NCBI RefSeq GCF_000026285.1-RS_2025_06_19 2025-06-19 5128 4775 119 19307211 GCF_000026305.1 PRJNA224116 SAMEA3138232 na na 585397 562 Escherichia coli ED1a strain=ED1a na latest Chromosome Major Full 2008-12-18 ASM2630v1 Genoscope GCA_000026305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/305/GCF_000026305.1_ASM2630v1/ na na na haploid bacteria 5209548 5209448 50.500000 1 1 2 NCBI RefSeq GCF_000026305.1-RS_2025_06_08 2025-06-08 5224 4813 117 na GCF_000026325.1 PRJNA224116 SAMEA3138233 na na 585056 562 Escherichia coli UMN026 strain=UMN026 na latest Chromosome Major Full 2008-12-18 ASM2632v2 Genoscope GCA_000026325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/325/GCF_000026325.1_ASM2632v2/ na na na haploid bacteria 5358200 5358147 50.500000 3 3 4 NCBI RefSeq GCF_000026325.1-RS_2025_07_22 2025-07-22 5255 4962 118 na GCF_000026345.1 PRJNA224116 SAMEA3138234 na na 585057 562 Escherichia coli IAI39 strain=IAI39 na latest Complete Genome Major Full 2008-12-18 ASM2634v1 Genoscope GCA_000026345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/345/GCF_000026345.1_ASM2634v1/ na na na haploid bacteria 5132068 5132068 50.500000 1 1 1 NCBI RefSeq GCF_000026345.1-RS_2025_06_09 2025-06-09 5015 4616 115 na GCF_000026365.1 PRJNA39573 SAMEA3138235 na reference genome 4956 4956 Zygosaccharomyces rouxii strain=CBS 732 na latest Chromosome Major Full 2009-06-05 ASM2636v1 Genolevures Consortium GCA_000026365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/365/GCF_000026365.1_ASM2636v1/ na assembly from type material na haploid fungi 9764635 9763366 39.000000 7 7 9 Genolevures Consortium Annotation submitted by Genolevures Consortium 2025-07-15 5323 4991 332 19525356 GCF_000026405.1 PRJNA224116 SAMN02603482 na na 349519 33964 Leuconostoc citreum KM20 strain=KM20 na latest Complete Genome Major Full 2008-03-12 ASM2640v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000026405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/405/GCF_000026405.1_ASM2640v1/ na na na haploid bacteria 1896614 1896614 39.000000 5 5 5 NCBI RefSeq GCF_000026405.1-RS_2026_04_15 2026-04-15 1931 1812 84 18281406 GCF_000026445.2 PRJNA224116 SAMN02603618 na na 459424 261524 Mycobacterium liflandii 128FXT strain=128FXT na latest Complete Genome Major Full 2013-01-16 ASM2644v2 Monash University GCA_000026445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/445/GCF_000026445.2_ASM2644v2/ na na na haploid bacteria 6399543 6399543 65.500000 2 2 2 NCBI RefSeq GCF_000026445.2-RS_2025_01_24 2025-01-24 5605 4846 54 18840298;23204453 GCF_000026505.1 PRJNA224116 SAMEA2272375 na na 568703 47715 Lacticaseibacillus rhamnosus GG strain=GG (ATCC 53103) na latest Complete Genome Major Full 2009-09-02 ASM2650v1 Institute of Biotechnology, University of Helsinki, Finland GCA_000026505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/505/GCF_000026505.1_ASM2650v1/ na na na haploid bacteria 3010111 3010111 46.500000 1 1 1 NCBI RefSeq GCF_000026505.1-RS_2025_09_10 2025-09-10 2831 2700 75 19805152 GCF_000026525.1 PRJNA224116 SAMEA2272728 na na 568704 47715 Lacticaseibacillus rhamnosus Lc 705 strain=Lc 705 na latest Complete Genome Major Full 2009-09-02 ASM2652v1 Institute of Biotechnology, University of Helsinki, Finland GCA_000026525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/525/GCF_000026525.1_ASM2652v1/ na na na haploid bacteria 3033106 3033106 46.500000 2 2 2 NCBI RefSeq GCF_000026525.1-RS_2025_09_10 2025-09-10 2833 2640 79 19805152 GCF_000026545.1 PRJNA224116 SAMEA1705959 na na 574521 562 Escherichia coli O127:H6 str. E2348/69 strain=E2348/69 na latest Complete Genome Major Full 2008-11-26 ASM2654v1 Sanger Institute GCA_000026545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/545/GCF_000026545.1_ASM2654v1/ na na na haploid bacteria 5069678 5069678 50.500000 3 3 3 NCBI RefSeq GCF_000026545.1-RS_2025_06_09 2025-06-09 5124 4715 118 18952797 GCF_000026565.1 PRJNA224116 SAMEA1705953 na na 554290 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 strain=AKU_12601 na latest Complete Genome Major Full 2008-08-19 ASM2656v1 Wellcome Trust Sanger Institute GCA_000026565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/565/GCF_000026565.1_ASM2656v1/ na na na haploid bacteria 4581797 4581797 52.000000 1 1 1 NCBI RefSeq GCF_000026565.1-RS_2025_03_16 2025-03-16 4491 4121 115 19159446 GCF_000026585.1 PRJNA224116 SAMEA2272426 na na 553482 1336 Streptococcus equi subsp. equi 4047 strain=4047 na latest Complete Genome Major Full 2009-03-26 ASM2658v1 The Wellcome Trust Sanger Institute GCA_000026585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/585/GCF_000026585.1_ASM2658v1/ na na na haploid bacteria 2253793 2253793 41.500000 1 1 1 NCBI RefSeq GCF_000026585.1-RS_2026_04_27 2026-04-27 2194 1992 88 19325880 GCF_000026645.1 PRJNA224116 SAMEA1705916 na na 557722 287 Pseudomonas aeruginosa LESB58 strain=LESB58 na latest Complete Genome Major Full 2008-12-24 ASM2664v1 Wellcome Trust Sanger Institute GCA_000026645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/645/GCF_000026645.1_ASM2664v1/ na na na haploid bacteria 6601757 6601757 66.500000 1 1 1 NCBI RefSeq GCF_000026645.1-RS_2025_08_25 2025-08-25 6195 6059 84 19047519 GCF_000026665.1 PRJNA224116 SAMEA1705947 na na 561276 1313 Streptococcus pneumoniae ATCC 700669 strain=ATCC 700669 na latest Complete Genome Major Full 2009-01-13 ASM2666v1 Wellcome Trust Sanger Institute GCA_000026665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/665/GCF_000026665.1_ASM2666v1/ na na na haploid bacteria 2221315 2221315 39.500000 1 1 1 NCBI RefSeq GCF_000026665.1-RS_2026_02_10 2026-02-10 2271 2031 73 19114491 GCF_000026705.1 PRJNA224116 SAMEA2272134 na na 568819 1639 Listeria monocytogenes serotype 4b str. CLIP 80459 strain=Clip80459 na latest Complete Genome Major Full 2009-03-30 ASM2670v1 Institut Pasteur - Unite de Biologie des Bacteries Intracellulaires GCA_000026705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/705/GCF_000026705.1_ASM2670v1/ na na na haploid bacteria 2912690 2912690 38.000000 1 1 1 NCBI RefSeq GCF_000026705.1-RS_2025_03_15 2025-03-15 2890 2780 89 na GCF_000026725.1 PRJNA224116 SAMEA2272312 na na 568813 1307 Streptococcus suis SC84 strain=SC84 na latest Complete Genome Major Full 2009-07-07 ASM2672v1 Sanger Institute GCA_000026725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/725/GCF_000026725.1_ASM2672v1/ na na na haploid bacteria 2095898 2095898 41.000000 1 1 1 NCBI RefSeq GCF_000026725.1-RS_2026_04_01 2026-04-01 2045 1920 72 19603075 GCF_000026745.1 PRJNA224116 SAMEA2272697 na reference genome 568814 1307 Streptococcus suis BM407 strain=BM407 na latest Complete Genome Major Full 2009-07-07 ASM2674v1 The Wellcome Trust Sanger Institute GCA_000026745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/745/GCF_000026745.1_ASM2674v1/ na na na haploid bacteria 2170808 2170808 41.000000 2 2 2 NCBI RefSeq GCF_000026745.1-RS_2026_03_30 2026-03-30 2133 1987 72 19603075 GCF_000026765.1 PRJNA224116 SAMEA2272202 na reference genome 45361 45361 Mesomycoplasma conjunctivae strain=HRC/581T (NCTC10147) na latest Chromosome Major Full 2009-06-16 ASM2676v1 Swiss Institute of Bioinformatics GCA_000026765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/765/GCF_000026765.1_ASM2676v1/ na assembly from type material na haploid bacteria 846214 844775 28.500000 1 1 2 NCBI RefSeq GCF_000026765.1-RS_2025_12_13 2025-12-13 703 665 34 na GCF_000026905.1 PRJNA224116 SAMEA2272143 na na 672161 813 Chlamydia trachomatis B/TZ1A828/OT strain=B/TZ1A828/OT na latest Complete Genome Major Full 2009-05-11 ASM2690v1 Wellcome Trust Sanger Institute GCA_000026905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/905/GCF_000026905.1_ASM2690v1/ na na na haploid bacteria 1044282 1044282 41.500000 1 1 1 NCBI RefSeq GCF_000026905.1-RS_2025_03_15 2025-03-15 948 884 46 19460133 GCF_000026925.1 PRJNA224116 SAMEA2272641 na na 580049 813 Chlamydia trachomatis B/Jali20/OT strain=Jali20 na latest Complete Genome Major Full 2009-05-11 ASM2692v1 Wellcome Trust Sanger Institute GCA_000026925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/925/GCF_000026925.1_ASM2692v1/ na na na haploid bacteria 1044352 1044352 41.500000 1 1 1 NCBI RefSeq GCF_000026925.1-RS_2025_03_15 2025-03-15 952 885 46 19460133 GCF_000026945.1 PRJNA38659 SAMEA2272258 na reference genome 573826 42374 Candida dubliniensis CD36 strain=CD36 na latest Complete Genome Major Full 2009-02-16 ASM2694v1 Wellcome Trust Sanger Institute GCA_000026945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/945/GCF_000026945.1_ASM2694v1/ na assembly from type material na haploid fungi 14618422 14618422 33.000000 8 8 8 Wellcome Trust Sanger Institute GCF_000026945.1-RS_2026_03 2026-03-04 6093 5859 112 19745113 GCF_000026965.1 PRJNA224116 SAMEA2272745 na na 604162 487 Neisseria meningitidis 8013 strain=8013 na latest Complete Genome Major Full 2009-10-15 ASM2696v1 INSERM GCA_000026965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/965/GCF_000026965.1_ASM2696v1/ na na na haploid bacteria 2277550 2277550 51.500000 1 1 1 NCBI RefSeq GCF_000026965.1-RS_2026_02_10 2026-02-10 2280 2014 75 19818133 GCF_000026985.1 PRJNA224116 SAMEA2272353 na na 644651 79967 Erwinia pyrifoliae DSM 12163 strain=DSM 12163 na latest Chromosome Major Full 2010-01-07 ASM2698v1 Agroscope Changins-Waedenswil ACW GCA_000026985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/026/985/GCF_000026985.1_ASM2698v1/ na assembly from type material na haploid bacteria 4072827 4072775 53.500000 5 5 7 NCBI RefSeq GCF_000026985.1-RS_2026_02_10 2026-02-10 3791 3503 110 20047678 GCF_000027005.1 PRJNA39439 SAMEA2272385 na reference genome 644223 460519 Komagataella phaffii GS115 strain=GS115 na latest Chromosome Major Full 2009-05-25 ASM2700v1 Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium GCA_000027005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/005/GCF_000027005.1_ASM2700v1/ na na na haploid fungi 9216378 9215851 41.000000 4 4 15 Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium Annotation submitted by Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium 2023-02-17 5040 5040 0 19465926 GCF_000027025.1 PRJNA224116 SAMEA2272777 na na 568708 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 strain=D23580 na latest Complete Genome Major Full 2009-10-10 ASM2702v1 Wellcome Trust Sanger Institute GCA_000027025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/025/GCF_000027025.1_ASM2702v1/ na na na haploid bacteria 4879400 4879400 52.000000 1 1 1 NCBI RefSeq GCF_000027025.1-RS_2025_08_25 2025-08-25 4776 4528 125 19901036;23023330 GCF_000027045.1 PRJNA224116 SAMEA2272282 na na 663951 1280 Staphylococcus aureus subsp. aureus TW20 strain=TW20 na latest Complete Genome Major Full 2009-11-25 ASM2704v1 The Wellcome Trust Sanger Institute GCA_000027045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/045/GCF_000027045.1_ASM2704v1/ na na na haploid bacteria 3075806 3075806 33.000000 3 3 3 NCBI RefSeq GCF_000027045.1-RS_2026_03_09 2026-03-09 3116 2931 80 19948800 GCF_000027085.1 PRJNA224116 SAMEA2272524 na na 637910 67825 Citrobacter rodentium ICC168 strain=ICC168 na latest Complete Genome Major Full 2010-01-04 ASM2708v1 Wellcome Trust Sanger Institute GCA_000027085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/085/GCF_000027085.1_ASM2708v1/ na na na haploid bacteria 5444283 5444283 54.500000 4 4 4 NCBI RefSeq GCF_000027085.1-RS_2026_02_06 2026-02-06 5227 4850 114 19897651 GCF_000027105.1 PRJNA224116 SAMEA3138243 na na 645463 1496 Clostridioides difficile R20291 strain=R20291 na latest Chromosome Major Full 2009-10-01 ASM2710v1 Wellcome Trust Sanger Institute GCA_000027105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/105/GCF_000027105.1_ASM2710v1/ na na na haploid bacteria 4191339 4191139 29.000000 1 1 3 NCBI RefSeq GCF_000027105.1-RS_2026_02_28 2026-02-28 3828 3678 97 19781061;20368420 GCF_000027125.1 PRJNA224116 SAMEA2272277 na na 216592 562 Escherichia coli 042 strain=042 na latest Complete Genome Major Full 2010-01-28 ASM2712v1 Wellcome Trust Sanger Institute GCA_000027125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/125/GCF_000027125.1_ASM2712v1/ na na na haploid bacteria 5355323 5355323 50.500000 2 2 2 NCBI RefSeq GCF_000027125.1-RS_2025_05_18 2025-05-18 5292 4932 126 20098708 GCF_000027145.1 PRJNA224116 SAMEA2272547 na reference genome 683837 1640 Listeria seeligeri serovar 1/2b str. SLCC3954 strain=SLCC3954 na latest Complete Genome Major Full 2010-02-18 ASM2714v1 PathoGenoMik GCA_000027145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/145/GCF_000027145.1_ASM2714v1/ na assembly from type material na haploid bacteria 2797636 2797636 37.500000 1 1 1 NCBI RefSeq GCF_000027145.1-RS_2025_12_12 2025-12-12 2790 2666 89 20061480 GCF_000027165.1 PRJNA224116 SAMEA3138244 na na 365659 28037 Streptococcus mitis B6 strain=B6 na latest Complete Genome Major Full 2010-02-16 ASM2716v1 Department of Microbiology, University of Kaiserslautern GCA_000027165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/165/GCF_000027165.1_ASM2716v1/ na na na haploid bacteria 2146611 2146611 40.000000 1 1 1 NCBI RefSeq GCF_000027165.1-RS_2025_03_16 2025-03-16 2133 1981 76 20195536 GCF_000027185.1 PRJNA224116 SAMEA2272396 na na 637909 315405 Streptococcus gallolyticus UCN34 strain=UCN34 na latest Complete Genome Major Full 2010-02-11 ASM2718v1 Institut Pasteur GCA_000027185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/185/GCF_000027185.1_ASM2718v1/ na na na haploid bacteria 2350911 2350911 37.500000 1 1 1 NCBI RefSeq GCF_000027185.1-RS_2026_02_10 2026-02-10 2344 2225 93 20139183 GCF_000027205.1 PRJNA224116 SAMEA2272701 na na 716540 552 Erwinia amylovora ATCC 49946 strain=ATCC 49946 na latest Complete Genome Major Full 2010-03-18 ASM2720v1 Wellcome Trust Sanger Institute GCA_000027205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/205/GCF_000027205.1_ASM2720v1/ na na na haploid bacteria 3905604 3905604 53.500000 3 3 3 NCBI RefSeq GCF_000027205.1-RS_2026_02_10 2026-02-10 3586 3375 122 20118253 GCF_000027225.1 PRJNA224116 SAMEA3138245 na na 406818 40576 Xenorhabdus bovienii SS-2004 strain=SS-2004 na latest Complete Genome Major Full 2010-02-18 ASM2722v1 Danforth Science Center GCA_000027225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/225/GCF_000027225.1_ASM2722v1/ na na na haploid bacteria 4225498 4225498 45.000000 1 1 1 NCBI RefSeq GCF_000027225.1-RS_2025_05_23 2025-05-23 3943 3586 109 22125637 GCF_000027265.1 PRJNA224116 SAMEA2272200 na na 634499 79967 Erwinia pyrifoliae Ep1/96 strain=Ep1/96 na latest Complete Genome Major Full 2010-03-05 ASM2726v1 Max Planck Society GCA_000027265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/265/GCF_000027265.1_ASM2726v1/ na na na haploid bacteria 4072846 4072846 53.500000 5 5 5 NCBI RefSeq GCF_000027265.1-RS_2025_07_15 2025-07-15 3799 3523 110 20565991 GCF_000027325.1 PRJNA224116 SAMN02603983 na na 243273 2097 Mycoplasmoides genitalium G37 strain=G-37 na latest Complete Genome Major Full 2006-01-09 ASM2732v1 TIGR GCA_000027325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/325/GCF_000027325.1_ASM2732v1/ na assembly from type material na haploid bacteria 580076 580076 31.500000 1 1 1 NCBI RefSeq GCF_000027325.1-RS_2025_12_13 2025-12-13 566 504 42 7569993;16407165 GCF_000027345.1 PRJNA224116 SAMN02603304 na na 272634 2104 Mycoplasmoides pneumoniae M129 strain=M129; ATCC 29342 na latest Complete Genome Major Full 2002-12-06 ASM2734v1 Heidelberg Univ. GCA_000027345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/027/345/GCF_000027345.1_ASM2734v1/ na na na haploid bacteria 816394 816394 40.000000 1 1 1 NCBI RefSeq GCF_000027345.1-RS_2026_02_26 2026-02-26 767 672 43 8948633;10954595 GCF_000039765.1 PRJNA224116 SAMN02603130 na na 216895 672 Vibrio vulnificus CMCP6 strain=CMCP6 na latest Complete Genome Major Full 2011-01-25 ASM3976v1 Chonnam Univ. GCA_000039765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/039/765/GCF_000039765.1_ASM3976v1/ na na na haploid bacteria 5126696 5126696 46.500000 2 2 2 NCBI RefSeq GCF_000039765.1-RS_2026_06_11 2026-06-11 4613 4403 143 14500463;21245845 GCF_000046685.1 PRJNA224116 SAMEA3138248 na na 283165 803 Bartonella quintana str. Toulouse strain=Toulouse na latest Complete Genome Major Full 2004-06-25 ASM4668v1 Uppsala Univ. GCA_000046685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/046/685/GCF_000046685.1_ASM4668v1/ na na na haploid bacteria 1581384 1581384 39.000000 1 1 1 NCBI RefSeq GCF_000046685.1-RS_2026_04_23 2026-04-23 1346 1201 52 15210978 GCF_000046705.1 PRJNA224116 SAMEA3138249 na na 283166 38323 Bartonella henselae str. Houston-1 strain=Houston-1 na latest Complete Genome Major Full 2004-06-25 ASM4670v1 Uppsala Univ. GCA_000046705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/046/705/GCF_000046705.1_ASM4670v1/ na assembly from type material na haploid bacteria 1931047 1931047 38.000000 1 1 1 NCBI RefSeq GCF_000046705.1-RS_2025_12_23 2025-12-23 1654 1504 54 15210978 GCF_000046845.1 PRJNA224116 SAMEA3138250 na reference genome 62977 202950 Acinetobacter baylyi ADP1 strain=ADP1 na latest Complete Genome Major Full 2004-06-30 ASM4684v1 Genoscope GCA_000046845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/046/845/GCF_000046845.1_ASM4684v1/ na na na haploid bacteria 3598621 3598621 40.500000 1 1 1 NCBI RefSeq GCF_000046845.1-RS_2026_03_31 2026-03-31 3357 3203 101 15514110 GCF_000047365.1 PRJNA224116 SAMEA3138251 na na 273123 633 Yersinia pseudotuberculosis IP 32953 strain=IP 32953 na latest Complete Genome Major Full 2006-06-12 ASM4736v1 Lawrence Livermore National Laboratory GCA_000047365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/047/365/GCF_000047365.1_ASM4736v1/ na na na haploid bacteria 4840898 4840898 47.500000 3 3 3 NCBI RefSeq GCF_000047365.1-RS_2026_04_04 2026-04-04 4361 4100 117 15358858 GCF_000048645.1 PRJNA224116 SAMEA3138252 na na 297246 446 Legionella pneumophila str. Paris strain=Paris na latest Complete Genome Major Full 2004-10-03 ASM4864v1 Institut Pasteur GCA_000048645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/048/645/GCF_000048645.1_ASM4864v1/ na na na haploid bacteria 3635495 3635495 38.500000 2 2 2 NCBI RefSeq GCF_000048645.1-RS_2026_02_10 2026-02-10 3275 3174 56 15467720 GCF_000048665.1 PRJNA224116 SAMEA3138253 na na 297245 446 Legionella pneumophila str. Lens strain=Lens na latest Complete Genome Major Full 2004-10-03 ASM4866v1 Institut Pasteur GCA_000048665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/048/665/GCF_000048665.1_ASM4866v1/ na na na haploid bacteria 3405519 3405519 38.500000 2 2 2 NCBI RefSeq GCF_000048665.1-RS_2026_02_10 2026-02-10 3037 2932 56 15467720 GCF_000050405.1 PRJNA224116 SAMEA3138254 na na 302409 779 Ehrlichia ruminantium str. Gardel strain=Gardel na latest Complete Genome Major Full 2005-02-01 ASM5040v1 CIRAD, France GCA_000050405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/050/405/GCF_000050405.1_ASM5040v1/ na na na haploid bacteria 1499920 1499920 27.500000 1 1 1 NCBI RefSeq GCF_000050405.1-RS_2026_01_08 2026-01-08 992 933 43 16547041 GCF_000050425.1 PRJNA224116 SAMEA3138255 na na 254945 779 Ehrlichia ruminantium str. Welgevonden strain=Welgevonden na latest Complete Genome Major Full 2005-02-01 ASM5042v1 CIRAD, France GCA_000050425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/050/425/GCF_000050425.1_ASM5042v1/ na assembly from type material na haploid bacteria 1512977 1512977 27.500000 1 1 1 NCBI RefSeq GCF_000050425.1-RS_2026_01_08 2026-01-08 994 921 43 16547041 GCF_000054005.1 PRJNA224116 SAMEA3138256 na na 359391 235 Brucella abortus 2308 strain=2308 na latest Complete Genome Major Full 2005-12-01 ASM5400v1 Oak Ridge National Laboratory GCA_000054005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/054/005/GCF_000054005.1_ASM5400v1/ na na na haploid bacteria 3278307 3278307 57.000000 2 2 2 NCBI RefSeq GCF_000054005.1-RS_2026_04_26 2026-04-26 3224 2972 68 16299333 GCF_000055785.1 PRJNA224116 SAMN02598275 na reference genome 290398 141390 Chromohalobacter israelensis DSM 3043 strain=DSM 3043 na latest Complete Genome Major Full 2006-04-11 ASM5578v1 DOE Joint Genome Institute GCA_000055785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/055/785/GCF_000055785.1_ASM5578v1/ na assembly from heterotypic synonym type material na haploid bacteria 3696649 3696649 64.000000 1 1 1 NCBI RefSeq GCF_000055785.1-RS_2025_08_18 2025-08-18 3418 3315 88 22675587 GCF_000055945.1 PRJNA224116 SAMEA3138257 na na 363253 29546 Lawsonia intracellularis PHE/MN1-00 strain=PHE/MN1-00 na latest Complete Genome Major Full 2006-05-05 ASM5594v1 Univ. Minnesota GCA_000055945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/055/945/GCF_000055945.1_ASM5594v1/ na na na haploid bacteria 1719014 1719014 33.000000 4 4 4 NCBI RefSeq GCF_000055945.1-RS_2026_02_10 2026-02-10 1501 1443 55 na GCF_000056065.1 PRJNA224116 SAMEA3138258 na na 390333 1584 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 strain=ATCC 11842 na latest Complete Genome Major Full 2006-05-26 ASM5606v1 Genoscope GCA_000056065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/056/065/GCF_000056065.1_ASM5606v1/ na assembly from type material na haploid bacteria 1864998 1864998 49.500000 1 1 1 NCBI RefSeq GCF_000056065.1-RS_2026_04_21 2026-04-21 1984 1665 125 16754859 GCF_000058485.1 PRJNA224116 SAMEA3138259 na reference genome 326424 1859 Frankia alni ACN14a strain=ACN14a na latest Complete Genome Major Full 2006-08-03 ASM5848v1 Genoscope GCA_000058485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/058/485/GCF_000058485.1_ASM5848v1/ na assembly from type material na haploid bacteria 7497934 7497934 73.000000 1 1 1 NCBI RefSeq GCF_000058485.1-RS_2025_08_31 2025-08-31 6109 5930 54 17151343 GCF_000060285.1 PRJNA224116 SAMEA3138260 na na 386043 1643 Listeria welshimeri serovar 6b str. SLCC5334 strain=SLCC5334 na latest Complete Genome Major Full 2006-10-27 ASM6028v1 Universitat Giessen GCA_000060285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/060/285/GCF_000060285.1_ASM6028v1/ na assembly from type material na haploid bacteria 2814130 2814130 36.500000 1 1 1 NCBI RefSeq GCF_000060285.1-RS_2026_02_10 2026-02-10 2852 2731 88 16936040 GCF_000060345.1 PRJNA224116 SAMEA2272667 na reference genome 411154 411153 Christiangramia forsetii KT0803 strain=KT0803 na latest Complete Genome Major Full 2006-11-06 ASM6034v1 Max Planck Institute for Molecular Genetics GCA_000060345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/060/345/GCF_000060345.1_ASM6034v1/ na assembly from type material na haploid bacteria 3798465 3798465 36.500000 1 1 1 NCBI RefSeq GCF_000060345.1-RS_2026_04_15 2026-04-15 3480 3404 58 17107561 GCF_000061505.1 PRJNA224116 SAMEA3138261 na na 418699 418699 Azoarcus olearius strain=BH72 na latest Complete Genome Major Full 2006-12-20 ASM6150v1 Bielefeld Univ GCA_000061505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/061/505/GCF_000061505.1_ASM6150v1/ na na na haploid bacteria 4376040 4376040 68.000000 1 1 1 NCBI RefSeq GCF_000061505.1-RS_2026_02_06 2026-02-06 4067 3982 71 17057704 GCF_000062885.1 PRJNA224116 SAMEA2272514 na reference genome 405948 1836 Saccharopolyspora erythraea NRRL 2338 strain=NRRL 2338 na latest Complete Genome Major Full 2007-03-21 ASM6288v1 Department of Biochemistry, University of Cambridge GCA_000062885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/062/885/GCF_000062885.1_ASM6288v1/ na assembly from type material na haploid bacteria 8212805 8212805 71.000000 1 1 1 NCBI RefSeq GCF_000062885.1-RS_2026_04_06 2026-04-06 7335 7108 65 17369815 GCF_000063445.1 PRJNA224116 SAMEA3138262 na reference genome 351160 1175445 Methanocella arvoryzae MRE50 strain=MRE50 na latest Complete Genome Major Full 2006-10-12 ASM6344v1 Max Planck Institute GCA_000063445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/063/445/GCF_000063445.1_ASM6344v1/ na assembly from type material na haploid archaea 3179916 3179916 54.500000 1 1 1 NCBI RefSeq GCF_000063445.1-RS_2025_11_20 2025-11-20 3199 3125 62 16857943 GCF_000063485.1 PRJNA224116 SAMEA3138263 na na 443906 28447 Clavibacter michiganensis subsp. michiganensis NCPPB 382 strain=NCPPB 382 na latest Complete Genome Major Full 2007-05-19 ASM6348v1 Center For Biotechnology, Bielefeld University, Germany GCA_000063485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/063/485/GCF_000063485.1_ASM6348v1/ na na na haploid bacteria 3395237 3395237 72.500000 3 3 3 NCBI RefSeq GCF_000063485.1-RS_2026_02_10 2026-02-10 3231 3161 55 18192381 GCF_000063545.1 PRJNA224116 SAMEA3138266 na na 357244 784 Orientia tsutsugamushi str. Boryong strain=Boryong na latest Complete Genome Major Full 2007-05-15 ASM6354v1 Seoul National University College of Medicine GCA_000063545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/063/545/GCF_000063545.1_ASM6354v1/ na na na haploid bacteria 2127051 2127051 30.500000 1 1 1 NCBI RefSeq GCF_000063545.1-RS_2025_01_08 2025-01-08 2291 1667 40 17483455 GCF_000063585.1 PRJNA224116 SAMEA1705919 na reference genome 413999 1491 Clostridium botulinum A str. ATCC 3502 strain=ATCC 3502 na latest Complete Genome Major Full 2007-05-24 ASM6358v1 Sanger Institute GCA_000063585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/063/585/GCF_000063585.1_ASM6358v1/ na na na haploid bacteria 3903260 3903260 28.000000 2 2 2 NCBI RefSeq GCF_000063585.1-RS_2026_04_14 2026-04-14 3708 3547 111 17519437 GCF_000063605.1 PRJNA224116 SAMEA3138268 na reference genome 347257 2110 Mycoplasmopsis agalactiae PG2 strain=PG2 na latest Complete Genome Major Full 2007-05-24 ASM6360v1 Genoscope GCA_000063605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/063/605/GCF_000063605.1_ASM6360v1/ na assembly from type material na haploid bacteria 877438 877438 29.500000 1 1 1 NCBI RefSeq GCF_000063605.1-RS_2025_12_13 2025-12-13 794 721 43 na GCF_000064305.2 PRJNA224116 SAMEA3138269 na na 402612 96345 Flavobacterium psychrophilum JIP02/86 strain=JIP02/86 na latest Complete Genome Major Full 2013-05-30 ASM6430v2 I.N.R.A., FRANCE GCA_000064305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/064/305/GCF_000064305.2_ASM6430v2/ na na na haploid bacteria 2860382 2860382 32.500000 1 1 1 NCBI RefSeq GCF_000064305.2-RS_2025_12_06 2025-12-06 2553 2467 70 17592475 GCF_000067045.1 PRJNA224116 SAMEA3138270 na na 272568 33996 Gluconacetobacter diazotrophicus PA1 5 strain=PAl 5 na latest Complete Genome Major Full 2007-12-05 ASM6704v1 FAPERJ - RioGene GCA_000067045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/067/045/GCF_000067045.1_ASM6704v1/ na assembly from type material na haploid bacteria 3999591 3999591 66.500000 3 3 3 NCBI RefSeq GCF_000067045.1-RS_2024_12_15 2024-12-15 3828 3589 71 19775431 GCF_000067165.1 PRJNA224116 SAMEA3138271 na reference genome 448385 56 Sorangium cellulosum So ce56 strain=So ce 56 na latest Complete Genome Major Full 2007-11-27 ASM6716v1 Bielefeld Univ GCA_000067165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/067/165/GCF_000067165.1_ASM6716v1/ na na na haploid bacteria 13033779 13033779 71.500000 1 1 1 NCBI RefSeq GCF_000067165.1-RS_2026_03_31 2026-03-31 9755 9564 81 17965706 GCF_000067205.1 PRJNA224116 SAMEA3138272 na reference genome 94624 94624 Bordetella petrii strain=DSM 12804 na latest Complete Genome Major Full 2007-12-18 ASM6720v1 Bielefeld Univ GCA_000067205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/067/205/GCF_000067205.1_ASM6720v1/ na assembly from type material na haploid bacteria 5287950 5287950 65.500000 1 1 1 NCBI RefSeq GCF_000067205.1-RS_2025_12_11 2025-12-11 5123 4955 64 18826580 GCF_000068525.2 PRJNA224116 SAMEA1705954 na na 471473 813 Chlamydia trachomatis L2b/UCH-1/proctitis strain=UCH-1 na latest Complete Genome Major Full 2011-09-14 ASM6852v2 Welcome Trust Sanger Institute GCA_000068525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/068/525/GCF_000068525.2_ASM6852v2/ na na na haploid bacteria 1038863 1038863 41.500000 1 1 1 NCBI RefSeq GCF_000068525.2-RS_2025_03_15 2025-03-15 947 881 46 18032721 GCF_000068585.1 PRJNA224116 SAMEA1705923 na na 471472 813 Chlamydia trachomatis L2/434/Bu strain=L2/434/Bu na latest Complete Genome Major Full 2008-01-17 ASM6858v1 Wellcome Trust Sanger Institute GCA_000068585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/068/585/GCF_000068585.1_ASM6858v1/ na na na haploid bacteria 1038842 1038842 41.500000 1 1 1 NCBI RefSeq GCF_000068585.1-RS_2025_03_20 2025-03-20 947 880 46 18032721 GCF_000069025.1 PRJNA224116 SAMEA3138275 na na 478009 2242 Halobacterium salinarum R1 strain=DSM 671 = R1 na latest Complete Genome Major Full 2008-02-12 ASM6902v1 Max Planck Institute GCA_000069025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/025/GCF_000069025.1_ASM6902v1/ na na na haploid archaea 2668776 2668776 65.500000 5 5 5 NCBI RefSeq GCF_000069025.1-RS_2025_12_04 2025-12-04 2838 2713 52 18313895 GCF_000069185.1 PRJNA224116 SAMEA3138276 na reference genome 561007 36809 Mycobacteroides abscessus ATCC 19977 strain=ATCC 19977 na latest Complete Genome Major Full 2008-03-01 ASM6918v1 Genoscope GCA_000069185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/185/GCF_000069185.1_ASM6918v1/ na assembly from type material na haploid bacteria 5090491 5090491 64.000000 2 2 2 NCBI RefSeq GCF_000069185.1-RS_2026_03_09 2026-03-09 5048 4960 53 19543527 GCF_000069225.1 PRJNA224116 SAMEA1705948 na reference genome 31964 31964 Clavibacter sepedonicus strain=ATCC 33113 na latest Complete Genome Major Full 2008-02-29 ASM6922v1 Sanger Institute GCA_000069225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/225/GCF_000069225.1_ASM6922v1/ na assembly from type material na haploid bacteria 3403786 3403786 72.500000 3 3 3 NCBI RefSeq GCF_000069225.1-RS_2025_12_10 2025-12-10 3311 3191 54 18192393 GCF_000069245.1 PRJNA224116 SAMEA3138279 na na 509173 470 Acinetobacter baumannii AYE strain=AYE na latest Complete Genome Major Full 2008-02-29 ASM6924v1 Genoscope GCA_000069245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/245/GCF_000069245.1_ASM6924v1/ na na na haploid bacteria 4048735 4048735 39.500000 5 5 5 NCBI RefSeq GCF_000069245.1-RS_2025_07_15 2025-07-15 3902 3696 94 18350144 GCF_000069785.1 PRJNA224116 SAMEA3138280 na reference genome 977880 164546 Cupriavidus taiwanensis LMG 19424 strain=LMG 19424 na latest Chromosome Major Full 2008-03-27 ASM6978v1 Genoscope GCA_000069785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/785/GCF_000069785.1_ASM6978v1/ na assembly from type material na haploid bacteria 6476522 6476359 67.000000 3 3 5 NCBI RefSeq GCF_000069785.1-RS_2025_12_09 2025-12-09 5920 5726 84 18490699 GCF_000069945.1 PRJNA224116 SAMEA3138282 na na 504474 43771 Corynebacterium urealyticum DSM 7109 strain=DSM 7109 na latest Complete Genome Major Full 2008-04-02 ASM6994v1 Bielefeld Univ GCA_000069945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/945/GCF_000069945.1_ASM6994v1/ na assembly from type material na haploid bacteria 2369219 2369219 64.000000 1 1 1 NCBI RefSeq GCF_000069945.1-RS_2026_02_10 2026-02-10 2078 1974 63 18367281 GCF_000069965.1 PRJNA224116 SAMEA1705945 na reference genome 529507 584 Proteus mirabilis HI4320 strain=HI4320 na latest Complete Genome Major Full 2008-04-03 ASM6996v1 Sanger Institute GCA_000069965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/965/GCF_000069965.1_ASM6996v1/ na na na haploid bacteria 4099895 4099895 39.000000 2 2 2 NCBI RefSeq GCF_000069965.1-RS_2025_07_15 2025-07-15 3803 3632 109 18375554 GCF_000070465.1 PRJNA224116 SAMEA1705952 na na 360910 521 Bordetella avium 197N strain=197N na latest Complete Genome Major Full 2006-09-29 ASM7046v1 Sanger Institute GCA_000070465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/070/465/GCF_000070465.1_ASM7046v1/ na na na haploid bacteria 3732255 3732255 61.500000 1 1 1 NCBI RefSeq GCF_000070465.1-RS_2026_02_06 2026-02-06 3454 3337 75 16885469 GCF_000072485.1 PRJNA224116 SAMEA1705934 na na 522373 40324 Stenotrophomonas maltophilia K279a strain=K279a na latest Complete Genome Major Full 2008-06-10 ASM7248v1 Wellcome Trust Sanger Institute GCA_000072485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/072/485/GCF_000072485.1_ASM7248v1/ na na na haploid bacteria 4851126 4851126 66.500000 1 1 1 NCBI RefSeq GCF_000072485.1-RS_2026_05_07 2026-05-07 4513 4381 90 18419807 GCF_000073005.1 PRJNA224116 SAMEA1705930 na reference genome 570417 263437 Wolbachia endosymbiont of Culex quinquefasciatus Pel strain=wPip na latest Chromosome Major Full 2008-06-13 ASM7300v1 Wellcome Trust Sanger Institute GCA_000073005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/073/005/GCF_000073005.1_ASM7300v1/ na na na haploid bacteria 1482455 1482355 34.000000 1 1 2 NCBI RefSeq GCF_000073005.1-RS_2026_01_08 2026-01-08 1396 1247 41 18550617 GCF_000083545.1 PRJNA224116 SAMEA3138288 na reference genome 661410 408 Methylorubrum extorquens DM4 strain=DM4 na latest Complete Genome Major Full 2009-07-17 ASM8354v1 Genoscope GCA_000083545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/083/545/GCF_000083545.1_ASM8354v1/ na assembly from heterotypic synonym type material na haploid bacteria 6123851 6123851 68.000000 3 3 3 NCBI RefSeq GCF_000083545.1-RS_2026_05_16 2026-05-16 5827 5570 77 na GCF_000083565.1 PRJNA224116 SAMEA3138289 na na 662598 487 Neisseria meningitidis alpha14 strain=alpha14 na latest Complete Genome Major Full 2009-07-23 ASM8356v1 Bielefeld University GCA_000083565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/083/565/GCF_000083565.1_ASM8356v1/ na na na haploid bacteria 2145295 2145295 52.000000 1 1 1 NCBI RefSeq GCF_000083565.1-RS_2026_02_16 2026-02-16 2140 1900 74 18305155 GCF_000085225.1 PRJNA224116 SAMEA3138290 na na 645462 1496 Clostridioides difficile CD196 strain=CD196 na latest Complete Genome Major Full 2009-10-01 ASM8522v1 Wellcome Trust Sanger Institute GCA_000085225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/085/225/GCF_000085225.1_ASM8522v1/ na na na haploid bacteria 4110554 4110554 28.500000 1 1 1 NCBI RefSeq GCF_000085225.1-RS_2026_02_28 2026-02-28 3755 3587 117 19781061 GCF_000085865.1 PRJNA224116 SAMEA2272593 na na 347256 2098 Metamycoplasma hominis ATCC 23114 strain=ATCC 23114 na latest Complete Genome Major Full 2009-11-16 ASM8586v1 Genoscope GCA_000085865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/085/865/GCF_000085865.1_ASM8586v1/ na assembly from type material na haploid bacteria 665445 665445 27.000000 1 1 1 NCBI RefSeq GCF_000085865.1-RS_2026_04_01 2026-04-01 601 550 42 19816563 GCF_000087965.2 PRJNA224116 SAMEA3138291 na na 380358 29447 Xanthomonas albilineans GPE PC73 strain=GPE PC73 na latest Complete Genome Major Full 2010-05-05 ASM8796v1 Genoscope GCA_000087965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/087/965/GCF_000087965.2_ASM8796v1/ na na na haploid bacteria 3852299 3852299 63.000000 4 4 4 NCBI RefSeq GCF_000087965.2-RS_2026_05_07 2026-05-07 3328 3126 84 20017926 GCF_000090405.2 PRJNA224116 SAMEA3138292 na na 761659 146919 Salinibacter ruber M8 strain=M8 na latest Complete Genome Major Full 2010-05-11 ASM9040v2 Genoscope GCA_000090405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/405/GCF_000090405.2_ASM9040v2/ na na na haploid bacteria 3832918 3832918 66.000000 5 5 5 NCBI RefSeq GCF_000090405.1-RS_2025_09_28 2025-09-28 3240 3152 51 20164864 GCF_000090875.1 PRJNA224116 SAMN02463843 ADEA00000000.1 na 641149 641148 Neisseria sp. oral taxon 014 str. F0314 strain=F0314 na latest Scaffold Major Full 2010-06-14 ASM9087v1 Broad Institute GCA_000090875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/875/GCF_000090875.1_ASM9087v1/ na na na haploid bacteria 2515760 2502635 53.000000 1 11 48 NCBI RefSeq GCF_000090875.1-RS_2024_06_11 2024-06-11 2423 2308 65 na GCF_000090945.1 PRJNA224116 SAMN02463827 ADCS00000000.1 na 575609 652713 Peptoniphilus sp. oral taxon 386 str. F0131 strain=F0131 na latest Scaffold Major Full 2010-06-17 ASM9094v1 Broad Institute GCA_000090945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/945/GCF_000090945.1_ASM9094v1/ na na na haploid bacteria 1569385 1550062 31.000000 1 11 72 NCBI RefSeq GCF_000090945.1-RS_2024_08_12 2024-08-12 1550 1463 57 na GCF_000090965.1 PRJNA224116 SAMN02604290 na na 372461 9 Buchnera aphidicola BCc strain=BCc na latest Complete Genome Major Full 2006-10-18 ASM9096v1 Valencia Univ. GCA_000090965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/965/GCF_000090965.1_ASM9096v1/ na na na haploid bacteria 422434 422434 20.000000 2 2 2 NCBI RefSeq GCF_000090965.1-RS_2025_03_11 2025-03-11 408 369 37 16413149;17038625 GCF_000091005.1 PRJNA224116 SAMD00060955 na na 573235 562 Escherichia coli O26:H11 str. 11368 strain=11368 na latest Complete Genome Major Full 2009-09-10 ASM9100v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000091005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/005/GCF_000091005.1_ASM9100v1/ na na na haploid bacteria 5855531 5855531 50.500000 5 5 5 NCBI RefSeq GCF_000091005.1-RS_2025_06_23 2025-06-23 6033 5558 134 19815525 GCF_000091025.4 PRJNA10623 SAMN03081415 na reference genome 284811 33169 Eremothecium gossypii ATCC 10895 strain=ATCC 10895 na latest Complete Genome Major Full 2010-10-18 ASM9102v4 Biozentrum, University of Basel, Switzerland GCA_000091025.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/025/GCF_000091025.4_ASM9102v4/ na na na haploid fungi 9095748 9095748 52.000000 7 7 7 Biozentrum, University of Basel, Switzerland Annotation submitted by Biozentrum, University of Basel, Switzerland 2025-07-15 5317 4776 538 15001715 GCF_000091045.1 PRJNA10698 SAMN03081418 na reference genome 214684 40410 Cryptococcus deneoformans JEC21 strain=JEC21 na latest Chromosome Major Full 2005-01-07 ASM9104v1 TIGR GCA_000091045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/045/GCF_000091045.1_ASM9104v1/ na na na haploid fungi 19051922 19050125 48.500000 14 14 37 TIGR Annotation submitted by TIGR 2018-04-11 7004 6632 134 15653466 GCF_000091085.2 PRJNA224116 SAMN02641564 na na 115711 83558 Chlamydia pneumoniae AR39 strain=AR39 na latest Complete Genome Major Full 2001-01-09 ASM9108v2 TIGR GCA_000091085.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/085/GCF_000091085.2_ASM9108v2/ na na na haploid bacteria 1229853 1229853 40.500000 1 1 1 NCBI RefSeq GCF_000091085.2-RS_2025_07_07 2025-07-07 1093 1037 44 10684935 GCF_000091125.1 PRJNA224116 SAMD00060927 na reference genome 452662 332055 Sphingobium indicum UT26S strain=UT26S na latest Complete Genome Major Full 2010-03-31 ASM9112v1 National Institute of Technology and Evaluation (NITE) GCA_000091125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/125/GCF_000091125.1_ASM9112v1/ na assembly from heterotypic synonym type material na haploid bacteria 4424862 4424862 65.000000 5 5 5 NCBI RefSeq GCF_000091125.1-RS_2025_12_22 2025-12-22 4257 4136 67 20817768 GCF_000091225.2 PRJNA155 SAMEA3138295 na reference genome 284813 6035 Encephalitozoon cuniculi GB-M1 na GB-M1 latest Chromosome Major Full 2017-03-09 ASM9122v2 Genoscope GCA_000091225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/225/GCF_000091225.2_ASM9122v2/ na na na haploid fungi 2497519 2496719 47.500000 11 11 12 Genoscope Annotation submitted by Genoscope 2022-12-22 2155 2122 33 11719806;20003517 GCF_000091305.1 PRJNA224116 SAMEA2272773 na na 680198 1930 Streptomyces scabiei 87.22 strain=87.22 na latest Complete Genome Major Full 2009-10-06 ASM9130v1 Wellcome Trust Sanger Institute GCA_000091305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/305/GCF_000091305.1_ASM9130v1/ na na na haploid bacteria 10148695 10148695 71.500000 1 1 1 NCBI RefSeq GCF_000091305.1-RS_2025_12_12 2025-12-12 8908 8605 94 20064060 GCF_000091325.1 PRJNA224116 SAMD00060963 na reference genome 637905 60217 Shewanella violacea DSS12 strain=DSS12 na latest Complete Genome Major Full 2010-04-01 ASM9132v1 Nara Institute of Science and Technology GCA_000091325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/325/GCF_000091325.1_ASM9132v1/ na assembly from type material na haploid bacteria 4962103 4962103 44.500000 1 1 1 NCBI RefSeq GCF_000091325.1-RS_2025_12_11 2025-12-11 4168 3918 174 na GCF_000091345.1 PRJNA224116 SAMEA3138296 na na 592205 210 Helicobacter pylori B38 strain=B38 na latest Complete Genome Major Full 2009-07-15 ASM9134v1 Institut Pasteur GCA_000091345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/345/GCF_000091345.1_ASM9134v1/ na na na haploid bacteria 1576758 1576758 39.000000 1 1 1 NCBI RefSeq GCF_000091345.1-RS_2026_02_10 2026-02-10 1537 1413 46 20537153 GCF_000091405.1 PRJNA224116 SAMEA2272487 na na 633699 33959 Lactobacillus johnsonii FI9785 strain=FI9785 na latest Complete Genome Major Full 2009-11-04 ASM9140v1 Institute of Food Research GCA_000091405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/405/GCF_000091405.1_ASM9140v1/ na na na haploid bacteria 1785116 1785116 34.500000 3 3 3 NCBI RefSeq GCF_000091405.1-RS_2026_04_17 2026-04-17 1775 1626 68 14962040;16122563;19767436 GCF_000091465.1 PRJNA224116 SAMEA2271989 na na 693153 693153 Vibrio atlanticus strain=LGP32 na latest Complete Genome Major Full 2009-02-13 ASM9146v1 Institut Pasteur GCA_000091465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/465/GCF_000091465.1_ASM9146v1/ na na na haploid bacteria 4974818 4974818 44.000000 2 2 2 NCBI RefSeq GCF_000091465.1-RS_2026_02_06 2026-02-06 4412 4190 143 na GCF_000091545.1 PRJNA224116 SAMD00061070 na reference genome 300852 274 Thermus thermophilus HB8 strain=HB8 na latest Complete Genome Major Full 2004-11-15 ASM9154v1 National Institute of Advanced Industrial Science and Technology, Japan GCA_000091545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/545/GCF_000091545.1_ASM9154v1/ na assembly from type material na haploid bacteria 2116056 2116056 69.500000 3 3 3 NCBI RefSeq GCF_000091545.1-RS_2025_12_11 2025-12-11 2285 2168 57 na GCF_000091565.1 PRJNA224116 SAMEA3138297 na na 665029 552 Erwinia amylovora CFBP1430 strain=CFPB1430 na latest Complete Genome Major Full 2010-03-25 ASM9156v1 Bielefeld Univ GCA_000091565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/565/GCF_000091565.1_ASM9156v1/ na na na haploid bacteria 3833832 3833832 53.500000 2 2 2 NCBI RefSeq GCF_000091565.1-RS_2025_12_20 2025-12-20 3506 3295 121 20192826 GCF_000091645.1 PRJNA224116 SAMD00060939 na na 511691 1309 Streptococcus mutans NN2025 strain=NN2025 na latest Complete Genome Major Full 2009-07-31 ASM9164v1 The Institute of Medical Science, Tokyo University GCA_000091645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/645/GCF_000091645.1_ASM9164v1/ na na na haploid bacteria 2013587 2013587 37.000000 1 1 1 NCBI RefSeq GCF_000091645.1-RS_2026_02_10 2026-02-10 1982 1833 84 19656368 GCF_000091665.1 PRJNA224116 SAMN02603984 na reference genome 243232 2190 Methanocaldococcus jannaschii DSM 2661 strain=DSM 2661 na latest Complete Genome Major Full 1999-12-22 ASM9166v1 TIGR GCA_000091665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/665/GCF_000091665.1_ASM9166v1/ na assembly from type material na haploid archaea 1739927 1739927 31.500000 3 3 3 NCBI RefSeq GCF_000091665.1-RS_2025_11_21 2025-11-21 1907 1811 45 8688087 GCF_000091725.1 PRJNA224116 SAMEA2272304 na na 754252 1744 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 strain=CIRM-B1AI na latest Complete Genome Major Full 2010-05-26 ASM9172v1 I.N.R.A., French National Institute for Agricultural Research GCA_000091725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/725/GCF_000091725.1_ASM9172v1/ na na na haploid bacteria 2616384 2616384 67.500000 1 1 1 NCBI RefSeq GCF_000091725.1-RS_2025_04_04 2025-04-04 2348 2237 54 20668525 GCF_000091765.1 PRJNA224116 SAMEA2272191 na na 748671 47770 Lactobacillus crispatus ST1 strain=ST1 na latest Chromosome Major Full 2010-04-22 ASM9176v1 Institute of Biotechnology, University of Helsinki, Finland GCA_000091765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/765/GCF_000091765.1_ASM9176v1/ na na na haploid bacteria 2043161 2042571 37.000000 1 1 2 NCBI RefSeq GCF_000091765.1-RS_2026_02_16 2026-02-16 2050 1884 79 20435723 GCF_000091785.1 PRJNA224116 SAMEA2272007 na reference genome 661367 450 Legionella longbeachae NSW150 strain=NSW150 na latest Complete Genome Major Full 2010-02-13 ASM9178v1 Institut Pasteur - Unite de Biologie des Bacteries Intracellulaires GCA_000091785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/785/GCF_000091785.1_ASM9178v1/ na na na haploid bacteria 4149158 4149158 37.000000 2 2 2 NCBI RefSeq GCF_000091785.1-RS_2026_02_02 2026-02-02 3628 3497 62 20174605 GCF_000091905.1 PRJNA224116 SAMEA3138299 na na 218494 1307 Streptococcus suis P1/7 strain=P1/7 na latest Complete Genome Major Full 2009-07-07 ASM9190v1 Sanger Institute GCA_000091905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/905/GCF_000091905.1_ASM9190v1/ na na na haploid bacteria 2007491 2007491 41.500000 1 1 1 NCBI RefSeq GCF_000091905.1-RS_2025_04_18 2025-04-18 1956 1835 72 19603075 GCF_000091985.1 PRJNA224116 SAMEA2272735 na na 679897 217 Helicobacter mustelae 12198 strain=12198 na latest Complete Genome Major Full 2010-03-11 ASM9198v1 Wellcome Trust Sanger Institute GCA_000091985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/985/GCF_000091985.1_ASM9198v1/ na na na haploid bacteria 1578097 1578097 42.500000 1 1 1 NCBI RefSeq GCF_000091985.1-RS_2026_04_30 2026-04-30 1458 1389 48 20219135 GCF_000092025.1 PRJNA224116 SAMN02603108 na reference genome 176299 1176649 Agrobacterium fabrum str. C58 strain=C58 na latest Complete Genome Major Full 2007-11-05 ASM9202v1 Cereon GCA_000092025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/025/GCF_000092025.1_ASM9202v1/ na assembly from type material na haploid bacteria 5674258 5674258 59.000000 4 4 4 NCBI RefSeq GCF_000092025.1-RS_2026_04_23 2026-04-23 5338 5178 71 11743193;11743194 GCF_000092045.1 PRJNA224116 SAMN02603106 na reference genome 347834 29449 Rhizobium etli CFN 42 strain=CFN 42 na latest Complete Genome Major Full 2006-03-06 ASM9204v1 Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico GCA_000092045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/045/GCF_000092045.1_ASM9204v1/ na assembly from type material na haploid bacteria 6530228 6530228 61.000000 7 7 7 NCBI RefSeq GCF_000092045.1-RS_2025_11_29 2025-11-29 6363 5992 63 2013564;9274036;12421308;16505379 GCF_000092105.1 PRJNA224116 SAMN02598463 na reference genome 521674 120 Planctopirus limnophila DSM 3776 strain=DSM 3776 na latest Complete Genome Major Full 2010-05-13 ASM9210v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/105/GCF_000092105.1_ASM9210v1/ na assembly from type material na haploid bacteria 5460085 5460085 53.500000 2 2 2 NCBI RefSeq GCF_000092105.1-RS_2025_11_20 2025-11-20 4130 4043 74 21304691 GCF_000092125.1 PRJNA224116 SAMN02598469 na reference genome 526227 52022 Allomeiothermus silvanus DSM 9946 strain=DSM 9946 na latest Complete Genome Major Full 2010-05-26 ASM9212v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/125/GCF_000092125.1_ASM9212v1/ na assembly from type material na haploid bacteria 3721669 3721669 62.500000 3 3 3 NCBI RefSeq GCF_000092125.1-RS_2026_03_12 2026-03-12 3752 3564 56 21304690 GCF_000092165.1 PRJNA224116 SAMN02603314 na na 714359 1428 Bacillus thuringiensis BMB171 strain=BMB171 na latest Complete Genome Major Full 2010-05-20 ASM9216v1 Huazhong Agricultural University GCA_000092165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/165/GCF_000092165.1_ASM9216v1/ na na na haploid bacteria 5643051 5643051 35.000000 2 2 2 NCBI RefSeq GCF_000092165.1-RS_2026_05_17 2026-05-17 5770 5419 149 20525827 GCF_000092185.1 PRJNA224116 SAMN02598509 na reference genome 633148 54254 Thermosphaera aggregans DSM 11486 strain=DSM 11486 na latest Complete Genome Major Full 2010-05-17 ASM9218v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/185/GCF_000092185.1_ASM9218v1/ na assembly from type material na haploid archaea 1316595 1316595 46.500000 1 1 1 NCBI RefSeq GCF_000092185.1-RS_2026_05_01 2026-05-01 1462 1399 50 21304709 GCF_000092205.1 PRJNA224116 SAMN02598502 na reference genome 589865 427923 Desulfurivibrio alkaliphilus AHT 2 strain=AHT 2 na latest Complete Genome Major Full 2010-05-27 ASM9220v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/205/GCF_000092205.1_ASM9220v1/ na assembly from type material na haploid bacteria 3097763 3097763 60.500000 1 1 1 NCBI RefSeq GCF_000092205.1-RS_2026_07_03 2026-07-03 2737 2647 57 na GCF_000092225.1 PRJNA224116 SAMN00002597 na reference genome 521096 2061 Tsukamurella paurometabola DSM 20162 strain=DSM 20162 na latest Complete Genome Major Full 2010-05-13 ASM9222v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/225/GCF_000092225.1_ASM9222v1/ na assembly from type material na haploid bacteria 4479724 4479724 68.500000 2 2 2 NCBI RefSeq GCF_000092225.1-RS_2026_05_01 2026-05-01 4369 4242 57 21886861 GCF_000092245.1 PRJNA224116 SAMN02598489 na reference genome 572480 28199 Arcobacter nitrofigilis DSM 7299 strain=DSM 7299 na latest Complete Genome Major Full 2010-05-17 ASM9224v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/245/GCF_000092245.1_ASM9224v1/ na assembly from type material na haploid bacteria 3192235 3192235 28.500000 1 1 1 NCBI RefSeq GCF_000092245.1-RS_2025_12_10 2025-12-10 3200 3119 69 21304714 GCF_000092265.1 PRJNA224116 SAMN02603777 na na 1236608 480 Moraxella catarrhalis BBH18 strain=BBH18 na latest Complete Genome Major Full 2010-05-11 ASM9226v1 Radboud University Nijmegen Medical Centre GCA_000092265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/265/GCF_000092265.1_ASM9226v1/ na na na haploid bacteria 1863286 1863286 41.500000 1 1 1 NCBI RefSeq GCF_000092265.1-RS_2025_12_03 2025-12-03 1738 1640 66 20453089 GCF_000092285.1 PRJNA224116 SAMN02598513 na na 509190 88688 Caulobacter segnis ATCC 21756 strain=ATCC 21756 na latest Complete Genome Major Full 2010-04-30 ASM9228v1 US DOE Joint Genome Institute GCA_000092285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/285/GCF_000092285.1_ASM9228v1/ na assembly from type material na haploid bacteria 4655622 4655622 67.500000 1 1 1 NCBI RefSeq GCF_000092285.1-RS_2025_12_23 2025-12-23 4439 4179 61 na GCF_000092305.1 PRJNA224116 SAMN00017484 na reference genome 573063 67760 Methanocaldococcus infernus ME strain=ME na latest Complete Genome Major Full 2010-04-30 ASM9230v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/305/GCF_000092305.1_ASM9230v1/ na assembly from type material na haploid archaea 1328194 1328194 33.500000 1 1 1 NCBI RefSeq GCF_000092305.1-RS_2025_11_20 2025-11-20 1510 1450 46 na GCF_000092325.1 PRJNA224116 SAMN02603181 na na 759350 216816 Bifidobacterium longum subsp. longum JDM301 strain=JDM301 na latest Complete Genome Major Full 2010-05-18 ASM9232v1 Department of Medical Microbiology and Parasitology,Shanghai Jiao Tong University School of Medicine GCA_000092325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/325/GCF_000092325.1_ASM9232v1/ na na na haploid bacteria 2477838 2477838 60.000000 1 1 1 NCBI RefSeq GCF_000092325.1-RS_2026_03_27 2026-03-27 2105 1955 67 20525832 GCF_000092365.1 PRJNA224116 SAMN02598519 na na 644284 28264 Arcanobacterium haemolyticum DSM 20595 strain=DSM 20595 na latest Complete Genome Major Full 2010-05-27 ASM9236v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/365/GCF_000092365.1_ASM9236v1/ na assembly from type material na haploid bacteria 1986154 1986154 53.000000 1 1 1 NCBI RefSeq GCF_000092365.1-RS_2025_11_24 2025-11-24 1865 1775 65 21304742 GCF_000092385.1 PRJNA224116 SAMN02603683 na na 749414 379067 Streptomyces bingchenggensis BCW-1 strain=BCW-1 na latest Complete Genome Major Full 2010-05-28 ASM9238v1 Northeast Agricultural University GCA_000092385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/385/GCF_000092385.1_ASM9238v1/ na na na haploid bacteria 11936683 11936683 71.000000 1 1 1 NCBI RefSeq GCF_000092385.1-RS_2025_04_26 2025-04-26 10188 9702 89 20581206 GCF_000092405.1 PRJNA224116 SAMN02598518 na reference genome 643648 86170 Syntrophothermus lipocalidus DSM 12680 strain=DSM 12680 na latest Complete Genome Major Full 2010-05-28 ASM9240v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/405/GCF_000092405.1_ASM9240v1/ na assembly from type material na haploid bacteria 2405559 2405559 51.000000 1 1 1 NCBI RefSeq GCF_000092405.1-RS_2026_04_14 2026-04-14 2417 2343 56 21304731 GCF_000092425.1 PRJNA224116 SAMN02598522 na reference genome 649638 332249 Truepera radiovictrix DSM 17093 strain=DSM 17093 na latest Complete Genome Major Full 2010-05-28 ASM9242v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/425/GCF_000092425.1_ASM9242v1/ na assembly from type material na haploid bacteria 3260398 3260398 68.000000 1 1 1 NCBI RefSeq GCF_000092425.1-RS_2026_05_01 2026-05-01 3054 2974 54 21475591 GCF_000092445.1 PRJNA224116 SAMN02598534 na na 691437 691437 Geobacillus sp. C56-T3 strain=C56-T3 na latest Complete Genome Major Full 2010-06-01 ASM9244v1 US DOE Joint Genome Institute GCA_000092445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/445/GCF_000092445.1_ASM9244v1/ na na na haploid bacteria 3650813 3650813 52.500000 1 1 1 NCBI RefSeq GCF_000092445.1-RS_2024_08_13 2024-08-13 3699 3427 118 na GCF_000092465.1 PRJNA224116 SAMN00002730 na reference genome 591019 84599 Staphylothermus hellenicus DSM 12710 strain=DSM 12710 na latest Complete Genome Major Full 2010-06-01 ASM9246v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/465/GCF_000092465.1_ASM9246v1/ na assembly from type material na haploid archaea 1580347 1580347 37.000000 1 1 1 NCBI RefSeq GCF_000092465.1-RS_2026_05_01 2026-05-01 1693 1633 50 22180806 GCF_000092485.1 PRJNA224116 SAMN00744935 na na 759363 813 Chlamydia trachomatis D-EC strain=D-EC na latest Complete Genome Major Full 2010-06-09 ASM9248v1 Integrated Genomics, Inc. GCA_000092485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/485/GCF_000092485.1_ASM9248v1/ na na na haploid bacteria 1050015 1050015 41.500000 2 2 2 NCBI RefSeq GCF_000092485.1-RS_2025_04_26 2025-04-26 958 910 46 20547745 GCF_000092505.1 PRJNA224116 SAMN02603394 na reference genome 762051 136609 Leuconostoc kimchii IMSNU 11154 strain=IMSNU 11154 na latest Complete Genome Major Full 2010-05-06 ASM9250v1 Institute of Microbiology GCA_000092505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/505/GCF_000092505.1_ASM9250v1/ na assembly from type material na haploid bacteria 2101787 2101787 38.000000 6 6 6 NCBI RefSeq GCF_000092505.1-RS_2026_04_14 2026-04-14 2151 2046 83 20494991 GCF_000092525.1 PRJNA224116 SAMN02603602 na na 300269 624 Shigella sonnei Ss046 strain=Ss046 na latest Complete Genome Major Full 2007-04-05 ASM9252v1 Microbial Genome Center of ChMPH GCA_000092525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/525/GCF_000092525.1_ASM9252v1/ na na na haploid bacteria 5055316 5055316 51.000000 5 5 5 NCBI RefSeq GCF_000092525.1-RS_2026_07_02 2026-07-02 5175 4319 130 16122562;16275786 GCF_000092545.1 PRJNA224116 SAMN02603241 na na 400673 446 Legionella pneumophila str. Corby strain=Corby na latest Complete Genome Major Full 2009-03-30 ASM9254v1 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) GCA_000092545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/545/GCF_000092545.1_ASM9254v1/ na na na haploid bacteria 3576470 3576470 38.500000 1 1 1 NCBI RefSeq GCF_000092545.1-RS_2026_01_02 2026-01-02 3226 3111 57 17888731 GCF_000092565.1 PRJNA224116 SAMN02603127 na na 189518 173 Leptospira interrogans serovar Lai str. 56601 strain=56601 na latest Complete Genome Major Full 2010-04-06 ASM9256v1 Chinese National HGC, Shanghai GCA_000092565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/565/GCF_000092565.1_ASM9256v1/ na na na haploid bacteria 4698134 4698134 35.000000 2 2 2 NCBI RefSeq GCF_000092565.1-RS_2025_12_19 2025-12-19 3884 3643 44 12712204 GCF_000092585.1 PRJNA224116 SAMN02604081 na na 710127 2096 Mycoplasmoides gallisepticum str. R(low) strain=R na latest Complete Genome Major Full 2010-01-28 ASM9258v1 Univ. Connecticut GCA_000092585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/585/GCF_000092585.1_ASM9258v1/ na na na haploid bacteria 1012800 1012800 31.500000 1 1 1 NCBI RefSeq GCF_000092585.1-RS_2026_02_26 2026-02-26 816 741 41 12949158 GCF_000092625.1 PRJNA224116 SAMN02604292 na na 423212 446 Legionella pneumophila 2300/99 Alcoy strain=2300/99 Alcoy na latest Complete Genome Major Full 2010-05-03 ASM9262v1 Valencia University and Public Health Research Superior Center (CSISP) of Valencia's Goverment, Spain GCA_000092625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/625/GCF_000092625.1_ASM9262v1/ na na na haploid bacteria 3516334 3516334 38.500000 1 1 1 NCBI RefSeq GCF_000092625.1-RS_2025_12_28 2025-12-28 3156 3054 57 20236513 GCF_000092645.1 PRJNA224116 SAMN00002587 na reference genome 469371 2006 Thermobispora bispora DSM 43833 strain=DSM 43833 na latest Complete Genome Major Full 2010-05-17 ASM9264v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/645/GCF_000092645.1_ASM9264v1/ na assembly from type material na haploid bacteria 4189976 4189976 72.500000 1 1 1 NCBI RefSeq GCF_000092645.1-RS_2026_04_21 2026-04-21 3635 3541 66 21304716 GCF_000092665.1 PRJNA224116 SAMN02603692 na na 707184 813 Chlamydia trachomatis E/150 strain=E/150 na latest Complete Genome Major Full 2010-05-21 ASM9266v1 Oregon State University GCA_000092665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/665/GCF_000092665.1_ASM9266v1/ na na na haploid bacteria 1042996 1042996 41.500000 1 1 1 NCBI RefSeq GCF_000092665.1-RS_2025_04_26 2025-04-26 951 891 46 20308297 GCF_000092685.1 PRJNA224116 SAMN02603693 na na 707185 813 Chlamydia trachomatis G/9768 strain=G/9768 na latest Complete Genome Major Full 2010-05-21 ASM9268v1 Oregon State University GCA_000092685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/685/GCF_000092685.1_ASM9268v1/ na na na haploid bacteria 1042810 1042810 41.500000 1 1 1 NCBI RefSeq GCF_000092685.1-RS_2025_04_26 2025-04-26 950 896 46 20308297 GCF_000092705.1 PRJNA224116 SAMN02603694 na na 707186 813 Chlamydia trachomatis G/11222 strain=G/11222 na latest Complete Genome Major Full 2010-05-21 ASM9270v1 Oregon State University GCA_000092705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/705/GCF_000092705.1_ASM9270v1/ na na na haploid bacteria 1042354 1042354 41.500000 1 1 1 NCBI RefSeq GCF_000092705.1-RS_2025_04_26 2025-04-26 951 899 46 20308297 GCF_000092725.1 PRJNA224116 SAMN02603695 na na 707187 813 Chlamydia trachomatis G/11074 strain=G/11074 na latest Complete Genome Major Full 2010-05-21 ASM9272v1 Oregon State University GCA_000092725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/725/GCF_000092725.1_ASM9272v1/ na na na haploid bacteria 1042875 1042875 41.500000 1 1 1 NCBI RefSeq GCF_000092725.1-RS_2025_04_26 2025-04-26 952 898 46 20308297 GCF_000092745.1 PRJNA224116 SAMN02603691 na na 707183 813 Chlamydia trachomatis E/11023 strain=E/11023 na latest Complete Genome Major Full 2010-05-21 ASM9274v1 Oregon State University GCA_000092745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/745/GCF_000092745.1_ASM9274v1/ na na na haploid bacteria 1043025 1043025 41.500000 1 1 1 NCBI RefSeq GCF_000092745.1-RS_2025_02_21 2025-02-21 951 894 46 20308297 GCF_000092765.1 PRJNA224116 SAMN02603934 na na 573236 28025 Bifidobacterium animalis subsp. lactis V9 strain=V9 na latest Complete Genome Major Full 2010-05-05 ASM9276v1 The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China GCA_000092765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/765/GCF_000092765.1_ASM9276v1/ na na na haploid bacteria 1944050 1944050 60.500000 1 1 1 NCBI RefSeq GCF_000092765.1-RS_2026_03_27 2026-03-27 1626 1543 67 20511504 GCF_000092785.1 PRJNA224116 SAMN02603402 na reference genome 716544 71667 Waddlia chondrophila WSU 86-1044 strain=WSU 86-1044 na latest Complete Genome Major Full 2010-06-03 ASM9278v1 Institute of Microbiology, University Hospital Center and University of Lausanne, Switzerland GCA_000092785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/785/GCF_000092785.1_ASM9278v1/ na assembly from type material na haploid bacteria 2131905 2131905 43.500000 2 2 2 NCBI RefSeq GCF_000092785.1-RS_2026_03_30 2026-03-30 1948 1877 46 20531937 GCF_000092805.1 PRJNA224116 SAMN02603696 na na 718219 813 Chlamydia trachomatis G/9301 strain=G/9301 na latest Complete Genome Major Full 2010-05-28 ASM9280v1 Oregon State University GCA_000092805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/805/GCF_000092805.1_ASM9280v1/ na na na haploid bacteria 1042811 1042811 41.500000 1 1 1 NCBI RefSeq GCF_000092805.1-RS_2025_02_26 2025-02-26 950 895 46 na GCF_000092825.1 PRJNA224116 SAMN02598516 na reference genome 640132 286802 Segniliparus rotundus DSM 44985 strain=DSM 44985 na latest Complete Genome Major Full 2010-05-18 ASM9282v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/825/GCF_000092825.1_ASM9282v1/ na assembly from type material na haploid bacteria 3157527 3157527 67.000000 1 1 1 NCBI RefSeq GCF_000092825.1-RS_2026_05_01 2026-05-01 3116 3025 52 21304703 GCF_000092845.1 PRJNA224116 SAMN00001910 na reference genome 526224 84378 Brachyspira murdochii DSM 12563 strain=DSM 12563 na latest Complete Genome Major Full 2010-05-13 ASM9284v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/845/GCF_000092845.1_ASM9284v1/ na assembly from type material na haploid bacteria 3241804 3241804 28.000000 1 1 1 NCBI RefSeq GCF_000092845.1-RS_2025_12_09 2025-12-09 2900 2829 41 21304710 GCF_000092865.1 PRJNA224116 SAMN02598424 na reference genome 446466 1711 Cellulomonas flavigena DSM 20109 strain=DSM 20109 na latest Complete Genome Major Full 2010-05-13 ASM9286v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/865/GCF_000092865.1_ASM9286v1/ na assembly from type material na haploid bacteria 4123179 4123179 74.500000 1 1 1 NCBI RefSeq GCF_000092865.1-RS_2026_05_01 2026-05-01 3770 3684 54 21304688 GCF_000092885.1 PRJNA224116 SAMN02598517 na reference genome 2654982 2654982 Paraburkholderia atlantica strain=CCGE1002 na latest Complete Genome Major Full 2010-04-30 ASM9288v1 US DOE Joint Genome Institute GCA_000092885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/885/GCF_000092885.1_ASM9288v1/ na na na haploid bacteria 7884858 7884858 63.500000 4 4 4 NCBI RefSeq GCF_000092885.1-RS_2026_03_27 2026-03-27 7296 6914 99 23209196 GCF_000092905.1 PRJNA224116 SAMN00017498 na reference genome 562970 33943 Kyrpidia tusciae DSM 2912 strain=DSM 2912 na latest Complete Genome Major Full 2010-04-29 ASM9290v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/905/GCF_000092905.1_ASM9290v1/ na assembly from type material na haploid bacteria 3384766 3384766 59.000000 1 1 1 NCBI RefSeq GCF_000092905.1-RS_2025_12_10 2025-12-10 3365 3229 78 22180816 GCF_000092925.1 PRJNA224116 SAMN02598514 na reference genome 639283 921 Ancylobacter novellus DSM 506 strain=DSM 506 na latest Complete Genome Major Full 2010-05-27 ASM9292v1 US DOE Joint Genome Institute GCA_000092925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/925/GCF_000092925.1_ASM9292v1/ na assembly from type material na haploid bacteria 4765023 4765023 68.000000 1 1 1 NCBI RefSeq GCF_000092925.1-RS_2026_03_03 2026-03-03 4576 4479 54 23450099 GCF_000092945.1 PRJNA224116 SAMN02598533 na reference genome 635013 278994 Thermincola carboxydiphila JR strain=JR na latest Complete Genome Major Full 2010-05-13 ASM9294v1 US DOE Joint Genome Institute GCA_000092945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/945/GCF_000092945.1_ASM9294v1/ na assembly from heterotypic synonym type material na haploid bacteria 3157416 3157416 46.000000 1 1 1 NCBI RefSeq GCF_000092945.1-RS_2026_06_12 2026-06-12 3122 3035 65 na GCF_000092965.1 PRJNA224116 SAMN02598500 na reference genome 583358 583357 Thermoanaerobacter mathranii subsp. mathranii str. A3 strain=A3 na latest Complete Genome Major Full 2010-05-26 ASM9296v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/965/GCF_000092965.1_ASM9296v1/ na assembly from type material na haploid bacteria 2306092 2306092 34.500000 1 1 1 NCBI RefSeq GCF_000092965.1-RS_2025_12_13 2025-12-13 2338 2204 75 na GCF_000092985.1 PRJNA224116 SAMN02598425 na na 446468 2014 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 strain=DSM 43111 na latest Complete Genome Major Full 2010-05-26 ASM9298v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000092985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/985/GCF_000092985.1_ASM9298v1/ na assembly from type material na haploid bacteria 6543312 6543312 72.500000 2 2 2 NCBI RefSeq GCF_000092985.1-RS_2025_12_03 2025-12-03 5605 5481 75 21304737 GCF_000093005.1 PRJNA224116 SAMN00014120 na na 759364 813 Chlamydia trachomatis D-LC strain=D-LC na latest Complete Genome Major Full 2010-06-09 ASM9300v1 Integrated Genomics, Inc. GCA_000093005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/005/GCF_000093005.1_ASM9300v1/ na na na haploid bacteria 1050013 1050013 41.500000 2 2 2 NCBI RefSeq GCF_000093005.1-RS_2025_04_15 2025-04-15 957 909 46 20547745 GCF_000093025.1 PRJNA224116 SAMN02598526 na reference genome 666681 1055487 Methylotenera versatilis 301 strain=301 na latest Complete Genome Major Full 2010-06-01 ASM9302v1 US DOE Joint Genome Institute GCA_000093025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/025/GCF_000093025.1_ASM9302v1/ na assembly from type material na haploid bacteria 3059871 3059871 42.500000 1 1 1 NCBI RefSeq GCF_000093025.1-RS_2026_03_27 2026-03-27 2845 2773 59 21622745 GCF_000093065.1 PRJNA224116 SAMN02603451 na reference genome 515618 401619 Candidatus Riesia pediculicola USDA strain=USDA na latest Complete Genome Major Full 2010-03-16 ASM9306v1 J. Craig Venter Institute GCA_000093065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/065/GCF_000093065.1_ASM9306v1/ na na na haploid bacteria 582127 582127 28.500000 2 2 2 NCBI RefSeq GCF_000093065.1-RS_2026_03_31 2026-03-31 522 474 41 na GCF_000093085.1 PRJNA224116 SAMN00000036 na reference genome 439292 85683 [Bacillus] selenitireducens MLS10 strain=MLS10 na latest Complete Genome Major Full 2010-05-28 ASM9308v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000093085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/085/GCF_000093085.1_ASM9308v1/ na assembly from type material na haploid bacteria 3592487 3592487 48.500000 1 1 1 NCBI RefSeq GCF_000093085.1-RS_2025_12_13 2025-12-13 3410 3265 95 na GCF_000093125.2 PRJNA224116 SAMN02603776 na na 653938 1639 Listeria monocytogenes 08-5578 strain=Aug-78 na latest Complete Genome Major Full 2014-06-12 ASM9312v2 Public Health Agency of Canada GCA_000093125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/125/GCF_000093125.2_ASM9312v2/ na na na haploid bacteria 3109678 3109678 38.000000 2 2 2 NCBI RefSeq GCF_000093125.2-RS_2025_02_07 2025-02-07 3168 3056 77 20167121 GCF_000093165.1 PRJNA224116 SAMN02604139 na na 600809 367488 Blattabacterium sp. (Periplaneta americana) str. BPLAN strain=BPLAN na latest Complete Genome Major Full 2010-04-01 ASM9316v1 University of Arizona-Tucson GCA_000093165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/165/GCF_000093165.1_ASM9316v1/ na na na haploid bacteria 640442 640442 28.000000 2 2 2 NCBI RefSeq GCF_000093165.1-RS_2024_08_13 2024-08-13 631 588 38 19880743 GCF_000093185.1 PRJNA224116 SAMN00003101 na na 637913 210 Helicobacter pylori v225d strain=v225d na latest Complete Genome Major Full 2010-06-03 ASM9318v1 The Pathosystems Resource Integration Center (PATRIC) GCA_000093185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/185/GCF_000093185.1_ASM9318v1/ na na na haploid bacteria 1595604 1595604 39.000000 2 2 2 NCBI RefSeq GCF_000093185.1-RS_2026_03_27 2026-03-27 1549 1418 45 20400544 GCF_000142805.1 PRJNA39575 SAMEA3138300 na reference genome 559295 381046 Lachancea thermotolerans CBS 6340 strain=CBS 6340 na latest Chromosome Major Full 2009-06-05 ASM14280v1 Génolevures Consortium GCA_000142805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/805/GCF_000142805.1_ASM14280v1/ na assembly from type material na haploid fungi 10392862 10390139 47.500000 8 8 10 Génolevures Consortium Annotation submitted by Génolevures Consortium 2025-07-15 5384 5092 292 19525356 GCF_000142965.1 PRJNA224116 SAMN02463839 ADDV00000000.1 na 563008 28135 Segatella oris C735 strain=C735 na latest Scaffold Major Full 2010-06-18 ASM14296v1 Broad Institute GCA_000142965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/965/GCF_000142965.1_ASM14296v1/ na na na haploid bacteria 3346228 3321878 44.000000 1 57 127 NCBI RefSeq GCF_000142965.1-RS_2025_12_03 2025-12-03 2883 2664 62 na GCF_000143085.1 PRJNA224116 SAMN02598531 na reference genome 105559 473531 Nitrosococcus watsonii C-113 strain=C-113 na latest Complete Genome Major Full 2010-06-25 ASM14308v1 US DOE Joint Genome Institute GCA_000143085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/085/GCF_000143085.1_ASM14308v1/ na assembly from type material na haploid bacteria 3373286 3373286 50.000000 3 3 3 NCBI RefSeq GCF_000143085.1-RS_2025_12_13 2025-12-13 3190 3071 55 na GCF_000143105.1 PRJNA264104 SAMN02953765 ACXQ00000000.2 reference genome 655863 226899 Grosmannia clavigera kw1407 strain=kw1407 na latest Scaffold Major Full 2011-01-31 Sanger-454-IlluminaPA_2.0 Michael Smith Laboratories at UBC GCA_000143105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/105/GCF_000143105.1_Sanger-454-IlluminaPA_2.0/ na na na haploid fungi 29794006 29128709 53.500000 0 289 334 Michael Smith Laboratories at UBC Annotation submitted by Michael Smith Laboratories at UBC 2023-12-29 8311 8311 0 21262841 GCF_000143145.1 PRJNA224116 SAMN02598499 na reference genome 582899 53399 Hyphomicrobium denitrificans ATCC 51888 strain=ATCC 51888 na latest Complete Genome Major Full 2010-06-25 ASM14314v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000143145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/145/GCF_000143145.1_ASM14314v1/ na assembly from type material na haploid bacteria 3638969 3638969 61.000000 1 1 1 NCBI RefSeq GCF_000143145.1-RS_2026_04_29 2026-04-29 3538 3466 53 na GCF_000143185.2 PRJNA51487 SAMN02194201 ADMJ00000000.2 reference genome 578458 5334 Schizophyllum commune H4-8 strain=H4-8 na latest Scaffold Major Full 2022-05-17 Schco3 US DOE Joint Genome Institute (JGI-PGF) GCA_000143185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/185/GCF_000143185.2_Schco3/ na na na haploid fungi 38670379 38611179 57.500000 0 25 72 US DOE Joint Genome Institute (JGI-PGF) Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) 2022-08-29 16467 16187 279 20622885 GCF_000143205.1 PRJNA224116 SAMN02603175 na na 746361 1359 Lactococcus cremoris subsp. cremoris NZ9000 strain=NZ9000 na latest Complete Genome Major Full 2010-07-02 ASM14320v1 Department of Biochemistry - University of Groningen (The Netherlands) GCA_000143205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/205/GCF_000143205.1_ASM14320v1/ na na na haploid bacteria 2530294 2530294 35.500000 1 1 1 NCBI RefSeq GCF_000143205.1-RS_2025_09_17 2025-09-17 2594 2392 86 20639323 GCF_000143225.1 PRJNA224116 SAMN02603247 na na 757424 964 Herbaspirillum seropedicae SmR1 strain=SmR1 na latest Complete Genome Major Full 2010-07-02 ASM14322v1 GENOPAR GCA_000143225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/225/GCF_000143225.1_ASM14322v1/ na na na haploid bacteria 5513887 5513887 63.500000 1 1 1 NCBI RefSeq GCF_000143225.1-RS_2026_02_06 2026-02-06 4895 4802 71 na GCF_000143365.1 PRJNA16821 SAMN02953614 AAFU00000000.1 reference genome 306901 38033 Chaetomium globosum CBS 148.51 strain=CBS 148.51 na latest Scaffold Major Full 2006-02-17 ASM14336v1 The Genome Sequencing Platform, The Genome Assembly Team GCA_000143365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/365/GCF_000143365.1_ASM14336v1/ na na na haploid fungi 34276485 33726808 56.000000 0 21 1228 The Genome Sequencing Platform, The Genome Assembly Team Annotation submitted by The Genome Sequencing Platform, The Genome Assembly Team 2021-11-15 11224 11040 182 na GCF_000143435.1 PRJNA224116 SAMN02604101 na na 712961 1624 Ligilactobacillus salivarius CECT 5713 strain=CECT 5713 na latest Complete Genome Major Full 2010-07-07 ASM14343v1 Universidad Complutense de Madrid GCA_000143435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/435/GCF_000143435.1_ASM14343v1/ na na na haploid bacteria 2136138 2136138 33.000000 4 4 4 NCBI RefSeq GCF_000143435.1-RS_2026_04_27 2026-04-27 2207 1971 101 20675488 GCF_000143535.2 PRJNA20061 SAMN02953628 na reference genome 332648 40559 Botrytis cinerea B05.10 strain=B05.10 na latest Complete Genome Major Full 2015-02-05 ASM14353v4 Syngenta Biotechnology, Inc. GCA_000143535.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/535/GCF_000143535.2_ASM14353v4/ na na na haploid fungi 42630066 42630066 42.000000 18 18 18 Syngenta Biotechnology, Inc. Annotation submitted by Syngenta Biotechnology, Inc. 2018-04-17 11698 11698 0 21876677;23104368;26913498 GCF_000143565.1 PRJNA29019 SAMN02769624 ABFE00000000.1 reference genome 486041 29883 Laccaria bicolor S238N-H82 strain=S238N-H82 na latest Scaffold Major Full 2008-01-11 V1.0 Laccaria Genome Consortium GCA_000143565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/565/GCF_000143565.1_V1.0/ na na na haploid fungi 64877444 58683330 47.000000 0 665 4401 Laccaria Genome Consortium Annotation submitted by Laccaria Genome Consortium 2023-11-13 18261 18213 0 18322534 GCF_000143585.1 PRJNA224116 SAMN02463840 ADDW00000000.1 na 563032 2047 Rothia dentocariosa M567 strain=M567 na latest Scaffold Major Full 2010-07-09 ASM14358v1 Broad Institute GCA_000143585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/585/GCF_000143585.1_ASM14358v1/ na na na haploid bacteria 2532787 2522580 54.000000 1 6 26 NCBI RefSeq GCF_000143585.1-RS_2025_07_24 2025-07-24 2206 2122 62 na GCF_000143605.1 PRJNA224116 SAMN02603256 na na 637380 1392 Bacillus cereus biovar anthracis str. CI strain=CI na latest Complete Genome Major Full 2010-07-09 ASM14360v1 Georg-August-University Goettingen GCA_000143605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/605/GCF_000143605.1_ASM14360v1/ na na na haploid bacteria 5486649 5486649 35.500000 4 4 4 NCBI RefSeq GCF_000143605.1-RS_2025_04_20 2025-04-20 5688 5260 140 20634886 GCF_000143625.1 PRJNA224116 SAMN02471564 ACYF00000000.1 na 663321 138073 Candidatus Regiella insecticola LSR1 strain=LSR1 na latest Scaffold Major Full 2010-08-19 ASM14362v1 International Aphid Genomics Consortium GCA_000143625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/625/GCF_000143625.1_ASM14362v1/ na na na haploid bacteria 2067400 2065894 42.500000 2 173 215 NCBI RefSeq GCF_000143625.1-RS_2025_12_03 2025-12-03 2329 1952 58 21966902 GCF_000143645.1 PRJNA224116 SAMN00001501 ACGO00000000.2 na 525326 2107999 Lactobacillus paragasseri JV-V03 strain=JV-V03 na latest Scaffold Major Full 2010-07-13 ASM14364v1 Baylor College of Medecine GCA_000143645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/645/GCF_000143645.1_ASM14364v1/ na na na haploid bacteria 2011855 2011295 34.500000 1 8 10 NCBI RefSeq GCF_000143645.1-RS_2026_04_17 2026-04-17 1992 1883 58 na GCF_000143685.1 PRJNA224116 SAMN02603159 na reference genome 748727 1538 Clostridium ljungdahlii DSM 13528 strain=DSM 13528 na latest Complete Genome Major Full 2010-07-12 ASM14368v1 Competence Network GCA_000143685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/685/GCF_000143685.1_ASM14368v1/ na assembly from type material na haploid bacteria 4630065 4630065 31.000000 1 1 1 NCBI RefSeq GCF_000143685.1-RS_2026_04_14 2026-04-14 4344 4187 106 20616070 GCF_000143705.2 PRJNA224116 SAMN02603078 na na 765874 1719 Corynebacterium pseudotuberculosis FRC41 strain=FRC41 na latest Complete Genome Major Full 2019-12-13 ASM14370v2 Center for Biotechnology, Bielefeld University GCA_000143705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/705/GCF_000143705.2_ASM14370v2/ na na na haploid bacteria 2337241 2337241 52.000000 1 1 1 NCBI RefSeq GCF_000143705.2-RS_2026_03_15 2026-03-15 2124 2007 63 21192786;31705053 GCF_000143725.1 PRJNA224116 SAMN02603103 na reference genome 759914 52584 Brachyspira pilosicoli 95/1000 strain=95/1000 na latest Complete Genome Major Full 2010-07-16 ASM14372v1 Centre for Comparative Genomics, Murdoch University GCA_000143725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/725/GCF_000143725.1_ASM14372v1/ na na na haploid bacteria 2586443 2586443 28.000000 1 1 1 NCBI RefSeq GCF_000143725.1-RS_2026_03_30 2026-03-30 2317 2272 40 20625514 GCF_000143745.1 PRJNA224116 SAMN00001478 ACGZ00000000.2 na 525338 1590 Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 strain=ATCC 14917 na latest Scaffold Major Full 2010-07-22 ASM14374v1 Baylor College of Medicine GCA_000143745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/745/GCF_000143745.1_ASM14374v1/ na assembly from type material na haploid bacteria 3212261 3198761 44.500000 1 9 36 NCBI RefSeq GCF_000143745.1-RS_2025_08_18 2025-08-18 3056 2952 70 na GCF_000143765.1 PRJNA224116 SAMN00001488 ACHA00000000.2 na 525373 258 Sphingobacterium spiritivorum ATCC 33861 strain=ATCC 33861 na latest Scaffold Major Full 2010-07-22 ASM14376v1 BCM GCA_000143765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/765/GCF_000143765.1_ASM14376v1/ na assembly from type material na haploid bacteria 5093512 5091512 40.000000 1 11 15 NCBI RefSeq GCF_000143765.1-RS_2026_05_16 2026-05-16 4345 4276 56 na GCF_000143785.1 PRJNA224116 SAMN00000627 ACKQ00000000.2 na 525257 250 Chryseobacterium gleum ATCC 35910 strain=ATCC 35910 na latest Scaffold Major Full 2010-07-22 ASM14378v1 Baylor College of Medicine GCA_000143785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/785/GCF_000143785.1_ASM14378v1/ na assembly from type material na haploid bacteria 5570640 5569640 37.000000 1 5 7 NCBI RefSeq GCF_000143785.1-RS_2026_05_22 2026-05-22 5155 5051 80 na GCF_000143825.1 PRJNA224116 SAMN00139184 ACLJ00000000.2 na 585529 38288 Corynebacterium genitalium ATCC 33030 strain=ATCC 33030 na latest Chromosome Major Full 2010-09-07 ASM14382v1 Baylor College of Medicine GCA_000143825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/825/GCF_000143825.1_ASM14382v1/ na assembly from type material na haploid bacteria 2349953 2349653 62.500000 1 1 3 NCBI RefSeq GCF_000143825.1-RS_2026_02_14 2026-02-14 2268 2174 59 na GCF_000143845.1 PRJNA224116 SAMN00016989 na reference genome 633147 133926 Olsenella uli DSM 7084 strain=DSM 7084 na latest Complete Genome Major Full 2010-07-26 ASM14384v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000143845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/845/GCF_000143845.1_ASM14384v1/ na assembly from type material na haploid bacteria 2051896 2051896 64.500000 1 1 1 NCBI RefSeq GCF_000143845.1-RS_2025_12_10 2025-12-10 1823 1758 55 21304694 GCF_000143865.1 PRJNA224116 SAMN02603457 na na 865867 2102 Mycoplasma mycoides subsp. mycoides SC str. Gladysdale strain=Gladysdale na latest Complete Genome Major Full 2010-07-26 ASM14386v1 JCVI GCA_000143865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/865/GCF_000143865.1_ASM14386v1/ na na na haploid bacteria 1193808 1193808 24.000000 1 1 1 NCBI RefSeq GCF_000143865.1-RS_2026_02_26 2026-02-26 1072 934 39 22843585 GCF_000143885.2 PRJNA224116 SAMN02603183 na na 337191 337191 Gordonia sp. KTR9 strain=KTR9 na latest Complete Genome Major Full 2012-09-10 ASM14388v2 Department of Microbiology & Immunology, University of British Columbia, Vancouver, British Columbia, Canada. GCA_000143885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/885/GCF_000143885.2_ASM14388v2/ na na na haploid bacteria 5885710 5885710 67.500000 4 4 4 NCBI RefSeq GCF_000143885.2-RS_2025_08_27 2025-08-27 5333 5209 58 20709853;22923396 GCF_000143965.1 PRJNA224116 SAMN02598521 na reference genome 644282 453230 Desulfarculus baarsii DSM 2075 strain=DSM 2075 na latest Complete Genome Major Full 2010-07-29 ASM14396v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000143965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/965/GCF_000143965.1_ASM14396v1/ na assembly from type material na haploid bacteria 3655731 3655731 65.500000 1 1 1 NCBI RefSeq GCF_000143965.1-RS_2025_12_16 2025-12-16 3379 3305 54 21304732 GCF_000143985.1 PRJNA224116 SAMN00017394 na reference genome 573413 55206 Sediminispirochaeta smaragdinae DSM 11293 strain=DSM 11293 na latest Complete Genome Major Full 2010-07-29 ASM14398v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000143985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/985/GCF_000143985.1_ASM14398v1/ na assembly from type material na haploid bacteria 4653970 4653970 49.000000 1 1 1 NCBI RefSeq GCF_000143985.1-RS_2025_12_09 2025-12-09 4360 4278 60 21304743 GCF_000144005.1 PRJNA224116 SAMN00189190 ADZV00000000.1 na 765105 1747 Cutibacterium acnes HL001PA1 strain=HL001PA1 na latest Scaffold Major Full 2010-07-29 ASM14400v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/005/GCF_000144005.1_ASM14400v1/ na na na haploid bacteria 2474931 2474201 60.000000 1 16 57 NCBI RefSeq GCF_000144005.1-RS_2026_06_28 2026-06-28 2411 2195 53 na GCF_000144025.1 PRJNA224116 SAMN00189191 ADXW00000000.1 na 765115 1747 Cutibacterium acnes HL002PA1 strain=HL002PA1 na latest Scaffold Major Full 2010-07-30 ASM14402v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/025/GCF_000144025.1_ASM14402v1/ na na na haploid bacteria 2477180 2476114 60.000000 1 14 59 NCBI RefSeq GCF_000144025.1-RS_2026_04_17 2026-04-17 2433 2310 52 na GCF_000144045.1 PRJNA224116 SAMN00189233 ADZT00000000.1 na 765110 1747 Cutibacterium acnes HL067PA1 strain=HL067PA1 na latest Scaffold Major Full 2010-07-30 ASM14404v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/045/GCF_000144045.1_ASM14404v1/ na na na haploid bacteria 2527934 2526632 60.000000 1 35 54 NCBI RefSeq GCF_000144045.1-RS_2026_04_25 2026-04-25 2508 2381 53 na GCF_000144065.1 PRJNA224116 SAMN00189197 ADZW00000000.1 na 765099 1747 Cutibacterium acnes HL005PA4 strain=HL005PA4 na latest Scaffold Major Full 2010-07-30 ASM14406v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/065/GCF_000144065.1_ASM14406v1/ na na na haploid bacteria 2470111 2469727 60.000000 1 16 34 NCBI RefSeq GCF_000144065.1-RS_2026_04_16 2026-04-16 2434 2317 53 na GCF_000144085.1 PRJNA224116 SAMN00189218 ADZU00000000.1 na 765109 2559073 Cutibacterium modestum HL044PA1 strain=HL044PA1 na latest Scaffold Major Full 2010-07-30 ASM14408v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/085/GCF_000144085.1_ASM14408v1/ na na na haploid bacteria 2643856 2642650 60.000000 1 27 44 NCBI RefSeq GCF_000144085.1-RS_2026_03_31 2026-03-31 2547 2256 53 na GCF_000144105.1 PRJNA224116 SAMN00189239 ADZR00000000.1 na 765121 1747 Cutibacterium acnes HL082PA2 strain=HL082PA2 na latest Scaffold Major Full 2010-07-30 ASM14410v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/105/GCF_000144105.1_ASM14410v1/ na na na haploid bacteria 2486187 2485511 60.000000 1 37 54 NCBI RefSeq GCF_000144105.1-RS_2026_05_02 2026-05-02 2426 2221 54 na GCF_000144125.1 PRJNA224116 SAMN00189192 ADZS00000000.1 na 765116 1747 Cutibacterium acnes HL002PA2 strain=HL002PA2 na latest Scaffold Major Full 2010-08-05 ASM14412v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/125/GCF_000144125.1_ASM14412v1/ na na na haploid bacteria 2475756 2475125 60.000000 1 15 35 NCBI RefSeq GCF_000144125.1-RS_2026_04_17 2026-04-17 2437 2316 53 na GCF_000144145.1 PRJNA224116 SAMN00189203 ADZO00000000.1 na 765090 1747 Cutibacterium acnes HL025PA2 strain=HL025PA2 na latest Scaffold Major Full 2010-07-30 ASM14414v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/145/GCF_000144145.1_ASM14414v1/ na na na haploid bacteria 2478457 2476597 60.000000 1 21 53 NCBI RefSeq GCF_000144145.1-RS_2026_04_19 2026-04-19 2443 2318 52 na GCF_000144165.1 PRJNA224116 SAMN00189226 ADZB00000000.1 na 765067 1747 Cutibacterium acnes HL053PA2 strain=HL053PA2 na latest Scaffold Major Full 2010-08-05 ASM14416v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/165/GCF_000144165.1_ASM14416v1/ na na na haploid bacteria 2498093 2497696 60.000000 1 17 39 NCBI RefSeq GCF_000144165.1-RS_2026_04_26 2026-04-26 2463 2314 56 na GCF_000144185.1 PRJNA224116 SAMN00189224 ADZD00000000.1 na 765066 1747 Cutibacterium acnes HL053PA1 strain=HL053PA1 na latest Scaffold Major Full 2010-08-05 ASM14418v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/185/GCF_000144185.1_ASM14418v1/ na na na haploid bacteria 2525356 2524766 60.000000 1 25 35 NCBI RefSeq GCF_000144185.1-RS_2026_04_07 2026-04-07 2509 2392 52 na GCF_000144205.1 PRJNA224116 SAMN00189247 ADZE00000000.1 na 765077 1747 Cutibacterium acnes HL110PA1 strain=HL110PA1 na latest Scaffold Major Full 2010-08-05 ASM14420v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/205/GCF_000144205.1_ASM14420v1/ na na na haploid bacteria 2496146 2495610 60.000000 1 16 31 NCBI RefSeq GCF_000144205.1-RS_2026_04_21 2026-04-21 2459 2324 52 na GCF_000144225.1 PRJNA224116 SAMN00189240 ADZC00000000.1 na 765087 1747 Cutibacterium acnes HL083PA1 strain=HL083PA1 na latest Scaffold Major Full 2010-08-04 ASM14422v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/225/GCF_000144225.1_ASM14422v1/ na na na haploid bacteria 2477505 2477046 60.000000 1 18 31 NCBI RefSeq GCF_000144225.1-RS_2026_04_17 2026-04-17 2446 2327 52 na GCF_000144245.1 PRJNA224116 SAMN00189234 ADZF00000000.1 na 765074 1747 Cutibacterium acnes HL072PA1 strain=HL072PA1 na latest Scaffold Major Full 2010-08-04 ASM14424v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/245/GCF_000144245.1_ASM14424v1/ na na na haploid bacteria 2524164 2523939 60.000000 1 22 34 NCBI RefSeq GCF_000144245.1-RS_2026_04_04 2026-04-04 2491 2380 52 na GCF_000144265.1 PRJNA224116 SAMN00189222 ADZL00000000.1 na 765100 1747 Cutibacterium acnes HL050PA1 strain=HL050PA1 na latest Scaffold Major Full 2010-08-04 ASM14426v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/265/GCF_000144265.1_ASM14426v1/ na na na haploid bacteria 2474681 2473877 60.000000 1 17 39 NCBI RefSeq GCF_000144265.1-RS_2026_04_21 2026-04-21 2443 2310 52 na GCF_000144285.1 PRJNA224116 SAMN00189220 ADZQ00000000.1 na 765094 1747 Cutibacterium acnes HL046PA1 strain=HL046PA1 na latest Scaffold Major Full 2010-08-04 ASM14428v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/285/GCF_000144285.1_ASM14428v1/ na na na haploid bacteria 2478109 2476594 60.000000 1 15 46 NCBI RefSeq GCF_000144285.1-RS_2026_04_19 2026-04-19 2443 2319 52 na GCF_000144305.1 PRJNA224116 SAMN00189194 ADZP00000000.1 na 765096 1747 Cutibacterium acnes HL005PA1 strain=HL005PA1 na latest Scaffold Major Full 2010-08-04 ASM14430v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/305/GCF_000144305.1_ASM14430v1/ na na na haploid bacteria 2517132 2515997 60.000000 1 49 80 NCBI RefSeq GCF_000144305.1-RS_2026_04_25 2026-04-25 2514 2374 53 na GCF_000144325.1 PRJNA224116 SAMN00189225 ADZK00000000.1 na 765102 1747 Cutibacterium acnes HL050PA3 strain=HL050PA3 na latest Scaffold Major Full 2010-08-04 ASM14432v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/325/GCF_000144325.1_ASM14432v1/ na na na haploid bacteria 2476614 2476239 60.000000 1 14 24 NCBI RefSeq GCF_000144325.1-RS_2026_04_04 2026-04-04 2432 2321 52 na GCF_000144345.1 PRJNA224116 SAMN00189196 ADZM00000000.1 na 765098 1747 Cutibacterium acnes HL005PA3 strain=HL005PA3 na latest Scaffold Major Full 2010-08-04 ASM14434v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/345/GCF_000144345.1_ASM14434v1/ na na na haploid bacteria 2474828 2474419 60.000000 1 17 27 NCBI RefSeq GCF_000144345.1-RS_2026_04_18 2026-04-18 2440 2318 52 na GCF_000144365.1 PRJNA224116 SAMN00189219 ADZA00000000.1 na 765068 1747 Cutibacterium acnes HL045PA1 strain=HL045PA1 na latest Scaffold Major Full 2010-08-04 ASM14436v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/365/GCF_000144365.1_ASM14436v1/ na na na haploid bacteria 2527697 2527192 60.000000 1 19 36 NCBI RefSeq GCF_000144365.1-RS_2026_04_18 2026-04-18 2505 2384 52 na GCF_000144385.1 PRJNA224116 SAMN00189195 ADZN00000000.1 na 765097 1747 Cutibacterium acnes HL005PA2 strain=HL005PA2 na latest Scaffold Major Full 2010-08-04 ASM14438v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/385/GCF_000144385.1_ASM14438v1/ na na na haploid bacteria 2473180 2472636 60.000000 1 19 35 NCBI RefSeq GCF_000144385.1-RS_2026_04_20 2026-04-20 2442 2307 53 na GCF_000144405.1 PRJNA224116 SAMN00001916 na reference genome 553174 28132 Prevotella melaninogenica ATCC 25845 strain=ATCC 25845 na latest Complete Genome Major Full 2010-08-04 ASM14440v1 J. Craig Venter Institute GCA_000144405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/405/GCF_000144405.1_ASM14440v1/ na assembly from type material na haploid bacteria 3168282 3168282 41.000000 2 2 2 NCBI RefSeq GCF_000144405.1-RS_2026_01_08 2026-01-08 2453 2349 65 na GCF_000144425.1 PRJNA224116 SAMN00189242 ADYP00000000.1 na 765093 1747 Cutibacterium acnes HL086PA1 strain=HL086PA1 na latest Scaffold Major Full 2010-08-05 ASM14442v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/425/GCF_000144425.1_ASM14442v1/ na na na haploid bacteria 2524311 2523826 60.000000 1 16 30 NCBI RefSeq GCF_000144425.1-RS_2026_04_20 2026-04-20 2483 2347 54 na GCF_000144445.1 PRJNA224116 SAMN00189214 ADYD00000000.1 na 765085 1747 Cutibacterium acnes HL038PA1 strain=HL038PA1 na latest Scaffold Major Full 2010-08-05 ASM14444v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/445/GCF_000144445.1_ASM14444v1/ na na na haploid bacteria 2535478 2533595 60.000000 1 24 65 NCBI RefSeq GCF_000144445.1-RS_2026_04_25 2026-04-25 2519 2397 51 na GCF_000144465.1 PRJNA224116 SAMN00189223 ADYC00000000.1 na 765101 1747 Cutibacterium acnes HL050PA2 strain=HL050PA2 na latest Scaffold Major Full 2010-08-05 ASM14446v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/465/GCF_000144465.1_ASM14446v1/ na na na haploid bacteria 2461373 2458793 60.000000 1 13 64 NCBI RefSeq GCF_000144465.1-RS_2026_05_01 2026-05-01 2395 2189 51 na GCF_000144485.1 PRJNA224116 SAMN00189245 ADYA00000000.1 na 765083 1747 Cutibacterium acnes HL087PA3 strain=HL087PA3 na latest Scaffold Major Full 2010-08-05 ASM14448v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/485/GCF_000144485.1_ASM14448v1/ na na na haploid bacteria 2516818 2516528 60.000000 1 20 29 NCBI RefSeq GCF_000144485.1-RS_2025_04_04 2025-04-04 2487 2372 52 na GCF_000144505.1 PRJNA224116 SAMN00189201 ADYO00000000.1 na 765065 1747 Cutibacterium acnes HL020PA1 strain=HL020PA1 na latest Scaffold Major Full 2010-08-05 ASM14450v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/505/GCF_000144505.1_ASM14450v1/ na na na haploid bacteria 2478512 2477861 60.000000 1 14 33 NCBI RefSeq GCF_000144505.1-RS_2026_02_06 2026-02-06 2439 2322 52 na GCF_000144525.1 PRJNA224116 SAMN00189200 ADYN00000000.1 na 765070 1747 Cutibacterium acnes HL013PA2 strain=HL013PA2 na latest Scaffold Major Full 2010-08-05 ASM14452v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/525/GCF_000144525.1_ASM14452v1/ na na na haploid bacteria 2475763 2475255 60.000000 1 18 38 NCBI RefSeq GCF_000144525.1-RS_2026_04_16 2026-04-16 2441 2323 52 na GCF_000144545.1 PRJNA224116 SAMN00189231 ADYK00000000.1 na 765113 1747 Cutibacterium acnes HL063PA1 strain=HL063PA1 na latest Scaffold Major Full 2010-08-05 ASM14454v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/545/GCF_000144545.1_ASM14454v1/ na na na haploid bacteria 2476710 2476463 60.000000 1 14 22 NCBI RefSeq GCF_000144545.1-RS_2026_04_17 2026-04-17 2434 2314 52 na GCF_000144565.1 PRJNA224116 SAMN00189208 ADYL00000000.1 na 765106 1747 Cutibacterium acnes HL036PA1 strain=HL036PA1 na latest Scaffold Major Full 2010-08-05 ASM14456v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/565/GCF_000144565.1_ASM14456v1/ na na na haploid bacteria 2477752 2477526 60.000000 1 13 21 NCBI RefSeq GCF_000144565.1-RS_2026_04_17 2026-04-17 2441 2321 52 na GCF_000144585.1 PRJNA224116 SAMN00189209 ADYU00000000.1 na 765107 1747 Cutibacterium acnes HL036PA2 strain=HL036PA2 na latest Scaffold Major Full 2010-08-05 ASM14458v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/585/GCF_000144585.1_ASM14458v1/ na na na haploid bacteria 2476672 2476130 60.000000 1 13 24 NCBI RefSeq GCF_000144585.1-RS_2026_04_18 2026-04-18 2436 2316 52 na GCF_000144605.1 PRJNA224116 SAMN00007485 na reference genome 633149 74313 Brevundimonas subvibrioides ATCC 15264 strain=ATCC 15264 na latest Complete Genome Major Full 2010-08-05 ASM14460v1 US DOE Joint Genome Institute GCA_000144605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/605/GCF_000144605.1_ASM14460v1/ na assembly from type material na haploid bacteria 3445263 3445263 68.500000 1 1 1 NCBI RefSeq GCF_000144605.1-RS_2026_05_01 2026-05-01 3391 3331 55 na GCF_000144625.1 PRJNA224116 SAMN00017134 na reference genome 610130 84030 [Clostridium] saccharolyticum WM1 strain=WM1 na latest Complete Genome Major Full 2010-08-05 ASM14462v1 US DOE Joint Genome Institute GCA_000144625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/625/GCF_000144625.1_ASM14462v1/ na assembly from type material na haploid bacteria 4662871 4662871 45.000000 1 1 1 NCBI RefSeq GCF_000144625.1-RS_2025_12_13 2025-12-13 4342 4200 90 na GCF_000144645.1 PRJNA224116 SAMN00713558 na reference genome 555079 291990 Thermosediminibacter oceani DSM 16646 strain=DSM 16646 na latest Complete Genome Major Full 2010-08-05 ASM14464v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000144645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/645/GCF_000144645.1_ASM14464v1/ na assembly from type material na haploid bacteria 2280035 2280035 47.000000 1 1 1 NCBI RefSeq GCF_000144645.1-RS_2026_05_01 2026-05-01 2339 2215 64 21304740 GCF_000144675.2 PRJNA224116 SAMN02604117 na na 681645 1719 Corynebacterium pseudotuberculosis C231 strain=C231 na latest Complete Genome Major Full 2020-01-16 ASM14467v2 University Federal of Minas Gerais GCA_000144675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/675/GCF_000144675.2_ASM14467v2/ na na na haploid bacteria 2337250 2337250 52.000000 1 1 1 NCBI RefSeq GCF_000144675.2-RS_2026_04_05 2026-04-05 2125 2003 63 21037006;21533164 GCF_000144695.1 PRJNA224116 SAMN00016993 na reference genome 574087 28187 Acetohalobium arabaticum DSM 5501 strain=DSM 5501 na latest Complete Genome Major Full 2010-08-05 ASM14469v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000144695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/695/GCF_000144695.1_ASM14469v1/ na assembly from type material na haploid bacteria 2469596 2469596 36.500000 1 1 1 NCBI RefSeq GCF_000144695.1-RS_2026_05_01 2026-05-01 2438 2315 86 21304692 GCF_000144715.1 PRJNA224116 SAMN00189205 ADYT00000000.1 na 765112 1747 Cutibacterium acnes HL027PA2 strain=HL027PA2 na latest Scaffold Major Full 2010-08-10 ASM14471v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/715/GCF_000144715.1_ASM14471v1/ na na na haploid bacteria 2474672 2473928 60.000000 1 16 42 NCBI RefSeq GCF_000144715.1-RS_2026_04_20 2026-04-20 2452 2320 54 na GCF_000144735.1 PRJNA224116 SAMN00189232 ADYS00000000.1 na 765114 1747 Cutibacterium acnes HL063PA2 strain=HL063PA2 na latest Scaffold Major Full 2010-08-10 ASM14473v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/735/GCF_000144735.1_ASM14473v1/ na na na haploid bacteria 2503840 2503152 60.000000 1 16 43 NCBI RefSeq GCF_000144735.1-RS_2026_04_26 2026-04-26 2467 2328 52 na GCF_000144755.1 PRJNA224116 SAMN00189216 ADYM00000000.1 na 765073 1747 Cutibacterium acnes HL043PA2 strain=HL043PA2 na latest Scaffold Major Full 2010-08-05 ASM14475v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/755/GCF_000144755.1_ASM14475v1/ na na na haploid bacteria 2532589 2532164 60.000000 1 39 53 NCBI RefSeq GCF_000144755.1-RS_2026_04_25 2026-04-25 2519 2387 52 na GCF_000144775.1 PRJNA224116 SAMN00189193 ADYR00000000.1 na 765117 1747 Cutibacterium acnes HL002PA3 strain=HL002PA3 na latest Scaffold Major Full 2010-08-10 ASM14477v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/775/GCF_000144775.1_ASM14477v1/ na na na haploid bacteria 2475439 2475236 60.000000 1 13 24 NCBI RefSeq GCF_000144775.1-RS_2025_04_04 2025-04-04 2432 2316 52 na GCF_000144795.1 PRJNA224116 SAMN00189202 ADYQ00000000.1 na 765089 1747 Cutibacterium acnes HL025PA1 strain=HL025PA1 na latest Scaffold Major Full 2010-08-10 ASM14479v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/795/GCF_000144795.1_ASM14479v1/ na na na haploid bacteria 2535134 2534561 60.000000 1 12 25 NCBI RefSeq GCF_000144795.1-RS_2026_04_26 2026-04-26 2486 2343 53 na GCF_000144815.1 PRJNA224116 SAMN00189248 ADYY00000000.1 na 765078 1747 Cutibacterium acnes HL110PA2 strain=HL110PA2 na latest Scaffold Major Full 2010-08-06 ASM14481v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/815/GCF_000144815.1_ASM14481v1/ na na na haploid bacteria 2502372 2501706 60.000000 1 14 27 NCBI RefSeq GCF_000144815.1-RS_2026_04_19 2026-04-19 2455 2327 53 na GCF_000144835.1 PRJNA224116 SAMN00189236 ADYZ00000000.1 na 765076 1747 Cutibacterium acnes HL074PA1 strain=HL074PA1 na latest Scaffold Major Full 2010-08-06 ASM14483v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/835/GCF_000144835.1_ASM14483v1/ na na na haploid bacteria 2510912 2510120 60.000000 1 58 85 NCBI RefSeq GCF_000144835.1-RS_2026_05_02 2026-05-02 2517 2364 56 na GCF_000144855.1 PRJNA224116 SAMN00189228 ADYW00000000.1 na 765091 1747 Cutibacterium acnes HL059PA1 strain=HL059PA1 na latest Scaffold Major Full 2010-08-10 ASM14485v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/855/GCF_000144855.1_ASM14485v1/ na na na haploid bacteria 2475087 2474683 60.000000 1 20 40 NCBI RefSeq GCF_000144855.1-RS_2026_04_18 2026-04-18 2438 2313 55 na GCF_000144875.1 PRJNA224116 SAMN00189221 ADYV00000000.1 na 765095 1747 Cutibacterium acnes HL046PA2 strain=HL046PA2 na latest Scaffold Major Full 2010-08-10 ASM14487v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/875/GCF_000144875.1_ASM14487v1/ na na na haploid bacteria 2509602 2508989 60.000000 1 59 80 NCBI RefSeq GCF_000144875.1-RS_2026_05_02 2026-05-02 2503 2349 56 na GCF_000144895.1 PRJNA224116 SAMN00189250 ADYF00000000.1 na 765080 1747 Cutibacterium acnes HL110PA4 strain=HL110PA4 na latest Scaffold Major Full 2010-08-10 ASM14489v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000144895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/895/GCF_000144895.1_ASM14489v1/ na na na haploid bacteria 2512699 2510783 60.000000 1 56 99 NCBI RefSeq GCF_000144895.1-RS_2026_04_15 2026-04-15 2467 2234 53 na GCF_000144915.1 PRJNA224116 SAMN02603091 na reference genome 666510 242703 Acidilobus saccharovorans 345-15 strain=345-15 na latest Complete Genome Major Full 2010-08-06 ASM14491v1 Centre Bioengineering RAS GCA_000144915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/915/GCF_000144915.1_ASM14491v1/ na assembly from type material na haploid archaea 1496453 1496453 57.000000 1 1 1 NCBI RefSeq GCF_000144915.1-RS_2026_03_30 2026-03-30 1549 1495 51 20581186 GCF_000144935.2 PRJNA224116 SAMN02603609 na na 679896 1719 Corynebacterium pseudotuberculosis 1002 strain=1002 na latest Complete Genome Major Full 2020-01-27 ASM14493v3 Minas Gerais Genome Network GCA_000144935.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/935/GCF_000144935.2_ASM14493v3/ na na na haploid bacteria 2334828 2334828 52.000000 1 1 1 NCBI RefSeq GCF_000144935.2-RS_2026_06_30 2026-06-30 2123 2011 62 21037006;21533164;31705053 GCF_000144955.2 PRJNA224116 SAMN02604217 na na 869816 1280 Staphylococcus aureus subsp. aureus JKD6159 strain=JKD6159 na latest Complete Genome Major Full 2022-08-08 ASM14495v2 University of Melbourne GCA_000144955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/955/GCF_000144955.2_ASM14495v2/ na na na haploid bacteria 2839400 2839400 33.000000 2 2 2 NCBI RefSeq GCF_000144955.2-RS_2025_09_18 2025-09-18 2810 2641 82 20729356 GCF_000144995.1 PRJNA224116 SAMN00014633 ADWM00000000.2 na 768485 487 Neisseria meningitidis K1207 strain=K1207 K1207 latest Scaffold Major Full 2013-05-30 K1207_nm2.0 university of Padua GCA_000144995.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/144/995/GCF_000144995.1_K1207_nm2.0/ na na na haploid bacteria 2140025 2082596 52.000000 1 41 138 NCBI RefSeq GCF_000144995.1-RS_2026_03_21 2026-03-21 2160 1940 60 20675487 GCF_000145015.1 PRJNA224116 SAMN00014634 ADWN00000000.2 na 768484 487 Neisseria meningitidis S0108 strain=S0108 na latest Scaffold Major Full 2013-06-04 S0108_nm2.0 university of Padua GCA_000145015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/015/GCF_000145015.1_S0108_nm2.0/ na na na haploid bacteria 2145814 2086882 52.000000 1 41 127 NCBI RefSeq GCF_000145015.1-RS_2026_03_21 2026-03-21 2139 1926 60 20675487 GCF_000145035.1 PRJNA224116 SAMN02602973 na reference genome 515622 43305 Butyrivibrio proteoclasticus B316 strain=B316 na latest Complete Genome Major Full 2010-08-10 ASM14503v1 AgResearch GCA_000145035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/035/GCF_000145035.1_ASM14503v1/ na assembly from type material na haploid bacteria 4404886 4404886 40.000000 4 4 4 NCBI RefSeq GCF_000145035.1-RS_2025_12_13 2025-12-13 3934 3839 73 20689770 GCF_000145055.1 PRJNA224116 SAMN00189249 ADYG00000000.1 na 765079 1747 Cutibacterium acnes HL110PA3 strain=HL110PA3 na latest Scaffold Major Full 2010-08-10 ASM14505v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/055/GCF_000145055.1_ASM14505v1/ na na na haploid bacteria 2493123 2490836 60.000000 1 29 89 NCBI RefSeq GCF_000145055.1-RS_2026_04_30 2026-04-30 2437 2213 52 na GCF_000145075.1 PRJNA224116 SAMN00189212 ADYH00000000.1 na 765123 2559073 Cutibacterium modestum HL037PA2 strain=HL037PA2 na latest Scaffold Major Full 2010-08-10 ASM14507v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/075/GCF_000145075.1_ASM14507v1/ na na na haploid bacteria 2614131 2613759 60.000000 1 43 57 NCBI RefSeq GCF_000145075.1-RS_2026_02_01 2026-02-01 2518 2208 52 na GCF_000145095.1 PRJNA224116 SAMN00189227 ADYI00000000.1 na 765119 1747 Cutibacterium acnes HL056PA1 strain=HL056PA1 na latest Scaffold Major Full 2010-08-10 ASM14509v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/095/GCF_000145095.1_ASM14509v1/ na na na haploid bacteria 2473652 2472999 60.000000 1 32 46 NCBI RefSeq GCF_000145095.1-RS_2026_04_25 2026-04-25 2450 2327 54 na GCF_000145115.1 PRJNA224116 SAMN00189206 ADYB00000000.1 na 765103 1747 Cutibacterium acnes HL030PA1 strain=HL030PA1 na latest Scaffold Major Full 2010-08-10 ASM14511v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/115/GCF_000145115.1_ASM14511v1/ na na na haploid bacteria 2543354 2541176 60.000000 1 18 67 NCBI RefSeq GCF_000145115.1-RS_2026_04_29 2026-04-29 2477 2332 51 na GCF_000145135.1 PRJNA224116 SAMN00189243 ADXQ00000000.1 na 765081 1747 Cutibacterium acnes HL087PA1 strain=HL087PA1 na latest Scaffold Major Full 2010-08-10 ASM14513v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/135/GCF_000145135.1_ASM14513v1/ na na na haploid bacteria 2474863 2474478 60.000000 1 13 25 NCBI RefSeq GCF_000145135.1-RS_2026_04_04 2026-04-04 2433 2322 52 na GCF_000145155.1 PRJNA224116 SAMN00189241 ADXT00000000.1 na 765088 1747 Cutibacterium acnes HL083PA2 strain=HL083PA2 na latest Scaffold Major Full 2010-08-10 ASM14515v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/155/GCF_000145155.1_ASM14515v1/ na na na haploid bacteria 2477898 2477393 60.000000 1 14 24 NCBI RefSeq GCF_000145155.1-RS_2026_04_18 2026-04-18 2436 2315 52 na GCF_000145175.1 PRJNA224116 SAMN00189198 ADYJ00000000.1 na 765118 1747 Cutibacterium acnes HL007PA1 strain=HL007PA1 na latest Scaffold Major Full 2010-08-10 ASM14517v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/175/GCF_000145175.1_ASM14517v1/ na na na haploid bacteria 2530544 2530133 60.000000 1 25 38 NCBI RefSeq GCF_000145175.1-RS_2026_04_19 2026-04-19 2509 2385 52 na GCF_000145195.1 PRJNA224116 SAMN00189215 ADXP00000000.1 na 765072 1747 Cutibacterium acnes HL043PA1 strain=HL043PA1 na latest Scaffold Major Full 2010-08-16 ASM14519v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/195/GCF_000145195.1_ASM14519v1/ na na na haploid bacteria 2533449 2533141 60.000000 1 28 34 NCBI RefSeq GCF_000145195.1-RS_2026_04_24 2026-04-24 2513 2393 52 na GCF_000145215.1 PRJNA224116 SAMN00713559 na reference genome 608506 717609 Caldicellulosiruptor obsidiansis OB47 strain=OB47 na latest Complete Genome Major Full 2010-08-11 ASM14521v1 US DOE Joint Genome Institute GCA_000145215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/215/GCF_000145215.1_ASM14521v1/ na assembly from type material na haploid bacteria 2532343 2532343 35.000000 1 1 1 NCBI RefSeq GCF_000145215.1-RS_2025_12_13 2025-12-13 2410 2266 59 20851897 GCF_000145235.1 PRJNA224116 SAMN00006196 na reference genome 644283 47850 Micromonospora aurantiaca ATCC 27029 strain=ATCC 27029 na latest Complete Genome Major Full 2010-08-11 ASM14523v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000145235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/235/GCF_000145235.1_ASM14523v1/ na assembly from type material na haploid bacteria 7025559 7025559 73.000000 1 1 1 NCBI RefSeq GCF_000145235.1-RS_2026_06_15 2026-06-15 6390 6252 64 na GCF_000145255.1 PRJNA224116 SAMN00002572 na reference genome 395494 370405 Gallionella capsiferriformans ES-2 strain=ES-2 na latest Complete Genome Major Full 2010-08-11 ASM14525v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000145255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/255/GCF_000145255.1_ASM14525v1/ na assembly from type material na haploid bacteria 3162471 3162471 53.000000 1 1 1 NCBI RefSeq GCF_000145255.1-RS_2025_11_23 2025-11-23 2976 2895 63 na GCF_000145275.1 PRJNA224116 SAMN00002614 na reference genome 573061 1493 Clostridium cellulovorans 743B strain=743B na latest Complete Genome Major Full 2010-08-11 ASM14527v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000145275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/275/GCF_000145275.1_ASM14527v1/ na assembly from type material na haploid bacteria 5262222 5262222 31.000000 1 1 1 NCBI RefSeq GCF_000145275.1-RS_2026_04_14 2026-04-14 4516 4350 111 na GCF_000145295.1 PRJNA224116 SAMN02603260 na reference genome 79929 145263 Methanothermobacter marburgensis str. Marburg strain=Marburg na latest Complete Genome Major Full 2010-08-11 ASM14529v1 Georg-August-University Goettingen GCA_000145295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/295/GCF_000145295.1_ASM14529v1/ na assembly from type material na haploid archaea 1639135 1639135 48.500000 2 2 2 NCBI RefSeq GCF_000145295.1-RS_2025_12_02 2025-12-02 1788 1723 49 20802048 GCF_000145315.2 PRJNA224116 SAMN02463836 ADDR00000000.2 na 457398 457398 Desulfovibrio sp. 3_1_syn3 strain=3_1_syn3 na latest Contig Major Full 2013-08-28 Desulfovibrio_sp3_1_syn3_V2 Broad Institute GCA_000145315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/315/GCF_000145315.2_Desulfovibrio_sp3_1_syn3_V2/ na na na haploid bacteria 3663932 3663932 61.000000 0 3 3 NCBI RefSeq GCF_000145315.2-RS_2025_08_25 2025-08-25 3202 3109 68 na GCF_000145335.1 PRJNA224116 SAMN00189235 ADXR00000000.1 na 765075 1747 Cutibacterium acnes HL072PA2 strain=HL072PA2 na latest Scaffold Major Full 2010-08-16 ASM14533v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/335/GCF_000145335.1_ASM14533v1/ na na na haploid bacteria 2523950 2522151 60.000000 1 31 76 NCBI RefSeq GCF_000145335.1-RS_2026_04_18 2026-04-18 2505 2383 53 na GCF_000145355.1 PRJNA224116 SAMN00189230 ADYE00000000.1 na 765084 1747 Cutibacterium acnes HL060PA1 strain=HL060PA1 na latest Scaffold Major Full 2010-08-16 ASM14535v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/355/GCF_000145355.1_ASM14535v1/ na na na haploid bacteria 2476294 2475384 60.000000 1 14 47 NCBI RefSeq GCF_000145355.1-RS_2026_05_01 2026-05-01 2399 2199 53 na GCF_000145375.1 PRJNA224116 SAMN00189238 ADZJ00000000.1 na 765120 1747 Cutibacterium acnes HL082PA1 strain=HL082PA1 na latest Scaffold Major Full 2010-08-16 ASM14537v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/375/GCF_000145375.1_ASM14537v1/ na na na haploid bacteria 2501602 2501273 60.000000 1 17 28 NCBI RefSeq GCF_000145375.1-RS_2026_04_21 2026-04-21 2460 2321 55 na GCF_000145415.1 PRJNA224116 SAMN00189213 ADXV00000000.1 na 765124 2559073 Cutibacterium modestum HL037PA3 strain=HL037PA3 na latest Scaffold Major Full 2010-08-16 ASM14541v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/415/GCF_000145415.1_ASM14541v1/ na na na haploid bacteria 2621672 2619651 60.000000 1 24 69 NCBI RefSeq GCF_000145415.1-RS_2026_03_31 2026-03-31 2519 2221 53 na GCF_000145435.1 PRJNA224116 SAMN00189246 ADXU00000000.1 na 765086 1747 Cutibacterium acnes HL092PA1 strain=HL092PA1 na latest Scaffold Major Full 2010-08-16 ASM14543v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/435/GCF_000145435.1_ASM14543v1/ na na na haploid bacteria 2502117 2501898 60.000000 1 14 21 NCBI RefSeq GCF_000145435.1-RS_2026_04_19 2026-04-19 2455 2329 53 na GCF_000145455.1 PRJNA224116 SAMN00189204 ADXX00000000.1 na 765111 1747 Cutibacterium acnes HL027PA1 strain=HL027PA1 na latest Scaffold Major Full 2010-08-16 ASM14545v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/455/GCF_000145455.1_ASM14545v1/ na na na haploid bacteria 2521598 2519967 60.000000 1 55 100 NCBI RefSeq GCF_000145455.1-RS_2026_04_25 2026-04-25 2508 2370 52 na GCF_000145475.1 PRJNA224116 SAMN00189229 ADXS00000000.1 na 765092 1747 Cutibacterium acnes HL059PA2 strain=HL059PA2 na latest Scaffold Major Full 2010-08-16 ASM14547v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/475/GCF_000145475.1_ASM14547v1/ na na na haploid bacteria 2476878 2476584 60.000000 1 13 23 NCBI RefSeq GCF_000145475.1-RS_2026_04_07 2026-04-07 2431 2315 52 na GCF_000145495.1 PRJNA224116 SAMN00189210 ADXY00000000.1 na 765108 1747 Cutibacterium acnes HL036PA3 strain=HL036PA3 na latest Scaffold Major Full 2010-08-16 ASM14549v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/495/GCF_000145495.1_ASM14549v1/ na na na haploid bacteria 2479798 2477900 60.000000 1 13 72 NCBI RefSeq GCF_000145495.1-RS_2026_04_19 2026-04-19 2447 2321 53 na GCF_000145515.1 PRJNA224116 SAMN00189207 ADXZ00000000.1 na 765104 1747 Cutibacterium acnes HL030PA2 strain=HL030PA2 na latest Scaffold Major Full 2010-08-16 ASM14551v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/515/GCF_000145515.1_ASM14551v1/ na na na haploid bacteria 2505472 2503604 60.000000 1 22 68 NCBI RefSeq GCF_000145515.1-RS_2026_04_21 2026-04-21 2470 2333 55 na GCF_000145535.1 PRJNA224116 SAMN00189237 ADZG00000000.1 na 765071 1747 Cutibacterium acnes HL078PA1 strain=HL078PA1 na latest Scaffold Major Full 2010-08-16 ASM14553v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/535/GCF_000145535.1_ASM14553v1/ na na na haploid bacteria 2566964 2566233 60.000000 1 44 84 NCBI RefSeq GCF_000145535.1-RS_2026_05_02 2026-05-02 2563 2403 52 na GCF_000145555.1 PRJNA224116 SAMN00189211 ADZI00000000.1 na 765122 1747 Cutibacterium acnes HL037PA1 strain=HL037PA1 na latest Scaffold Major Full 2010-08-16 ASM14555v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/555/GCF_000145555.1_ASM14555v1/ na na na haploid bacteria 2476421 2476029 60.000000 1 16 34 NCBI RefSeq GCF_000145555.1-RS_2026_04_18 2026-04-18 2442 2322 53 na GCF_000145575.1 PRJNA224116 SAMN00189199 ADZH00000000.1 na 765069 1747 Cutibacterium acnes HL013PA1 strain=HL013PA1 na latest Scaffold Major Full 2010-08-16 ASM14557v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000145575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/575/GCF_000145575.1_ASM14557v1/ na na na haploid bacteria 2478076 2477780 60.000000 1 12 26 NCBI RefSeq GCF_000145575.1-RS_2026_04_18 2026-04-18 2439 2317 52 na GCF_000145595.1 PRJNA224116 SAMN02603619 na na 546342 1280 Staphylococcus aureus subsp. aureus str. JKD6008 strain=JKD6008 na latest Complete Genome Major Full 2010-08-13 ASM14559v1 Monash University GCA_000145595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/595/GCF_000145595.1_ASM14559v1/ na na na haploid bacteria 2924344 2924344 33.000000 1 1 1 NCBI RefSeq GCF_000145595.1-RS_2025_04_26 2025-04-26 2969 2767 101 20802046 GCF_000145615.1 PRJNA224116 SAMN00002542 na reference genome 580327 1517 Thermoanaerobacterium thermosaccharolyticum DSM 571 strain=DSM 571 na latest Complete Genome Major Full 2010-08-13 ASM14561v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000145615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/615/GCF_000145615.1_ASM14561v1/ na assembly from type material na haploid bacteria 2785752 2785752 34.000000 1 1 1 NCBI RefSeq GCF_000145615.1-RS_2026_04_07 2026-04-07 2823 2694 77 na GCF_000145635.1 PRJNA225513 SAMN02981249 ADBI00000000.1 reference genome 644352 36779 Gaeumannomyces tritici R3-111a-1 strain=R3-111a-1 na latest Scaffold Major Full 2010-08-25 Gae_graminis_V2 Broad Institute GCA_000145635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/635/GCF_000145635.1_Gae_graminis_V2/ na na na haploid fungi 43618147 40880106 57.000000 0 513 1808 Broad Institute Annotation submitted by Broad Institute 2017-07-12 14749 14458 211 na GCF_000145685.1 PRJNA224116 SAMN02471319 AEAD00000000.1 na 629258 47877 Pseudomonas amygdali pv. aesculi str. 0893_23 strain=0893_23 na latest Scaffold Major Full 2010-08-23 ASM14568v1 University of North Carolina at Chapel Hill GCA_000145685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/685/GCF_000145685.1_ASM14568v1/ na na na haploid bacteria 6005667 5960467 58.500000 1 463 915 NCBI RefSeq GCF_000145685.1-RS_2026_04_17 2026-04-17 5752 5282 43 21799664 GCF_000145705.1 PRJNA224116 SAMN02603209 na na 872331 2100 Mesomycoplasma hyorhinis HUB-1 strain=HUB-1 na latest Complete Genome Major Full 2010-08-20 ASM14570v1 Division of Animal Infectious Diseases, State Key Laboratory of Agricultural Microbiology Huazhong Agricultural University GCA_000145705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/705/GCF_000145705.1_ASM14570v1/ na na na haploid bacteria 839615 839615 26.000000 1 1 1 NCBI RefSeq GCF_000145705.1-RS_2026_03_26 2026-03-26 748 684 36 20802032 GCF_000145745.1 PRJNA224116 SAMN02471318 AEAE00000000.1 na 629259 47877 Pseudomonas amygdali pv. morsprunorum str. M302280 strain=M302280 na latest Scaffold Major Full 2010-08-23 ASM14574v1 University of North Carolina at Chapel Hill GCA_000145745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/745/GCF_000145745.1_ASM14574v1/ na na na haploid bacteria 6091697 6039297 58.500000 1 445 969 NCBI RefSeq GCF_000145745.1-RS_2025_05_22 2025-05-22 5833 5446 44 21799664 GCF_000145825.2 PRJNA224116 SAMN02471314 na na 629264 317 Pseudomonas syringae Cit 7 strain=Cit 7 na latest Complete Genome Major Full 2021-05-03 ASM14582v2 University of North Carolina at Chapel Hill GCA_000145825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/825/GCF_000145825.2_ASM14582v2/ na na na haploid bacteria 5874519 5874519 59.500000 1 1 1 NCBI RefSeq GCF_000145825.2-RS_2025_05_17 2025-05-17 5163 4971 84 21799664 GCF_000145845.2 PRJNA224116 SAMN02471321 na na 629265 251701 Pseudomonas syringae pv. maculicola str. ES4326 strain=ES4326 na latest Complete Genome Major Full 2020-01-13 ASM14584v2 University of North Carolina at Chapel Hill GCA_000145845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/845/GCF_000145845.2_ASM14584v2/ na na na haploid bacteria 6593626 6593626 58.500000 5 5 5 NCBI RefSeq GCF_000145845.2-RS_2025_05_21 2025-05-21 6003 5684 86 21799664 GCF_000145865.1 PRJNA224116 SAMN02471320 AEAL00000000.1 na 629266 317 Pseudomonas syringae pv. actinidiae str. M302091 strain=M302091 na latest Scaffold Major Full 2010-08-25 ASM14586v1 University of North Carolina at Chapel Hill GCA_000145865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/865/GCF_000145865.1_ASM14586v1/ na na na haploid bacteria 5901732 5849032 59.000000 1 414 941 NCBI RefSeq GCF_000145865.1-RS_2026_05_01 2026-05-01 5718 5274 46 21799664 GCF_000145905.2 PRJNA224116 SAMN02471325 AEAN00000000.2 na 629268 317 Pseudomonas syringae pv. aptata str. DSM 50252 strain=DSM 50252 na latest Contig Major Full 2023-08-14 ASM14590v2 University of North Carolina at Chapel Hill GCA_000145905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/905/GCF_000145905.2_ASM14590v2/ na na na haploid bacteria 5918862 5918862 59.000000 1 3 3 NCBI RefSeq GCF_000145905.2-RS_2026_03_30 2026-03-30 5207 5007 83 21799664 GCF_000145925.1 PRJNA224116 SAMN02471316 AEAO00000000.1 na 629270 317 Pseudomonas syringae pv. aceris str. M302273 strain=M302273 na latest Scaffold Major Full 2010-08-25 ASM14592v1 University of North Carolina at Chapel Hill GCA_000145925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/925/GCF_000145925.1_ASM14592v1/ na na na haploid bacteria 6250569 6183769 59.000000 1 511 1179 NCBI RefSeq GCF_000145925.1-RS_2025_05_17 2025-05-17 6153 5658 47 21799664 GCF_000145945.2 PRJNA224116 SAMN02471315 na reference genome 573066 47877 Pseudomonas amygdali pv. tabaci str. ATCC 11528 strain=ATCC 11528 na latest Complete Genome Major Full 2019-08-15 ASM14594v2 University of North Carolina at Chapel Hill GCA_000145945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/145/945/GCF_000145945.2_ASM14594v2/ na na na haploid bacteria 6201720 6201720 58.000000 2 2 2 NCBI RefSeq GCF_000145945.2-RS_2025_12_11 2025-12-11 5560 5323 85 na GCF_000146005.2 PRJNA224116 SAMN02471323 na na 629260 47877 Pseudomonas amygdali pv. lachrymans str. M301315 strain=M301315 na latest Complete Genome Major Full 2018-07-31 ASM14600v2 University of North Carolina at Chapel Hill GCA_000146005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/005/GCF_000146005.2_ASM14600v2/ na na na haploid bacteria 7149865 7149865 57.500000 4 4 4 NCBI RefSeq GCF_000146005.2-RS_2026_04_18 2026-04-18 6828 6496 140 21799664 GCF_000146025.2 PRJNA224116 SAMD00232923 na na 1408204 1408204 Candidatus Endomicrobiellum trichonymphae strain=Rs-D17 genomovar Ri2008 na latest Complete Genome Major Full 2008-03-18 ASM14602v1 RIKEN Genomic Sciences Center (GSC) GCA_000146025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/025/GCF_000146025.2_ASM14602v1/ na na na haploid bacteria 1148570 1148570 35.000000 4 4 4 NCBI RefSeq GCF_000146025.2-RS_2025_08_11 2025-08-11 1214 1129 50 18391199 GCF_000146045.2 PRJNA128 na na reference genome 559292 4932 Saccharomyces cerevisiae S288C strain=S288C na latest Complete Genome Major Full 2014-12-17 R64 Saccharomyces Genome Database GCA_000146045.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/045/GCF_000146045.2_R64/ na na na haploid fungi 12071326 12071326 38.500000 16 16 16 SGD SGD R64-5-1 2026-01-23 6477 6021 438 1574125;7670463;7731988;7813418;8091229;8196765;8641269;8849441;9169867;9169868;9169869;9169870;9169871;9169872;9169873;9169874;9169875;9872396;34897464 GCF_000146065.2 PRJNA224116 SAMEA2272155 na reference genome 459349 456827 Candidatus Cloacimonas acidaminovorans str. Evry strain=Evry na latest Complete Genome Major Full 2008-02-12 ASM14606v1 Genoscope GCA_000146065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/065/GCF_000146065.2_ASM14606v1/ na na na haploid bacteria 2246820 2246820 38.000000 1 1 1 NCBI RefSeq GCF_000146065.2-RS_2025_12_13 2025-12-13 1795 1734 55 18245282 GCF_000146165.2 PRJNA224116 SAMN02604014 na reference genome 211586 70863 Shewanella oneidensis MR-1 strain=MR-1 na latest Complete Genome Major Full 2012-11-02 ASM14616v2 TIGR GCA_000146165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/165/GCF_000146165.2_ASM14616v2/ na assembly from type material na haploid bacteria 5131424 5131424 46.000000 2 2 2 NCBI RefSeq GCF_000146165.2-RS_2026_03_30 2026-03-30 4629 4343 138 12368813;16038018;18378659;21810203 GCF_000146185.1 PRJNA224116 SAMN02603083 na reference genome 515620 39485 Lachnospira eligens ATCC 27750 strain=ATCC 27750 na latest Complete Genome Major Full 2009-06-04 ASM14618v1 Center for Genome Sciences, Washington University School of Medicine GCA_000146185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/185/GCF_000146185.1_ASM14618v1/ na assembly from type material na haploid bacteria 2831389 2831389 37.500000 3 3 3 NCBI RefSeq GCF_000146185.1-RS_2025_12_13 2025-12-13 2746 2644 66 19321416 GCF_000146265.3 PRJNA224116 SAMN02604243 na na 668336 714 Aggregatibacter actinomycetemcomitans D11S-1 strain=D11S-1 na latest Complete Genome Major Full 2016-06-27 ASM14626v4 Bumgarner Laboratory Department of Microbiology University of Washington GCA_000146265.4 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/265/GCF_000146265.3_ASM14626v4/ na na na haploid bacteria 2160722 2160722 44.500000 3 3 3 NCBI RefSeq GCF_000146265.3-RS_2026_01_15 2026-01-15 2161 1972 79 19820097;26420795 GCF_000146285.1 PRJNA224116 SAMN00117214 AEEE00000000.1 na 585198 2051 Mobiluncus curtisii subsp. curtisii ATCC 35241 strain=ATCC 35241 na latest Scaffold Major Full 2010-08-27 ASM14628v1 Baylor College of Medicine GCA_000146285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/285/GCF_000146285.1_ASM14628v1/ na assembly from type material na haploid bacteria 2152970 2136873 55.500000 1 8 21 NCBI RefSeq GCF_000146285.1-RS_2026_05_16 2026-05-16 1875 1805 52 na GCF_000146325.1 PRJNA224116 SAMN00116807 AEEG00000000.1 na 862514 1254 Pediococcus acidilactici DSM 20284 strain=DSM 20284 na latest Scaffold Major Full 2010-08-27 ASM14632v1 Baylor College of Medicine GCA_000146325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/325/GCF_000146325.1_ASM14632v1/ na assembly designated as neotype na haploid bacteria 1942827 1929627 42.000000 1 4 11 NCBI RefSeq GCF_000146325.1-RS_2026_02_15 2026-02-15 1877 1800 60 na GCF_000146345.1 PRJNA224116 SAMN00117215 AEEH00000000.1 reference genome 862517 507750 Peptoniphilus duerdenii ATCC BAA-1640 strain=ATCC BAA-1640 na latest Scaffold Major Full 2010-08-27 ASM14634v1 Baylor College of Medicine GCA_000146345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/345/GCF_000146345.1_ASM14634v1/ na assembly from type material na haploid bacteria 2124844 2081526 34.000000 1 16 61 NCBI RefSeq GCF_000146345.1-RS_2026_05_01 2026-05-01 1959 1893 31 na GCF_000146365.1 PRJNA224116 SAMN02299442 AEEJ00000000.1 na 864563 712535 Selenomonas sp. oral taxon 149 str. 67H29BP strain=67H29BP na latest Scaffold Major Full 2010-08-27 ASM14636v1 Baylor College of Medicine GCA_000146365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/365/GCF_000146365.1_ASM14636v1/ na na na haploid bacteria 2471116 2429414 57.000000 1 16 56 NCBI RefSeq GCF_000146365.1-RS_2024_08_22 2024-08-22 2403 2302 70 na GCF_000146385.1 PRJNA224116 SAMN00117207 AEEK00000000.1 na 862516 1280 Staphylococcus aureus subsp. aureus ATCC BAA-39 strain=ATCC BAA-39 na latest Scaffold Major Full 2010-08-27 ASM14638v1 Baylor College of Medicine GCA_000146385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/385/GCF_000146385.1_ASM14638v1/ na na na haploid bacteria 2934515 2865318 32.500000 1 25 83 NCBI RefSeq GCF_000146385.1-RS_2025_08_06 2025-08-06 2901 2738 59 na GCF_000146405.1 PRJNA224116 SAMN00117534 AEEL00000000.1 na 864569 1335 Streptococcus equinus ATCC 700338 strain=ATCC 700338 na latest Scaffold Major Full 2010-08-31 ASM14640v1 Baylor College of Medicine GCA_000146405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/405/GCF_000146405.1_ASM14640v1/ na na na haploid bacteria 2083084 2050893 37.000000 1 10 38 NCBI RefSeq GCF_000146405.1-RS_2025_03_10 2025-03-10 2072 1951 36 na GCF_000146465.1 PRJNA51607 SAMN03081424 na reference genome 876142 58839 Encephalitozoon intestinalis ATCC 50506 strain=ATCC 50506 na latest Chromosome Major Full 2010-08-16 ASM14646v1 Keeling lab, University of British Columbia GCA_000146465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/465/GCF_000146465.1_ASM14646v1/ na na na haploid fungi 2216898 2216798 41.500000 11 11 12 Keeling lab, University of British Columbia Annotation submitted by Keeling lab, University of British Columbia 2022-04-18 2010 1938 72 20865802;22802648 GCF_000146485.1 PRJNA224116 SAMN00139429 AEED00000000.1 na 862512 38284 Corynebacterium accolens ATCC 49726 strain=ATCC 49726 na latest Scaffold Major Full 2010-09-01 ASM14648v1 Baylor College of Medicine GCA_000146485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/485/GCF_000146485.1_ASM14648v1/ na na na haploid bacteria 2465636 2368466 59.500000 1 35 165 NCBI RefSeq GCF_000146485.1-RS_2025_07_24 2025-07-24 2338 2182 57 na GCF_000146505.1 PRJNA224116 SAMN02603971 na reference genome 59374 833 Fibrobacter succinogenes subsp. succinogenes S85 strain=S85 na latest Complete Genome Major Full 2010-08-06 ASM14650v1 TIGR GCA_000146505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/505/GCF_000146505.1_ASM14650v1/ na assembly from type material na haploid bacteria 3843004 3843004 48.000000 1 1 1 NCBI RefSeq GCF_000146505.1-RS_2026_03_30 2026-03-30 3185 3102 70 na GCF_000146525.1 PRJNA224116 SAMN00000310 AEEM00000000.1 na 545774 315405 Streptococcus gallolyticus subsp. gallolyticus TX20005 strain=TX20005 na latest Scaffold Major Full 2010-09-01 ASM14652v1 Baylor College of Medicine GCA_000146525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/525/GCF_000146525.1_ASM14652v1/ na na na haploid bacteria 2246969 2214091 37.500000 1 6 25 NCBI RefSeq GCF_000146525.1-RS_2025_07_24 2025-07-24 2199 2135 37 na GCF_000146565.1 PRJNA224116 SAMN02602993 na na 655816 96241 Bacillus spizizenii str. W23 strain=W23 na latest Complete Genome Major Full 2010-08-31 ASM14656v1 Bacillus Genetic Stock Center GCA_000146565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/565/GCF_000146565.1_ASM14656v1/ na na na haploid bacteria 4027676 4027676 44.000000 1 1 1 NCBI RefSeq GCF_000146565.1-RS_2025_09_16 2025-09-16 4139 3896 106 21527469 GCF_000146585.1 PRJNA224116 SAMN00116813 AEEN00000000.1 na 864567 28037 Streptococcus mitis ATCC 6249 strain=ATCC 6249 na latest Scaffold Major Full 2010-09-01 ASM14658v1 Baylor College of Medicine GCA_000146585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/585/GCF_000146585.1_ASM14658v1/ na na na haploid bacteria 1915891 1897427 41.000000 1 8 19 NCBI RefSeq GCF_000146585.1-RS_2025_03_16 2025-03-16 1806 1741 37 na GCF_000146655.1 PRJNA224116 SAMN00117532 AEEF00000000.1 na 862513 487 Neisseria meningitidis ATCC 13091 strain=ATCC 13091 na latest Scaffold Major Full 2010-09-01 ASM14665v1 Baylor College of Medicine GCA_000146655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/655/GCF_000146655.1_ASM14665v1/ na na na haploid bacteria 2262611 2158793 52.000000 1 27 145 NCBI RefSeq GCF_000146655.1-RS_2025_07_24 2025-07-24 2252 2019 60 na GCF_000146675.1 PRJNA224116 SAMN00117235 AEEI00000000.1 reference genome 862515 189722 Hoylesella marshii DSM 16973 = JCM 13450 strain=DSM 16973 na latest Scaffold Major Full 2010-09-03 ASM14667v1 Baylor College of Medicine GCA_000146675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/675/GCF_000146675.1_ASM14667v1/ na assembly from type material na haploid bacteria 2559358 2517013 47.500000 1 11 79 NCBI RefSeq GCF_000146675.1-RS_2026_04_07 2026-04-07 2135 2022 52 na GCF_000146735.1 PRJNA224116 SAMN02471201 AEFE00000000.1 na 879462 562 Escherichia coli str. K-12 substr. MG1655star strain=K-12 substr. MG1655star na latest Chromosome Major Full 2010-09-03 ASM14673v1 OU Botany & Microbiology GCA_000146735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/735/GCF_000146735.1_ASM14673v1/ na na na haploid bacteria 4639637 4607632 51.000000 1 1 52 NCBI RefSeq GCF_000146735.1-RS_2025_06_09 2025-06-09 4541 4193 110 21422176 GCF_000146755.1 PRJNA224116 SAMN00260141 AEEP00000000.1 na 864570 712630 Streptococcus sp. oral taxon 071 str. 73H25AP strain=73H25AP na latest Scaffold Major Full 2010-09-03 ASM14675v1 Baylor College of Medicine GCA_000146755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/755/GCF_000146755.1_ASM14675v1/ na na na haploid bacteria 1976523 1960470 41.000000 1 7 20 NCBI RefSeq GCF_000146755.1-RS_2024_08_12 2024-08-12 1929 1850 48 na GCF_000146775.1 PRJNA224116 SAMN00210789 AEEQ00000000.1 na 871562 1689 Bifidobacterium dentium ATCC 27679 strain=ATCC 27679 na latest Scaffold Major Full 2010-09-03 ASM14677v1 Baylor College of Medicine GCA_000146775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/775/GCF_000146775.1_ASM14677v1/ na na na haploid bacteria 2645781 2633776 58.500000 1 10 24 NCBI RefSeq GCF_000146775.1-RS_2026_03_30 2026-03-30 2255 2172 65 na GCF_000146835.1 PRJNA224116 SAMN00215925 AEER00000000.1 na 864566 195 Campylobacter coli JV20 strain=JV20 na latest Scaffold Major Full 2010-09-03 ASM14683v1 Baylor College of Medicine GCA_000146835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/835/GCF_000146835.1_ASM14683v1/ na na na haploid bacteria 1705064 1678593 31.500000 1 11 34 NCBI RefSeq GCF_000146835.1-RS_2025_07_30 2025-07-30 1759 1652 46 na GCF_000146875.3 PRJNA224116 SAMN02603484 na na 349520 1406 Paenibacillus polymyxa E681 strain=E681 na latest Complete Genome Minor Full 2015-03-18 ASM14687v2 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000146875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/875/GCF_000146875.3_ASM14687v2/ na na na haploid bacteria 5394883 5394883 46.000000 1 1 1 NCBI RefSeq GCF_000146875.3-RS_2025_04_26 2025-04-26 4911 4652 131 20851896;24939175 GCF_000146895.1 PRJNA224116 SAMN00216800 AEET00000000.1 na 871571 2052 Mobiluncus mulieris ATCC 35239 strain=ATCC 35239 na latest Scaffold Major Full 2010-09-07 ASM14689v1 Baylor College of Medicine GCA_000146895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/895/GCF_000146895.1_ASM14689v1/ na na na haploid bacteria 2533633 2464091 55.000000 1 24 65 NCBI RefSeq GCF_000146895.1-RS_2026_04_26 2026-04-26 2239 2143 51 na GCF_000146915.1 PRJNA21049 SAMN02953619 AAGI00000000.1 reference genome 321614 13684 Parastagonospora nodorum SN15 strain=SN15 na latest Scaffold Major Full 2007-11-20 ASM14691v2 Broad Institute GCA_000146915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/915/GCF_000146915.1_ASM14691v2/ na na na haploid fungi 37164226 36999838 50.500000 0 107 493 Broad Institute Annotation submitted by Broad Institute 2023-04-03 16114 15990 96 18024570 GCF_000146945.2 PRJNA20263 SAMN02953621 AAGT00000000.1 reference genome 665079 5180 Sclerotinia sclerotiorum 1980 UF-70 strain=1980 na latest Scaffold Minor Full 2015-07-16 ASM14694v2 Broad Institute GCA_000146945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/945/GCF_000146945.2_ASM14694v2/ na na na haploid fungi 38330312 38001451 42.000000 0 36 679 Broad Institute Annotation submitted by Broad Institute 2023-04-03 14714 14490 220 na GCF_000147055.1 PRJNA224116 SAMN02603422 na na 198628 204038 Dickeya dadantii 3937 strain=3937 na latest Complete Genome Major Full 2010-09-10 ASM14705v1 International Erwinia Consortium GCA_000147055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/055/GCF_000147055.1_ASM14705v1/ na na na haploid bacteria 4922802 4922802 56.500000 1 1 1 NCBI RefSeq GCF_000147055.1-RS_2026_02_06 2026-02-06 4440 4250 108 21217001 GCF_000147075.1 PRJNA224116 SAMN02603259 na na 665571 154 Winmispira thermophila DSM 6192 strain=DSM 6192 na latest Complete Genome Major Full 2010-09-10 ASM14707v1 Georg-August-University Goettingen GCA_000147075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/075/GCF_000147075.1_ASM14707v1/ na na na haploid bacteria 2472645 2472645 62.000000 1 1 1 NCBI RefSeq GCF_000147075.1-RS_2025_03_23 2025-03-23 2303 2229 55 20935097 GCF_000147095.1 PRJNA224116 SAMN02604004 na na 189423 1313 Streptococcus pneumoniae 670-6B strain=670-6B na latest Complete Genome Major Full 2010-09-09 ASM14709v1 TIGR GCA_000147095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/095/GCF_000147095.1_ASM14709v1/ na na na haploid bacteria 2240045 2240045 39.500000 1 1 1 NCBI RefSeq GCF_000147095.1-RS_2026_02_04 2026-02-04 2351 2098 74 na GCF_000147145.1 PRJNA224116 SAMN00189244 ADYX00000000.1 na 765082 1747 Cutibacterium acnes HL087PA2 strain=HL087PA2 na latest Scaffold Major Full 2010-08-06 ASM14714v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/145/GCF_000147145.1_ASM14714v1/ na na na haploid bacteria 2474445 2474125 60.000000 1 16 23 NCBI RefSeq GCF_000147145.1-RS_2026_04_04 2026-04-04 2436 2324 52 na GCF_000147215.1 PRJNA224116 SAMN00189108 AEBD00000000.1 na 749501 1351 Enterococcus faecalis TX0102 strain=TX0102 na latest Scaffold Major Full 2010-09-24 ASM14721v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/215/GCF_000147215.1_ASM14721v1/ na na na haploid bacteria 2871527 2870939 37.500000 1 40 83 NCBI RefSeq GCF_000147215.1-RS_2025_07_24 2025-07-24 2774 2665 53 na GCF_000147235.1 PRJNA224116 SAMN00189137 AEBC00000000.1 na 749523 1352 Enterococcus faecium TX0133a04 strain=TX0133a04 na latest Scaffold Major Full 2010-09-24 ASM14723v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/235/GCF_000147235.1_ASM14723v1/ na na na haploid bacteria 2922651 2922141 37.500000 1 190 211 NCBI RefSeq GCF_000147235.1-RS_2025_07_24 2025-07-24 2960 2813 58 na GCF_000147255.1 PRJNA224116 SAMN00189115 AEBE00000000.1 na 749508 1351 Enterococcus faecalis TX0630 strain=TX0630 na latest Scaffold Major Full 2010-09-23 ASM14725v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/255/GCF_000147255.1_ASM14725v1/ na na na haploid bacteria 3228333 3227735 37.000000 1 141 177 NCBI RefSeq GCF_000147255.1-RS_2025_07_24 2025-07-24 3321 3154 59 na GCF_000147275.1 PRJNA224116 SAMN00189106 AEBF00000000.1 na 749499 1351 Enterococcus faecalis TX0031 strain=TX0031 na latest Scaffold Major Full 2010-09-23 ASM14727v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/275/GCF_000147275.1_ASM14727v1/ na na na haploid bacteria 2820397 2819732 37.500000 1 32 60 NCBI RefSeq GCF_000147275.1-RS_2025_07_24 2025-07-24 2718 2627 55 na GCF_000147295.1 PRJNA224116 SAMN00189131 AEBH00000000.1 na 749494 1351 Enterococcus faecalis TX4244 strain=TX4244 na latest Scaffold Major Full 2010-09-24 ASM14729v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/295/GCF_000147295.1_ASM14729v1/ na na na haploid bacteria 2925363 2924834 37.500000 1 53 76 NCBI RefSeq GCF_000147295.1-RS_2025_07_24 2025-07-24 2861 2763 54 na GCF_000147315.1 PRJNA224116 SAMN00189143 AEBG00000000.1 na 749525 1352 Enterococcus faecium TX0133C strain=TX0133C na latest Scaffold Major Full 2010-09-24 ASM14731v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/315/GCF_000147315.1_ASM14731v1/ na na na haploid bacteria 2907861 2907366 37.500000 1 193 215 NCBI RefSeq GCF_000147315.1-RS_2025_07_24 2025-07-24 2949 2800 59 na GCF_000147335.1 PRJNA224116 SAMN00000663 na reference genome 497965 2546359 Gloeothece verrucosa PCC 7822 strain=PCC 7822 na latest Complete Genome Major Full 2010-09-15 ASM14733v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000147335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/335/GCF_000147335.1_ASM14733v1/ na assembly from type material na haploid bacteria 7841948 7841948 40.000000 7 7 7 NCBI RefSeq GCF_000147335.1-RS_2026_05_01 2026-05-01 7036 6868 62 na GCF_000147355.1 PRJNA224116 SAMN00713560 na reference genome 563040 202747 Sulfurimonas autotrophica DSM 16294 strain=DSM 16294 na latest Complete Genome Major Full 2010-09-15 ASM14735v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000147355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/355/GCF_000147355.1_ASM14735v1/ na assembly from type material na haploid bacteria 2153198 2153198 35.000000 1 1 1 NCBI RefSeq GCF_000147355.1-RS_2026_05_01 2026-05-01 2237 2171 58 21304749 GCF_000147455.1 PRJNA224116 SAMN00189126 AEBI00000000.1 na 749516 1351 Enterococcus faecalis TX1346 strain=TX1346 na latest Scaffold Major Full 2010-09-23 ASM14745v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/455/GCF_000147455.1_ASM14745v1/ na na na haploid bacteria 2782905 2782364 37.500000 1 91 115 NCBI RefSeq GCF_000147455.1-RS_2025_07_24 2025-07-24 2752 2604 52 na GCF_000147475.1 PRJNA224116 SAMN00189125 AEBJ00000000.1 na 749515 1351 Enterococcus faecalis TX1342 strain=TX1342 na latest Scaffold Major Full 2010-09-24 ASM14747v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/475/GCF_000147475.1_ASM14747v1/ na na na haploid bacteria 2836540 2836049 37.500000 1 27 45 NCBI RefSeq GCF_000147475.1-RS_2025_07_24 2025-07-24 2729 2646 55 na GCF_000147495.1 PRJNA224116 SAMN00189123 AEBK00000000.1 na 749513 1351 Enterococcus faecalis TX1302 strain=TX1302 na latest Scaffold Major Full 2010-09-24 ASM14749v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/495/GCF_000147495.1_ASM14749v1/ na na na haploid bacteria 2883765 2882857 37.500000 1 32 66 NCBI RefSeq GCF_000147495.1-RS_2025_07_24 2025-07-24 2803 2710 56 na GCF_000147515.1 PRJNA224116 SAMN00189107 AEBL00000000.1 na 749500 1351 Enterococcus faecalis TX0043 strain=TX0043 na latest Scaffold Major Full 2010-09-23 ASM14751v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/515/GCF_000147515.1_ASM14751v1/ na na na haploid bacteria 2812052 2811727 37.500000 1 35 53 NCBI RefSeq GCF_000147515.1-RS_2025_07_24 2025-07-24 2767 2648 53 na GCF_000147535.1 PRJNA224116 SAMN00189105 AEBM00000000.1 na 749498 1351 Enterococcus faecalis TX0027 strain=TX0027 na latest Scaffold Major Full 2010-09-24 ASM14753v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/535/GCF_000147535.1_ASM14753v1/ na na na haploid bacteria 3061659 3061225 37.000000 1 59 92 NCBI RefSeq GCF_000147535.1-RS_2025_07_24 2025-07-24 3042 2923 56 na GCF_000147555.1 PRJNA224116 SAMN00189110 AEBN00000000.1 na 749503 1351 Enterococcus faecalis TX0309A strain=TX0309A na latest Scaffold Major Full 2010-09-24 ASM14755v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/555/GCF_000147555.1_ASM14755v1/ na na na haploid bacteria 3112207 3111309 37.000000 1 56 94 NCBI RefSeq GCF_000147555.1-RS_2025_07_24 2025-07-24 3115 2995 52 na GCF_000147575.1 PRJNA224116 SAMN00189111 AEBO00000000.1 na 749504 1351 Enterococcus faecalis TX0309B strain=TX0309B na latest Scaffold Major Full 2010-09-24 ASM14757v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/575/GCF_000147575.1_ASM14757v1/ na na na haploid bacteria 3107966 3107389 37.000000 1 69 94 NCBI RefSeq GCF_000147575.1-RS_2025_07_24 2025-07-24 3121 2992 60 na GCF_000147595.1 PRJNA224116 SAMN00189128 AEBQ00000000.1 na 749491 1351 Enterococcus faecalis TX2137 strain=TX2137 na latest Scaffold Major Full 2010-09-24 ASM14759v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/595/GCF_000147595.1_ASM14759v1/ na na na haploid bacteria 2966876 2966385 37.000000 1 106 133 NCBI RefSeq GCF_000147595.1-RS_2025_07_24 2025-07-24 2920 2787 56 na GCF_000147675.1 PRJNA224116 SAMN00008344 ADGQ00000000.1 reference genome 596315 341694 Peptostreptococcus stomatis DSM 17678 strain=DSM 17678 na latest Contig Major Full 2010-09-09 ASM14767v1 J. Craig Venter Institute GCA_000147675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/675/GCF_000147675.1_ASM14767v1/ na assembly from type material na haploid bacteria 1988044 1988044 36.500000 0 74 74 NCBI RefSeq GCF_000147675.1-RS_2025_12_13 2025-12-13 1881 1793 61 na GCF_000147695.2 PRJNA224116 SAMN00016423 na reference genome 697303 46354 Thermoanaerobacter wiegelii Rt8.B1 strain=Rt8.B1 na latest Complete Genome Major Full 2011-08-23 ASM14769v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147695.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/695/GCF_000147695.2_ASM14769v3/ na assembly from type material na haploid bacteria 2785056 2785056 34.500000 1 1 1 NCBI RefSeq GCF_000147695.2-RS_2026_04_23 2026-04-23 2810 2544 74 na GCF_000147715.2 PRJNA224116 SAMN00025417 na reference genome 660470 1184387 Mesotoga prima MesG1.Ag.4.2 strain=mesG1.Ag.4.2 na latest Complete Genome Major Full 2012-05-17 ASM14771v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/715/GCF_000147715.2_ASM14771v3/ na assembly from type material na haploid bacteria 2975953 2975953 45.500000 2 2 2 NCBI RefSeq GCF_000147715.2-RS_2025_12_10 2025-12-10 2699 2612 55 22798451 GCF_000147735.2 PRJNA224116 SAMN00016994 na na 693974 62322 Shewanella baltica BA175 strain=BA175 na latest Complete Genome Major Full 2011-05-24 ASM14773v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/735/GCF_000147735.2_ASM14773v3/ na na na haploid bacteria 5199401 5199401 46.000000 3 3 3 NCBI RefSeq GCF_000147735.2-RS_2025_12_04 2025-12-04 4519 4319 143 22328742 GCF_000147755.1 PRJNA224116 SAMN00017225 AEDF00000000.1 na 566546 562 Escherichia coli W strain=W na latest Scaffold Major Full 2010-09-13 ASM14775v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000147755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/755/GCF_000147755.1_ASM14775v1/ na na na haploid bacteria 4941083 4940834 51.000000 0 88 92 NCBI RefSeq GCF_000147755.1-RS_2025_06_13 2025-06-13 4891 4694 78 na GCF_000147775.2 PRJNA224116 SAMN00017103 na na 698936 382 Sinorhizobium meliloti BL225C strain=BL225C na latest Complete Genome Major Full 2011-05-24 ASM14777v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/775/GCF_000147775.2_ASM14777v3/ na na na haploid bacteria 6978785 6978785 62.000000 3 3 3 NCBI RefSeq GCF_000147775.2-RS_2026_03_15 2026-03-15 6680 6319 68 23431003 GCF_000147795.2 PRJNA224116 SAMN00017059 na na 693982 382 Sinorhizobium meliloti AK83 strain=AK83 na latest Complete Genome Major Full 2011-05-26 ASM14779v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147795.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/795/GCF_000147795.2_ASM14779v3/ na na na haploid bacteria 7140471 7140471 62.000000 5 5 5 NCBI RefSeq GCF_000147795.2-RS_2026_03_15 2026-03-15 6998 6542 69 23431003 GCF_000147815.2 PRJNA224116 SAMN00016986 na na 653045 68280 Streptomyces violaceusniger Tu 4113 strain=Tu 4113 na latest Complete Genome Major Full 2011-08-23 ASM14781v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147815.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/815/GCF_000147815.2_ASM14781v3/ na na na haploid bacteria 11138313 11138313 71.000000 3 3 3 NCBI RefSeq GCF_000147815.2-RS_2025_07_08 2025-07-08 9598 9135 87 na GCF_000147835.2 PRJNA224116 SAMN00016829 na na 690566 46429 Sphingobium chlorophenolicum L-1 strain=L-1 na latest Complete Genome Major Full 2011-05-26 ASM14783v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000147835.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/835/GCF_000147835.2_ASM14783v3/ na na na haploid bacteria 4573221 4573221 64.000000 3 3 3 NCBI RefSeq GCF_000147835.2-RS_2025_08_02 2025-08-02 4270 4135 70 na GCF_000147875.1 PRJNA224116 SAMN00017400 na reference genome 679926 54120 Methanolacinia petrolearia DSM 11571 strain=DSM 11571 na latest Complete Genome Major Full 2010-09-17 ASM14787v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000147875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/875/GCF_000147875.1_ASM14787v1/ na assembly from type material na haploid archaea 2843290 2843290 47.500000 1 1 1 NCBI RefSeq GCF_000147875.1-RS_2025_11_20 2025-11-20 2864 2796 57 21304750 GCF_000147905.1 PRJNA224116 SAMN00189104 AEBP00000000.1 na 749497 1351 Enterococcus faecalis TX0017 strain=TX0017 na latest Scaffold Major Full 2010-09-24 ASM14790v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/905/GCF_000147905.1_ASM14790v1/ na na na haploid bacteria 2997067 2996543 37.500000 1 69 98 NCBI RefSeq GCF_000147905.1-RS_2025_07_24 2025-07-24 2997 2856 57 na GCF_000147925.1 PRJNA224116 SAMN00189132 AEBR00000000.1 na 749495 1351 Enterococcus faecalis TX4248 strain=TX4248 na latest Scaffold Major Full 2010-09-23 ASM14792v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/925/GCF_000147925.1_ASM14792v1/ na na na haploid bacteria 3187019 3186526 37.000000 1 85 112 NCBI RefSeq GCF_000147925.1-RS_2025_07_24 2025-07-24 3180 3051 50 na GCF_000147985.1 PRJNA224116 SAMN00189100 AEBS00000000.1 na 749490 1351 Enterococcus faecalis DAPTO 516 strain=DAPTO 516 na latest Scaffold Major Full 2010-09-24 ASM14798v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000147985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/147/985/GCF_000147985.1_ASM14798v1/ na na na haploid bacteria 3055797 3055309 37.500000 1 79 97 NCBI RefSeq GCF_000147985.1-RS_2025_07_24 2025-07-24 3032 2904 56 na GCF_000148005.1 PRJNA224116 SAMN00189099 AEBT00000000.1 na 749489 1351 Enterococcus faecalis DAPTO 512 strain=DAPTO 512 na latest Scaffold Major Full 2010-09-24 ASM14800v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/005/GCF_000148005.1_ASM14800v1/ na na na haploid bacteria 3054417 3054036 37.500000 1 74 87 NCBI RefSeq GCF_000148005.1-RS_2025_07_24 2025-07-24 3026 2897 56 na GCF_000148025.1 PRJNA224116 SAMN00189133 AEBU00000000.1 na 749520 1352 Enterococcus faecium TX0082 strain=TX0082 na latest Scaffold Major Full 2010-09-24 ASM14802v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/025/GCF_000148025.1_ASM14802v1/ na na na haploid bacteria 2691854 2691069 38.000000 1 130 151 NCBI RefSeq GCF_000148025.1-RS_2025_07_31 2025-07-31 2693 2571 59 na GCF_000148045.1 PRJNA224116 SAMN00189119 AEBV00000000.1 na 749511 1351 Enterococcus faecalis TX0855 strain=TX0855 na latest Scaffold Major Full 2010-09-24 ASM14804v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/045/GCF_000148045.1_ASM14804v1/ na na na haploid bacteria 2987324 2985907 37.000000 1 65 93 NCBI RefSeq GCF_000148045.1-RS_2025_07_24 2025-07-24 2926 2795 55 na GCF_000148065.1 PRJNA224116 SAMN00189127 AEBW00000000.1 na 749518 1351 Enterococcus faecalis TX2134 strain=TX2134 na latest Scaffold Major Full 2010-09-24 ASM14806v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/065/GCF_000148065.1_ASM14806v1/ na na na haploid bacteria 3121432 3120725 37.000000 1 78 98 NCBI RefSeq GCF_000148065.1-RS_2025_07_24 2025-07-24 3123 2986 58 na GCF_000148085.1 PRJNA224116 SAMN00189122 AEBX00000000.1 na 749512 1351 Enterococcus faecalis TX0860 strain=TX0860 na latest Scaffold Major Full 2010-09-24 ASM14808v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/085/GCF_000148085.1_ASM14808v1/ na na na haploid bacteria 3061766 3061549 37.000000 1 72 88 NCBI RefSeq GCF_000148085.1-RS_2025_07_24 2025-07-24 3020 2901 55 na GCF_000148105.1 PRJNA224116 SAMN00189109 AEBY00000000.1 na 749502 1351 Enterococcus faecalis TX0109 strain=TX0109 na latest Scaffold Major Full 2010-09-24 ASM14810v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/105/GCF_000148105.1_ASM14810v1/ na na na haploid bacteria 2967295 2966807 37.500000 1 78 101 NCBI RefSeq GCF_000148105.1-RS_2025_07_24 2025-07-24 2925 2805 50 na GCF_000148125.1 PRJNA224116 SAMN00189116 AEBZ00000000.1 na 749509 1351 Enterococcus faecalis EnGen0311 strain=TX0635 na latest Scaffold Major Full 2010-09-24 ASM14812v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/125/GCF_000148125.1_ASM14812v1/ na na na haploid bacteria 3168692 3168420 37.000000 1 86 97 NCBI RefSeq GCF_000148125.1-RS_2025_07_24 2025-07-24 3170 3032 56 na GCF_000148145.1 PRJNA224116 SAMN00189138 AECI00000000.1 na 749524 1352 Enterococcus faecium TX0133B strain=TX0133B na latest Scaffold Major Full 2010-09-24 ASM14814v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/145/GCF_000148145.1_ASM14814v1/ na na na haploid bacteria 2927587 2926972 37.500000 1 199 221 NCBI RefSeq GCF_000148145.1-RS_2025_07_24 2025-07-24 2961 2829 48 na GCF_000148165.1 PRJNA224116 SAMN00189129 AECG00000000.1 na 749492 1351 Enterococcus faecalis TX2141 strain=TX2141 na latest Scaffold Major Full 2010-09-24 ASM14816v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/165/GCF_000148165.1_ASM14816v1/ na na na haploid bacteria 2903110 2902565 37.500000 1 77 108 NCBI RefSeq GCF_000148165.1-RS_2025_07_24 2025-07-24 2913 2769 55 na GCF_000148185.1 PRJNA224116 SAMN00189113 AECA00000000.1 na 749506 1351 Enterococcus faecalis TX0411 strain=TX0411 na latest Scaffold Major Full 2010-09-24 ASM14818v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/185/GCF_000148185.1_ASM14818v1/ na na na haploid bacteria 3124594 3123856 37.000000 1 75 113 NCBI RefSeq GCF_000148185.1-RS_2025_07_24 2025-07-24 3157 2992 60 na GCF_000148205.1 PRJNA224116 SAMN00189118 AECE00000000.1 na 749510 1351 Enterococcus faecalis TX0645 strain=TX0645 na latest Scaffold Major Full 2010-09-24 ASM14820v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/205/GCF_000148205.1_ASM14820v1/ na na na haploid bacteria 3174609 3173956 37.000000 1 90 123 NCBI RefSeq GCF_000148205.1-RS_2025_07_24 2025-07-24 3204 3043 58 na GCF_000148225.1 PRJNA224116 SAMN00189124 AECF00000000.1 na 749514 1351 Enterococcus faecalis TX1341 strain=TX1341 na latest Scaffold Major Full 2010-09-24 ASM14822v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/225/GCF_000148225.1_ASM14822v1/ na na na haploid bacteria 2999992 2999344 37.000000 1 38 64 NCBI RefSeq GCF_000148225.1-RS_2025_07_24 2025-07-24 2954 2853 57 na GCF_000148245.1 PRJNA224116 SAMN00189103 AECD00000000.1 na 749496 1351 Enterococcus faecalis TX0012 strain=TX0012 na latest Scaffold Major Full 2010-09-24 ASM14824v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/245/GCF_000148245.1_ASM14824v1/ na na na haploid bacteria 2818531 2818067 37.500000 1 36 57 NCBI RefSeq GCF_000148245.1-RS_2025_07_24 2025-07-24 2707 2621 53 na GCF_000148265.1 PRJNA224116 SAMN00189114 AECC00000000.1 na 749507 1351 Enterococcus faecalis TX0470 strain=TX0470 na latest Scaffold Major Full 2010-09-24 ASM14826v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/265/GCF_000148265.1_ASM14826v1/ na na na haploid bacteria 2878794 2877196 37.500000 1 42 86 NCBI RefSeq GCF_000148265.1-RS_2025_07_24 2025-07-24 2826 2725 43 na GCF_000148285.1 PRJNA224116 SAMN00189134 AECH00000000.1 na 749521 1352 Enterococcus faecium TX0133A strain=TX0133A na latest Scaffold Major Full 2010-09-24 ASM14828v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/285/GCF_000148285.1_ASM14828v1/ na na na haploid bacteria 2930324 2929657 37.500000 1 201 223 NCBI RefSeq GCF_000148285.1-RS_2025_07_24 2025-07-24 2969 2826 56 na GCF_000148305.1 PRJNA224116 SAMN00189112 AECB00000000.1 na 749505 1351 Enterococcus faecalis TX0312 strain=TX0312 na latest Scaffold Major Full 2010-09-24 ASM14830v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/305/GCF_000148305.1_ASM14830v1/ na na na haploid bacteria 2785655 2785426 37.500000 1 42 61 NCBI RefSeq GCF_000148305.1-RS_2025_07_24 2025-07-24 2722 2604 53 na GCF_000148325.1 PRJNA224116 SAMN00189136 AECJ00000000.1 na 749522 1352 Enterococcus faecium TX0133a01 strain=TX0133a01 na latest Scaffold Major Full 2010-10-04 ASM14832v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/325/GCF_000148325.1_ASM14832v1/ na na na haploid bacteria 3073581 3073166 37.500000 1 230 252 NCBI RefSeq GCF_000148325.1-RS_2025_07_24 2025-07-24 3115 2940 57 na GCF_000148365.1 PRJNA224116 SAMN02603258 na na 655817 562 Escherichia coli ABU 83972 strain=ABU 83972 na latest Complete Genome Major Full 2010-09-22 ASM14836v1 Georg-August-University Goettingen GCA_000148365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/365/GCF_000148365.1_ASM14836v1/ na na na haploid bacteria 5132961 5132961 50.500000 2 2 2 NCBI RefSeq GCF_000148365.1-RS_2025_05_23 2025-05-23 4976 4626 116 20865122 GCF_000148385.1 PRJNA224116 SAMN00017002 na reference genome 572478 164451 Vulcanisaeta distributa DSM 14429 strain=DSM 14429 na latest Complete Genome Major Full 2010-09-22 ASM14838v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000148385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/385/GCF_000148385.1_ASM14838v1/ na assembly from type material na haploid archaea 2374137 2374137 45.500000 1 1 1 NCBI RefSeq GCF_000148385.1-RS_2026_05_01 2026-05-01 2567 2494 50 21304741 GCF_000148445.1 PRJNA224116 SAMN00189130 AEBB00000000.1 na 749493 1351 Enterococcus faecalis TX4000 strain=TX4000 na latest Scaffold Major Full 2010-10-04 ASM14844v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000148445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/445/GCF_000148445.1_ASM14844v1/ na na na haploid bacteria 2840305 2839834 37.500000 1 55 77 NCBI RefSeq GCF_000148445.1-RS_2025_07_24 2025-07-24 2777 2643 55 na GCF_000148485.1 PRJNA224116 SAMN00100748 AEGV00000000.1 na 866770 2052 Mobiluncus mulieris FB024-16 strain=FB024-16 na latest Contig Major Full 2010-09-24 ASM14848v1 J. Craig Venter Institute GCA_000148485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/485/GCF_000148485.1_ASM14848v1/ na na na haploid bacteria 2384880 2384880 55.000000 0 46 46 NCBI RefSeq GCF_000148485.1-RS_2026_05_19 2026-05-19 2146 2031 52 na GCF_000148505.1 PRJNA224116 SAMN00001433 AEDT00000000.1 na 585202 28037 Streptococcus mitis SK321 strain=SK321 na latest Contig Major Full 2010-09-24 ASM14850v1 University of Maryland Institute for Genome Sciences GCA_000148505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/505/GCF_000148505.1_ASM14850v1/ na na na haploid bacteria 1873702 1873702 40.000000 0 40 40 NCBI RefSeq GCF_000148505.1-RS_2026_03_16 2026-03-16 1845 1755 25 na GCF_000148525.1 PRJNA224116 SAMN00001434 AEDU00000000.1 na 585203 28037 Streptococcus mitis SK564 strain=SK564 na latest Contig Major Full 2010-09-24 ASM14852v1 University of Maryland Institute for Genome Sciences GCA_000148525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/525/GCF_000148525.1_ASM14852v1/ na na na haploid bacteria 2026898 2026898 39.500000 0 35 35 NCBI RefSeq GCF_000148525.1-RS_2026_03_16 2026-03-16 2018 1918 35 na GCF_000148545.1 PRJNA224116 SAMN00001435 AEDV00000000.1 na 585204 28037 Streptococcus mitis SK597 strain=SK597 na latest Contig Major Full 2010-09-24 ASM14854v1 University of Maryland Institute for Genome Sciences GCA_000148545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/545/GCF_000148545.1_ASM14854v1/ na na na haploid bacteria 2029198 2029198 39.500000 0 108 108 NCBI RefSeq GCF_000148545.1-RS_2026_03_16 2026-03-16 2017 1891 30 na GCF_000148565.1 PRJNA224116 SAMN02435816 AEDW00000000.1 na 655813 1303 Streptococcus oralis ATCC 35037 strain=ATCC 35037 na latest Contig Major Full 2010-09-24 ASM14856v1 University of Maryland GCA_000148565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/565/GCF_000148565.1_ASM14856v1/ na assembly from type material na haploid bacteria 1884712 1884712 41.500000 0 25 25 NCBI RefSeq GCF_000148565.1-RS_2026_03_16 2026-03-16 1848 1714 36 na GCF_000148585.2 PRJNA224116 SAMN02435817 na na 246201 28037 Streptococcus mitis NCTC 12261 strain=NCTC 12261 na latest Complete Genome Major Full 2019-04-11 ASM14858v3 TIGR GCA_000148585.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/585/GCF_000148585.2_ASM14858v3/ na assembly designated as neotype na haploid bacteria 1868883 1868883 40.500000 1 1 1 NCBI RefSeq GCF_000148585.2-RS_2026_04_20 2026-04-20 1798 1665 75 31481387 GCF_000148605.1 PRJNA224116 SAMN00017915 na na 869729 562 Escherichia coli UM146 strain=UM146 na latest Complete Genome Major Full 2010-09-24 ASM14860v1 MBRI GCA_000148605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/605/GCF_000148605.1_ASM14860v1/ na na na haploid bacteria 5107563 5107563 50.500000 2 2 2 NCBI RefSeq GCF_000148605.1-RS_2025_06_09 2025-06-09 4974 4566 111 21075930 GCF_000148625.1 PRJNA224116 SAMN02603257 na na 637387 2115 Mycoplasmopsis fermentans JER strain=JER na latest Complete Genome Major Full 2010-09-24 ASM14862v1 Georg-August-University Goettingen GCA_000148625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/625/GCF_000148625.1_ASM14862v1/ na na na haploid bacteria 977524 977524 27.000000 1 1 1 NCBI RefSeq GCF_000148625.1-RS_2026_02_26 2026-02-26 897 835 43 21109561 GCF_000148645.1 PRJNA224116 SAMN00115627 na reference genome 550540 44012 Ferrimonas balearica DSM 9799 strain=DSM 9799 na latest Complete Genome Major Full 2010-09-24 ASM14864v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000148645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/645/GCF_000148645.1_ASM14864v1/ na assembly from type material na haploid bacteria 4279159 4279159 60.000000 1 1 1 NCBI RefSeq GCF_000148645.1-RS_2026_05_01 2026-05-01 3942 3777 149 21304747 GCF_000148705.1 PRJNA224116 SAMN02603174 na na 645464 197 Campylobacter jejuni subsp. jejuni M1 strain=M1 na latest Complete Genome Major Full 2010-09-28 ASM14870v1 Danish Technical University GCA_000148705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/705/GCF_000148705.1_ASM14870v1/ na na na haploid bacteria 1616648 1616648 30.500000 1 1 1 NCBI RefSeq GCF_000148705.1-RS_2025_05_23 2025-05-23 1669 1532 56 20865039 GCF_000148725.1 PRJNA224116 SAMN02436310 AEFL00000000.1 na 744980 744980 Roseibium sp. TrichSKD4 strain=TrichSKD4 na latest Scaffold Major Full 2010-09-28 ASM14872v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000148725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/725/GCF_000148725.1_ASM14872v1/ na na na haploid bacteria 5696886 5666313 54.000000 1 28 108 NCBI RefSeq GCF_000148725.1-RS_2024_08_22 2024-08-22 5630 5352 77 na GCF_000148745.1 PRJNA224116 SAMN02471834 AEEX00000000.1 na 798130 287 Pseudomonas aeruginosa 39016 strain=39016 na latest Chromosome Major Full 2010-09-30 ASM14874v1 Centre for Genomics Research, University of Liverpool GCA_000148745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/745/GCF_000148745.1_ASM14874v1/ na na na haploid bacteria 6866064 6667333 66.000000 1 1 349 NCBI RefSeq GCF_000148745.1-RS_2025_04_15 2025-04-15 6555 6300 67 21227987 GCF_000148815.2 PRJNA224116 SAMN02603896 na na 889932 1590 Lactiplantibacillus plantarum ST-III strain=ST-III na latest Complete Genome Major Full 2011-07-29 ASM14881v1 Technology Center of Bright Dairy & Food Co., Ltd GCA_000148815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/815/GCF_000148815.2_ASM14881v1/ na na na haploid bacteria 3307936 3307936 44.500000 2 2 2 NCBI RefSeq GCF_000148815.2-RS_2025_08_18 2025-08-18 3133 3008 89 21037001;22209721 GCF_000148855.1 PRJNA224116 SAMN02603202 na na 765962 210 Helicobacter pylori SJM180 strain=SJM180 na latest Complete Genome Major Full 2010-10-01 ASM14885v1 Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis GCA_000148855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/855/GCF_000148855.1_ASM14885v1/ na na na haploid bacteria 1658051 1658051 39.000000 1 1 1 NCBI RefSeq GCF_000148855.1-RS_2026_01_10 2026-01-10 1585 1462 45 na GCF_000148875.1 PRJNA224116 SAMN02603203 na na 765963 210 Helicobacter pylori PeCan4 strain=PeCan4 na latest Complete Genome Major Full 2010-10-01 ASM14887v1 Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis GCA_000148875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/875/GCF_000148875.1_ASM14887v1/ na na na haploid bacteria 1638269 1638269 39.000000 2 2 2 NCBI RefSeq GCF_000148875.1-RS_2026_01_10 2026-01-10 1582 1457 45 na GCF_000148895.1 PRJNA224116 SAMN02603204 na na 765964 210 Helicobacter pylori Cuz20 strain=Cuz20 na latest Complete Genome Major Full 2010-10-01 ASM14889v1 Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis GCA_000148895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/895/GCF_000148895.1_ASM14889v1/ na na na haploid bacteria 1635449 1635449 39.000000 1 1 1 NCBI RefSeq GCF_000148895.1-RS_2026_01_10 2026-01-10 1592 1473 46 na GCF_000148915.1 PRJNA224116 SAMN02603200 na na 794851 210 Helicobacter pylori Sat464 strain=Sat464 na latest Complete Genome Major Full 2010-10-01 ASM14891v1 Dept. Molec. Microbiology, Washintgton University Medical School in Saint Louis GCA_000148915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/915/GCF_000148915.1_ASM14891v1/ na na na haploid bacteria 1567570 1567570 39.000000 2 2 2 NCBI RefSeq GCF_000148915.1-RS_2026_01_10 2026-01-10 1517 1411 45 na GCF_000148935.1 PRJNA224116 SAMN02603237 na na 712898 470934 Pantoea vagans C9-1 strain=C9-1 na latest Complete Genome Major Full 2010-10-01 ASM14893v1 Forschungsanstalt Agroscope Changins-Wädenswil ACW GCA_000148935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/935/GCF_000148935.1_ASM14893v1/ na na na haploid bacteria 4888338 4888338 55.000000 4 4 4 NCBI RefSeq GCF_000148935.1-RS_2026_03_27 2026-03-27 4605 4379 112 20487014;20952567 GCF_000148995.1 PRJNA224116 SAMN00001446 ACCR00000000.2 na 525367 1641 Listeria grayi DSM 20601 strain=DSM 20601 na latest Scaffold Major Full 2010-11-05 ASM14899v1 Baylor College of Medicine GCA_000148995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/148/995/GCF_000148995.1_ASM14899v1/ na assembly from type material na haploid bacteria 2598321 2589961 41.500000 2 4 6 NCBI RefSeq GCF_000148995.1-RS_2026_04_04 2026-04-04 2636 2541 67 na GCF_000149015.1 PRJNA224116 SAMN00001489 ACHH00000000.2 na 548475 1280 Staphylococcus aureus subsp. aureus TCH70 strain=TCH70 na latest Scaffold Major Full 2010-11-05 ASM14901v1 Baylor College of Medicine GCA_000149015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/015/GCF_000149015.1_ASM14901v1/ na na na haploid bacteria 2818925 2812425 32.500000 2 5 18 NCBI RefSeq GCF_000149015.1-RS_2025_06_02 2025-06-02 2812 2673 63 na GCF_000149035.1 PRJNA225514 SAMN02953757 ACOD00000000.1 reference genome 645133 31870 Colletotrichum graminicola M1.001 strain=M1.001 na latest Scaffold Major Full 2010-10-12 C_graminicola_M1_001_V1 Broad Institute GCA_000149035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/035/GCF_000149035.1_C_graminicola_M1_001_V1/ na assembly from type material na haploid fungi 51604658 50866947 49.000000 0 653 1151 Broad Institute Annotation submitted by Broad Institute 2022-02-25 12399 12019 379 na GCF_000149165.1 PRJNA224116 SAMN00115044 AEHJ00000000.1 na 553191 1689 Bifidobacterium dentium JCVIHMP022 strain=JCVIHMP022 na latest Scaffold Major Full 2010-10-08 ASM14916v1 J. Craig Venter Institute GCA_000149165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/165/GCF_000149165.1_ASM14916v1/ na na na haploid bacteria 2636584 2636505 58.500000 0 35 39 NCBI RefSeq GCF_000149165.1-RS_2025_07_06 2025-07-06 2283 2121 63 na GCF_000149245.1 PRJNA177334 SAMN03081441 na reference genome 235443 5207 Cryptococcus neoformans H99 strain=H99 na latest Chromosome Major Full 2014-02-07 CNA3 Broad Institute GCA_000149245.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/245/GCF_000149245.1_CNA3/ na na na haploid fungi 18891193 18891093 48.000000 14 14 15 Broad Institute Annotation submitted by Broad Institute 2018-04-04 8338 6975 1359 24743168 GCF_000149305.1 PRJNA1151041 SAMN02953598 AACW00000000.2 reference genome 246409 936053 Rhizopus delemar RA 99-880 strain=RA 99-880 na latest Scaffold Major Full 2009-05-27 RO3 Broad Institute GCA_000149305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/305/GCF_000149305.1_RO3/ na na na haploid fungi 46087117 45262477 35.500000 0 81 389 Broad Institute Annotation submitted by Broad Institute 2024-09-04 17703 17459 243 19578406 GCF_000149335.2 PRJNA16822 SAMN02953601 AAEC00000000.3 reference genome 246410 5501 Coccidioides immitis RS strain=RS na latest Scaffold Major Full 2009-10-29 ASM14933v2 Broad Institute GCA_000149335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/335/GCF_000149335.2_ASM14933v2/ na na na haploid fungi 28947925 28947525 46.000000 0 6 10 Broad Institute Annotation submitted by Broad Institute 2022-05-02 9905 9757 144 20516208 GCF_000149385.1 PRJNA19119 SAMN02953604 AAEY00000000.1 na 283643 40410 Cryptococcus deneoformans B-3501A strain=B-3501A na latest Chromosome Major Full 2004-07-16 ASM14938v1 Stanford University GCA_000149385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/385/GCF_000149385.1_ASM14938v1/ na na na haploid fungi 19699782 18519482 48.500000 14 14 70 Stanford University Annotation submitted by Stanford University 2023-09-13 6609 6500 109 15653466 GCF_000149425.1 PRJNA19593 SAMN02953607 AAFM00000000.1 reference genome 294746 4929 Meyerozyma guilliermondii ATCC 6260 strain=ATCC 6260 na latest Scaffold Major Full 2007-05-08 ASM14942v1 Broad Institute GCA_000149425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/425/GCF_000149425.1_ASM14942v1/ na assembly from heterotypic synonym type material na haploid fungi 10609954 10574537 44.000000 0 9 71 Broad Institute GCF_000149425.1-RS_2026_03 2026-03-04 6062 5920 136 19465905 GCF_000149555.1 PRJNA245136 SAMN02953630 AAIM00000000.2 reference genome 334819 117187 Fusarium verticillioides 7600 strain=7600 na latest Chromosome Major Full 2011-07-06 ASM14955v1 Syngenta Biotechnology, Inc. GCA_000149555.1 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/555/GCF_000149555.1_ASM14955v1/ na na na haploid fungi 41791161 41700345 48.500000 11 36 210 Syngenta Biotechnology, Inc. Annotation submitted by Syngenta Biotechnology, Inc. 2023-04-03 16290 15890 396 17823352;20237561;22178648 GCF_000149585.1 PRJNA20041 SAMN02953633 AAJI00000000.1 reference genome 2059318 2059318 Histoplasma mississippiense strain=NAm1 na latest Scaffold Major Full 2007-07-02 ASM14958v1 Broad Institute GCA_000149585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/585/GCF_000149585.1_ASM14958v1/ na na na haploid fungi 32988475 30607615 46.000000 0 275 2867 Broad Institute Annotation submitted by Broad Institute 2017-07-12 9402 9313 77 na GCF_000149615.1 PRJNA17637 SAMN02953635 AAJN00000000.1 reference genome 341663 33178 Aspergillus terreus NIH2624 strain=NIH2624 na latest Scaffold Major Full 2006-09-08 ASM14961v1 Broad Institute GCA_000149615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/615/GCF_000149615.1_ASM14961v1/ na na na haploid fungi 29331195 29197939 53.000000 0 26 267 Broad Institute Annotation submitted by Broad Institute 2025-09-15 10551 10401 147 na GCF_000149645.3 PRJNA18475 SAMN02953637 AAKE00000000.3 reference genome 331117 36630 Aspergillus fischeri NRRL 181 strain=NRRL 181 na latest Scaffold Minor Full 2006-12-14 ASM14964v4 TIGR GCA_000149645.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/645/GCF_000149645.3_ASM14964v4/ na assembly designated as neotype na haploid fungi 31377515 31368615 49.500000 0 163 252 TIGR Annotation submitted by TIGR 2025-09-15 10664 10386 252 18404212 GCF_000149845.2 PRJNA32667 SAMN02953668 AATM00000000.2 reference genome 402676 4897 Schizosaccharomyces japonicus yFS275 strain=yFS275 na latest Scaffold Major Full 2013-08-16 SJ5 Broad Institute GCA_000149845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/845/GCF_000149845.2_SJ5/ na na na haploid fungi 11733154 11135996 44.000000 0 32 87 Broad Institute Annotation submitted by Broad Institute 2017-10-11 5224 4878 337 21511999 GCF_000149925.1 PRJNA66375 SAMN00013043 AAWC00000000.1 reference genome 418459 5297 Puccinia graminis f. sp. tritici CRL 75-36-700-3 strain=CRL 75-36-700-3 na latest Scaffold Major Full 2008-08-26 ASM14992v1 Broad Institute GCA_000149925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/925/GCF_000149925.1_ASM14992v1/ na na na haploid fungi 88644628 81521292 43.500000 0 392 4557 Broad Institute Annotation submitted by Broad Institute 2023-11-13 16308 15799 436 na GCF_000149955.1 PRJNA342688 SAMN02953675 AAXH00000000.1 na 426428 5507 Fusarium oxysporum f. sp. lycopersici 4287 strain=4287 na latest Chromosome Major Full 2015-08-20 ASM14995v2 Broad Institute GCA_000149955.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/149/955/GCF_000149955.1_ASM14995v2/ na na na haploid fungi 61386934 59936783 48.500000 15 114 1362 Broad Institute Annotation submitted by Broad Institute 2023-09-15 21353 20924 420 20237561 GCF_000150035.1 PRJNA20539 SAMN02953681 AAZN00000000.1 reference genome 436907 36033 Vanderwaltozyma polyspora DSM 70294 strain=DSM 70294 na latest Scaffold Major Full 2007-08-17 ASM15003v1 Trinity College Dublin, Ireland GCA_000150035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/035/GCF_000150035.1_ASM15003v1/ na assembly from type material na haploid fungi 14674591 14661591 33.000000 0 281 411 Trinity College Dublin, Ireland Annotation submitted by Trinity College Dublin, Ireland 2025-07-15 5764 5325 241 17494770 GCF_000150115.1 PRJNA786948 SAMN02953690 ABBS00000000.2 reference genome 447093 5037 Histoplasma capsulatum G186AR strain=G186AR na latest Scaffold Major Full 2009-03-23 ASM15011v1 WashU GCA_000150115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/115/GCF_000150115.1_ASM15011v1/ na na na haploid fungi 30438878 30238072 44.500000 0 86 355 WashU Annotation submitted by WashU 2022-04-19 9363 9253 109 na GCF_000150505.1 PRJNA264110 SAMN02953709 ABHY00000000.3 reference genome 483514 4899 Schizosaccharomyces octosporus yFS286 strain=yFS286 na latest Scaffold Major Full 2013-07-30 SO6 Broad Institute GCA_000150505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/505/GCF_000150505.1_SO6/ na na na haploid fungi 11634473 11262981 37.500000 0 5 18 Broad Institute Annotation submitted by Broad Institute 2023-12-29 5347 4986 361 21511999 GCF_000150675.1 PRJNA225532 SAMN02953716 ABJE00000000.1 reference genome 498257 27337 Verticillium dahliae VdLs.17 strain=VdLs.17 na latest Scaffold Major Full 2011-09-15 ASM15067v2 Broad Institute GCA_000150675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/675/GCF_000150675.1_ASM15067v2/ na na na haploid fungi 33828453 32903115 56.000000 8 52 1562 Broad Institute Annotation submitted by Broad Institute 2020-01-30 10811 10535 274 na GCF_000150705.2 PRJNA48325 SAMN02953719 ABKH00000000.2 reference genome 502779 1048829 Paracoccidioides lutzii Pb01 strain=Pb01 na latest Scaffold Major Full 2014-11-03 Paracocci_br_Pb01_V2 Broad Institute GCA_000150705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/705/GCF_000150705.2_Paracocci_br_Pb01_V2/ na assembly from type material na haploid fungi 32925248 32625232 43.000000 0 110 672 Broad Institute Annotation submitted by Broad Institute 2017-10-11 8953 8826 124 22046142 GCF_000150735.1 PRJNA264517 SAMN02953720 ABKI00000000.2 reference genome 502780 121759 Paracoccidioides brasiliensis Pb18 strain=Pb18 na latest Scaffold Major Full 2014-10-24 Paracocci_br_Pb18_V2 Broad Institute GCA_000150735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/735/GCF_000150735.1_Paracocci_br_Pb18_V2/ na na na haploid fungi 29952540 29468725 44.500000 0 57 556 Broad Institute Annotation submitted by Broad Institute 2022-04-18 8522 8390 131 22046142 GCF_000150825.1 PRJNA51263 SAMN02953725 ABPE00000000.1 reference genome 526221 1051613 Verticillium alfalfae VaMs.102 strain=VaMs.102 na latest Scaffold Major Full 2008-06-16 ASM15082v1 Broad Institute GCA_000150825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/825/GCF_000150825.1_ASM15082v1/ na na na haploid fungi 32833495 30299901 56.000000 0 26 4147 Broad Institute Annotation submitted by Broad Institute 2017-07-12 10488 10237 245 na GCF_000150975.2 PRJNA61175 SAMN02953728 ABQE00000000.1 reference genome 535722 63402 Nannizzia gypsea CBS 118893 strain=CBS 118893 na latest Scaffold Minor Full 2015-07-16 MS_CBS118893 Broad Institute GCA_000150975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/150/975/GCF_000150975.2_MS_CBS118893/ na na na haploid fungi 23249403 23092619 48.500000 0 18 317 Broad Institute Annotation submitted by Broad Institute 2017-10-10 9029 8921 108 na GCF_000151105.2 PRJNA224116 SAMN02603625 na reference genome 391623 55802 Thermococcus barophilus MP strain=MP na latest Complete Genome Major Full 2010-12-17 ASM15110v2 Moore Foundation GCA_000151105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/105/GCF_000151105.2_ASM15110v2/ na assembly from type material na haploid archaea 2064237 2064237 41.500000 2 2 2 NCBI RefSeq GCF_000151105.2-RS_2025_11_20 2025-11-20 2284 2215 52 21217005 GCF_000151125.1 PRJNA51431 SAMN02953733 ABSU00000000.1 reference genome 663331 63400 Trichophyton benhamiae CBS 112371 strain=CBS 112371 na latest Contig Major Full 2010-03-17 ASM15112v2 Arthroderma Genome Sequencing Consortium GCA_000151125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/125/GCF_000151125.1_ASM15112v2/ na na na haploid fungi 22224160 22224160 48.500000 0 68 68 Arthroderma Genome Sequencing Consortium Annotation submitted by Arthroderma Genome Sequencing Consortium 2023-12-29 8031 7973 39 na GCF_000151145.1 PRJNA49289 SAMN02953735 ABVF00000000.1 reference genome 554155 63405 Microsporum canis CBS 113480 strain=CBS 113480 na latest Scaffold Major Full 2008-10-22 ASM15114v1 Broad Institute GCA_000151145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/145/GCF_000151145.1_ASM15114v1/ na na na haploid fungi 23241642 23116036 47.500000 0 16 309 Broad Institute Annotation submitted by Broad Institute 2019-11-27 8847 8765 81 na GCF_000151205.2 PRJNA224116 SAMN02603626 na na 246969 246969 Thermococcus sp. AM4 strain=AM4 na latest Complete Genome Major Full 2011-09-08 ASM15120v2 Moore Foundation GCA_000151205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/205/GCF_000151205.2_ASM15120v2/ na na na haploid archaea 2086428 2086428 55.000000 1 1 1 NCBI RefSeq GCF_000151205.2-RS_2024_10_21 2024-10-21 2322 2263 52 22123768 GCF_000151225.1 PRJNA224116 SAMN00008834 ABYV00000000.2 na 521002 2173 Methanobrevibacter smithii DSM 2374 strain=DSM 2374 na latest Scaffold Major Full 2009-10-06 ASM15122v1 WUGSC GCA_000151225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/225/GCF_000151225.1_ASM15122v1/ na na na haploid archaea 1729275 1727775 31.500000 0 10 25 NCBI RefSeq GCF_000151225.1-RS_2025_12_08 2025-12-08 1728 1655 42 na GCF_000151245.1 PRJNA224116 SAMN00008835 ABYW00000000.1 na 483214 2173 Methanobrevibacter smithii DSM 2375 strain=DSM 2375 na latest Scaffold Major Full 2008-11-13 ASM15124v1 Washington University Genome Sequencing Center GCA_000151245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/245/GCF_000151245.1_ASM15124v1/ na na na haploid archaea 1713248 1704865 31.500000 0 9 24 NCBI RefSeq GCF_000151245.1-RS_2025_12_07 2025-12-07 1711 1638 43 na GCF_000151355.1 PRJNA51499 SAMN02746079 ACJF00000000.1 reference genome 660122 2747968 Fusarium vanettenii 77-13-4 na 77-13-4 latest Scaffold Major Full 2009-08-27 v2.0 DOE Joint Genome Institute GCA_000151355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/355/GCF_000151355.1_v2.0/ na na na haploid fungi 51286497 51230363 51.000000 17 209 233 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-08-07 15708 15708 0 19714214 GCF_000151425.1 PRJNA65025 SAMN02953760 ACPH00000000.1 reference genome 559305 5551 Trichophyton rubrum CBS 118892 strain=CBS 118892 na latest Scaffold Major Full 2009-11-30 ASM15142v1 Broad Institute GCA_000151425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/425/GCF_000151425.1_ASM15142v1/ na na na haploid fungi 22502330 22100498 48.500000 0 35 622 Broad Institute Annotation submitted by Broad Institute 2022-04-18 8713 8616 96 na GCF_000151505.1 PRJNA51485 SAMN02953766 ACYE00000000.1 reference genome 663202 63417 Trichophyton verrucosum HKI 0517 strain=HKI 0517 na latest Scaffold Major Full 2010-03-17 ASM15150v1 Arthroderma Genome Sequencing Consortium GCA_000151505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/505/GCF_000151505.1_ASM15150v1/ na na na haploid fungi 22540967 22539417 48.000000 0 523 612 NCBI RefSeq Annotation submitted by NCBI RefSeq 2012-09-13 8075 8017 41 na GCF_000151645.1 PRJNA49017 SAMEA2272024 CABJ00000000.1 reference genome 39416 39416 Tuber melanosporum strain=Mel28 na latest Scaffold Major Full 2010-05-03 ASM15164v1 The French-Italian Tuber Genome Consortium GCA_000151645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/151/645/GCF_000151645.1_ASM15164v1/ na na na haploid fungi 124945702 123533734 45.000000 0 398 4440 The French-Italian Tuber Genome Consortium Annotation submitted by The French-Italian Tuber Genome Consortium 2022-12-20 7420 7420 0 20348908 GCF_000152065.3 PRJNA224116 SAMN02603739 na na 889513 1719 Corynebacterium pseudotuberculosis I19 strain=I19 na latest Complete Genome Major Full 2019-12-13 ASM15206v3 Rede Paraense de Genômica e Proteômica GCA_000152065.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/065/GCF_000152065.3_ASM15206v3/ na na na haploid bacteria 2337350 2337350 52.000000 1 1 1 NCBI RefSeq GCF_000152065.3-RS_2026_06_30 2026-06-30 2122 2006 63 21037006;31705053 GCF_000152165.1 PRJNA224116 SAMN02603384 na na 630588 487 Neisseria meningitidis alpha710 strain=alpha710 na latest Complete Genome Major Full 2010-10-13 ASM15216v1 Institute for Hygiene and Microbiology, Wuerzburg University, Germany GCA_000152165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/165/GCF_000152165.1_ASM15216v1/ na na na haploid bacteria 2242947 2242947 51.500000 1 1 1 NCBI RefSeq GCF_000152165.1-RS_2025_04_15 2025-04-15 2252 2011 73 20709895 GCF_000152185.1 PRJNA224116 SAMN00115033 AEIQ00000000.1 na 188626 188626 Dermacoccus sp. Ellin185 strain=Ellin185 na latest Scaffold Major Full 2010-10-13 ASM15218v1 J. Craig Venter Institute GCA_000152185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/185/GCF_000152185.1_ASM15218v1/ na na na haploid bacteria 3115364 3115349 69.000000 0 131 132 NCBI RefSeq GCF_000152185.1-RS_2024_08_22 2024-08-22 2954 2810 58 na GCF_000152245.2 PRJNA224116 SAMN02603161 na reference genome 53442 53442 Eubacterium callanderi strain=KIST612 na latest Complete Genome Major Full 2011-11-30 ASM15224v2 Computational and Synthetic Biology Laboratory GCA_000152245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/245/GCF_000152245.2_ASM15224v2/ na na na haploid bacteria 4316707 4316707 47.500000 1 1 1 NCBI RefSeq GCF_000152245.2-RS_2026_03_30 2026-03-30 4173 4067 78 21036996 GCF_000152265.2 PRJNA224116 SAMN02604346 na reference genome 333146 97393 Ferroplasma acidarmanus Fer1 strain=Fer1 na latest Complete Genome Major Full 2013-06-26 ASM15226v2 DOE Joint Genome Institute GCA_000152265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/265/GCF_000152265.2_ASM15226v2/ na assembly from type material na haploid archaea 1935211 1935211 36.500000 1 1 1 NCBI RefSeq GCF_000152265.2-RS_2025_11_21 2025-11-21 1972 1902 50 17267615 GCF_000152285.1 PRJNA224116 SAMN02469820 AACX00000000.1 na 271848 57975 Burkholderia thailandensis E264 strain=ATCC 700388 na latest Chromosome Major Full 2007-04-11 ASM15228v1 Genome Institute of Singapore GCA_000152285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/285/GCF_000152285.1_ASM15228v1/ na assembly from type material na haploid bacteria 6354340 6304318 68.000000 2 2 44 NCBI RefSeq GCF_000152285.1-RS_2026_03_20 2026-03-20 5534 5159 42 16725056 GCF_000152305.1 PRJNA224116 SAMN02435893 AAHN00000000.2 na 412021 13373 Burkholderia mallei ATCC 10399 strain=ATCC 10399 na latest Scaffold Major Full 2007-11-20 ASM15230v1 TIGR GCA_000152305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/305/GCF_000152305.1_ASM15230v1/ na na na haploid bacteria 5938083 5933783 68.500000 0 63 106 NCBI RefSeq GCF_000152305.1-RS_2026_02_14 2026-02-14 5408 5022 71 na GCF_000152325.1 PRJNA224116 SAMN02435875 AAHR00000000.2 na 331109 28450 Burkholderia pseudomallei 1655 strain=1655 na latest Scaffold Major Full 2008-04-17 ASM15232v1 TIGR GCA_000152325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/325/GCF_000152325.1_ASM15232v1/ na na na haploid bacteria 7041127 7029727 68.000000 0 80 194 NCBI RefSeq GCF_000152325.1-RS_2026_02_14 2026-02-14 6434 6107 63 na GCF_000152345.1 PRJNA224116 SAMN02435833 AAHV00000000.2 na 331978 28450 Burkholderia pseudomallei Pasteur 52237 strain=Pasteur 52237 na latest Scaffold Major Full 2007-10-09 ASM15234v1 TIGR GCA_000152345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/345/GCF_000152345.1_ASM15234v1/ na na na haploid bacteria 7360986 7347086 68.000000 0 78 217 NCBI RefSeq GCF_000152345.1-RS_2026_02_12 2026-02-12 6674 6365 69 na GCF_000152365.1 PRJNA224116 SAMN02435876 AAHW00000000.2 na 320374 28450 Burkholderia pseudomallei S13 strain=S13 na latest Scaffold Major Full 2008-03-07 ASM15236v1 TIGR GCA_000152365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/365/GCF_000152365.1_ASM15236v1/ na na na haploid bacteria 7398556 7388856 68.000000 0 72 169 NCBI RefSeq GCF_000152365.1-RS_2026_02_14 2026-02-14 6722 6472 65 na GCF_000152385.1 PRJNA224116 SAMN02435848 AAIQ00000000.2 na 334802 13373 Burkholderia mallei FMH strain=FMH na latest Scaffold Major Full 2007-05-18 ASM15238v1 TIGR GCA_000152385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/385/GCF_000152385.1_ASM15238v1/ na na na haploid bacteria 5899347 5814647 68.500000 0 12 205 NCBI RefSeq GCF_000152385.1-RS_2026_02_14 2026-02-14 5388 4995 70 na GCF_000152405.1 PRJNA224116 SAMN02435849 AAIR00000000.2 na 334803 13373 Burkholderia mallei JHU strain=JHU na latest Scaffold Major Full 2007-05-18 ASM15240v1 TIGR GCA_000152405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/405/GCF_000152405.1_ASM15240v1/ na na na haploid bacteria 5893993 5713799 68.500000 0 10 184 NCBI RefSeq GCF_000152405.1-RS_2026_02_14 2026-02-14 5326 4945 66 na GCF_000152425.1 PRJNA224116 SAMN02435880 AAKF00000000.3 na 345072 666 Vibrio cholerae MO10 strain=MO10 na latest Scaffold Major Full 2008-08-28 ASM15242v1 TIGR GCA_000152425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/425/GCF_000152425.1_ASM15242v1/ na na na haploid bacteria 4079638 4034412 47.500000 0 27 84 NCBI RefSeq GCF_000152425.1-RS_2026_04_21 2026-04-21 3707 3578 80 na GCF_000152465.2 PRJNA224116 SAMN02435835 AAKI00000000.3 na 345075 666 Vibrio cholerae V51 strain=V51 na latest Scaffold Major Full 2015-07-23 ASM15246v2 Broad Institute GCA_000152465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/465/GCF_000152465.2_ASM15246v2/ na na na haploid bacteria 4208620 4131228 47.500000 0 80 143 NCBI RefSeq GCF_000152465.2-RS_2026_01_20 2026-01-20 3885 3640 84 na GCF_000152485.1 PRJNA224116 SAMN02435854 AAKK00000000.2 na 150340 150340 Vibrio antiquarius strain=EX25 na latest Scaffold Major Full 2007-07-13 ASM15248v1 TIGR GCA_000152485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/485/GCF_000152485.1_ASM15248v1/ na assembly from type material na haploid bacteria 4855962 4844262 45.000000 0 105 222 NCBI RefSeq GCF_000152485.1-RS_2026_01_21 2026-01-21 4443 4220 104 na GCF_000152605.1 PRJNA224116 SAMN02436163 AALV00000000.1 na 52598 52598 Sulfitobacter sp. EE-36 strain=EE-36 na latest Scaffold Major Full 2006-07-19 ASM15260v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/605/GCF_000152605.1_ASM15260v1/ na na na haploid bacteria 3548498 3547243 60.500000 0 5 15 NCBI RefSeq GCF_000152605.1-RS_2024_07_28 2024-07-28 3467 3367 67 na GCF_000152625.1 PRJNA224116 SAMN02436080 AALY00000000.1 reference genome 89187 314263 Roseovarius nubinhibens ISM strain=ISM na latest Scaffold Major Full 2006-05-04 ASM15262v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/625/GCF_000152625.1_ASM15262v1/ na assembly from type material na haploid bacteria 3676244 3668667 64.000000 0 4 10 NCBI RefSeq GCF_000152625.1-RS_2026_03_30 2026-03-30 3561 3488 55 na GCF_000152645.1 PRJNA224116 SAMN02436108 AALZ00000000.1 na 314267 314267 Sulfitobacter sp. NAS-14.1 strain=NAS-14.1 na latest Scaffold Major Full 2006-07-19 ASM15264v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/645/GCF_000152645.1_ASM15264v1/ na na na haploid bacteria 4010516 4002069 60.000000 0 11 27 NCBI RefSeq GCF_000152645.1-RS_2025_08_18 2025-08-18 3953 3802 65 na GCF_000152685.2 PRJNA224116 SAMN02435889 AAMM00000000.2 na 360118 28450 Burkholderia pseudomallei 406e strain=406e na latest Scaffold Major Full 2014-05-27 ASM15268v2 TIGR GCA_000152685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/685/GCF_000152685.2_ASM15268v2/ na na na haploid bacteria 7339816 7322716 68.000000 0 100 271 NCBI RefSeq GCF_000152685.2-RS_2026_01_14 2026-01-14 6633 6298 85 na GCF_000152705.1 PRJNA224116 SAMN00622971 AAMN00000000.1 na 313589 313589 Janibacter sp. HTCC2649 strain=HTCC2649 na latest Scaffold Major Full 2006-04-07 ASM15270v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/705/GCF_000152705.1_ASM15270v1/ na na na haploid bacteria 4235068 4228723 68.500000 0 7 14 NCBI RefSeq GCF_000152705.1-RS_2024_08_22 2024-08-22 4070 3989 55 21075932 GCF_000152725.1 PRJNA224116 SAMN02436081 AAMO00000000.1 reference genome 252305 314255 Pseudooceanicola batsensis HTCC2597 strain=HTCC2597 na latest Scaffold Major Full 2006-05-02 ASM15272v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/725/GCF_000152725.1_ASM15272v1/ na assembly from type material na haploid bacteria 4440389 4437668 66.000000 0 7 23 NCBI RefSeq GCF_000152725.1-RS_2025_12_10 2025-12-10 4221 4119 51 20418400 GCF_000152745.1 PRJNA224116 SAMN02436134 AAMQ00000000.1 na 314254 314254 Oceanicaulis sp. HTCC2633 strain=HTCC2633 na latest Scaffold Major Full 2006-04-11 ASM15274v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/745/GCF_000152745.1_ASM15274v1/ na na na haploid bacteria 3172051 3168201 63.500000 0 3 15 NCBI RefSeq GCF_000152745.1-RS_2024_08_22 2024-08-22 3074 3006 53 21036991 GCF_000152765.1 PRJNA224116 SAMN02436082 AAMR00000000.1 na 314291 29497 Vibrio splendidus 12B01 strain=12B01 na latest Scaffold Major Full 2006-05-04 ASM15276v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/765/GCF_000152765.1_ASM15276v1/ na na na haploid bacteria 5702234 5596386 44.000000 0 26 119 NCBI RefSeq GCF_000152765.1-RS_2026_02_14 2026-02-14 4999 4769 106 na GCF_000152785.1 PRJNA224116 SAMN02436109 AAMS00000000.1 na 314232 245188 Yoonia vestfoldensis SKA53 strain=SKA53 na latest Scaffold Major Full 2006-04-07 ASM15278v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/785/GCF_000152785.1_ASM15278v1/ na na na haploid bacteria 3066852 3063691 60.000000 0 3 14 NCBI RefSeq GCF_000152785.1-RS_2025_06_05 2025-06-05 3043 2959 50 na GCF_000152805.1 PRJNA224116 SAMN02436110 AAMT00000000.1 na 314271 404236 Maritimibacter alkaliphilus HTCC2654 strain=HTCC2654 na latest Scaffold Major Full 2006-06-29 ASM15280v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/805/GCF_000152805.1_ASM15280v1/ na assembly from type material na haploid bacteria 4536113 4529231 64.000000 0 7 46 NCBI RefSeq GCF_000152805.1-RS_2025_07_24 2025-07-24 4507 4406 49 20729358 GCF_000152825.2 PRJNA224116 SAMN02603918 na reference genome 314260 208216 Parvularcula bermudensis HTCC2503 strain=HTCC2503 na latest Complete Genome Major Full 2010-08-16 ASM15282v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/825/GCF_000152825.2_ASM15282v2/ na assembly from type material na haploid bacteria 2902643 2902643 60.500000 1 1 1 NCBI RefSeq GCF_000152825.2-RS_2026_03_27 2026-03-27 2711 2637 50 21037002 GCF_000152845.1 PRJNA224116 SAMN02436164 AAMV00000000.1 na 314264 314264 Roseovarius sp. 217 strain=217 na latest Scaffold Major Full 2006-06-29 ASM15284v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/845/GCF_000152845.1_ASM15284v1/ na na na haploid bacteria 4770736 4762632 61.000000 0 6 37 NCBI RefSeq GCF_000152845.1-RS_2025_08_18 2025-08-18 4692 4525 49 na GCF_000152865.1 PRJNA224116 SAMN02436135 AAMW00000000.1 na 237727 237727 Erythrobacter sp. NAP1 strain=NAP1 na latest Scaffold Major Full 2006-04-07 ASM15286v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/865/GCF_000152865.1_ASM15286v1/ na na na haploid bacteria 3266173 3265346 61.000000 0 2 4 NCBI RefSeq GCF_000152865.1-RS_2024_08_22 2024-08-22 3169 3111 50 21952547 GCF_000152885.1 PRJNA224116 SAMN02436083 AAMX00000000.1 reference genome 314276 190892 Idiomarina baltica OS145 strain=OS145 na latest Scaffold Major Full 2006-04-07 ASM15288v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/885/GCF_000152885.1_ASM15288v1/ na assembly from type material na haploid bacteria 2770272 2722127 47.500000 0 15 70 NCBI RefSeq GCF_000152885.1-RS_2026_04_14 2026-04-14 2606 2524 48 na GCF_000152905.1 PRJNA224116 SAMN02436084 AAMY00000000.1 na 314253 314253 Nitrobacter sp. Nb-311A strain=Nb-311A na latest Scaffold Major Full 2006-04-11 ASM15290v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/905/GCF_000152905.1_ASM15290v1/ na na na haploid bacteria 4107280 4104352 60.500000 0 44 63 NCBI RefSeq GCF_000152905.1-RS_2024_08_22 2024-08-22 3933 3662 59 na GCF_000152925.2 PRJNA224116 SAMN02436136 na na 313590 313590 Dokdonia sp. MED134 strain=MED134 na latest Complete Genome Major Full 2014-09-12 ASM15292v3 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152925.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/925/GCF_000152925.2_ASM15292v3/ na na na haploid bacteria 3302548 3302548 38.000000 1 1 1 NCBI RefSeq GCF_000152925.2-RS_2025_01_07 2025-01-07 2950 2893 55 17215843;22003006;25136122 GCF_000152945.2 PRJNA224116 SAMN02603920 na na 313598 313598 Polaribacter sp. MED152 strain=MED152 na latest Complete Genome Major Full 2013-03-29 ASM15294v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/945/GCF_000152945.2_ASM15294v2/ na na na haploid bacteria 2961474 2961474 30.500000 1 1 1 NCBI RefSeq GCF_000152945.2-RS_2024_07_29 2024-07-29 2673 2623 45 17215843;18552178 GCF_000152965.1 PRJNA224116 SAMN02436137 AANB00000000.1 na 314262 314262 Roseobacter sp. MED193 strain=MED193 na latest Scaffold Major Full 2006-06-29 ASM15296v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/965/GCF_000152965.1_ASM15296v1/ na na na haploid bacteria 4674070 4652716 57.500000 0 4 19 NCBI RefSeq GCF_000152965.1-RS_2024_07_28 2024-07-28 4421 4300 62 na GCF_000152985.1 PRJNA224116 SAMN02436111 AANC00000000.1 reference genome 398720 360293 Leeuwenhoekiella blandensis MED217 strain=MED217 na latest Scaffold Major Full 2006-04-07 ASM15298v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000152985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/152/985/GCF_000152985.1_ASM15298v1/ na assembly from type material na haploid bacteria 4244565 4238065 40.000000 0 1 15 NCBI RefSeq GCF_000152985.1-RS_2025_12_11 2025-12-11 3681 3602 49 17215843 GCF_000153005.1 PRJNA224116 SAMN02436138 AAND00000000.1 na 314290 314290 Vibrio sp. MED222 strain=MED222 na latest Scaffold Major Full 2006-06-29 ASM15300v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/005/GCF_000153005.1_ASM15300v1/ na na na haploid bacteria 4984034 4891901 44.000000 0 21 99 NCBI RefSeq GCF_000153005.1-RS_2025_08_25 2025-08-25 4391 4193 129 na GCF_000153025.1 PRJNA224116 SAMN02436165 AANE00000000.1 na 314277 314277 Marinomonas sp. MED121 strain=MED121 na latest Scaffold Major Full 2006-04-11 ASM15302v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/025/GCF_000153025.1_ASM15302v1/ na na na haploid bacteria 5153226 5121076 41.000000 0 13 47 NCBI RefSeq GCF_000153025.1-RS_2024_05_27 2024-05-27 4713 4577 96 na GCF_000153045.1 PRJNA224116 SAMN02436085 AANO00000000.1 na 69042 69042 Synechococcus sp. WH 5701 strain=WH 5701 na latest Scaffold Major Full 2006-05-04 ASM15304v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/045/GCF_000153045.1_ASM15304v1/ na na na haploid bacteria 3280236 3043834 65.500000 0 116 135 NCBI RefSeq GCF_000153045.1-RS_2024_08_13 2024-08-13 3331 3168 59 na GCF_000153065.1 PRJNA224116 SAMN02436139 AANP00000000.1 na 221360 221360 Synechococcus sp. RS9917 strain=RS9917; RCC556 na latest Scaffold Major Full 2006-05-04 ASM15306v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/065/GCF_000153065.1_ASM15306v1/ na na na haploid bacteria 2584918 2579542 64.500000 0 1 9 NCBI RefSeq GCF_000153065.1-RS_2024_08_22 2024-08-22 2755 2672 49 na GCF_000153085.1 PRJNA224116 SAMN02435874 AANX00000000.2 na 370895 13373 Burkholderia mallei 2002721280 strain=2002721280 na latest Scaffold Major Full 2007-05-22 ASM15308v1 TIGR GCA_000153085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/085/GCF_000153085.1_ASM15308v1/ na na na haploid bacteria 5698168 5690468 68.500000 0 131 208 NCBI RefSeq GCF_000153085.1-RS_2026_02_15 2026-02-15 5248 4808 61 na GCF_000153105.1 PRJNA224116 SAMN02436112 AANZ00000000.1 reference genome 314230 124 Blastopirellula marina DSM 3645 strain=DSM 3645 na latest Scaffold Major Full 2006-04-03 ASM15310v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/105/GCF_000153105.1_ASM15310v1/ na assembly from type material na haploid bacteria 6663851 6653746 57.000000 0 3 64 NCBI RefSeq GCF_000153105.1-RS_2025_11_20 2025-11-20 5409 5311 59 na GCF_000153125.2 PRJNA224116 SAMN02436113 AAOA00000000.2 reference genome 314285 393662 Congregibacter litoralis KT71 strain=KT71 na latest Chromosome Major Full 2013-12-09 ASM15312v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/125/GCF_000153125.2_ASM15312v2/ na assembly from type material na haploid bacteria 4351117 4350617 57.500000 1 1 6 NCBI RefSeq GCF_000153125.2-RS_2026_06_30 2026-06-30 3919 3812 53 17299055;19287491 GCF_000153165.2 PRJNA224116 SAMN02603923 na na 313603 313603 Maribacter sp. HTCC2170 strain=HTCC2170 na latest Complete Genome Major Full 2010-08-24 ASM15316v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/165/GCF_000153165.2_ASM15316v2/ na na na haploid bacteria 3868304 3868304 37.000000 1 1 1 NCBI RefSeq GCF_000153165.2-RS_2025_01_08 2025-01-08 3408 3355 49 21037013 GCF_000153185.1 PRJNA224116 SAMN02436140 AAOE00000000.1 reference genome 314283 374838 Reinekea blandensis MED297 strain=MED297 na latest Scaffold Major Full 2006-05-04 ASM15318v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/185/GCF_000153185.1_ASM15318v1/ na assembly from type material na haploid bacteria 4526761 4506331 52.500000 0 10 61 NCBI RefSeq GCF_000153185.1-RS_2026_03_15 2026-03-15 4191 4100 68 na GCF_000153205.1 PRJNA224116 SAMN02436141 AAOF00000000.1 reference genome 314278 35797 Nitrococcus mobilis Nb-231 strain=Nb-231 na latest Scaffold Major Full 2006-04-11 ASM15320v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/205/GCF_000153205.1_ASM15320v1/ na assembly from type material na haploid bacteria 3623681 3617638 60.000000 0 9 43 NCBI RefSeq GCF_000153205.1-RS_2025_12_13 2025-12-13 3460 3287 53 na GCF_000153225.1 PRJNA224116 SAMN02436114 AAOG00000000.1 reference genome 313594 531 Polaribacter irgensii 23-P strain=23-P na latest Scaffold Major Full 2006-05-04 ASM15322v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/225/GCF_000153225.1_ASM15322v1/ na assembly from type material na haploid bacteria 2763458 2745458 34.500000 0 2 7 NCBI RefSeq GCF_000153225.1-RS_2025_07_25 2025-07-25 2431 2364 48 na GCF_000153245.1 PRJNA224116 SAMN00622973 AAOH00000000.1 na 87626 314281 Pseudoalteromonas tunicata D2 strain=D2 na latest Scaffold Major Full 2006-07-19 ASM15324v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/245/GCF_000153245.1_ASM15324v1/ na assembly from type material na haploid bacteria 4994813 4982425 40.000000 0 37 42 NCBI RefSeq GCF_000153245.1-RS_2025_08_05 2025-08-05 4394 4198 132 na GCF_000153265.1 PRJNA224116 SAMN02436086 AAOJ00000000.1 na 314292 661 Photobacterium angustum S14 strain=S14 na latest Scaffold Major Full 2006-06-29 ASM15326v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/265/GCF_000153265.1_ASM15326v1/ na na na haploid bacteria 5181543 5101447 39.500000 0 25 45 NCBI RefSeq GCF_000153265.1-RS_2025_12_10 2025-12-10 4654 4396 189 19805210 GCF_000153285.1 PRJNA224116 SAMN02436160 AAOK00000000.1 na 59931 59931 Synechococcus sp. WH 7805 strain=WH 7805 na latest Scaffold Major Full 2006-05-04 ASM15328v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/285/GCF_000153285.1_ASM15328v1/ na na na haploid bacteria 2627046 2620367 57.500000 0 3 13 NCBI RefSeq GCF_000153285.1-RS_2024_08_13 2024-08-13 2744 2667 54 na GCF_000153305.1 PRJNA224116 SAMN02436142 AAOT00000000.1 reference genome 314256 252302 Oceanicola granulosus HTCC2516 strain=HTCC2516 na latest Scaffold Major Full 2006-05-02 ASM15330v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/305/GCF_000153305.1_ASM15330v1/ na assembly from type material na haploid bacteria 4053139 4039111 70.500000 0 9 85 NCBI RefSeq GCF_000153305.1-RS_2026_05_01 2026-05-01 3848 3729 68 20418400 GCF_000153325.1 PRJNA224116 SAMN02436115 AAOU00000000.1 na 121723 121723 Photobacterium sp. SKA34 strain=SKA34 na latest Scaffold Major Full 2006-05-02 ASM15332v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/325/GCF_000153325.1_ASM15332v1/ na na na haploid bacteria 4992772 4946988 39.500000 0 18 88 NCBI RefSeq GCF_000153325.1-RS_2024_08_13 2024-08-13 4545 4219 165 na GCF_000153345.1 PRJNA224116 SAMN02436143 AAOW00000000.1 reference genome 207954 207954 Neptuniibacter caesariensis strain=MED92 na latest Scaffold Major Full 2006-05-02 ASM15334v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/345/GCF_000153345.1_ASM15334v1/ na assembly from type material na haploid bacteria 3924755 3873219 46.500000 0 6 60 NCBI RefSeq GCF_000153345.1-RS_2026_03_20 2026-03-20 3673 3609 50 na GCF_000153365.1 PRJNA224116 SAMN00622969 AAOX00000000.1 na 313627 313627 Bacillus sp. NRRL B-14911 strain=NRRL B-14911 na latest Scaffold Major Full 2006-03-31 ASM15336v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/365/GCF_000153365.1_ASM15336v1/ na na na haploid bacteria 5116500 5085825 45.500000 0 75 109 NCBI RefSeq GCF_000153365.1-RS_2025_08_25 2025-08-25 5154 4952 108 na GCF_000153405.2 PRJNA224116 SAMN00622974 na na 314282 314282 Psychromonas sp. CNPT3 strain=CNPT3 na latest Complete Genome Major Full 2013-03-22 ASM15340v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/405/GCF_000153405.2_ASM15340v2/ na na na haploid bacteria 3052410 3052410 38.500000 1 1 1 NCBI RefSeq GCF_000153405.2-RS_2025_08_25 2025-08-25 2701 2561 124 na GCF_000153425.1 PRJNA224116 SAMN02436087 AAPH00000000.1 reference genome 314280 74109 Photobacterium profundum 3TCK strain=3TCK na latest Scaffold Major Full 2006-05-02 ASM15342v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/425/GCF_000153425.1_ASM15342v1/ na na na haploid bacteria 6186325 6107610 41.500000 0 11 82 NCBI RefSeq GCF_000153425.1-RS_2026_04_14 2026-04-14 5543 5310 168 na GCF_000153465.1 PRJNA224116 SAMN02436161 AAPJ00000000.1 reference genome 287752 651183 Aurantimonas manganoxydans SI85-9A1 strain=SI85-9A1 na latest Scaffold Major Full 2006-04-07 ASM15346v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/465/GCF_000153465.1_ASM15346v1/ na assembly from type material na haploid bacteria 4326814 4325257 66.500000 0 22 35 NCBI RefSeq GCF_000153465.1-RS_2026_03_30 2026-03-30 4112 3969 64 18344346 GCF_000153485.2 PRJNA224116 SAMN02603919 na reference genome 313595 57029 Psychroflexus torquis ATCC 700755 strain=ATCC 700755 na latest Complete Genome Major Full 2012-10-09 ASM15348v2 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/485/GCF_000153485.2_ASM15348v2/ na assembly from type material na haploid bacteria 4321832 4321832 34.500000 1 1 1 NCBI RefSeq GCF_000153485.2-RS_2026_05_01 2026-05-01 3821 3625 50 na GCF_000153505.1 PRJNA224116 SAMN02436162 AAPS00000000.1 na 314288 663 Vibrio alginolyticus 12G01 strain=12G01 na latest Scaffold Major Full 2006-06-29 ASM15350v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/505/GCF_000153505.1_ASM15350v1/ na na na haploid bacteria 5257379 5160431 44.500000 0 20 106 NCBI RefSeq GCF_000153505.1-RS_2026_02_15 2026-02-15 4657 4471 89 na GCF_000153525.1 PRJNA224116 SAMN02436088 AAPV00000000.1 na 314261 198252 Candidatus Pelagibacter ubique HTCC1002 strain=HTCC1002 na latest Scaffold Major Full 2006-05-02 ASM15352v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/525/GCF_000153525.1_ASM15352v1/ na na na haploid bacteria 1328618 1327604 30.000000 0 4 5 NCBI RefSeq GCF_000153525.1-RS_2026_06_09 2026-06-09 1408 1367 36 na GCF_000153545.1 PRJNA224116 SAMN02436131 AAQG00000000.1 na 314266 314266 Sphingomonas sp. SKA58 strain=SKA58 na latest Scaffold Major Full 2006-07-19 ASM15354v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/545/GCF_000153545.1_ASM15354v1/ na na na haploid bacteria 3955737 3948000 63.000000 0 5 41 NCBI RefSeq GCF_000153545.1-RS_2025_08_25 2025-08-25 3867 3711 73 na GCF_000153565.1 PRJNA224116 SAMN02436132 AAQH00000000.1 na 207949 207949 Bermanella marisrubri strain=RED65 na latest Scaffold Major Full 2006-05-02 ASM15356v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/565/GCF_000153565.1_ASM15356v1/ na assembly from type material na haploid bacteria 3552236 3527084 44.000000 0 26 47 NCBI RefSeq GCF_000153565.1-RS_2026_04_17 2026-04-17 3310 3234 60 na GCF_000153605.1 PRJNA224116 SAMN00253843 AARF00000000.1 na 392917 1464 Paenibacillus larvae subsp. larvae BRL-230010 na BRL-230010 latest Scaffold Major Full 2006-08-18 ASM15360v1 Baylor College of Medicine GCA_000153605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/605/GCF_000153605.1_ASM15360v1/ na na na haploid bacteria 4033192 3982929 44.000000 0 362 573 NCBI RefSeq GCF_000153605.1-RS_2026_03_20 2026-03-20 4534 4074 73 17069642 GCF_000153625.3 PRJNA224116 SAMN02469324 AARG00000000.1 na 393480 76857 Fusobacterium polymorphum ATCC 10953 strain=ATCC 10953 na latest Chromosome Major Full 2007-05-30 ASM15362v1 Baylor College of Medicine GCA_000153625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/625/GCF_000153625.3_ASM15362v1/ na assembly from type material na haploid bacteria 2441632 2440232 27.000000 2 2 15 NCBI RefSeq GCF_000153625.3-RS_2026_04_14 2026-04-14 2394 2287 50 17668047 GCF_000153645.1 PRJNA224116 SAMN02469325 AASA00000000.1 na 272629 75985 Mannheimia haemolytica PHL213 strain=PHL213 na latest Scaffold Major Full 2007-06-15 ASM15364v1 Baylor College of Medicine GCA_000153645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/645/GCF_000153645.1_ASM15364v1/ na na na haploid bacteria 2672813 2568460 41.000000 0 103 151 NCBI RefSeq GCF_000153645.1-RS_2026_01_02 2026-01-02 2694 2522 55 17015664 GCF_000153665.1 PRJNA224116 SAMN00001491 AASB00000000.2 na 450394 1280 Staphylococcus aureus subsp. aureus USA300_TCH959 strain=USA300_TCH959 na latest Scaffold Major Full 2009-08-12 ASM15366v1 Baylor College of Medicine GCA_000153665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/665/GCF_000153665.1_ASM15366v1/ na na na haploid bacteria 2845480 2830017 33.000000 1 174 256 NCBI RefSeq GCF_000153665.1-RS_2025_08_12 2025-08-12 2881 2723 63 17986343 GCF_000153685.2 PRJNA224116 SAMN03081423 na na 395095 1773 Mycobacterium tuberculosis str. Haarlem strain=Haarlem na latest Complete Genome Major Full 2013-09-11 ASM15368v2 Broad Institute GCA_000153685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/685/GCF_000153685.2_ASM15368v2/ na na na haploid bacteria 4408224 4408224 65.500000 1 1 1 NCBI RefSeq GCF_000153685.2-RS_2025_06_29 2025-06-29 4151 3914 51 na GCF_000153705.1 PRJNA224116 SAMN02436126 AATP00000000.1 reference genome 314231 217511 Fulvimarina pelagi HTCC2506 strain=HTCC2506 na latest Scaffold Major Full 2006-10-23 ASM15370v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/705/GCF_000153705.1_ASM15370v1/ na assembly from type material na haploid bacteria 3806238 3802689 61.000000 0 4 20 NCBI RefSeq GCF_000153705.1-RS_2026_04_23 2026-04-23 3543 3420 62 20639329 GCF_000153725.1 PRJNA224116 SAMN02436105 AATQ00000000.1 na 314265 344736 Salipiger bermudensis HTCC2601 strain=HTCC2601 na latest Scaffold Major Full 2006-10-23 ASM15372v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/725/GCF_000153725.1_ASM15372v1/ na assembly from type material na haploid bacteria 5482983 5425920 66.500000 0 6 103 NCBI RefSeq GCF_000153725.1-RS_2025_09_23 2025-09-23 5191 5011 71 20729358 GCF_000153765.1 PRJNA224116 SAMN02436127 AATS00000000.1 reference genome 314345 314344 Mariprofundus ferrooxydans PV-1 strain=PV-1 na latest Scaffold Major Full 2006-10-23 ASM15376v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/765/GCF_000153765.1_ASM15376v1/ na assembly from type material na haploid bacteria 2992730 2867087 54.000000 0 4 32 NCBI RefSeq GCF_000153765.1-RS_2025_12_11 2025-12-11 2816 2725 59 na GCF_000153785.2 PRJNA224116 SAMN02435859 AATY00000000.2 na 404974 666 Vibrio cholerae AM-19226 strain=AM-19226 na latest Scaffold Major Full 2015-07-23 ASM15378v3 Broad Institute GCA_000153785.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/785/GCF_000153785.2_ASM15378v3/ na na na haploid bacteria 4053126 4037687 47.500000 0 33 62 NCBI RefSeq GCF_000153785.2-RS_2026_01_21 2026-01-21 3773 3607 108 na GCF_000153805.1 PRJNA224116 SAMN02436154 AATZ00000000.1 na 313625 313625 Synechococcus sp. BL107 strain=BL107 na latest Scaffold Major Full 2006-10-23 ASM15380v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/805/GCF_000153805.1_ASM15380v1/ na na na haploid bacteria 2285034 2283377 54.000000 0 1 6 NCBI RefSeq GCF_000153805.1-RS_2024_08_13 2024-08-13 2485 2423 51 na GCF_000153825.1 PRJNA224116 SAMN02436107 AAUA00000000.1 na 221359 221359 Synechococcus sp. RS9916 strain=RS9916 na latest Scaffold Major Full 2006-10-23 ASM15382v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000153825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/825/GCF_000153825.1_ASM15382v1/ na na na haploid bacteria 2664873 2664465 60.000000 0 1 4 NCBI RefSeq GCF_000153825.1-RS_2024_08_13 2024-08-13 2808 2733 53 na GCF_000153865.1 PRJNA224116 SAMN02435868 AAUS00000000.2 na 412967 666 Vibrio cholerae MAK 757 strain=MAK 757 na latest Scaffold Major Full 2010-06-04 ASM15386v1 TIGR GCA_000153865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/865/GCF_000153865.1_ASM15386v1/ na na na haploid bacteria 3936003 3919418 47.500000 0 12 43 NCBI RefSeq GCF_000153865.1-RS_2026_01_12 2026-01-12 3537 3401 32 na GCF_000153885.1 PRJNA224116 SAMN00627091 AAVL00000000.2 na 411463 39496 Eubacterium ventriosum ATCC 27560 strain=ATCC 27560 na latest Scaffold Major Full 2007-05-25 ASM15388v1 Washington University Genome Sequencing Center GCA_000153885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/885/GCF_000153885.1_ASM15388v1/ na assembly from type material na haploid bacteria 2870795 2869695 35.000000 0 27 38 NCBI RefSeq GCF_000153885.1-RS_2026_04_14 2026-04-14 2658 2528 84 na GCF_000153905.1 PRJNA224116 SAMN00627103 AAVO00000000.2 na 411459 40520 Blautia obeum ATCC 29174 strain=ATCC 29174 na latest Scaffold Major Full 2007-05-25 ASM15390v1 Washington University Genome Sequencing Center GCA_000153905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/905/GCF_000153905.1_ASM15390v1/ na assembly from type material na haploid bacteria 3625508 3624708 41.500000 0 54 62 NCBI RefSeq GCF_000153905.1-RS_2026_04_07 2026-04-07 3582 3356 61 na GCF_000153925.1 PRJNA224116 SAMN00627104 AAVP00000000.2 na 411460 33039 [Ruminococcus] torques ATCC 27756 strain=ATCC 27756 na latest Scaffold Major Full 2007-05-25 ASM15392v1 Washington University Genome Sequencing Center GCA_000153925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/925/GCF_000153925.1_ASM15392v1/ na assembly from type material na haploid bacteria 2741706 2739406 42.000000 0 41 64 NCBI RefSeq GCF_000153925.1-RS_2026_02_28 2026-02-28 2560 2382 90 na GCF_000153985.2 PRJNA224116 SAMN02435870 AAWF00000000.2 na 417398 666 Vibrio cholerae MZO-2 strain=MZO-2 na latest Scaffold Major Full 2015-07-23 ASM15398v3 Broad Institute GCA_000153985.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/153/985/GCF_000153985.2_ASM15398v3/ na na na haploid bacteria 3977246 3947824 47.500000 0 36 54 NCBI RefSeq GCF_000153985.2-RS_2026_01_21 2026-01-21 3651 3471 105 na GCF_000154005.2 PRJNA224116 SAMN02435871 AAWG00000000.2 na 417397 666 Vibrio cholerae 623-39 strain=623-39 na latest Scaffold Major Full 2015-08-05 Vibrio_cholerae_623-39_V1 Broad Institute GCA_000154005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/005/GCF_000154005.2_Vibrio_cholerae_623-39_V1/ na na na haploid bacteria 4164181 4060496 47.500000 0 39 80 NCBI RefSeq GCF_000154005.2-RS_2026_01_20 2026-01-20 3762 3606 94 na GCF_000154065.1 PRJNA224116 SAMN00627086 AAXB00000000.2 na 411462 88431 Dorea longicatena DSM 13814 strain=DSM 13814 na latest Scaffold Major Full 2007-05-25 ASM15406v1 Washington University Genome Sequencing Center GCA_000154065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/065/GCF_000154065.1_ASM15406v1/ na assembly from type material na haploid bacteria 2915433 2913833 41.500000 0 36 52 NCBI RefSeq GCF_000154065.1-RS_2026_02_27 2026-02-27 2827 2690 67 na GCF_000154085.1 PRJNA224116 SAMN00627056 AAXD00000000.2 na 411481 1680 Bifidobacterium adolescentis L2-32 strain=L2-32 na latest Scaffold Major Full 2007-05-25 ASM15408v1 Washington University Genome Sequencing Center GCA_000154085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/085/GCF_000154085.1_ASM15408v1/ na na na haploid bacteria 2389110 2385710 59.500000 0 40 74 NCBI RefSeq GCF_000154085.1-RS_2025_08_22 2025-08-22 2005 1893 78 na GCF_000154105.1 PRJNA224116 SAMN00627057 AAXE00000000.2 na 411477 46503 Parabacteroides merdae ATCC 43184 strain=ATCC 43184 na latest Scaffold Major Full 2007-05-25 ASM15410v1 Washington University Genome Sequencing Center GCA_000154105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/105/GCF_000154105.1_ASM15410v1/ na assembly from type material na haploid bacteria 4434377 4431877 45.500000 0 93 118 NCBI RefSeq GCF_000154105.1-RS_2025_12_23 2025-12-23 3681 3447 87 na GCF_000154125.1 PRJNA224116 SAMN00627058 AAXF00000000.2 na 411476 28116 Bacteroides ovatus ATCC 8483 strain=ATCC 8483 na latest Scaffold Major Full 2007-05-25 ASM15412v1 Washington University Genome Sequencing Center GCA_000154125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/125/GCF_000154125.1_ASM15412v1/ na assembly from type material na haploid bacteria 6465369 6463169 42.000000 0 32 54 NCBI RefSeq GCF_000154125.1-RS_2026_01_09 2026-01-09 4950 4735 95 na GCF_000154145.1 PRJNA224116 SAMN02595215 AAYD00000000.1 na 430556 263 Francisella tularensis subsp. holarctica FSC022 strain=FSC022 na latest Scaffold Major Full 2007-05-25 ASM15414v1 Broad Institute GCA_000154145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/145/GCF_000154145.1_ASM15414v1/ na na na haploid bacteria 1866493 1858527 32.000000 0 9 19 NCBI RefSeq GCF_000154145.1-RS_2026_01_30 2026-01-30 1936 1543 42 na GCF_000154165.1 PRJNA224116 SAMN02595216 AAYE00000000.1 na 430557 263 Francisella tularensis subsp. tularensis FSC033 strain=FSC033 na latest Scaffold Major Full 2007-05-25 ASM15416v1 Broad Institute GCA_000154165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/165/GCF_000154165.1_ASM15416v1/ na na na haploid bacteria 1851683 1844205 32.000000 0 8 15 NCBI RefSeq GCF_000154165.1-RS_2026_01_30 2026-01-30 1914 1686 35 na GCF_000154185.1 PRJNA224116 SAMN02595217 AAYF00000000.1 na 430558 263 Francisella tularensis subsp. novicida GA99-3549 strain=GA99-3549 na latest Scaffold Major Full 2007-05-25 ASM15418v1 Broad Institute GCA_000154185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/185/GCF_000154185.1_ASM15418v1/ na na na haploid bacteria 1901304 1897440 32.000000 0 9 15 NCBI RefSeq GCF_000154185.1-RS_2026_01_30 2026-01-30 1840 1738 40 na GCF_000154205.1 PRJNA224116 SAMN00627060 AAYH00000000.2 na 411479 820 Bacteroides uniformis ATCC 8492 strain=ATCC 8492 na latest Scaffold Major Full 2007-07-30 ASM15420v1 Washington University Genome Sequencing Center GCA_000154205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/205/GCF_000154205.1_ASM15420v1/ na assembly from type material na haploid bacteria 4719097 4717497 46.500000 0 33 49 NCBI RefSeq GCF_000154205.1-RS_2026_04_23 2026-04-23 3869 3685 70 na GCF_000154225.1 PRJNA224116 SAMN00627054 AAYI00000000.2 reference genome 411466 3050224 Schaalia dentiphila ATCC 17982 strain=ATCC 17982 na latest Scaffold Major Full 2007-05-25 ASM15422v1 Washington University Genome Sequencing Center GCA_000154225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/225/GCF_000154225.1_ASM15422v1/ na assembly from type material na haploid bacteria 2393958 2393758 65.500000 0 2 4 NCBI RefSeq GCF_000154225.1-RS_2026_06_09 2026-06-09 2080 2003 60 na GCF_000154245.1 PRJNA224116 SAMN02299417 AAYW00000000.2 na 411489 411489 Clostridium sp. L2-50 strain=L2-50 na latest Scaffold Major Full 2007-08-21 ASM15424v1 Washington University Genome Sequencing Center GCA_000154245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/245/GCF_000154245.1_ASM15424v1/ na na na haploid bacteria 2954616 2954116 41.500000 0 20 25 NCBI RefSeq GCF_000154245.1-RS_2025_09_30 2025-09-30 2680 2576 61 na GCF_000154265.1 PRJNA224116 SAMN02595218 ABAH00000000.1 na 442346 263 Francisella tularensis subsp. novicida GA99-3548 strain=GA99-3548 na latest Scaffold Major Full 2007-06-01 ASM15426v1 Broad Institute GCA_000154265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/265/GCF_000154265.1_ASM15426v1/ na na na haploid bacteria 1858641 1845491 32.500000 0 5 18 NCBI RefSeq GCF_000154265.1-RS_2026_01_30 2026-01-30 1798 1700 44 na GCF_000154285.1 PRJNA224116 SAMN00000734 ABAW00000000.2 reference genome 428127 31971 Amedibacillus dolichus DSM 3991 strain=DSM 3991 na latest Scaffold Major Full 2007-09-12 ASM15428v1 Washington University Genome Sequencing Center GCA_000154285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/285/GCF_000154285.1_ASM15428v1/ na assembly from type material na haploid bacteria 2191053 2190453 38.000000 0 19 25 NCBI RefSeq GCF_000154285.1-RS_2025_12_09 2025-12-09 2228 2153 51 na GCF_000154305.1 PRJNA224116 SAMN00627053 ABAX00000000.3 na 411490 105841 Anaerostipes caccae L1-92 strain=DSM 14662 na latest Scaffold Major Full 2007-11-14 ASM15430v1 Washington University Genome Sequencing Center GCA_000154305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/305/GCF_000154305.1_ASM15430v1/ na assembly from type material na haploid bacteria 3606936 3605636 44.500000 0 26 39 NCBI RefSeq GCF_000154305.1-RS_2026_02_28 2026-02-28 3571 3436 92 na GCF_000154365.1 PRJNA224116 SAMN00627070 ABCC00000000.2 na 411902 208479 Enterocloster bolteae ATCC BAA-613 strain=ATCC BAA-613 na latest Scaffold Major Full 2007-09-12 ASM15436v1 Washington University Genome Sequencing Center GCA_000154365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/365/GCF_000154365.1_ASM15436v1/ na assembly from type material na haploid bacteria 6557988 6556988 49.000000 0 68 78 NCBI RefSeq GCF_000154365.1-RS_2026_02_27 2026-02-27 6106 5926 74 na GCF_000154385.1 PRJNA224116 SAMN02299416 ABED00000000.2 reference genome 411485 853 Faecalibacterium prausnitzii M21/2 strain=M21/2 na latest Scaffold Major Full 2007-09-12 ASM15438v1 Washington University Genome Sequencing Center GCA_000154385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/385/GCF_000154385.1_ASM15438v1/ na na na haploid bacteria 3127383 3126983 56.000000 0 25 29 NCBI RefSeq GCF_000154385.1-RS_2026_04_14 2026-04-14 3027 2896 87 na GCF_000154405.1 PRJNA224116 SAMN00627099 ABEE00000000.2 na 411465 33033 Parvimonas micra ATCC 33270 strain=ATCC 33270 na latest Scaffold Major Full 2007-09-12 ASM15440v1 Washington University Genome Sequencing Center GCA_000154405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/405/GCF_000154405.1_ASM15440v1/ na assembly from type material na haploid bacteria 1703872 1703772 28.500000 0 16 17 NCBI RefSeq GCF_000154405.1-RS_2026_01_21 2026-01-21 1651 1592 46 na GCF_000154425.1 PRJNA224116 SAMN00627069 ABEY00000000.2 na 411474 33043 Coprococcus eutactus ATCC 27759 strain=ATCC 27759 na latest Scaffold Major Full 2007-09-18 ASM15442v1 Washington University Genome Sequencing Center GCA_000154425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/425/GCF_000154425.1_ASM15442v1/ na assembly from type material na haploid bacteria 3102987 3102087 43.000000 0 23 32 NCBI RefSeq GCF_000154425.1-RS_2026_02_27 2026-02-27 2734 2617 76 na GCF_000154445.1 PRJNA224116 SAMN02299419 ABEZ00000000.2 na 445973 261299 Intestinibacter bartlettii DSM 16795 strain=DSM 16795 na latest Scaffold Major Full 2007-11-01 ASM15444v1 Washington University Genome Sequencing Center GCA_000154445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/445/GCF_000154445.1_ASM15444v1/ na assembly from type material na haploid bacteria 2972256 2971856 29.000000 0 18 22 NCBI RefSeq GCF_000154445.1-RS_2026_02_27 2026-02-27 2809 2694 89 na GCF_000154465.1 PRJNA224116 SAMN00000002 ABFK00000000.2 reference genome 445970 28117 Alistipes putredinis DSM 17216 strain=DSM 17216 na latest Scaffold Major Full 2007-11-01 ASM15446v1 Washington University Genome Sequencing Center GCA_000154465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/465/GCF_000154465.1_ASM15446v1/ na assembly from type material na haploid bacteria 2550678 2549878 53.500000 0 12 20 NCBI RefSeq GCF_000154465.1-RS_2026_03_31 2026-03-31 2346 2248 61 na GCF_000154485.1 PRJNA224116 SAMN00000007 ABFX00000000.2 na 445974 1547 Thomasclavelia ramosa DSM 1402 strain=DSM 1402 na latest Scaffold Major Full 2007-11-14 ASM15448v1 Washington University Genome Sequencing Center GCA_000154485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/485/GCF_000154485.1_ASM15448v1/ na assembly from type material na haploid bacteria 3235195 3234795 31.500000 0 12 16 NCBI RefSeq GCF_000154485.1-RS_2026_03_03 2026-03-03 3149 3065 55 na GCF_000154505.1 PRJNA224116 SAMN00627066 ABFY00000000.2 na 411468 29347 [Clostridium] scindens ATCC 35704 strain=ATCC 35704 na latest Scaffold Major Full 2007-11-14 ASM15450v1 Washington University Genome Sequencing Center GCA_000154505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/505/GCF_000154505.1_ASM15450v1/ na assembly from type material na haploid bacteria 3622605 3619905 46.500000 0 41 68 NCBI RefSeq GCF_000154505.1-RS_2026_02_27 2026-02-27 3740 3537 89 na GCF_000154525.1 PRJNA224116 SAMN00000004 ABFZ00000000.2 reference genome 449673 46506 Bacteroides stercoris ATCC 43183 strain=ATCC 43183 na latest Scaffold Major Full 2007-11-14 ASM15452v1 Washington University Genome Sequencing Center GCA_000154525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/525/GCF_000154525.1_ASM15452v1/ na assembly from type material na haploid bacteria 4009829 4009229 46.000000 0 17 23 NCBI RefSeq GCF_000154525.1-RS_2026_06_11 2026-06-11 3396 3242 74 na GCF_000154565.1 PRJNA224116 SAMN00000003 ABGD00000000.2 na 445972 169435 Anaerotruncus colihominis DSM 17241 strain=DSM 17241 na latest Scaffold Major Full 2007-11-16 ASM15456v1 Washington University Genome Sequencing Center GCA_000154565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/565/GCF_000154565.1_ASM15456v1/ na assembly from type material na haploid bacteria 3719688 3718888 54.000000 0 28 36 NCBI RefSeq GCF_000154565.1-RS_2026_04_14 2026-04-14 3731 3604 75 na GCF_000154585.2 PRJNA224116 SAMN03081422 na na 478433 1773 Mycobacterium tuberculosis KZN 4207 strain=KZN 4207 na latest Complete Genome Major Full 2011-04-07 ASM15458v2 Broad Institute GCA_000154585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/585/GCF_000154585.2_ASM15458v2/ na na na haploid bacteria 4394985 4394985 65.500000 1 1 1 NCBI RefSeq GCF_000154585.2-RS_2025_06_29 2025-06-29 4146 3913 51 na GCF_000154605.2 PRJNA224116 SAMN00103288 na na 478435 1773 Mycobacterium tuberculosis KZN 605 strain=KZN XDR na latest Complete Genome Major Full 2012-06-19 ASM15460v2 The Broad Institute Genome Sequencing Platform GCA_000154605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/605/GCF_000154605.2_ASM15460v2/ na na na haploid bacteria 4399120 4399120 65.500000 1 1 1 NCBI RefSeq GCF_000154605.2-RS_2025_06_28 2025-06-28 4149 3898 51 na GCF_000154625.1 PRJNA224116 SAMN02470541 ABHD00000000.2 na 479831 1496 Clostridioides difficile QCD-63q42 na QCD-63q42 latest Chromosome Major Full 2009-01-08 ASM15462v1 McGill University GCA_000154625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/625/GCF_000154625.1_ASM15462v1/ na na na haploid bacteria 4443737 4440437 28.500000 1 28 60 NCBI RefSeq GCF_000154625.1-RS_2026_03_04 2026-03-04 4218 4081 60 na GCF_000154645.1 PRJNA224116 SAMN02470539 ABHE00000000.2 na 479832 1496 Clostridioides difficile QCD-76w55 na QCD-76w55 latest Chromosome Major Full 2009-01-22 ASM15464v1 McGill University GCA_000154645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/645/GCF_000154645.1_ASM15464v1/ na na na haploid bacteria 4396895 4392595 28.000000 1 24 66 NCBI RefSeq GCF_000154645.1-RS_2026_02_28 2026-02-28 4040 3944 44 na GCF_000154665.1 PRJNA224116 SAMN02470532 ABHF00000000.2 na 479833 1496 Clostridioides difficile QCD-97b34 na QCD-97b34 latest Chromosome Major Full 2009-01-22 ASM15466v1 McGill University GCA_000154665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/665/GCF_000154665.1_ASM15466v1/ na na na haploid bacteria 4063610 4059010 28.500000 1 15 60 NCBI RefSeq GCF_000154665.1-RS_2026_02_28 2026-02-28 3732 3644 44 na GCF_000154685.1 PRJNA224116 SAMN02470533 ABHG00000000.2 na 479834 1496 Clostridioides difficile QCD-37x79 na QCD-37x79 latest Chromosome Major Full 2009-01-22 cdqaf McGill University GCA_000154685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/685/GCF_000154685.1_cdqaf/ na na na haploid bacteria 4332988 4329888 28.500000 1 15 45 NCBI RefSeq GCF_000154685.1-RS_2026_03_01 2026-03-01 4076 3961 46 na GCF_000154705.2 PRJNA224116 SAMN02436119 ABIA00000000.3 reference genome 411684 244596 Hoeflea phototrophica DFL-43 strain=DFL-43 na latest Chromosome Major Full 2014-09-24 ASM15470v2 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000154705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/705/GCF_000154705.2_ASM15470v2/ na assembly from type material na haploid bacteria 4468465 4467792 60.000000 1 1 5 NCBI RefSeq GCF_000154705.2-RS_2026_04_30 2026-04-30 4231 4122 57 na GCF_000154725.1 PRJNA224116 SAMN02436147 ABIB00000000.1 reference genome 391587 221066 Kordia algicida OT-1 strain=OT-1 na latest Scaffold Major Full 2007-11-30 ASM15472v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000154725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/725/GCF_000154725.1_ASM15472v1/ na assembly from type material na haploid bacteria 5033129 5019836 34.500000 0 1 34 NCBI RefSeq GCF_000154725.1-RS_2025_12_11 2025-12-11 4423 4330 74 21622754 GCF_000154745.2 PRJNA224116 SAMN02603622 na na 383629 221822 Phaeobacter inhibens 2.10 strain=2.1 na latest Complete Genome Major Full 2012-07-31 ASM15474v2 Moore Foundation GCA_000154745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/745/GCF_000154745.2_ASM15474v2/ na na na haploid bacteria 4160918 4160918 60.000000 4 4 4 NCBI RefSeq GCF_000154745.2-RS_2025_07_24 2025-07-24 3925 3825 73 22717884 GCF_000154765.2 PRJNA224116 SAMN02603623 na na 391619 221822 Phaeobacter inhibens DSM 17395 strain=DSM 17395 na latest Complete Genome Major Full 2012-07-31 ASM15476v2 Moore Foundation GCA_000154765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/765/GCF_000154765.2_ASM15476v2/ na na na haploid bacteria 4227134 4227134 60.000000 4 4 4 NCBI RefSeq GCF_000154765.2-RS_2025_07_24 2025-07-24 3993 3889 73 22717884 GCF_000154785.2 PRJNA224116 SAMN02603624 na reference genome 391595 42443 Roseobacter litoralis Och 149 strain=Och 149 na latest Complete Genome Major Full 2011-06-28 ASM15478v2 Moore Foundation GCA_000154785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/785/GCF_000154785.2_ASM15478v2/ na assembly from type material na haploid bacteria 4745450 4745450 57.000000 4 4 4 NCBI RefSeq GCF_000154785.2-RS_2026_05_01 2026-05-01 4560 4403 44 21693016 GCF_000154805.1 PRJNA224116 SAMN00627073 ABIK00000000.2 na 428126 29348 Thomasclavelia spiroformis DSM 1552 strain=DSM 1552 na latest Scaffold Major Full 2008-02-12 ASM15480v1 Washington University Genome Sequencing Center GCA_000154805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/805/GCF_000154805.1_ASM15480v1/ na assembly from type material na haploid bacteria 2507885 2507485 28.500000 0 12 16 NCBI RefSeq GCF_000154805.1-RS_2026_03_03 2026-03-03 2420 2307 74 na GCF_000154825.1 PRJNA224116 SAMN02299418 ABIL00000000.2 reference genome 445971 214853 Anaerofustis stercorihominis DSM 17244 strain=DSM 17244 na latest Scaffold Major Full 2008-01-24 ASM15482v1 Washington University Genome Sequencing Center GCA_000154825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/825/GCF_000154825.1_ASM15482v1/ na assembly from type material na haploid bacteria 2284703 2284603 33.500000 0 5 6 NCBI RefSeq GCF_000154825.1-RS_2026_01_26 2026-01-26 2290 2220 53 na GCF_000154845.1 PRJNA224116 SAMN00000014 ABIY00000000.2 na 470145 310298 Phocaeicola coprocola DSM 17136 strain=DSM 17136 na latest Scaffold Major Full 2008-04-21 ASM15484v1 Washington University Genome Sequencing Center GCA_000154845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/845/GCF_000154845.1_ASM15484v1/ na assembly from type material na haploid bacteria 4300117 4295617 42.000000 0 90 135 NCBI RefSeq GCF_000154845.1-RS_2026_01_08 2026-01-08 3869 3520 115 na GCF_000154865.1 PRJNA224116 SAMN00000020 ABJD00000000.2 na 471874 588 Providencia stuartii ATCC 25827 strain=ATCC 25827 na latest Scaffold Major Full 2008-04-10 ASM15486v1 Washington University Genome Sequencing Center GCA_000154865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/865/GCF_000154865.1_ASM15486v1/ na na na haploid bacteria 4610361 4603561 41.500000 0 52 120 NCBI RefSeq GCF_000154865.1-RS_2026_03_11 2026-03-11 4415 4145 110 na GCF_000154885.1 PRJNA224116 SAMN02595219 ABJF00000000.1 na 465541 465541 Streptomyces sp. Mg1 strain=Mg1 na latest Scaffold Major Full 2008-03-04 ASM15488v1 Broad Institute GCA_000154885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/885/GCF_000154885.1_ASM15488v1/ na na na haploid bacteria 7260368 7105723 71.000000 0 127 466 NCBI RefSeq GCF_000154885.1-RS_2025_03_25 2025-03-25 6724 6154 68 na GCF_000154905.1 PRJNA224116 SAMN02595220 ABJG00000000.2 na 465543 465543 Streptomyces sp. SPB074 strain=SPB074 na latest Scaffold Major Full 2010-05-06 ASM15490v1 Broad Institute GCA_000154905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/905/GCF_000154905.1_ASM15490v1/ na na na haploid bacteria 6970553 6505970 73.000000 0 2 845 NCBI RefSeq GCF_000154905.1-RS_2025_03_25 2025-03-25 6142 5452 72 na GCF_000154945.1 PRJNA224116 SAMN02595222 ABJI00000000.2 na 457429 38300 Streptomyces pristinaespiralis ATCC 25486 strain=ATCC 25486 na latest Chromosome Major Full 2010-05-28 ASM15494v1 Broad Institute GCA_000154945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/945/GCF_000154945.1_ASM15494v1/ na na na haploid bacteria 8133379 7633609 71.000000 1 1 844 NCBI RefSeq GCF_000154945.1-RS_2026_01_15 2026-01-15 7212 6582 73 na GCF_000154965.1 PRJNA224116 SAMN02595223 ABJJ00000000.2 reference genome 463191 285530 Streptomyces sviceus ATCC 29083 strain=ATCC 29083 na latest Chromosome Major Full 2010-05-28 ASM15496v1 Broad Institute GCA_000154965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/965/GCF_000154965.1_ASM15496v1/ na na na haploid bacteria 9313494 9055790 70.500000 1 1 552 NCBI RefSeq GCF_000154965.1-RS_2026_04_29 2026-04-29 8641 7899 75 na GCF_000154985.1 PRJNA224116 SAMN00000017 ABJK00000000.2 na 471872 102684 Streptococcus infantarius subsp. infantarius ATCC BAA-102 strain=ATCC BAA-102 na latest Scaffold Major Full 2008-03-18 ASM15498v1 Washington University Genome Sequencing Center GCA_000154985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/154/985/GCF_000154985.1_ASM15498v1/ na assembly from type material na haploid bacteria 1925187 1925087 37.500000 0 21 22 NCBI RefSeq GCF_000154985.1-RS_2026_02_08 2026-02-08 1998 1811 63 na GCF_000155025.1 PRJNA224116 SAMN02470534 ABKJ00000000.2 na 499175 1496 Clostridioides difficile ATCC 43255 strain=ATCC 43255 na latest Chromosome Major Full 2008-12-10 cduab McGill University GCA_000155025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/025/GCF_000155025.1_cduab/ na na na haploid bacteria 4206980 4204780 28.500000 1 34 55 NCBI RefSeq GCF_000155025.1-RS_2026_03_03 2026-03-03 3948 3824 59 na GCF_000155045.1 PRJNA224116 SAMN02470535 ABKK00000000.2 na 499176 1496 Clostridioides difficile CIP 107932 strain=CIP 107932 na latest Chromosome Major Full 2009-01-22 cdeaa McGill University and Genome Quebec GCA_000155045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/045/GCF_000155045.1_cdeaa/ na na na haploid bacteria 4036680 4032580 28.500000 1 15 55 NCBI RefSeq GCF_000155045.1-RS_2026_03_07 2026-03-07 3734 3599 49 na GCF_000155065.1 PRJNA224116 SAMN02470540 ABKL00000000.2 na 499174 1496 Clostridioides difficile QCD-23m63 strain=QCD-23m63 na latest Chromosome Major Full 2009-01-22 ASM15506v1 McGill University GCA_000155065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/065/GCF_000155065.1_ASM15506v1/ na na na haploid bacteria 3940285 3936085 28.500000 1 20 61 NCBI RefSeq GCF_000155065.1-RS_2026_03_07 2026-03-07 3644 3495 33 na GCF_000155085.1 PRJNA224116 SAMN00000018 ABKW00000000.2 na 471871 1509 Clostridium sporogenes ATCC 15579 strain=ATCC 15579 na latest Scaffold Major Full 2008-04-21 ASM15508v1 Washington University Genome Sequencing Center GCA_000155085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/085/GCF_000155085.1_ASM15508v1/ na na na haploid bacteria 4102325 4102125 28.000000 0 2 4 NCBI RefSeq GCF_000155085.1-RS_2025_06_05 2025-06-05 3817 3652 108 na GCF_000155105.1 PRJNA224116 SAMN02436276 ABKX00000000.1 na 502347 208962 Escherichia albertii TW07627 strain=TW07627 na latest Scaffold Major Full 2008-03-12 ASM15510v1 J Craig Venter Institute GCA_000155105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/105/GCF_000155105.1_ASM15510v1/ na na na haploid bacteria 4746590 4698533 50.000000 0 43 64 NCBI RefSeq GCF_000155105.1-RS_2026_04_24 2026-04-24 4780 4240 103 na GCF_000155125.1 PRJNA224116 SAMN02436234 ABKY00000000.2 na 502346 562 Escherichia coli O157:H7 str. TW14588 strain=TW14588 na latest Chromosome Major Full 2009-02-19 ASM15512v1 J Craig Venter Institute GCA_000155125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/125/GCF_000155125.1_ASM15512v1/ na na na haploid bacteria 5671197 5670297 50.500000 2 2 10 NCBI RefSeq GCF_000155125.1-RS_2025_06_13 2025-06-13 5738 5257 131 na GCF_000155205.1 PRJNA224116 SAMN00000022 ABOU00000000.2 na 471875 46228 [Ruminococcus] lactaris ATCC 29176 strain=ATCC 29176 na latest Scaffold Major Full 2008-08-28 ASM15520v1 Washington University Genome Sequencing Center GCA_000155205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/205/GCF_000155205.1_ASM15520v1/ na assembly from type material na haploid bacteria 2731235 2729735 42.500000 0 47 62 NCBI RefSeq GCF_000155205.1-RS_2026_02_27 2026-02-27 2591 2445 71 na GCF_000155355.1 PRJNA224116 SAMN02469326 ABQM00000000.1 na 535025 1423 Bacillus subtilis subsp. subtilis str. JH642 strain=JH642 na latest Chromosome Major Full 2008-08-12 ASM15535v1 Baylor College of Medicine GCA_000155355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/355/GCF_000155355.1_ASM15535v1/ na na na haploid bacteria 4187615 4187329 43.500000 1 1 9 NCBI RefSeq GCF_000155355.1-RS_2025_05_22 2025-05-22 4428 4122 121 18670626 GCF_000155375.1 PRJNA224116 SAMN02469322 ABQN00000000.1 na 535024 1423 Bacillus subtilis subsp. subtilis str. SMY strain=SMY na latest Chromosome Major Full 2008-08-12 ASM15537v1 Baylor College of Medicine GCA_000155375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/375/GCF_000155375.1_ASM15537v1/ na na na haploid bacteria 4214643 4214371 43.500000 1 1 9 NCBI RefSeq GCF_000155375.1-RS_2025_05_22 2025-05-22 4442 4125 120 18670626 GCF_000155395.1 PRJNA224116 SAMN02463676 ABQP00000000.1 na 398513 1681 Bifidobacterium bifidum NCIMB 41171 strain=NCIMB 41171 na latest Scaffold Major Full 2008-08-28 ASM15539v1 Broad Institute GCA_000155395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/395/GCF_000155395.1_ASM15539v1/ na na na haploid bacteria 2202695 2186140 63.000000 0 9 33 NCBI RefSeq GCF_000155395.1-RS_2026_01_30 2026-01-30 1878 1748 59 na GCF_000155415.1 PRJNA224116 SAMN02463677 ABQQ00000000.1 na 537937 216816 Bifidobacterium longum subsp. infantis CCUG 52486 strain=CCUG 52486 na latest Scaffold Major Full 2008-08-28 ASM15541v1 Broad Institute GCA_000155415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/415/GCF_000155415.1_ASM15541v1/ na na na haploid bacteria 2480850 2453376 60.000000 0 22 55 NCBI RefSeq GCF_000155415.1-RS_2026_01_30 2026-01-30 2168 2041 63 na GCF_000155455.1 PRJNA224116 SAMN02463679 ABQS00000000.1 na 537970 123841 Helicobacter canadensis MIT 98-5491 strain=MIT 98-5491 na latest Scaffold Major Full 2008-08-28 ASM15545v1 Broad Institute GCA_000155455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/455/GCF_000155455.1_ASM15545v1/ na assembly from type material na haploid bacteria 1633489 1605969 33.500000 0 23 126 NCBI RefSeq GCF_000155455.1-RS_2026_02_08 2026-02-08 1688 1587 43 25212613 GCF_000155475.1 PRJNA224116 SAMN02463680 ABQT00000000.1 na 537971 213 Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 strain=CCUG 18818 na latest Scaffold Major Full 2008-08-28 ASM15547v1 Broad Institute GCA_000155475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/475/GCF_000155475.1_ASM15547v1/ na assembly from type material na haploid bacteria 2214470 2182709 38.500000 0 50 96 NCBI RefSeq GCF_000155475.1-RS_2026_01_21 2026-01-21 2389 2279 44 25212613 GCF_000155495.1 PRJNA224116 SAMN02463681 ABQU00000000.1 na 537972 35818 Helicobacter pullorum MIT 98-5489 strain=MIT 98-5489 na latest Scaffold Major Full 2008-08-28 ASM15549v1 Broad Institute GCA_000155495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/495/GCF_000155495.1_ASM15549v1/ na na na haploid bacteria 1951667 1919070 34.000000 0 44 131 NCBI RefSeq GCF_000155495.1-RS_2026_01_26 2026-01-26 2037 1938 43 25212613 GCF_000155515.2 PRJNA224116 SAMN02463682 na reference genome 537973 1597 Lacticaseibacillus paracasei subsp. paracasei 8700:2 strain=362.5013889 na latest Complete Genome Major Full 2013-08-21 ASM15551v2 Broad Institute GCA_000155515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/515/GCF_000155515.2_ASM15551v2/ na na na haploid bacteria 3025352 3025352 46.500000 3 3 3 NCBI RefSeq GCF_000155515.2-RS_2025_11_23 2025-11-23 2954 2808 77 na GCF_000155535.1 PRJNA224116 SAMN02595231 ABRI00000000.1 na 543737 263 Francisella tularensis subsp. tularensis MA00-2987 strain=MA00-2987 na latest Scaffold Major Full 2008-08-28 ASM15553v1 Broad Institute GCA_000155535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/535/GCF_000155535.1_ASM15553v1/ na na na haploid bacteria 1871868 1868750 32.000000 0 19 33 NCBI RefSeq GCF_000155535.1-RS_2026_01_30 2026-01-30 1968 1655 36 na GCF_000155555.1 PRJNA224116 SAMN02436227 ABRS00000000.1 reference genome 118168 64178 Coleofasciculus chthonoplastes PCC 7420 strain=PCC 7420 na latest Scaffold Major Full 2008-08-15 ASM15555v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000155555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/555/GCF_000155555.1_ASM15555v1/ na assembly from type material na haploid bacteria 8679041 8651623 45.500000 0 57 142 NCBI RefSeq GCF_000155555.1-RS_2025_11_20 2025-11-20 7294 6905 69 na GCF_000155575.1 PRJNA224116 SAMN02436274 ABRU00000000.1 na 391600 391600 Brevundimonas sp. BAL3 strain=BAL3 na latest Scaffold Major Full 2008-08-15 ASM15557v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000155575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/575/GCF_000155575.1_ASM15557v1/ na na na haploid bacteria 3646072 3636020 67.500000 0 6 63 NCBI RefSeq GCF_000155575.1-RS_2024_08_13 2024-08-13 3607 3513 61 na GCF_000155595.1 PRJNA224116 SAMN02436177 ABRV00000000.1 na 91464 91464 Synechococcus sp. PCC 7335 strain=PCC 7335 na latest Scaffold Major Full 2008-08-15 ASM15559v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000155595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/595/GCF_000155595.1_ASM15559v1/ na na na haploid bacteria 5973558 5964106 48.000000 0 11 38 NCBI RefSeq GCF_000155595.1-RS_2024_08_13 2024-08-13 5223 5094 45 na GCF_000155615.1 PRJNA224116 SAMN02436178 ABRW00000000.1 na 236097 236097 Alcanivorax sp. DG881 strain=DG881 na latest Scaffold Major Full 2008-08-15 ASM15561v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000155615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/615/GCF_000155615.1_ASM15561v1/ na na na haploid bacteria 3804728 3789834 58.000000 0 4 70 NCBI RefSeq GCF_000155615.1-RS_2024_08_12 2024-08-12 3461 3392 52 na GCF_000155635.1 PRJNA224116 SAMN02436316 ABSE00000000.1 na 180281 180281 Cyanobium sp. PCC 7001 strain=PCC 7001 na latest Scaffold Major Full 2008-08-29 ASM15563v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000155635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/635/GCF_000155635.1_ASM15563v1/ na na na haploid bacteria 2834252 2832697 68.500000 0 2 18 NCBI RefSeq GCF_000155635.1-RS_2024_08_12 2024-08-12 2887 2799 56 na GCF_000155655.1 PRJNA224116 SAMN02436179 ABSG00000000.1 na 473788 1229 Nitrosococcus oceani AFC27 strain=AFC27 na latest Scaffold Major Full 2008-09-29 ASM15565v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000155655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/655/GCF_000155655.1_ASM15565v1/ na na na haploid bacteria 3480059 3471807 50.500000 0 12 49 NCBI RefSeq GCF_000155655.1-RS_2025_08_21 2025-08-21 3334 3213 54 na GCF_000155675.2 PRJNA224116 SAMN02603621 na reference genome 391626 1217908 Octadecabacter antarcticus 307 strain=307 na latest Complete Genome Major Full 2013-04-08 ASM15567v2 Moore Foundation GCA_000155675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/675/GCF_000155675.2_ASM15567v2/ na assembly from type material na haploid bacteria 4875481 4875481 54.500000 2 2 2 NCBI RefSeq GCF_000155675.2-RS_2025_12_13 2025-12-13 5093 4504 54 23671678 GCF_000155735.2 PRJNA224116 SAMN02603620 na reference genome 391616 53946 Octadecabacter arcticus 238 strain=238 na latest Complete Genome Major Full 2013-04-08 ASM15573v2 Moore Foundation GCA_000155735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/735/GCF_000155735.2_ASM15573v2/ na assembly from type material na haploid bacteria 5478249 5478249 55.000000 3 3 3 NCBI RefSeq GCF_000155735.2-RS_2026_03_30 2026-03-30 5729 4993 52 23671678 GCF_000155755.1 PRJNA224116 SAMN02469397 ABSS00000000.1 na 545422 263 Francisella tularensis subsp. novicida FTE strain=FTE M3 latest Scaffold Major Full 2008-07-25 FTE_ASSEMBLY BioHealthBase GCA_000155755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/755/GCF_000155755.1_FTE_ASSEMBLY/ na na na haploid bacteria 1888872 1888472 32.500000 0 4 8 NCBI RefSeq GCF_000155755.1-RS_2026_01_30 2026-01-30 1823 1754 44 na GCF_000155775.1 PRJNA224116 SAMN02436144 ABST00000000.1 na 455436 455436 Glaciecola sp. HTCC2999 strain=HTCC2999 na latest Scaffold Major Full 2008-07-23 ASM15577v1 J. Craig Venter Institute GCA_000155775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/775/GCF_000155775.1_ASM15577v1/ na na na haploid bacteria 2560882 2523039 40.500000 0 11 56 NCBI RefSeq GCF_000155775.1-RS_2024_08_13 2024-08-13 2259 2164 49 na GCF_000155815.1 PRJNA224116 SAMN00000667 ABVO00000000.1 na 483216 28111 Bacteroides eggerthii DSM 20697 strain=DSM 20697 na latest Scaffold Major Full 2008-10-09 ASM15581v1 Washington University Genome Sequencing Center GCA_000155815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/815/GCF_000155815.1_ASM15581v1/ na assembly from type material na haploid bacteria 4197635 4157980 44.500000 0 20 70 NCBI RefSeq GCF_000155815.1-RS_2026_01_08 2026-01-08 3445 3334 61 na GCF_000155895.1 PRJNA224116 SAMN02436224 ABVS00000000.1 na 439493 439493 Candidatus Pelagibacter sp. HTCC7211 strain=HTCC7211 na latest Scaffold Major Full 2008-09-29 ASM15589v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000155895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/895/GCF_000155895.1_ASM15589v1/ na na na haploid bacteria 1456888 1456888 29.000000 0 1 1 NCBI RefSeq GCF_000155895.1-RS_2024_03_31 2024-03-31 1574 1536 36 na GCF_000155955.1 PRJNA224116 SAMN00000736 ABWK00000000.2 reference genome 500635 52226 Mitsuokella multacida DSM 20544 strain=DSM 20544 na latest Scaffold Major Full 2009-07-22 ASM15595v1 Washington University Genome Sequencing Center GCA_000155955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/955/GCF_000155955.1_ASM15595v1/ na assembly from heterotypic synonym type material na haploid bacteria 2577056 2574556 58.000000 0 6 31 NCBI RefSeq GCF_000155955.1-RS_2026_04_07 2026-04-07 2428 2325 92 na GCF_000155975.1 PRJNA224116 SAMN02415622 ABWL00000000.2 na 500640 133448 Citrobacter youngae ATCC 29220 strain=ATCC 29220 na latest Scaffold Major Full 2010-01-08 ASM15597v1 Washington University Genome Sequencing Center GCA_000155975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/975/GCF_000155975.1_ASM15597v1/ na na na haploid bacteria 5154159 5150259 52.500000 0 10 49 NCBI RefSeq GCF_000155975.1-RS_2025_05_09 2025-05-09 4843 4648 102 na GCF_000155995.1 PRJNA224116 SAMN00000733 ABWM00000000.2 na 500639 69218 Enterobacter cancerogenus ATCC 35316 strain=ATCC 35316 na latest Scaffold Major Full 2009-10-08 ASM15599v1 Washington University Genome Sequencing Center GCA_000155995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/995/GCF_000155995.1_ASM15599v1/ na na na haploid bacteria 4638653 4633453 56.000000 0 10 62 NCBI RefSeq GCF_000155995.1-RS_2025_12_10 2025-12-10 4427 4276 104 na GCF_000156015.1 PRJNA224116 SAMN00008799 ABWN00000000.1 na 511680 45851 Eshraghiella crossota DSM 2876 strain=DSM 2876 na latest Scaffold Major Full 2009-04-09 ASM15601v1 Washington University Genome Sequencing Center GCA_000156015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/015/GCF_000156015.1_ASM15601v1/ na assembly from type material na haploid bacteria 2496039 2482791 37.500000 0 31 51 NCBI RefSeq GCF_000156015.1-RS_2025_09_22 2025-09-22 2501 2400 58 na GCF_000156055.1 PRJNA224116 SAMN00000729 ABWP00000000.1 na 500633 89152 Peptacetobacter hiranonis DSM 13275 strain=DSM 13275 na latest Scaffold Major Full 2008-10-14 ASM15605v1 Washington University Genome Sequencing Center GCA_000156055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/055/GCF_000156055.1_ASM15605v1/ na assembly from type material na haploid bacteria 2479772 2423348 31.000000 0 26 101 NCBI RefSeq GCF_000156055.1-RS_2026_02_27 2026-02-27 2237 2193 36 na GCF_000156075.1 PRJNA224116 SAMN00000029 ABWZ00000000.1 na 483217 357276 Phocaeicola dorei DSM 17855 strain=DSM 17855 na latest Scaffold Major Full 2008-10-09 ASM15607v1 Washington University Genome Sequencing Center GCA_000156075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/075/GCF_000156075.1_ASM15607v1/ na assembly from type material na haploid bacteria 5566217 5487751 42.000000 0 40 122 NCBI RefSeq GCF_000156075.1-RS_2026_01_08 2026-01-08 4541 4326 73 na GCF_000156095.1 PRJNA224116 SAMN02436272 ABXD00000000.1 na 929558 1176482 Sulfurimonas gotlandica GD1 strain=GD 1 na latest Scaffold Major Full 2008-09-29 ASM15609v1 Moore Foundation GCA_000156095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/095/GCF_000156095.1_ASM15609v1/ na assembly from type material na haploid bacteria 2946312 2939048 33.500000 0 12 26 NCBI RefSeq GCF_000156095.1-RS_2025_12_02 2025-12-02 2929 2841 64 na GCF_000156175.1 PRJNA224116 SAMN00008813 ABXH00000000.2 na 521003 147207 Collinsella intestinalis DSM 13280 strain=DSM 13280 na latest Scaffold Major Full 2009-06-22 ASM15617v1 Washington University Genome Sequencing Center GCA_000156175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/175/GCF_000156175.1_ASM15617v1/ na assembly from type material na haploid bacteria 1809497 1804297 62.500000 0 3 55 NCBI RefSeq GCF_000156175.1-RS_2026_01_15 2026-01-15 1635 1559 64 na GCF_000156195.1 PRJNA224116 SAMN00008774 ABXI00000000.2 reference genome 483215 338188 Bacteroides finegoldii DSM 17565 strain=DSM 17565 na latest Scaffold Major Full 2009-06-17 ASM15619v1 Washington University Genome Sequencing Center GCA_000156195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/195/GCF_000156195.1_ASM15619v1/ na assembly from type material na haploid bacteria 4892401 4881901 43.000000 0 33 138 NCBI RefSeq GCF_000156195.1-RS_2025_11_21 2025-11-21 4171 3865 72 na GCF_000156215.1 PRJNA224116 SAMN00008814 ABXJ00000000.1 na 445975 147206 Collinsella stercoris DSM 13279 strain=DSM 13279 na latest Scaffold Major Full 2008-10-09 ASM15621v1 Washington University Genome Sequencing Center GCA_000156215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/215/GCF_000156215.1_ASM15621v1/ na assembly from type material na haploid bacteria 2475429 2399821 63.000000 0 35 177 NCBI RefSeq GCF_000156215.1-RS_2026_02_14 2026-02-14 2147 2037 58 na GCF_000156235.1 PRJNA224116 SAMN02436269 ABXL00000000.1 na 439495 439495 Pseudovibrio sp. JE062 strain=JE062 na latest Scaffold Major Full 2008-11-05 ASM15623v1 Moore Foundation GCA_000156235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/235/GCF_000156235.1_ASM15623v1/ na na na haploid bacteria 5726521 5717078 52.500000 0 19 53 NCBI RefSeq GCF_000156235.1-RS_2024_08_22 2024-08-22 5159 5009 124 na GCF_000156275.2 PRJNA224116 SAMN02436270 ABXP00000000.2 na 391606 911092 Caldanaerobacter subterraneus subsp. pacificus DSM 12653 strain=DSM 12653 na latest Contig Major Full 2015-04-09 ASM15627v2 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000156275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/275/GCF_000156275.2_ASM15627v2/ na assembly from type material na haploid bacteria 2391417 2391417 37.500000 0 135 135 NCBI RefSeq GCF_000156275.2-RS_2026_03_31 2026-03-31 2478 2222 72 26446804 GCF_000156335.1 PRJNA224116 SAMN02436271 ABXS00000000.1 na 391589 391589 Roseobacter sp. GAI101 strain=GAI101 na latest Scaffold Major Full 2008-11-25 ASM15633v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000156335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/335/GCF_000156335.1_ASM15633v1/ na na na haploid bacteria 4527951 4514062 58.500000 0 9 67 NCBI RefSeq GCF_000156335.1-RS_2025_08_18 2025-08-18 4289 4140 62 na GCF_000156355.1 PRJNA224116 SAMN02436314 ABXT00000000.1 reference genome 637616 392484 Methylophaga thiooxydans DMS010 strain=DMS010 na latest Scaffold Major Full 2009-03-02 ASM15635v1 Moore Foundation GCA_000156355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/355/GCF_000156355.1_ASM15635v1/ na assembly from type material na haploid bacteria 3047652 3018159 46.000000 0 26 43 NCBI RefSeq GCF_000156355.1-RS_2025_12_02 2025-12-02 3201 3135 49 21478352 GCF_000156375.1 PRJNA224116 SAMN00008819 ABXU00000000.1 na 411464 901 Desulfovibrio piger ATCC 29098 strain=ATCC 29098 na latest Scaffold Major Full 2008-10-30 ASM15637v1 Washington University Genome Sequencing Center GCA_000156375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/375/GCF_000156375.1_ASM15637v1/ na assembly from type material na haploid bacteria 2867216 2826240 63.000000 0 47 127 NCBI RefSeq GCF_000156375.1-RS_2026_04_07 2026-04-07 2622 2512 78 na GCF_000156395.1 PRJNA224116 SAMN00008855 ABXV00000000.2 na 500637 158850 Providencia rustigianii DSM 4541 strain=DSM 4541 na latest Scaffold Major Full 2009-10-02 ASM15639v1 Washington University Genome Sequencing Center GCA_000156395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/395/GCF_000156395.1_ASM15639v1/ na assembly from type material na haploid bacteria 3978644 3965844 41.000000 0 35 163 NCBI RefSeq GCF_000156395.1-RS_2026_03_11 2026-03-11 3835 3644 100 na GCF_000156415.1 PRJNA224116 SAMN02469396 ABXZ00000000.1 na 563990 263 Francisella tularensis subsp. novicida FTG strain=FTG na latest Scaffold Major Full 2008-10-09 ASM15641v1 BioHealthBase GCA_000156415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/415/GCF_000156415.1_ASM15641v1/ na na na haploid bacteria 1844228 1843928 32.500000 0 5 8 NCBI RefSeq GCF_000156415.1-RS_2026_01_30 2026-01-30 1797 1732 45 na GCF_000156435.1 PRJNA224116 SAMN02595233 ABYA00000000.1 na 566461 67581 Streptomyces viridosporus ATCC 14672 strain=ATCC 14672 na latest Scaffold Major Full 2009-01-27 ASM15643v1 Broad Institute GCA_000156435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/435/GCF_000156435.1_ASM15643v1/ na assembly from heterotypic synonym type material na haploid bacteria 8511919 8223278 72.000000 0 3 616 NCBI RefSeq GCF_000156435.1-RS_2026_04_23 2026-04-23 7821 7170 82 na GCF_000156455.1 PRJNA224116 SAMN02595234 ABYB00000000.1 na 457431 67294 Streptomyces filamentosus NRRL 15998 strain=NRRL 15998 na latest Scaffold Major Full 2009-01-27 ASM15645v1 Broad Institute GCA_000156455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/455/GCF_000156455.1_ASM15645v1/ na na na haploid bacteria 7817295 7560086 71.500000 0 1 371 NCBI RefSeq GCF_000156455.1-RS_2025_05_25 2025-05-25 6970 6521 76 na GCF_000156495.1 PRJNA224116 SAMN00008846 ABYH00000000.1 na 537006 387661 Parabacteroides johnsonii DSM 18315 strain=DSM 18315 na latest Scaffold Major Full 2008-10-30 ASM15649v1 Washington University Genome Sequencing Center GCA_000156495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/495/GCF_000156495.1_ASM15649v1/ na assembly from type material na haploid bacteria 4787097 4612238 45.000000 0 106 527 NCBI RefSeq GCF_000156495.1-RS_2026_01_23 2026-01-23 4034 3740 63 na GCF_000156515.1 PRJNA224116 SAMN00008808 ABYI00000000.2 na 553973 89153 [Clostridium] hylemonae DSM 15053 strain=DSM 15053 na latest Scaffold Major Full 2009-03-02 ASM15651v1 Washington University Genome Sequencing Center GCA_000156515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/515/GCF_000156515.1_ASM15651v1/ na assembly from type material na haploid bacteria 3889859 3885459 49.000000 0 123 167 NCBI RefSeq GCF_000156515.1-RS_2026_02_27 2026-02-27 3742 3631 58 na GCF_000156535.1 PRJNA224116 SAMN00008856 ABYJ00000000.2 na 536231 166486 Roseburia intestinalis L1-82 strain=L1-82 na latest Scaffold Major Full 2009-06-22 ASM15653v1 Washington University Genome Sequencing Center GCA_000156535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/535/GCF_000156535.1_ASM15653v1/ na assembly from type material na haploid bacteria 4411375 4380675 42.500000 0 102 409 NCBI RefSeq GCF_000156535.1-RS_2026_02_27 2026-02-27 4344 4001 75 na GCF_000156555.1 PRJNA224116 SAMN00000625 ABYN00000000.1 na 525244 525244 Acinetobacter sp. ATCC 27244 strain=ATCC 27244 na latest Scaffold Major Full 2009-05-01 ASM15655v1 Baylor College of Medicine GCA_000156555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/555/GCF_000156555.1_ASM15655v1/ na na na haploid bacteria 3434013 3330366 39.500000 0 95 255 NCBI RefSeq GCF_000156555.1-RS_2025_02_24 2025-02-24 3264 3051 68 na GCF_000156575.1 PRJNA224116 SAMN00000626 ABYO00000000.1 na 525254 33032 Anaerococcus lactolyticus ATCC 51172 strain=ATCC 51172 na latest Scaffold Major Full 2009-05-01 ASM15657v1 Baylor College of Medicine GCA_000156575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/575/GCF_000156575.1_ASM15657v1/ na assembly from type material na haploid bacteria 2206675 2177754 35.000000 0 251 298 NCBI RefSeq GCF_000156575.1-RS_2025_08_04 2025-08-04 2236 2098 54 na GCF_000156595.1 PRJNA224116 SAMN00000629 ABYP00000000.1 na 548477 39791 Corynebacterium glucuronolyticum ATCC 51867 strain=ATCC 51867 na latest Scaffold Major Full 2009-05-05 ASM15659v1 Baylor College of Medicine GCA_000156595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/595/GCF_000156595.1_ASM15659v1/ na na na haploid bacteria 2809149 2784539 59.000000 0 64 105 NCBI RefSeq GCF_000156595.1-RS_2025_08_05 2025-08-05 2547 2425 57 na GCF_000156615.2 PRJNA224116 SAMN00000628 ABYQ00000000.2 na 525264 38303 Corynebacterium pseudogenitalium ATCC 33035 strain=ATCC 33035 na latest Scaffold Major Full 2010-11-09 ASM15661v2 Baylor College of Medicine GCA_000156615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/615/GCF_000156615.2_ASM15661v2/ na na na haploid bacteria 2601426 2600726 59.500000 0 9 16 NCBI RefSeq GCF_000156615.2-RS_2025_06_08 2025-06-08 2495 2393 67 na GCF_000156635.1 PRJNA224116 SAMN00008777 ABYS00000000.2 na 518635 1683 Bifidobacterium angulatum DSM 20098 = JCM 7096 strain=DSM 20098 na latest Scaffold Major Full 2009-04-09 ASM15663v1 Washington University Genome Sequencing Center GCA_000156635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/635/GCF_000156635.1_ASM15663v1/ na assembly from type material na haploid bacteria 2008208 2007108 59.500000 0 6 17 NCBI RefSeq GCF_000156635.1-RS_2026_05_16 2026-05-16 1643 1543 65 na GCF_000156655.1 PRJNA224116 SAMN00008825 ABYT00000000.1 reference genome 518637 1735 Holdemanella biformis DSM 3989 strain=DSM 3989 na latest Scaffold Major Full 2008-11-12 ASM15665v1 Washington University Genome Sequencing Center GCA_000156655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/655/GCF_000156655.1_ASM15665v1/ na assembly from type material na haploid bacteria 2517763 2415920 34.000000 0 44 161 NCBI RefSeq GCF_000156655.1-RS_2026_04_23 2026-04-23 2481 2401 50 na GCF_000156675.1 PRJNA224116 SAMN00008797 ABYU00000000.2 na 537007 1322 Blautia hansenii DSM 20583 strain=DSM 20583 na latest Scaffold Major Full 2009-08-21 ASM15667v1 Washington University Genome Sequencing Center GCA_000156675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/675/GCF_000156675.1_ASM15667v1/ na assembly from type material na haploid bacteria 3058721 3053221 39.000000 0 8 63 NCBI RefSeq GCF_000156675.1-RS_2026_04_07 2026-04-07 3097 2941 85 na GCF_000156695.2 PRJNA224116 SAMN02595236 ABYX00000000.2 na 457430 67294 Streptomyces filamentosus NRRL 11379 strain=NRRL 11379 na latest Scaffold Major Full 2014-02-21 ASM15669v2 Broad Institute GCA_000156695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/695/GCF_000156695.2_ASM15669v2/ na na na haploid bacteria 7851943 7824517 71.500000 0 1 417 NCBI RefSeq GCF_000156695.2-RS_2025_06_11 2025-06-11 7082 6696 79 na GCF_000156715.1 PRJNA224116 SAMN02595237 ABYY00000000.1 na 539329 28110 Francisella philomiragia subsp. philomiragia ATCC 25015 strain=ATCC 25015 na latest Scaffold Major Full 2008-12-23 ASM15671v1 Broad Institute GCA_000156715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/715/GCF_000156715.1_ASM15671v1/ na assembly from type material na haploid bacteria 1999684 1985978 32.500000 0 17 30 NCBI RefSeq GCF_000156715.1-RS_2026_03_03 2026-03-03 1925 1873 43 na GCF_000156735.1 PRJNA224116 SAMN02471874 ABZA00000000.1 na 569881 263437 Wolbachia endosymbiont of Culex quinquefasciatus JHB na na latest Scaffold Major Full 2008-11-18 ASM15673v1 University of Maryland Center for Bioinformatics and Computational Biology GCA_000156735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/735/GCF_000156735.1_ASM15673v1/ na na na haploid bacteria 1543661 1542137 34.000000 0 16 21 NCBI RefSeq GCF_000156735.1-RS_2026_01_08 2026-01-08 1489 1283 41 19114486 GCF_000156755.1 PRJNA224116 SAMN02595238 ABZF00000000.1 na 528345 485 Neisseria gonorrhoeae 1291 strain=1291 na latest Scaffold Major Full 2009-01-30 ASM15675v1 Broad Institute GCA_000156755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/755/GCF_000156755.1_ASM15675v1/ na na na haploid bacteria 2111705 2033233 52.500000 1 42 175 NCBI RefSeq GCF_000156755.1-RS_2026_04_04 2026-04-04 2110 1869 49 na GCF_000156775.1 PRJNA224116 SAMN02595239 ABZG00000000.1 na 528346 485 Neisseria gonorrhoeae 35/02 strain=35/02 na latest Scaffold Major Full 2009-01-30 ASM15677v1 Broad Institute GCA_000156775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/775/GCF_000156775.1_ASM15677v1/ na na na haploid bacteria 2134783 2043737 52.500000 1 40 156 NCBI RefSeq GCF_000156775.1-RS_2026_04_04 2026-04-04 2138 1872 53 na GCF_000156795.1 PRJNA224116 SAMN02595240 ABZH00000000.1 na 528347 485 Neisseria gonorrhoeae DGI18 strain=DGI18 na latest Scaffold Major Full 2009-01-30 ASM15679v1 Broad Institute GCA_000156795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/795/GCF_000156795.1_ASM15679v1/ na na na haploid bacteria 2115064 2035914 52.500000 1 42 153 NCBI RefSeq GCF_000156795.1-RS_2026_04_04 2026-04-04 2120 1864 53 na GCF_000156815.1 PRJNA224116 SAMN02595241 ABZI00000000.1 na 528353 485 Neisseria gonorrhoeae FA6140 strain=FA6140 na latest Scaffold Major Full 2009-01-30 ASM15681v1 Broad Institute GCA_000156815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/815/GCF_000156815.1_ASM15681v1/ na na na haploid bacteria 2125140 2033960 52.500000 1 55 161 NCBI RefSeq GCF_000156815.1-RS_2025_08_07 2025-08-07 2124 1865 53 na GCF_000156835.2 PRJNA224116 SAMN02595242 ABZJ00000000.2 na 528352 485 Neisseria gonorrhoeae FA19 strain=FA19 na latest Scaffold Major Full 2013-09-30 Neis_gono_FA19_V2 Broad Institute GCA_000156835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/835/GCF_000156835.2_Neis_gono_FA19_V2/ na na na haploid bacteria 2129051 2128451 52.500000 0 8 14 NCBI RefSeq GCF_000156835.2-RS_2026_01_13 2026-01-13 2249 1932 64 na GCF_000156855.2 PRJNA224116 SAMN02596923 na na 528354 485 Neisseria gonorrhoeae MS11 strain=MS11 na latest Complete Genome Major Full 2013-09-03 ASM15685v2 Broad Institute GCA_000156855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/855/GCF_000156855.2_ASM15685v2/ na na na haploid bacteria 2237793 2237793 52.500000 2 2 2 NCBI RefSeq GCF_000156855.2-RS_2026_07_03 2026-07-03 2369 2026 71 na GCF_000156875.1 PRJNA224116 SAMN02595243 ABZL00000000.1 na 528356 485 Neisseria gonorrhoeae PID18 strain=PID18 na latest Scaffold Major Full 2009-01-30 ASM15687v1 Broad Institute GCA_000156875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/875/GCF_000156875.1_ASM15687v1/ na na na haploid bacteria 2173641 2083259 52.500000 1 49 175 NCBI RefSeq GCF_000156875.1-RS_2026_04_04 2026-04-04 2160 1913 53 na GCF_000156895.1 PRJNA224116 SAMN02595244 ABZM00000000.1 na 528355 485 Neisseria gonorrhoeae PID1 strain=PID1 na latest Scaffold Major Full 2009-01-30 ASM15689v1 Broad Institute GCA_000156895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/895/GCF_000156895.1_ASM15689v1/ na na na haploid bacteria 2169881 2091324 52.500000 1 48 145 NCBI RefSeq GCF_000156895.1-RS_2026_04_04 2026-04-04 2190 1935 56 na GCF_000156915.1 PRJNA224116 SAMN02595245 ABZN00000000.1 na 528357 485 Neisseria gonorrhoeae PID24-1 strain=PID24-1 na latest Scaffold Major Full 2009-01-30 ASM15691v1 Broad Institute GCA_000156915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/915/GCF_000156915.1_ASM15691v1/ na na na haploid bacteria 2125573 2033752 52.500000 1 54 168 NCBI RefSeq GCF_000156915.1-RS_2025_08_07 2025-08-07 2137 1881 49 na GCF_000156935.1 PRJNA224116 SAMN02595246 ABZO00000000.1 na 528358 485 Neisseria gonorrhoeae PID332 strain=PID332 na latest Scaffold Major Full 2009-01-30 ASM15693v1 Broad Institute GCA_000156935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/935/GCF_000156935.1_ASM15693v1/ na na na haploid bacteria 2197024 2101853 52.500000 1 47 168 NCBI RefSeq GCF_000156935.1-RS_2026_04_04 2026-04-04 2193 1941 53 na GCF_000156955.1 PRJNA224116 SAMN02595247 ABZP00000000.1 na 528359 485 Neisseria gonorrhoeae SK-92-679 strain=SK-92-679 na latest Scaffold Major Full 2009-01-30 ASM15695v1 Broad Institute GCA_000156955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/955/GCF_000156955.1_ASM15695v1/ na na na haploid bacteria 2170499 2068277 52.500000 1 47 197 NCBI RefSeq GCF_000156955.1-RS_2026_04_04 2026-04-04 2152 1915 49 na GCF_000156975.1 PRJNA224116 SAMN02595248 ABZQ00000000.1 na 528360 485 Neisseria gonorrhoeae SK-93-1035 strain=SK-93-1035 na latest Scaffold Major Full 2009-01-30 ASM15697v1 Broad Institute GCA_000156975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/975/GCF_000156975.1_ASM15697v1/ na na na haploid bacteria 2144977 2049370 52.500000 0 40 156 NCBI RefSeq GCF_000156975.1-RS_2026_01_10 2026-01-10 2146 1897 55 na GCF_000156995.2 PRJNA224116 SAMN02471317 na reference genome 563797 53409 Pseudomonas coronafaciens pv. oryzae str. 1_6 strain=1_6 na latest Complete Genome Major Full 2019-11-20 ASM15699v2 University of North Carolina at Chapel Hill GCA_000156995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/995/GCF_000156995.2_ASM15699v2/ na na na haploid bacteria 5714458 5714458 58.000000 2 2 2 NCBI RefSeq GCF_000156995.2-RS_2026_03_22 2026-03-22 5195 4969 83 19015323 GCF_000157035.2 PRJNA224116 SAMN02463691 ABZY00000000.2 na 457388 457388 Parabacteroides sp. 2_1_7 strain=2_1_7 na latest Scaffold Major Full 2015-07-16 Bacteroides_sp_2_1_7_V2 Broad Institute GCA_000157035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/035/GCF_000157035.2_Bacteroides_sp_2_1_7_V2/ na na na haploid bacteria 5166302 5163202 45.000000 0 10 41 NCBI RefSeq GCF_000157035.2-RS_2024_08_09 2024-08-09 4393 4220 87 na GCF_000157055.1 PRJNA224116 SAMN02463692 ABZZ00000000.1 na 469590 469590 Bacteroides sp. 2_2_4 strain=2_2_4 na latest Scaffold Major Full 2009-02-05 ASM15705v1 Broad Institute GCA_000157055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/055/GCF_000157055.1_ASM15705v1/ na na na haploid bacteria 7101224 7004971 42.000000 1 64 204 NCBI RefSeq GCF_000157055.1-RS_2025_01_08 2025-01-08 5684 5425 81 na GCF_000157095.2 PRJNA224116 SAMN02463696 ACAB00000000.2 na 556258 556258 Bacteroides sp. D1 strain=D1 na latest Scaffold Major Full 2011-09-06 Bacteroides_sp_D1_V2 Broad Institute GCA_000157095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/095/GCF_000157095.2_Bacteroides_sp_D1_V2/ na na na haploid bacteria 5974559 5964759 42.000000 0 22 120 NCBI RefSeq GCF_000157095.2-RS_2025_01_08 2025-01-08 4807 4571 81 na GCF_000157135.1 PRJNA224116 SAMN02595249 ACAD00000000.1 na 565636 1351 Enterococcus faecalis T1 strain=T1 na latest Scaffold Major Full 2009-06-11 ASM15713v1 Broad Institute GCA_000157135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/135/GCF_000157135.1_ASM15713v1/ na na na haploid bacteria 2950691 2905629 37.500000 1 16 82 NCBI RefSeq GCF_000157135.1-RS_2026_05_02 2026-05-02 2848 2734 59 na GCF_000157155.1 PRJNA224116 SAMN02595250 ACAE00000000.1 na 565637 1351 Enterococcus faecalis T2 strain=T2 na latest Scaffold Major Full 2009-06-24 ASM15715v1 Broad Institute GCA_000157155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/155/GCF_000157155.1_ASM15715v1/ na na na haploid bacteria 3263835 3204817 37.000000 1 22 121 NCBI RefSeq GCF_000157155.1-RS_2025_04_22 2025-04-22 3202 3062 58 na GCF_000157175.1 PRJNA224116 SAMN02595251 ACAF00000000.1 na 565638 1351 Enterococcus faecalis T3 strain=T3 na latest Scaffold Major Full 2009-06-11 ASM15717v1 Broad Institute GCA_000157175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/175/GCF_000157175.1_ASM15717v1/ na na na haploid bacteria 2791208 2783549 37.500000 1 10 40 NCBI RefSeq GCF_000157175.1-RS_2025_04_21 2025-04-21 2689 2593 56 na GCF_000157195.1 PRJNA224116 SAMN02595252 ACAG00000000.1 na 565642 1351 Enterococcus faecalis ATCC 4200 strain=ATCC 4200 na latest Scaffold Major Full 2009-06-11 ASM15719v1 Broad Institute GCA_000157195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/195/GCF_000157195.1_ASM15719v1/ na na na haploid bacteria 3036165 3008852 37.500000 1 14 83 NCBI RefSeq GCF_000157195.1-RS_2025_04_15 2025-04-15 2943 2779 58 na GCF_000157215.1 PRJNA224116 SAMN02595253 ACAH00000000.1 na 565652 37734 Enterococcus casseliflavus EC30 strain=EC30 na latest Scaffold Major Full 2009-06-11 ASM15721v1 Broad Institute GCA_000157215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/215/GCF_000157215.1_ASM15721v1/ na na na haploid bacteria 3452979 3415885 42.500000 1 19 79 NCBI RefSeq GCF_000157215.1-RS_2026_04_17 2026-04-17 3277 3171 43 na GCF_000157235.1 PRJNA224116 SAMN02595254 ACAI00000000.1 na 565643 1351 Enterococcus faecalis DS5 strain=DS5 na latest Scaffold Major Full 2009-06-24 ASM15723v1 Broad Institute GCA_000157235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/235/GCF_000157235.1_ASM15723v1/ na na na haploid bacteria 3186424 3128174 37.000000 1 43 128 NCBI RefSeq GCF_000157235.1-RS_2026_04_23 2026-04-23 3127 2997 58 na GCF_000157255.1 PRJNA224116 SAMN02595255 ACAJ00000000.1 na 565653 1353 Enterococcus gallinarum EG2 strain=EG2 na latest Scaffold Major Full 2009-06-05 ASM15725v1 Broad Institute GCA_000157255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/255/GCF_000157255.1_ASM15725v1/ na na na haploid bacteria 3162323 3134429 40.500000 0 14 49 NCBI RefSeq GCF_000157255.1-RS_2026_02_08 2026-02-08 3043 2936 45 na GCF_000157275.1 PRJNA224116 SAMN02595256 ACAK00000000.1 na 565651 1351 Enterococcus faecalis ARO1/DG strain=AR01/DG na latest Scaffold Major Full 2009-06-24 ASM15727v1 Broad Institute GCA_000157275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/275/GCF_000157275.1_ASM15727v1/ na na na haploid bacteria 2849937 2821089 37.500000 1 13 39 NCBI RefSeq GCF_000157275.1-RS_2026_04_04 2026-04-04 2736 2649 58 na GCF_000157295.1 PRJNA224116 SAMN02595257 ACAL00000000.1 na 565654 37734 Enterococcus casseliflavus EC10 strain=EC10 na latest Scaffold Major Full 2009-06-23 ASM15729v1 Broad Institute GCA_000157295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/295/GCF_000157295.1_ASM15729v1/ na na na haploid bacteria 3451628 3423270 42.500000 1 18 54 NCBI RefSeq GCF_000157295.1-RS_2026_04_05 2026-04-05 3291 3192 56 na GCF_000157315.1 PRJNA224116 SAMN02595258 ACAM00000000.1 na 565645 1351 Enterococcus faecalis Merz96 strain=Merz96 na latest Scaffold Major Full 2009-06-24 ASM15731v1 Broad Institute GCA_000157315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/315/GCF_000157315.1_ASM15731v1/ na na na haploid bacteria 3085251 3037891 37.500000 1 21 106 NCBI RefSeq GCF_000157315.1-RS_2026_05_02 2026-05-02 2956 2832 56 na GCF_000157335.1 PRJNA224116 SAMN02595259 ACAN00000000.1 na 565646 1351 Enterococcus faecalis HIP11704 strain=HIP11704 na latest Scaffold Major Full 2009-06-22 ASM15733v1 Broad Institute GCA_000157335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/335/GCF_000157335.1_ASM15733v1/ na na na haploid bacteria 3202994 3129967 37.000000 1 38 143 NCBI RefSeq GCF_000157335.1-RS_2025_04_22 2025-04-22 3172 3012 57 na GCF_000157355.2 PRJNA224116 SAMN02596921 na na 565655 37734 Enterococcus casseliflavus EC20 strain=EC20 na latest Complete Genome Major Full 2013-04-11 ASM15735v2 Broad Institute GCA_000157355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/355/GCF_000157355.2_ASM15735v2/ na na na haploid bacteria 3427276 3427276 43.000000 1 1 1 NCBI RefSeq GCF_000157355.2-RS_2026_04_07 2026-04-07 3197 3097 79 na GCF_000157375.1 PRJNA224116 SAMN02595260 ACAP00000000.1 na 565648 1351 Enterococcus faecalis JH1 strain=JH1 na latest Scaffold Major Full 2009-06-22 ASM15737v1 Broad Institute GCA_000157375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/375/GCF_000157375.1_ASM15737v1/ na na na haploid bacteria 3042805 2994534 37.500000 1 24 112 NCBI RefSeq GCF_000157375.1-RS_2026_05_02 2026-05-02 2935 2827 56 na GCF_000157395.1 PRJNA224116 SAMN02595261 ACAQ00000000.1 na 565647 1351 Enterococcus faecalis E1Sol strain=E1Sol na latest Scaffold Major Full 2009-06-22 ASM15739v1 Broad Institute GCA_000157395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/395/GCF_000157395.1_ASM15739v1/ na na na haploid bacteria 2881904 2853151 37.500000 1 14 75 NCBI RefSeq GCF_000157395.1-RS_2026_05_02 2026-05-02 2822 2716 57 na GCF_000157415.1 PRJNA224116 SAMN02595262 ACAR00000000.1 na 565649 1351 Enterococcus faecalis Fly1 strain=Fly1 na latest Scaffold Major Full 2009-06-22 ASM15741v1 Broad Institute GCA_000157415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/415/GCF_000157415.1_ASM15741v1/ na na na haploid bacteria 2834288 2790649 37.500000 0 12 106 NCBI RefSeq GCF_000157415.1-RS_2026_01_10 2026-01-10 2679 2571 55 na GCF_000157435.1 PRJNA224116 SAMN02595263 ACAS00000000.1 na 565656 1352 Enterococcus faecium 1,230,933 strain=1,230,933 na latest Scaffold Major Full 2009-06-22 ASM15743v1 Broad Institute GCA_000157435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/435/GCF_000157435.1_ASM15743v1/ na na na haploid bacteria 3140782 2951887 38.000000 1 85 304 NCBI RefSeq GCF_000157435.1-RS_2026_04_23 2026-04-23 3020 2800 51 na GCF_000157455.1 PRJNA224116 SAMN02595264 ACAT00000000.1 na 565650 1351 Enterococcus faecalis D6 strain=D6 na latest Scaffold Major Full 2009-06-16 ASM15745v1 Broad Institute GCA_000157455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/455/GCF_000157455.1_ASM15745v1/ na na na haploid bacteria 2906246 2886934 37.500000 1 11 46 NCBI RefSeq GCF_000157455.1-RS_2026_05_02 2026-05-02 2791 2685 57 na GCF_000157475.1 PRJNA224116 SAMN02595265 ACAU00000000.1 na 565640 1351 Enterococcus faecalis T11 strain=T11 na latest Scaffold Major Full 2009-06-16 ASM15747v1 Broad Institute GCA_000157475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/475/GCF_000157475.1_ASM15747v1/ na na na haploid bacteria 2748724 2729089 37.500000 1 13 49 NCBI RefSeq GCF_000157475.1-RS_2025_04_21 2025-04-21 2599 2523 54 na GCF_000157495.1 PRJNA224116 SAMN02595266 ACAV00000000.1 na 565644 1351 Enterococcus faecalis CH188 strain=CH188 na latest Scaffold Major Full 2009-06-16 ASM15749v1 Broad Institute GCA_000157495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/495/GCF_000157495.1_ASM15749v1/ na na na haploid bacteria 3220345 3158913 37.000000 1 27 120 NCBI RefSeq GCF_000157495.1-RS_2025_04_22 2025-04-22 3168 3030 59 na GCF_000157515.1 PRJNA224116 SAMN02595267 ACAW00000000.1 na 565641 1351 Enterococcus faecalis X98 strain=X98 na latest Scaffold Major Full 2009-06-16 ASM15751v1 Broad Institute GCA_000157515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/515/GCF_000157515.1_ASM15751v1/ na na na haploid bacteria 2942699 2909529 37.500000 1 13 77 NCBI RefSeq GCF_000157515.1-RS_2026_04_14 2026-04-14 2920 2784 61 na GCF_000157535.1 PRJNA224116 SAMN02595268 ACAX00000000.1 na 565657 1352 Enterococcus faecium 1,231,502 strain=1,231,502 na latest Scaffold Major Full 2009-06-16 ASM15753v1 Broad Institute GCA_000157535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/535/GCF_000157535.1_ASM15753v1/ na na na haploid bacteria 3084930 2926114 37.500000 1 61 220 NCBI RefSeq GCF_000157535.1-RS_2026_04_27 2026-04-27 2964 2793 66 na GCF_000157555.1 PRJNA224116 SAMN02595269 ACAY00000000.1 na 565658 1352 Enterococcus faecium 1,231,501 strain=1,231,501 na latest Scaffold Major Full 2009-06-16 ASM15755v1 Broad Institute GCA_000157555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/555/GCF_000157555.1_ASM15755v1/ na na na haploid bacteria 2871230 2799375 38.000000 1 25 140 NCBI RefSeq GCF_000157555.1-RS_2026_04_23 2026-04-23 2785 2627 63 na GCF_000157575.1 PRJNA224116 SAMN02595270 ACAZ00000000.1 na 565659 1352 Enterococcus faecium 1,141,733 strain=1,141,733 na latest Scaffold Major Full 2009-06-16 ASM15757v1 Broad Institute GCA_000157575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/575/GCF_000157575.1_ASM15757v1/ na na na haploid bacteria 2924144 2865114 38.000000 1 25 101 NCBI RefSeq GCF_000157575.1-RS_2026_04_04 2026-04-04 2799 2668 50 na GCF_000157595.1 PRJNA224116 SAMN02595271 ACBA00000000.1 na 565660 1352 Enterococcus faecium 1,231,410 strain=1,231,410 na latest Scaffold Major Full 2009-06-22 ASM15759v1 Broad Institute GCA_000157595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/595/GCF_000157595.1_ASM15759v1/ na na na haploid bacteria 3101595 2943813 37.500000 1 69 230 NCBI RefSeq GCF_000157595.1-RS_2025_04_22 2025-04-22 2985 2816 49 na GCF_000157635.1 PRJNA224116 SAMN02595273 ACBC00000000.1 na 565662 1352 Enterococcus faecium Com12 strain=Com12 na latest Scaffold Major Full 2009-06-05 ASM15763v1 Broad Institute GCA_000157635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/635/GCF_000157635.1_ASM15763v1/ na na na haploid bacteria 2713738 2685402 38.000000 0 19 67 NCBI RefSeq GCF_000157635.1-RS_2026_01_19 2026-01-19 2614 2476 50 na GCF_000157655.1 PRJNA224116 SAMN02595274 ACBD00000000.1 na 565663 1352 Enterococcus faecium Com15 strain=Com15 na latest Scaffold Major Full 2009-06-05 ASM15765v1 Broad Institute GCA_000157655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/655/GCF_000157655.1_ASM15765v1/ na na na haploid bacteria 2801855 2771455 38.000000 0 20 70 NCBI RefSeq GCF_000157655.1-RS_2026_01_18 2026-01-18 2764 2571 66 na GCF_000157675.1 PRJNA224116 SAMN02595275 ACBG00000000.1 na 520454 235 Brucella abortus bv. 6 str. 870 strain=870 na latest Scaffold Major Full 2009-01-30 ASM15767v1 Broad Institute GCA_000157675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/675/GCF_000157675.1_ASM15767v1/ na na na haploid bacteria 3270344 3251719 57.000000 0 13 55 NCBI RefSeq GCF_000157675.1-RS_2026_05_17 2026-05-17 3205 2967 56 na GCF_000157695.1 PRJNA224116 SAMN02595276 ACBH00000000.1 na 520452 235 Brucella abortus bv. 4 str. 292 strain=292 na latest Scaffold Major Full 2009-01-30 ASM15769v1 Broad Institute GCA_000157695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/695/GCF_000157695.1_ASM15769v1/ na na na haploid bacteria 3272945 3254713 57.500000 0 12 47 NCBI RefSeq GCF_000157695.1-RS_2026_05_15 2026-05-15 3210 2978 56 na GCF_000157715.1 PRJNA224116 SAMN02595277 ACBI00000000.1 na 520451 235 Brucella abortus bv. 3 str. Tulya strain=Tulya na latest Scaffold Major Full 2009-01-30 ASM15771v1 Broad Institute GCA_000157715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/715/GCF_000157715.1_ASM15771v1/ na na na haploid bacteria 3282764 3259693 57.000000 0 13 60 NCBI RefSeq GCF_000157715.1-RS_2026_05_15 2026-05-15 3209 2978 55 na GCF_000157735.1 PRJNA224116 SAMN02595278 ACBJ00000000.1 na 520450 235 Brucella abortus bv. 2 str. 86/8/59 strain=86/8/59 na latest Scaffold Major Full 2009-01-30 ASM15773v1 Broad Institute GCA_000157735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/735/GCF_000157735.1_ASM15773v1/ na na na haploid bacteria 3294912 3255633 57.500000 0 21 130 NCBI RefSeq GCF_000157735.1-RS_2026_05_17 2026-05-17 3262 3008 56 na GCF_000157755.1 PRJNA224116 SAMN02595279 ACBK00000000.1 na 520489 29461 Brucella suis bv. 5 str. 513 strain=513 na latest Scaffold Major Full 2009-01-27 ASM15775v1 Broad Institute GCA_000157755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/755/GCF_000157755.1_ASM15775v1/ na na na haploid bacteria 3323676 3286636 57.500000 0 19 113 NCBI RefSeq GCF_000157755.1-RS_2026_05_14 2026-05-14 3249 3067 56 na GCF_000157775.1 PRJNA224116 SAMN02595280 ACBL00000000.1 na 520487 29461 Brucella suis bv. 3 str. 686 strain=686 na latest Scaffold Major Full 2009-01-27 ASM15777v1 Broad Institute GCA_000157775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/775/GCF_000157775.1_ASM15777v1/ na na na haploid bacteria 3298529 3267342 57.500000 0 23 129 NCBI RefSeq GCF_000157775.1-RS_2026_05_14 2026-05-14 3226 3011 57 na GCF_000157795.1 PRJNA224116 SAMN02595281 ACBM00000000.1 na 520463 120576 Brucella pinnipedialis M163/99/10 strain=M163/99/10 na latest Scaffold Major Full 2009-01-27 ASM15779v1 Broad Institute GCA_000157795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/795/GCF_000157795.1_ASM15779v1/ na na na haploid bacteria 3404050 3256270 57.500000 0 89 418 NCBI RefSeq GCF_000157795.1-RS_2025_08_04 2025-08-04 3363 3004 51 na GCF_000157815.1 PRJNA224116 SAMN02595282 ACBN00000000.1 na 520461 120576 Brucella pinnipedialis B2/94 strain=B2/94 na latest Scaffold Major Full 2009-01-27 ASM15781v1 Broad Institute GCA_000157815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/815/GCF_000157815.1_ASM15781v1/ na na na haploid bacteria 3398674 3347022 57.000000 0 19 94 NCBI RefSeq GCF_000157815.1-RS_2025_06_12 2025-06-12 3288 3091 56 na GCF_000157835.1 PRJNA224116 SAMN02595283 ACBO00000000.1 na 520459 120577 Brucella ceti M644/93/1 strain=M644/93/1 na latest Scaffold Major Full 2009-01-27 ASM15783v1 Broad Institute GCA_000157835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/835/GCF_000157835.1_ASM15783v1/ na na na haploid bacteria 3334689 3283578 57.000000 0 17 104 NCBI RefSeq GCF_000157835.1-RS_2025_08_08 2025-08-08 3236 2996 56 na GCF_000157855.1 PRJNA224116 SAMN02595284 ACBP00000000.1 na 520460 120577 Brucella ceti M13/05/1 strain=M13/05/1 na latest Scaffold Major Full 2009-01-27 ASM15785v1 Broad Institute GCA_000157855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/855/GCF_000157855.1_ASM15785v1/ na na na haploid bacteria 3337230 3282220 57.500000 0 22 118 NCBI RefSeq GCF_000157855.1-RS_2025_08_08 2025-08-08 3245 3002 56 na GCF_000157875.1 PRJNA224116 SAMN02595285 ACBQ00000000.1 na 520449 520449 Brucella sp. 83/13 strain=83/13 na latest Scaffold Major Full 2009-01-27 ASM15787v1 Broad Institute GCA_000157875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/875/GCF_000157875.1_ASM15787v1/ na na na haploid bacteria 3153851 3113340 57.000000 0 20 77 NCBI RefSeq GCF_000157875.1-RS_2024_08_22 2024-08-22 3019 2791 56 na GCF_000157895.3 PRJNA224116 SAMN02603596 na reference genome 557599 1768 Mycobacterium kansasii ATCC 12478 strain=ATCC 12478 na latest Complete Genome Major Full 2013-11-01 ASM15789v2 McGill University GCA_000157895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/895/GCF_000157895.3_ASM15789v2/ na assembly from type material na haploid bacteria 6577228 6577228 66.000000 2 2 2 NCBI RefSeq GCF_000157895.3-RS_2026_03_31 2026-03-31 5818 5505 52 na GCF_000157915.1 PRJNA224116 SAMN00008769 ACBW00000000.1 na 547042 387090 Phocaeicola coprophilus DSM 18228 = JCM 13818 strain=DSM 18228 na latest Scaffold Major Full 2009-02-09 ASM15791v1 Washington University Genome Sequencing Center GCA_000157915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/915/GCF_000157915.1_ASM15791v1/ na assembly from type material na haploid bacteria 4041504 3855443 45.500000 0 73 285 NCBI RefSeq GCF_000157915.1-RS_2025_09_10 2025-09-10 3420 3204 68 na GCF_000157935.1 PRJNA224116 SAMN00008847 ACBX00000000.2 na 537011 165179 Segatella copri DSM 18205 strain=DSM 18205 na latest Scaffold Major Full 2009-10-02 ASM15793v1 Washington University Genome Sequencing Center GCA_000157935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/935/GCF_000157935.1_ASM15793v1/ na assembly from type material na haploid bacteria 3512473 3507873 45.000000 0 27 73 NCBI RefSeq GCF_000157935.1-RS_2026_04_07 2026-04-07 2990 2835 77 na GCF_000157955.1 PRJNA224116 SAMN00008862 ACBY00000000.2 na 411471 214851 Subdoligranulum variabile DSM 15176 strain=DSM 15176 na latest Scaffold Major Full 2009-10-06 ASM15795v1 Washington University Genome Sequencing Center GCA_000157955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/955/GCF_000157955.1_ASM15795v1/ na assembly from type material na haploid bacteria 3245471 3237471 58.000000 0 11 91 NCBI RefSeq GCF_000157955.1-RS_2026_04_14 2026-04-14 3120 3008 68 na GCF_000157975.1 PRJNA224116 SAMN02415620 ACBZ00000000.1 na 476272 53443 Blautia hydrogenotrophica DSM 10507 strain=DSM 10507 na latest Scaffold Major Full 2009-02-24 ASM15797v1 Washington University Genome Sequencing Center GCA_000157975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/975/GCF_000157975.1_ASM15797v1/ na assembly from type material na haploid bacteria 3626943 3565428 45.000000 0 33 233 NCBI RefSeq GCF_000157975.1-RS_2026_02_27 2026-02-27 3528 3394 66 na GCF_000157995.1 PRJNA224116 SAMN00008830 ACCF00000000.1 na 545696 61171 Holdemania filiformis DSM 12042 strain=DSM 12042 na latest Scaffold Major Full 2009-02-24 ASM15799v1 Washington University Genome Sequencing Center GCA_000157995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/157/995/GCF_000157995.1_ASM15799v1/ na assembly from type material na haploid bacteria 3932923 3803745 50.000000 0 35 289 NCBI RefSeq GCF_000157995.1-RS_2026_04_23 2026-04-23 3686 3586 52 na GCF_000158015.1 PRJNA224116 SAMN00008778 ACCG00000000.2 na 518634 1685 Bifidobacterium breve DSM 20213 = JCM 1192 strain=DSM 20213 na latest Scaffold Major Full 2009-11-19 ASM15801v1 Washington University Genome Sequencing Center GCA_000158015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/015/GCF_000158015.1_ASM15801v1/ na assembly from type material na haploid bacteria 2331386 2329986 58.500000 0 103 117 NCBI RefSeq GCF_000158015.1-RS_2025_08_08 2025-08-08 2048 1901 61 na GCF_000158035.1 PRJNA224116 SAMN00008759 ACCH00000000.1 na 537012 246787 Bacteroides cellulosilyticus DSM 14838 strain=DSM 14838 na latest Scaffold Major Full 2009-02-09 ASM15803v1 Washington University Genome Sequencing Center GCA_000158035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/035/GCF_000158035.1_ASM15803v1/ na assembly from type material na haploid bacteria 6870144 6726268 42.500000 0 66 525 NCBI RefSeq GCF_000158035.1-RS_2026_05_16 2026-05-16 5191 4904 54 na GCF_000158055.1 PRJNA224116 SAMN00008854 ACCI00000000.2 na 521000 587 Providencia rettgeri DSM 1131 strain=DSM 1131 na latest Scaffold Major Full 2009-11-13 ASM15805v1 Washington University Genome Sequencing Center GCA_000158055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/055/GCF_000158055.1_ASM15805v1/ na na na haploid bacteria 4764068 4749568 40.000000 0 32 177 NCBI RefSeq GCF_000158055.1-RS_2025_03_26 2025-03-26 4480 4285 93 na GCF_000158075.1 PRJNA224116 SAMN00008804 ACCJ00000000.1 na 518636 333367 [Clostridium] asparagiforme DSM 15981 strain=DSM 15981 na latest Scaffold Major Full 2009-02-24 ASM15807v1 Washington University Genome Sequencing Center GCA_000158075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/075/GCF_000158075.1_ASM15807v1/ na assembly from type material na haploid bacteria 6417332 6224391 55.500000 0 92 640 NCBI RefSeq GCF_000158075.1-RS_2026_02_27 2026-02-27 6038 5754 68 na GCF_000158095.2 PRJNA224116 SAMN02436266 ACCU00000000.2 reference genome 244592 388408 Roseibium alexandrii DFL-11 strain=DFL-11 na latest Chromosome Major Full 2018-11-02 ASM15809v2 Moore Foundation GCA_000158095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/095/GCF_000158095.2_ASM15809v2/ na assembly from type material na haploid bacteria 5462930 5461826 56.500000 3 3 6 NCBI RefSeq GCF_000158095.2-RS_2025_12_09 2025-12-09 5081 4992 65 na GCF_000158115.1 PRJNA224116 SAMN02436182 ACCV00000000.1 na 391586 391586 Vibrio sp. 16 strain=16 na latest Scaffold Major Full 2009-01-05 ASM15811v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000158115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/115/GCF_000158115.1_ASM15811v1/ na na na haploid bacteria 4535833 4489565 46.500000 0 80 178 NCBI RefSeq GCF_000158115.1-RS_2025_08_25 2025-08-25 4194 3972 106 na GCF_000158175.1 PRJNA224116 SAMN02436313 ACCY00000000.1 reference genome 565045 1341119 Luminiphilus syltensis NOR5-1B strain=NOR5-1B na latest Scaffold Major Full 2009-01-06 ASM15817v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000158175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/175/GCF_000158175.1_ASM15817v1/ na assembly from type material na haploid bacteria 3261541 3247593 56.500000 0 1 29 NCBI RefSeq GCF_000158175.1-RS_2025_12_10 2025-12-10 2959 2878 46 23705883 GCF_000158195.2 PRJNA224116 SAMN02463687 ACDB00000000.2 na 469616 850 Fusobacterium mortiferum ATCC 9817 strain=ATCC 9817 na latest Scaffold Major Full 2011-07-27 Fuso_mor_ATCC9817_V2 Broad Institute GCA_000158195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/195/GCF_000158195.2_Fuso_mor_ATCC9817_V2/ na na na haploid bacteria 2671036 2667436 29.000000 0 8 44 NCBI RefSeq GCF_000158195.2-RS_2025_12_06 2025-12-06 2717 2595 85 na GCF_000158215.3 PRJNA224116 SAMN02463707 ACDC00000000.3 na 469599 860 Fusobacterium periodonticum 2_1_31 strain=2_1_31 na latest Scaffold Major Full 2014-09-25 Fuso_sp_2_1_31_V3 Broad Institute GCA_000158215.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/215/GCF_000158215.3_Fuso_sp_2_1_31_V3/ na na na haploid bacteria 2546312 2472857 28.000000 0 6 61 NCBI RefSeq GCF_000158215.3-RS_2025_06_08 2025-06-08 2418 2279 65 na GCF_000158235.1 PRJNA224116 SAMN02463709 ACDD00000000.1 na 469605 849 Fusobacterium gonidiaformans 3-1-5R strain=3_1_5R na latest Scaffold Major Full 2009-03-04 ASM15823v1 Broad Institute GCA_000158235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/235/GCF_000158235.1_ASM15823v1/ na na na haploid bacteria 1930430 1848430 32.500000 0 28 99 NCBI RefSeq GCF_000158235.1-RS_2025_12_03 2025-12-03 1955 1868 52 na GCF_000158255.2 PRJNA224116 SAMN02463710 ACDE00000000.2 na 469606 155615 Fusobacterium vincentii 4_1_13 strain=4_1_13 na latest Scaffold Major Full 2015-07-15 Fuso_sp_4_1_13_V2 Broad Institute GCA_000158255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/255/GCF_000158255.2_Fuso_sp_4_1_13_V2/ na na na haploid bacteria 2271126 2269426 27.000000 0 7 24 NCBI RefSeq GCF_000158255.2-RS_2026_04_15 2026-04-15 2227 2119 60 na GCF_000158275.2 PRJNA224116 SAMN02463711 na na 457405 76859 Fusobacterium animalis 7_1 strain=7_1 na latest Complete Genome Major Full 2014-02-03 ASM15827v2 Broad Institute GCA_000158275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/275/GCF_000158275.2_ASM15827v2/ na na na haploid bacteria 2514029 2514029 27.000000 2 2 2 NCBI RefSeq GCF_000158275.2-RS_2026_04_14 2026-04-14 2493 2369 64 na GCF_000158295.2 PRJNA224116 SAMN02463712 ACDG00000000.2 na 556263 859 Fusobacterium necrophorum D12 strain=D12 na latest Scaffold Major Full 2011-07-27 Fuso_sp_D12_V2 Broad Institute GCA_000158295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/295/GCF_000158295.2_Fuso_sp_D12_V2/ na na na haploid bacteria 1960925 1950825 35.000000 0 17 118 NCBI RefSeq GCF_000158295.2-RS_2025_12_20 2025-12-20 2002 1834 61 na GCF_000158315.2 PRJNA224116 SAMN02463713 ACDH00000000.2 na 469617 861 Fusobacterium ulcerans ATCC 49185 strain=ATCC 49185 na latest Scaffold Major Full 2012-09-19 Fuso_ulc_ATCC49185_V2 Broad Institute GCA_000158315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/315/GCF_000158315.2_Fuso_ulc_ATCC49185_V2/ na assembly from type material na haploid bacteria 3487504 3483404 30.500000 0 8 49 NCBI RefSeq GCF_000158315.2-RS_2026_04_23 2026-04-23 3333 3214 75 na GCF_000158335.2 PRJNA224116 SAMN02463698 ACDI00000000.2 na 556260 357276 Phocaeicola dorei 5_1_36/D4 strain=5_1_36/D4 na latest Scaffold Major Full 2011-09-06 Bact_dorei_5_1_36_D4_V2 Broad Institute GCA_000158335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/335/GCF_000158335.2_Bact_dorei_5_1_36_D4_V2/ na na na haploid bacteria 5538248 5534748 41.500000 0 10 45 NCBI RefSeq GCF_000158335.2-RS_2026_01_08 2026-01-08 4530 4323 82 na GCF_000158375.2 PRJNA224116 SAMN02463700 ACDK00000000.2 na 457396 457396 Clostridium sp. 7_2_43FAA strain=7_2_43FAA na latest Scaffold Major Full 2012-09-18 Clostridium_sp_7_2_43FAA_V2 Broad Institute GCA_000158375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/375/GCF_000158375.2_Clostridium_sp_7_2_43FAA_V2/ na na na haploid bacteria 3813122 3807822 28.000000 0 5 58 NCBI RefSeq GCF_000158375.2-RS_2024_05_28 2024-05-28 3629 3487 96 na GCF_000158395.1 PRJNA224116 SAMN02463720 ACDL00000000.1 na 556266 562 Escherichia coli D9 strain=D9 na latest Scaffold Major Full 2009-02-24 ASM15839v1 Broad Institute GCA_000158395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/395/GCF_000158395.1_ASM15839v1/ na na na haploid bacteria 4764345 4717340 50.500000 0 31 98 NCBI RefSeq GCF_000158395.1-RS_2025_06_13 2025-06-13 4587 4362 70 na GCF_000158415.2 PRJNA224116 SAMN02463705 ACDM00000000.2 na 457401 457401 Escherichia sp. 4_1_40B strain=4_1_40B na latest Scaffold Major Full 2012-05-10 Escherichia_sp_4_1_40B_V2 Broad Institute GCA_000158415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/415/GCF_000158415.2_Escherichia_sp_4_1_40B_V2/ na na na haploid bacteria 4911206 4905506 50.500000 0 8 65 NCBI RefSeq GCF_000158415.2-RS_2025_01_06 2025-01-06 4900 4482 108 na GCF_000158435.2 PRJNA224116 SAMN02463714 ACDN00000000.2 na 613026 37372 Helicobacter bilis ATCC 43879 strain=ATCC 43879 na latest Scaffold Major Full 2013-09-30 Heli_bilis_ATCC43879_V2 Broad Institute GCA_000158435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/435/GCF_000158435.2_Heli_bilis_ATCC43879_V2/ na na na haploid bacteria 2530521 2523721 35.000000 0 9 77 NCBI RefSeq GCF_000158435.2-RS_2026_01_30 2026-01-30 2450 2327 42 25212613 GCF_000158455.1 PRJNA224116 SAMN02463715 ACDO00000000.1 na 556267 157268 Helicobacter winghamensis ATCC BAA-430 strain=ATCC BAA-430 na latest Scaffold Major Full 2009-03-10 ASM15845v1 Broad Institute GCA_000158455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/455/GCF_000158455.1_ASM15845v1/ na assembly from type material na haploid bacteria 1690216 1654865 35.500000 0 21 55 NCBI RefSeq GCF_000158455.1-RS_2026_05_16 2026-05-16 1735 1662 43 25212613 GCF_000158475.2 PRJNA224116 SAMN02463716 ACDP00000000.2 reference genome 556268 556268 Oxalobacter paraformigenes strain=HOxBLS na latest Scaffold Major Full 2013-09-30 Oxal_for_HOxBLS_2_V2 Broad Institute GCA_000158475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/475/GCF_000158475.2_Oxal_for_HOxBLS_2_V2/ na assembly from type material na haploid bacteria 2488386 2485686 52.500000 0 2 29 NCBI RefSeq GCF_000158475.2-RS_2026_03_03 2026-03-03 2297 2233 51 na GCF_000158495.1 PRJNA224116 SAMN02463717 ACDQ00000000.1 na 556269 847 Oxalobacter formigenes OXCC13 strain=OXCC13 na latest Scaffold Major Full 2009-03-04 ASM15849v1 Broad Institute GCA_000158495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/495/GCF_000158495.1_ASM15849v1/ na na na haploid bacteria 2436766 2417973 49.500000 0 9 27 NCBI RefSeq GCF_000158495.1-RS_2026_02_08 2026-02-08 2240 2168 52 na GCF_000158575.1 PRJNA224116 SAMN02436221 ACDV00000000.1 na 391601 391601 Stenotrophomonas sp. SKA14 strain=SKA14 na latest Scaffold Major Full 2009-01-07 ASM15857v1 Moore Foundation GCA_000158575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/575/GCF_000158575.1_ASM15857v1/ na na na haploid bacteria 5020454 4990006 66.500000 0 3 50 NCBI RefSeq GCF_000158575.1-RS_2024_05_05 2024-05-05 4634 4521 79 na GCF_000158595.1 PRJNA224116 SAMN02436267 ACDW00000000.1 na 93058 1219 Prochlorococcus marinus str. MIT 9202 strain=MIT 9202 na latest Scaffold Major Full 2009-01-26 ASM15859v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000158595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/595/GCF_000158595.1_ASM15859v1/ na na na haploid bacteria 1691453 1690387 31.000000 0 1 6 NCBI RefSeq GCF_000158595.1-RS_2025_01_28 2025-01-28 1940 1881 43 na GCF_000158615.1 PRJNA224116 SAMN00008822 ACEA00000000.1 na 546274 539 Eikenella corrodens ATCC 23834 strain=ATCC 23834 na latest Scaffold Major Full 2009-02-05 ASM15861v1 Washington University Genome Sequencing Center GCA_000158615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/615/GCF_000158615.1_ASM15861v1/ na assembly from type material na haploid bacteria 2171245 2135355 56.000000 0 12 65 NCBI RefSeq GCF_000158615.1-RS_2026_05_16 2026-05-16 2178 2074 53 na GCF_000158635.1 PRJNA224116 SAMN00008817 ACEB00000000.1 na 566549 43768 Corynebacterium matruchotii ATCC 33806 strain=ATCC 33806 na latest Scaffold Major Full 2009-02-05 ASM15863v1 Washington University Genome Sequencing Center GCA_000158635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/635/GCF_000158635.1_ASM15863v1/ na na na haploid bacteria 2992255 2967145 57.000000 0 10 58 NCBI RefSeq GCF_000158635.1-RS_2026_02_08 2026-02-08 2717 2619 55 na GCF_000158675.1 PRJNA224116 SAMN02595287 ACEF00000000.1 na 520462 120576 Brucella pinnipedialis M292/94/1 strain=M292/94/1 na latest Scaffold Major Full 2009-02-24 ASM15867v1 Broad Institute GCA_000158675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/675/GCF_000158675.1_ASM15867v1/ na na na haploid bacteria 3373519 3323436 57.500000 0 15 80 NCBI RefSeq GCF_000158675.1-RS_2025_06_12 2025-06-12 3243 3051 56 na GCF_000158695.1 PRJNA224116 SAMN02595288 ACEG00000000.1 na 520464 29459 Brucella melitensis bv. 1 str. Rev.1 strain=Rev.1 na latest Scaffold Major Full 2009-02-24 ASM15869v1 Broad Institute GCA_000158695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/695/GCF_000158695.1_ASM15869v1/ na na na haploid bacteria 3305822 3270141 57.500000 0 26 93 NCBI RefSeq GCF_000158695.1-RS_2026_04_26 2026-04-26 3248 3003 55 na GCF_000158715.1 PRJNA224116 SAMN02595289 ACEH00000000.1 na 520456 29460 Brucella neotomae 5K33 strain=5K33 na latest Scaffold Major Full 2009-02-24 ASM15871v1 Broad Institute GCA_000158715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/715/GCF_000158715.1_ASM15871v1/ na assembly from type material na haploid bacteria 3329623 3299059 57.500000 0 11 68 NCBI RefSeq GCF_000158715.1-RS_2025_08_08 2025-08-08 3239 3017 55 na GCF_000158735.1 PRJNA224116 SAMN02595290 ACEI00000000.1 na 520466 29459 Brucella melitensis bv. 3 str. Ether strain=Ether na latest Scaffold Major Full 2009-02-24 ASM15873v1 Broad Institute GCA_000158735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/735/GCF_000158735.1_ASM15873v1/ na na na haploid bacteria 3308792 3279914 57.000000 0 13 105 NCBI RefSeq GCF_000158735.1-RS_2026_05_31 2026-05-31 3259 3009 56 na GCF_000158755.1 PRJNA224116 SAMN02595291 ACEJ00000000.1 na 520458 120577 Brucella ceti M490/95/1 strain=M490/95/1 na latest Scaffold Major Full 2009-02-24 ASM15875v1 Broad Institute GCA_000158755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/755/GCF_000158755.1_ASM15875v1/ na na na haploid bacteria 3345471 3274471 57.500000 0 17 142 NCBI RefSeq GCF_000158755.1-RS_2026_05_13 2026-05-13 3233 3016 56 na GCF_000158775.1 PRJNA224116 SAMN02595292 ACEK00000000.1 na 520457 120577 Brucella ceti B1/94 strain=B1/94 na latest Scaffold Major Full 2009-02-24 ASM15877v1 Broad Institute GCA_000158775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/775/GCF_000158775.1_ASM15877v1/ na assembly from type material na haploid bacteria 3337159 3276724 57.500000 0 14 102 NCBI RefSeq GCF_000158775.1-RS_2025_12_22 2025-12-22 3211 2999 55 na GCF_000158795.1 PRJNA224116 SAMN02595293 ACEL00000000.1 na 520455 235 Brucella abortus bv. 9 str. C68 strain=C68 na latest Scaffold Major Full 2009-02-24 ASM15879v1 Broad Institute GCA_000158795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/795/GCF_000158795.1_ASM15879v1/ na na na haploid bacteria 3269576 3249359 57.000000 0 13 50 NCBI RefSeq GCF_000158795.1-RS_2026_05_15 2026-05-15 3203 2986 56 na GCF_000158815.1 PRJNA224116 SAMN02595295 ACES00000000.1 na 219305 219305 Micromonospora sp. ATCC 39149 strain=ATCC 39149 na latest Scaffold Major Full 2009-03-02 ASM15881v1 Broad Institute GCA_000158815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/815/GCF_000158815.1_ASM15881v1/ na na na haploid bacteria 6819904 6505026 72.500000 0 4 339 NCBI RefSeq GCF_000158815.1-RS_2024_08_13 2024-08-13 6171 5577 60 na GCF_000158835.2 PRJNA224116 SAMN02463686 ACET00000000.2 na 469615 849 Fusobacterium gonidiaformans ATCC 25563 strain=ATCC 25563 na latest Scaffold Major Full 2015-07-15 Fuso_gon_ATCC25563_V2 Broad Institute GCA_000158835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/835/GCF_000158835.2_Fuso_gon_ATCC25563_V2/ na assembly from type material na haploid bacteria 1698329 1696529 32.500000 0 6 24 NCBI RefSeq GCF_000158835.2-RS_2025_08_08 2025-08-08 1724 1625 64 na GCF_000158855.1 PRJNA224116 SAMN02595296 ACEU00000000.1 na 591157 591157 Streptomyces sp. SPB78 strain=SPB78 na latest Scaffold Major Full 2009-03-02 ASM15885v1 Broad Institute GCA_000158855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/855/GCF_000158855.1_ASM15885v1/ na na na haploid bacteria 7557384 6897976 73.000000 0 4 694 NCBI RefSeq GCF_000158855.1-RS_2025_03_25 2025-03-25 6471 5721 71 na GCF_000158875.1 PRJNA224116 SAMN02595297 ACEV00000000.1 na 591158 591158 Streptomyces sp. AA4 strain=AA4 na latest Scaffold Major Full 2009-03-02 ASM15887v1 Broad Institute GCA_000158875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/875/GCF_000158875.1_ASM15887v1/ na na na haploid bacteria 9175669 9152172 70.000000 0 4 98 NCBI RefSeq GCF_000158875.1-RS_2024_08_08 2024-08-08 8608 8413 65 na GCF_000158895.1 PRJNA224116 SAMN02595298 ACEW00000000.1 na 253839 253839 Streptomyces sp. C strain=C na latest Scaffold Major Full 2009-03-02 ASM15889v1 Broad Institute GCA_000158895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/895/GCF_000158895.1_ASM15889v1/ na na na haploid bacteria 8461333 7916041 72.500000 0 4 652 NCBI RefSeq GCF_000158895.1-RS_2024_05_25 2024-05-25 7713 7011 84 na GCF_000158915.1 PRJNA224116 SAMN02595299 ACEX00000000.1 reference genome 457427 998084 Streptomyces himastatinicus ATCC 53653 strain=ATCC 53653 na latest Scaffold Major Full 2009-03-02 ASM15891v1 Broad Institute GCA_000158915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/915/GCF_000158915.1_ASM15891v1/ na assembly from type material na haploid bacteria 11030030 10466286 71.000000 0 2 783 NCBI RefSeq GCF_000158915.1-RS_2026_05_01 2026-05-01 9684 8775 72 na GCF_000158935.1 PRJNA224116 SAMN02595300 ACEY00000000.1 na 457428 1916 Streptomyces lividans TK24 strain=TK24 na latest Scaffold Major Full 2009-03-02 ASM15893v1 Broad Institute GCA_000158935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/935/GCF_000158935.1_ASM15893v1/ na na na haploid bacteria 8318010 8190887 72.000000 0 1 333 NCBI RefSeq GCF_000158935.1-RS_2025_06_08 2025-06-08 7635 7169 75 na GCF_000158955.1 PRJNA224116 SAMN02595301 ACEZ00000000.1 na 591159 1938 Streptomyces viridochromogenes DSM 40736 strain=DSM 40736 na latest Scaffold Major Full 2009-03-02 ASM15895v1 Broad Institute GCA_000158955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/955/GCF_000158955.1_ASM15895v1/ na na na haploid bacteria 8653262 8548109 71.000000 0 1 226 NCBI RefSeq GCF_000158955.1-RS_2025_04_26 2025-04-26 7855 7291 75 na GCF_000158975.1 PRJNA224116 SAMN02595302 ACFA00000000.1 na 467200 35619 Streptomyces griseoflavus Tu4000 strain=Tu4000 na latest Scaffold Major Full 2009-03-02 ASM15897v1 Broad Institute GCA_000158975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/975/GCF_000158975.1_ASM15897v1/ na na na haploid bacteria 8047042 7364052 71.500000 0 1 927 NCBI RefSeq GCF_000158975.1-RS_2025_06_09 2025-06-09 7219 6387 71 na GCF_000158995.1 PRJNA224116 SAMN02595303 ACFF00000000.1 na 437701 437701 Brucella sp. F5/99 strain=F5/99 na latest Scaffold Major Full 2009-04-01 ASM15899v1 Broad Institute GCA_000158995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/995/GCF_000158995.1_ASM15899v1/ na na na haploid bacteria 3336716 3290536 57.500000 0 18 85 NCBI RefSeq GCF_000158995.1-RS_2024_08_22 2024-08-22 3212 3015 55 na GCF_000159015.1 PRJNA224116 SAMN00001853 ACFG00000000.1 reference genome 525245 103618 Gleimia coleocanis DSM 15436 strain=DSM 15436 na latest Scaffold Major Full 2009-01-27 ASM15901v1 Baylor College of Medicine GCA_000159015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/015/GCF_000159015.1_ASM15901v1/ na assembly from type material na haploid bacteria 1723843 1719346 49.500000 0 35 40 NCBI RefSeq GCF_000159015.1-RS_2026_05_01 2026-05-01 1567 1498 56 na GCF_000159035.1 PRJNA224116 SAMN00002545 ACFH00000000.1 na 525246 103621 Actinomyces urogenitalis DSM 15434 strain=DSM 15434 na latest Scaffold Major Full 2009-01-27 ASM15903v1 Baylor College of Medicine GCA_000159035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/035/GCF_000159035.1_ASM15903v1/ na assembly from type material na haploid bacteria 2702812 2614023 68.500000 0 67 230 NCBI RefSeq GCF_000159035.1-RS_2025_08_08 2025-08-08 2354 2196 54 na GCF_000159055.1 PRJNA224116 SAMN02415619 ACFX00000000.2 na 411486 411486 Clostridium sp. M62/1 strain=M62/1 na latest Scaffold Major Full 2010-01-08 ASM15905v1 Washington University Genome Sequencing Center GCA_000159055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/055/GCF_000159055.1_ASM15905v1/ na na na haploid bacteria 3842594 3836694 50.000000 0 26 85 NCBI RefSeq GCF_000159055.1-RS_2024_05_28 2024-05-28 3626 3468 83 na GCF_000159075.2 PRJNA224116 SAMN02463697 ACGA00000000.2 na 556259 556259 Bacteroides sp. D2 strain=D2 na latest Scaffold Major Full 2012-04-11 Bact_sp_D2_V2 Broad Institute GCA_000159075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/075/GCF_000159075.2_Bact_sp_D2_V2/ na na na haploid bacteria 6920457 6914757 41.500000 0 12 69 NCBI RefSeq GCF_000159075.2-RS_2025_01_08 2025-01-08 5251 5061 79 na GCF_000159095.1 PRJNA224116 SAMN00001448 ACGC00000000.1 na 525255 33036 Anaerococcus tetradius ATCC 35098 strain=ATCC 35098 na latest Scaffold Major Full 2009-05-01 ASM15909v1 Baylor College of Medicine GCA_000159095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/095/GCF_000159095.1_ASM15909v1/ na assembly from type material na haploid bacteria 2145347 2102984 34.000000 0 100 141 NCBI RefSeq GCF_000159095.1-RS_2026_05_16 2026-05-16 2094 1969 57 na GCF_000159115.1 PRJNA224116 SAMN00002226 ACGD00000000.1 na 525260 38284 Corynebacterium accolens ATCC 49725 strain=ATCC 49725 na latest Scaffold Major Full 2009-05-05 ASM15911v1 Baylor College of Medicine GCA_000159115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/115/GCF_000159115.1_ASM15911v1/ na assembly from type material na haploid bacteria 2437186 2413333 59.500000 0 38 64 NCBI RefSeq GCF_000159115.1-RS_2026_04_23 2026-04-23 2301 2191 56 na GCF_000159135.1 PRJNA224116 SAMN00001507 ACGE00000000.1 na 525268 43770 Corynebacterium striatum ATCC 6940 strain=ATCC 6940 na latest Scaffold Major Full 2009-05-05 ASM15913v1 Baylor College of Medicine GCA_000159135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/135/GCF_000159135.1_ASM15913v1/ na assembly from type material na haploid bacteria 2828991 2724288 59.500000 0 85 176 NCBI RefSeq GCF_000159135.1-RS_2026_05_16 2026-05-16 2652 2521 53 na GCF_000159155.2 PRJNA224116 SAMN00001462 na na 525284 2702 Gardnerella vaginalis ATCC 14019 strain=ATCC 14019 na latest Complete Genome Major Full 2010-11-03 ASM15915v2 Baylor College of Medicine GCA_000159155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/155/GCF_000159155.2_ASM15915v2/ na na na haploid bacteria 1667350 1667350 41.500000 1 1 1 NCBI RefSeq GCF_000159155.2-RS_2026_04_17 2026-04-17 1327 1212 54 20865041 GCF_000159175.1 PRJNA224116 SAMN00001468 ACGG00000000.1 na 525310 1588 Lentilactobacillus hilgardii ATCC 27305 strain=ATCC 27305 na latest Scaffold Major Full 2009-05-28 ASM15917v1 Baylor College of Medicine GCA_000159175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/175/GCF_000159175.1_ASM15917v1/ na na na haploid bacteria 3144656 3077715 40.000000 0 106 178 NCBI RefSeq GCF_000159175.1-RS_2025_08_05 2025-08-05 2947 2816 63 na GCF_000159215.1 PRJNA224116 SAMN00001473 ACGI00000000.1 na 525325 1613 Limosilactobacillus fermentum ATCC 14931 strain=ATCC 14931 na latest Scaffold Major Full 2009-05-28 ASM15921v1 Baylor College of Medicine GCA_000159215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/215/GCF_000159215.1_ASM15921v1/ na assembly from type material na haploid bacteria 1867005 1796949 53.000000 0 74 145 NCBI RefSeq GCF_000159215.1-RS_2025_08_06 2025-08-06 1861 1722 64 na GCF_000159235.2 PRJNA224116 SAMN00001474 ACGK00000000.2 na 525256 82135 Fannyhessea vaginae DSM 15829 strain=DSM 15829 na latest Contig Major Full 2011-04-05 ASM15923v2 Baylor College of Medecine GCA_000159235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/235/GCF_000159235.2_ASM15923v2/ na assembly from type material na haploid bacteria 1430526 1430526 42.500000 0 6 6 NCBI RefSeq GCF_000159235.2-RS_2025_12_03 2025-12-03 1213 1155 52 na GCF_000159255.1 PRJNA224116 SAMN00002243 ACGL00000000.1 na 491074 1351 Enterococcus faecalis TX0104 strain=TX0104 na latest Scaffold Major Full 2009-05-15 ASM15925v1 Baylor College of Medicine GCA_000159255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/255/GCF_000159255.1_ASM15925v1/ na na na haploid bacteria 3156478 3106826 37.500000 0 95 237 NCBI RefSeq GCF_000159255.1-RS_2026_01_21 2026-01-21 3167 2970 51 na GCF_000159275.1 PRJNA224116 SAMN00001498 ACGM00000000.1 na 525278 1351 Enterococcus faecalis TX1322 strain=TX1322 na latest Scaffold Major Full 2009-05-15 ASM15927v1 Baylor College of Medicine GCA_000159275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/275/GCF_000159275.1_ASM15927v1/ na na na haploid bacteria 2974288 2929290 37.500000 0 40 114 NCBI RefSeq GCF_000159275.1-RS_2026_02_15 2026-02-15 2905 2734 55 na GCF_000159295.1 PRJNA224116 SAMN00001495 ACGN00000000.1 na 525281 562 Escherichia coli 83972 strain=83972 na latest Scaffold Major Full 2009-05-15 ASM15929v1 Baylor College of Medicine GCA_000159295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/295/GCF_000159295.1_ASM15929v1/ na na na haploid bacteria 5106156 5066014 50.500000 0 105 159 NCBI RefSeq GCF_000159295.1-RS_2025_06_13 2025-06-13 4991 4633 80 na GCF_000159315.1 PRJNA224116 SAMN00001467 ACGP00000000.1 na 1423757 1588 Lentilactobacillus hilgardii DSM 20176 = ATCC 8290 strain=ATCC 8290 na latest Scaffold Major Full 2009-05-28 ASM15931v1 Baylor College of Medicine GCA_000159315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/315/GCF_000159315.1_ASM15931v1/ na assembly from type material na haploid bacteria 2721039 2619588 39.500000 0 113 233 NCBI RefSeq GCF_000159315.1-RS_2025_08_05 2025-08-05 2677 2494 62 na GCF_000159355.1 PRJNA224116 SAMN00001472 ACGR00000000.1 na 525330 33959 Lactobacillus johnsonii ATCC 33200 strain=ATCC 33200 na latest Scaffold Major Full 2009-05-28 ASM15935v1 BCM GCA_000159355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/355/GCF_000159355.1_ASM15935v1/ na assembly from type material na haploid bacteria 1780499 1772891 34.500000 0 32 52 NCBI RefSeq GCF_000159355.1-RS_2025_08_08 2025-08-08 1795 1644 57 na GCF_000159375.2 PRJNA224116 SAMN00001480 ACGS00000000.2 na 525362 1623 Ligilactobacillus ruminis ATCC 25644 strain=ATCC 25644 na latest Scaffold Major Full 2011-02-16 ASM15937v2 BCM GCA_000159375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/375/GCF_000159375.2_ASM15937v2/ na na na haploid bacteria 2108740 2103640 43.500000 0 7 58 NCBI RefSeq GCF_000159375.2-RS_2026_04_26 2026-04-26 2086 1979 63 na GCF_000159395.1 PRJNA224116 SAMN00001483 ACGT00000000.1 na 1423799 1624 Ligilactobacillus salivarius DSM 20555 = ATCC 11741 strain=ATCC 11741 na latest Scaffold Major Full 2009-06-26 ASM15939v1 Baylor College of Medicine GCA_000159395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/395/GCF_000159395.1_ASM15939v1/ na na na haploid bacteria 2017251 1995868 32.500000 0 32 54 NCBI RefSeq GCF_000159395.1-RS_2026_04_07 2026-04-07 1994 1893 70 na GCF_000159415.1 PRJNA224116 SAMN00001484 ACGU00000000.1 na 525365 227945 Lactobacillus ultunensis DSM 16047 strain=DSM 16047 na latest Scaffold Major Full 2009-06-26 ASM15941v1 BCM GCA_000159415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/415/GCF_000159415.1_ASM15941v1/ na assembly from type material na haploid bacteria 2248406 2168059 36.000000 0 48 116 NCBI RefSeq GCF_000159415.1-RS_2025_08_08 2025-08-08 2184 2033 62 na GCF_000159435.1 PRJNA224116 SAMN00001485 ACGV00000000.1 na 1423814 1633 Limosilactobacillus vaginalis DSM 5837 = ATCC 49540 strain=ATCC 49540 na latest Scaffold Major Full 2009-07-07 ASM15943v1 BCM GCA_000159435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/435/GCF_000159435.1_ASM15943v1/ na assembly from type material na haploid bacteria 1877332 1806246 40.500000 0 112 202 NCBI RefSeq GCF_000159435.1-RS_2025_09_10 2025-09-10 1887 1758 68 na GCF_000159455.2 PRJNA224116 SAMN00001494 na na 491077 1598 Limosilactobacillus reuteri SD2112 strain=SD2112 na latest Complete Genome Major Full 2011-06-20 ASM15945v2 Baylor College of Medicine GCA_000159455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/455/GCF_000159455.2_ASM15945v2/ na na na haploid bacteria 2316838 2316838 39.000000 5 5 5 NCBI RefSeq GCF_000159455.2-RS_2026_03_10 2026-03-10 2325 2119 92 na GCF_000159475.2 PRJNA224116 SAMN00001504 ACGX00000000.2 na 548485 1598 Limosilactobacillus reuteri MM4-1A strain=MM4-1A na latest Contig Major Full 2011-03-01 ASM15947v2 Human Microbiome Project GCA_000159475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/475/GCF_000159475.2_ASM15947v2/ na na na haploid bacteria 2067914 2067914 39.000000 0 7 7 NCBI RefSeq GCF_000159475.2-RS_2025_12_07 2025-12-07 2163 1976 117 na GCF_000159495.1 PRJNA224116 SAMN00001470 ACGY00000000.1 na 525337 1597 Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130 strain=ATCC 25302 na latest Scaffold Major Full 2009-05-28 ASM15949v1 Baylor College of Medicine GCA_000159495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/495/GCF_000159495.1_ASM15949v1/ na assembly from type material na haploid bacteria 2991737 2885587 46.500000 0 73 174 NCBI RefSeq GCF_000159495.1-RS_2025_08_05 2025-08-05 2870 2697 61 na GCF_000159515.1 PRJNA224116 SAMN00002244 ACHB00000000.1 na 525372 258 Sphingobacterium spiritivorum ATCC 33300 strain=ATCC 33300 na latest Scaffold Major Full 2009-05-15 ASM15951v1 BCM GCA_000159515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/515/GCF_000159515.1_ASM15951v1/ na na na haploid bacteria 5232948 5217816 40.000000 0 40 118 NCBI RefSeq GCF_000159515.1-RS_2025_12_07 2025-12-07 4728 4612 48 na GCF_000159535.2 PRJNA224116 SAMN00002240 na na 548473 1280 Staphylococcus aureus subsp. aureus TCH60 strain=MRSA_TCH60 na latest Complete Genome Major Full 2010-11-23 ASM15953v2 Baylor College of Medicine GCA_000159535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/535/GCF_000159535.2_ASM15953v2/ na na na haploid bacteria 2827166 2827166 33.000000 2 2 2 NCBI RefSeq GCF_000159535.2-RS_2026_03_09 2026-03-09 2791 2583 82 na GCF_000159555.1 PRJNA224116 SAMN00001490 ACHD00000000.1 na 548474 1280 Staphylococcus aureus subsp. aureus TCH130 strain=TCH130 na latest Scaffold Major Full 2009-08-12 ASM15955v1 BCM GCA_000159555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/555/GCF_000159555.1_ASM15955v1/ na na na haploid bacteria 2779997 2764312 33.000000 0 248 282 NCBI RefSeq GCF_000159555.1-RS_2025_01_09 2025-01-09 2894 2705 67 na GCF_000159575.1 PRJNA224116 SAMN00001492 ACHE00000000.1 na 525374 1282 Staphylococcus epidermidis BCM-HMP0060 strain=BCM-HMP0060 na latest Scaffold Major Full 2009-07-17 ASM15957v1 Baylor College of Medicine GCA_000159575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/575/GCF_000159575.1_ASM15957v1/ na na na haploid bacteria 2606024 2552746 32.000000 0 46 114 NCBI RefSeq GCF_000159575.1-RS_2025_08_05 2025-08-05 2507 2365 66 na GCF_000159595.1 PRJNA224116 SAMN00001463 ACHF00000000.1 na 548478 39791 Corynebacterium glucuronolyticum ATCC 51866 strain=ATCC 51866 na latest Scaffold Major Full 2009-05-05 ASM15959v1 Baylor College of Medicine GCA_000159595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/595/GCF_000159595.1_ASM15959v1/ na assembly from heterotypic synonym type material na haploid bacteria 2875263 2845468 59.000000 0 96 140 NCBI RefSeq GCF_000159595.1-RS_2026_03_31 2026-03-31 2613 2478 58 na GCF_000159615.1 PRJNA224116 SAMN00001503 ACHG00000000.1 na 525341 1598 Limosilactobacillus reuteri CF48-3A strain=CF48-3A na latest Scaffold Major Full 2009-07-07 ASM15961v1 BCM GCA_000159615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/615/GCF_000159615.1_ASM15961v1/ na na na haploid bacteria 2107903 2032595 38.500000 0 92 244 NCBI RefSeq GCF_000159615.1-RS_2025_09_10 2025-09-10 2150 1973 73 na GCF_000159635.1 PRJNA224116 SAMN00001476 ACHJ00000000.1 reference genome 525263 161889 Corynebacterium lipophiloflavum DSM 44291 strain=DSM 44291 na latest Scaffold Major Full 2009-05-05 ASM15963v1 Baylor College of Medicine GCA_000159635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/635/GCF_000159635.1_ASM15963v1/ na assembly from type material na haploid bacteria 2385784 2293743 65.000000 0 77 178 NCBI RefSeq GCF_000159635.1-RS_2026_05_01 2026-05-01 2355 2220 56 na GCF_000159655.1 PRJNA224116 SAMN00001464 ACHK00000000.1 na 525271 1351 Enterococcus faecalis ATCC 29200 strain=ATCC 29200 na latest Scaffold Major Full 2009-05-15 ASM15965v1 Baylor College of Medicine GCA_000159655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/655/GCF_000159655.1_ASM15965v1/ na na na haploid bacteria 2973369 2935863 37.500000 0 64 122 NCBI RefSeq GCF_000159655.1-RS_2026_02_15 2026-02-15 2902 2771 59 na GCF_000159675.1 PRJNA224116 SAMN00002238 ACHL00000000.1 na 525279 1352 Enterococcus faecium TX1330 strain=TX1330 na latest Scaffold Major Full 2009-05-15 ASM15967v1 Baylor College of Medicine GCA_000159675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/675/GCF_000159675.1_ASM15967v1/ na na na haploid bacteria 2777972 2721167 38.000000 0 38 156 NCBI RefSeq GCF_000159675.1-RS_2026_01_18 2026-01-18 2688 2526 63 na GCF_000159695.1 PRJNA224116 SAMN00001509 ACHM00000000.2 na 525282 1260 Finegoldia magna ATCC 53516 strain=ATCC 53516 na latest Chromosome Major Full 2010-06-17 ASM15969v1 Baylor College of Medicine GCA_000159695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/695/GCF_000159695.1_ASM15969v1/ na na na haploid bacteria 1916301 1908011 32.500000 1 1 3 NCBI RefSeq GCF_000159695.1-RS_2025_03_12 2025-03-12 1864 1786 54 na GCF_000159715.1 PRJNA224116 SAMN00001471 ACHN00000000.1 na 525306 1579 Lactobacillus acidophilus ATCC 4796 strain=ATCC 4796 na latest Scaffold Major Full 2009-05-28 ASM15971v1 Baylor College of Medicine GCA_000159715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/715/GCF_000159715.1_ASM15971v1/ na na na haploid bacteria 2020500 1999667 34.500000 0 38 69 NCBI RefSeq GCF_000159715.1-RS_2025_08_05 2025-08-05 1966 1772 65 na GCF_000159795.2 PRJNA224116 SAMN00002876 ACHS00000000.1 na 559736 56459 Xanthomonas vasicola pv. vasculorum NCPPB 702 strain=NCPPB 702 na latest Scaffold Minor Full 2015-09-14 ASM15979v2 The Sainsbury Laboratory GCA_000159795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/795/GCF_000159795.2_ASM15979v2/ na na na haploid bacteria 5333718 4867271 63.500000 0 96 483 NCBI RefSeq GCF_000159795.2-RS_2026_05_15 2026-05-15 4555 3999 152 20695894 GCF_000159835.2 PRJNA224116 SAMN00002878 ACHU00000000.2 na 573066 47877 Pseudomonas amygdali pv. tabaci str. ATCC 11528 strain=ATCC 11528 na latest Contig Major Full 2009-08-27 ASM15983v2 The Sainsbury Laboratory GCA_000159835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/835/GCF_000159835.2_ASM15983v2/ na na na haploid bacteria 6068411 6068411 58.000000 0 1405 1405 NCBI RefSeq GCF_000159835.2-RS_2026_01_15 2026-01-15 6376 5817 67 19703286 GCF_000159855.2 PRJNA224116 SAMN02463693 ACIB00000000.2 na 457392 457392 Bacteroides sp. 3_2_5 strain=3_2_5 na latest Scaffold Major Full 2012-04-11 Bact_sp_3_2_5_V2 Broad Institute GCA_000159855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/855/GCF_000159855.2_Bact_sp_3_2_5_V2/ na na na haploid bacteria 5116282 5115082 43.000000 0 5 17 NCBI RefSeq GCF_000159855.2-RS_2025_01_08 2025-01-08 4179 4033 73 na GCF_000159895.2 PRJNA224116 SAMN02463703 ACID00000000.2 na 457400 457400 Escherichia sp. 1_1_43 strain=1_1_43 na latest Scaffold Major Full 2012-09-19 Escherichia_sp_1_1_43_V2 Broad Institute GCA_000159895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/895/GCF_000159895.2_Escherichia_sp_1_1_43_V2/ na na na haploid bacteria 4836424 4708151 51.000000 0 47 174 NCBI RefSeq GCF_000159895.2-RS_2024_05_12 2024-05-12 4682 4370 89 na GCF_000159915.2 PRJNA224116 SAMN02463688 ACIE00000000.2 na 469618 856 Fusobacterium varium ATCC 27725 strain=ATCC 27725 na latest Scaffold Major Full 2011-07-27 Fuso_varium_ATCC_27725_V2 Broad Institute GCA_000159915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/915/GCF_000159915.2_Fuso_varium_ATCC_27725_V2/ na na na haploid bacteria 3299801 3297001 29.000000 0 11 39 NCBI RefSeq GCF_000159915.2-RS_2025_12_07 2025-12-07 3148 3020 76 na GCF_000159935.1 PRJNA224116 SAMN02595308 ACIG00000000.1 na 528348 485 Neisseria gonorrhoeae DGI2 strain=DGI2 na latest Scaffold Major Full 2010-03-12 ASM15993v1 Broad Institute GCA_000159935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/935/GCF_000159935.1_ASM15993v1/ na na na haploid bacteria 2175771 2093927 52.500000 1 38 134 NCBI RefSeq GCF_000159935.1-RS_2026_04_04 2026-04-04 2179 1913 55 na GCF_000159955.1 PRJNA224116 SAMN02463722 ACIH00000000.1 na 621372 652715 Paenibacillus sp. oral taxon 786 str. D14 strain=D14 na latest Scaffold Major Full 2009-07-08 ASM15995v1 Broad Institute GCA_000159955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/955/GCF_000159955.1_ASM15995v1/ na na na haploid bacteria 5097411 4872225 52.000000 0 75 300 NCBI RefSeq GCF_000159955.1-RS_2025_08_25 2025-08-25 4681 4473 76 na GCF_000159995.1 PRJNA224116 SAMN00008849 ACIJ00000000.2 reference genome 626522 76122 Alloprevotella tannerae ATCC 51259 strain=ATCC 51259 na latest Scaffold Major Full 2009-09-16 ASM15999v1 Washington University Genome Sequencing Center GCA_000159995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/995/GCF_000159995.1_ASM15999v1/ na assembly from type material na haploid bacteria 2585719 2582919 46.500000 0 6 34 NCBI RefSeq GCF_000159995.1-RS_2026_01_08 2026-01-08 2154 2006 53 na GCF_000160015.1 PRJNA224116 SAMN00008863 ACIK00000000.2 na 546273 39778 Veillonella dispar ATCC 17748 strain=ATCC 17748 na latest Scaffold Major Full 2009-05-08 ASM16001v1 Washington University Genome Sequencing Center GCA_000160015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/015/GCF_000160015.1_ASM16001v1/ na assembly from type material na haploid bacteria 2118767 2116567 39.000000 0 3 25 NCBI RefSeq GCF_000160015.1-RS_2026_04_07 2026-04-07 1988 1911 64 na GCF_000160035.2 PRJNA224116 SAMN02436865 ACIL00000000.3 reference genome 592026 43997 Catonella morbi ATCC 51271 strain=ATCC 51271 na latest Scaffold Major Full 2013-10-31 ASM16003v2 Washington University Genome Sequencing Center GCA_000160035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/035/GCF_000160035.2_ASM16003v2/ na assembly from type material na haploid bacteria 3479204 3477404 37.000000 0 8 26 NCBI RefSeq GCF_000160035.2-RS_2025_12_13 2025-12-13 3173 3059 61 na GCF_000160055.1 PRJNA224116 SAMN00008820 ACIM00000000.2 reference genome 592028 218538 Dialister invisus DSM 15470 strain=DSM 15470 na latest Scaffold Major Full 2009-08-21 ASM16005v1 Washington University Genome Sequencing Center GCA_000160055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/055/GCF_000160055.1_ASM16005v1/ na assembly from type material na haploid bacteria 1895960 1895860 45.500000 0 1 2 NCBI RefSeq GCF_000160055.1-RS_2026_04_04 2026-04-04 1808 1730 65 na GCF_000160075.2 PRJNA224116 SAMN02436801 ACIN00000000.3 na 592010 46125 Abiotrophia defectiva ATCC 49176 strain=ATCC 49176 na latest Scaffold Major Full 2013-10-31 ASM16007v2 Washington University Genome Sequencing Center GCA_000160075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/075/GCF_000160075.2_ASM16007v2/ na assembly from type material na haploid bacteria 2043439 2041839 47.000000 0 4 20 NCBI RefSeq GCF_000160075.2-RS_2025_12_23 2025-12-23 1912 1827 58 na GCF_000160095.1 PRJNA224116 SAMN00008805 ACIO00000000.1 na 566550 154046 Hungatella hathewayi DSM 13479 strain=DSM 13479 na latest Scaffold Major Full 2009-05-08 ASM16009v1 Washington University Genome Sequencing Center GCA_000160095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/095/GCF_000160095.1_ASM16009v1/ na assembly from type material na haploid bacteria 7163884 6626224 48.000000 0 714 1294 NCBI RefSeq GCF_000160095.1-RS_2026_06_16 2026-06-16 6780 6319 66 na GCF_000160115.1 PRJNA224116 SAMN00008860 ACIP00000000.2 reference genome 626523 177972 Shuttleworthella satelles DSM 14600 strain=DSM 14600 na latest Scaffold Major Full 2009-04-29 ASM16011v1 Washington University Genome Sequencing Center GCA_000160115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/115/GCF_000160115.1_ASM16011v1/ na assembly from type material na haploid bacteria 2169477 2168977 51.500000 0 5 10 NCBI RefSeq GCF_000160115.1-RS_2025_12_13 2025-12-13 1980 1881 65 na GCF_000160135.1 PRJNA224116 SAMN00008845 ACIQ00000000.2 na 608534 652706 Oribacterium sp. oral taxon 078 str. F0262 strain=F0262 na latest Scaffold Major Full 2009-11-19 ASM16013v1 Washington University Genome Sequencing Center GCA_000160135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/135/GCF_000160135.1_ASM16013v1/ na na na haploid bacteria 2676554 2672954 54.500000 0 12 48 NCBI RefSeq GCF_000160135.1-RS_2025_08_25 2025-08-25 2469 2338 63 na GCF_000160155.1 PRJNA224116 SAMN00002227 ACIX00000000.1 na 491075 1351 Enterococcus faecalis EnGen0297 strain=HH22 na latest Scaffold Major Full 2009-05-15 ASM16015v1 Baylor College of Medicine GCA_000160155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/155/GCF_000160155.1_ASM16015v1/ na na na haploid bacteria 3129930 3049822 37.000000 0 103 307 NCBI RefSeq GCF_000160155.1-RS_2026_01_22 2026-01-22 3131 2930 50 na GCF_000160175.1 PRJNA224116 SAMN00001479 ACIZ00000000.1 na 525361 47715 Lacticaseibacillus rhamnosus LMS2-1 strain=LMS2-1 na latest Scaffold Major Full 2009-06-26 ASM16017v1 Baylor College of Medicine GCA_000160175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/175/GCF_000160175.1_ASM16017v1/ na na na haploid bacteria 3159402 3108760 46.500000 0 55 159 NCBI RefSeq GCF_000160175.1-RS_2025_09_10 2025-09-10 2963 2825 63 na GCF_000160195.1 PRJNA224116 SAMN00001499 ACJA00000000.2 na 548470 1280 Staphylococcus aureus subsp. aureus MN8 strain=MN8 na latest Chromosome Major Full 2010-06-17 ASM16019v1 BCM GCA_000160195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/195/GCF_000160195.1_ASM16019v1/ na na na haploid bacteria 2899588 2882664 32.500000 1 1 5 NCBI RefSeq GCF_000160195.1-RS_2025_08_18 2025-08-18 2909 2727 67 na GCF_000160215.1 PRJNA224116 SAMN00002222 ACJB00000000.1 na 525378 29380 Staphylococcus caprae M23864:W1 strain=M23864:W1 na latest Scaffold Major Full 2009-07-17 ASM16021v1 Baylor College of Medicine GCA_000160215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/215/GCF_000160215.1_ASM16021v1/ na na na haploid bacteria 2629570 2609489 33.500000 0 26 76 NCBI RefSeq GCF_000160215.1-RS_2025_07_15 2025-07-15 2579 2451 58 na GCF_000160235.1 PRJNA224116 SAMN00002221 ACJC00000000.1 na 525376 1282 Staphylococcus epidermidis W23144 strain=W23144 na latest Scaffold Major Full 2009-07-17 ASM16023v1 Baylor College of Medicine GCA_000160235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/235/GCF_000160235.1_ASM16023v1/ na na na haploid bacteria 2646585 2579953 32.000000 0 91 192 NCBI RefSeq GCF_000160235.1-RS_2026_01_11 2026-01-11 2547 2389 58 na GCF_000160255.1 PRJNA224116 SAMN02595309 ACJJ00000000.1 na 575591 235 Brucella abortus NCTC 8038 strain=NCTC 8038 na latest Scaffold Major Full 2009-09-29 ASM16025v1 Broad Institute GCA_000160255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/255/GCF_000160255.1_ASM16025v1/ na na na haploid bacteria 3276866 3258337 57.000000 0 16 45 NCBI RefSeq GCF_000160255.1-RS_2026_05_17 2026-05-17 3209 2969 56 25212613 GCF_000160275.1 PRJNA224116 SAMN02595310 ACJK00000000.1 na 520488 29461 Brucella suis bv. 4 str. 40 strain=40 na latest Scaffold Major Full 2009-09-30 ASM16027v1 Broad Institute GCA_000160275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/275/GCF_000160275.1_ASM16027v1/ na na na haploid bacteria 3307260 3285085 57.500000 0 12 44 NCBI RefSeq GCF_000160275.1-RS_2025_08_08 2025-08-08 3200 3012 57 na GCF_000160295.1 PRJNA224116 SAMN02595311 ACJL00000000.1 na 224914 29459 Brucella melitensis bv. 1 str. 16M strain=16M na latest Scaffold Major Full 2009-09-30 ASM16029v1 Broad Institute GCA_000160295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/295/GCF_000160295.1_ASM16029v1/ na assembly from type material na haploid bacteria 3291248 3269159 57.000000 0 15 56 NCBI RefSeq GCF_000160295.1-RS_2026_04_17 2026-04-17 3231 2986 55 na GCF_000160315.2 PRJNA224116 SAMN02595312 ACJQ00000000.2 na 565664 1352 Enterococcus faecium C68 strain=C68 na latest Contig Major Full 2014-02-28 EFCM_C68_V3 Broad Institute GCA_000160315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/315/GCF_000160315.2_EFCM_C68_V3/ na na na haploid bacteria 2957107 2957107 38.000000 0 14 14 NCBI RefSeq GCF_000160315.2-RS_2026_01_14 2026-01-14 2961 2761 92 na GCF_000160335.2 PRJNA224116 SAMN00103091 na na 585143 1280 Staphylococcus aureus subsp. aureus 55/2053 strain=55/2053 na latest Complete Genome Major Full 2013-08-21 ASM16033v2 Broad Institute GCA_000160335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/335/GCF_000160335.2_ASM16033v2/ na na na haploid bacteria 2777368 2777368 33.000000 2 2 2 NCBI RefSeq GCF_000160335.2-RS_2025_01_09 2025-01-09 2763 2582 67 na GCF_000160355.1 PRJNA224116 SAMN02595313 ACJS00000000.1 na 585145 1280 Staphylococcus aureus subsp. aureus 65-1322 strain=65-1322 na latest Scaffold Major Full 2009-09-04 ASM16035v1 Broad Institute GCA_000160355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/355/GCF_000160355.1_ASM16035v1/ na na na haploid bacteria 2809741 2777290 33.000000 0 15 70 NCBI RefSeq GCF_000160355.1-RS_2025_08_18 2025-08-18 2793 2620 64 na GCF_000160375.1 PRJNA224116 SAMN02595314 ACJT00000000.1 na 585146 1280 Staphylococcus aureus subsp. aureus 68-397 strain=68-397 na latest Scaffold Major Full 2009-09-04 ASM16037v1 Broad Institute GCA_000160375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/375/GCF_000160375.1_ASM16037v1/ na na na haploid bacteria 2805834 2767646 33.000000 0 23 71 NCBI RefSeq GCF_000160375.1-RS_2025_01_09 2025-01-09 2799 2620 60 na GCF_000160395.1 PRJNA224116 SAMN02595315 ACJU00000000.1 na 585153 1280 Staphylococcus aureus subsp. aureus E1410 strain=E1410 na latest Scaffold Major Full 2009-09-04 ASM16039v1 Broad Institute GCA_000160395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/395/GCF_000160395.1_ASM16039v1/ na na na haploid bacteria 2838772 2810484 33.000000 0 17 56 NCBI RefSeq GCF_000160395.1-RS_2025_08_18 2025-08-18 2847 2667 64 na GCF_000160415.1 PRJNA224116 SAMN02595316 ACJV00000000.1 na 585158 1280 Staphylococcus aureus subsp. aureus M876 strain=M876 na latest Scaffold Major Full 2009-09-04 ASM16041v1 Broad Institute GCA_000160415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/415/GCF_000160415.1_ASM16041v1/ na na na haploid bacteria 2791311 2762708 33.000000 0 16 52 NCBI RefSeq GCF_000160415.1-RS_2025_08_18 2025-08-18 2783 2619 64 na GCF_000160435.1 PRJNA224116 SAMN00008832 ACJW00000000.2 na 629741 505 Kingella oralis ATCC 51147 strain=ATCC 51147 na latest Scaffold Major Full 2009-04-29 ASM16043v1 WUGSC GCA_000160435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/435/GCF_000160435.1_ASM16043v1/ na assembly from type material na haploid bacteria 2406675 2405975 54.500000 0 5 12 NCBI RefSeq GCF_000160435.1-RS_2026_05_16 2026-05-16 2635 2523 60 na GCF_000160455.2 PRJNA224116 SAMN00009040 ACJX00000000.3 reference genome 592015 649746 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain=OS1 na latest Contig Major Full 2015-11-12 ASM16045v2 The Genome Center GCA_000160455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/455/GCF_000160455.2_ASM16045v2/ na assembly from type material na haploid bacteria 2123925 2123925 46.500000 0 8 8 NCBI RefSeq GCF_000160455.2-RS_2025_12_09 2025-12-09 2129 2055 58 na GCF_000160475.1 PRJNA224116 SAMN00008828 ACJY00000000.1 reference genome 546275 860 Fusobacterium periodonticum ATCC 33693 strain=ATCC 33693 na latest Scaffold Major Full 2009-04-29 ASM16047v1 Washington University Genome Sequencing Center GCA_000160475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/475/GCF_000160475.1_ASM16047v1/ na assembly from type material na haploid bacteria 2615003 2567761 27.500000 0 53 143 NCBI RefSeq GCF_000160475.1-RS_2026_05_01 2026-05-01 2565 2389 57 na GCF_000160495.1 PRJNA224116 SAMN00008859 ACKP00000000.2 na 546271 69823 Selenomonas sputigena ATCC 35185 strain=ATCC 35185 na latest Scaffold Major Full 2009-08-21 ASM16049v1 Washington University Genome Sequencing Center GCA_000160495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/495/GCF_000160495.1_ASM16049v1/ na assembly designated as neotype na haploid bacteria 2559453 2553953 57.000000 0 6 61 NCBI RefSeq GCF_000160495.1-RS_2026_01_15 2026-01-15 2402 2313 66 na GCF_000160515.1 PRJNA224116 SAMN00002229 ACKR00000000.1 na 491076 47770 Lactobacillus crispatus JV-V01 strain=JV-V01 na latest Scaffold Major Full 2009-05-28 ASM16051v1 Baylor College of Medicine GCA_000160515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/515/GCF_000160515.1_ASM16051v1/ na na na haploid bacteria 2221719 2066562 37.000000 0 86 234 NCBI RefSeq GCF_000160515.1-RS_2026_03_31 2026-03-31 2171 1997 70 na GCF_000160535.1 PRJNA224116 SAMN00139193 ACKS00000000.1 reference genome 585502 242750 Hallella bergensis DSM 17361 strain=DSM 17361 na latest Scaffold Major Full 2009-10-08 ASM16053v1 Baylor College of Medicine GCA_000160535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/535/GCF_000160535.1_ASM16053v1/ na assembly from type material na haploid bacteria 3273670 3203233 47.500000 0 30 112 NCBI RefSeq GCF_000160535.1-RS_2026_03_12 2026-03-12 2608 2487 55 na GCF_000160555.1 PRJNA224116 SAMN00138948 ACKT00000000.1 reference genome 585503 135083 Centipeda noxia ATCC 43541 strain=ATCC 43541 na latest Scaffold Major Full 2010-03-23 ASM16055v1 Baylor College of Medicine GCA_000160555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/555/GCF_000160555.1_ASM16055v1/ na assembly from type material na haploid bacteria 2054993 2039467 56.000000 0 21 56 NCBI RefSeq GCF_000160555.1-RS_2026_05_16 2026-05-16 2003 1906 64 na GCF_000160575.1 PRJNA224116 SAMN00139194 ACKU00000000.1 na 585506 1249 Weissella paramesenteroides ATCC 33313 strain=ATCC 33313 na latest Scaffold Major Full 2009-07-17 ASM16057v1 Baylor College of Medicine GCA_000160575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/575/GCF_000160575.1_ASM16057v1/ na assembly from type material na haploid bacteria 1980223 1962173 38.000000 0 13 36 NCBI RefSeq GCF_000160575.1-RS_2026_03_17 2026-03-17 1993 1892 69 na GCF_000160595.1 PRJNA224116 SAMN00139187 ACKV00000000.1 na 586220 1245 Leuconostoc mesenteroides subsp. cremoris ATCC 19254 strain=ATCC 19254 na latest Scaffold Major Full 2009-07-07 ASM16059v1 Baylor College of Medicine GCA_000160595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/595/GCF_000160595.1_ASM16059v1/ na assembly from type material na haploid bacteria 1735074 1638511 38.000000 0 29 126 NCBI RefSeq GCF_000160595.1-RS_2026_04_26 2026-04-26 1764 1579 53 na GCF_000160615.1 PRJNA224116 SAMN00139192 ACKW00000000.1 na 585199 2052 Mobiluncus mulieris ATCC 35243 strain=ATCC 35243 na latest Scaffold Major Full 2009-05-15 ASM16061v1 Baylor College of Medicine GCA_000160615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/615/GCF_000160615.1_ASM16061v1/ na assembly from type material na haploid bacteria 2435166 2398290 55.000000 0 15 65 NCBI RefSeq GCF_000160615.1-RS_2026_05_16 2026-05-16 2149 2058 51 na GCF_000160635.1 PRJNA224116 SAMN00002241 ACKX00000000.1 na 585501 237576 Oribacterium sinus F0268 strain=F0268 na latest Scaffold Major Full 2009-05-15 ASM16063v1 Baylor College of Medicine GCA_000160635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/635/GCF_000160635.1_ASM16063v1/ na na na haploid bacteria 2706954 2628718 43.000000 0 43 250 NCBI RefSeq GCF_000160635.1-RS_2025_03_21 2025-03-21 2453 2319 47 na GCF_000160655.1 PRJNA224116 SAMN00120585 ACKY00000000.1 na 638300 2718 Cardiobacterium hominis ATCC 15826 strain=ATCC 15826 na latest Scaffold Major Full 2009-07-08 ASM16065v1 Baylor College of Medicine GCA_000160655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/655/GCF_000160655.1_ASM16065v1/ na assembly from type material na haploid bacteria 2642494 2578897 59.500000 0 26 142 NCBI RefSeq GCF_000160655.1-RS_2026_05_16 2026-05-16 2561 2424 54 na GCF_000160675.1 PRJNA224116 SAMN00139322 ACKZ00000000.1 na 638301 46124 Granulicatella adiacens ATCC 49175 strain=ATCC 49175 na latest Scaffold Major Full 2009-07-08 ASM16067v1 Baylor College of Medicine GCA_000160675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/675/GCF_000160675.1_ASM16067v1/ na assembly from type material na haploid bacteria 1947166 1923088 37.500000 0 10 31 NCBI RefSeq GCF_000160675.1-RS_2026_01_15 2026-01-15 1883 1825 31 na GCF_000160695.1 PRJNA224116 SAMN00189217 ACLA00000000.1 reference genome 638302 135080 Centipeda flueggei ATCC 43531 strain=ATCC 43531 na latest Scaffold Major Full 2009-07-08 ASM16069v1 Baylor College of Medicine GCA_000160695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/695/GCF_000160695.1_ASM16069v1/ na assembly from type material na haploid bacteria 2166063 2157862 56.000000 0 9 33 NCBI RefSeq GCF_000160695.1-RS_2026_05_01 2026-05-01 2129 2027 63 na GCF_000160715.1 PRJNA224116 SAMN00002242 ACLB00000000.1 na 585517 1598 Limosilactobacillus reuteri MM2-3 strain=MM2-3 na latest Scaffold Major Full 2009-07-07 ASM16071v1 Baylor College of Medicine GCA_000160715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/715/GCF_000160715.1_ASM16071v1/ na na na haploid bacteria 2015721 1943466 38.500000 0 95 167 NCBI RefSeq GCF_000160715.1-RS_2025_08_03 2025-08-03 2054 1915 72 na GCF_000160735.1 PRJNA224116 SAMN02436262 ACLC00000000.1 na 444612 444612 Rickettsia endosymbiont of Ixodes scapularis na REIS latest Chromosome Major Full 2009-06-15 ASM16073v1 JCVI GCA_000160735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/735/GCF_000160735.1_ASM16073v1/ na na na haploid bacteria 2100092 1981892 32.500000 5 20 135 NCBI RefSeq GCF_000160735.1-RS_2025_01_08 2025-01-08 2296 1847 40 22056929 GCF_000160755.1 PRJNA224116 SAMN00001486 ACLE00000000.1 na 525369 584 Proteus mirabilis ATCC 29906 strain=ATCC 29906 na latest Scaffold Major Full 2009-05-15 ASM16075v1 BCM GCA_000160755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/755/GCF_000160755.1_ASM16075v1/ na assembly from type material na haploid bacteria 4027100 3975048 38.500000 0 54 115 NCBI RefSeq GCF_000160755.1-RS_2026_05_18 2026-05-18 3722 3549 78 na GCF_000160775.2 PRJNA224116 SAMN00139180 ACLF00000000.3 reference genome 585531 219314 Aeromicrobium marinum DSM 15272 strain=DSM 15272 na latest Chromosome Major Full 2010-11-15 ASM16077v2 Baylor College of Medicine GCA_000160775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/775/GCF_000160775.2_ASM16077v2/ na assembly from type material na haploid bacteria 3079840 3078240 71.000000 1 1 16 NCBI RefSeq GCF_000160775.2-RS_2026_05_01 2026-05-01 3146 3075 52 na GCF_000160795.1 PRJNA224116 SAMN00139182 ACLI00000000.1 na 196164 152794 Corynebacterium efficiens YS-314 strain=YS-314 na latest Scaffold Major Full 2009-09-22 ASM16079v1 Baylor College of Medicine GCA_000160795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/795/GCF_000160795.1_ASM16079v1/ na assembly from type material na haploid bacteria 3190159 3113100 63.000000 0 40 137 NCBI RefSeq GCF_000160795.1-RS_2026_02_08 2026-02-08 2927 2792 62 na GCF_000160815.2 PRJNA224116 SAMN00189531 ACLK00000000.2 na 525280 1648 Erysipelothrix rhusiopathiae ATCC 19414 strain=ATCC 19414 na latest Contig Major Full 2011-02-07 ASM16081v2 BCM GCA_000160815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/815/GCF_000160815.2_ASM16081v2/ na assembly from type material na haploid bacteria 1746468 1746468 36.500000 0 4 4 NCBI RefSeq GCF_000160815.2-RS_2026_01_15 2026-01-15 1699 1613 76 na GCF_000160835.1 PRJNA224116 SAMN00001477 ACLL00000000.1 reference genome 525309 227943 Limosilactobacillus antri DSM 16041 strain=DSM 16041 na latest Scaffold Major Full 2009-09-22 ASM16083v1 Baylor College of Medicine GCA_000160835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/835/GCF_000160835.1_ASM16083v1/ na assembly from type material na haploid bacteria 2302896 2242444 51.000000 0 20 76 NCBI RefSeq GCF_000160835.1-RS_2026_03_30 2026-03-30 2207 2100 64 na GCF_000160855.1 PRJNA224116 SAMN00139430 ACLM00000000.1 na 585520 1587 Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 strain=DSM 20075 na latest Scaffold Major Full 2009-09-22 ASM16085v1 Baylor College of Medicine GCA_000160855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/855/GCF_000160855.1_ASM16085v1/ na assembly from type material na haploid bacteria 2020582 1808667 37.000000 0 49 235 NCBI RefSeq GCF_000160855.1-RS_2026_04_26 2026-04-26 1946 1683 52 na GCF_000160875.1 PRJNA224116 SAMN00139432 ACLN00000000.1 na 525328 147802 Lactobacillus iners DSM 13335 strain=DSM 13335 na latest Scaffold Major Full 2009-09-22 ASM16087v1 BCM GCA_000160875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/875/GCF_000160875.1_ASM16087v1/ na assembly from type material na haploid bacteria 1277649 1269321 32.500000 0 12 21 NCBI RefSeq GCF_000160875.1-RS_2026_05_16 2026-05-16 1247 1177 52 na GCF_000160895.1 PRJNA224116 SAMN00715886 ACLT00000000.1 na 526980 1396 Bacillus cereus ATCC 10876 strain=ATCC 10876 na latest Chromosome Major Full 2009-05-29 ASM16089v1 Naval Medical Research Center GCA_000160895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/895/GCF_000160895.1_ASM16089v1/ na na na haploid bacteria 5939023 5914523 35.000000 1 1 245 NCBI RefSeq GCF_000160895.1-RS_2026_05_29 2026-05-29 6124 5751 93 22645259 GCF_000160915.1 PRJNA224116 SAMN00727655 ACLU00000000.1 na 526970 1396 Bacillus cereus BGSC 6E1 strain=BGSC 6E1 na latest Chromosome Major Full 2009-05-29 ASM16091v1 Naval Medical Research Center GCA_000160915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/915/GCF_000160915.1_ASM16091v1/ na na na haploid bacteria 5730178 5709978 35.000000 1 1 202 NCBI RefSeq GCF_000160915.1-RS_2025_08_25 2025-08-25 5952 5595 86 22645259 GCF_000160935.1 PRJNA224116 SAMN00727633 ACLV00000000.1 na 526967 1396 Bacillus cereus 172560W strain=172560W na latest Chromosome Major Full 2009-05-29 ASM16093v1 Naval Medical Research Center GCA_000160935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/160/935/GCF_000160935.1_ASM16093v1/ na na na haploid bacteria 5699545 5684345 35.000000 1 1 152 NCBI RefSeq GCF_000160935.1-RS_2026_05_29 2026-05-29 5842 5501 87 22645259 GCF_000161035.1 PRJNA224116 SAMN00717296 ACMA00000000.1 na 526969 1396 Bacillus cereus m1550 strain=m1550 na latest Chromosome Major Full 2009-05-29 ASM16103v1 Naval Medical Research Center GCA_000161035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/035/GCF_000161035.1_ASM16103v1/ na na na haploid bacteria 5246493 5234093 35.000000 1 1 124 NCBI RefSeq GCF_000161035.1-RS_2025_08_08 2025-08-08 5421 5173 85 22645259 GCF_000161055.1 PRJNA224116 SAMN00727632 ACMB00000000.1 na 526974 1396 Bacillus cereus BDRD-ST24 strain=BDRD-ST24 na latest Chromosome Major Full 2009-05-29 ASM16105v1 Naval Medical Research Center GCA_000161055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/055/GCF_000161055.1_ASM16105v1/ na na na haploid bacteria 5436173 5417673 35.000000 1 1 185 NCBI RefSeq GCF_000161055.1-RS_2026_05_14 2026-05-14 5687 5400 97 22645259 GCF_000161115.1 PRJNA224116 SAMN00727651 ACME00000000.1 na 526978 1396 Bacillus cereus BDRD-Cer4 strain=BDRD-Cer4 na latest Chromosome Major Full 2009-05-29 ASM16111v1 Naval Medical Research Center GCA_000161115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/115/GCF_000161115.1_ASM16111v1/ na na na haploid bacteria 5397450 5385750 35.000000 1 1 117 NCBI RefSeq GCF_000161115.1-RS_2026_02_15 2026-02-15 5614 5343 104 22645259 GCF_000161135.1 PRJNA224116 SAMN00110498 ACMF00000000.1 na 526979 1396 Bacillus cereus 95/8201 strain=95/8201 na latest Chromosome Major Full 2009-05-29 ASM16113v1 Naval Medical Research Center GCA_000161135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/135/GCF_000161135.1_ASM16113v1/ na na na haploid bacteria 5584055 5561255 35.000000 1 1 228 NCBI RefSeq GCF_000161135.1-RS_2025_08_25 2025-08-25 5915 5587 94 22645259 GCF_000161155.1 PRJNA224116 SAMN00727650 ACMG00000000.1 na 526981 155322 Bacillus toyonensis Rock1-3 strain=Rock1-3 na latest Chromosome Major Full 2009-05-29 ASM16115v1 Naval Medical Research Center GCA_000161155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/155/GCF_000161155.1_ASM16115v1/ na na na haploid bacteria 5859854 5842754 35.000000 1 1 171 NCBI RefSeq GCF_000161155.1-RS_2026_04_10 2026-04-10 6011 5647 83 22645259 GCF_000161175.1 PRJNA224116 SAMN00727711 ACMH00000000.1 na 526982 1396 Bacillus cereus Rock1-15 strain=Rock1-15 na latest Chromosome Major Full 2009-05-29 ASM16117v1 Naval Medical Research Center GCA_000161175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/175/GCF_000161175.1_ASM16117v1/ na na na haploid bacteria 5766278 5746378 35.000000 1 1 199 NCBI RefSeq GCF_000161175.1-RS_2026_05_24 2026-05-24 6026 5733 105 22645259 GCF_000161255.1 PRJNA224116 SAMN00727713 ACML00000000.1 na 526986 1396 Bacillus cereus Rock3-44 strain=Rock3-44 na latest Chromosome Major Full 2009-05-29 ASM16125v1 Naval Medical Research Center GCA_000161255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/255/GCF_000161255.1_ASM16125v1/ na na na haploid bacteria 4999804 4894272 36.500000 1 1 1057 NCBI RefSeq GCF_000161255.1-RS_2025_07_21 2025-07-21 5518 5040 84 22645259 GCF_000161275.1 PRJNA224116 SAMN00727714 ACMM00000000.1 na 526987 1396 Bacillus cereus Rock4-2 strain=Rock4-2 na latest Chromosome Major Full 2009-05-29 ASM16127v1 Naval Medical Research Center GCA_000161275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/275/GCF_000161275.1_ASM16127v1/ na na na haploid bacteria 5769987 5737687 35.000000 1 1 323 NCBI RefSeq GCF_000161275.1-RS_2026_05_29 2026-05-29 6017 5575 46 22645259 GCF_000161315.1 PRJNA224116 SAMN00727647 ACMO00000000.1 na 526989 1396 Bacillus cereus F65185 strain=F65185 na latest Chromosome Major Full 2009-05-29 ASM16131v1 Naval Medical Research Center GCA_000161315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/315/GCF_000161315.1_ASM16131v1/ na na na haploid bacteria 6133179 6106479 34.500000 1 1 267 NCBI RefSeq GCF_000161315.1-RS_2026_05_29 2026-05-29 6324 5833 102 22645259 GCF_000161355.1 PRJNA224116 SAMN00727673 ACMQ00000000.1 na 526991 1396 Bacillus cereus AH676 strain=AH676 na latest Chromosome Major Full 2009-05-29 ASM16135v1 Naval Medical Research Center GCA_000161355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/355/GCF_000161355.1_ASM16135v1/ na na na haploid bacteria 5594747 5563247 35.000000 1 1 315 NCBI RefSeq GCF_000161355.1-RS_2026_06_30 2026-06-30 5826 5374 89 22645259 GCF_000161455.1 PRJNA224116 SAMN00727631 ACMX00000000.1 reference genome 527000 64104 Bacillus pseudomycoides DSM 12442 strain=DSM 12442 na latest Chromosome Major Full 2009-05-29 ASM16145v1 Naval Medical Research Center GCA_000161455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/455/GCF_000161455.1_ASM16145v1/ na assembly from type material na haploid bacteria 5782514 5752014 35.500000 1 1 305 NCBI RefSeq GCF_000161455.1-RS_2026_04_23 2026-04-23 6067 5522 95 22645259 GCF_000161495.1 PRJNA224116 SAMN00727629 ACMZ00000000.1 na 527021 1428 Bacillus thuringiensis Bt407 strain=Bt407 na latest Chromosome Major Full 2009-05-29 ASM16149v1 Naval Medical Research Center GCA_000161495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/495/GCF_000161495.1_ASM16149v1/ na na na haploid bacteria 6026843 6008143 35.000000 1 1 187 NCBI RefSeq GCF_000161495.1-RS_2026_02_15 2026-02-15 6549 6227 137 22645259 GCF_000161515.1 PRJNA224116 SAMN00717297 ACNA00000000.1 na 527025 1428 Bacillus thuringiensis serovar thuringiensis str. T01001 strain=T01001 na latest Chromosome Major Full 2009-05-29 ASM16151v1 Naval Medical Research Center GCA_000161515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/515/GCF_000161515.1_ASM16151v1/ na na na haploid bacteria 6323123 6298523 35.000000 1 1 246 NCBI RefSeq GCF_000161515.1-RS_2026_02_15 2026-02-15 6573 6232 96 22645259 GCF_000161555.1 PRJNA224116 SAMN00723189 ACNC00000000.1 na 527027 1428 Bacillus thuringiensis serovar pakistani str. T13001 strain=T13001 na latest Chromosome Major Full 2009-05-29 ASM16155v1 Naval Medical Research Center GCA_000161555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/555/GCF_000161555.1_ASM16155v1/ na na na haploid bacteria 6037513 5975813 35.000000 1 1 617 NCBI RefSeq GCF_000161555.1-RS_2026_05_27 2026-05-27 6511 5948 95 22645259 GCF_000161575.1 PRJNA224116 SAMN00717315 ACND00000000.1 na 527023 1428 Bacillus thuringiensis serovar kurstaki str. T03a001 strain=T03a001 na latest Chromosome Major Full 2009-05-29 ASM16157v1 Naval Medical Research Center GCA_000161575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/575/GCF_000161575.1_ASM16157v1/ na na na haploid bacteria 5527568 5493857 35.000000 1 1 338 NCBI RefSeq GCF_000161575.1-RS_2026_05_28 2026-05-28 5886 5514 97 22645259 GCF_000161595.1 PRJNA224116 SAMN00726690 ACNE00000000.1 na 527022 1428 Bacillus thuringiensis serovar monterrey BGSC 4AJ1 strain=BGSC 4AJ1 na latest Chromosome Major Full 2009-05-29 ASM16159v1 Naval Medical Research Center GCA_000161595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/595/GCF_000161595.1_ASM16159v1/ na na na haploid bacteria 6489024 6464024 34.500000 1 1 250 NCBI RefSeq GCF_000161595.1-RS_2025_08_25 2025-08-25 6784 6356 78 22645259 GCF_000161615.1 PRJNA224116 SAMN00738287 ACNF00000000.1 reference genome 527031 1428 Bacillus thuringiensis serovar berliner ATCC 10792 strain=ATCC 10792 na latest Chromosome Major Full 2009-05-29 ASM16161v1 Naval Medical Research Center GCA_000161615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/615/GCF_000161615.1_ASM16161v1/ na assembly from type material na haploid bacteria 6260142 6234842 35.000000 1 1 253 NCBI RefSeq GCF_000161615.1-RS_2026_03_30 2026-03-30 6498 6169 100 22645259 GCF_000161635.1 PRJNA224116 SAMN00727678 ACNG00000000.1 na 527032 1428 Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 strain=BGSC 4AW1 na latest Chromosome Major Full 2009-05-29 ASM16163v1 Naval Medical Research Center GCA_000161635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/635/GCF_000161635.1_ASM16163v1/ na na na haploid bacteria 5488844 5463144 35.000000 1 1 257 NCBI RefSeq GCF_000161635.1-RS_2025_03_19 2025-03-19 5823 5457 97 22645259 GCF_000161655.1 PRJNA224116 SAMN00727679 ACNH00000000.1 na 527029 1428 Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 strain=BGSC 4BA1 na latest Chromosome Major Full 2009-05-29 ASM16165v1 Naval Medical Research Center GCA_000161655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/655/GCF_000161655.1_ASM16165v1/ na na na haploid bacteria 6031475 6012975 35.000000 1 1 185 NCBI RefSeq GCF_000161655.1-RS_2025_08_14 2025-08-14 6347 6000 99 22645259 GCF_000161675.1 PRJNA224116 SAMN00727681 ACNI00000000.1 na 527030 1428 Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 strain=BGSC 4BD1 na latest Chromosome Major Full 2009-05-29 ASM16167v1 Naval Medical Research Center GCA_000161675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/675/GCF_000161675.1_ASM16167v1/ na na na haploid bacteria 6231196 6203396 34.500000 1 1 278 NCBI RefSeq GCF_000161675.1-RS_2025_08_25 2025-08-25 6328 5874 103 22645259 GCF_000161695.1 PRJNA224116 SAMN00727674 ACNJ00000000.1 na 527028 1428 Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 strain=BGSC 4CC1 na latest Chromosome Major Full 2009-05-29 ASM16169v1 Naval Medical Research Center GCA_000161695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/695/GCF_000161695.1_ASM16169v1/ na na na haploid bacteria 6002603 5976803 35.000000 1 1 258 NCBI RefSeq GCF_000161695.1-RS_2025_08_25 2025-08-25 6265 5880 91 22645259 GCF_000161715.1 PRJNA224116 SAMN00727642 ACNK00000000.1 na 527019 1428 Bacillus thuringiensis IBL 200 strain=IBL 200 na latest Chromosome Major Full 2009-05-29 ASM16171v1 Naval Medical Research Center GCA_000161715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/715/GCF_000161715.1_ASM16171v1/ na na na haploid bacteria 6731790 6707390 34.500000 1 1 244 NCBI RefSeq GCF_000161715.1-RS_2025_08_25 2025-08-25 6914 6387 81 22645259 GCF_000161735.1 PRJNA224116 SAMN00727641 ACNL00000000.1 na 527020 1428 Bacillus thuringiensis IBL 4222 strain=IBL 4222 na latest Chromosome Major Full 2009-05-29 ASM16173v1 Naval Medical Research Center GCA_000161735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/735/GCF_000161735.1_ASM16173v1/ na na na haploid bacteria 6612432 6574132 35.000000 1 1 383 NCBI RefSeq GCF_000161735.1-RS_2025_08_25 2025-08-25 7031 6585 107 22645259 GCF_000161775.1 PRJNA224116 SAMN02436218 ACNX00000000.1 na 644107 55218 Ruegeria lacuscaerulensis ITI-1157 strain=ITI-1157 na latest Scaffold Major Full 2009-10-02 ASM16177v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000161775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/775/GCF_000161775.1_ASM16177v1/ na assembly from type material na haploid bacteria 3523710 3515866 63.000000 0 2 47 NCBI RefSeq GCF_000161775.1-RS_2026_05_12 2026-05-12 3574 3415 63 na GCF_000161795.2 PRJNA224116 SAMN02436260 na na 166314 166314 Synechococcus sp. WH 8109 strain=WH 8109 na latest Complete Genome Major Full 2014-01-09 ASM16179v2 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000161795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/795/GCF_000161795.2_ASM16179v2/ na na na haploid bacteria 2111515 2111515 60.000000 1 1 1 NCBI RefSeq GCF_000161795.2-RS_2024_08_13 2024-08-13 2400 2319 53 na GCF_000161835.1 PRJNA224116 SAMN02436219 ACOA00000000.1 na 633131 633131 Thalassobium sp. R2A62 strain=R2A62 na latest Scaffold Major Full 2009-08-04 ASM16183v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000161835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/835/GCF_000161835.1_ASM16183v1/ na na na haploid bacteria 3487925 3487753 55.000000 0 1 8 NCBI RefSeq GCF_000161835.1-RS_2024_08_12 2024-08-12 3532 3354 53 na GCF_000161875.1 PRJNA224116 SAMN02595328 ACOC00000000.1 na 565639 1351 Enterococcus faecalis T8 strain=T8 na latest Scaffold Major Full 2009-08-27 ASM16187v1 Broad Institute GCA_000161875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/875/GCF_000161875.1_ASM16187v1/ na na na haploid bacteria 3037388 2985409 37.500000 0 24 115 NCBI RefSeq GCF_000161875.1-RS_2026_01_16 2026-01-16 2963 2798 56 na GCF_000161915.2 PRJNA224116 SAMN02463726 ACOG00000000.2 na 575596 47770 Lactobacillus crispatus MV-1A-US strain=MV-1A-US na latest Scaffold Major Full 2013-09-30 Lacto_cris_MV-1A-US_V2 Broad Institute GCA_000161915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/915/GCF_000161915.2_Lacto_cris_MV-1A-US_V2/ na na na haploid bacteria 2252504 2239204 37.000000 0 7 140 NCBI RefSeq GCF_000161915.2-RS_2026_01_30 2026-01-30 2468 2197 75 na GCF_000161935.1 PRJNA224116 SAMN02463725 ACOH00000000.1 na 575594 181675 Limosilactobacillus coleohominis 101-4-CHN strain=101-4-CHN na latest Scaffold Major Full 2009-08-27 ASM16193v1 Broad Institute GCA_000161935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/935/GCF_000161935.1_ASM16193v1/ na na na haploid bacteria 1725829 1704805 41.500000 0 12 35 NCBI RefSeq GCF_000161935.1-RS_2025_01_22 2025-01-22 1747 1628 64 na GCF_000161955.2 PRJNA224116 SAMN02463724 ACOI00000000.2 na 469609 469609 Streptococcus sp. 2_1_36FAA strain=2_1_36FAA na latest Scaffold Major Full 2013-09-30 Strept_sp_2_1_36FAA_V2 Broad Institute GCA_000161955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/955/GCF_000161955.2_Strept_sp_2_1_36FAA_V2/ na na na haploid bacteria 2231411 2230611 40.500000 0 5 13 NCBI RefSeq GCF_000161955.2-RS_2025_08_25 2025-08-25 2214 2101 57 na GCF_000161995.1 PRJNA224116 SAMN00008831 ACOO00000000.2 reference genome 645512 428712 Jonquetella anthropi E3_33 E1 strain=E3_33 E1 na latest Scaffold Major Full 2009-07-22 ASM16199v1 WUGSC GCA_000161995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/161/995/GCF_000161995.1_ASM16199v1/ na na na haploid bacteria 1790058 1786558 59.000000 0 2 37 NCBI RefSeq GCF_000161995.1-RS_2025_12_16 2025-12-16 1742 1667 61 na GCF_000162015.1 PRJNA224116 SAMN00008827 ACOP00000000.2 na 411483 411483 Faecalibacterium duncaniae strain=A2-165 na latest Scaffold Major Full 2009-07-22 ASM16201v1 Washington University Genome Sequencing Center GCA_000162015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/015/GCF_000162015.1_ASM16201v1/ na assembly from type material na haploid bacteria 3090349 3080849 56.500000 0 20 115 NCBI RefSeq GCF_000162015.1-RS_2026_05_13 2026-05-13 3096 2881 80 na GCF_000162035.1 PRJNA224116 SAMN02463728 ACPK00000000.1 na 575585 471 Acinetobacter calcoaceticus RUH2202 strain=RUH2202 na latest Scaffold Major Full 2009-10-30 ASM16203v1 Broad Institute GCA_000162035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/035/GCF_000162035.1_ASM16203v1/ na na na haploid bacteria 3881790 3849663 38.500000 0 15 81 NCBI RefSeq GCF_000162035.1-RS_2025_12_22 2025-12-22 3697 3556 70 23144699 GCF_000162055.1 PRJNA224116 SAMN02463729 ACPL00000000.1 na 575586 40214 Acinetobacter johnsonii SH046 strain=SH046 na latest Scaffold Major Full 2009-11-02 ASM16205v1 Broad Institute GCA_000162055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/055/GCF_000162055.1_ASM16205v1/ na na na haploid bacteria 3690010 3561713 41.000000 0 47 188 NCBI RefSeq GCF_000162055.1-RS_2025_08_04 2025-08-04 3521 3285 75 23144699 GCF_000162075.1 PRJNA224116 SAMN02463730 ACPM00000000.1 na 575587 40215 Acinetobacter junii SH205 strain=SH205 na latest Scaffold Major Full 2009-11-02 ASM16207v1 Broad Institute GCA_000162075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/075/GCF_000162075.1_ASM16207v1/ na na na haploid bacteria 3463059 3338932 38.500000 0 44 176 NCBI RefSeq GCF_000162075.1-RS_2025_12_22 2025-12-22 3298 3085 70 23144699 GCF_000162095.1 PRJNA224116 SAMN02463731 ACPN00000000.1 na 575588 28090 Acinetobacter lwoffii SH145 strain=SH145 na latest Scaffold Major Full 2009-11-02 ASM16209v1 Broad Institute GCA_000162095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/095/GCF_000162095.1_ASM16209v1/ na na na haploid bacteria 3481004 3347001 42.500000 0 76 250 NCBI RefSeq GCF_000162095.1-RS_2026_03_30 2026-03-30 3279 3043 72 23144699 GCF_000162115.1 PRJNA224116 SAMN02463732 ACPO00000000.1 na 575589 40216 Acinetobacter radioresistens SH164 strain=SH164 na latest Scaffold Major Full 2009-11-02 ASM16211v1 Broad Institute GCA_000162115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/115/GCF_000162115.1_ASM16211v1/ na na na haploid bacteria 3158014 3137175 41.500000 0 18 52 NCBI RefSeq GCF_000162115.1-RS_2025_12_22 2025-12-22 2990 2874 68 23144699 GCF_000162155.1 PRJNA224116 SAMN02463734 ACPQ00000000.1 na 469588 469588 Bacteroides sp. 2_1_22 strain=2_1_22 na latest Scaffold Major Full 2009-11-03 ASM16215v1 Broad Institute GCA_000162155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/155/GCF_000162155.1_ASM16215v1/ na na na haploid bacteria 6003748 5912968 42.000000 0 36 133 NCBI RefSeq GCF_000162155.1-RS_2024_08_13 2024-08-13 4691 4518 72 na GCF_000162215.1 PRJNA224116 SAMN02463737 ACPT00000000.1 na 585543 585543 Bacteroides sp. D20 strain=D20 na latest Scaffold Major Full 2009-12-04 ASM16221v1 Broad Institute GCA_000162215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/215/GCF_000162215.1_ASM16221v1/ na na na haploid bacteria 4487454 4452514 46.500000 0 15 62 NCBI RefSeq GCF_000162215.1-RS_2025_01_08 2025-01-08 3629 3517 67 na GCF_000162235.2 PRJNA224116 SAMN02463738 na na 469604 155615 Fusobacterium vincentii 3_1_36A2 strain=3_1_36A2 na latest Complete Genome Major Full 2013-08-27 ASM16223v2 Broad Institute GCA_000162235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/235/GCF_000162235.2_ASM16223v2/ na na na haploid bacteria 2268272 2268272 27.000000 1 1 1 NCBI RefSeq GCF_000162235.2-RS_2026_04_14 2026-04-14 2202 2089 65 na GCF_000162255.1 PRJNA224116 SAMN02463740 ACPV00000000.1 na 575595 47770 Lactobacillus crispatus 125-2-CHN strain=125-2-CHN na latest Scaffold Major Full 2009-08-26 ASM16225v1 Broad Institute GCA_000162255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/255/GCF_000162255.1_ASM16225v1/ na na na haploid bacteria 2305246 2130375 36.500000 0 30 171 NCBI RefSeq GCF_000162255.1-RS_2026_01_30 2026-01-30 2184 2048 63 na GCF_000162275.1 PRJNA224116 SAMN02463739 ACPW00000000.1 na 563193 563193 Parabacteroides sp. D13 strain=D13 na latest Scaffold Major Full 2009-08-27 ASM16227v1 Broad Institute GCA_000162275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/275/GCF_000162275.1_ASM16227v1/ na na na haploid bacteria 5370710 5327234 45.000000 0 22 74 NCBI RefSeq GCF_000162275.1-RS_2025_01_08 2025-01-08 4564 4408 70 na GCF_000162295.1 PRJNA224116 SAMN02463741 ACQB00000000.1 na 575584 470 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain=ATCC 19606 na latest Scaffold Major Full 2009-10-02 ASM16229v1 Broad Institute GCA_000162295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/295/GCF_000162295.1_ASM16229v1/ na na na haploid bacteria 3971516 3934095 39.000000 0 22 100 NCBI RefSeq GCF_000162295.1-RS_2026_01_22 2026-01-22 3811 3646 71 23144699 GCF_000162315.1 PRJNA224116 SAMN02463743 ACQC00000000.1 na 575597 47770 Lactobacillus crispatus MV-3A-US strain=MV-3A-US na latest Scaffold Major Full 2009-10-05 ASM16231v1 Broad Institute GCA_000162315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/315/GCF_000162315.1_ASM16231v1/ na na na haploid bacteria 2437083 2285213 36.500000 0 76 220 NCBI RefSeq GCF_000162315.1-RS_2026_01_30 2026-01-30 2430 2257 62 na GCF_000162335.1 PRJNA224116 SAMN02463744 ACQD00000000.1 na 575607 109790 Lactobacillus jensenii SJ-7A-US strain=SJ-7A-US na latest Scaffold Major Full 2009-10-05 ASM16233v1 Broad Institute GCA_000162335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/335/GCF_000162335.1_ASM16233v1/ na na na haploid bacteria 1722751 1676721 34.000000 0 17 75 NCBI RefSeq GCF_000162335.1-RS_2026_01_30 2026-01-30 1704 1612 56 na GCF_000162355.2 PRJNA224116 SAMN02463746 ACQE00000000.2 na 469603 76859 Fusobacterium animalis 3_1_33 strain=3_1_33 na latest Scaffold Major Full 2013-09-30 Fuso_sp_3_1_33_V2 Broad Institute GCA_000162355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/355/GCF_000162355.2_Fuso_sp_3_1_33_V2/ na na na haploid bacteria 2302090 2291720 27.000000 0 5 18 NCBI RefSeq GCF_000162355.2-RS_2026_04_15 2026-04-15 2174 2065 68 na GCF_000162375.2 PRJNA224116 SAMN02463742 ACQF00000000.2 na 575564 575564 Acinetobacter sp. RUH 2624 strain=RUH2624 na latest Scaffold Major Full 2013-09-30 Acin_sp_RUH2624_V1 Broad Institute GCA_000162375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/375/GCF_000162375.2_Acin_sp_RUH2624_V1/ na na na haploid bacteria 3952634 3905683 38.500000 0 8 49 NCBI RefSeq GCF_000162375.2-RS_2024_05_07 2024-05-07 3775 3570 79 23144699 GCF_000162395.1 PRJNA224116 SAMN02463745 ACQG00000000.1 na 575599 1613 Limosilactobacillus fermentum 28-3-CHN strain=28-3-CHN na latest Scaffold Major Full 2009-10-05 ASM16239v1 Broad Institute GCA_000162395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/395/GCF_000162395.1_ASM16239v1/ na na na haploid bacteria 2026518 1958292 52.000000 0 42 112 NCBI RefSeq GCF_000162395.1-RS_2026_04_01 2026-04-01 2014 1878 60 na GCF_000162415.1 PRJNA224116 SAMN02595329 ACQH00000000.1 na 575615 652721 Prevotella sp. oral taxon 317 str. F0108 strain=F0108 na latest Scaffold Major Full 2010-02-04 ASM16241v1 Broad Institute GCA_000162415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/415/GCF_000162415.1_ASM16241v1/ na na na haploid bacteria 4099098 3994572 47.000000 0 61 205 NCBI RefSeq GCF_000162415.1-RS_2025_01_08 2025-01-08 2993 2828 52 na GCF_000162455.1 PRJNA224116 SAMN02463748 ACRB00000000.1 na 575611 28126 Segatella buccae D17 strain=D17 na latest Scaffold Major Full 2010-02-04 ASM16245v1 Broad Institute GCA_000162455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/455/GCF_000162455.1_ASM16245v1/ na na na haploid bacteria 3357950 3297980 51.000000 0 84 264 NCBI RefSeq GCF_000162455.1-RS_2025_12_04 2025-12-04 2690 2549 51 na GCF_000162475.2 PRJNA224116 SAMN02595330 ACRF00000000.2 na 626369 137732 Granulicatella elegans ATCC 700633 strain=ATCC 700633 na latest Scaffold Major Full 2013-09-30 Gran_ele_ATCC_700633_V2 Broad Institute GCA_000162475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/475/GCF_000162475.2_Gran_ele_ATCC_700633_V2/ na assembly from type material na haploid bacteria 1743361 1741661 33.500000 0 1 18 NCBI RefSeq GCF_000162475.2-RS_2025_12_10 2025-12-10 1635 1561 41 na GCF_000162495.1 PRJNA224116 SAMN02463755 ACRK00000000.1 na 563037 563037 Streptococcus sp. M143 strain=M143 na latest Scaffold Major Full 2009-12-04 ASM16249v1 Broad Institute GCA_000162495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/495/GCF_000162495.1_ASM16249v1/ na na na haploid bacteria 1880978 1872891 41.000000 0 13 28 NCBI RefSeq GCF_000162495.1-RS_2025_08_25 2025-08-25 1866 1756 53 na GCF_000162515.1 PRJNA224116 SAMN02463759 ACRP00000000.1 na 469585 469585 Bacteroides sp. 1_1_14 strain=1_1_14 na latest Scaffold Major Full 2010-06-14 ASM16251v1 Broad Institute GCA_000162515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/515/GCF_000162515.1_ASM16251v1/ na na na haploid bacteria 6446424 6387953 43.500000 0 57 189 NCBI RefSeq GCF_000162515.1-RS_2024_05_24 2024-05-24 5162 4721 75 na GCF_000162555.1 PRJNA224116 SAMN02463761 ACRS00000000.1 na 457390 457390 Bacteroides sp. 3_1_23 strain=3_1_23 na latest Scaffold Major Full 2010-06-17 ASM16255v1 Broad Institute GCA_000162555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/555/GCF_000162555.1_ASM16255v1/ na na na haploid bacteria 6520178 6489887 41.500000 0 20 87 NCBI RefSeq GCF_000162555.1-RS_2025_01_08 2025-01-08 5004 4806 85 na GCF_000162575.1 PRJNA224116 SAMN00004577 ACSF00000000.1 reference genome 537970 123841 Helicobacter canadensis MIT 98-5491 strain=MIT 98-5491 na latest Chromosome Major Full 2009-08-05 ASM16257v1 Helicobacter canadensis MIT 98-5491 Sequence Consortium GCA_000162575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/575/GCF_000162575.1_ASM16257v1/ na assembly from type material na haploid bacteria 1623845 1622996 33.500000 1 1 4 NCBI RefSeq GCF_000162575.1-RS_2026_03_20 2026-03-20 1624 1546 53 19542273 GCF_000162595.1 PRJNA224116 SAMN02595338 ACSP00000000.1 na 585149 1280 Staphylococcus aureus subsp. aureus C101 strain=C101 na latest Scaffold Major Full 2009-12-29 ASM16259v1 Broad Institute GCA_000162595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/595/GCF_000162595.1_ASM16259v1/ na na na haploid bacteria 2806194 2781692 32.500000 0 21 53 NCBI RefSeq GCF_000162595.1-RS_2025_08_18 2025-08-18 2806 2644 64 na GCF_000162615.1 PRJNA224116 SAMN02595339 ACSQ00000000.1 na 585151 1280 Staphylococcus aureus subsp. aureus C427 strain=C427 na latest Scaffold Major Full 2009-12-29 ASM16261v1 Broad Institute GCA_000162615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/615/GCF_000162615.1_ASM16261v1/ na na na haploid bacteria 2891845 2861691 32.500000 0 18 54 NCBI RefSeq GCF_000162615.1-RS_2025_01_09 2025-01-09 2913 2726 63 22535928 GCF_000162635.1 PRJNA224116 SAMN02595340 ACSR00000000.1 na 585152 1280 Staphylococcus aureus subsp. aureus D139 strain=D139 na latest Scaffold Major Full 2009-12-29 ASM16263v1 Broad Institute GCA_000162635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/635/GCF_000162635.1_ASM16263v1/ na na na haploid bacteria 2829512 2795023 32.500000 0 31 97 NCBI RefSeq GCF_000162635.1-RS_2025_01_09 2025-01-09 2858 2627 65 na GCF_000162655.1 PRJNA224116 SAMN02595341 ACSS00000000.1 na 585155 1280 Staphylococcus aureus subsp. aureus H19 strain=H19 na latest Scaffold Major Full 2010-01-07 ASM16265v1 Broad Institute GCA_000162655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/655/GCF_000162655.1_ASM16265v1/ na na na haploid bacteria 2807924 2783181 32.500000 0 13 63 NCBI RefSeq GCF_000162655.1-RS_2025_08_18 2025-08-18 2816 2598 61 na GCF_000162675.1 PRJNA224116 SAMN02595342 ACST00000000.1 na 585156 1280 Staphylococcus aureus subsp. aureus M1015 strain=M1015 na latest Scaffold Major Full 2010-03-11 ASM16267v1 Broad Institute GCA_000162675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/675/GCF_000162675.1_ASM16267v1/ na na na haploid bacteria 2785837 2764225 33.000000 0 20 48 NCBI RefSeq GCF_000162675.1-RS_2025_01_09 2025-01-09 2787 2623 64 na GCF_000162695.1 PRJNA224116 SAMN02595343 ACSU00000000.1 na 585159 1280 Staphylococcus aureus subsp. aureus M899 strain=M899 na latest Scaffold Major Full 2009-12-29 ASM16269v1 Broad Institute GCA_000162695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/695/GCF_000162695.1_ASM16269v1/ na na na haploid bacteria 2787974 2768593 33.000000 0 18 45 NCBI RefSeq GCF_000162695.1-RS_2025_08_18 2025-08-18 2782 2620 64 na GCF_000162715.1 PRJNA224116 SAMN02595344 ACSV00000000.1 na 585160 1280 Staphylococcus aureus subsp. aureus WBG10049 strain=WBG10049 na latest Scaffold Major Full 2009-12-29 ASM16271v1 Broad Institute GCA_000162715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/715/GCF_000162715.1_ASM16271v1/ na na na haploid bacteria 2800799 2777175 32.500000 0 12 38 NCBI RefSeq GCF_000162715.1-RS_2025_08_18 2025-08-18 2760 2606 64 na GCF_000162735.1 PRJNA224116 SAMN02595345 ACSW00000000.1 na 585161 1280 Staphylococcus aureus subsp. aureus WW2703/97 strain=WW2703/97 na latest Scaffold Major Full 2009-12-29 ASM16273v1 Broad Institute GCA_000162735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/735/GCF_000162735.1_ASM16273v1/ na na na haploid bacteria 2804748 2743583 32.500000 0 36 151 NCBI RefSeq GCF_000162735.1-RS_2025_01_09 2025-01-09 2792 2581 54 na GCF_000162755.2 PRJNA224116 SAMN02471332 ACUL00000000.2 reference genome 658187 168933 Legionella drancourtii LLAP12 strain=LLAP12 na latest Scaffold Major Full 2011-12-15 ASM16275v2 Unite de Recherche sur les Maladies Infectieuses et Tropicales Emergentes CNRS-IRD UMR 6236, Marcel, France GCA_000162755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/755/GCF_000162755.2_ASM16275v2/ na assembly from type material na haploid bacteria 4152613 4070090 39.000000 0 58 213 NCBI RefSeq GCF_000162755.2-RS_2025_12_09 2025-12-09 3734 3543 41 22047552 GCF_000162775.1 PRJNA224116 SAMN02595349 ACUR00000000.1 na 645465 645465 Streptomyces sp. e14 strain=e14 na latest Scaffold Major Full 2010-04-01 ASM16277v1 Broad Institute GCA_000162775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/775/GCF_000162775.1_ASM16277v1/ na na na haploid bacteria 7928946 7146196 72.500000 0 13 716 NCBI RefSeq GCF_000162775.1-RS_2025_08_25 2025-08-25 6588 5821 79 na GCF_000162795.1 PRJNA224116 SAMN02595350 ACUS00000000.1 na 585157 1280 Staphylococcus aureus subsp. aureus M809 strain=M809 na latest Scaffold Major Full 2010-03-24 ASM16279v1 Broad Institute GCA_000162795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/795/GCF_000162795.1_ASM16279v1/ na na na haploid bacteria 2798364 2770328 32.500000 0 27 85 NCBI RefSeq GCF_000162795.1-RS_2025_08_18 2025-08-18 2802 2624 48 na GCF_000162815.1 PRJNA224116 SAMN02595351 ACUT00000000.1 na 585144 1280 Staphylococcus aureus subsp. aureus 58-424 strain=58-424 na latest Scaffold Major Full 2010-03-16 ASM16281v1 Broad Institute GCA_000162815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/815/GCF_000162815.1_ASM16281v1/ na na na haploid bacteria 2828372 2798503 33.000000 0 23 79 NCBI RefSeq GCF_000162815.1-RS_2025_08_18 2025-08-18 2854 2648 71 na GCF_000162835.1 PRJNA224116 SAMN02595352 ACUU00000000.1 na 585148 1280 Staphylococcus aureus subsp. aureus Btn1260 strain=Btn1260 na latest Scaffold Major Full 2009-12-29 ASM16283v1 Broad Institute GCA_000162835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/835/GCF_000162835.1_ASM16283v1/ na na na haploid bacteria 2799248 2780206 32.500000 0 17 51 NCBI RefSeq GCF_000162835.1-RS_2025_01_09 2025-01-09 2797 2605 72 na GCF_000162855.1 PRJNA224116 SAMN02595353 ACUV00000000.1 na 585150 1280 Staphylococcus aureus subsp. aureus C160 strain=C160 na latest Scaffold Major Full 2009-12-30 ASM16285v1 Broad Institute GCA_000162855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/855/GCF_000162855.1_ASM16285v1/ na na na haploid bacteria 2843444 2822646 32.500000 0 26 63 NCBI RefSeq GCF_000162855.1-RS_2025_08_18 2025-08-18 2890 2683 75 22535928 GCF_000162875.1 PRJNA224116 SAMN00008861 ACUX00000000.2 na 649764 84109 Slackia exigua ATCC 700122 strain=ATCC 700122 na latest Scaffold Major Full 2009-09-16 ASM16287v1 WUGSC GCA_000162875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/875/GCF_000162875.1_ASM16287v1/ na assembly from type material na haploid bacteria 2096289 2094589 62.000000 0 2 19 NCBI RefSeq GCF_000162875.1-RS_2025_12_23 2025-12-23 1772 1708 56 na GCF_000162915.1 PRJNA224116 SAMN00008848 ACUZ00000000.2 na 649760 28135 Segatella oris F0302 strain=F0302 na latest Scaffold Major Full 2009-10-02 ASM16291v1 WUGSC GCA_000162915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/915/GCF_000162915.1_ASM16291v1/ na na na haploid bacteria 3251636 3244736 44.000000 0 18 87 NCBI RefSeq GCF_000162915.1-RS_2025_12_03 2025-12-03 2774 2588 63 na GCF_000162935.1 PRJNA224116 SAMN00008850 ACVA00000000.1 na 649761 28137 Prevotella veroralis F0319 strain=F0319 na latest Scaffold Major Full 2009-08-21 ASM16293v1 WUGSC GCA_000162935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/935/GCF_000162935.1_ASM16293v1/ na na na haploid bacteria 2993935 2986735 42.000000 0 26 98 NCBI RefSeq GCF_000162935.1-RS_2025_12_03 2025-12-03 2576 2378 65 na GCF_000162955.1 PRJNA224116 SAMN00008833 ACVB00000000.2 na 634994 157688 Leptotrichia hofstadii F0254 strain=F0254 na latest Scaffold Major Full 2009-09-16 ASM16295v1 WUGSC GCA_000162955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/955/GCF_000162955.1_ASM16295v1/ na na na haploid bacteria 2456453 2453253 31.000000 0 10 42 NCBI RefSeq GCF_000162955.1-RS_2026_02_08 2026-02-08 2710 2507 63 na GCF_000162975.1 PRJNA224116 SAMN02471107 ACVS00000000.2 na 478433 1773 Mycobacterium tuberculosis KZN 4207 strain=KZN 4207 na latest Chromosome Major Full 2010-06-04 ASM16297v1 Texas A&M University GCA_000162975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/975/GCF_000162975.1_ASM16297v1/ na na na haploid bacteria 4397373 4383889 65.500000 1 1 66 NCBI RefSeq GCF_000162975.1-RS_2025_05_23 2025-05-23 4211 3946 51 19890396 GCF_000162995.1 PRJNA224116 SAMN02471090 ACVT00000000.2 na 663887 1773 Mycobacterium tuberculosis KZN V2475 strain=KZN V2475 na latest Chromosome Major Full 2010-06-08 ASM16299v1 Texas A&M University GCA_000162995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/162/995/GCF_000162995.1_ASM16299v1/ na na na haploid bacteria 4397242 4356247 65.500000 1 1 88 NCBI RefSeq GCF_000162995.1-RS_2025_05_23 2025-05-23 4220 3948 51 19890396 GCF_000163015.1 PRJNA224116 SAMN02471040 ACVU00000000.2 na 663886 1773 Mycobacterium tuberculosis KZN R506 strain=KZN R506 na latest Chromosome Major Full 2010-06-08 ASM16301v1 Texas A&M University GCA_000163015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/015/GCF_000163015.1_ASM16301v1/ na na na haploid bacteria 4397243 4367532 65.500000 1 1 81 NCBI RefSeq GCF_000163015.1-RS_2025_05_22 2025-05-22 4222 3938 51 19890396 GCF_000163035.1 PRJNA224116 SAMN02463806 ACWY00000000.1 na 575612 28132 Prevotella melaninogenica D18 strain=D18 na latest Scaffold Major Full 2010-02-04 ASM16303v1 Broad Institute GCA_000163035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/035/GCF_000163035.1_ASM16303v1/ na na na haploid bacteria 3292341 3213441 41.000000 0 46 173 NCBI RefSeq GCF_000163035.1-RS_2025_12_04 2025-12-04 2589 2431 52 na GCF_000163055.2 PRJNA224116 SAMN02463807 na na 575614 652716 Prevotella sp. oral taxon 299 str. F0039 strain=F0039 na latest Complete Genome Major Full 2013-08-21 ASM16305v2 Broad Institute GCA_000163055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/055/GCF_000163055.2_ASM16305v2/ na na na haploid bacteria 2480269 2480269 37.500000 2 2 2 NCBI RefSeq GCF_000163055.2-RS_2024_08_13 2024-08-13 2014 1923 64 na GCF_000163095.1 PRJNA224116 SAMN02463809 ACXB00000000.1 na 563194 1254 Pediococcus acidilactici 7_4 strain=7_4 na latest Scaffold Major Full 2009-12-04 ASM16309v1 Broad Institute GCA_000163095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/095/GCF_000163095.1_ASM16309v1/ na na na haploid bacteria 2017988 2010555 42.000000 0 9 28 NCBI RefSeq GCF_000163095.1-RS_2026_01_30 2026-01-30 1985 1890 57 na GCF_000163115.1 PRJNA224116 SAMN02595354 ACXC00000000.1 na 520453 235 Brucella abortus bv. 5 str. B3196 strain=B3196 na latest Scaffold Major Full 2010-05-28 ASM16311v1 Broad Institute GCA_000163115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/115/GCF_000163115.1_ASM16311v1/ na na na haploid bacteria 3343441 3308461 57.000000 0 48 130 NCBI RefSeq GCF_000163115.1-RS_2026_05_17 2026-05-17 3312 3042 57 na GCF_000163135.1 PRJNA224116 SAMN02595355 ACXD00000000.1 na 520448 520448 Brucella sp. NVSL 07-0026 strain=NVSL 07-0026 na latest Scaffold Major Full 2010-04-16 ASM16313v1 Broad Institute GCA_000163135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/135/GCF_000163135.1_ASM16313v1/ na na na haploid bacteria 3297137 3265363 57.000000 0 17 87 NCBI RefSeq GCF_000163135.1-RS_2024_08_22 2024-08-22 3253 2838 57 na GCF_000163155.1 PRJNA224116 SAMN02595356 ACXE00000000.1 na 550672 562 Escherichia coli B088 strain=B088 na latest Scaffold Major Full 2010-03-22 ASM16315v1 Broad Institute GCA_000163155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/155/GCF_000163155.1_ASM16315v1/ na na na haploid bacteria 4993477 4944201 50.500000 0 37 148 NCBI RefSeq GCF_000163155.1-RS_2025_06_13 2025-06-13 4929 4630 99 na GCF_000163175.1 PRJNA224116 SAMN02595357 ACXF00000000.1 na 550676 562 Escherichia coli B185 strain=B185 na latest Scaffold Major Full 2010-03-23 ASM16317v1 Broad Institute GCA_000163175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/175/GCF_000163175.1_ASM16317v1/ na na na haploid bacteria 5144306 5106858 50.500000 0 44 115 NCBI RefSeq GCF_000163175.1-RS_2025_06_13 2025-06-13 4989 4716 101 na GCF_000163195.1 PRJNA224116 SAMN02595358 ACXG00000000.1 na 550677 562 Escherichia coli B354 strain=B354 na latest Scaffold Major Full 2010-03-24 ASM16319v1 Broad Institute GCA_000163195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/195/GCF_000163195.1_ASM16319v1/ na na na haploid bacteria 4853778 4831934 50.500000 0 22 69 NCBI RefSeq GCF_000163195.1-RS_2025_06_13 2025-06-13 4685 4467 100 na GCF_000163215.1 PRJNA224116 SAMN02595359 ACXH00000000.1 na 656379 562 Escherichia coli FVEC1302 strain=FVEC1302 na latest Scaffold Major Full 2010-06-14 ASM16321v1 Broad Institute GCA_000163215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/215/GCF_000163215.1_ASM16321v1/ na na na haploid bacteria 5339642 5291786 50.500000 0 50 149 NCBI RefSeq GCF_000163215.1-RS_2025_06_13 2025-06-13 5323 4841 96 na GCF_000163235.1 PRJNA224116 SAMN02595360 ACXI00000000.1 na 656380 562 Escherichia coli FVEC1412 strain=FVEC1412 na latest Scaffold Major Full 2010-03-23 ASM16323v1 Broad Institute GCA_000163235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/235/GCF_000163235.1_ASM16323v1/ na na na haploid bacteria 5234178 5194603 50.500000 0 49 137 NCBI RefSeq GCF_000163235.1-RS_2025_06_13 2025-06-13 5195 4760 103 na GCF_000163255.1 PRJNA224116 SAMN00002867 ACXS00000000.1 na 665027 47877 Pseudomonas amygdali pv. aesculi str. NCPPB 3681 strain=NCPPB 3681 na latest Scaffold Major Full 2009-09-02 ASM16325v1 The Sainsbury Laboratory GCA_000163255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/255/GCF_000163255.1_ASM16325v1/ na na na haploid bacteria 5896164 5836346 58.500000 0 557 841 NCBI RefSeq GCF_000163255.1-RS_2026_01_23 2026-01-23 5667 5187 50 20419105 GCF_000163275.1 PRJNA224116 SAMN02471154 ACXT00000000.1 na 666475 47877 Pseudomonas amygdali pv. aesculi str. 2250 strain=2250 na latest Scaffold Major Full 2009-09-02 ASM16327v1 The Sainsbury Laboratory GCA_000163275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/275/GCF_000163275.1_ASM16327v1/ na na na haploid bacteria 5985027 5926327 58.500000 0 364 776 NCBI RefSeq GCF_000163275.1-RS_2026_01_23 2026-01-23 5654 5195 49 20419105 GCF_000163295.1 PRJNA224116 SAMN00120584 ACXU00000000.1 na 655811 33037 Anaerococcus vaginalis ATCC 51170 strain=ATCC 51170 na latest Scaffold Major Full 2009-09-03 ASM16329v1 Baylor College of Medicine GCA_000163295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/295/GCF_000163295.1_ASM16329v1/ na assembly from type material na haploid bacteria 1891767 1875286 29.000000 0 6 28 NCBI RefSeq GCF_000163295.1-RS_2025_12_23 2025-12-23 1796 1723 53 na GCF_000163335.1 PRJNA224116 SAMN02595362 ACYP00000000.1 na 585147 1280 Staphylococcus aureus subsp. aureus A017934/97 strain=A017934/97 na latest Scaffold Major Full 2010-01-12 ASM16333v1 Broad Institute GCA_000163335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/335/GCF_000163335.1_ASM16333v1/ na na na haploid bacteria 2819319 2801838 32.500000 0 20 55 NCBI RefSeq GCF_000163335.1-RS_2025_08_18 2025-08-18 2836 2631 78 na GCF_000163355.2 PRJNA224116 SAMN00189091 ACYQ00000000.2 na 525243 470 Acinetobacter baumannii 6013150 strain=6013150 na latest Scaffold Major Full 2011-05-13 ASM16335v2 WUGSC GCA_000163355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/355/GCF_000163355.2_ASM16335v2/ na na na haploid bacteria 3987238 3987118 39.000000 0 202 214 NCBI RefSeq GCF_000163355.2-RS_2026_02_02 2026-02-02 3890 3751 29 na GCF_000163375.2 PRJNA224116 SAMN00189090 ACYR00000000.2 na 592014 470 Acinetobacter baumannii 6013113 strain=6013113 na latest Scaffold Major Full 2011-05-13 ASM16337v2 WUGSC GCA_000163375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/375/GCF_000163375.2_ASM16337v2/ na na na haploid bacteria 3999041 3993307 39.000000 0 118 230 NCBI RefSeq GCF_000163375.2-RS_2026_02_04 2026-02-04 3946 3766 56 na GCF_000163395.2 PRJNA224116 SAMN00189092 ACYS00000000.2 na 525242 470 Acinetobacter baumannii 6014059 strain=6014059 na latest Scaffold Major Full 2011-05-13 ASM16339v2 WUGSC GCA_000163395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/395/GCF_000163395.2_ASM16339v2/ na na na haploid bacteria 3878813 3874368 39.000000 0 143 209 NCBI RefSeq GCF_000163395.2-RS_2025_12_22 2025-12-22 3838 3656 61 na GCF_000163415.1 PRJNA224116 SAMN00008754 ACYT00000000.2 na 649742 1660 Schaalia odontolytica F0309 strain=F0309 na latest Scaffold Major Full 2010-04-09 ASM16341v1 WUGSC GCA_000163415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/415/GCF_000163415.1_ASM16341v1/ na na na haploid bacteria 2431995 2422895 65.000000 0 6 97 NCBI RefSeq GCF_000163415.1-RS_2025_06_07 2025-06-07 2179 2062 60 na GCF_000163435.1 PRJNA224116 SAMN00001506 ACYW00000000.1 na 525262 38289 Corynebacterium jeikeium ATCC 43734 strain=ATCC 43734 na latest Scaffold Major Full 2009-09-22 ASM16343v1 BCM GCA_000163435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/435/GCF_000163435.1_ASM16343v1/ na assembly from type material na haploid bacteria 2492821 2426461 61.500000 0 21 93 NCBI RefSeq GCF_000163435.1-RS_2026_05_16 2026-05-16 2220 2119 56 na GCF_000163455.1 PRJNA224116 SAMN00120581 ACZD00000000.1 na 667127 573 Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 strain=ATCC 13884 na latest Scaffold Major Full 2009-09-24 ASM16345v1 Baylor College of Medicine GCA_000163455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/455/GCF_000163455.1_ASM16345v1/ na assembly from type material na haploid bacteria 5450034 5280012 57.000000 0 51 264 NCBI RefSeq GCF_000163455.1-RS_2025_02_19 2025-02-19 5467 4894 71 na GCF_000163475.1 PRJNA224116 SAMN00120578 ACZR00000000.1 na 667128 754 Pasteurella dagmatis ATCC 43325 strain=ATCC 43325 na latest Scaffold Major Full 2009-10-08 ASM16347v1 Baylor College of Medicine GCA_000163475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/475/GCF_000163475.1_ASM16347v1/ na assembly from type material na haploid bacteria 2263252 2246267 37.500000 0 14 28 NCBI RefSeq GCF_000163475.1-RS_2026_05_16 2026-05-16 2078 2004 56 na GCF_000163535.1 PRJNA224116 SAMN02595364 ADAA00000000.1 na 528351 485 Neisseria gonorrhoeae F62 strain=F62 na latest Scaffold Major Full 2010-03-26 ASM16353v1 Broad Institute GCA_000163535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/535/GCF_000163535.1_ASM16353v1/ na na na haploid bacteria 2158438 2116615 52.500000 0 59 134 NCBI RefSeq GCF_000163535.1-RS_2026_01_10 2026-01-10 2282 1942 55 na GCF_000163575.1 PRJNA224116 SAMN02595365 ADAT00000000.1 na 585154 1280 Staphylococcus aureus subsp. aureus EMRSA16 strain=EMRSA16 na latest Scaffold Major Full 2010-04-23 ASM16357v1 Broad Institute GCA_000163575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/575/GCF_000163575.1_ASM16357v1/ na na na haploid bacteria 2902614 2879203 32.500000 0 26 70 NCBI RefSeq GCF_000163575.1-RS_2025_08_18 2025-08-18 2930 2720 72 na GCF_000163595.1 PRJNA224116 SAMN00120576 ADBY00000000.1 na 667129 618 Serratia odorifera DSM 4582 strain=DSM 4582 na latest Scaffold Major Full 2010-03-30 ASM16359v1 Baylor College of Medicine GCA_000163595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/595/GCF_000163595.1_ASM16359v1/ na assembly from type material na haploid bacteria 5267389 5125678 56.000000 0 33 91 NCBI RefSeq GCF_000163595.1-RS_2026_04_23 2026-04-23 4942 4691 83 na GCF_000163615.3 PRJNA224116 SAMN02604275 na na 694569 714 Aggregatibacter actinomycetemcomitans D7S-1 strain=D7S-1 na latest Complete Genome Minor Full 2016-06-27 ASM16361v3 University of Washington Department of Microbiology GCA_000163615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/615/GCF_000163615.3_ASM16361v3/ na na na haploid bacteria 2308962 2308962 44.500000 1 1 1 NCBI RefSeq GCF_000163615.3-RS_2026_01_06 2026-01-06 2285 2097 77 20348265;26420795 GCF_000163635.1 PRJNA224116 SAMN02463817 ADCH00000000.1 na 575565 575565 Acinetobacter sp. SH024 strain=SH024 na latest Scaffold Major Full 2010-04-01 ASM16363v1 Broad Institute GCA_000163635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/635/GCF_000163635.1_ASM16363v1/ na na na haploid bacteria 3970841 3938017 38.500000 0 26 89 NCBI RefSeq GCF_000163635.1-RS_2025_02_24 2025-02-24 3840 3674 77 23144699 GCF_000163675.1 PRJNA224116 SAMN02463819 ADCK00000000.1 na 585544 585544 Bacteroides sp. D22 strain=D22 na latest Scaffold Major Full 2010-06-14 ASM16367v1 Broad Institute GCA_000163675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/675/GCF_000163675.1_ASM16367v1/ na na na haploid bacteria 6344045 6291714 42.000000 0 94 226 NCBI RefSeq GCF_000163675.1-RS_2025_01_08 2025-01-08 5161 4857 82 na GCF_000163715.1 PRJNA224116 SAMN02463830 ADCV00000000.1 na 457416 457416 Veillonella sp. 3_1_44 strain=3_1_44 na latest Scaffold Major Full 2010-04-08 ASM16371v1 Broad Institute GCA_000163715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/715/GCF_000163715.1_ASM16371v1/ na na na haploid bacteria 2163458 2156561 38.500000 0 16 31 NCBI RefSeq GCF_000163715.1-RS_2024_08_13 2024-08-13 1977 1890 67 na GCF_000163735.1 PRJNA224116 SAMN02463831 ADCW00000000.1 na 450749 450749 Veillonella sp. 6_1_27 strain=6_1_27 na latest Scaffold Major Full 2010-04-08 ASM16373v1 Broad Institute GCA_000163735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/735/GCF_000163735.1_ASM16373v1/ na na na haploid bacteria 2174425 2169785 38.500000 0 10 22 NCBI RefSeq GCF_000163735.1-RS_2024_08_13 2024-08-13 1982 1911 64 na GCF_000163755.1 PRJNA224116 SAMN02463832 ADCX00000000.1 na 641146 78259 Scardovia inopinata F0304 strain=F0304 na latest Scaffold Major Full 2010-04-08 ASM16375v1 Broad Institute GCA_000163755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/755/GCF_000163755.1_ASM16375v1/ na na na haploid bacteria 1804013 1801055 48.500000 0 9 20 NCBI RefSeq GCF_000163755.1-RS_2026_02_08 2026-02-08 1543 1456 58 na GCF_000163775.2 PRJNA224116 SAMN02463833 ADCY00000000.2 na 641147 72 Simonsiella muelleri ATCC 29453 strain=ATCC 29453 na latest Scaffold Major Full 2012-09-19 Simo_muel_ATCC_29453_V2 Broad Institute GCA_000163775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/775/GCF_000163775.2_Simo_muel_ATCC_29453_V2/ na assembly from type material na haploid bacteria 2372614 2343541 41.500000 0 29 82 NCBI RefSeq GCF_000163775.2-RS_2026_05_16 2026-05-16 2374 2237 69 na GCF_000163795.1 PRJNA224116 SAMN00189102 ADDP00000000.1 na 699185 1351 Enterococcus faecalis S613 strain=S613 na latest Scaffold Major Full 2010-01-29 ASM16379v1 Wash U GCA_000163795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/795/GCF_000163795.1_ASM16379v1/ na na na haploid bacteria 3047348 3042101 37.500000 0 105 145 NCBI RefSeq GCF_000163795.1-RS_2026_01_14 2026-01-14 3012 2890 46 na GCF_000163815.1 PRJNA224116 SAMN00189101 ADDQ00000000.1 na 699186 1351 Enterococcus faecalis R712 strain=R712 na latest Scaffold Major Full 2010-01-29 ASM16381v1 WashU GCA_000163815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/815/GCF_000163815.1_ASM16381v1/ na na na haploid bacteria 3039544 3036838 37.500000 0 105 132 NCBI RefSeq GCF_000163815.1-RS_2026_01_15 2026-01-15 3016 2892 46 na GCF_000163835.1 PRJNA224116 SAMN02463844 ADEB00000000.1 na 641144 78258 Parascardovia denticolens F0305 strain=F0305 na latest Scaffold Major Full 2010-04-09 Paras_denticolens_F0305 Broad Institute GCA_000163835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/835/GCF_000163835.1_Paras_denticolens_F0305/ na na na haploid bacteria 1897118 1891123 58.500000 0 9 26 NCBI RefSeq GCF_000163835.1-RS_2025_12_03 2025-12-03 1620 1529 56 na GCF_000163855.1 PRJNA224116 SAMN02469315 ADEK00000000.1 na 536227 217159 Clostridium carboxidivorans P7 strain=P7 na latest Scaffold Major Full 2010-05-14 ASM16385v1 Mississippi State University GCA_000163855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/855/GCF_000163855.1_ASM16385v1/ na na na haploid bacteria 4407967 4404367 29.500000 0 33 69 NCBI RefSeq GCF_000163855.1-RS_2026_02_18 2026-02-18 4127 3924 60 20729368 GCF_000163895.2 PRJNA224116 SAMN02463683 na reference genome 546269 143361 Filifactor alocis ATCC 35896 strain=ATCC 35896 na latest Complete Genome Major Full 2011-01-27 ASM16389v2 Broad Institute GCA_000163895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/895/GCF_000163895.2_ASM16389v2/ na assembly from type material na haploid bacteria 1931012 1931012 35.500000 1 1 1 NCBI RefSeq GCF_000163895.2-RS_2025_12_13 2025-12-13 1738 1659 63 na GCF_000163915.2 PRJNA224116 SAMN02463816 na na 469602 155615 Fusobacterium vincentii 3_1_27 strain=3_1_27 na latest Complete Genome Major Full 2014-02-07 ASM16391v2 Broad Institute GCA_000163915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/915/GCF_000163915.2_ASM16391v2/ na na na haploid bacteria 2190228 2190228 27.000000 3 3 3 NCBI RefSeq GCF_000163915.2-RS_2026_04_15 2026-04-15 2071 1945 64 na GCF_000163935.1 PRJNA224116 SAMN02463706 ADGG00000000.1 na 469621 860 Fusobacterium periodonticum 1_1_41FAA strain=1_1_41FAA na latest Scaffold Major Full 2010-04-09 ASM16393v1 Broad Institute GCA_000163935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/935/GCF_000163935.1_ASM16393v1/ na na na haploid bacteria 2479455 2454647 28.000000 0 31 80 NCBI RefSeq GCF_000163935.1-RS_2024_12_31 2024-12-31 2472 2306 63 na GCF_000163955.1 PRJNA224116 SAMN00000732 ADGK00000000.1 na 500638 636 Edwardsiella tarda ATCC 23685 strain=ATCC 23685 na latest Scaffold Major Full 2010-01-29 ASM16395v1 Washington University Genome Sequencing Center GCA_000163955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/955/GCF_000163955.1_ASM16395v1/ na na na haploid bacteria 3744568 3631524 57.000000 0 87 372 NCBI RefSeq GCF_000163955.1-RS_2026_01_30 2026-01-30 3608 3354 110 na GCF_000163975.1 PRJNA224116 SAMN02471182 ADGL00000000.1 na 683082 197 Campylobacter jejuni subsp. jejuni 1336 strain=1336 na latest Chromosome Major Full 2010-01-15 ASM16397v1 University of Liverpool GCA_000163975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/163/975/GCF_000163975.1_ASM16397v1/ na na na haploid bacteria 1702833 1674540 30.000000 1 1 35 NCBI RefSeq GCF_000163975.1-RS_2025_06_28 2025-06-28 1778 1623 46 21418497 GCF_000164015.3 PRJNA224116 SAMN02471367 na na 693985 29438 Pseudomonas savastanoi pv. savastanoi NCPPB 3335 strain=NCPPB 3335 na latest Complete Genome Major Full 2017-03-31 ASM16401v3 University of Wisconsin-Madison GCA_000164015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/015/GCF_000164015.3_ASM16401v3/ na na na haploid bacteria 6016828 6016828 58.000000 1 1 1 NCBI RefSeq GCF_000164015.3-RS_2026_03_31 2026-03-31 5533 5074 80 20370821;32714356 GCF_000164035.1 PRJNA224116 SAMN00120564 ADMS00000000.1 na 742159 72556 Achromobacter piechaudii ATCC 43553 strain=ATCC 43553 na latest Scaffold Major Full 2010-04-09 ASM16403v1 Baylor College of Medicine GCA_000164035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/035/GCF_000164035.1_ASM16403v1/ na na na haploid bacteria 6154438 6071093 64.500000 0 26 152 NCBI RefSeq GCF_000164035.1-RS_2026_02_06 2026-02-06 5676 5473 60 na GCF_000164055.1 PRJNA224116 SAMN00113594 ADMT00000000.1 na 707232 29430 Acinetobacter haemolyticus ATCC 19194 strain=ATCC 19194 na latest Scaffold Major Full 2010-04-09 ASM16405v1 Baylor College of Medicine GCA_000164055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/055/GCF_000164055.1_ASM16405v1/ na na na haploid bacteria 3715198 3372344 39.500000 0 61 253 NCBI RefSeq GCF_000164055.1-RS_2025_12_22 2025-12-22 3336 3092 67 na GCF_000164075.1 PRJNA224116 SAMN02299424 ADMU00000000.1 na 525375 1282 Staphylococcus epidermidis M23864:W2(grey) strain=M23864:W2(grey) na latest Scaffold Major Full 2010-03-23 ASM16407v1 Baylor College of Medicine GCA_000164075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/075/GCF_000164075.1_ASM16407v1/ na na na haploid bacteria 2523347 2485341 32.000000 0 13 63 NCBI RefSeq GCF_000164075.1-RS_2026_01_10 2026-01-10 2435 2315 65 na GCF_000164095.1 PRJNA224116 SAMN00120580 ADMV00000000.1 na 655813 1303 Streptococcus oralis ATCC 35037 strain=ATCC 35037 na latest Scaffold Major Full 2010-03-23 ASM16409v1 Baylor College of Medicine GCA_000164095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/095/GCF_000164095.1_ASM16409v1/ na assembly from type material na haploid bacteria 1913838 1904282 41.500000 0 10 24 NCBI RefSeq GCF_000164095.1-RS_2026_03_16 2026-03-16 1844 1774 38 na GCF_000164115.1 PRJNA224116 SAMN00189098 ADNS00000000.1 na 649754 1697 Corynebacterium ammoniagenes DSM 20306 strain=DSM 20306 na latest Scaffold Major Full 2010-05-26 ASM16411v1 WUGSC GCA_000164115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/115/GCF_000164115.1_ASM16411v1/ na assembly from type material na haploid bacteria 2764167 2763612 55.500000 0 26 34 NCBI RefSeq GCF_000164115.1-RS_2026_05_16 2026-05-16 2543 2461 52 na GCF_000164135.1 PRJNA224116 SAMN00189881 ADNV00000000.1 reference genome 525368 240125 Mycobacterium parascrofulaceum ATCC BAA-614 strain=ATCC BAA-614 na latest Scaffold Major Full 2010-05-13 ASM16413v1 Baylor College of Medicine GCA_000164135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/135/GCF_000164135.1_ASM16413v1/ na assembly from type material na haploid bacteria 6564171 6295508 68.500000 0 124 405 NCBI RefSeq GCF_000164135.1-RS_2026_04_23 2026-04-23 6248 5896 52 na GCF_000164155.2 PRJNA224116 SAMN00001487 ADNW00000000.2 na 525370 43767 Prescottella equi ATCC 33707 strain=ATCC 33707 na latest Chromosome Major Full 2011-03-15 ASM16415v2 BCM GCA_000164155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/155/GCF_000164155.2_ASM16415v2/ na na na haploid bacteria 5259057 5255557 69.000000 1 1 35 NCBI RefSeq GCF_000164155.2-RS_2026_02_02 2026-02-02 4980 4866 71 na GCF_000164175.1 PRJNA224116 SAMN00001466 ADNX00000000.1 na 525259 1496 Clostridioides difficile NAP08 strain=NAP08 na latest Scaffold Major Full 2010-05-21 ASM16417v1 BCM GCA_000164175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/175/GCF_000164175.1_ASM16417v1/ na na na haploid bacteria 4078686 4021616 29.000000 0 24 110 NCBI RefSeq GCF_000164175.1-RS_2026_03_01 2026-03-01 3706 3601 45 na GCF_000164195.1 PRJNA224116 SAMN00189178 ADTJ00000000.1 na 749549 562 Escherichia coli MS 198-1 strain=MS 198-1 na latest Scaffold Major Full 2010-05-26 ASM16419v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/195/GCF_000164195.1_ASM16419v1/ na na na haploid bacteria 5269973 5236490 50.500000 0 215 564 NCBI RefSeq GCF_000164195.1-RS_2026_06_13 2026-06-13 5316 4979 77 na GCF_000164215.1 PRJNA224116 SAMN00189187 ADTK00000000.1 na 749533 562 Escherichia coli MS 84-1 strain=MS 84-1 na latest Scaffold Major Full 2010-05-26 ASM16421v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/215/GCF_000164215.1_ASM16421v1/ na na na haploid bacteria 5292439 5287926 50.500000 0 182 432 NCBI RefSeq GCF_000164215.1-RS_2026_06_14 2026-06-14 5316 4966 83 na GCF_000164235.1 PRJNA224116 SAMN00189164 ADTL00000000.1 na 749537 562 Escherichia coli MS 115-1 strain=MS 115-1 na latest Scaffold Major Full 2010-05-26 ASM16423v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/235/GCF_000164235.1_ASM16423v1/ na na na haploid bacteria 4822312 4797820 51.000000 0 161 423 NCBI RefSeq GCF_000164235.1-RS_2025_06_13 2025-06-13 4744 4477 73 na GCF_000164255.1 PRJNA224116 SAMN00189174 ADTM00000000.1 na 749545 562 Escherichia coli MS 182-1 strain=MS 182-1 na latest Scaffold Major Full 2010-05-26 ASM16425v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/255/GCF_000164255.1_ASM16425v1/ na na na haploid bacteria 5003342 4982225 50.500000 0 171 456 NCBI RefSeq GCF_000164255.1-RS_2025_06_13 2025-06-13 5015 4675 83 na GCF_000164275.1 PRJNA224116 SAMN00189170 ADTN00000000.1 na 749540 562 Escherichia coli MS 146-1 strain=MS 146-1 na latest Scaffold Major Full 2010-05-26 ASM16427v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/275/GCF_000164275.1_ASM16427v1/ na na na haploid bacteria 4744342 4740105 50.500000 0 135 355 NCBI RefSeq GCF_000164275.1-RS_2025_06_13 2025-06-13 4687 4394 76 na GCF_000164295.1 PRJNA224116 SAMN00189181 ADTO00000000.1 na 749528 562 Escherichia coli MS 45-1 strain=MS 45-1 na latest Scaffold Major Full 2010-05-26 ASM16429v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/295/GCF_000164295.1_ASM16429v1/ na na na haploid bacteria 5017759 4994869 50.500000 0 152 396 NCBI RefSeq GCF_000164295.1-RS_2026_06_14 2026-06-14 4918 4561 71 na GCF_000164315.1 PRJNA224116 SAMN00189184 ADTP00000000.1 na 749531 562 Escherichia coli MS 69-1 strain=MS 69-1 na latest Scaffold Major Full 2010-05-26 ASM16431v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/315/GCF_000164315.1_ASM16431v1/ na na na haploid bacteria 5220755 5207549 50.500000 0 150 425 NCBI RefSeq GCF_000164315.1-RS_2026_06_14 2026-06-14 5145 4858 76 na GCF_000164335.1 PRJNA224116 SAMN00189176 ADTQ00000000.1 na 749547 562 Escherichia coli MS 187-1 strain=MS 187-1 na latest Scaffold Major Full 2010-05-26 ASM16433v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/335/GCF_000164335.1_ASM16433v1/ na na na haploid bacteria 4403159 4384173 51.000000 0 107 310 NCBI RefSeq GCF_000164335.1-RS_2025_06_14 2025-06-14 4278 4024 77 na GCF_000164355.1 PRJNA224116 SAMN00189180 ADTR00000000.1 na 749527 562 Escherichia coli MS 21-1 strain=MS 21-1 na latest Scaffold Major Full 2010-05-26 ASM16435v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/355/GCF_000164355.1_ASM16435v1/ na na na haploid bacteria 5308986 5282923 50.500000 0 206 540 NCBI RefSeq GCF_000164355.1-RS_2026_06_14 2026-06-14 5405 5052 79 na GCF_000164375.1 PRJNA224116 SAMN00189166 ADTS00000000.1 na 749539 562 Escherichia coli MS 117-3 strain=MS 117-3 na latest Scaffold Major Full 2010-05-26 ASM16437v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/375/GCF_000164375.1_ASM16437v1/ na na na haploid bacteria 5035484 5013840 50.500000 0 190 467 NCBI RefSeq GCF_000164375.1-RS_2025_06_14 2025-06-14 5061 4757 80 na GCF_000164395.1 PRJNA224116 SAMN02471114 ADTV00000000.1 na 714995 436 Novacetimonas hansenii ATCC 23769 strain=ATCC 23769 na latest Chromosome Major Full 2010-05-17 ASM16439v1 Penn State University GCA_000164395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/395/GCF_000164395.1_ASM16439v1/ na na na haploid bacteria 3636659 3547102 59.500000 1 1 72 NCBI RefSeq GCF_000164395.1-RS_2025_12_15 2025-12-15 3147 3031 47 20543071 GCF_000164415.1 PRJNA224116 SAMN00189163 ADTW00000000.1 na 749536 562 Escherichia coli MS 110-3 strain=MS 110-3 na latest Scaffold Major Full 2010-05-26 ASM16441v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/415/GCF_000164415.1_ASM16441v1/ na na na haploid bacteria 5071839 5063123 50.500000 0 80 411 NCBI RefSeq GCF_000164415.1-RS_2025_06_14 2025-06-14 5046 4711 77 na GCF_000164435.1 PRJNA224116 SAMN00189171 ADTX00000000.1 na 749541 562 Escherichia coli MS 153-1 strain=MS 153-1 na latest Scaffold Major Full 2010-05-26 ASM16443v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/435/GCF_000164435.1_ASM16443v1/ na na na haploid bacteria 5116862 5087744 50.500000 0 155 507 NCBI RefSeq GCF_000164435.1-RS_2025_06_14 2025-06-14 5104 4711 80 na GCF_000164455.1 PRJNA224116 SAMN00189185 ADTY00000000.1 na 749532 562 Escherichia coli MS 78-1 strain=MS 78-1 na latest Scaffold Major Full 2010-05-26 ASM16445v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/455/GCF_000164455.1_ASM16445v1/ na na na haploid bacteria 4777465 4752681 50.500000 0 127 410 NCBI RefSeq GCF_000164455.1-RS_2025_06_14 2025-06-14 4713 4433 75 na GCF_000164475.1 PRJNA224116 SAMN00189165 ADTZ00000000.1 na 749538 562 Escherichia coli MS 116-1 strain=MS 116-1 na latest Scaffold Major Full 2010-05-26 ASM16447v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/475/GCF_000164475.1_ASM16447v1/ na na na haploid bacteria 4863660 4840256 50.500000 0 141 484 NCBI RefSeq GCF_000164475.1-RS_2025_06_14 2025-06-14 4800 4477 78 na GCF_000164495.1 PRJNA224116 SAMN00189172 ADUA00000000.1 na 749542 562 Escherichia coli MS 16-3 strain=MS 16-3 na latest Scaffold Major Full 2010-05-26 ASM16449v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/495/GCF_000164495.1_ASM16449v1/ na na na haploid bacteria 4982157 4952805 50.500000 0 105 451 NCBI RefSeq GCF_000164495.1-RS_2025_06_14 2025-06-14 4936 4616 68 na GCF_000164515.1 PRJNA224116 SAMN00189173 ADUB00000000.1 na 749544 562 Escherichia coli MS 175-1 strain=MS 175-1 na latest Scaffold Major Full 2010-05-26 ASM16451v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/515/GCF_000164515.1_ASM16451v1/ na na na haploid bacteria 4696414 4673288 50.500000 0 139 413 NCBI RefSeq GCF_000164515.1-RS_2025_06_14 2025-06-14 4582 4279 75 na GCF_000164535.1 PRJNA224116 SAMN00189179 ADUC00000000.1 na 749550 562 Escherichia coli MS 200-1 strain=MS 200-1 na latest Scaffold Major Full 2010-05-26 ASM16453v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/535/GCF_000164535.1_ASM16453v1/ na na na haploid bacteria 5069810 5042708 50.500000 0 153 445 NCBI RefSeq GCF_000164535.1-RS_2025_06_13 2025-06-13 4958 4618 69 na GCF_000164555.1 PRJNA224116 SAMN00189177 ADUD00000000.1 na 749548 562 Escherichia coli MS 196-1 strain=MS 196-1 na latest Scaffold Major Full 2010-05-26 ASM16455v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/555/GCF_000164555.1_ASM16455v1/ na na na haploid bacteria 5253182 5214638 50.500000 0 311 785 NCBI RefSeq GCF_000164555.1-RS_2025_06_13 2025-06-13 5395 4958 84 na GCF_000164575.1 PRJNA224116 SAMN00189175 ADUE00000000.1 na 749546 562 Escherichia coli MS 185-1 strain=MS 185-1 na latest Scaffold Major Full 2010-05-26 ASM16457v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/575/GCF_000164575.1_ASM16457v1/ na na na haploid bacteria 4962359 4939390 50.500000 0 86 378 NCBI RefSeq GCF_000164575.1-RS_2025_06_13 2025-06-13 4853 4534 67 na GCF_000164595.1 PRJNA224116 SAMN00189183 ADUF00000000.1 na 749530 562 Escherichia coli MS 60-1 strain=MS 60-1 na latest Scaffold Major Full 2010-05-26 ASM16459v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/595/GCF_000164595.1_ASM16459v1/ na na na haploid bacteria 5228005 5196275 50.500000 0 136 464 NCBI RefSeq GCF_000164595.1-RS_2025_06_14 2025-06-14 5219 4852 76 na GCF_000164615.1 PRJNA224116 SAMN00189182 ADUG00000000.1 na 749529 562 Escherichia coli MS 57-2 strain=MS 57-2 na latest Scaffold Major Full 2010-05-26 ASM16461v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000164615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/615/GCF_000164615.1_ASM16461v1/ na na na haploid bacteria 4972736 4938310 50.500000 0 67 408 NCBI RefSeq GCF_000164615.1-RS_2025_06_13 2025-06-13 4959 4687 73 na GCF_000164635.1 PRJNA224116 SAMN00001496 ADVL00000000.1 reference genome 525371 204525 Pseudoroseomonas cervicalis ATCC 49957 strain=ATCC 49957 na latest Scaffold Major Full 2010-05-26 ASM16463v1 BCM GCA_000164635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/635/GCF_000164635.1_ASM16463v1/ na assembly from type material na haploid bacteria 5100977 4439462 72.000000 0 498 1015 NCBI RefSeq GCF_000164635.1-RS_2026_03_31 2026-03-31 4669 4476 52 na GCF_000164655.1 PRJNA224116 SAMN00001465 ADVM00000000.1 na 525258 1496 Clostridioides difficile NAP07 strain=NAP07 na latest Scaffold Major Full 2010-05-26 ASM16465v1 BCM GCA_000164655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/655/GCF_000164655.1_ASM16465v1/ na na na haploid bacteria 3905466 3862058 28.500000 0 33 100 NCBI RefSeq GCF_000164655.1-RS_2026_03_04 2026-03-04 3548 3457 40 na GCF_000164675.2 PRJNA224116 SAMN00113608 na reference genome 760570 1318 Streptococcus parasanguinis ATCC 15912 strain=ATCC 15912 na latest Complete Genome Major Full 2011-06-10 ASM16467v2 Baylor College of Medicine GCA_000164675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/675/GCF_000164675.2_ASM16467v2/ na assembly from type material na haploid bacteria 2153652 2153652 41.500000 1 1 1 NCBI RefSeq GCF_000164675.2-RS_2025_12_22 2025-12-22 2050 1936 77 na GCF_000164695.2 PRJNA224116 SAMN00120582 na reference genome 762948 2047 Rothia dentocariosa ATCC 17931 strain=ATCC 17931 na latest Complete Genome Major Full 2010-11-03 ASM16469v2 Baylor College of Medicine GCA_000164695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/695/GCF_000164695.2_ASM16469v2/ na assembly from type material na haploid bacteria 2506025 2506025 53.500000 1 1 1 NCBI RefSeq GCF_000164695.2-RS_2026_03_31 2026-03-31 2163 2088 62 na GCF_000164715.1 PRJNA224116 SAMN00139434 ADVP00000000.1 na 762962 1280 Staphylococcus aureus subsp. aureus ATCC 51811 strain=ATCC 51811 na latest Scaffold Major Full 2010-05-28 ASM16471v1 Baylor College of Medicine GCA_000164715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/715/GCF_000164715.1_ASM16471v1/ na na na haploid bacteria 2778579 2765363 32.500000 0 27 47 NCBI RefSeq GCF_000164715.1-RS_2025_01_09 2025-01-09 2771 2618 65 na GCF_000164865.1 PRJNA224116 SAMN00116754 na reference genome 701347 1334193 [Enterobacter] lignolyticus SCF1 strain=SCF1 na latest Complete Genome Major Full 2010-10-15 ASM16486v1 US DOE Joint Genome Institute GCA_000164865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/865/GCF_000164865.1_ASM16486v1/ na assembly from type material na haploid bacteria 4814049 4814049 57.000000 1 1 1 NCBI RefSeq GCF_000164865.1-RS_2026_03_30 2026-03-30 4571 4417 111 22180812 GCF_000164885.1 PRJNA224116 SAMN02603012 na na 880591 92945 Ketogulonicigenium vulgare Y25 strain=Y25 na latest Complete Genome Major Full 2010-10-15 ASM16488v1 Beijing Institute of Biotechnology GCA_000164885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/885/GCF_000164885.1_ASM16488v1/ na na na haploid bacteria 3288404 3288404 62.000000 3 3 3 NCBI RefSeq GCF_000164885.1-RS_2025_07_24 2025-07-24 3350 3134 79 21037005 GCF_000164905.1 PRJNA224116 SAMN00191234 na reference genome 608538 940 Hydrogenobacter thermophilus TK-6 strain=TK-6 na latest Complete Genome Major Full 2010-10-15 ASM16490v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000164905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/905/GCF_000164905.1_ASM16490v1/ na assembly from type material na haploid bacteria 1742932 1742932 44.000000 1 1 1 NCBI RefSeq GCF_000164905.1-RS_2026_05_05 2026-05-05 1963 1906 49 21677850 GCF_000164925.1 PRJNA224116 SAMN00792434 ADUT00000000.1 na 754093 622 Shigella dysenteriae 1617 strain=1617 na latest Contig Major Full 2010-10-18 ASM16492v1 Institute for Genome Sciences GCA_000164925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/925/GCF_000164925.1_ASM16492v1/ na na na haploid bacteria 4613557 4613557 51.000000 0 67 67 NCBI RefSeq GCF_000164925.1-RS_2025_07_05 2025-07-05 5027 3697 121 na GCF_000164965.1 PRJNA224116 SAMN02603395 na na 883062 1681 Bifidobacterium bifidum S17 strain=S17 na latest Complete Genome Major Full 2010-10-19 ASM16496v1 Institute of Microbiology and Biotechnology, University of Ulm GCA_000164965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/965/GCF_000164965.1_ASM16496v1/ na na na haploid bacteria 2186882 2186882 63.000000 1 1 1 NCBI RefSeq GCF_000164965.1-RS_2026_03_27 2026-03-27 1847 1712 65 21037011 GCF_000164985.3 PRJNA224116 SAMN02603854 na na 886882 1406 Paenibacillus polymyxa SC2 strain=SC2 na latest Complete Genome Minor Full 2015-03-27 ASM16498v2 Shandong Agricultural University GCA_000164985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/164/985/GCF_000164985.3_ASM16498v2/ na na na haploid bacteria 6238510 6238510 44.500000 2 2 2 NCBI RefSeq GCF_000164985.3-RS_2025_02_11 2025-02-11 5855 5565 204 21037012 GCF_000165125.1 PRJNA224116 SAMN02952911 AEIU00000000.1 reference genome 796620 701175 Vibrio caribbeanicus ATCC BAA-2122 strain=ATCC BAA-2122 na latest Contig Major Full 2010-10-20 Vcar_1.0 FDA GCA_000165125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/125/GCF_000165125.1_Vcar_1.0/ na assembly from type material na haploid bacteria 4410536 4410536 41.500000 0 126 126 NCBI RefSeq GCF_000165125.1-RS_2025_08_06 2025-08-06 4036 3906 65 21930677 GCF_000165465.1 PRJNA224116 SAMN00103629 na reference genome 572479 2331 Halanaerobium praevalens DSM 2228 strain=DSM 2228 na latest Complete Genome Major Full 2010-10-21 ASM16546v1 DOE Joint Genome Institute GCA_000165465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/465/GCF_000165465.1_ASM16546v1/ na assembly from type material na haploid bacteria 2309262 2309262 30.500000 1 1 1 NCBI RefSeq GCF_000165465.1-RS_2026_05_01 2026-05-01 2185 2098 71 21886858 GCF_000165485.1 PRJNA224116 SAMN02603592 na na 378806 41 Allostigmatella aurantiaca DW4/3-1 strain=DW4/3-1 na latest Complete Genome Major Full 2010-10-21 ASM16548v1 Max Planck Institute for Terrestrial Microbiology GCA_000165485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/485/GCF_000165485.1_ASM16548v1/ na na na haploid bacteria 10260756 10260756 67.500000 1 1 1 NCBI RefSeq GCF_000165485.1-RS_2025_04_26 2025-04-26 8356 8163 60 21037205 GCF_000165505.1 PRJNA224116 SAMN00116458 na reference genome 572544 167642 Ilyobacter polytropus DSM 2926 strain=DSM 2926 na latest Complete Genome Major Full 2010-10-22 ASM16550v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000165505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/505/GCF_000165505.1_ASM16550v1/ na assembly from type material na haploid bacteria 3132314 3132314 34.500000 3 3 3 NCBI RefSeq GCF_000165505.1-RS_2026_05_01 2026-05-01 3066 2939 108 21304735 GCF_000165525.1 PRJNA224116 SAMN02604259 na na 262728 727 Haemophilus influenzae R2866 strain=R2866 na latest Complete Genome Major Full 2010-10-22 ASM16552v1 University of Washington Genome Center; Seattle Biomedical Research Institute GCA_000165525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/525/GCF_000165525.1_ASM16552v1/ na na na haploid bacteria 1932306 1932306 38.000000 1 1 1 NCBI RefSeq GCF_000165525.1-RS_2026_01_10 2026-01-10 1925 1790 82 na GCF_000165575.1 PRJNA224116 SAMN02604260 na na 262727 727 Haemophilus influenzae R2846 strain=R2846 na latest Complete Genome Major Full 2010-10-25 ASM16557v1 University of Washington; Seattle Biomedical Research Institute GCA_000165575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/575/GCF_000165575.1_ASM16557v1/ na na na haploid bacteria 1819370 1819370 38.000000 1 1 1 NCBI RefSeq GCF_000165575.1-RS_2026_01_10 2026-01-10 1795 1648 80 na GCF_000165595.2 PRJNA224116 SAMN02641500 na na 390236 29518 Borreliella afzelii PKo strain=PKo na latest Chromosome Major Full 2006-07-31 ASM16559v2 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) GCA_000165595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/595/GCF_000165595.2_ASM16559v2/ na na na haploid bacteria 1232503 1232503 27.500000 10 12 12 NCBI RefSeq GCF_000165595.2-RS_2025_08_18 2025-08-18 1223 1131 41 16914037 GCF_000165615.1 PRJNA224116 SAMN02472073 AEJD00000000.1 na 904144 2914925 Gardnerella greenwoodii 101 strain=101 na latest Contig Major Full 2010-10-25 ASM16561v2 Virginia Commonwealth University GCA_000165615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/615/GCF_000165615.1_ASM16561v2/ na na na haploid bacteria 1527495 1527495 43.500000 0 43 43 NCBI RefSeq GCF_000165615.1-RS_2025_07_30 2025-07-30 1249 1162 74 na GCF_000165635.1 PRJNA224116 SAMN02472074 AEJE00000000.1 na 907262 2702 Gardnerella vaginalis 41V strain=41V na latest Contig Major Full 2010-10-25 ASM16563v2 Virginia Commonwealth University GCA_000165635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/635/GCF_000165635.1_ASM16563v2/ na na na haploid bacteria 1659370 1659370 41.500000 0 76 76 NCBI RefSeq GCF_000165635.1-RS_2025_08_18 2025-08-18 1365 1253 51 na GCF_000165675.1 PRJNA224116 SAMN02470184 AEIZ00000000.1 na 907931 1251 Leuconostoc fallax KCTC 3537 strain=KCTC 3537 na latest Contig Major Full 2010-10-26 ASM16567v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000165675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/675/GCF_000165675.1_ASM16567v1/ na assembly from type material na haploid bacteria 1638971 1638971 37.500000 0 30 30 NCBI RefSeq GCF_000165675.1-RS_2025_09_05 2025-09-05 1750 1428 56 21075921 GCF_000165715.2 PRJNA224116 SAMN00103628 na reference genome 756272 119 Rubinisphaera brasiliensis DSM 5305 strain=DSM 5305 na latest Complete Genome Major Full 2011-03-01 ASM16571v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000165715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/715/GCF_000165715.2_ASM16571v3/ na assembly from type material na haploid bacteria 6006602 6006602 56.500000 1 1 1 NCBI RefSeq GCF_000165715.2-RS_2025_11_20 2025-11-20 4709 4627 54 na GCF_000165735.1 PRJNA224116 SAMN00189149 AECS00000000.1 reference genome 706434 187326 Megasphaera micronuciformis F0359 strain=F0359 na latest Scaffold Major Full 2010-11-05 ASM16573v1 Washington University Genome Center GCA_000165735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/735/GCF_000165735.1_ASM16573v1/ na na na haploid bacteria 1765528 1765374 45.500000 0 38 49 NCBI RefSeq GCF_000165735.1-RS_2025_12_02 2025-12-02 1761 1701 55 na GCF_000165775.1 PRJNA224116 SAMN02603348 na na 880633 1587 Lactobacillus helveticus R0052 strain=R0052 na latest Complete Genome Major Full 2012-09-05 ASM16577v3 Institut Rosell Lallemand Inc. GCA_000165775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/775/GCF_000165775.1_ASM16577v3/ na na na haploid bacteria 2129206 2129206 37.000000 1 1 1 NCBI RefSeq GCF_000165775.1-RS_2024_09_03 2024-09-03 2204 1838 76 23105080 GCF_000165795.1 PRJNA224116 SAMN02256532 AEIV00000000.1 reference genome 584708 81412 Aminomonas paucivorans DSM 12260 strain=DSM 12260 na latest Chromosome Major Full 2010-11-01 ASM16579v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000165795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/795/GCF_000165795.1_ASM16579v1/ na assembly from type material na haploid bacteria 2630170 2630070 67.500000 1 1 2 NCBI RefSeq GCF_000165795.1-RS_2025_12_13 2025-12-13 2490 2411 62 21304733 GCF_000165835.1 PRJNA224116 SAMN02603404 na na 762376 85698 Achromobacter xylosoxidans A8 strain=A8 na latest Complete Genome Major Full 2010-10-29 ASM16583v1 Institute of Molecular Genetics, Academy of Sciences of the Czech Republic GCA_000165835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/835/GCF_000165835.1_ASM16583v1/ na na na haploid bacteria 7359146 7359146 66.000000 3 3 3 NCBI RefSeq GCF_000165835.1-RS_2025_02_01 2025-02-01 6870 6770 74 18249097;21097610 GCF_000165905.1 PRJNA224116 SAMN02603510 na na 702459 1681 Bifidobacterium bifidum PRL2010 strain=PRL2010 na latest Complete Genome Major Full 2010-11-02 ASM16590v1 Laboratory of Probiogenomics, Department of genetics, university of Parma, Italy GCA_000165905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/905/GCF_000165905.1_ASM16590v1/ na na na haploid bacteria 2214656 2214656 62.500000 1 1 1 NCBI RefSeq GCF_000165905.1-RS_2026_03_27 2026-03-27 1894 1755 65 20974960 GCF_000165925.1 PRJNA224116 SAMN01816415 na na 720555 1452 Bacillus atrophaeus 1942 strain=1942 na latest Complete Genome Major Full 2010-11-02 ASM16592v1 Transformational Medical Technologies Program GCA_000165925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/165/925/GCF_000165925.1_ASM16592v1/ na na na haploid bacteria 4168266 4168266 43.000000 1 1 1 NCBI RefSeq GCF_000165925.1-RS_2026_03_31 2026-03-31 4258 3985 101 21464989 GCF_000166035.1 PRJNA224116 SAMN00189147 AECU00000000.1 na 748224 853 Faecalibacterium cf. prausnitzii KLE1255 strain=KLE1255 na latest Scaffold Major Full 2010-11-05 ASM16603v1 Washington University Genome Center GCA_000166035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/035/GCF_000166035.1_ASM16603v1/ na na na haploid bacteria 2928734 2926561 56.500000 0 139 249 NCBI RefSeq GCF_000166035.1-RS_2025_06_06 2025-06-06 2991 2851 60 na GCF_000166055.1 PRJNA224116 SAMN00007427 na na 648757 1069 Rhodomicrobium vannielii ATCC 17100 strain=ATCC 17100 na latest Complete Genome Major Full 2010-11-05 ASM16605v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/055/GCF_000166055.1_ASM16605v1/ na na na haploid bacteria 4014469 4014469 62.000000 1 1 1 NCBI RefSeq GCF_000166055.1-RS_2025_04_29 2025-04-29 3730 3602 58 na GCF_000166115.1 PRJNA224116 SAMN00002688 na na 573059 881 Nitratidesulfovibrio vulgaris RCH1 strain=RCH1 na latest Complete Genome Major Full 2010-11-05 ASM16611v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/115/GCF_000166115.1_ASM16611v1/ na na na haploid bacteria 3734357 3734357 63.500000 2 2 2 NCBI RefSeq GCF_000166115.1-RS_2025_12_11 2025-12-11 3287 3185 90 na GCF_000166135.1 PRJNA224116 SAMN02232023 na reference genome 298654 298654 Pseudofrankia inefficax strain=EuI1c na latest Complete Genome Major Full 2010-11-05 ASM16613v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/135/GCF_000166135.1_ASM16613v1/ na assembly from type material na haploid bacteria 8815781 8815781 72.500000 1 1 1 NCBI RefSeq GCF_000166135.1-RS_2025_07_29 2025-07-29 7251 7111 58 na GCF_000166195.2 PRJNA224116 SAMN02256535 AEIH00000000.2 reference genome 714943 423351 Mucilaginibacter paludis DSM 18603 strain=DSM 18603 na latest Chromosome Major Full 2012-01-24 ASM16619v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000166195.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/195/GCF_000166195.2_ASM16619v3/ na assembly from type material na haploid bacteria 8408322 8407722 43.000000 1 1 7 NCBI RefSeq GCF_000166195.2-RS_2025_12_11 2025-12-11 7098 6975 70 na GCF_000166275.1 PRJNA224116 SAMN02436092 AAXU00000000.2 reference genome 388413 388413 Algoriphagus machipongonensis strain=PR1 na latest Chromosome Major Full 2010-11-09 ASM16627v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000166275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/275/GCF_000166275.1_ASM16627v1/ na assembly from type material na haploid bacteria 4787724 4786724 38.500000 1 1 1 NCBI RefSeq GCF_000166275.1-RS_2025_12_11 2025-12-11 4033 3968 51 21183675 GCF_000166295.1 PRJNA224116 SAMN00713638 na na 225937 1033846 Marinobacter adhaerens HP15 strain=HP15 na latest Complete Genome Major Full 2010-11-09 ASM16629v1 Jacobs University gGmbH GCA_000166295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/295/GCF_000166295.1_ASM16629v1/ na assembly from type material na haploid bacteria 4651725 4651725 57.000000 3 3 3 NCBI RefSeq GCF_000166295.1-RS_2025_12_05 2025-12-05 4371 4240 66 21304739 GCF_000166315.1 PRJNA224116 SAMN02603469 na na 890402 216816 Bifidobacterium longum subsp. longum BBMN68 strain=BBMN68 na latest Complete Genome Major Full 2010-11-10 ASM16631v1 Key Lab of Functional Dairy Science of Chinese Ministry of Education, College of Food Science and Nutritional Engineering, China Agricultural University GCA_000166315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/315/GCF_000166315.1_ASM16631v1/ na na na haploid bacteria 2265943 2265943 60.000000 1 1 1 NCBI RefSeq GCF_000166315.1-RS_2026_03_27 2026-03-27 1894 1780 67 21097614 GCF_000166335.1 PRJNA224116 SAMN00713561 na reference genome 632518 55205 Caldicellulosiruptor owensensis OL strain=OL na latest Complete Genome Major Full 2010-11-10 ASM16633v1 US DOE Joint Genome Institute GCA_000166335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/335/GCF_000166335.1_ASM16633v1/ na assembly from type material na haploid bacteria 2428903 2428903 35.500000 1 1 1 NCBI RefSeq GCF_000166335.1-RS_2025_12_13 2025-12-13 2341 2195 60 21216991 GCF_000166355.1 PRJNA224116 SAMN00713562 na reference genome 632292 413888 Caldicellulosiruptor hydrothermalis 108 strain=108 na latest Complete Genome Major Full 2010-11-10 ASM16635v1 US DOE Joint Genome Institute GCA_000166355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/355/GCF_000166355.1_ASM16635v1/ na assembly from type material na haploid bacteria 2770676 2770676 36.000000 1 1 1 NCBI RefSeq GCF_000166355.1-RS_2025_12_13 2025-12-13 2681 2569 61 21216991 GCF_000166395.1 PRJNA224116 SAMN00191237 na reference genome 649349 316068 Leadbetterella byssophila DSM 17132 strain=DSM 17132 na latest Complete Genome Major Full 2010-11-12 ASM16639v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/395/GCF_000166395.1_ASM16639v1/ na assembly from type material na haploid bacteria 4059653 4059653 40.500000 1 1 1 NCBI RefSeq GCF_000166395.1-RS_2025_09_16 2025-09-16 3622 3517 52 21475582 GCF_000166415.1 PRJNA224116 SAMN02232026 na reference genome 656519 656519 Halanaerobium hydrogeniformans strain=sapolanicus na latest Complete Genome Major Full 2010-11-12 ASM16641v1 US DOE Joint Genome Institute GCA_000166415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/415/GCF_000166415.1_ASM16641v1/ na na na haploid bacteria 2613117 2613117 33.000000 1 1 1 NCBI RefSeq GCF_000166415.1-RS_2026_03_27 2026-03-27 2461 2330 74 21602336 GCF_000166455.1 PRJNA224116 SAMN00765529 na na 914149 666 Vibrio cholerae O1 str. 2010EL-1786 strain=2010EL-1786 na latest Complete Genome Major Full 2011-11-10 ASM16645v2 Centers for Disease Control and Prevention GCA_000166455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/455/GCF_000166455.1_ASM16645v2/ na na na haploid bacteria 4077740 4077740 47.500000 2 2 2 NCBI RefSeq GCF_000166455.1-RS_2025_12_19 2025-12-19 3722 3566 105 22099115 GCF_000166475.1 PRJNA224116 SAMN00138732 AELI00000000.1 na 925768 666 Vibrio cholerae O1 str. 2010EL-1798 strain=2010EL-1798 na latest Contig Major Full 2010-11-12 ASM16647v2 Centers for Disease Control and Prevention GCA_000166475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/475/GCF_000166475.1_ASM16647v2/ na na na haploid bacteria 4016678 4016678 47.500000 0 93 93 NCBI RefSeq GCF_000166475.1-RS_2026_05_19 2026-05-19 3659 3548 64 na GCF_000166495.1 PRJNA224116 SAMN00138733 AELJ00000000.1 na 925769 666 Vibrio cholerae O1 str. 2010EL-1792 strain=2010EL-1792 na latest Contig Major Full 2010-11-12 ASM16649v2 Centers for Disease Control and Prevention GCA_000166495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/495/GCF_000166495.1_ASM16649v2/ na na na haploid bacteria 4014995 4014995 47.500000 0 105 105 NCBI RefSeq GCF_000166495.1-RS_2025_12_27 2025-12-27 3661 3550 61 na GCF_000166535.2 PRJNA224116 SAMN02436015 AELA00000000.2 na 913091 562 Escherichia coli TW10598 strain=TW10598 na latest Chromosome Major Full 2017-05-18 ASM16653v3 Institute for Genome Sciences GCA_000166535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/535/GCF_000166535.2_ASM16653v3/ na na na haploid bacteria 5094491 5094491 50.500000 4 37 37 NCBI RefSeq GCF_000166535.2-RS_2025_07_10 2025-07-10 5113 4629 121 21078854 GCF_000166555.1 PRJNA224116 SAMN02435971 AELB00000000.1 na 913090 562 Escherichia coli TW10722 strain=TW10722 na latest Contig Major Full 2010-11-15 ASM16655v2 Institute for Genome Sciences GCA_000166555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/555/GCF_000166555.1_ASM16655v2/ na na na haploid bacteria 5689893 5689893 50.500000 0 405 405 NCBI RefSeq GCF_000166555.1-RS_2025_06_08 2025-06-08 6055 5335 146 21078854 GCF_000166575.1 PRJNA224116 SAMN02435898 AELC00000000.1 na 913089 562 Escherichia coli TW10828 strain=TW10828 na latest Contig Major Full 2010-11-15 ASM16657v2 Institute for Genome Sciences GCA_000166575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/575/GCF_000166575.1_ASM16657v2/ na na na haploid bacteria 5280267 5280267 50.500000 0 227 227 NCBI RefSeq GCF_000166575.1-RS_2026_06_09 2026-06-09 5389 4885 131 21078854 GCF_000166595.1 PRJNA224116 SAMN02436016 AELD00000000.1 na 913088 562 Escherichia coli TW11681 strain=TW11681 na latest Contig Major Full 2010-11-15 ASM16659v2 Institute for Genome Sciences GCA_000166595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/595/GCF_000166595.1_ASM16659v2/ na na na haploid bacteria 5305843 5305843 50.500000 0 153 153 NCBI RefSeq GCF_000166595.1-RS_2025_06_09 2025-06-09 5386 4838 132 21078854 GCF_000166615.1 PRJNA224116 SAMN02435972 AELE00000000.1 na 913087 562 Escherichia coli TW14425 strain=TW14425 na latest Contig Major Full 2010-11-15 ASM16661v2 Institute for Genome Sciences GCA_000166615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/615/GCF_000166615.1_ASM16661v2/ na na na haploid bacteria 5210696 5210696 50.500000 0 155 155 NCBI RefSeq GCF_000166615.1-RS_2025_06_09 2025-06-09 5414 4845 138 21078854 GCF_000166635.1 PRJNA224116 SAMN02604202 na na 521007 139 Borreliella burgdorferi N40 strain=N40 na latest Complete Genome Major Full 2010-11-16 ASM16663v1 University of Maryland School of Medicine - Institute for Genome Sciences GCA_000166635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/635/GCF_000166635.1_ASM16663v1/ na na na haploid bacteria 1339539 1339539 28.500000 17 17 17 NCBI RefSeq GCF_000166635.1-RS_2026_03_27 2026-03-27 1353 1263 40 19505540;20935092 GCF_000166655.1 PRJNA224116 SAMN02604203 na na 521008 139 Borreliella burgdorferi JD1 strain=JD1 na latest Complete Genome Major Full 2010-11-16 ASM16665v1 University of Maryland School of Medicine - Institute for Genome Sciences GCA_000166655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/655/GCF_000166655.1_ASM16665v1/ na na na haploid bacteria 1531091 1531091 28.500000 21 21 21 NCBI RefSeq GCF_000166655.1-RS_2026_03_27 2026-03-27 1587 1486 40 19505540;20935092 GCF_000166695.1 PRJNA224116 SAMN00713564 na reference genome 632335 301953 Caldicellulosiruptor acetigenus I77R1B strain=177R1B na latest Complete Genome Major Full 2010-11-17 ASM16669v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/695/GCF_000166695.1_ASM16669v1/ na assembly from heterotypic synonym type material na haploid bacteria 2802443 2802443 36.000000 2 2 2 NCBI RefSeq GCF_000166695.1-RS_2025_12_13 2025-12-13 2722 2551 61 21216991 GCF_000166715.1 PRJNA224116 SAMN02470198 AEMI00000000.1 na 927691 1244 Leuconostoc gelidum subsp. gelidum KCTC 3527 strain=KCTC 3527 na latest Contig Major Full 2010-11-17 ASM16671v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000166715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/715/GCF_000166715.1_ASM16671v1/ na assembly from type material na haploid bacteria 1957281 1957281 36.500000 0 43 43 NCBI RefSeq GCF_000166715.1-RS_2026_02_12 2026-02-12 1953 1877 52 21131494 GCF_000166775.1 PRJNA224116 SAMN00713565 na reference genome 632348 413889 Caldicellulosiruptor kronotskyensis 2002 strain=2002 na latest Complete Genome Major Full 2010-11-17 ASM16677v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000166775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/775/GCF_000166775.1_ASM16677v1/ na assembly from type material na haploid bacteria 2843785 2843785 35.000000 1 1 1 NCBI RefSeq GCF_000166775.1-RS_2025_12_13 2025-12-13 2643 2494 59 21216991 GCF_000166795.1 PRJNA224116 SAMN02470193 AELK00000000.1 na 913848 1610 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 strain=KCTC 3167 na latest Scaffold Major Full 2010-11-19 ASM16679v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000166795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/795/GCF_000166795.1_ASM16679v1/ na assembly from type material na haploid bacteria 2964752 2744475 43.000000 0 55 268 NCBI RefSeq GCF_000166795.1-RS_2025_09_10 2025-09-10 2772 2634 39 21148735 GCF_000166895.2 PRJNA224116 SAMN02441414 AABM00000000.2 na 205913 216816 Bifidobacterium longum DJO10A strain=DJO10A na latest Scaffold Major Full 2015-06-25 ASM16689v2 DOE Joint Genome Institute GCA_000166895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/895/GCF_000166895.2_ASM16689v2/ na na na haploid bacteria 2375285 2335220 60.000000 0 120 227 NCBI RefSeq GCF_000166895.2-RS_2026_02_15 2026-02-15 2151 1930 69 na GCF_000166935.1 PRJNA224116 SAMN02393728 AABW00000000.1 reference genome 272951 35793 Rickettsia sibirica 246 strain=246 na latest Complete Genome Major Full 2003-02-06 ASM16693v1 Univ. of Maryland GCA_000166935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/166/935/GCF_000166935.1_ASM16693v1/ na assembly from type material na haploid bacteria 1250021 1250021 32.500000 1 1 1 NCBI RefSeq GCF_000166935.1-RS_2026_01_08 2026-01-08 1437 1312 40 na GCF_000167095.1 PRJNA224116 SAMN02471910 AACK00000000.1 na 228399 715 Actinobacillus pleuropneumoniae serovar 1 str. 4074 strain=4074 na latest Scaffold Major Full 2003-04-21 ASM16709v1 Univ. Oklahoma GCA_000167095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/095/GCF_000167095.1_ASM16709v1/ na assembly from type material na haploid bacteria 2292348 2292237 41.500000 0 140 145 NCBI RefSeq GCF_000167095.1-RS_2026_04_21 2026-04-21 2252 2010 65 na GCF_000167135.1 PRJNA224116 SAMN02415268 AADQ00000000.1 na 267409 1639 Listeria monocytogenes serotype 1/2a str. F6854 strain=1/2a F6854 na latest Contig Major Full 2004-05-04 ASM16713v1 TIGR GCA_000167135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/135/GCF_000167135.1_ASM16713v1/ na na na haploid bacteria 2950285 2950285 38.000000 0 133 133 NCBI RefSeq GCF_000167135.1-RS_2025_05_24 2025-05-24 3071 2902 92 15115801 GCF_000167195.1 PRJNA224116 SAMN02441415 AADV00000000.2 na 165597 263511 Crocosphaera watsonii WH 8501 strain=WH 8501 na latest Scaffold Major Full 2005-06-16 ASM16719v1 DOE Joint Genome Institute GCA_000167195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/195/GCF_000167195.1_ASM16719v1/ na assembly from type material na haploid bacteria 6238156 6238113 37.000000 0 323 325 NCBI RefSeq GCF_000167195.1-RS_2026_01_23 2026-01-23 6379 5346 48 na GCF_000167235.1 PRJNA224116 SAMN02435891 AAEN00000000.1 na 280354 1392 Bacillus anthracis str. CNEVA-9066 strain=CNEVA-9066 na latest Scaffold Major Full 2004-06-03 ASM16723v1 J. Craig Venter Institute GCA_000167235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/235/GCF_000167235.1_ASM16723v1/ na na na haploid bacteria 5488676 5488676 35.000000 2 30 30 NCBI RefSeq GCF_000167235.1-RS_2026_04_18 2026-04-18 5777 5249 137 na GCF_000167255.1 PRJNA224116 SAMN02435882 AAEO00000000.1 na 280355 1392 Bacillus anthracis str. A1055 strain=A1055 na latest Scaffold Major Full 2004-06-03 ASM16725v1 J. Craig Venter Institute GCA_000167255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/255/GCF_000167255.1_ASM16725v1/ na na na haploid bacteria 5370618 5370618 35.500000 1 42 42 NCBI RefSeq GCF_000167255.1-RS_2026_04_20 2026-04-20 5671 5258 129 na GCF_000167275.1 PRJNA224116 SAMN02435883 AAEP00000000.1 na 261591 1392 Bacillus anthracis str. Vollum strain=Vollum na latest Scaffold Major Full 2004-06-03 ASM16727v1 J. Craig Venter Institute GCA_000167275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/275/GCF_000167275.1_ASM16727v1/ na assembly from type material na haploid bacteria 5488459 5488459 35.000000 2 52 52 NCBI RefSeq GCF_000167275.1-RS_2026_04_20 2026-04-20 5773 5254 119 na GCF_000167295.1 PRJNA224116 SAMN02435884 AAEQ00000000.1 na 205919 1392 Bacillus anthracis str. Kruger B strain=Kruger B na latest Scaffold Major Full 2004-06-04 ASM16729v1 J. Craig Venter Institute GCA_000167295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/295/GCF_000167295.1_ASM16729v1/ na na na haploid bacteria 5470007 5470007 35.000000 2 64 64 NCBI RefSeq GCF_000167295.1-RS_2026_04_30 2026-04-30 5785 5203 131 na GCF_000167315.1 PRJNA224116 SAMN02435885 AAER00000000.1 na 212045 1392 Bacillus anthracis str. Western North America USA6153 strain=Western North America USA6153 na latest Scaffold Major Full 2004-06-04 ASM16731v1 J. Craig Venter Institute GCA_000167315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/315/GCF_000167315.1_ASM16731v1/ na na na haploid bacteria 5511345 5511345 35.000000 2 44 44 NCBI RefSeq GCF_000167315.1-RS_2026_04_20 2026-04-20 5825 5286 128 na GCF_000167335.1 PRJNA224116 SAMN02435830 AAES00000000.1 na 280477 1392 Bacillus anthracis str. Australia 94 strain=Australia 94 na latest Scaffold Major Full 2004-06-04 ASM16733v1 J. Craig Venter Institute GCA_000167335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/335/GCF_000167335.1_ASM16733v1/ na na na haploid bacteria 5504562 5504562 35.000000 2 49 49 NCBI RefSeq GCF_000167335.1-RS_2026_04_20 2026-04-20 5820 5275 131 na GCF_000167355.1 PRJNA224116 SAMN02441806 AAEW00000000.2 reference genome 281689 891 Desulfuromonas acetoxidans DSM 684 strain=DSM 684 na latest Scaffold Major Full 2006-05-12 ASM16735v1 DOE Joint Genome Institute GCA_000167355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/355/GCF_000167355.1_ASM16735v1/ na assembly from type material na haploid bacteria 3828328 3828312 52.000000 0 51 52 NCBI RefSeq GCF_000167355.1-RS_2026_03_20 2026-03-20 3390 3280 60 na GCF_000167395.1 PRJNA224116 SAMN02435831 AAFJ00000000.1 na 306264 28080 Campylobacter upsaliensis RM3195 strain=RM3195 na latest Scaffold Major Full 2005-01-04 ASM16739v1 TIGR GCA_000167395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/395/GCF_000167395.1_ASM16739v1/ na na na haploid bacteria 1773834 1773834 34.500000 2 20 20 NCBI RefSeq GCF_000167395.1-RS_2026_05_07 2026-05-07 1914 1798 54 15660156 GCF_000167415.1 PRJNA224116 SAMN02435832 AAFL00000000.1 na 306254 195 Campylobacter coli RM2228 strain=RM2228 na latest Scaffold Major Full 2005-01-04 ASM16741v1 TIGR GCA_000167415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/415/GCF_000167415.1_ASM16741v1/ na na na haploid bacteria 1860666 1860666 31.000000 1 38 38 NCBI RefSeq GCF_000167415.1-RS_2025_04_18 2025-04-18 1971 1818 55 15660156 GCF_000167615.1 PRJNA224116 SAMN02363423 AAGY00000000.2 na 170187 1313 Streptococcus pneumoniae TIGR4 strain=TIGR4 na latest Contig Major Full 2006-07-25 ASM16761v1 454 Life Sciences Corporation, USA, Branford GCA_000167615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/615/GCF_000167615.1_ASM16761v1/ na na na haploid bacteria 2016795 2016795 39.500000 0 218 218 NCBI RefSeq GCF_000167615.1-RS_2026_02_01 2026-02-01 2058 1893 38 16056220 GCF_000167635.1 PRJNA224116 SAMN02435863 AAHO00000000.1 na 320390 13373 Burkholderia mallei GB8 horse 4 strain=GB8 horse 4 na latest Contig Major Full 2005-06-09 ASM16763v1 TIGR GCA_000167635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/635/GCF_000167635.1_ASM16763v1/ na na na haploid bacteria 5804858 5804858 68.500000 0 181 181 NCBI RefSeq GCF_000167635.1-RS_2026_02_15 2026-02-15 5366 4979 71 na GCF_000167675.1 PRJNA225530 SAMN02746107 AAIL00000000.2 reference genome 431241 51453 Trichoderma reesei QM6a strain=QM6a na latest Scaffold Major Full 2011-07-18 v2.0 DOE Joint Genome Institute GCA_000167675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/675/GCF_000167675.1_v2.0/ na assembly from type material na haploid fungi 33395713 33348591 53.000000 0 77 128 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-02-05 9116 9109 0 18454138 GCF_000167835.1 PRJNA224116 SAMN02435853 AAJU00000000.2 na 340197 562 Escherichia coli F11 strain=F11 na latest Contig Major Full 2008-06-20 ASM16783v1 TIGR GCA_000167835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/835/GCF_000167835.1_ASM16783v1/ na na na haploid bacteria 5215961 5215961 50.500000 0 119 119 NCBI RefSeq GCF_000167835.1-RS_2025_06_13 2025-06-13 5127 4726 101 na GCF_000167855.1 PRJNA224116 SAMN02435878 AAJV00000000.2 na 340185 562 Escherichia coli E22 strain=E22 na latest Contig Major Full 2008-06-25 ASM16785v1 TIGR GCA_000167855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/855/GCF_000167855.1_ASM16785v1/ na na na haploid bacteria 5528238 5528238 50.500000 0 127 127 NCBI RefSeq GCF_000167855.1-RS_2025_06_13 2025-06-13 5634 5187 106 na GCF_000167875.2 PRJNA224116 SAMN02435896 na na 340186 562 Escherichia coli E110019 strain=E110019 na latest Complete Genome Major Full 2019-07-30 ASM16787v2 TIGR GCA_000167875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/875/GCF_000167875.2_ASM16787v2/ na na na haploid bacteria 5445710 5445710 50.500000 6 6 6 NCBI RefSeq GCF_000167875.2-RS_2025_06_28 2025-06-28 5480 5052 120 na GCF_000167915.2 PRJNA224116 SAMN02435879 AAKB00000000.2 na 344610 562 Escherichia coli 53638 strain=53638 na latest Contig Major Full 2008-05-16 ASM16791v2 TIGR GCA_000167915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/915/GCF_000167915.2_ASM16791v2/ na na na haploid bacteria 5371790 5371790 51.000000 2 4 4 NCBI RefSeq GCF_000167915.2-RS_2025_06_14 2025-06-14 5454 4905 133 na GCF_000167935.2 PRJNA224116 SAMN02435881 AAKJ00000000.3 na 345076 666 Vibrio cholerae V52 strain=V52 na latest Scaffold Major Full 2015-08-05 Vibrio_cholerae_V52_V1 Broad Institute GCA_000167935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/935/GCF_000167935.2_Vibrio_cholerae_V52_V1/ na na na haploid bacteria 4045303 4009047 47.500000 0 59 111 NCBI RefSeq GCF_000167935.2-RS_2026_01_20 2026-01-20 3741 3542 97 na GCF_000167955.1 PRJNA224116 SAMN02471768 AAKL00000000.1 na 342110 305 Ralstonia solanacearum UW551 strain=UW551 na latest Scaffold Major Full 2005-12-19 ASM16795v1 University of Florida GCA_000167955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/955/GCF_000167955.1_ASM16795v1/ na na na haploid bacteria 5895318 5889160 65.000000 0 577 711 NCBI RefSeq GCF_000167955.1-RS_2026_01_27 2026-01-27 5067 4709 53 16404955 GCF_000167975.1 PRJNA224116 SAMN00005351 AALC00000000.2 na 349968 634 Yersinia bercovieri ATCC 43970 strain=ATCC 43970 na latest Contig Major Full 2009-06-01 ASM16797v1 Naval Medical Research Center GCA_000167975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/975/GCF_000167975.1_ASM16797v1/ na assembly from type material na haploid bacteria 4347293 4347293 49.000000 0 229 229 NCBI RefSeq GCF_000167975.1-RS_2026_04_01 2026-04-01 4041 3831 94 na GCF_000167995.1 PRJNA224116 SAMN00005358 AALD00000000.2 na 349967 33060 Yersinia mollaretii ATCC 43969 strain=ATCC 43969 na latest Contig Major Full 2009-06-01 ASM16799v1 Naval Medical Research Center GCA_000167995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/167/995/GCF_000167995.1_ASM16799v1/ na assembly from type material na haploid bacteria 4549461 4549461 49.000000 0 179 179 NCBI RefSeq GCF_000167995.1-RS_2026_04_23 2026-04-23 4109 3921 76 na GCF_000168015.1 PRJNA224116 SAMN00005353 AALE00000000.2 na 349966 29484 Yersinia frederiksenii ATCC 33641 strain=ATCC 33641 na latest Contig Major Full 2009-06-01 ASM16801v1 Naval Medical Research Center GCA_000168015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/015/GCF_000168015.1_ASM16801v1/ na assembly from type material na haploid bacteria 4885341 4885341 47.000000 0 161 161 NCBI RefSeq GCF_000168015.1-RS_2026_04_23 2026-04-23 4497 4281 82 na GCF_000168035.1 PRJNA224116 SAMN00005354 AALF00000000.2 na 349965 631 Yersinia intermedia ATCC 29909 strain=ATCC 29909 na latest Contig Major Full 2009-06-01 ASM16803v1 Naval Medical Research Center GCA_000168035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/035/GCF_000168035.1_ASM16803v1/ na assembly from type material na haploid bacteria 4711317 4711317 47.500000 0 123 123 NCBI RefSeq GCF_000168035.1-RS_2026_04_23 2026-04-23 4264 4050 104 na GCF_000168055.1 PRJNA224116 SAMN02435837 AAMD00000000.1 na 378806 41 Allostigmatella aurantiaca DW4/3-1 strain=DW4/3-1 na latest Contig Major Full 2006-09-28 ASM16805v1 TIGR GCA_000168055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/055/GCF_000168055.1_ASM16805v1/ na na na haploid bacteria 10265408 10265408 67.500000 0 579 579 NCBI RefSeq GCF_000168055.1-RS_2025_03_18 2025-03-18 8857 8394 58 na GCF_000168095.1 PRJNA224116 SAMN02435838 AAMK00000000.2 na 358709 562 Escherichia coli 101-1 strain=101-1 na latest Contig Major Full 2008-07-24 ASM16809v1 TIGR GCA_000168095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/095/GCF_000168095.1_ASM16809v1/ na na na haploid bacteria 4979767 4979767 50.500000 0 91 91 NCBI RefSeq GCF_000168095.1-RS_2025_06_13 2025-06-13 5054 4609 104 na GCF_000168115.1 PRJNA224116 SAMN02435839 AANJ00000000.1 na 360111 197 Campylobacter jejuni subsp. jejuni CF93-6 strain=CF93-6 na latest Contig Major Full 2006-01-27 ASM16811v1 TIGR GCA_000168115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/115/GCF_000168115.1_ASM16811v1/ na na na haploid bacteria 1676304 1676304 30.500000 0 14 14 NCBI RefSeq GCF_000168115.1-RS_2025_07_13 2025-07-13 1756 1629 52 na GCF_000168135.1 PRJNA224116 SAMN02435860 AANK00000000.1 na 360108 197 Campylobacter jejuni subsp. jejuni 260.94 strain=260.94 na latest Contig Major Full 2006-01-27 ASM16813v1 TIGR GCA_000168135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/135/GCF_000168135.1_ASM16813v1/ na na na haploid bacteria 1657846 1657846 30.500000 0 10 10 NCBI RefSeq GCF_000168135.1-RS_2025_07_17 2025-07-17 1731 1610 57 na GCF_000168175.1 PRJNA224116 SAMN02435861 AANQ00000000.1 na 360112 197 Campylobacter jejuni subsp. jejuni HB93-13 strain=HB93-13 na latest Scaffold Major Full 2006-01-27 ASM16817v1 TIGR GCA_000168175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/175/GCF_000168175.1_ASM16817v1/ na na na haploid bacteria 1694788 1694788 30.500000 1 35 35 NCBI RefSeq GCF_000168175.1-RS_2025_07_09 2025-07-09 1786 1633 62 na GCF_000168195.1 PRJNA224116 SAMN02435873 AANT00000000.2 na 360110 197 Campylobacter jejuni subsp. jejuni 84-25 strain=84-25 na latest Contig Major Full 2006-02-17 ASM16819v1 TIGR GCA_000168195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/195/GCF_000168195.1_ASM16819v1/ na na na haploid bacteria 1671624 1671624 30.500000 0 5 5 NCBI RefSeq GCF_000168195.1-RS_2025_06_27 2025-06-27 1749 1640 52 na GCF_000168235.2 PRJNA224116 SAMN02404398 AAOS00000000.2 na 373665 632 Yersinia pestis biovar Orientalis str. IP275 strain=IP275 na latest Contig Major Full 2008-01-17 ASM16823v2 TIGR GCA_000168235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/235/GCF_000168235.2_ASM16823v2/ na na na haploid bacteria 5322065 5322065 48.000000 1 102 102 NCBI RefSeq GCF_000168235.2-RS_2025_07_15 2025-07-15 5059 4651 87 17375195 GCF_000168255.1 PRJNA224116 SAMN00623049 AAPZ00000000.2 na 349123 1598 Limosilactobacillus reuteri subsp. rodentium strain=100-23 na latest Contig Major Full 2008-07-25 ASM16825v1 DOE Joint Genome Institute GCA_000168255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/255/GCF_000168255.1_ASM16825v1/ na assembly from type material na haploid bacteria 2305557 2305557 38.500000 0 2 2 NCBI RefSeq GCF_000168255.1-RS_2026_02_06 2026-02-06 2250 2104 96 na GCF_000168295.1 PRJNA224116 SAMN02435840 AAQJ00000000.2 reference genome 59196 59196 Rickettsiella grylli na na latest Contig Major Full 2007-11-02 ASM16829v1 TIGR GCA_000168295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/295/GCF_000168295.1_ASM16829v1/ na na na haploid bacteria 1581239 1581239 38.000000 0 2 2 NCBI RefSeq GCF_000168295.1-RS_2026_03_30 2026-03-30 1507 1433 53 na GCF_000168315.3 PRJNA224116 SAMN02603060 na na 383407 347 Xanthomonas oryzae pv. oryzicola BLS256 strain=BLS256 na latest Complete Genome Major Full 2015-06-29 ASM16831v3 TIGR GCA_000168315.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/315/GCF_000168315.3_ASM16831v3/ na na na haploid bacteria 4831746 4831746 64.000000 1 1 1 NCBI RefSeq GCF_000168315.3-RS_2026_05_05 2026-05-05 4357 3600 225 21784931;27148456 GCF_000168335.1 PRJNA224116 SAMN02471994 AAQW00000000.1 na 388272 287 Pseudomonas aeruginosa PACS2 strain=PACS2 na latest Complete Genome Major Full 2006-06-05 ASM16833v1 University of Washington GCA_000168335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/335/GCF_000168335.1_ASM16833v1/ na na na haploid bacteria 6492423 6492423 66.500000 1 1 1 NCBI RefSeq GCF_000168335.1-RS_2025_03_18 2025-03-18 6043 5936 79 na GCF_000168355.3 PRJNA224116 SAMN02469350 na na 672190 1307 Streptococcus suis 05HAS68 strain=05HAS68 na latest Complete Genome Major Full 2015-05-14 ASM16835v3 Beijing Institute of Genomics, Chinese Academy of Sciences, GCA_000168355.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/355/GCF_000168355.3_ASM16835v3/ na na na haploid bacteria 2176073 2176073 41.000000 1 1 1 NCBI RefSeq GCF_000168355.3-RS_2025_04_20 2025-04-20 2172 2021 72 17375201;25891917 GCF_000168395.1 PRJNA224116 SAMN02415199 AARJ00000000.2 na 393117 1639 Listeria monocytogenes FSL J1-194 strain=FSL J1-194 na latest Contig Major Full 2008-08-28 ASM16839v1 Broad Institute GCA_000168395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/395/GCF_000168395.1_ASM16839v1/ na na na haploid bacteria 2989818 2989818 38.000000 0 30 30 NCBI RefSeq GCF_000168395.1-RS_2025_08_25 2025-08-25 3017 2921 50 na GCF_000168515.1 PRJNA224116 SAMN02415204 AARP00000000.4 na 393123 1639 Listeria monocytogenes FSL N1-017 strain=FSL N1-017 na latest Contig Major Full 2010-07-14 ASM16851v1 Broad Institute GCA_000168515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/515/GCF_000168515.1_ASM16851v1/ na na na haploid bacteria 3142060 3142060 38.000000 0 79 79 NCBI RefSeq GCF_000168515.1-RS_2025_08_25 2025-08-25 3233 3133 44 na GCF_000168535.1 PRJNA224116 SAMN02415205 AARQ00000000.2 na 393124 1639 Listeria monocytogenes FSL N3-165 strain=FSL N3-165 na latest Contig Major Full 2008-09-03 ASM16853v1 Broad Institute GCA_000168535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/535/GCF_000168535.1_ASM16853v1/ na na na haploid bacteria 2884080 2884080 38.000000 0 39 39 NCBI RefSeq GCF_000168535.1-RS_2025_08_25 2025-08-25 2875 2797 37 na GCF_000168575.2 PRJNA224116 SAMN00013319 na na 393126 1639 Listeria monocytogenes FSL R2-561 strain=FSLR2-561 na latest Complete Genome Major Full 2011-09-13 ASM16857v2 Broad Institute GCA_000168575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/575/GCF_000168575.2_ASM16857v2/ na na na haploid bacteria 2973801 2973801 38.000000 1 1 1 NCBI RefSeq GCF_000168575.2-RS_2025_05_23 2025-05-23 3008 2862 89 na GCF_000168595.2 PRJNA224116 SAMN00012880 na na 393127 1639 Listeria monocytogenes Finland 1998 strain=Finland 1998 (IH 42573) na latest Complete Genome Major Full 2011-09-14 ASM16859v2 Broad Institute GCA_000168595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/595/GCF_000168595.2_ASM16859v2/ na na na haploid bacteria 2874431 2874431 38.000000 1 1 1 NCBI RefSeq GCF_000168595.2-RS_2025_06_12 2025-06-12 2858 2717 89 na GCF_000168615.1 PRJNA224116 SAMN00771317 AARU00000000.2 na 393128 1639 Listeria monocytogenes F6900 strain=F6900 na latest Contig Major Full 2008-09-03 ASM16861v1 Broad Institute GCA_000168615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/615/GCF_000168615.1_ASM16861v1/ na na na haploid bacteria 2968620 2968620 38.000000 0 23 23 NCBI RefSeq GCF_000168615.1-RS_2025_08_25 2025-08-25 2997 2918 45 na GCF_000168635.2 PRJNA224116 SAMN00769971 na na 393130 1639 Listeria monocytogenes J0161 strain=J0161 na latest Complete Genome Major Full 2011-09-07 ASM16863v2 Broad Institute GCA_000168635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/635/GCF_000168635.2_ASM16863v2/ na na na haploid bacteria 3000464 3000464 38.000000 1 1 1 NCBI RefSeq GCF_000168635.2-RS_2025_01_06 2025-01-06 3032 2937 77 na GCF_000168655.1 PRJNA224116 SAMN00769972 AARX00000000.2 na 393131 1639 Listeria monocytogenes J2818 strain=J2818 na latest Contig Major Full 2008-09-03 ASM16865v1 Broad Institute GCA_000168655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/655/GCF_000168655.1_ASM16865v1/ na na na haploid bacteria 2973040 2973040 38.000000 0 24 24 NCBI RefSeq GCF_000168655.1-RS_2025_08_25 2025-08-25 3011 2927 47 na GCF_000168695.2 PRJNA224116 SAMN02641382 na na 393133 1639 Listeria monocytogenes 10403S strain=10403S na latest Complete Genome Major Full 2011-09-07 ASM16869v2 Broad Institute GCA_000168695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/695/GCF_000168695.2_ASM16869v2/ na na na haploid bacteria 2903106 2903106 38.000000 1 1 1 NCBI RefSeq GCF_000168695.2-RS_2026_03_09 2026-03-09 2912 2800 89 na GCF_000168715.1 PRJNA224116 SAMN02441792 AASE00000000.1 reference genome 377431 84205 Chlorobium ferrooxidans DSM 13031 strain=DSM 13031 na latest Contig Major Full 2006-07-13 ASM16871v1 DOE Joint Genome Institute GCA_000168715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/715/GCF_000168715.1_ASM16871v1/ na assembly from type material na haploid bacteria 2538957 2538957 50.000000 0 47 47 NCBI RefSeq GCF_000168715.1-RS_2025_12_13 2025-12-13 2325 2228 54 na GCF_000168775.2 PRJNA224116 SAMN01085703 na na 351581 263 Francisella tularensis subsp. holarctica FSC200 strain=FSC200 na latest Complete Genome Major Full 2012-09-28 ASM16877v2 University of Washington GCA_000168775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/775/GCF_000168775.2_ASM16877v2/ na na na haploid bacteria 1894157 1894157 32.000000 1 1 1 NCBI RefSeq GCF_000168775.2-RS_2026_06_12 2026-06-12 1975 1637 52 17000723;23209222 GCF_000168815.1 PRJNA224116 SAMN02415241 AATL00000000.2 na 401650 1639 Listeria monocytogenes HPB2262 strain=HPB2262 na latest Contig Major Full 2008-09-03 ASM16881v1 Broad Institute GCA_000168815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/815/GCF_000168815.1_ASM16881v1/ na na na haploid bacteria 2991120 2991120 38.000000 0 79 79 NCBI RefSeq GCF_000168815.1-RS_2025_08_25 2025-08-25 3044 2955 35 na GCF_000168855.1 PRJNA224116 SAMN02441780 AAUJ00000000.2 na 399795 285 Comamonas testosteroni KF-1 strain=KF-1 na latest Contig Major Full 2009-01-14 ASM16885v1 DOE Joint Genome Institute GCA_000168855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/855/GCF_000168855.1_ASM16885v1/ na na na haploid bacteria 6026527 6026527 62.000000 0 1 1 NCBI RefSeq GCF_000168855.1-RS_2025_06_01 2025-06-01 5598 5391 119 15240283 GCF_000168875.3 PRJNA224116 SAMN02435866 na na 360116 777 Coxiella burnetii 'MSU Goat Q177' strain=MSU Goat Q177 na latest Complete Genome Major Full 2016-12-27 ASM16887v3 TIGR GCA_000168875.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/875/GCF_000168875.3_ASM16887v3/ na na na haploid bacteria 2102302 2102302 42.500000 2 2 2 NCBI RefSeq GCF_000168875.3-RS_2025_07_01 2025-07-01 2222 1944 51 na GCF_000168895.2 PRJNA224116 SAMN02435867 AAUR00000000.2 na 412966 666 Vibrio cholerae 1587 strain=1587 na latest Scaffold Major Full 2015-08-05 Vibrio_cholerae_1587 Broad Institute GCA_000168895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/895/GCF_000168895.2_Vibrio_cholerae_1587/ na na na haploid bacteria 4216194 4195855 47.500000 0 73 114 NCBI RefSeq GCF_000168895.2-RS_2026_01_20 2026-01-20 3983 3771 122 na GCF_000168915.2 PRJNA224116 SAMN02435841 AAUT00000000.2 na 412614 666 Vibrio cholerae 2740-80 strain=2740-80 na latest Scaffold Major Full 2015-07-23 ASM16891v3 Broad Institute GCA_000168915.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/915/GCF_000168915.2_ASM16891v3/ na na na haploid bacteria 4068340 4025574 47.500000 0 41 70 NCBI RefSeq GCF_000168915.2-RS_2026_01_21 2026-01-21 3754 3585 94 na GCF_000168935.2 PRJNA224116 SAMN02435869 AAUU00000000.2 na 412883 666 Vibrio cholerae MZO-3 strain=MZO-3 na latest Scaffold Major Full 2015-07-23 ASM16893v3 Broad Institute GCA_000168935.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/935/GCF_000168935.2_ASM16893v3/ na na na haploid bacteria 4137330 4119643 47.500000 0 45 77 NCBI RefSeq GCF_000168935.2-RS_2026_01_21 2026-01-21 3864 3571 100 na GCF_000168975.1 PRJNA224116 SAMN02436089 AAUW00000000.1 reference genome 384765 187304 Roseibium aggregatum IAM 12614 strain=IAM 12614 na latest Contig Major Full 2006-11-28 ASM16897v1 J. Craig Venter Institute GCA_000168975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/168/975/GCF_000168975.1_ASM16897v1/ na assembly from type material na haploid bacteria 6561391 6561391 59.500000 0 48 48 NCBI RefSeq GCF_000168975.1-RS_2025_12_10 2025-12-10 6139 5903 77 na GCF_000169015.1 PRJNA224116 SAMN00627055 AAVM00000000.2 na 411901 47678 Bacteroides caccae ATCC 43185 strain=ATCC 43185 na latest Contig Major Full 2007-03-29 ASM16901v1 Washington University Genome Sequencing Center GCA_000169015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/015/GCF_000169015.1_ASM16901v1/ na assembly from type material na haploid bacteria 4564814 4564814 42.000000 0 21 21 NCBI RefSeq GCF_000169015.1-RS_2025_12_10 2025-12-10 3712 3526 89 na GCF_000169095.1 PRJNA224116 SAMN02436090 AAVU00000000.1 na 313612 313612 Lyngbya sp. PCC 8106 strain=PCC 8106 na latest Contig Major Full 2006-12-15 ASM16909v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000169095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/095/GCF_000169095.1_ASM16909v1/ na na na haploid bacteria 7037511 7037511 41.000000 0 110 110 NCBI RefSeq GCF_000169095.1-RS_2024_09_22 2024-09-22 5981 5821 57 na GCF_000169135.1 PRJNA224116 SAMN02436091 AAVW00000000.1 na 313624 70799 Nodularia spumigena CCY9414 strain=CCY9414 na latest Contig Major Full 2006-12-15 ASM16913v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000169135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/135/GCF_000169135.1_ASM16913v1/ na na na haploid bacteria 5316258 5316258 41.500000 0 204 204 NCBI RefSeq GCF_000169135.1-RS_2026_02_15 2026-02-15 4769 4511 52 na GCF_000169155.1 PRJNA224116 SAMN00623067 AAWL00000000.1 reference genome 401526 261685 Thermosinus carboxydivorans Nor1 strain=Nor1 na latest Contig Major Full 2007-01-05 ASM16915v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000169155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/155/GCF_000169155.1_ASM16915v1/ na assembly from type material na haploid bacteria 2889774 2889774 51.500000 0 49 49 NCBI RefSeq GCF_000169155.1-RS_2025_12_13 2025-12-13 2967 2787 116 na GCF_000169175.1 PRJNA224116 SAMN02436130 AAWS00000000.1 reference genome 313606 1027 Microscilla marina ATCC 23134 strain=ATCC 23134 na latest Contig Major Full 2007-01-22 ASM16917v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000169175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/175/GCF_000169175.1_ASM16917v1/ na assembly from type material na haploid bacteria 9771226 9771226 40.500000 0 135 135 NCBI RefSeq GCF_000169175.1-RS_2025_11_21 2025-11-21 7468 7276 137 na GCF_000169195.2 PRJNA224116 SAMN00623030 na na 345219 1398 Heyndrickxia coagulans 36D1 strain=36D1 na latest Complete Genome Major Full 2011-09-23 ASM16919v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000169195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/195/GCF_000169195.2_ASM16919v2/ na na na haploid bacteria 3552226 3552226 46.500000 1 1 1 NCBI RefSeq GCF_000169195.2-RS_2025_09_11 2025-09-11 3357 3174 119 22675583 GCF_000169235.1 PRJNA224116 SAMN00000008 AAXA00000000.2 na 411461 39486 Dorea formicigenerans ATCC 27755 strain=ATCC 27755 na latest Contig Major Full 2007-10-10 ASM16923v1 Washington University Genome Sequencing Center GCA_000169235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/235/GCF_000169235.1_ASM16923v1/ na assembly from type material na haploid bacteria 3186031 3186031 41.000000 0 16 16 NCBI RefSeq GCF_000169235.1-RS_2026_04_07 2026-04-07 3122 2979 79 na GCF_000169255.2 PRJNA224116 SAMN00627059 AAXG00000000.2 reference genome 411467 106588 Pseudoflavonifractor capillosus ATCC 29799 strain=ATCC 29799 na latest Contig Major Full 2009-02-09 ASM16925v2 Washington University Genome Sequencing Center GCA_000169255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/255/GCF_000169255.2_ASM16925v2/ na assembly from type material na haploid bacteria 4241076 4241076 59.000000 0 65 65 NCBI RefSeq GCF_000169255.2-RS_2026_04_14 2026-04-14 4074 3920 68 na GCF_000169335.1 PRJNA224116 SAMN02436157 AAXW00000000.1 reference genome 391612 2546361 Crocosphaera chwakensis CCY0110 strain=CCY0110 na latest Contig Major Full 2007-03-06 ASM16933v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000169335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/335/GCF_000169335.1_ASM16933v1/ na assembly from type material na haploid bacteria 5880532 5880532 36.500000 0 163 163 NCBI RefSeq GCF_000169335.1-RS_2025_12_13 2025-12-13 5698 5479 55 na GCF_000169375.1 PRJNA224116 SAMN02436124 AAXY00000000.1 na 270374 270374 Marinobacter sp. ELB17 strain=ELB17 na latest Contig Major Full 2007-03-06 ASM16937v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000169375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/375/GCF_000169375.1_ASM16937v1/ na na na haploid bacteria 4894744 4894744 54.500000 0 75 75 NCBI RefSeq GCF_000169375.1-RS_2025_01_31 2025-01-31 4748 4495 61 na GCF_000169415.1 PRJNA224116 SAMN02436093 AAYA00000000.1 na 388399 52603 Sagittula stellata E-37 strain=E-37 na latest Contig Major Full 2007-03-07 ASM16941v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000169415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/415/GCF_000169415.1_ASM16941v1/ na assembly from type material na haploid bacteria 5262893 5262893 65.000000 0 39 39 NCBI RefSeq GCF_000169415.1-RS_2026_02_15 2026-02-15 5035 4894 56 na GCF_000169435.1 PRJNA224116 SAMN02436102 AAYB00000000.1 na 391593 391593 Roseobacter sp. CCS2 strain=CCS2 na latest Contig Major Full 2007-03-07 ASM16943v1 Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000169435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/435/GCF_000169435.1_ASM16943v1/ na na na haploid bacteria 3497325 3497325 55.500000 0 11 11 NCBI RefSeq GCF_000169435.1-RS_2025_08_25 2025-08-25 3577 3507 45 na GCF_000169455.1 PRJNA224116 SAMN02436125 AAYC00000000.1 na 388739 388739 Roseobacter sp. SK209-2-6 strain=SK209-2-6 na latest Contig Major Full 2007-03-07 ASM16945v1 J. Craig Venter Institute GCA_000169455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/455/GCF_000169455.1_ASM16945v1/ na na na haploid bacteria 4555826 4555826 57.000000 0 29 29 NCBI RefSeq GCF_000169455.1-RS_2025_08_25 2025-08-25 4373 4231 78 na GCF_000169475.1 PRJNA224116 SAMN00627102 AAYG00000000.2 na 411470 33038 Mediterraneibacter gnavus ATCC 29149 strain=ATCC 29149 na latest Contig Major Full 2007-05-09 ASM16947v1 Washington University Genome Sequencing Center GCA_000169475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/475/GCF_000169475.1_ASM16947v1/ na assembly from type material na haploid bacteria 3501911 3501911 43.000000 0 43 43 NCBI RefSeq GCF_000169475.1-RS_2026_02_27 2026-02-27 3538 3390 69 na GCF_000169495.2 PRJNA224116 SAMN02435843 AAYJ00000000.1 na 360117 777 Coxiella burnetii Q321 strain=Q321 na latest Contig Major Full 2012-07-27 ASM16949v2 TIGR GCA_000169495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/495/GCF_000169495.2_ASM16949v2/ na na na haploid bacteria 2004584 2004584 42.500000 0 98 98 NCBI RefSeq GCF_000169495.2-RS_2025_03_12 2025-03-12 2129 1866 49 na GCF_000169535.1 PRJNA224116 SAMN02435844 AAYN00000000.2 reference genome 626095 2130 Ureaplasma urealyticum serovar 8 str. ATCC 27618 strain=ATCC 27618 na latest Contig Major Full 2009-03-19 ASM16953v1 TIGR GCA_000169535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/535/GCF_000169535.1_ASM16953v1/ na assembly from type material na haploid bacteria 881828 881828 26.000000 0 2 2 NCBI RefSeq GCF_000169535.1-RS_2025_12_13 2025-12-13 706 658 39 na GCF_000169555.1 PRJNA224116 SAMN02435864 AAYO00000000.2 na 550748 2130 Ureaplasma urealyticum serovar 4 str. ATCC 27816 strain=ATCC 27816 na latest Contig Major Full 2008-09-05 ASM16955v1 TIGR GCA_000169555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/555/GCF_000169555.1_ASM16955v1/ na na na haploid bacteria 835413 835413 26.000000 0 4 4 NCBI RefSeq GCF_000169555.1-RS_2026_02_27 2026-02-27 688 636 39 na GCF_000169575.2 PRJNA224116 SAMN02435845 AAYP00000000.1 na 519849 2130 Ureaplasma urealyticum serovar 7 str. ATCC 27819 strain=ATCC 27819 na latest Contig Major Full 2007-03-21 ASM16957v2 TIGR GCA_000169575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/575/GCF_000169575.2_ASM16957v2/ na na na haploid bacteria 894015 894015 26.000000 0 12 12 NCBI RefSeq GCF_000169575.2-RS_2026_02_26 2026-02-26 715 649 44 na GCF_000169615.1 PRJNA224116 SAMN02404404 AAYR00000000.1 na 404218 632 Yersinia pestis biovar Antiqua str. UG05-0454 strain=UG05-0454 na latest Contig Major Full 2007-03-26 ASM16961v1 TIGR GCA_000169615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/615/GCF_000169615.1_ASM16961v1/ na na na haploid bacteria 4838246 4838246 47.500000 0 98 98 NCBI RefSeq GCF_000169615.1-RS_2026_03_20 2026-03-20 4543 4083 110 na GCF_000169635.1 PRJNA224116 SAMN02404403 AAYS00000000.1 na 404217 632 Yersinia pestis biovar Orientalis str. MG05-1020 strain=MG05-1020 na latest Contig Major Full 2007-03-26 ASM16963v1 TIGR GCA_000169635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/635/GCF_000169635.1_ASM16963v1/ na na na haploid bacteria 4977609 4977609 47.500000 0 80 80 NCBI RefSeq GCF_000169635.1-RS_2026_03_20 2026-03-20 4639 4209 106 na GCF_000169655.1 PRJNA224116 SAMN02404402 AAYT00000000.1 na 404216 632 Yersinia pestis biovar Mediaevalis str. K1973002 strain=K1973002 na latest Contig Major Full 2007-03-26 ASM16965v1 TIGR GCA_000169655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/655/GCF_000169655.1_ASM16965v1/ na na na haploid bacteria 4720694 4720694 47.500000 0 73 73 NCBI RefSeq GCF_000169655.1-RS_2026_03_27 2026-03-27 4358 3979 110 19820101 GCF_000169675.1 PRJNA224116 SAMN02404401 AAYU00000000.1 na 404215 632 Yersinia pestis biovar Antiqua str. B42003004 strain=B42003004 na latest Contig Major Full 2007-03-26 ASM16967v1 TIGR GCA_000169675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/675/GCF_000169675.1_ASM16967v1/ na na na haploid bacteria 4841690 4841690 47.500000 0 69 69 NCBI RefSeq GCF_000169675.1-RS_2026_03_20 2026-03-20 4430 4091 103 19820101 GCF_000169695.1 PRJNA224116 SAMN02404400 AAYV00000000.1 na 360099 632 Yersinia pestis biovar Antiqua str. E1979001 strain=E1979001 na latest Contig Major Full 2007-03-26 ASM16969v1 TIGR GCA_000169695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/695/GCF_000169695.1_ASM16969v1/ na na na haploid bacteria 4847813 4847813 47.500000 0 75 75 NCBI RefSeq GCF_000169695.1-RS_2025_12_28 2025-12-28 4449 4099 98 19820101 GCF_000169715.1 PRJNA224116 SAMN02441778 AAYX00000000.1 na 425067 28450 Burkholderia pseudomallei 305 strain=305 na latest Contig Major Full 2007-03-28 ASM16971v1 TIGR GCA_000169715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/715/GCF_000169715.1_ASM16971v1/ na na na haploid bacteria 7453649 7453649 68.000000 0 36 36 NCBI RefSeq GCF_000169715.1-RS_2026_02_15 2026-02-15 6693 6425 73 na GCF_000169795.1 PRJNA224116 SAMN02393739 AAZG00000000.1 na 374928 727 Haemophilus influenzae PittAA strain=PittAA na latest Contig Major Full 2007-04-13 ASM16979v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000169795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/795/GCF_000169795.1_ASM16979v1/ na na na haploid bacteria 1876892 1876892 38.000000 0 40 40 NCBI RefSeq GCF_000169795.1-RS_2025_12_31 2025-12-31 1949 1772 63 17550610 GCF_000169875.1 PRJNA224116 SAMN02435865 AAZP00000000.1 na 436115 13373 Burkholderia mallei PRL-20 strain=PRL-20 na latest Contig Major Full 2007-08-15 ASM16987v1 TIGR GCA_000169875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/875/GCF_000169875.1_ASM16987v1/ na na na haploid bacteria 5669751 5669751 68.500000 0 274 274 NCBI RefSeq GCF_000169875.1-RS_2025_08_05 2025-08-05 5309 4891 63 na GCF_000169895.1 PRJNA224116 SAMN02435847 AAZQ00000000.1 na 519851 134821 Ureaplasma parvum serovar 6 str. ATCC 27818 strain=ATCC 27818 na latest Contig Major Full 2007-04-24 ASM16989v1 TIGR GCA_000169895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/895/GCF_000169895.1_ASM16989v1/ na na na haploid bacteria 772971 772971 26.000000 0 5 5 NCBI RefSeq GCF_000169895.1-RS_2026_02_27 2026-02-27 658 603 48 na GCF_000169915.1 PRJNA224116 SAMN02435856 AAZR00000000.1 na 518603 2130 Ureaplasma urealyticum serovar 5 str. ATCC 27817 strain=ATCC 27817 na latest Contig Major Full 2007-04-24 ASM16991v1 TIGR GCA_000169915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/915/GCF_000169915.1_ASM16991v1/ na na na haploid bacteria 884046 884046 26.000000 0 18 18 NCBI RefSeq GCF_000169915.1-RS_2026_02_26 2026-02-26 716 641 45 na GCF_000169935.1 PRJNA224116 SAMN02435857 AAZS00000000.1 na 526347 2130 Ureaplasma urealyticum serovar 11 str. ATCC 33695 strain=ATCC 33695 na latest Contig Major Full 2007-04-24 ASM16993v1 TIGR GCA_000169935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/935/GCF_000169935.1_ASM16993v1/ na na na haploid bacteria 886725 886725 26.000000 0 9 9 NCBI RefSeq GCF_000169935.1-RS_2026_02_27 2026-02-27 706 642 48 na GCF_000169955.1 PRJNA224116 SAMN02435858 AAZT00000000.1 na 550747 2130 Ureaplasma urealyticum serovar 12 str. ATCC 33696 strain=ATCC 33696 na latest Contig Major Full 2007-04-24 ASM16995v1 TIGR GCA_000169955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/169/955/GCF_000169955.1_ASM16995v1/ na na na haploid bacteria 844514 844514 26.000000 0 5 5 NCBI RefSeq GCF_000169955.1-RS_2026_02_27 2026-02-27 695 645 42 na GCF_000170195.2 PRJNA224116 SAMN02415270 ABAK00000000.2 na 439842 28901 Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 strain=CVM29188 na latest Contig Major Full 2008-07-25 ASM17019v2 TIGR GCA_000170195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/195/GCF_000170195.2_ASM17019v2/ na na na haploid bacteria 5089336 5089336 52.000000 3 4 4 NCBI RefSeq GCF_000170195.2-RS_2025_04_26 2025-04-26 4949 4639 121 19648374;21602358 GCF_000170215.1 PRJNA224116 SAMN02415271 ABAM00000000.2 na 439846 28901 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23 strain=SARA23 na latest Contig Major Full 2008-08-22 ASM17021v1 TIGR GCA_000170215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/215/GCF_000170215.1_ASM17021v1/ na na na haploid bacteria 4726474 4726474 52.500000 0 2 2 NCBI RefSeq GCF_000170215.1-RS_2025_04_26 2025-04-26 4561 4341 116 21602358 GCF_000170235.1 PRJNA224116 SAMN02415272 ABAN00000000.1 na 439847 28901 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 strain=SARA29 na latest Contig Major Full 2007-05-10 ASM17023v1 TIGR GCA_000170235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/235/GCF_000170235.1_ASM17023v1/ na na na haploid bacteria 4928961 4928961 52.000000 0 182 182 NCBI RefSeq GCF_000170235.1-RS_2025_04_15 2025-04-15 4895 4545 49 21602358 GCF_000170255.1 PRJNA224116 SAMN02415273 ABAO00000000.1 na 440534 28901 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701 strain=CVM23701 na latest Contig Major Full 2007-05-10 ASM17025v1 TIGR GCA_000170255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/255/GCF_000170255.1_ASM17025v1/ na na na haploid bacteria 4895918 4895918 52.500000 0 113 113 NCBI RefSeq GCF_000170255.1-RS_2025_04_15 2025-04-15 4847 4599 53 21602358 GCF_000170275.1 PRJNA224116 SAMN02404399 ABAT00000000.1 na 404214 632 Yersinia pestis biovar Orientalis str. F1991016 strain=F1991016 na latest Contig Major Full 2007-05-16 ASM17027v1 TIGR GCA_000170275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/275/GCF_000170275.1_ASM17027v1/ na na na haploid bacteria 4892085 4892085 47.500000 0 107 107 NCBI RefSeq GCF_000170275.1-RS_2026_03_27 2026-03-27 4561 4152 94 19820101 GCF_000170315.1 PRJNA224116 SAMN02470666 ABBD00000000.1 na 441165 57975 Burkholderia thailandensis TXDOH strain=TXDOH na latest Contig Major Full 2007-06-06 ASM17031v1 NMRC GCA_000170315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/315/GCF_000170315.1_ASM17031v1/ na na na haploid bacteria 6515911 6515911 67.500000 0 810 810 NCBI RefSeq GCF_000170315.1-RS_2026_02_16 2026-02-16 6266 5818 59 na GCF_000170335.1 PRJNA224116 SAMN02470672 ABBE00000000.1 na 441166 101571 Burkholderia ubonensis Bu strain=Bu na latest Contig Major Full 2007-06-06 ASM17033v1 NMRC GCA_000170335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/335/GCF_000170335.1_ASM17033v1/ na na na haploid bacteria 6932532 6932532 67.500000 0 1143 1143 NCBI RefSeq GCF_000170335.1-RS_2026_02_15 2026-02-15 7082 6522 62 na GCF_000170355.1 PRJNA224116 SAMN02470667 ABBF00000000.1 na 441163 342113 Burkholderia oklahomensis EO147 strain=EO147 na latest Contig Major Full 2007-06-06 ASM17035v1 NMRC GCA_000170355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/355/GCF_000170355.1_ASM17035v1/ na na na haploid bacteria 7047157 7047157 67.000000 0 886 886 NCBI RefSeq GCF_000170355.1-RS_2026_02_16 2026-02-16 6921 6385 59 na GCF_000170375.1 PRJNA224116 SAMN02470663 ABBG00000000.1 na 441162 342113 Burkholderia oklahomensis C6786 strain=C6786 na latest Contig Major Full 2007-06-06 ASM17037v1 NMRC GCA_000170375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/375/GCF_000170375.1_ASM17037v1/ na assembly from type material na haploid bacteria 6987607 6987607 67.000000 0 633 633 NCBI RefSeq GCF_000170375.1-RS_2026_02_15 2026-02-15 6685 6239 59 na GCF_000170395.1 PRJNA224116 SAMN02470658 ABBH00000000.1 na 441164 57975 Burkholderia thailandensis Bt4 strain=Bt4 na latest Contig Major Full 2007-06-06 ASM17039v1 NMRC GCA_000170395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/395/GCF_000170395.1_ASM17039v1/ na na na haploid bacteria 6555995 6555995 67.500000 0 803 803 NCBI RefSeq GCF_000170395.1-RS_2026_02_16 2026-02-16 6276 5831 56 na GCF_000170495.1 PRJNA224116 SAMN02470669 ABBM00000000.1 na 441157 430531 Burkholderia humptydooensis MSMB43 strain=MSMB43 na latest Contig Major Full 2007-06-06 ASM17049v1 NMRC GCA_000170495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/495/GCF_000170495.1_ASM17049v1/ na assembly from type material na haploid bacteria 6956166 6956166 67.000000 0 1230 1230 NCBI RefSeq GCF_000170495.1-RS_2025_08_18 2025-08-18 7178 6387 58 na GCF_000170555.1 PRJNA224116 SAMN02470661 ABBP00000000.1 na 441154 28450 Burkholderia pseudomallei 112 strain=112 na latest Contig Major Full 2007-06-06 ASM17055v1 NMRC GCA_000170555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/555/GCF_000170555.1_ASM17055v1/ na na na haploid bacteria 6919035 6919035 68.000000 0 1274 1274 NCBI RefSeq GCF_000170555.1-RS_2026_01_26 2026-01-26 6910 6332 62 na GCF_000170595.1 PRJNA224116 SAMN02470671 ABBR00000000.1 na 441152 28450 Burkholderia pseudomallei BCC215 strain=BCC215 na latest Contig Major Full 2007-06-06 ASM17059v1 NMRC GCA_000170595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/595/GCF_000170595.1_ASM17059v1/ na na na haploid bacteria 7000410 7000410 68.000000 0 1030 1030 NCBI RefSeq GCF_000170595.1-RS_2026_02_16 2026-02-16 6819 6339 58 na GCF_000170735.1 PRJNA224116 SAMN02436122 ABCJ00000000.1 na 391592 291048 Caminibacter mediatlanticus TB-2 strain=TB-2 na latest Contig Major Full 2007-06-19 ASM17073v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000170735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/735/GCF_000170735.1_ASM17073v1/ na assembly from type material na haploid bacteria 1663618 1663618 27.000000 0 35 35 NCBI RefSeq GCF_000170735.1-RS_2026_04_04 2026-04-04 1840 1752 74 22180817 GCF_000170755.1 PRJNA224116 SAMN02436148 ABCK00000000.1 reference genome 313628 256847 Lentisphaera araneosa HTCC2155 strain=HTCC2155 na latest Contig Major Full 2007-06-19 ASM17075v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000170755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/755/GCF_000170755.1_ASM17075v1/ na assembly from type material na haploid bacteria 6023180 6023180 41.000000 0 81 81 NCBI RefSeq GCF_000170755.1-RS_2026_03_27 2026-03-27 4982 4827 73 20363947 GCF_000170775.1 PRJNA224116 SAMN02436094 ABCL00000000.1 na 391613 391613 Roseovarius sp. TM1035 strain=TM1035 na latest Contig Major Full 2007-06-19 ASM17077v1 Moore Foundation GCA_000170775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/775/GCF_000170775.1_ASM17077v1/ na na na haploid bacteria 4209812 4209812 61.000000 0 15 15 NCBI RefSeq GCF_000170775.1-RS_2025_08_25 2025-08-25 4081 3982 60 na GCF_000170795.1 PRJNA224116 SAMN02436100 ABCM00000000.1 na 391596 391596 Pedobacter sp. BAL39 strain=BAL39 na latest Contig Major Full 2007-06-20 ASM17079v1 Moore Foundation GCA_000170795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/795/GCF_000170795.1_ASM17079v1/ na na na haploid bacteria 5788054 5788054 45.000000 0 47 47 NCBI RefSeq GCF_000170795.1-RS_2024_08_13 2024-08-13 4915 4806 85 na GCF_000170835.1 PRJNA224116 SAMN02436149 ABCP00000000.1 reference genome 443152 236100 Marinobacter algicola DG893 strain=DG893 na latest Contig Major Full 2007-06-21 ASM17083v1 Moore Foundation GCA_000170835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/835/GCF_000170835.1_ASM17083v1/ na assembly from type material na haploid bacteria 4413003 4413003 57.000000 0 104 104 NCBI RefSeq GCF_000170835.1-RS_2026_04_23 2026-04-23 4106 4010 56 na GCF_000170855.1 PRJNA224116 SAMN02436150 ABCQ00000000.1 na 58051 58051 Moritella sp. PE36 strain=PE36 na latest Contig Major Full 2007-06-26 ASM17085v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000170855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/855/GCF_000170855.1_ASM17085v1/ na na na haploid bacteria 5223088 5223088 41.000000 0 131 131 NCBI RefSeq GCF_000170855.1-RS_2024_08_13 2024-08-13 4772 4536 154 na GCF_000170875.1 PRJNA224116 SAMN02436151 ABCR00000000.1 na 351016 351016 Roseobacter sp. AzwK-3b strain=AzwK-3b na latest Contig Major Full 2007-06-26 ASM17087v1 Moore Foundation GCA_000170875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/875/GCF_000170875.1_ASM17087v1/ na na na haploid bacteria 4178704 4178704 62.000000 0 31 31 NCBI RefSeq GCF_000170875.1-RS_2024_07_01 2024-07-01 4072 3936 53 na GCF_000170895.1 PRJNA224116 SAMN02436152 ABCS00000000.1 reference genome 391625 191768 Plesiocystis pacifica SIR-1 strain=SIR-1 na latest Contig Major Full 2007-06-26 ASM17089v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000170895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/895/GCF_000170895.1_ASM17089v1/ na assembly from type material na haploid bacteria 10587646 10587646 70.500000 0 237 237 NCBI RefSeq GCF_000170895.1-RS_2026_03_30 2026-03-30 8393 8174 102 na GCF_000170915.1 PRJNA224116 SAMN02436153 ABCT00000000.1 na 391597 391597 Limnobacter sp. MED105 strain=MED105 na latest Contig Major Full 2007-06-26 ASM17091v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000170915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/915/GCF_000170915.1_ASM17091v1/ na na na haploid bacteria 3390271 3390271 52.000000 0 46 46 NCBI RefSeq GCF_000170915.1-RS_2024_08_13 2024-08-13 3185 3114 41 na GCF_000170935.2 PRJNA224116 SAMN02436235 ABCU00000000.2 na 445986 29518 Borreliella afzelii ACA-1 strain=ACA-1 na latest Contig Major Full 2008-12-09 ASM17093v2 J. Craig Venter Institute GCA_000170935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/935/GCF_000170935.2_ASM17093v2/ na na na haploid bacteria 1353819 1353819 28.000000 14 16 16 NCBI RefSeq GCF_000170935.2-RS_2025_09_06 2025-09-06 1382 1297 41 22123755 GCF_000170955.2 PRJNA224116 SAMN02436326 ABCY00000000.2 reference genome 445987 62088 Borreliella valaisiana VS116 strain=VS116 na latest Complete Genome Major Full 2009-03-04 ASM17095v2 J. Craig Venter Institute GCA_000170955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/955/GCF_000170955.2_ASM17095v2/ na assembly from type material na haploid bacteria 1258864 1258864 27.500000 12 12 12 NCBI RefSeq GCF_000170955.2-RS_2025_12_10 2025-12-10 1264 1161 40 22207749 GCF_000170995.1 PRJNA264113 SAMN02744059 ABDF00000000.2 reference genome 413071 29875 Trichoderma virens Gv29-8 strain=Gv29-8 na latest Scaffold Major Full 2011-11-29 TRIVI v2.0 DOE Joint Genome Institute GCA_000170995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/170/995/GCF_000170995.1_TRIVI_v2.0/ na na na haploid fungi 39022666 39022654 49.000000 0 93 94 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2023-12-29 12382 12382 0 21501500 GCF_000171055.1 PRJNA224116 SAMN02436237 ABDO00000000.2 na 445335 1491 Clostridium botulinum NCTC 2916 strain=NCTC 2916 na latest Contig Major Full 2007-10-09 ASM17105v1 J. Craig Venter Institute GCA_000171055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/055/GCF_000171055.1_ASM17105v1/ na na na haploid bacteria 4031357 4031357 28.500000 0 49 49 NCBI RefSeq GCF_000171055.1-RS_2026_04_21 2026-04-21 3823 3590 149 na GCF_000171075.1 PRJNA224116 SAMN02436292 ABDP00000000.1 na 445336 1491 Clostridium botulinum Bf strain=Bf na latest Contig Major Full 2007-07-11 ASM17107v1 J. Craig Venter Institute GCA_000171075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/075/GCF_000171075.1_ASM17107v1/ na na na haploid bacteria 4217754 4217754 28.000000 0 70 70 NCBI RefSeq GCF_000171075.1-RS_2026_04_26 2026-04-26 4128 3880 139 na GCF_000171115.1 PRJNA224116 SAMN02436238 ABDT00000000.1 na 447214 1492 Clostridium butyricum 5521 strain=5521 na latest Contig Major Full 2008-04-10 ASM17111v1 J. Craig Venter Institute GCA_000171115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/115/GCF_000171115.1_ASM17111v1/ na na na haploid bacteria 4540699 4540699 29.000000 0 123 123 NCBI RefSeq GCF_000171115.1-RS_2026_04_25 2026-04-25 4175 3958 141 24970833 GCF_000171135.1 PRJNA224116 SAMN02436294 ABDU00000000.1 na 445334 1502 Clostridium perfringens C str. JGS1495 strain=JGS1495 na latest Contig Major Full 2008-03-04 ASM17113v1 J. Craig Venter Institute GCA_000171135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/135/GCF_000171135.1_ASM17113v1/ na na na haploid bacteria 3661329 3661329 28.500000 0 84 84 NCBI RefSeq GCF_000171135.1-RS_2026_06_12 2026-06-12 3442 3215 160 na GCF_000171155.1 PRJNA224116 SAMN02436295 ABDV00000000.1 na 451754 1502 Clostridium perfringens B str. ATCC 3626 strain=ATCC 3626 na latest Contig Major Full 2007-07-11 ASM17115v1 J. Craig Venter Institute GCA_000171155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/155/GCF_000171155.1_ASM17115v1/ na na na haploid bacteria 3896305 3896305 28.500000 0 98 98 NCBI RefSeq GCF_000171155.1-RS_2026_06_16 2026-06-16 3640 3443 129 na GCF_000171175.1 PRJNA224116 SAMN02436167 ABDW00000000.1 na 451755 1502 Clostridium perfringens E str. JGS1987 strain=JGS1987 na latest Contig Major Full 2007-07-11 ASM17117v1 J. Craig Venter Institute GCA_000171175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/175/GCF_000171175.1_ASM17117v1/ na na na haploid bacteria 4127102 4127102 28.000000 0 101 101 NCBI RefSeq GCF_000171175.1-RS_2026_06_16 2026-06-16 3997 3770 150 na GCF_000171195.1 PRJNA224116 SAMN02436168 ABDX00000000.1 na 451756 1502 Clostridium perfringens CPE str. F4969 strain=F4969 na latest Contig Major Full 2007-07-11 ASM17119v1 J. Craig Venter Institute GCA_000171195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/195/GCF_000171195.1_ASM17119v1/ na na na haploid bacteria 3510272 3510272 28.500000 0 74 74 NCBI RefSeq GCF_000171195.1-RS_2026_04_17 2026-04-17 3254 3069 149 na GCF_000171215.1 PRJNA224116 SAMN02436239 ABDY00000000.1 na 451757 1502 Clostridium perfringens NCTC 8239 strain=str. NCTC 8239 na latest Contig Major Full 2007-07-11 ASM17121v1 J. Craig Venter Institute GCA_000171215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/215/GCF_000171215.1_ASM17121v1/ na na na haploid bacteria 3324319 3324319 28.500000 0 55 55 NCBI RefSeq GCF_000171215.1-RS_2026_04_30 2026-04-30 3022 2854 145 na GCF_000171235.2 PRJNA224116 SAMN02256391 ABEA00000000.3 reference genome 278957 1148786 Geminisphaera colitermitum TAV2 strain=TAV2 na latest Contig Major Full 2013-04-26 ASM17123v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000171235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/235/GCF_000171235.2_ASM17123v2/ na assembly from type material na haploid bacteria 5671497 5671497 61.000000 0 225 225 NCBI RefSeq GCF_000171235.2-RS_2026_05_13 2026-05-13 5079 4850 77 na GCF_000171255.1 PRJNA224116 SAMN02415242 ABEH00000000.2 na 454167 28901 Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433 strain=GA_MM04042433 na latest Contig Major Full 2008-09-18 ASM17125v1 TIGR/J. Craig Venter Institute GCA_000171255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/255/GCF_000171255.1_ASM17125v1/ na na na haploid bacteria 4546142 4546142 52.000000 0 19 19 NCBI RefSeq GCF_000171255.1-RS_2025_08_25 2025-08-25 4427 4168 106 na GCF_000171275.1 PRJNA224116 SAMN02415243 ABEI00000000.1 na 454231 28901 Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191 strain=CDC 191 na latest Contig Major Full 2007-07-20 ASM17127v1 TIGR/J. Craig Venter Institute GCA_000171275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/275/GCF_000171275.1_ASM17127v1/ na na na haploid bacteria 4696566 4696566 52.000000 0 53 53 NCBI RefSeq GCF_000171275.1-RS_2025_04_15 2025-04-15 4503 4297 53 21602358 GCF_000171295.1 PRJNA224116 SAMN02415244 ABEJ00000000.1 na 454165 28901 Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 strain=SL480 na latest Contig Major Full 2007-07-20 ASM17129v1 TIGR/J. Craig Venter Institute GCA_000171295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/295/GCF_000171295.1_ASM17129v1/ na na na haploid bacteria 4761576 4761576 52.000000 0 67 67 NCBI RefSeq GCF_000171295.1-RS_2025_04_15 2025-04-15 4702 4456 60 21602358 GCF_000171315.1 PRJNA224116 SAMN02415245 ABEL00000000.1 na 454164 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. SL486 strain=SL486 na latest Contig Major Full 2007-07-20 ASM17131v1 TIGR/JCVI GCA_000171315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/315/GCF_000171315.1_ASM17131v1/ na na na haploid bacteria 4728232 4728232 52.000000 0 48 48 NCBI RefSeq GCF_000171315.1-RS_2025_04_15 2025-04-15 4599 4395 62 21602358 GCF_000171335.1 PRJNA224116 SAMN02436323 ABEQ00000000.1 na 420336 420336 Candidatus Epulonipiscium viviparus strain=N.t. morphotype B na latest Contig Major Full 2007-08-08 ASM17133v1 J. Craig Venter Institute GCA_000171335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/335/GCF_000171335.1_ASM17133v1/ na na na haploid bacteria 2686047 2686047 38.000000 0 92 92 NCBI RefSeq GCF_000171335.1-RS_2026_02_27 2026-02-27 2159 2088 46 na GCF_000171355.1 PRJNA224116 SAMN02436240 ABER00000000.1 na 515609 134821 Ureaplasma parvum serovar 14 str. ATCC 33697 strain=ATCC 33697 na latest Contig Major Full 2007-08-08 ASM17135v1 J. Craig Venter Institute GCA_000171355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/355/GCF_000171355.1_ASM17135v1/ na na na haploid bacteria 749965 749965 25.500000 0 8 8 NCBI RefSeq GCF_000171355.1-RS_2026_02_26 2026-02-26 636 581 42 na GCF_000171375.1 PRJNA224116 SAMN02436169 ABES00000000.1 na 515608 134821 Ureaplasma parvum serovar 1 str. ATCC 27813 strain=ATCC 27813 na latest Contig Major Full 2007-08-08 ASM17137v1 J. Craig Venter Institute GCA_000171375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/375/GCF_000171375.1_ASM17137v1/ na na na haploid bacteria 753674 753674 25.500000 0 12 12 NCBI RefSeq GCF_000171375.1-RS_2026_02_26 2026-02-26 639 584 39 na GCF_000171395.1 PRJNA224116 SAMN02436170 ABEV00000000.1 na 515611 2130 Ureaplasma urealyticum serovar 13 str. ATCC 33698 strain=ATCC 33698 na latest Contig Major Full 2007-08-15 ASM17139v1 J. Craig Venter Institute GCA_000171395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/395/GCF_000171395.1_ASM17139v1/ na na na haploid bacteria 846596 846596 26.000000 0 5 5 NCBI RefSeq GCF_000171395.1-RS_2026_02_27 2026-02-27 696 647 39 na GCF_000171415.1 PRJNA224116 SAMN02415246 ABEW00000000.1 na 454168 28901 Salmonella enterica subsp. enterica serovar Newport str. SL317 strain=SL317 na latest Contig Major Full 2007-08-15 ASM17141v1 TIGR/J. Craig Venter Institute GCA_000171415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/415/GCF_000171415.1_ASM17141v1/ na na na haploid bacteria 4948011 4948011 52.000000 0 63 63 NCBI RefSeq GCF_000171415.1-RS_2025_04_15 2025-04-15 4894 4640 82 21602358 GCF_000171435.1 PRJNA224116 SAMN02471355 ABFA00000000.1 na 452948 1280 Staphylococcus aureus 930918-3 strain=930918-3 na latest Contig Major Full 2009-09-24 ASM17143v1 University of Central Florida GCA_000171435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/435/GCF_000171435.1_ASM17143v1/ na na na haploid bacteria 2923460 2923460 32.500000 0 736 736 NCBI RefSeq GCF_000171435.1-RS_2025_08_23 2025-08-23 2995 2764 61 18808706 GCF_000171455.1 PRJNA224116 SAMN02471356 ABFB00000000.1 na 455227 1280 Staphylococcus aureus D30 strain=D30 na latest Contig Major Full 2009-09-24 ASM17145v1 University of Central Florida GCA_000171455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/455/GCF_000171455.1_ASM17145v1/ na na na haploid bacteria 2775621 2775621 32.500000 0 463 463 NCBI RefSeq GCF_000171455.1-RS_2025_06_03 2025-06-03 2760 2590 65 18808706 GCF_000171495.1 PRJNA224116 SAMN02415247 ABFF00000000.1 na 465518 28901 Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 strain=HI_N05-537 na latest Contig Major Full 2007-08-31 ASM17149v1 TIGR/JCVI GCA_000171495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/495/GCF_000171495.1_ASM17149v1/ na na na haploid bacteria 5047463 5047463 52.000000 0 81 81 NCBI RefSeq GCF_000171495.1-RS_2025_04_15 2025-04-15 4930 4654 60 21602358 GCF_000171515.1 PRJNA224116 SAMN02415248 ABFG00000000.1 na 465516 28901 Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 strain=RI_05P066 na latest Contig Major Full 2007-08-31 ASM17151v1 TIGR/JCVI GCA_000171515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/515/GCF_000171515.1_ASM17151v1/ na na na haploid bacteria 4793325 4793325 52.500000 0 50 50 NCBI RefSeq GCF_000171515.1-RS_2025_09_18 2025-09-18 4696 4406 133 21602358 GCF_000171535.2 PRJNA224116 SAMN02415249 ABFH00000000.2 na 465517 28901 Salmonella enterica subsp. enterica serovar Virchow str. SL491 strain=SL491 na latest Contig Major Full 2008-09-12 ASM17153v2 TIGR/JCVI GCA_000171535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/535/GCF_000171535.2_ASM17153v2/ na na na haploid bacteria 4876885 4876885 52.000000 2 5 5 NCBI RefSeq GCF_000171535.2-RS_2025_04_26 2025-04-26 4805 4538 121 21602358 GCF_000171555.1 PRJNA224116 SAMN02436279 ABFL00000000.2 na 626096 2130 Ureaplasma urealyticum serovar 2 str. ATCC 27814 strain=ATCC 27814 na latest Contig Major Full 2009-03-19 ASM17155v1 J. Craig Venter Institute GCA_000171555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/555/GCF_000171555.1_ASM17155v1/ na na na haploid bacteria 870038 870038 26.000000 0 9 9 NCBI RefSeq GCF_000171555.1-RS_2026_02_26 2026-02-26 695 637 39 na GCF_000171575.1 PRJNA224116 SAMN00000215 ABFS00000000.1 na 453362 1313 Streptococcus pneumoniae CDC1873-00 strain=CDC1873-00 na latest Contig Major Full 2007-09-20 ASM17157v1 J. Craig Venter Institute GCA_000171575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/575/GCF_000171575.1_ASM17157v1/ na na na haploid bacteria 2263323 2263323 39.500000 0 53 53 NCBI RefSeq GCF_000171575.1-RS_2026_02_16 2026-02-16 2386 2102 80 na GCF_000171615.1 PRJNA224116 SAMN02470227 ABFU00000000.1 na 441769 408580 Bacillus coahuilensis m4-4 strain=m4-4 na latest Contig Major Full 2008-03-20 ASM17161v1 LANGEBIO Laboratorio Nacional de Genomica para la Biodiversidad (National Laboratory of Genomics for Biodiversity), Mexico GCA_000171615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/615/GCF_000171615.1_ASM17161v1/ na assembly from type material na haploid bacteria 3381351 3381351 38.000000 0 138 138 NCBI RefSeq GCF_000171615.1-RS_2026_03_20 2026-03-20 3915 3182 111 18408155 GCF_000171635.1 PRJNA224116 SAMN02470651 ABFV00000000.1 na 405948 1836 Saccharopolyspora erythraea NRRL 2338 strain=NRRL 2338 na latest Contig Major Full 2009-09-04 ASM17163v1 Istituto Tecnologie Biomediche -National Research Council GCA_000171635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/635/GCF_000171635.1_ASM17163v1/ na assembly from type material na haploid bacteria 8079083 8079083 71.000000 0 241 241 NCBI RefSeq GCF_000171635.1-RS_2026_04_06 2026-04-06 7390 7053 54 na GCF_000171655.1 PRJNA224116 SAMN00000216 ABGE00000000.1 na 453363 1313 Streptococcus pneumoniae SP195 strain=SP195 na latest Contig Major Full 2007-10-09 ASM17165v1 J. Craig Venter Institute GCA_000171655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/655/GCF_000171655.1_ASM17165v1/ na na na haploid bacteria 2196854 2196854 39.500000 0 41 41 NCBI RefSeq GCF_000171655.1-RS_2026_02_16 2026-02-16 2305 2027 85 na GCF_000171675.1 PRJNA224116 SAMN00000217 ABGF00000000.1 na 453364 1313 Streptococcus pneumoniae CDC0288-04 strain=CDC0288-04 na latest Contig Major Full 2007-10-09 ASM17167v1 J. Craig Venter Institute GCA_000171675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/675/GCF_000171675.1_ASM17167v1/ na na na haploid bacteria 2049808 2049808 40.000000 0 38 38 NCBI RefSeq GCF_000171675.1-RS_2026_02_16 2026-02-16 2128 1845 104 na GCF_000171695.1 PRJNA224116 SAMN00000220 ABGG00000000.1 na 453365 1313 Streptococcus pneumoniae CDC3059-06 strain=CDC3059-06 na latest Contig Major Full 2007-10-09 ASM17169v1 J. Craig Venter Institute GCA_000171695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/695/GCF_000171695.1_ASM17169v1/ na na na haploid bacteria 2292125 2292125 40.000000 0 33 33 NCBI RefSeq GCF_000171695.1-RS_2026_02_16 2026-02-16 2391 2129 94 na GCF_000171715.1 PRJNA224116 SAMN00000218 ABGH00000000.1 na 453366 1313 Streptococcus pneumoniae MLV-016 strain=MLV-016 na latest Contig Major Full 2007-10-09 ASM17171v1 J. Craig Venter Institute GCA_000171715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/715/GCF_000171715.1_ASM17171v1/ na na na haploid bacteria 2242383 2242383 40.000000 0 126 126 NCBI RefSeq GCF_000171715.1-RS_2026_02_16 2026-02-16 2331 2014 103 na GCF_000171735.2 PRJNA224116 SAMN02436228 ABGI00000000.2 na 476210 139 Borreliella burgdorferi 118a strain=118a na latest Contig Major Full 2009-03-23 ASM17173v2 J. Craig Venter Institute GCA_000171735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/735/GCF_000171735.2_ASM17173v2/ na na na haploid bacteria 1453013 1453013 28.000000 19 27 27 NCBI RefSeq GCF_000171735.2-RS_2026_03_21 2026-03-21 1512 1412 35 20935092 GCF_000171755.2 PRJNA224116 SAMN02436171 ABGJ00000000.2 na 476211 139 Borreliella burgdorferi 72a strain=72a na latest Contig Major Full 2009-01-23 ASM17175v2 J. Craig Venter Institute GCA_000171755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/755/GCF_000171755.2_ASM17175v2/ na na na haploid bacteria 1267789 1267789 28.000000 13 19 19 NCBI RefSeq GCF_000171755.2-RS_2026_03_03 2026-03-03 1309 1219 39 20935092 GCF_000171795.2 PRJNA224116 SAMN02470701 na na 478547 197 Campylobacter jejuni subsp. jejuni CG8421 strain=CG8421 na latest Complete Genome Major Full 2014-05-01 ASM17179v2 Naval Medical Research Center GCA_000171795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/795/GCF_000171795.2_ASM17179v2/ na na na haploid bacteria 1636029 1636029 30.500000 1 1 1 NCBI RefSeq GCF_000171795.2-RS_2025_06_29 2025-06-29 1720 1586 55 18809665 GCF_000171815.1 PRJNA224116 SAMN02436117 ABGR00000000.1 na 314289 314289 Vibrio sp. AND4 strain=AND4 na latest Contig Major Full 2007-11-07 ASM17181v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000171815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/815/GCF_000171815.1_ASM17181v1/ na na na haploid bacteria 4255798 4255798 44.500000 0 143 143 NCBI RefSeq GCF_000171815.1-RS_2024_05_02 2024-05-02 3888 3667 101 20436956 GCF_000171855.1 PRJNA224116 SAMN02436145 ABHH00000000.1 na 333990 333990 Carnobacterium sp. AT7 strain=AT7 na latest Contig Major Full 2007-11-09 ASM17185v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000171855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/855/GCF_000171855.1_ASM17185v1/ na na na haploid bacteria 2442118 2442118 35.500000 0 69 69 NCBI RefSeq GCF_000171855.1-RS_2025_08_25 2025-08-25 2427 2271 105 na GCF_000171895.1 PRJNA224116 SAMN02436118 ABHJ00000000.1 na 392423 392423 Hydrogenivirga sp. 128-5-R1-1 strain=128-5-R1-1 na latest Contig Major Full 2007-11-09 ASM17189v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000171895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/895/GCF_000171895.1_ASM17189v1/ na na na haploid bacteria 3038240 3038240 44.000000 0 551 551 NCBI RefSeq GCF_000171895.1-RS_2024_05_05 2024-05-05 3714 3470 70 19136599 GCF_000171915.1 PRJNA224116 SAMN02436280 ABHO00000000.1 na 444451 562 Escherichia coli O157:H7 str. EC4196 strain=EC4196 na latest Contig Major Full 2007-11-08 ASM17191v1 J. Craig Venter Institute GCA_000171915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/915/GCF_000171915.1_ASM17191v1/ na na na haploid bacteria 5620606 5620606 50.500000 0 186 186 NCBI RefSeq GCF_000171915.1-RS_2025_06_13 2025-06-13 5768 5177 133 na GCF_000171955.1 PRJNA224116 SAMN02436230 ABHQ00000000.1 na 444453 562 Escherichia coli O157:H7 str. EC4076 strain=EC4076 na latest Contig Major Full 2007-11-08 ASM17195v1 J. Craig Venter Institute GCA_000171955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/955/GCF_000171955.1_ASM17195v1/ na na na haploid bacteria 5705645 5705645 50.500000 0 135 135 NCBI RefSeq GCF_000171955.1-RS_2025_06_13 2025-06-13 5851 5288 149 na GCF_000171975.1 PRJNA224116 SAMN02436281 ABHR00000000.1 na 478004 562 Escherichia coli O157:H7 str. EC4401 strain=EC4401 na latest Contig Major Full 2007-11-08 ASM17197v1 J. Craig Venter Institute GCA_000171975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/975/GCF_000171975.1_ASM17197v1/ na na na haploid bacteria 5733133 5733133 50.500000 0 186 186 NCBI RefSeq GCF_000171975.1-RS_2025_06_13 2025-06-13 5916 5327 132 na GCF_000171995.1 PRJNA224116 SAMN02436174 ABHS00000000.1 na 478005 562 Escherichia coli O157:H7 str. EC4486 strain=EC4486 na latest Contig Major Full 2007-11-08 ASM17199v1 J. Craig Venter Institute GCA_000171995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/171/995/GCF_000171995.1_ASM17199v1/ na na na haploid bacteria 5933166 5933166 50.500000 0 165 165 NCBI RefSeq GCF_000171995.1-RS_2025_06_13 2025-06-13 6118 5505 142 na GCF_000172035.1 PRJNA224116 SAMN02436283 ABHU00000000.1 na 478008 562 Escherichia coli O157:H7 str. EC869 strain=EC869 na latest Contig Major Full 2007-11-08 ASM17203v1 J. Craig Venter Institute GCA_000172035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/035/GCF_000172035.1_ASM17203v1/ na na na haploid bacteria 5731065 5731065 50.500000 0 147 147 NCBI RefSeq GCF_000172035.1-RS_2025_04_26 2025-04-26 5890 5326 130 21421787 GCF_000172055.1 PRJNA224116 SAMN02436284 ABHW00000000.1 na 478007 562 Escherichia coli O157:H7 str. EC508 strain=EC508 na latest Contig Major Full 2007-11-15 ASM17205v1 J. Craig Venter Institute GCA_000172055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/055/GCF_000172055.1_ASM17205v1/ na na na haploid bacteria 5656666 5656666 50.500000 0 272 272 NCBI RefSeq GCF_000172055.1-RS_2025_07_12 2025-07-12 5863 5195 122 na GCF_000172075.1 PRJNA224116 SAMN02436096 ABIC00000000.1 na 314608 43661 Shewanella benthica KT99 strain=KT99 na latest Contig Major Full 2007-11-28 ASM17207v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000172075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/075/GCF_000172075.1_ASM17207v1/ na na na haploid bacteria 4351589 4351589 46.000000 0 129 129 NCBI RefSeq GCF_000172075.1-RS_2025_08_25 2025-08-25 4115 3599 132 na GCF_000172095.1 PRJNA224116 SAMN02436097 ABID00000000.1 na 391624 225422 Sulfitobacter indolifex HEL-45 strain=HEL-45 na latest Contig Major Full 2007-11-30 ASM17209v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project GCA_000172095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/095/GCF_000172095.1_ASM17209v1/ na assembly from type material na haploid bacteria 4105524 4105524 59.500000 0 105 105 NCBI RefSeq GCF_000172095.1-RS_2026_04_23 2026-04-23 4094 3951 60 na GCF_000172115.1 PRJNA224116 SAMN02470538 ABIN00000000.1 na 487521 1767 Mycobacterium intracellulare ATCC 13950 strain=ATCC 13950 na latest Contig Major Full 2007-12-10 ASM17211v1 McGill University GCA_000172115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/115/GCF_000172115.1_ASM17211v1/ na assembly from type material na haploid bacteria 5328562 5328562 68.000000 0 353 353 NCBI RefSeq GCF_000172115.1-RS_2026_02_15 2026-02-15 5273 4997 51 na GCF_000172135.1 PRJNA224116 SAMN00000021 ABIX00000000.2 na 473819 1689 Bifidobacterium dentium ATCC 27678 strain=ATCC 27678 na latest Contig Major Full 2008-03-13 ASM17213v1 Washington University Genome Sequencing Center GCA_000172135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/135/GCF_000172135.1_ASM17213v1/ na na na haploid bacteria 2642081 2642081 58.500000 0 2 2 NCBI RefSeq GCF_000172135.1-RS_2026_03_31 2026-03-31 2199 2106 72 na GCF_000172155.1 PRJNA224116 SAMN02436175 ABIZ00000000.1 reference genome 240016 2736 Verrucomicrobium spinosum DSM 4136 = JCM 18804 strain=DSM 4136 na latest Complete Genome Major Full 2008-01-02 ASM17215v1 TIGR GCA_000172155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/155/GCF_000172155.1_ASM17215v1/ na assembly from type material na haploid bacteria 8220857 8220857 60.500000 1 1 1 NCBI RefSeq GCF_000172155.1-RS_2026_05_05 2026-05-05 6314 6181 78 na GCF_000172175.1 PRJNA224116 SAMN00000015 ABJL00000000.2 reference genome 471870 329854 Bacteroides intestinalis DSM 17393 strain=DSM 17393 na latest Contig Major Full 2008-04-04 ASM17217v1 Washington University Genome Sequencing Center GCA_000172175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/175/GCF_000172175.1_ASM17217v1/ na assembly from type material na haploid bacteria 6052596 6052596 43.000000 0 8 8 NCBI RefSeq GCF_000172175.1-RS_2025_12_22 2025-12-22 4696 4532 75 na GCF_000172275.2 PRJNA224116 SAMN02436232 ABJV00000000.2 na 498743 29519 Borreliella garinii PBr strain=PBr na latest Contig Major Full 2009-01-07 ASM17227v2 J. Craig Venter Institute GCA_000172275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/275/GCF_000172275.2_ASM17227v2/ na na na haploid bacteria 1265591 1265591 28.000000 11 16 16 NCBI RefSeq GCF_000172275.2-RS_2026_03_03 2026-03-03 1247 1149 41 22123755 GCF_000172295.2 PRJNA224116 SAMN02436321 ABJX00000000.2 na 498738 139 Borreliella burgdorferi 29805 strain=29805 na latest Contig Major Full 2009-04-01 ASM17229v2 J. Craig Venter Institute GCA_000172295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/295/GCF_000172295.2_ASM17229v2/ na na na haploid bacteria 1344204 1344204 28.500000 15 53 53 NCBI RefSeq GCF_000172295.2-RS_2026_03_21 2026-03-21 1377 1245 39 20935092 GCF_000172315.2 PRJNA224116 SAMN02436176 ABJY00000000.2 na 498739 139 Borreliella burgdorferi CA-11.2A strain=CA-11.2A na latest Contig Major Full 2009-03-05 ASM17231v2 J. Craig Venter Institute GCA_000172315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/315/GCF_000172315.2_ASM17231v2/ na na na haploid bacteria 1294354 1294354 28.500000 12 26 26 NCBI RefSeq GCF_000172315.2-RS_2026_03_21 2026-03-21 1314 1222 43 20935092 GCF_000172335.2 PRJNA224116 SAMN02436287 ABKA00000000.2 na 498740 139 Borreliella burgdorferi 64b strain=64b na latest Contig Major Full 2009-02-20 ASM17233v2 J. Craig Venter Institute GCA_000172335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/335/GCF_000172335.2_ASM17233v2/ na na na haploid bacteria 1485884 1485884 28.500000 18 24 24 NCBI RefSeq GCF_000172335.2-RS_2026_03_21 2026-03-21 1526 1430 36 20935092 GCF_000172395.1 PRJNA224116 SAMN00000299 ABKZ00000000.1 na 509633 287 Pseudomonas aeruginosa PAb1 strain=PAb1 na latest Contig Major Full 2009-09-15 ASM17239v1 The University of Maryland Center For Bioinformatics & Computational Biology GCA_000172395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/395/GCF_000172395.1_ASM17239v1/ na na na haploid bacteria 6078600 6078600 67.000000 0 658 658 NCBI RefSeq GCF_000172395.1-RS_2025_05_16 2025-05-16 6042 5696 81 18818729 GCF_000172415.1 PRJNA224116 SAMN02441790 ABLD00000000.1 na 396598 60548 Paraburkholderia graminis C4D1M strain=C4D1M na latest Contig Major Full 2008-03-17 ASM17241v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000172415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/415/GCF_000172415.1_ASM17241v1/ na assembly from type material na haploid bacteria 7477263 7477263 63.000000 0 70 70 NCBI RefSeq GCF_000172415.1-RS_2026_02_15 2026-02-15 6733 6437 54 na GCF_000172455.1 PRJNA224116 SAMN02436277 ABOO00000000.1 na 488537 1502 Clostridium perfringens D str. JGS1721 strain=JGS1721 na latest Contig Major Full 2008-04-08 ASM17245v1 J. Craig Venter Institute GCA_000172455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/455/GCF_000172455.1_ASM17245v1/ na na na haploid bacteria 4045016 4045016 28.500000 0 221 221 NCBI RefSeq GCF_000172455.1-RS_2026_06_22 2026-06-22 3842 3531 143 na GCF_000172495.1 PRJNA224116 SAMN02436659 ABOQ00000000.1 na 517437 770 Anaplasma marginale str. Puerto Rico strain=Puerto Rico na latest Contig Major Full 2009-01-30 ASM17249v1 Washington State University GCA_000172495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/495/GCF_000172495.1_ASM17249v1/ na na na haploid bacteria 1158530 1158530 50.000000 0 59 59 NCBI RefSeq GCF_000172495.1-RS_2026_01_08 2026-01-08 1035 915 44 19134224 GCF_000172535.2 PRJNA224116 SAMN02469791 ABOT00000000.2 na 486409 28025 Bifidobacterium animalis subsp. lactis HN019 strain=HN019 na latest Complete Genome Major Full 2026-02-16 ASM17253v2 Fonterra Research Centre GCA_000172535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/535/GCF_000172535.2_ASM17253v2/ na na na haploid bacteria 1935436 1935436 60.500000 1 1 1 NCBI RefSeq GCF_000172535.2-RS_2026_02_17 2026-02-17 1621 1538 64 na GCF_000172555.1 PRJNA224116 SAMN00000631 ABOX00000000.2 reference genome 320771 1032527 Pedosphaera parvula Ellin514 strain=Ellin514 na latest Contig Major Full 2009-02-20 ASM17255v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000172555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/555/GCF_000172555.1_ASM17255v1/ na assembly from type material na haploid bacteria 7414222 7414222 52.500000 0 102 102 NCBI RefSeq GCF_000172555.1-RS_2026_06_22 2026-06-22 6121 5977 70 21460084 GCF_000172575.2 PRJNA224116 SAMN02603002 na na 474186 1351 Enterococcus faecalis OG1RF strain=OG1RF na latest Complete Genome Major Full 2011-04-06 ASM17257v2 Baylor College of Medicine GCA_000172575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/575/GCF_000172575.2_ASM17257v2/ na na na haploid bacteria 2739625 2739625 38.000000 1 1 1 NCBI RefSeq GCF_000172575.2-RS_2025_06_20 2025-06-20 2590 2501 74 na GCF_000172595.4 PRJNA224116 SAMN02436278 ABPZ00000000.2 na 519049 29519 Borreliella garinii Far04 strain=Far04 na latest Contig Major Full 2009-01-07 ASM17259v2 J Craig Venter Institute GCA_000172595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/595/GCF_000172595.4_ASM17259v2/ na na na haploid bacteria 1127440 1127440 28.000000 7 40 40 NCBI RefSeq GCF_000172595.4-RS_2024_09_03 2024-09-03 1118 972 37 22123755 GCF_000172615.1 PRJNA224116 SAMN02471501 ABQA00000000.1 na 529885 1352 Enterococcus faecium E980 strain=E980 na latest Contig Major Full 2010-03-26 ASM17261v1 Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands GCA_000172615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/615/GCF_000172615.1_ASM17261v1/ na na na haploid bacteria 2792626 2792626 38.000000 0 131 131 NCBI RefSeq GCF_000172615.1-RS_2026_01_22 2026-01-22 2808 2601 65 20398277 GCF_000172635.2 PRJNA224116 SAMN02603229 na na 529120 28108 Alteromonas macleodii ATCC 27126 strain=ATCC 27126 na latest Complete Genome Major Full 2012-09-21 ASM17263v2 Evolucinary Genomics Group, Universidad Miguel Hernandez GCA_000172635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/635/GCF_000172635.2_ASM17263v2/ na assembly from type material na haploid bacteria 4653851 4653851 44.500000 1 1 1 NCBI RefSeq GCF_000172635.2-RS_2026_02_15 2026-02-15 3963 3834 72 18670397;23209244 GCF_000172655.1 PRJNA224116 SAMN02471502 ABQI00000000.1 na 535205 1352 Enterococcus faecium E1071 strain=E1071 na latest Contig Major Full 2010-03-26 ASM17265v1 Dept. of Medical Microbiology, University Medical Center Utrecht GCA_000172655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/655/GCF_000172655.1_ASM17265v1/ na na na haploid bacteria 2700770 2700770 38.000000 0 96 96 NCBI RefSeq GCF_000172655.1-RS_2026_01_20 2026-01-20 2677 2501 64 20398277 GCF_000172675.1 PRJNA224116 SAMN02471503 ABQJ00000000.1 na 535206 1352 Enterococcus faecium E1162 strain=E1162 na latest Contig Major Full 2010-03-26 ASM17267v1 Dept. of Medical Microbiology, University Medical Center Utrecht GCA_000172675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/675/GCF_000172675.1_ASM17267v1/ na na na haploid bacteria 2711396 2711396 38.000000 0 139 139 NCBI RefSeq GCF_000172675.1-RS_2026_01_19 2026-01-19 2682 2545 64 20398277 GCF_000172695.2 PRJNA224116 SAMN02469451 na na 2020311 2020311 Rhizobium sp. Kim5 strain=Kim5 na latest Complete Genome Major Full 2017-05-11 ASM17269v2 Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico GCA_000172695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/695/GCF_000172695.2_ASM17269v2/ na na na haploid bacteria 6817255 6817255 61.000000 5 5 5 NCBI RefSeq GCF_000172695.2-RS_2024_06_04 2024-06-04 6629 6304 66 na GCF_000172715.2 PRJNA224116 SAMN02469449 na na 526949 396 Rhizobium phaseoli Brasil 5 strain=Bra5 na latest Complete Genome Major Full 2017-04-27 ASM17271v2 Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico GCA_000172715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/715/GCF_000172715.2_ASM17271v2/ na na na haploid bacteria 6665454 6665454 61.500000 5 5 5 NCBI RefSeq GCF_000172715.2-RS_2026_03_05 2026-03-05 6468 6197 64 na GCF_000172795.2 PRJNA224116 SAMN02469455 na na 2020312 2020312 Rhizobium sp. CIAT894 strain=CIAT894 na latest Complete Genome Major Full 2017-05-01 ASM17279v2 Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico GCA_000172795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/795/GCF_000172795.2_ASM17279v2/ na na na haploid bacteria 6657947 6657947 61.000000 6 6 6 NCBI RefSeq GCF_000172795.2-RS_2024_06_04 2024-06-04 6401 6123 63 na GCF_000172815.1 PRJNA224116 SAMN02470256 ABRX00000000.1 na 536229 1408 Bacillus pumilus ATCC 7061 strain=ATCC 7061 na latest Contig Major Full 2008-07-09 ASM17281v1 J. Craig Venter Institute GCA_000172815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/815/GCF_000172815.1_ASM17281v1/ na assembly from type material na haploid bacteria 3833998 3833998 41.500000 0 16 16 NCBI RefSeq GCF_000172815.1-RS_2026_03_20 2026-03-20 3992 3795 88 na GCF_000172835.1 PRJNA224116 SAMN02471514 ABRY00000000.1 na 544875 1352 Enterococcus faecium E1636 strain=E1636 na latest Contig Major Full 2010-03-26 ASM17283v1 Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands GCA_000172835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/835/GCF_000172835.1_ASM17283v1/ na na na haploid bacteria 2838335 2838335 38.000000 0 223 223 NCBI RefSeq GCF_000172835.1-RS_2026_01_22 2026-01-22 2886 2625 68 20398277 GCF_000172855.1 PRJNA224116 SAMN02470553 ABSA00000000.1 na 546343 1280 Staphylococcus aureus subsp. aureus str. JKD6009 strain=JKD6009 na latest Contig Major Full 2008-07-10 ASM17285v1 Monash University GCA_000172855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/855/GCF_000172855.1_ASM17285v1/ na na na haploid bacteria 2819448 2819448 32.500000 0 129 129 NCBI RefSeq GCF_000172855.1-RS_2025_08_25 2025-08-25 2852 2724 18 na GCF_000172875.1 PRJNA224116 SAMN02471504 ABSC00000000.1 na 546340 1352 Enterococcus faecium E1679 strain=E1679 na latest Contig Major Full 2010-03-26 ASM17287v1 Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands GCA_000172875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/875/GCF_000172875.1_ASM17287v1/ na na na haploid bacteria 2928184 2928184 37.500000 0 340 340 NCBI RefSeq GCF_000172875.1-RS_2026_01_21 2026-01-21 2991 2737 62 20398277 GCF_000172895.1 PRJNA224116 SAMN02472090 ABSM00000000.1 na 546231 251701 Pseudomonas syringae pv. tomato T1 strain=T1 na latest Contig Major Full 2008-11-21 ASM17289v1 The Sainsbury Laboratory GCA_000172895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/895/GCF_000172895.1_ASM17289v1/ na na na haploid bacteria 6145942 6145942 58.500000 0 122 122 NCBI RefSeq GCF_000172895.1-RS_2026_04_03 2026-04-03 5728 5457 63 19061402 GCF_000172915.1 PRJNA224116 SAMN02471515 ABSW00000000.1 na 547468 1352 Enterococcus faecium U0317 strain=U0317 na latest Contig Major Full 2010-03-26 ASM17291v1 Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands GCA_000172915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/915/GCF_000172915.1_ASM17291v1/ na na na haploid bacteria 2893029 2893029 37.500000 0 227 227 NCBI RefSeq GCF_000172915.1-RS_2026_01_21 2026-01-21 2930 2718 64 20398277 GCF_000172975.1 PRJNA224116 SAMN02441810 ABTR00000000.2 reference genome 469381 47055 Dethiosulfovibrio peptidovorans DSM 11002 strain=DSM 11002 na latest Contig Major Full 2010-02-10 ASM17297v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000172975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/975/GCF_000172975.1_ASM17297v1/ na assembly from type material na haploid bacteria 2576359 2576359 54.500000 0 3 3 NCBI RefSeq GCF_000172975.1-RS_2026_03_30 2026-03-30 2541 2446 73 21304695 GCF_000172995.2 PRJNA224116 SAMN00002580 na reference genome 469382 60847 Halogeometricum borinquense DSM 11551 strain=DSM 11551 na latest Complete Genome Major Full 2010-11-22 ASM17299v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000172995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/172/995/GCF_000172995.2_ASM17299v2/ na assembly from type material na haploid archaea 3944467 3944467 60.000000 6 6 6 NCBI RefSeq GCF_000172995.2-RS_2025_12_02 2025-12-02 3946 3821 60 21304651 GCF_000173075.1 PRJNA224116 SAMN00000678 ABVL00000000.1 na 497964 191863 Chthoniobacter flavus Ellin428 strain=Ellin428 na latest Scaffold Major Full 2008-08-15 ASM17307v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000173075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/075/GCF_000173075.1_ASM17307v1/ na assembly from type material na haploid bacteria 7848700 7848640 61.000000 0 62 65 NCBI RefSeq GCF_000173075.1-RS_2026_03_20 2026-03-20 6679 6450 65 21460085 GCF_000173135.1 PRJNA224116 SAMN02472014 ABVX00000000.1 na 558269 180957 Pectobacterium brasiliense PBR1692 strain=PBR1692 na latest Contig Major Full 2008-09-09 ASM17313v1 University of Wisconsin GCA_000173135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/135/GCF_000173135.1_ASM17313v1/ na na na haploid bacteria 4918574 4918574 52.000000 0 1370 1370 NCBI RefSeq GCF_000173135.1-RS_2025_08_06 2025-08-06 4416 4218 79 18986251 GCF_000173175.1 PRJNA224116 SAMN02393765 ABWA00000000.1 na 512769 1313 Streptococcus pneumoniae BS458 strain=BS458 na latest Contig Major Full 2010-08-12 ASM17317v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/175/GCF_000173175.1_ASM17317v1/ na na na haploid bacteria 2063728 2063728 39.500000 0 109 109 NCBI RefSeq GCF_000173175.1-RS_2025_08_18 2025-08-18 2150 1942 36 na GCF_000173195.1 PRJNA224116 SAMN02393764 ABWB00000000.1 na 512768 1313 Streptococcus pneumoniae BS457 strain=BS457 na latest Contig Major Full 2010-08-12 ASM17319v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/195/GCF_000173195.1_ASM17319v1/ na na na haploid bacteria 2053197 2053197 39.500000 0 97 97 NCBI RefSeq GCF_000173195.1-RS_2026_02_16 2026-02-16 2124 1920 36 na GCF_000173215.1 PRJNA224116 SAMN02393766 ABWC00000000.1 na 512767 1313 Streptococcus pneumoniae BS397 strain=BS397 na latest Contig Major Full 2010-08-12 ASM17321v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/215/GCF_000173215.1_ASM17321v1/ na na na haploid bacteria 2070802 2070802 39.500000 0 22 22 NCBI RefSeq GCF_000173215.1-RS_2026_02_16 2026-02-16 2121 1896 39 na GCF_000173255.5 PRJNA224116 SAMN02469790 na na 486408 47715 Lacticaseibacillus rhamnosus HN001 strain=HN001 na latest Complete Genome Major Full 2024-12-10 ASM17325v3 Fonterra Research Centre GCA_000173255.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/255/GCF_000173255.5_ASM17325v3/ na na na haploid bacteria 2992972 2992972 47.000000 2 2 2 NCBI RefSeq GCF_000173255.5-RS_2024_12_22 2024-12-22 2805 2663 77 na GCF_000173275.1 PRJNA224116 SAMN02393762 ABWQ00000000.1 na 497962 1313 Streptococcus pneumoniae SP14-BS292 strain=SP14-BS292 na latest Contig Major Full 2010-08-12 ASM17327v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/275/GCF_000173275.1_ASM17327v1/ na na na haploid bacteria 2100368 2100368 39.500000 0 25 25 NCBI RefSeq GCF_000173275.1-RS_2026_02_16 2026-02-16 2164 1944 39 na GCF_000173295.1 PRJNA224116 SAMN02393763 ABWU00000000.1 na 497963 1313 Streptococcus pneumoniae SP-BS293 strain=SP-BS293 na latest Contig Major Full 2010-08-12 ASM17329v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/295/GCF_000173295.1_ASM17329v1/ na na na haploid bacteria 2065452 2065452 39.500000 0 30 30 NCBI RefSeq GCF_000173295.1-RS_2026_02_07 2026-02-07 2125 1891 40 na GCF_000173315.1 PRJNA224116 SAMN02393768 ABWV00000000.1 na 521005 727 Haemophilus influenzae 7P49H1 strain=7P49H1 na latest Contig Major Full 2009-05-08 ASM17331v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/315/GCF_000173315.1_ASM17331v1/ na na na haploid bacteria 1827667 1827667 38.000000 0 19 19 NCBI RefSeq GCF_000173315.1-RS_2026_04_27 2026-04-27 1807 1671 67 22970300 GCF_000173335.1 PRJNA224116 SAMN02393767 ABWW00000000.1 na 521004 727 Haemophilus influenzae 6P18H1 strain=6P18H1 na latest Contig Major Full 2009-05-08 ASM17333v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000173335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/335/GCF_000173335.1_ASM17333v1/ na na na haploid bacteria 1912236 1912236 38.000000 0 28 28 NCBI RefSeq GCF_000173335.1-RS_2026_04_29 2026-04-29 1956 1805 71 22970300 GCF_000173355.1 PRJNA224116 SAMN00008758 ABXA00000000.1 na 561177 33029 Anaerococcus hydrogenalis DSM 7454 strain=DSM 7454 na latest Contig Major Full 2008-10-01 ASM17335v1 Washington University Genome Sequencing Center GCA_000173355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/355/GCF_000173355.1_ASM17335v1/ na assembly from type material na haploid bacteria 1889366 1889366 29.500000 0 52 52 NCBI RefSeq GCF_000173355.1-RS_2026_04_23 2026-04-23 2011 1786 65 na GCF_000173375.1 PRJNA224116 SAMN02299421 ABXB00000000.3 na 561180 78342 Bifidobacterium gallicum DSM 20093 = LMG 11596 strain=DSM 20093 na latest Contig Major Full 2009-10-08 ASM17337v1 Washington University Genome Sequencing Center GCA_000173375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/375/GCF_000173375.1_ASM17337v1/ na assembly from type material na haploid bacteria 2019802 2019802 57.500000 0 27 27 NCBI RefSeq GCF_000173375.1-RS_2026_04_26 2026-04-26 1588 1489 65 na GCF_000173395.1 PRJNA224116 SAMN02471436 ABXK00000000.1 na 557601 470 Acinetobacter baumannii AB900 strain=AB900 na latest Contig Major Full 2008-12-05 ASM17339v1 Infectious Disease and Genomics Laboratory, Center of Excellence in Bioinformatics and Life Sciences, SUNY-Buffalo GCA_000173395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/395/GCF_000173395.1_ASM17339v1/ na na na haploid bacteria 3910877 3910877 39.000000 0 68 68 NCBI RefSeq GCF_000173395.1-RS_2026_01_13 2026-01-13 3763 3623 63 18931120 GCF_000173415.1 PRJNA224116 SAMN00008853 ABXW00000000.1 na 520999 126385 Providencia alcalifaciens DSM 30120 strain=DSM 30120 na latest Contig Major Full 2008-10-23 ASM17341v1 Washington University Genome Sequencing Center GCA_000173415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/415/GCF_000173415.1_ASM17341v1/ na assembly from type material na haploid bacteria 4029346 4029346 42.000000 0 79 79 NCBI RefSeq GCF_000173415.1-RS_2026_04_14 2026-04-14 3853 3733 58 na GCF_000173455.1 PRJNA224116 SAMN00008795 ABXY00000000.1 na 566552 1686 Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 strain=DSM 16992 na latest Contig Major Full 2008-10-23 ASM17345v1 Washington University Genome Sequencing Center GCA_000173455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/455/GCF_000173455.1_ASM17345v1/ na assembly from type material na haploid bacteria 2058429 2058429 56.000000 0 31 31 NCBI RefSeq GCF_000173455.1-RS_2026_05_16 2026-05-16 1778 1665 64 na GCF_000173475.1 PRJNA224116 SAMN02470780 ABYD00000000.1 na 564416 813 Chlamydia trachomatis 6276 na 6276 latest Complete Genome Major Full 2009-01-30 ASM17347v1 Oregon State University GCA_000173475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/475/GCF_000173475.1_ASM17347v1/ na na na haploid bacteria 1043181 1043181 41.500000 1 1 1 NCBI RefSeq GCF_000173475.1-RS_2025_08_25 2025-08-25 952 898 46 na GCF_000173495.1 PRJNA224116 SAMN02470781 ABYE00000000.1 na 564417 813 Chlamydia trachomatis 6276s na 6276s latest Complete Genome Major Full 2009-01-30 ASM17349v1 Oregon State University GCA_000173495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/495/GCF_000173495.1_ASM17349v1/ na na na haploid bacteria 1043182 1043182 41.500000 1 1 1 NCBI RefSeq GCF_000173495.1-RS_2025_08_25 2025-08-25 951 897 46 na GCF_000173515.1 PRJNA224116 SAMN02470778 ABYF00000000.1 na 564418 813 Chlamydia trachomatis 70 na 70 latest Complete Genome Major Full 2009-01-30 ASM17351v1 Oregon State University GCA_000173515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/515/GCF_000173515.1_ASM17351v1/ na na na haploid bacteria 1048006 1048006 41.500000 1 1 1 NCBI RefSeq GCF_000173515.1-RS_2025_08_25 2025-08-25 954 885 46 na GCF_000173535.1 PRJNA224116 SAMN02470779 ABYG00000000.1 na 564419 813 Chlamydia trachomatis 70s na 70s latest Complete Genome Major Full 2009-01-30 ASM17353v1 Oregon State University GCA_000173535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/535/GCF_000173535.1_ASM17353v1/ na na na haploid bacteria 1046064 1046064 41.500000 1 1 1 NCBI RefSeq GCF_000173535.1-RS_2025_08_25 2025-08-25 952 880 46 na GCF_000173555.1 PRJNA224116 SAMN02441783 ABYK00000000.1 na 513049 129910 Limnospira maxima CS-328 strain=CS-328 na latest Contig Major Full 2008-10-15 ASM17355v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000173555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/555/GCF_000173555.1_ASM17355v1/ na na na haploid bacteria 6003314 6003314 45.000000 0 129 129 NCBI RefSeq GCF_000173555.1-RS_2025_06_11 2025-06-11 5762 5207 45 21890670 GCF_000173595.1 PRJNA224116 SAMN02470536 ABZC00000000.1 na 570507 1313 Streptococcus pneumoniae CCRI 1974 strain=CCRI 1974 na latest Contig Major Full 2008-11-14 ASM17359v1 McGill University GCA_000173595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/595/GCF_000173595.1_ASM17359v1/ na na na haploid bacteria 2000683 2000683 39.500000 0 121 121 NCBI RefSeq GCF_000173595.1-RS_2026_03_20 2026-03-20 2080 1836 48 19351617 GCF_000173615.1 PRJNA224116 SAMN02436268 ABZS00000000.1 reference genome 432331 304736 Sulfurihydrogenibium yellowstonense SS-5 strain=SS-5 na latest Contig Major Full 2009-05-18 ASM17361v1 TIGR GCA_000173615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/615/GCF_000173615.1_ASM17361v1/ na assembly from type material na haploid bacteria 1534471 1534471 33.000000 0 228 228 NCBI RefSeq GCF_000173615.1-RS_2025_12_16 2025-12-16 1634 1489 49 19136599 GCF_000173655.1 PRJNA224116 SAMN00000714 ABZU00000000.1 na 553204 43765 Corynebacterium amycolatum SK46 strain=SK46 na latest Contig Major Full 2008-11-21 ASM17365v1 J. Craig Venter Institute GCA_000173655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/655/GCF_000173655.1_ASM17365v1/ na na na haploid bacteria 2513912 2513912 58.500000 0 48 48 NCBI RefSeq GCF_000173655.1-RS_2026_04_23 2026-04-23 2205 2125 54 na GCF_000173675.1 PRJNA224116 SAMN00000681 ABZV00000000.1 na 553177 1019 Capnocytophaga sputigena ATCC 33612 strain=Capno na latest Contig Major Full 2008-11-21 ASM17367v1 J. Craig Venter Institute GCA_000173675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/675/GCF_000173675.1_ASM17367v1/ na na na haploid bacteria 2997845 2997845 38.500000 0 65 65 NCBI RefSeq GCF_000173675.1-RS_2025_12_05 2025-12-05 2747 2661 44 na GCF_000173695.1 PRJNA224116 SAMN02415228 ACBF00000000.1 na 573395 28901 Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 strain=CDC07-0191 na latest Contig Major Full 2008-12-04 ASM17369v1 CDC/CCID/NCZVED/DFBMD/EDLB GCA_000173695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/695/GCF_000173695.1_ASM17369v1/ na na na haploid bacteria 4785739 4785739 52.000000 0 94 94 NCBI RefSeq GCF_000173695.1-RS_2025_08_15 2025-08-15 4702 4366 99 na GCF_000173715.1 PRJNA224116 SAMN00005357 ACCA00000000.1 na 527012 28152 Yersinia kristensenii ATCC 33638 strain=ATCC 33638 na latest Contig Major Full 2009-06-01 ASM17371v1 Naval Medical Research Center GCA_000173715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/715/GCF_000173715.1_ASM17371v1/ na assembly from type material na haploid bacteria 5042394 5042394 47.500000 0 153 153 NCBI RefSeq GCF_000173715.1-RS_2025_05_16 2025-05-16 4625 4293 84 na GCF_000173735.1 PRJNA224116 SAMN00005136 ACCB00000000.1 na 527002 29483 Yersinia aldovae ATCC 35236 strain=ATCC 35236 na latest Contig Major Full 2009-06-01 ASM17373v1 Naval Medical Research Center GCA_000173735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/735/GCF_000173735.1_ASM17373v1/ na assembly from type material na haploid bacteria 4304926 4304926 47.500000 0 210 210 NCBI RefSeq GCF_000173735.1-RS_2025_07_06 2025-07-06 3988 3622 83 na GCF_000173755.1 PRJNA224116 SAMN00005359 ACCC00000000.1 na 527005 29486 Yersinia ruckeri ATCC 29473 strain=ATCC 29473 na latest Contig Major Full 2009-06-01 ASM17375v1 Naval Medical Research Center GCA_000173755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/755/GCF_000173755.1_ASM17375v1/ na assembly from type material na haploid bacteria 3739990 3739990 47.500000 0 174 174 NCBI RefSeq GCF_000173755.1-RS_2025_05_16 2025-05-16 3439 3274 65 na GCF_000173775.1 PRJNA224116 SAMN00005360 ACCD00000000.1 na 527004 29485 Yersinia rohdei ATCC 43380 strain=ATCC 43380 na latest Contig Major Full 2009-06-01 ASM17377v1 Naval Medical Research Center GCA_000173775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/775/GCF_000173775.1_ASM17377v1/ na assembly from type material na haploid bacteria 4317478 4317478 47.000000 0 141 141 NCBI RefSeq GCF_000173775.1-RS_2025_05_16 2025-05-16 3896 3732 72 na GCF_000173815.1 PRJNA224116 SAMN00000025 ACCL00000000.2 na 478749 168384 Marvinbryantia formatexigens DSM 14469 strain=DSM 14469 na latest Contig Major Full 2009-06-22 ASM17381v1 Washington University Genome Sequencing Center GCA_000173815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/815/GCF_000173815.1_ASM17381v1/ na assembly from type material na haploid bacteria 4548960 4548960 49.500000 0 58 58 NCBI RefSeq GCF_000173815.1-RS_2026_02_27 2026-02-27 4313 4164 71 na GCF_000173875.1 PRJNA224116 SAMN00008841 ACDX00000000.2 na 546266 488 Neisseria mucosa ATCC 25996 strain=ATCC 25996 na latest Contig Major Full 2009-09-04 ASM17387v1 Washington University Genome Sequencing Center GCA_000173875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/875/GCF_000173875.1_ASM17387v1/ na na na haploid bacteria 2578748 2578748 51.000000 0 67 67 NCBI RefSeq GCF_000173875.1-RS_2026_02_16 2026-02-16 2503 2305 66 na GCF_000173895.1 PRJNA224116 SAMN00008837 ACDY00000000.2 na 546262 483 Neisseria cinerea ATCC 14685 strain=ATCC 14685 na latest Contig Major Full 2009-09-24 ASM17389v1 Washington University Genome Sequencing Center GCA_000173895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/895/GCF_000173895.1_ASM17389v1/ na assembly from type material na haploid bacteria 1872773 1872773 51.000000 0 35 35 NCBI RefSeq GCF_000173895.1-RS_2026_04_23 2026-04-23 1848 1716 67 na GCF_000173915.1 PRJNA224116 SAMN00000721 ACDZ00000000.2 na 546270 1379 Gemella haemolysans ATCC 10379 strain=ATCC 10379 na latest Contig Major Full 2009-06-23 ASM17391v1 Human Microbiome Project GCA_000173915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/915/GCF_000173915.1_ASM17391v1/ na assembly from type material na haploid bacteria 1916192 1916192 31.000000 0 15 15 NCBI RefSeq GCF_000173915.1-RS_2026_05_16 2026-05-16 1771 1686 64 na GCF_000173935.1 PRJNA224116 SAMN00008839 ACEN00000000.1 na 546264 484 Neisseria flavescens NRL30031/H210 strain=NRL30031/H210 na latest Contig Major Full 2009-02-03 ASM17393v1 Washington University Genome Sequencing Center GCA_000173935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/935/GCF_000173935.1_ASM17393v1/ na na na haploid bacteria 2205588 2205588 49.000000 0 117 117 NCBI RefSeq GCF_000173935.1-RS_2026_02_16 2026-02-16 2229 2039 64 na GCF_000173955.1 PRJNA224116 SAMN00008843 ACEO00000000.2 na 546268 28449 Neisseria subflava NJ9703 strain=NJ9703 na latest Contig Major Full 2009-10-05 ASM17395v1 Washington University Genome Sequencing Center GCA_000173955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/955/GCF_000173955.1_ASM17395v1/ na na na haploid bacteria 2292986 2292986 49.000000 0 63 63 NCBI RefSeq GCF_000173955.1-RS_2025_06_15 2025-06-15 2255 2102 62 na GCF_000173975.1 PRJNA224116 SAMN02415618 ACEP00000000.1 na 411469 39488 Anaerobutyricum hallii DSM 3353 strain=DSM 3353 na latest Contig Major Full 2009-02-03 ASM17397v1 Washington University Genome Sequencing Center GCA_000173975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/173/975/GCF_000173975.1_ASM17397v1/ na assembly from type material na haploid bacteria 3290996 3290996 38.000000 0 175 175 NCBI RefSeq GCF_000173975.1-RS_2026_02_27 2026-02-27 3043 2877 70 na GCF_000174015.1 PRJNA224116 SAMN00000717 ACFE00000000.1 reference genome 553184 1383 Lancefieldella rimae ATCC 49626 strain=ATCC 49626 na latest Contig Major Full 2009-01-22 ASM17401v1 J. Craig Venter Institute GCA_000174015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/015/GCF_000174015.1_ASM17401v1/ na assembly from type material na haploid bacteria 1626291 1626291 49.500000 0 9 9 NCBI RefSeq GCF_000174015.1-RS_2026_04_20 2026-04-20 1538 1478 51 na GCF_000174035.1 PRJNA224116 SAMN02470543 ACFI00000000.1 na 553481 1764 Mycobacterium avium subsp. avium ATCC 25291 strain=ATCC 25291 na latest Contig Major Full 2009-01-27 ASM17403v1 McGill University GCA_000174035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/035/GCF_000174035.1_ASM17403v1/ na assembly from type material na haploid bacteria 4857995 4857995 69.000000 0 258 258 NCBI RefSeq GCF_000174035.1-RS_2026_05_18 2026-05-18 4744 4429 53 na GCF_000174055.1 PRJNA224116 SAMN02470775 ACFJ00000000.1 na 573237 813 Chlamydia trachomatis D(s)2923 na 2923 latest Complete Genome Major Full 2009-01-30 ASM17405v1 Oregon State University GCA_000174055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/055/GCF_000174055.1_ASM17405v1/ na na na haploid bacteria 1042757 1042757 41.500000 1 1 1 NCBI RefSeq GCF_000174055.1-RS_2025_08_25 2025-08-25 952 891 46 na GCF_000174075.1 PRJNA224116 SAMN02470818 ACFK00000000.1 na 593275 9 Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum) strain=LSR1 (Acyrthosiphon pisum) na latest Complete Genome Major Full 2009-03-02 ASM17407v1 International Aphid Genomics Consortium GCA_000174075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/075/GCF_000174075.1_ASM17407v1/ na na na haploid bacteria 642011 642011 26.500000 1 1 1 NCBI RefSeq GCF_000174075.1-RS_2025_08_25 2025-08-25 616 568 37 na GCF_000174095.1 PRJNA224116 SAMN02472032 ACFP00000000.1 na 77037 77037 Wolbachia endosymbiont of Muscidifurax uniraptor na wUni latest Scaffold Major Full 2009-03-24 wUni_1.0 Uppsala University GCA_000174095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/095/GCF_000174095.1_wUni_1.0/ na na na haploid bacteria 867873 866516 35.000000 0 256 284 NCBI RefSeq GCF_000174095.1-RS_2026_01_08 2026-01-08 1011 827 29 19307581 GCF_000174115.1 PRJNA224116 SAMN02393812 ACFQ00000000.1 na 592313 666 Vibrio cholerae 12129(1) strain=12129(1) na latest Contig Major Full 2009-05-01 ASM17411v1 Los Alamos National Laboratory, National Microbial Pathogen Data Resource (NMPDR) GCA_000174115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/115/GCF_000174115.1_ASM17411v1/ na na na haploid bacteria 3969506 3969506 47.500000 0 12 12 NCBI RefSeq GCF_000174115.1-RS_2026_02_16 2026-02-16 3664 3446 115 na GCF_000174135.1 PRJNA224116 SAMN00000713 ACFR00000000.1 na 553212 29388 Staphylococcus capitis SK14 strain=SK14 na latest Contig Major Full 2009-02-03 ASM17413v1 J. Craig Venter Institute GCA_000174135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/135/GCF_000174135.1_ASM17413v1/ na na na haploid bacteria 2435835 2435835 33.000000 0 32 32 NCBI RefSeq GCF_000174135.1-RS_2026_02_06 2026-02-06 2402 2289 66 na GCF_000174155.1 PRJNA224116 SAMN02470283 ACFT00000000.1 na 591023 51047 Actinobacillus minor 202 strain=202 na latest Contig Major Full 2009-02-09 ASM17415v1 McGill University GCA_000174155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/155/GCF_000174155.1_ASM17415v1/ na na na haploid bacteria 2127148 2127148 39.500000 0 154 154 NCBI RefSeq GCF_000174155.1-RS_2025_04_15 2025-04-15 2067 1986 34 19819087 GCF_000174175.1 PRJNA224116 SAMN00000716 ACFU00000000.1 na 553218 203 Campylobacter rectus RM3267 strain=RM3267 na latest Contig Major Full 2009-02-06 ASM17417v1 J. Craig Venter Institute GCA_000174175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/175/GCF_000174175.1_ASM17417v1/ na na na haploid bacteria 2513107 2513107 45.000000 0 89 89 NCBI RefSeq GCF_000174175.1-RS_2026_02_16 2026-02-16 2513 2370 46 na GCF_000174195.1 PRJNA224116 SAMN00008857 ACFY00000000.1 na 622312 360807 Roseburia inulinivorans DSM 16841 strain=DSM 16841 na latest Contig Major Full 2009-03-12 ASM17419v1 Washington University Genome Sequencing Center GCA_000174195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/195/GCF_000174195.1_ASM17419v1/ na assembly from type material na haploid bacteria 4048462 4048462 42.000000 0 179 179 NCBI RefSeq GCF_000174195.1-RS_2025_08_05 2025-08-05 4068 3797 65 na GCF_000174235.1 PRJNA224116 SAMN02393807 ACHV00000000.1 na 593585 666 Vibrio cholerae VL426 strain=VL426 na latest Contig Major Full 2009-05-01 ASM17423v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000174235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/235/GCF_000174235.1_ASM17423v1/ na na na haploid bacteria 3987383 3987383 47.500000 0 5 5 NCBI RefSeq GCF_000174235.1-RS_2026_02_16 2026-02-16 3584 3325 125 na GCF_000174255.1 PRJNA224116 SAMN02393813 ACHW00000000.1 na 593586 666 Vibrio cholerae TM 11079-80 strain=TM 11079-80 na latest Contig Major Full 2009-05-01 ASM17425v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000174255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/255/GCF_000174255.1_ASM17425v1/ na na na haploid bacteria 4055140 4055140 47.500000 0 35 35 NCBI RefSeq GCF_000174255.1-RS_2026_02_16 2026-02-16 3740 3493 111 na GCF_000174275.1 PRJNA224116 SAMN02393809 ACHX00000000.1 na 593589 666 Vibrio cholerae RC9 strain=RC9 na latest Contig Major Full 2009-05-01 ASM17427v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000174275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/275/GCF_000174275.1_ASM17427v1/ na na na haploid bacteria 4211011 4211011 47.500000 0 11 11 NCBI RefSeq GCF_000174275.1-RS_2026_02_15 2026-02-15 3947 3767 121 na GCF_000174295.1 PRJNA224116 SAMN02393808 ACHY00000000.1 na 593590 666 Vibrio cholerae TMA 21 strain=TMA 21 na latest Contig Major Full 2009-05-01 ASM17429v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000174295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/295/GCF_000174295.1_ASM17429v1/ na na na haploid bacteria 4023772 4023772 47.500000 0 20 20 NCBI RefSeq GCF_000174295.1-RS_2026_02_16 2026-02-16 3706 3513 119 na GCF_000174315.1 PRJNA224116 SAMN02393810 ACHZ00000000.1 na 417400 666 Vibrio cholerae B33 strain=B33 na latest Scaffold Major Full 2009-05-01 ASM17431v1 Los Alamos National Laboratory, National Microbial Pathogen Data Resource (NMPDR) GCA_000174315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/315/GCF_000174315.1_ASM17431v1/ na na na haploid bacteria 4154698 4154656 47.500000 0 17 19 NCBI RefSeq GCF_000174315.1-RS_2026_03_20 2026-03-20 3843 3669 119 19850044 GCF_000174335.1 PRJNA224116 SAMN02393811 ACIA00000000.1 na 593587 666 Vibrio cholerae BX 330286 strain=BX 330286 na latest Contig Major Full 2009-05-01 ASM17433v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000174335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/335/GCF_000174335.1_ASM17433v1/ na na na haploid bacteria 4000672 4000672 47.500000 0 8 8 NCBI RefSeq GCF_000174335.1-RS_2026_01_10 2026-01-10 3701 3529 115 na GCF_000174355.1 PRJNA224116 SAMN00001906 ACIS00000000.1 reference genome 279714 549169 Pseudogulbenkiania ferrooxidans 2002 strain=2002 na latest Scaffold Major Full 2009-03-06 ASM17435v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000174355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/355/GCF_000174355.1_ASM17435v1/ na na na haploid bacteria 4228787 4228746 64.500000 0 20 23 NCBI RefSeq GCF_000174355.1-RS_2025_12_11 2025-12-11 4052 3913 98 na GCF_000174395.2 PRJNA224116 SAMN00002237 na na 333849 1352 Enterococcus faecium DO strain=DO na latest Complete Genome Major Full 2012-05-25 ASM17439v2 Baylor College of Medicine GCA_000174395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/395/GCF_000174395.2_ASM17439v2/ na na na haploid bacteria 3052572 3052572 38.000000 4 4 4 NCBI RefSeq GCF_000174395.2-RS_2026_03_20 2026-03-20 3028 2780 86 22769602 GCF_000174415.1 PRJNA224116 SAMN02441789 ACJM00000000.1 reference genome 555088 427926 Dethiobacter alkaliphilus AHT 1 strain=AHT 1 na latest Contig Major Full 2009-03-17 ASM17441v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000174415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/415/GCF_000174415.1_ASM17441v1/ na assembly from type material na haploid bacteria 3116746 3116746 48.500000 0 34 34 NCBI RefSeq GCF_000174415.1-RS_2025_11_29 2025-11-29 3217 3126 64 na GCF_000174435.1 PRJNA224116 SAMN02441800 ACJN00000000.2 reference genome 555779 488939 Desulfonatronospira thiodismutans ASO3-1 strain=ASO3-1 na latest Scaffold Major Full 2010-06-17 ASM17443v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000174435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/435/GCF_000174435.1_ASM17443v1/ na assembly from type material na haploid bacteria 4107394 4107346 51.500000 0 5 7 NCBI RefSeq GCF_000174435.1-RS_2026_07_03 2026-07-03 3877 3771 59 na GCF_000174455.1 PRJNA224116 SAMN02595317 ACKC00000000.1 na 553565 1280 Staphylococcus aureus A5937 strain=A5937 na latest Contig Major Full 2009-09-11 ASM17445v1 Broad Institute GCA_000174455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/455/GCF_000174455.1_ASM17445v1/ na na na haploid bacteria 2827272 2827272 33.000000 0 32 32 NCBI RefSeq GCF_000174455.1-RS_2025_04_15 2025-04-15 2862 2726 64 22492855 GCF_000174475.1 PRJNA224116 SAMN02595318 ACKD00000000.1 na 553567 1280 Staphylococcus aureus A5948 strain=A5948 na latest Contig Major Full 2009-09-11 ASM17447v1 Broad Institute GCA_000174475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/475/GCF_000174475.1_ASM17447v1/ na na na haploid bacteria 2846107 2846107 32.500000 0 65 65 NCBI RefSeq GCF_000174475.1-RS_2025_08_25 2025-08-25 2874 2733 64 na GCF_000174495.1 PRJNA224116 SAMN02595319 ACKE00000000.1 na 553568 1280 Staphylococcus aureus A6224 strain=A6224 na latest Contig Major Full 2009-09-11 ASM17449v1 Broad Institute GCA_000174495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/495/GCF_000174495.1_ASM17449v1/ na na na haploid bacteria 2870228 2870228 33.000000 0 49 49 NCBI RefSeq GCF_000174495.1-RS_2025_04_15 2025-04-15 2933 2778 65 22492855 GCF_000174515.1 PRJNA224116 SAMN02595320 ACKF00000000.1 na 553571 1280 Staphylococcus aureus A6300 strain=A6300 na latest Contig Major Full 2009-09-11 ASM17451v1 Broad Institute GCA_000174515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/515/GCF_000174515.1_ASM17451v1/ na na na haploid bacteria 2816649 2816649 33.000000 0 49 49 NCBI RefSeq GCF_000174515.1-RS_2025_04_15 2025-04-15 2835 2698 64 22492855 GCF_000174535.1 PRJNA224116 SAMN02595321 ACKG00000000.1 na 553573 1280 Staphylococcus aureus A8115 strain=A8115 na latest Contig Major Full 2009-09-11 ASM17453v1 Broad Institute GCA_000174535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/535/GCF_000174535.1_ASM17453v1/ na na na haploid bacteria 2746960 2746960 32.500000 0 38 38 NCBI RefSeq GCF_000174535.1-RS_2025_08_25 2025-08-25 2771 2637 64 na GCF_000174555.1 PRJNA224116 SAMN02595322 ACKH00000000.1 na 553581 1280 Staphylococcus aureus A9299 strain=A9299 na latest Contig Major Full 2009-09-11 ASM17455v1 Broad Institute GCA_000174555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/555/GCF_000174555.1_ASM17455v1/ na na na haploid bacteria 2782181 2782181 33.000000 0 48 48 NCBI RefSeq GCF_000174555.1-RS_2025_08_25 2025-08-25 2818 2691 65 na GCF_000174575.1 PRJNA224116 SAMN02595323 ACKI00000000.1 na 553583 1280 Staphylococcus aureus A9635 strain=A9635 na latest Contig Major Full 2009-09-11 ASM17457v1 Broad Institute GCA_000174575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/575/GCF_000174575.1_ASM17457v1/ na na na haploid bacteria 2731263 2731263 33.000000 0 40 40 NCBI RefSeq GCF_000174575.1-RS_2025_04_15 2025-04-15 2748 2597 64 22492855 GCF_000174595.1 PRJNA224116 SAMN02595324 ACKJ00000000.1 na 553588 1280 Staphylococcus aureus A9719 strain=A9719 na latest Contig Major Full 2009-09-11 ASM17459v1 Broad Institute GCA_000174595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/595/GCF_000174595.1_ASM17459v1/ na na na haploid bacteria 2856961 2856961 33.000000 0 60 60 NCBI RefSeq GCF_000174595.1-RS_2025_08_25 2025-08-25 2902 2759 65 na GCF_000174615.1 PRJNA224116 SAMN02595325 ACKK00000000.1 na 553592 1280 Staphylococcus aureus A9763 strain=A9763 na latest Contig Major Full 2009-09-11 ASM17461v1 Broad Institute GCA_000174615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/615/GCF_000174615.1_ASM17461v1/ na na na haploid bacteria 2769858 2769858 32.500000 0 41 41 NCBI RefSeq GCF_000174615.1-RS_2025_08_25 2025-08-25 2785 2646 63 na GCF_000174635.1 PRJNA224116 SAMN02595326 ACKL00000000.1 na 553596 1280 Staphylococcus aureus A9781 strain=A9781 na latest Contig Major Full 2009-08-21 ASM17463v1 Broad Institute GCA_000174635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/635/GCF_000174635.1_ASM17463v1/ na na na haploid bacteria 2822169 2822169 32.500000 0 50 50 NCBI RefSeq GCF_000174635.1-RS_2025_08_25 2025-08-25 2873 2720 64 na GCF_000174655.1 PRJNA224116 SAMN00008842 ACKO00000000.2 na 547045 490 Neisseria sicca ATCC 29256 strain=ATCC 29256 na latest Contig Major Full 2009-05-08 ASM17465v1 Washington University Genome Sequencing Center GCA_000174655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/655/GCF_000174655.1_ASM17465v1/ na assembly from type material na haploid bacteria 2830772 2830772 51.000000 0 61 61 NCBI RefSeq GCF_000174655.1-RS_2026_04_02 2026-04-02 2754 2544 60 na GCF_000174695.1 PRJNA224116 SAMN00138950 ACLH00000000.1 na 548476 169292 Corynebacterium aurimucosum ATCC 700975 strain=ATCC 700975 na latest Contig Major Full 2009-04-27 ASM17469v1 Baylor College of Medecine GCA_000174695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/695/GCF_000174695.1_ASM17469v1/ na assembly from heterotypic synonym type material na haploid bacteria 2730325 2730325 60.500000 0 101 101 NCBI RefSeq GCF_000174695.1-RS_2026_05_16 2026-05-16 2636 2524 61 na GCF_000174715.1 PRJNA224116 SAMN00002153 ACLO00000000.1 na 596322 1304 Streptococcus salivarius SK126 strain=SK126 na latest Contig Major Full 2009-04-29 ASM17471v1 J. Craig Venter Institute GCA_000174715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/715/GCF_000174715.1_ASM17471v1/ na na na haploid bacteria 2128332 2128332 40.000000 0 101 101 NCBI RefSeq GCF_000174715.1-RS_2026_02_16 2026-02-16 1968 1889 44 na GCF_000174735.1 PRJNA224116 SAMN00001902 ACLP00000000.1 na 629742 1290 Staphylococcus hominis SK119 strain=SK119 na latest Contig Major Full 2009-04-29 ASM17473v1 J. Craig Venter Institute GCA_000174735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/735/GCF_000174735.1_ASM17473v1/ na na na haploid bacteria 2226236 2226236 31.500000 0 37 37 NCBI RefSeq GCF_000174735.1-RS_2026_02_06 2026-02-06 2241 2125 63 na GCF_000174755.1 PRJNA224116 SAMN00001917 ACLQ00000000.1 na 553178 1017 Capnocytophaga gingivalis ATCC 33624 strain=ATCC 33624 na latest Contig Major Full 2009-04-29 ASM17475v1 J. Craig Venter Institute GCA_000174755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/755/GCF_000174755.1_ASM17475v1/ na assembly from type material na haploid bacteria 2667138 2667138 40.500000 0 37 37 NCBI RefSeq GCF_000174755.1-RS_2026_05_16 2026-05-16 2523 2418 59 na GCF_000174775.1 PRJNA224116 SAMN00002220 ACLR00000000.1 na 596327 281920 Porphyromonas uenonis 60-3 strain=60-3 na latest Contig Major Full 2009-04-29 ASM17477v1 J. Craig Venter Institute GCA_000174775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/775/GCF_000174775.1_ASM17477v1/ na na na haploid bacteria 2242885 2242885 52.500000 0 250 250 NCBI RefSeq GCF_000174775.1-RS_2025_01_08 2025-01-08 1983 1827 54 na GCF_000174795.2 PRJNA224116 SAMN00713574 na na 550542 550542 Geobacillus sp. Y412MC52 strain=Y412MC52 na latest Complete Genome Major Full 2011-01-07 ASM17479v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000174795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/795/GCF_000174795.2_ASM17479v2/ na na na haploid bacteria 3673940 3673940 52.500000 2 2 2 NCBI RefSeq GCF_000174795.2-RS_2025_04_07 2025-04-07 3712 3467 118 26819654 GCF_000174815.1 PRJNA224116 SAMN00002247 ACNN00000000.1 na 553175 28124 Porphyromonas endodontalis ATCC 35406 strain=ATCC 35406 na latest Contig Major Full 2009-05-01 ASM17481v1 J. Craig Venter Institute GCA_000174815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/815/GCF_000174815.1_ASM17481v1/ na assembly from type material na haploid bacteria 2064508 2064508 47.500000 0 37 37 NCBI RefSeq GCF_000174815.1-RS_2026_03_31 2026-03-31 1768 1678 51 na GCF_000174855.1 PRJNA224116 SAMN02470769 ACNU00000000.1 na 637987 1313 Streptococcus pneumoniae str. Canada MDR_19A strain=Canada MDR_19A na latest Contig Major Full 2009-12-10 ASM17485v1 Ontario Agency for Health Protection and Promotion GCA_000174855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/855/GCF_000174855.1_ASM17485v1/ na na na haploid bacteria 2029134 2029134 40.000000 0 127 127 NCBI RefSeq GCF_000174855.1-RS_2026_02_01 2026-02-01 2130 1885 47 20042094 GCF_000174875.1 PRJNA224116 SAMN02470768 ACNV00000000.1 na 637988 1313 Streptococcus pneumoniae str. Canada MDR_19F strain=Canada MDR_19F na latest Contig Major Full 2009-12-10 ASM17487v1 Ontario Agency for Health Protection and Promotion GCA_000174875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/875/GCF_000174875.1_ASM17487v1/ na na na haploid bacteria 1986627 1986627 39.500000 0 277 277 NCBI RefSeq GCF_000174875.1-RS_2026_02_01 2026-02-01 2058 1884 32 20042094 GCF_000174935.1 PRJNA224116 SAMN02471489 ACOS00000000.1 na 645663 1352 Enterococcus faecium E1039 strain=E1039 na latest Contig Major Full 2010-03-26 ASM17493v1 Dept. of Medical Microbiology, University Medical Center Utrecht GCA_000174935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/935/GCF_000174935.1_ASM17493v1/ na na na haploid bacteria 2503230 2503230 38.000000 0 124 124 NCBI RefSeq GCF_000174935.1-RS_2024_09_04 2024-09-04 2530 2322 62 20398277 GCF_000174955.1 PRJNA224116 SAMN02471370 ACOT00000000.1 na 644279 1280 Staphylococcus aureus subsp. aureus 132 strain=132 na latest Contig Major Full 2009-07-16 ASM17495v1 Universidad Pública de Navarra GCA_000174955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/955/GCF_000174955.1_ASM17495v1/ na na na haploid bacteria 2825358 2825358 32.500000 0 46 46 NCBI RefSeq GCF_000174955.1-RS_2025_04_15 2025-04-15 2881 2744 58 19581398 GCF_000175015.1 PRJNA224116 SAMN00000720 ACOX00000000.2 na 553209 1351 Enterococcus faecalis TUSoD Ef11 strain=TUSoD Ef11 na latest Contig Major Full 2010-07-19 ASM17501v1 J. Craig Venter Institute GCA_000175015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/015/GCF_000175015.1_ASM17501v1/ na na na haploid bacteria 2836650 2836650 37.500000 0 11 11 NCBI RefSeq GCF_000175015.1-RS_2026_01_10 2026-01-10 2763 2623 77 na GCF_000175035.1 PRJNA224116 SAMN00001905 ACOY00000000.1 na 596325 109790 Lactobacillus jensenii 269-3 strain=269-3 na latest Contig Major Full 2009-06-03 ASM17503v1 J. Craig Venter Institute GCA_000175035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/035/GCF_000175035.1_ASM17503v1/ na na na haploid bacteria 1688275 1688275 34.500000 0 57 57 NCBI RefSeq GCF_000175035.1-RS_2026_02_16 2026-02-16 1616 1526 55 na GCF_000175055.1 PRJNA224116 SAMN00002206 ACOZ00000000.1 na 630527 1596 Lactobacillus gasseri 202-4 strain=202-4 na latest Contig Major Full 2009-06-03 ASM17505v1 J. Craig Venter Institute GCA_000175055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/055/GCF_000175055.1_ASM17505v1/ na na na haploid bacteria 1820250 1820250 35.000000 0 70 70 NCBI RefSeq GCF_000175055.1-RS_2026_02_16 2026-02-16 1807 1685 55 na GCF_000175075.1 PRJNA224116 SAMN02469607 ACPC00000000.1 na 406124 406124 Bacillus sp. m3-13 strain=m3-13 na latest Contig Major Full 2010-04-30 ASM17507v1 Cinvestav del IPN GCA_000175075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/075/GCF_000175075.1_ASM17507v1/ na na na haploid bacteria 4137575 4137575 40.500000 0 50 50 NCBI RefSeq GCF_000175075.1-RS_2025_08_24 2025-08-24 4321 4046 90 20504335 GCF_000175135.1 PRJNA224116 SAMN02472095 ACPX00000000.1 na 427081 346 Xanthomonas citri pv. aurantifolii str. ICPB 11122 strain=ICPB 11122 na latest Scaffold Major Full 2010-03-30 ASM17513v1 Sao Paulo State (Brazil) Consortium GCA_000175135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/135/GCF_000175135.1_ASM17513v1/ na na na haploid bacteria 4879662 4879493 65.000000 0 237 244 NCBI RefSeq GCF_000175135.1-RS_2026_05_18 2026-05-18 4319 3910 98 20388224 GCF_000175155.1 PRJNA224116 SAMN02472096 ACPY00000000.1 na 427082 346 Xanthomonas citri pv. aurantifolii str. ICPB 10535 strain=ICPB 10535 na latest Scaffold Major Full 2010-03-30 ASM17515v1 Sao Paulo State (Brazil) Xanthomonas Consortium GCA_000175155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/155/GCF_000175155.1_ASM17515v1/ na na na haploid bacteria 5012633 5012623 65.000000 0 351 352 NCBI RefSeq GCF_000175155.1-RS_2026_05_18 2026-05-18 4497 4073 100 20388224 GCF_000175175.1 PRJNA224116 SAMN00002361 ACPZ00000000.1 na 596319 1292 Staphylococcus warneri L37603 strain=L37603 na latest Contig Major Full 2009-06-09 ASM17517v1 J. Craig Venter Institute GCA_000175175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/175/GCF_000175175.1_ASM17517v1/ na na na haploid bacteria 2425653 2425653 33.000000 0 77 77 NCBI RefSeq GCF_000175175.1-RS_2025_08_14 2025-08-14 2406 2272 64 na GCF_000175195.1 PRJNA224116 SAMN02470284 ACQL00000000.1 reference genome 637911 51047 Actinobacillus minor NM305 strain=NM305 na latest Contig Major Full 2009-06-19 ASM17519v1 McGill University GCA_000175195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/195/GCF_000175195.1_ASM17519v1/ na assembly from type material na haploid bacteria 2425264 2425264 39.500000 0 197 197 NCBI RefSeq GCF_000175195.1-RS_2026_03_20 2026-03-20 2395 2288 56 19819087 GCF_000175215.2 PRJNA224116 SAMN00002561 na reference genome 573065 78587 Asticcacaulis excentricus CB 48 strain=CS 48 na latest Complete Genome Major Full 2010-12-22 ASM17521v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000175215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/215/GCF_000175215.2_ASM17521v2/ na assembly from type material na haploid bacteria 4308776 4308776 59.500000 4 4 4 NCBI RefSeq GCF_000175215.2-RS_2026_05_01 2026-05-01 3878 3791 62 na GCF_000175235.1 PRJNA224116 SAMN02441799 ACQT00000000.1 na 573060 47920 Acidovorax delafieldii 2AN strain=2AN na latest Contig Major Full 2009-06-22 ASM17523v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000175235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/235/GCF_000175235.1_ASM17523v1/ na na na haploid bacteria 4842094 4842094 65.000000 0 638 638 NCBI RefSeq GCF_000175235.1-RS_2025_08_25 2025-08-25 4833 4468 58 na GCF_000175255.2 PRJNA224116 SAMN02232066 na na 555217 542 Zymomonas mobilis subsp. mobilis ATCC 10988 strain=ATCC 10988 na latest Complete Genome Major Full 2011-06-13 ASM17525v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000175255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/255/GCF_000175255.2_ASM17525v2/ na assembly from type material na haploid bacteria 2143461 2143461 46.000000 7 7 7 NCBI RefSeq GCF_000175255.2-RS_2026_05_14 2026-05-14 1913 1820 57 21725006 GCF_000175295.2 PRJNA224116 SAMN00713580 na reference genome 509193 29323 Thermoanaerobacter brockii subsp. finnii Ako-1 strain=Ako-1 na latest Complete Genome Major Full 2011-01-24 ASM17529v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000175295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/295/GCF_000175295.2_ASM17529v2/ na assembly from type material na haploid bacteria 2344824 2344824 34.500000 1 1 1 NCBI RefSeq GCF_000175295.2-RS_2026_04_23 2026-04-23 2395 2246 73 na GCF_000175315.3 PRJNA224116 SAMN02463750 ACRE00000000.2 na 562973 1656 Actinomyces viscosus C505 strain=C505 na latest Scaffold Major Full 2013-09-30 Acti_vis_C505_V3 Broad Institute GCA_000175315.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/315/GCF_000175315.3_Acti_vis_C505_V3/ na na na haploid bacteria 3134496 3126396 68.500000 0 5 86 NCBI RefSeq GCF_000175315.3-RS_2026_03_17 2026-03-17 2691 2554 64 na GCF_000175335.1 PRJNA224116 SAMN02470262 ACSC00000000.1 na 536233 1491 Clostridium botulinum E1 str. 'BoNT E Beluga' strain=BoNT E Beluga na latest Contig Major Full 2009-07-01 ASM17533v1 Los Alamos National Laboratory GCA_000175335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/335/GCF_000175335.1_ASM17533v1/ na na na haploid bacteria 3999201 3999201 27.500000 0 6 6 NCBI RefSeq GCF_000175335.1-RS_2025_06_06 2025-06-06 3818 3648 124 na GCF_000175355.1 PRJNA224116 SAMN02471125 ACSE00000000.1 na 655225 1247 Oenococcus oeni AWRIB429 strain=AWRIB429 na latest Contig Major Full 2010-03-03 ASM17535v1 The Australian Wine Research Institute (AWRI) GCA_000175355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/355/GCF_000175355.1_ASM17535v1/ na na na haploid bacteria 1927702 1927702 38.000000 0 58 58 NCBI RefSeq GCF_000175355.1-RS_2026_04_01 2026-04-01 2058 1929 49 20111862 GCF_000175375.1 PRJNA224116 SAMN00001942 ACSH00000000.2 reference genome 553207 43768 Corynebacterium matruchotii ATCC 14266 strain=ATCC 14266 na latest Contig Major Full 2010-09-01 ASM17537v1 J. Craig Venter Institute GCA_000175375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/375/GCF_000175375.1_ASM17537v1/ na assembly from type material na haploid bacteria 2855988 2855988 57.000000 0 8 8 NCBI RefSeq GCF_000175375.1-RS_2026_03_31 2026-03-31 2585 2492 65 na GCF_000175395.3 PRJNA224116 SAMN02470277 ACSJ00000000.1 na 592027 1491 Clostridium botulinum D str. 1873 strain=1873 na latest Contig Major Full 2009-07-10 ASM17539v3 Los Alamos National Laboratory GCA_000175395.3 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/395/GCF_000175395.3_ASM17539v3/ na na na haploid bacteria 2399201 2399201 28.000000 2 13 13 NCBI RefSeq GCF_000175395.3-RS_2026_03_08 2026-03-08 2346 2190 133 na GCF_000175415.3 PRJNA224116 SAMN02344446 ACSK00000000.3 na 634502 118562 Limnospira platensis str. Paraca strain=Paraca UASWS latest Contig Major Full 2014-06-06 ASM17541v3 University of Applied Sciences of Western Switzerland GCA_000175415.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/415/GCF_000175415.3_ASM17541v3/ na na na haploid bacteria 6501886 6501886 44.500000 0 268 268 NCBI RefSeq GCF_000175415.3-RS_2025_07_31 2025-07-31 6572 6084 50 25103760 GCF_000175435.1 PRJNA224116 SAMN02595334 ACSL00000000.1 na 656913 727 Haemophilus influenzae NT127 strain=NT127 na latest Contig Major Full 2009-09-29 ASM17543v1 Broad Institute GCA_000175435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/435/GCF_000175435.1_ASM17543v1/ na na na haploid bacteria 1865669 1865669 38.000000 0 41 41 NCBI RefSeq GCF_000175435.1-RS_2026_02_16 2026-02-16 1890 1757 66 na GCF_000175455.1 PRJNA224116 SAMN02595335 ACSM00000000.1 na 656912 727 Haemophilus influenzae RdAW strain=RdAW na latest Contig Major Full 2009-09-29 ASM17545v1 Broad Institute GCA_000175455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/455/GCF_000175455.1_ASM17545v1/ na na na haploid bacteria 1802170 1802170 38.000000 0 32 32 NCBI RefSeq GCF_000175455.1-RS_2026_02_16 2026-02-16 1803 1673 66 na GCF_000175475.1 PRJNA224116 SAMN02595336 ACSN00000000.1 na 553594 1280 Staphylococcus aureus A9765 strain=A9765 na latest Contig Major Full 2009-12-30 ASM17547v1 Broad Institute GCA_000175475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/475/GCF_000175475.1_ASM17547v1/ na na na haploid bacteria 2887954 2887954 32.500000 0 86 86 NCBI RefSeq GCF_000175475.1-RS_2025_08_25 2025-08-25 2964 2810 62 na GCF_000175495.1 PRJNA224116 SAMN02595337 ACSO00000000.1 na 553601 1280 Staphylococcus aureus A10102 strain=A10102 na latest Contig Major Full 2009-12-30 ASM17549v1 Broad Institute GCA_000175495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/495/GCF_000175495.1_ASM17549v1/ na na na haploid bacteria 2820632 2820632 33.000000 0 45 45 NCBI RefSeq GCF_000175495.1-RS_2025_08_25 2025-08-25 2845 2707 64 na GCF_000175515.1 PRJNA224116 SAMN02470776 ACUI00000000.1 na 658599 813 Chlamydia trachomatis L2tet1 strain=L2tet1 na latest Complete Genome Major Full 2010-01-26 ASM17551v1 Oregon State University GCA_000175515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/515/GCF_000175515.1_ASM17551v1/ na na na haploid bacteria 1076624 1076624 41.500000 1 1 1 NCBI RefSeq GCF_000175515.1-RS_2025_08_25 2025-08-25 978 908 49 na GCF_000175535.1 PRJNA224116 SAMN02470774 ACUJ00000000.1 na 658600 83560 Chlamydia muridarum MopnTet14 strain=MopnTet14 na latest Chromosome Major Full 2010-01-26 ASM17553v1 Oregon State University GCA_000175535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/535/GCF_000175535.1_ASM17553v1/ na na na haploid bacteria 1088736 1088623 40.500000 1 1 6 NCBI RefSeq GCF_000175535.1-RS_2026_02_16 2026-02-16 953 901 46 na GCF_000175555.1 PRJNA224116 SAMN00001854 ACUK00000000.1 na 555311 2287 Saccharolobus solfataricus 98/2 strain=98/2 na latest Contig Major Full 2009-07-20 ASM17555v1 Washington State University GCA_000175555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/555/GCF_000175555.1_ASM17555v1/ na na na haploid archaea 2680466 2680466 35.000000 0 506 506 NCBI RefSeq GCF_000175555.1-RS_2025_12_21 2025-12-21 3051 2736 50 na GCF_000175575.2 PRJNA224116 SAMN02469802 na na 637389 33059 Acidithiobacillus caldus ATCC 51756 strain=ATCC 51756 na latest Complete Genome Major Full 2014-05-27 ASM17557v2 Center for Bioinformatics and Genome Biology GCA_000175575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/575/GCF_000175575.2_ASM17557v2/ na assembly from type material na haploid bacteria 2987045 2987045 61.500000 4 4 4 NCBI RefSeq GCF_000175575.2-RS_2025_12_23 2025-12-23 3016 2883 58 19617360 GCF_000175595.1 PRJNA224116 SAMN02441784 ACVI00000000.1 na 536227 217159 Clostridium carboxidivorans P7 strain=P7 na latest Contig Major Full 2009-08-05 ASM17559v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000175595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/595/GCF_000175595.1_ASM17559v1/ na assembly from type material na haploid bacteria 5592854 5592854 29.500000 0 252 252 NCBI RefSeq GCF_000175595.1-RS_2026_04_14 2026-04-14 5391 5081 69 na GCF_000175615.1 PRJNA224116 SAMN00001919 ACVO00000000.1 reference genome 553201 43675 Rothia mucilaginosa ATCC 25296 strain=ATCC 25296 na latest Contig Major Full 2009-08-05 ASM17561v1 J. Craig Venter Institute GCA_000175615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/615/GCF_000175615.1_ASM17561v1/ na assembly from type material na haploid bacteria 2255158 2255158 59.500000 0 25 25 NCBI RefSeq GCF_000175615.1-RS_2026_05_01 2026-05-01 1784 1722 58 na GCF_000175635.1 PRJNA224116 SAMN00000719 ACVP00000000.1 na 553206 38304 Corynebacterium tuberculostearicum SK141 strain=SK141 na latest Contig Major Full 2009-08-05 ASM17563v1 J. Craig Venter Institute GCA_000175635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/635/GCF_000175635.1_ASM17563v1/ na na na haploid bacteria 2372261 2372261 60.000000 0 37 37 NCBI RefSeq GCF_000175635.1-RS_2026_04_23 2026-04-23 2282 2197 57 na GCF_000175655.1 PRJNA224116 SAMN00000722 ACVQ00000000.1 na 553219 204 Campylobacter showae RM3277 strain=RM3277 na latest Contig Major Full 2009-08-05 ASM17565v1 J. Craig Venter Institute GCA_000175655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/655/GCF_000175655.1_ASM17565v1/ na na na haploid bacteria 2072007 2072007 45.500000 0 33 33 NCBI RefSeq GCF_000175655.1-RS_2026_02_16 2026-02-16 2073 1999 45 na GCF_000175675.1 PRJNA224116 SAMN00001943 ACVR00000000.1 na 596318 40216 Acinetobacter radioresistens SK82 strain=SK82 na latest Contig Major Full 2009-08-05 ASM17567v1 J. Craig Venter Institute GCA_000175675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/675/GCF_000175675.1_ASM17567v1/ na na na haploid bacteria 3283705 3283705 41.500000 0 82 82 NCBI RefSeq GCF_000175675.1-RS_2026_05_23 2026-05-23 3177 3037 67 na GCF_000175695.1 PRJNA224116 SAMN02393814 ACVW00000000.1 na 661513 666 Vibrio cholerae CIRS101 strain=CIRS 101 na latest Contig Major Full 2009-08-11 ASM17569v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000175695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/695/GCF_000175695.1_ASM17569v1/ na na na haploid bacteria 4059686 4059686 47.500000 0 18 18 NCBI RefSeq GCF_000175695.1-RS_2026_02_16 2026-02-16 3734 3513 110 na GCF_000175735.1 PRJNA224116 SAMN02470826 ACXN00000000.1 na 570506 562 Escherichia coli O157:H7 str. FRIK966 strain=FRIK966 na latest Contig Major Full 2009-08-20 ASM17573v1 MBRI GCA_000175735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/735/GCF_000175735.1_ASM17573v1/ na na na haploid bacteria 5376914 5376914 50.000000 0 316 316 NCBI RefSeq GCF_000175735.1-RS_2025_06_14 2025-06-14 5561 5067 90 na GCF_000175755.1 PRJNA224116 SAMN02470827 ACXO00000000.1 na 637388 562 Escherichia coli O157:H7 str. FRIK2000 strain=FRIK2000 na latest Contig Major Full 2009-08-20 ASM17575v1 Medical Biofilm Research Institute GCA_000175755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/755/GCF_000175755.1_ASM17575v1/ na na na haploid bacteria 5408690 5408690 50.000000 0 247 247 NCBI RefSeq GCF_000175755.1-RS_2025_07_08 2025-07-08 5534 5094 90 na GCF_000175795.2 PRJNA224116 SAMN00002727 ACXX00000000.2 na 588581 29362 Ruminiclostridium papyrosolvens DSM 2782 strain=DSM 2782 na latest Contig Major Full 2011-03-14 ASM17579v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000175795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/795/GCF_000175795.2_ASM17579v2/ na assembly from type material na haploid bacteria 4915287 4915287 37.000000 0 31 31 NCBI RefSeq GCF_000175795.2-RS_2026_04_07 2026-04-07 4345 4201 80 na GCF_000175835.1 PRJNA224116 SAMN02470243 ACYA00000000.1 na 533240 77022 Cylindrospermopsis raciborskii CS-505 strain=CS-505 na latest Contig Major Full 2009-12-15 ASM17583v1 FLI Jena GCA_000175835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/835/GCF_000175835.1_ASM17583v1/ na na na haploid bacteria 3879030 3879030 40.000000 0 93 93 NCBI RefSeq GCF_000175835.1-RS_2026_04_14 2026-04-14 3601 3380 55 20169071 GCF_000175875.1 PRJNA224116 SAMN00000715 ACYG00000000.1 na 553220 824 Campylobacter gracilis RM3268 strain=RM3268 na latest Contig Major Full 2009-09-08 ASM17587v1 J. Craig Venter Institute GCA_000175875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/875/GCF_000175875.1_ASM17587v1/ na na na haploid bacteria 2255573 2255573 46.500000 0 33 33 NCBI RefSeq GCF_000175875.1-RS_2026_02_16 2026-02-16 2244 2139 46 na GCF_000175895.1 PRJNA224116 SAMN00001903 ACYH00000000.1 na 596324 69710 Treponema vincentii ATCC 35580 strain=ATCC 35580 na latest Contig Major Full 2009-09-08 ASM17589v1 J. Craig Venter Institute GCA_000175895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/895/GCF_000175895.1_ASM17589v1/ na na na haploid bacteria 2514590 2514590 45.500000 0 79 79 NCBI RefSeq GCF_000175895.1-RS_2026_02_16 2026-02-16 2382 2219 57 na GCF_000175935.2 PRJNA224116 SAMN00002769 na na 592316 592316 Pantoea sp. At-9b strain=At-9b na latest Complete Genome Major Full 2011-01-04 ASM17593v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000175935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/935/GCF_000175935.2_ASM17593v2/ na na na haploid bacteria 6312783 6312783 54.500000 6 6 6 NCBI RefSeq GCF_000175935.2-RS_2024_08_12 2024-08-12 5955 5758 108 na GCF_000175955.1 PRJNA224116 SAMN02595361 ACYO00000000.1 na 553574 1280 Staphylococcus aureus A8117 strain=A8117 na latest Contig Major Full 2009-12-31 ASM17595v1 Broad Institute GCA_000175955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/955/GCF_000175955.1_ASM17595v1/ na na na haploid bacteria 2715851 2715851 32.500000 0 32 32 NCBI RefSeq GCF_000175955.1-RS_2025_04_15 2025-04-15 2719 2575 72 22492855 GCF_000175975.1 PRJNA224116 SAMN02470247 ACYU00000000.1 na 671074 674 Vibrio mimicus VM603 strain=VM603 na latest Contig Major Full 2009-09-15 ASM17597v1 LNCC / UFRJ GCA_000175975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/975/GCF_000175975.1_ASM17597v1/ na na na haploid bacteria 4350709 4350709 46.500000 0 195 195 NCBI RefSeq GCF_000175975.1-RS_2026_03_20 2026-03-20 4046 3836 75 19860885 GCF_000175995.1 PRJNA224116 SAMN02470248 ACYV00000000.1 na 671076 674 Vibrio mimicus VM573 strain=VM573 na latest Contig Major Full 2009-09-15 ASM17599v1 LNCC / UFRJ GCA_000175995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/995/GCF_000175995.1_ASM17599v1/ na na na haploid bacteria 4366551 4366551 46.000000 0 74 74 NCBI RefSeq GCF_000175995.1-RS_2026_03_20 2026-03-20 4104 3738 112 19860885 GCF_000176015.1 PRJNA224116 SAMN00017479 ACYY00000000.1 reference genome 371731 371731 Rhodobacter ferrooxidans strain=SW2 na latest Contig Major Full 2009-09-22 ASM17601v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000176015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/015/GCF_000176015.1_ASM17601v1/ na na na haploid bacteria 3514342 3514342 65.000000 0 59 59 NCBI RefSeq GCF_000176015.1-RS_2025_11_20 2025-11-20 3486 3370 50 na GCF_000176035.2 PRJNA224116 SAMN02232036 na reference genome 536019 593909 Mesorhizobium opportunistum WSM2075 strain=WSM2075 na latest Complete Genome Major Full 2011-06-14 ASM17603v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000176035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/035/GCF_000176035.2_ASM17603v2/ na assembly from type material na haploid bacteria 6884444 6884444 63.000000 1 1 1 NCBI RefSeq GCF_000176035.2-RS_2026_04_29 2026-04-29 6713 6532 63 na GCF_000176075.1 PRJNA224116 SAMN02471471 ACZE00000000.1 na 159254 83552 Parachlamydia acanthamoebae str. Hall's coccus strain=Hall's coccus na latest Contig Major Full 2009-12-23 ASM17607v1 University of Lausanne GCA_000176075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/075/GCF_000176075.1_ASM17607v1/ na na na haploid bacteria 2971261 2971261 39.000000 0 95 95 NCBI RefSeq GCF_000176075.1-RS_2026_03_30 2026-03-30 2623 2515 40 20037647 GCF_000176095.1 PRJNA224116 SAMN02951933 ACZG00000000.1 na 638315 450 Legionella longbeachae D-4968 strain=D-4968 na latest Contig Major Full 2009-11-30 ASM17609v1 Centers for Disease Control and Prevention GCA_000176095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/095/GCF_000176095.1_ASM17609v1/ na na na haploid bacteria 4086210 4086210 37.000000 0 13 13 NCBI RefSeq GCF_000176095.1-RS_2026_03_20 2026-03-20 3622 3462 68 20008069 GCF_000176135.1 PRJNA224116 SAMN02393819 ACZN00000000.1 na 675814 190893 Vibrio coralliilyticus ATCC BAA-450 strain=ATCC BAA-450 na latest Contig Major Full 2009-10-06 ASM17613v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/135/GCF_000176135.1_ASM17613v1/ na assembly from type material na haploid bacteria 5680628 5680628 45.500000 0 20 20 NCBI RefSeq GCF_000176135.1-RS_2026_02_02 2026-02-02 5232 5040 126 22158392 GCF_000176155.1 PRJNA224116 SAMN02393820 ACZO00000000.1 na 675813 28172 Vibrio metschnikovii CIP 69.14 strain=CIP 69.14 na latest Contig Major Full 2009-10-06 ASM17615v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/155/GCF_000176155.1_ASM17615v1/ na assembly from type material na haploid bacteria 3815101 3815101 44.000000 0 11 11 NCBI RefSeq GCF_000176155.1-RS_2026_04_05 2026-04-05 3435 3210 117 na GCF_000176175.1 PRJNA224116 SAMN02393822 ACZP00000000.1 na 675811 29494 Vibrio furnissii CIP 102972 strain=CIP 102972 na latest Contig Major Full 2009-10-06 ASM17617v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/175/GCF_000176175.1_ASM17617v1/ na assembly from type material na haploid bacteria 4958664 4958664 50.500000 0 24 24 NCBI RefSeq GCF_000176175.1-RS_2026_02_15 2026-02-15 4619 4421 137 na GCF_000176195.1 PRJNA224116 SAMN02471722 ACZQ00000000.1 na 680649 1280 Staphylococcus aureus subsp. aureus MR1 strain=MR1 na latest Contig Major Full 2009-10-26 ASM17619v1 University of Edinburgh GCA_000176195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/195/GCF_000176195.1_ASM17619v1/ na na na haploid bacteria 2808969 2808969 32.500000 0 339 339 NCBI RefSeq GCF_000176195.1-RS_2025_04_15 2025-04-15 2912 2763 12 19884497 GCF_000176235.1 PRJNA224116 SAMN02393817 ACZV00000000.1 reference genome 675816 28175 Vibrio orientalis CIP 102891 = ATCC 33934 strain=CIP 102891 na latest Contig Major Full 2009-10-09 ASM17623v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/235/GCF_000176235.1_ASM17623v1/ na assembly from type material na haploid bacteria 4698244 4698244 45.000000 0 5 5 NCBI RefSeq GCF_000176235.1-RS_2026_04_23 2026-04-23 4342 4191 133 na GCF_000176255.1 PRJNA224116 SAMN02436663 ACZX00000000.1 na 669261 75985 Mannheimia haemolytica serotype A2 str. OVINE strain=OVINE na latest Contig Major Full 2009-10-14 ASM17625v1 Washington State University GCA_000176255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/255/GCF_000176255.1_ASM17625v1/ na na na haploid bacteria 2584200 2584200 41.000000 0 144 144 NCBI RefSeq GCF_000176255.1-RS_2026_03_20 2026-03-20 2689 2547 58 19966002 GCF_000176275.1 PRJNA224116 SAMN02436661 ACZY00000000.1 na 669262 75985 Mannheimia haemolytica serotype A2 str. BOVINE strain=BOVINE na latest Contig Major Full 2009-10-14 ASM17627v1 Washington State University GCA_000176275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/275/GCF_000176275.1_ASM17627v1/ na na na haploid bacteria 2478798 2478798 41.000000 0 84 84 NCBI RefSeq GCF_000176275.1-RS_2026_03_20 2026-03-20 2526 2388 61 19966002 GCF_000176335.1 PRJNA224116 SAMN00004572 ADAD00000000.1 na 596323 157692 Pseudoleptotrichia goodfellowii F0264 strain=F0264 na latest Contig Major Full 2009-10-20 ASM17633v1 J. Craig Venter Institute GCA_000176335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/335/GCF_000176335.1_ASM17633v1/ na na na haploid bacteria 2287284 2287284 31.500000 0 208 208 NCBI RefSeq GCF_000176335.1-RS_2026_01_27 2026-01-27 2357 2265 46 na GCF_000176355.1 PRJNA224116 SAMN02471020 ADAE00000000.1 reference genome 685035 72174 Citromicrobium bathyomarinum JL354 strain=JL354 na latest Contig Major Full 2009-11-16 ASM17635v1 State Key Laboratory of Marine Environmental Science GCA_000176355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/355/GCF_000176355.1_ASM17635v1/ na na na haploid bacteria 3273334 3273334 65.000000 0 68 68 NCBI RefSeq GCF_000176355.1-RS_2026_03_30 2026-03-30 3294 3218 52 19966001 GCF_000176375.1 PRJNA224116 SAMN02393827 ADAF00000000.1 na 675806 674 Vibrio mimicus MB451 strain=MB-451 na latest Contig Major Full 2009-10-23 ASM17637v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/375/GCF_000176375.1_ASM17637v1/ na na na haploid bacteria 4313453 4313453 46.500000 0 3 3 NCBI RefSeq GCF_000176375.1-RS_2026_02_06 2026-02-06 3993 3816 123 21078967 GCF_000176415.1 PRJNA224116 SAMN02393815 ADAJ00000000.1 na 675820 674 Vibrio mimicus VM223 strain=VM223 na latest Contig Major Full 2009-10-23 ASM17641v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/415/GCF_000176415.1_ASM17641v1/ na na na haploid bacteria 4347971 4347971 46.000000 0 8 8 NCBI RefSeq GCF_000176415.1-RS_2026_03_27 2026-03-27 4083 3880 116 21078967 GCF_000176515.1 PRJNA224116 SAMN02393821 ADAQ00000000.1 na 675812 673 Grimontia hollisae CIP 101886 strain=CIP 101886 na latest Contig Major Full 2009-10-29 ASM17651v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/515/GCF_000176515.1_ASM17651v1/ na assembly from type material na haploid bacteria 4002786 4002786 49.500000 0 13 13 NCBI RefSeq GCF_000176515.1-RS_2025_07_29 2025-07-29 3685 3510 136 na GCF_000176535.2 PRJNA224116 SAMN02595366 ADAU00000000.1 na 656414 562 Escherichia coli H736 strain=H736 na latest Scaffold Major Full 2011-04-29 ASM17653v2 Broad Institute GCA_000176535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/535/GCF_000176535.2_ASM17653v2/ na na na haploid bacteria 4707649 4652606 51.000000 0 38 135 NCBI RefSeq GCF_000176535.2-RS_2025_06_13 2025-06-13 4635 4267 94 na GCF_000176555.2 PRJNA224116 SAMN02595367 ADAV00000000.1 na 656417 562 Escherichia coli M605 strain=M605 na latest Scaffold Major Full 2011-04-29 ASM17655v2 Broad Institute GCA_000176555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/555/GCF_000176555.2_ASM17655v2/ na na na haploid bacteria 5477953 5446689 50.500000 0 83 162 NCBI RefSeq GCF_000176555.2-RS_2025_06_13 2025-06-13 5590 5146 106 na GCF_000176575.2 PRJNA224116 SAMN02595368 ADAW00000000.1 na 656419 562 Escherichia coli M718 strain=M718 na latest Scaffold Major Full 2011-04-29 ASM17657v2 Broad Institute GCA_000176575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/575/GCF_000176575.2_ASM17657v2/ na na na haploid bacteria 5413197 5365946 50.500000 0 67 188 NCBI RefSeq GCF_000176575.2-RS_2025_03_23 2025-03-23 5308 4824 103 na GCF_000176595.2 PRJNA224116 SAMN02595369 ADAX00000000.1 na 656440 562 Escherichia coli TA206 strain=TA206 na latest Scaffold Major Full 2011-04-29 ASM17659v2 Broad Institute GCA_000176595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/595/GCF_000176595.2_ASM17659v2/ na na na haploid bacteria 5122244 5055289 50.500000 0 38 187 NCBI RefSeq GCF_000176595.2-RS_2025_06_13 2025-06-13 5051 4613 87 na GCF_000176615.2 PRJNA224116 SAMN02595370 ADAY00000000.1 na 656437 562 Escherichia coli TA143 strain=TA143 na latest Scaffold Major Full 2011-04-29 ASM17661v2 Broad Institute GCA_000176615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/615/GCF_000176615.2_ASM17661v2/ na na na haploid bacteria 4889152 4829725 50.500000 0 43 168 NCBI RefSeq GCF_000176615.2-RS_2025_06_14 2025-06-14 4727 4338 100 na GCF_000176675.2 PRJNA224116 SAMN02595373 ADBB00000000.1 na 656408 562 Escherichia coli H591 strain=H591 na latest Scaffold Major Full 2011-04-29 ASM17667v2 Broad Institute GCA_000176675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/675/GCF_000176675.2_ASM17667v2/ na na na haploid bacteria 4977803 4918687 50.500000 0 82 190 NCBI RefSeq GCF_000176675.2-RS_2025_06_13 2025-06-13 4988 4582 101 na GCF_000176695.2 PRJNA224116 SAMN02595374 ADBC00000000.1 na 656393 562 Escherichia coli H299 strain=H299 na latest Scaffold Major Full 2011-04-29 ASM17669v2 Broad Institute GCA_000176695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/695/GCF_000176695.2_ASM17669v2/ na na na haploid bacteria 5317843 5248906 51.000000 0 113 229 NCBI RefSeq GCF_000176695.2-RS_2025_06_13 2025-06-13 5370 4951 112 na GCF_000176715.1 PRJNA224116 SAMN02393818 ADBD00000000.1 na 675815 675815 Vibrio sp. RC586 strain=RC586 na latest Contig Major Full 2009-11-03 ASM17671v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/715/GCF_000176715.1_ASM17671v1/ na na na haploid bacteria 4082591 4082591 46.500000 0 16 16 NCBI RefSeq NCBI Prokaryotic Genome Annotation Pipeline (PGAP) 2024-02-15 3776 3567 119 na GCF_000176775.1 PRJNA224116 SAMN00002501 ADBR00000000.1 na 596328 2052 Mobiluncus mulieris 28-1 strain=28-1 na latest Contig Major Full 2009-11-25 ASM17677v1 J. Craig Venter Institute GCA_000176775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/775/GCF_000176775.1_ASM17677v1/ na na na haploid bacteria 2452380 2452380 55.000000 0 55 55 NCBI RefSeq GCF_000176775.1-RS_2026_02_08 2026-02-08 2231 2125 52 na GCF_000176795.1 PRJNA224116 SAMN02393816 ADBS00000000.1 na 675817 38293 Photobacterium damselae subsp. damselae CIP 102761 strain=CIP 102761 na latest Scaffold Major Full 2009-11-13 ASM17679v1 Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR) GCA_000176795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/795/GCF_000176795.1_ASM17679v1/ na assembly from type material na haploid bacteria 5046328 5046301 40.500000 0 8 9 NCBI RefSeq GCF_000176795.1-RS_2026_03_03 2026-03-03 4603 4280 230 na GCF_000176835.2 PRJNA224116 SAMN02603255 na na 682634 82996 Serratia plymuthica 4Rx13 strain=4Rx13 na latest Complete Genome Major Full 2013-06-25 ASM17683v2 Georg-August Universität Göttingen GCA_000176835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/835/GCF_000176835.2_ASM17683v2/ na na na haploid bacteria 5403731 5403731 56.000000 2 2 2 NCBI RefSeq GCF_000176835.2-RS_2026_01_30 2026-01-30 5048 4818 118 na GCF_000176855.2 PRJNA224116 SAMN00006197 na reference genome 643561 80867 Paracidovorax avenae ATCC 19860 strain=ATCC 19860 na latest Complete Genome Major Full 2011-02-14 ASM17685v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000176855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/855/GCF_000176855.2_ASM17685v2/ na assembly from type material na haploid bacteria 5482170 5482170 69.000000 1 1 1 NCBI RefSeq GCF_000176855.2-RS_2026_07_01 2026-07-01 4873 4780 64 na GCF_000176875.1 PRJNA224116 SAMN00008343 ADCD00000000.1 na 596312 1270 Micrococcus luteus SK58 strain=SK58 na latest Contig Major Full 2010-02-24 ASM17687v1 J. Craig Venter Institute GCA_000176875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/875/GCF_000176875.1_ASM17687v1/ na na na haploid bacteria 2622687 2622687 72.500000 0 112 112 NCBI RefSeq GCF_000176875.1-RS_2025_08_05 2025-08-05 2511 2371 59 na GCF_000176915.2 PRJNA224116 SAMN00713573 na reference genome 643562 182210 Pseudodesulfovibrio aespoeensis Aspo-2 strain=Aspo-2 na latest Complete Genome Major Full 2011-01-04 ASM17691v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000176915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/915/GCF_000176915.2_ASM17691v2/ na assembly from type material na haploid bacteria 3629109 3629109 62.500000 1 1 1 NCBI RefSeq GCF_000176915.2-RS_2025_12_09 2025-12-09 3399 3302 65 24874683 GCF_000176955.1 PRJNA224116 SAMN00008345 ADDO00000000.1 na 596330 33031 Peptoniphilus lacrimalis 315-B strain=315-B na latest Contig Major Full 2009-12-15 ASM17695v1 J. Craig Venter Institute GCA_000176955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/955/GCF_000176955.1_ASM17695v1/ na na na haploid bacteria 1699205 1699205 30.000000 0 71 71 NCBI RefSeq GCF_000176955.1-RS_2026_02_16 2026-02-16 1635 1555 46 na GCF_000176975.2 PRJNA224116 SAMN02463837 ADDT00000000.1 na 575598 47770 Lactobacillus crispatus SJ-3C-US strain=SJ-3C-US na latest Scaffold Major Full 2014-08-27 ASM17697v2 Broad Institute GCA_000176975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/975/GCF_000176975.2_ASM17697v2/ na na na haploid bacteria 2165034 2087874 36.500000 0 70 201 NCBI RefSeq GCF_000176975.2-RS_2026_01_31 2026-01-31 2327 1988 73 na GCF_000176995.2 PRJNA224116 SAMN02463838 ADDU00000000.1 na 575603 1596 Lactobacillus gasseri SJ-9E-US strain=SJ-9E-US na latest Scaffold Major Full 2014-08-27 ASM17699v2 Broad Institute GCA_000176995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/995/GCF_000176995.2_ASM17699v2/ na na na haploid bacteria 1784458 1782002 35.000000 0 8 15 NCBI RefSeq GCF_000176995.2-RS_2026_01_31 2026-01-31 1750 1637 67 na GCF_000177035.2 PRJNA224116 SAMN02463842 ADDY00000000.1 na 575604 1596 Lactobacillus gasseri SV-16A-US strain=SV-16A-US na latest Scaffold Major Full 2014-08-27 ASM17703v2 Broad Institute GCA_000177035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/035/GCF_000177035.2_ASM17703v2/ na na na haploid bacteria 2001744 1985958 35.000000 0 10 43 NCBI RefSeq GCF_000177035.2-RS_2026_01_31 2026-01-31 2029 1885 73 na GCF_000177055.1 PRJNA224116 SAMN00003362 ADEF00000000.1 na 679189 386414 Hoylesella timonensis CRIS 5C-B1 strain=CRIS 5C-B1 na latest Contig Major Full 2009-12-15 ASM17705v1 JCVI GCA_000177055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/055/GCF_000177055.1_ASM17705v1/ na na na haploid bacteria 2796067 2796067 42.000000 0 72 72 NCBI RefSeq GCF_000177055.1-RS_2025_09_23 2025-09-23 2271 2166 56 na GCF_000177075.1 PRJNA224116 SAMN00003363 ADEG00000000.1 na 679190 28127 Hoylesella buccalis ATCC 35310 strain=ATCC 35310 na latest Contig Major Full 2009-12-15 ASM17707v1 JCVI GCA_000177075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/075/GCF_000177075.1_ASM17707v1/ na assembly from type material na haploid bacteria 3033961 3033961 45.500000 0 118 118 NCBI RefSeq GCF_000177075.1-RS_2025_09_23 2025-09-23 2508 2375 56 na GCF_000177115.1 PRJNA224116 SAMN00008358 ADEY00000000.1 na 596317 1282 Staphylococcus epidermidis SK135 strain=SK135 na latest Contig Major Full 2009-12-15 ASM17711v1 J. Craig Venter Institute GCA_000177115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/115/GCF_000177115.1_ASM17711v1/ na na na haploid bacteria 2518045 2518045 32.000000 0 33 33 NCBI RefSeq GCF_000177115.1-RS_2026_02_16 2026-02-16 2440 2200 93 na GCF_000177135.1 PRJNA224116 SAMN02472084 ADFA00000000.1 na 693750 693750 Brucella sp. BO2 strain=BO2 na latest Contig Major Full 2010-09-03 ASM17713v1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA GCA_000177135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/135/GCF_000177135.1_ASM17713v1/ na na na haploid bacteria 3305941 3305941 57.000000 0 174 174 NCBI RefSeq GCF_000177135.1-RS_2024_06_06 2024-06-06 3243 3088 57 na GCF_000177155.1 PRJNA224116 SAMN02472085 ADFB00000000.1 na 693748 693748 Brucella sp. NF 2653 strain=NF 2653 na latest Contig Major Full 2010-09-03 ASM17715v1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA GCA_000177155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/155/GCF_000177155.1_ASM17715v1/ na na na haploid bacteria 3110281 3110281 57.000000 0 113 113 NCBI RefSeq GCF_000177155.1-RS_2024_06_01 2024-06-01 3025 2768 56 na GCF_000177175.2 PRJNA224116 SAMN00713595 ADFC00000000.2 na 1609288 1609288 Streptomyces sp. ACT-1 strain=XylebKG-1 na latest Scaffold Major Full 2011-03-23 ASM17717v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/175/GCF_000177175.2_ASM17717v2/ na na na haploid bacteria 8731683 8731583 72.000000 0 2 4 NCBI RefSeq GCF_000177175.2-RS_2025_08_25 2025-08-25 7494 7275 88 21460079 GCF_000177195.2 PRJNA224116 SAMN02232054 na na 862751 862751 Streptomyces sp. SirexAA-E strain=SirexAA-E na latest Complete Genome Major Full 2011-08-26 ASM17719v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/195/GCF_000177195.2_ASM17719v2/ na na na haploid bacteria 7414440 7414440 71.500000 1 1 1 NCBI RefSeq GCF_000177195.2-RS_2024_05_08 2024-05-08 6619 6385 87 24710170 GCF_000177215.2 PRJNA224116 SAMN02256536 ADFE00000000.2 reference genome 694327 345370 Solidesulfovibrio carbinoliphilus subsp. oakridgensis strain=FW-101-2B na latest Chromosome Major Full 2011-11-18 ASM17721v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/215/GCF_000177215.2_ASM17721v2/ na assembly from type material na haploid bacteria 4221670 4221470 66.500000 3 3 5 NCBI RefSeq GCF_000177215.2-RS_2026_03_12 2026-03-12 3818 3730 70 25767232 GCF_000177235.2 PRJNA224116 SAMN00007429 na reference genome 649639 1413 Evansella cellulosilytica DSM 2522 strain=DSM 2522 na latest Complete Genome Major Full 2010-12-27 ASM17723v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/235/GCF_000177235.2_ASM17723v2/ na assembly from type material na haploid bacteria 4681672 4681672 36.500000 1 1 1 NCBI RefSeq GCF_000177235.2-RS_2026_05_01 2026-05-01 4420 4265 117 na GCF_000177315.1 PRJNA224116 SAMN00008342 ADFO00000000.1 na 553171 28125 Prevotella bivia JCVIHMP010 strain=JCVIHMP010 na latest Contig Major Full 2009-12-30 ASM17731v1 J. Craig Venter Institute GCA_000177315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/315/GCF_000177315.1_ASM17731v1/ na assembly from type material na haploid bacteria 2424432 2424432 40.000000 0 121 121 NCBI RefSeq GCF_000177315.1-RS_2026_01_08 2026-01-08 2141 2014 51 na GCF_000177335.1 PRJNA224116 SAMN00002506 ADFP00000000.1 na 352165 638849 Pyramidobacter piscolens W5455 strain=W5455 na latest Contig Major Full 2009-12-30 ASM17733v1 J. Craig Venter Institute GCA_000177335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/335/GCF_000177335.1_ASM17733v1/ na assembly from type material na haploid bacteria 2562014 2562014 60.000000 0 140 140 NCBI RefSeq GCF_000177335.1-RS_2026_02_14 2026-02-14 2489 2393 62 na GCF_000177355.1 PRJNA224116 SAMN00003364 ADFQ00000000.1 reference genome 679191 419005 Prevotella amnii CRIS 21A-A strain=CRIS 21A-A na latest Contig Major Full 2010-09-21 ASM17735v1 JCVI GCA_000177355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/355/GCF_000177355.1_ASM17735v1/ na na na haploid bacteria 2415558 2415558 36.500000 0 117 117 NCBI RefSeq GCF_000177355.1-RS_2025_11_21 2025-11-21 2139 2004 55 na GCF_000177375.1 PRJNA224116 SAMN00003365 ADFR00000000.1 reference genome 679192 118748 Bulleidia extructa W1219 strain=W1219 na latest Contig Major Full 2010-01-05 ASM17737v1 JCVI GCA_000177375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/375/GCF_000177375.1_ASM17737v1/ na assembly from type material na haploid bacteria 1419583 1419583 36.500000 0 16 16 NCBI RefSeq GCF_000177375.1-RS_2025_12_13 2025-12-13 1455 1399 47 na GCF_000177395.1 PRJNA224116 SAMN00015387 ADFS00000000.1 na 679194 1747 Cutibacterium acnes J139 strain=J139 na latest Contig Major Full 2009-12-30 ASM17739v1 JCVI GCA_000177395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/395/GCF_000177395.1_ASM17739v1/ na na na haploid bacteria 2481963 2481963 60.000000 0 7 7 NCBI RefSeq GCF_000177395.1-RS_2026_05_01 2026-05-01 2407 2199 51 na GCF_000177435.1 PRJNA224116 SAMN00009759 ADFU00000000.1 na 686660 29466 Veillonella parvula ATCC 17745 strain=ATCC 17745 na latest Contig Major Full 2009-12-30 ASM17743v1 JCVI GCA_000177435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/435/GCF_000177435.1_ASM17743v1/ na assembly from heterotypic synonym type material na haploid bacteria 2163473 2163473 38.500000 0 19 19 NCBI RefSeq GCF_000177435.1-RS_2026_05_16 2026-05-16 2008 1933 55 na GCF_000177455.1 PRJNA224116 SAMN02472092 ADFY00000000.1 na 673189 251701 Pseudomonas syringae pv. tomato K40 strain=K40 na latest Contig Major Full 2010-02-04 ASM17745v1 Virginia Tech GCA_000177455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/455/GCF_000177455.1_ASM17745v1/ na na na haploid bacteria 6153658 6153658 58.500000 0 582 582 NCBI RefSeq GCF_000177455.1-RS_2026_02_16 2026-02-16 5918 5564 46 na GCF_000177475.1 PRJNA224116 SAMN02472093 ADFZ00000000.1 na 673198 251701 Pseudomonas syringae pv. tomato Max13 strain=Max13 na latest Contig Major Full 2010-01-25 ASM17747v1 Virginia Tech GCA_000177475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/475/GCF_000177475.1_ASM17747v1/ na na na haploid bacteria 6105073 6105073 58.500000 0 349 349 NCBI RefSeq GCF_000177475.1-RS_2026_02_16 2026-02-16 5822 5532 51 na GCF_000177495.1 PRJNA224116 SAMN02472091 ADGA00000000.1 na 673265 251701 Pseudomonas syringae pv. tomato NCPPB 1108 strain=NCPPB 1108 na latest Contig Major Full 2010-02-04 ASM17749v1 Virginia Tech GCA_000177495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/495/GCF_000177495.1_ASM17749v1/ na na na haploid bacteria 6082048 6082048 58.500000 0 304 304 NCBI RefSeq GCF_000177495.1-RS_2026_02_16 2026-02-16 5702 5445 50 na GCF_000177535.2 PRJNA224116 SAMN02603065 na reference genome 662755 258224 Corynebacterium resistens DSM 45100 strain=DSM 45100 na latest Complete Genome Major Full 2011-06-15 ASM17753v2 Center for Biotechnology, Bielefeld University GCA_000177535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/535/GCF_000177535.2_ASM17753v2/ na assembly from type material na haploid bacteria 2601311 2601311 57.000000 1 1 1 NCBI RefSeq GCF_000177535.2-RS_2025_12_11 2025-12-11 2283 2158 63 22524407 GCF_000177555.1 PRJNA224116 SAMN00006220 ADGP00000000.1 na 1000568 1000568 Megasphaera lornae strain=28L na latest Contig Major Full 2010-03-09 ASM17755v1 JCVI GCA_000177555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/555/GCF_000177555.1_ASM17755v1/ na na na haploid bacteria 1726197 1726197 46.000000 0 34 34 NCBI RefSeq GCF_000177555.1-RS_2025_09_08 2025-09-08 1622 1549 56 na GCF_000177575.1 PRJNA224116 SAMN00003361 ADGR00000000.1 na 679188 47770 Lactobacillus crispatus 214-1 strain=214-1 na latest Contig Major Full 2010-03-11 ASM17757v1 JCVI GCA_000177575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/575/GCF_000177575.1_ASM17757v1/ na na na haploid bacteria 2068805 2068805 37.000000 0 187 187 NCBI RefSeq GCF_000177575.1-RS_2026_02_16 2026-02-16 2163 1987 60 na GCF_000177595.1 PRJNA224116 SAMN02471820 ADGS00000000.1 na 703612 96241 Bacillus spizizenii ATCC 6633 = JCM 2499 strain=ATCC 6633 na latest Contig Major Full 2010-05-17 ASM17759v1 Department of Microbiology, University of Illinois, Urbana-Champaign GCA_000177595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/595/GCF_000177595.1_ASM17759v1/ na na na haploid bacteria 3978576 3978576 44.000000 0 37 37 NCBI RefSeq GCF_000177595.1-RS_2025_12_14 2025-12-14 4109 3880 79 na GCF_000177615.2 PRJNA224116 SAMN00713636 na na 2716812 2716812 Candidatus Protofrankia datiscae strain=Dg1 na latest Complete Genome Major Full 2011-06-06 ASM17761v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/615/GCF_000177615.2_ASM17761v2/ na na na haploid bacteria 5340989 5340989 70.000000 3 3 3 NCBI RefSeq GCF_000177615.2-RS_2025_06_16 2025-06-16 4606 4335 54 22123767 GCF_000177635.2 PRJNA224116 SAMN02232016 na reference genome 653733 936456 Desulfurispirillum indicum S5 strain=S5 na latest Complete Genome Major Full 2011-01-04 ASM17763v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/635/GCF_000177635.2_ASM17763v2/ na assembly from type material na haploid bacteria 2928377 2928377 56.000000 1 1 1 NCBI RefSeq GCF_000177635.2-RS_2026_05_05 2026-05-05 2658 2585 50 na GCF_000177655.2 PRJNA224116 SAMN00008473 na na 648999 648999 Micromonospora sp. L5 strain=L5 na latest Complete Genome Major Full 2010-12-22 ASM17765v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000177655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/655/GCF_000177655.2_ASM17765v2/ na na na haploid bacteria 6962533 6962533 73.000000 1 1 1 NCBI RefSeq GCF_000177655.2-RS_2024_08_13 2024-08-13 6335 6184 64 24072863 GCF_000177675.1 PRJNA224116 SAMN02441797 ADGX00000000.1 na 102897 102897 Parafrankia sp. EUN1f strain=EUN1f na latest Contig Major Full 2010-02-04 ASM17767v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000177675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/675/GCF_000177675.1_ASM17767v1/ na na na haploid bacteria 9352740 9352740 71.000000 0 396 396 NCBI RefSeq GCF_000177675.1-RS_2024_08_13 2024-08-13 8067 7576 61 na GCF_000177695.1 PRJNA224116 SAMN02469414 ADGZ00000000.1 na 710094 470 Acinetobacter baumannii AB056 strain=AB056 na latest Contig Major Full 2010-01-25 ASM17769v1 Case Western Reserve University GCA_000177695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/695/GCF_000177695.1_ASM17769v1/ na na na haploid bacteria 3844254 3844254 39.000000 0 959 959 NCBI RefSeq GCF_000177695.1-RS_2026_02_09 2026-02-09 4033 3726 24 20530228 GCF_000177715.1 PRJNA224116 SAMN02469415 ADHA00000000.1 na 710095 470 Acinetobacter baumannii AB058 strain=AB058 na latest Contig Major Full 2010-01-25 ASM17771v1 Case Western Reserve University GCA_000177715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/715/GCF_000177715.1_ASM17771v1/ na na na haploid bacteria 3765368 3765368 39.000000 0 1040 1040 NCBI RefSeq GCF_000177715.1-RS_2025_09_10 2025-09-10 3986 3646 25 20530228 GCF_000177735.1 PRJNA224116 SAMN02469412 ADHB00000000.1 na 710096 470 Acinetobacter baumannii AB059 strain=AB059 na latest Contig Major Full 2010-01-25 ASM17773v1 Case Western Reserve University GCA_000177735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/735/GCF_000177735.1_ASM17773v1/ na na na haploid bacteria 3909418 3909418 39.000000 0 1062 1062 NCBI RefSeq GCF_000177735.1-RS_2026_02_09 2026-02-09 4168 3812 26 20530228 GCF_000177755.1 PRJNA224116 SAMN02470230 ADHG00000000.1 na 713605 147802 Lactobacillus iners AB-1 strain=AB-1 na latest Contig Major Full 2010-02-02 ASM17775v1 University of Western Ontario GCA_000177755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/755/GCF_000177755.1_ASM17775v1/ na na na haploid bacteria 1287456 1287456 32.500000 0 7 7 NCBI RefSeq GCF_000177755.1-RS_2026_04_02 2026-04-02 1245 1169 52 21059957 GCF_000177775.1 PRJNA224116 SAMN02393772 ADHN00000000.1 na 595501 1313 Streptococcus pneumoniae BS455 strain=BS455 na latest Contig Major Full 2010-08-11 ASM17777v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000177775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/775/GCF_000177775.1_ASM17777v1/ na na na haploid bacteria 2084124 2084124 39.500000 0 113 113 NCBI RefSeq GCF_000177775.1-RS_2026_02_16 2026-02-16 2190 1953 43 na GCF_000177795.2 PRJNA224116 SAMN02595382 ADHS00000000.1 na 675514 1773 Mycobacterium tuberculosis SUMu003 strain=SUMu003 na latest Scaffold Major Full 2010-11-28 ASM17779v2 Broad Institute GCA_000177795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/795/GCF_000177795.2_ASM17779v2/ na na na haploid bacteria 4377068 4345124 65.500000 0 63 174 NCBI RefSeq GCF_000177795.2-RS_2025_06_28 2025-06-28 4299 3969 51 na GCF_000177815.2 PRJNA224116 SAMN02595383 ADHT00000000.1 na 675515 1773 Mycobacterium tuberculosis SUMu004 strain=SUMu004 na latest Scaffold Major Full 2010-11-30 ASM17781v2 Broad Institute GCA_000177815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/815/GCF_000177815.2_ASM17781v2/ na na na haploid bacteria 4371565 4338184 65.500000 0 64 185 NCBI RefSeq GCF_000177815.2-RS_2025_06_29 2025-06-29 4302 3961 51 na GCF_000177835.2 PRJNA224116 SAMN02595384 ADHU00000000.1 na 675516 1773 Mycobacterium tuberculosis SUMu005 strain=SUMu005 na latest Scaffold Major Full 2010-11-30 ASM17783v2 Broad Institute GCA_000177835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/835/GCF_000177835.2_ASM17783v2/ na na na haploid bacteria 4376086 4331659 65.500000 0 55 177 NCBI RefSeq GCF_000177835.2-RS_2025_06_28 2025-06-28 4298 3907 51 na GCF_000177875.2 PRJNA224116 SAMN02595386 ADHW00000000.1 na 675518 1773 Mycobacterium tuberculosis SUMu007 strain=SUMu007 na latest Scaffold Major Full 2010-11-30 ASM17787v2 Broad Institute GCA_000177875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/875/GCF_000177875.2_ASM17787v2/ na na na haploid bacteria 4364362 4321517 65.500000 0 41 155 NCBI RefSeq GCF_000177875.2-RS_2025_06_29 2025-06-29 4272 3893 51 na GCF_000177895.2 PRJNA224116 SAMN02595387 ADHX00000000.1 na 675519 1773 Mycobacterium tuberculosis SUMu008 strain=SUMu008 na latest Scaffold Major Full 2010-11-30 ASM17789v2 Broad Institute GCA_000177895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/895/GCF_000177895.2_ASM17789v2/ na na na haploid bacteria 4376842 4327514 65.500000 0 41 191 NCBI RefSeq GCF_000177895.2-RS_2025_06_29 2025-06-29 4298 3902 51 na GCF_000177915.2 PRJNA224116 SAMN02595388 ADHY00000000.1 na 675520 1773 Mycobacterium tuberculosis SUMu009 strain=SUMu009 na latest Scaffold Major Full 2010-11-30 ASM17791v2 Broad Institute GCA_000177915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/915/GCF_000177915.2_ASM17791v2/ na na na haploid bacteria 4375659 4320544 65.500000 0 46 170 NCBI RefSeq GCF_000177915.2-RS_2025_06_28 2025-06-28 4279 3894 51 na GCF_000177935.2 PRJNA224116 SAMN02595389 ADHZ00000000.1 na 675521 1773 Mycobacterium tuberculosis SUMu010 strain=SUMu010 na latest Scaffold Major Full 2010-11-30 ASM17793v2 Broad Institute GCA_000177935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/935/GCF_000177935.2_ASM17793v2/ na na na haploid bacteria 4407182 4352987 65.500000 0 52 184 NCBI RefSeq GCF_000177935.2-RS_2025_06_29 2025-06-29 4313 3943 51 na GCF_000177995.1 PRJNA224116 SAMN02595392 ADJI00000000.1 na 553590 1280 Staphylococcus aureus A9754 strain=A9754 na latest Contig Major Full 2010-04-16 ASM17799v1 Broad Institute GCA_000177995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/177/995/GCF_000177995.1_ASM17799v1/ na na na haploid bacteria 2930317 2930317 32.500000 0 59 59 NCBI RefSeq GCF_000177995.1-RS_2025_08_25 2025-08-25 2999 2812 74 na GCF_000178015.1 PRJNA224116 SAMN02595393 ADJJ00000000.1 na 553577 1280 Staphylococcus aureus A8796 strain=A8796 na latest Contig Major Full 2010-05-28 ASM17801v1 Broad Institute GCA_000178015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/015/GCF_000178015.1_ASM17801v1/ na na na haploid bacteria 2968236 2968236 33.000000 0 98 98 NCBI RefSeq GCF_000178015.1-RS_2025_08_25 2025-08-25 3124 2916 77 na GCF_000178035.1 PRJNA224116 SAMN02595394 ADJK00000000.1 na 553580 1280 Staphylococcus aureus A8819 strain=A8819 na latest Contig Major Full 2010-04-20 ASM17803v1 Broad Institute GCA_000178035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/035/GCF_000178035.1_ASM17803v1/ na na na haploid bacteria 2916471 2916471 33.000000 0 48 48 NCBI RefSeq GCF_000178035.1-RS_2025_08_25 2025-08-25 3003 2818 83 na GCF_000178055.1 PRJNA224116 SAMN00031757 ADJL00000000.1 na 679195 1747 Cutibacterium acnes J165 strain=J165 na latest Contig Major Full 2010-02-18 ASM17805v1 JCVI GCA_000178055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/055/GCF_000178055.1_ASM17805v1/ na na na haploid bacteria 2500083 2500083 60.000000 0 62 62 NCBI RefSeq GCF_000178055.1-RS_2026_05_02 2026-05-02 2491 2332 54 na GCF_000178075.1 PRJNA224116 SAMN00031756 ADJM00000000.1 na 686659 1747 Cutibacterium acnes SK187 strain=SK187 na latest Contig Major Full 2010-02-18 ASM17807v1 JCVI GCA_000178075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/075/GCF_000178075.1_ASM17807v1/ na na na haploid bacteria 2510934 2510934 60.000000 0 37 37 NCBI RefSeq GCF_000178075.1-RS_2025_08_07 2025-08-07 2450 2299 52 na GCF_000178095.1 PRJNA224116 SAMN00002160 ADJN00000000.1 reference genome 596329 1261 Peptostreptococcus anaerobius 653-L strain=653-L na latest Contig Major Full 2010-02-18 ASM17809v1 J. Craig Venter Institute GCA_000178095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/095/GCF_000178095.1_ASM17809v1/ na na na haploid bacteria 2083092 2083092 36.000000 0 73 73 NCBI RefSeq GCF_000178095.1-RS_2025_12_13 2025-12-13 1937 1849 58 na GCF_000178115.2 PRJNA224116 SAMN00008641 na reference genome 663278 253239 Ethanoligenens harbinense YUAN-3 strain=YUAN-3 na latest Complete Genome Major Full 2010-12-27 ASM17811v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/115/GCF_000178115.2_ASM17811v2/ na assembly from type material na haploid bacteria 3008576 3008576 55.500000 1 1 1 NCBI RefSeq GCF_000178115.2-RS_2026_04_14 2026-04-14 2891 2790 76 na GCF_000178155.2 PRJNA224116 SAMN02436640 ADKM00000000.2 na 246199 1264 Hominimerdicola alba 8 strain=8 na latest Contig Major Full 2011-02-25 ASM17815v2 TIGR GCA_000178155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/155/GCF_000178155.2_ASM17815v2/ na na na haploid bacteria 4052160 4052160 46.500000 0 136 136 NCBI RefSeq GCF_000178155.2-RS_2025_06_06 2025-06-06 3729 3599 63 na GCF_000178175.1 PRJNA224116 SAMN00014269 ADKN00000000.1 na 791166 1351 Enterococcus faecalis PC1.1 strain=PC1.1 na latest Contig Major Full 2010-04-08 ASM17817v1 J. Craig Venter Institute GCA_000178175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/175/GCF_000178175.1_ASM17817v1/ na na na haploid bacteria 2753923 2753923 37.500000 0 79 79 NCBI RefSeq GCF_000178175.1-RS_2025_04_22 2025-04-22 2657 2568 56 23469340 GCF_000178195.1 PRJNA224116 SAMN00007490 ADKO00000000.1 na 702446 821 Phocaeicola vulgatus PC510 strain=PC510 na latest Contig Major Full 2010-04-08 ASM17819v1 J. Craig Venter Institute GCA_000178195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/195/GCF_000178195.1_ASM17819v1/ na na na haploid bacteria 4781702 4781702 42.500000 0 117 117 NCBI RefSeq GCF_000178195.1-RS_2026_05_02 2026-05-02 3966 3798 66 21622758 GCF_000178215.1 PRJNA224116 SAMN00007489 ADKP00000000.1 na 702447 371601 Bacteroides xylanisolvens SD CC 1b strain=SD CC 1b na latest Contig Major Full 2010-04-08 ASM17821v1 J. Craig Venter Institute GCA_000178215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/215/GCF_000178215.1_ASM17821v1/ na na na haploid bacteria 6059812 6059812 42.000000 0 236 236 NCBI RefSeq GCF_000178215.1-RS_2025_12_22 2025-12-22 4920 4631 60 na GCF_000178235.1 PRJNA224116 SAMN00014270 ADMM00000000.1 na 791161 1352 Enterococcus faecium PC4.1 strain=PC4.1 na latest Contig Major Full 2010-03-30 ASM17823v1 J. Craig Venter Institute GCA_000178235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/235/GCF_000178235.1_ASM17823v1/ na na na haploid bacteria 2811160 2811160 38.000000 0 78 78 NCBI RefSeq GCF_000178235.1-RS_2026_01_22 2026-01-22 2717 2529 45 24503986 GCF_000178255.1 PRJNA224116 SAMN00007491 ADMN00000000.1 na 702450 154288 Turicibacter sanguinis PC909 strain=PC909 na latest Contig Major Full 2010-03-30 ASM17825v1 JCVI GCA_000178255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/255/GCF_000178255.1_ASM17825v1/ na na na haploid bacteria 2953411 2953411 34.000000 0 125 125 NCBI RefSeq GCF_000178255.1-RS_2026_02_06 2026-02-06 2899 2808 70 21183674 GCF_000178275.1 PRJNA224116 SAMN00008359 ADMO00000000.1 na 702443 28116 Bacteroides ovatus SD CMC 3f strain=SD CMC 3f na latest Contig Major Full 2010-03-30 ASM17827v1 J. Craig Venter Institute GCA_000178275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/275/GCF_000178275.1_ASM17827v1/ na na na haploid bacteria 6775279 6775279 42.000000 0 156 156 NCBI RefSeq GCF_000178275.1-RS_2025_01_08 2025-01-08 5483 5223 75 na GCF_000178315.1 PRJNA224116 SAMN02470601 ADMX00000000.1 na 702430 562 Escherichia coli O157:H7 str. EC4009 strain=EC4009 na latest Contig Major Full 2010-05-10 ASM17831v1 National Bioforensic Analysis Center GCA_000178315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/315/GCF_000178315.1_ASM17831v1/ na na na haploid bacteria 5194891 5194891 50.000000 0 277 277 NCBI RefSeq GCF_000178315.1-RS_2025_06_16 2025-06-16 5247 4773 71 na GCF_000178335.1 PRJNA224116 SAMN02471011 ADNA00000000.1 na 525256 82135 Fannyhessea vaginae DSM 15829 strain=DSM 15829 na latest Scaffold Major Full 2010-04-07 ASM17833v1 Stanford Genome Technology Center GCA_000178335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/335/GCF_000178335.1_ASM17833v1/ na assembly from type material na haploid bacteria 1418601 1418578 42.500000 0 52 53 NCBI RefSeq GCF_000178335.1-RS_2025_12_04 2025-12-04 1211 1155 47 20418427 GCF_000178355.1 PRJNA224116 SAMN02471014 ADNB00000000.1 na 585528 2702 Gardnerella vaginalis ATCC 14018 = JCM 11026 strain=ATCC 14018 na latest Scaffold Major Full 2010-04-07 ASM17835v1 Stanford Genome Technology Center GCA_000178355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/355/GCF_000178355.1_ASM17835v1/ na assembly from type material na haploid bacteria 1604161 1603713 41.000000 0 145 156 NCBI RefSeq GCF_000178355.1-RS_2025_08_18 2025-08-18 1366 1228 41 20418427 GCF_000178375.1 PRJNA224116 SAMN02436327 ADNC00000000.1 reference genome 747682 47687 Mycoplasmopsis alligatoris A21JP2 strain=A21JP2 na latest Contig Major Full 2010-03-30 ASM17837v1 J. Craig Venter Institute GCA_000178375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/375/GCF_000178375.1_ASM17837v1/ na assembly from type material na haploid bacteria 973030 973030 26.500000 0 33 33 NCBI RefSeq GCF_000178375.1-RS_2025_12_13 2025-12-13 846 785 41 na GCF_000178395.2 PRJNA224116 SAMN02232024 na na 634956 1426 Parageobacillus thermoglucosidasius C56-YS93 strain=C56-YS93 na latest Complete Genome Major Full 2011-06-10 ASM17839v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/395/GCF_000178395.2_ASM17839v2/ na na na haploid bacteria 3993793 3993793 44.000000 3 3 3 NCBI RefSeq GCF_000178395.2-RS_2026_03_31 2026-03-31 4101 3815 122 26442136 GCF_000178435.1 PRJNA224116 SAMN00139312 ADNT00000000.1 na 655812 1377 Aerococcus viridans ATCC 11563 = CCUG 4311 strain=ATCC 11563 na latest Contig Major Full 2010-04-20 ASM17843v1 Baylor College of Medicine GCA_000178435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/435/GCF_000178435.1_ASM17843v1/ na assembly from type material na haploid bacteria 2005853 2005853 39.500000 0 150 150 NCBI RefSeq GCF_000178435.1-RS_2026_04_07 2026-04-07 1930 1815 50 na GCF_000178455.1 PRJNA224116 SAMN00139181 ADNU00000000.1 reference genome 585530 53363 Brevibacterium mcbrellneri ATCC 49030 strain=ATCC 49030 na latest Contig Major Full 2010-04-20 ASM17845v1 Baylor College of Medicine GCA_000178455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/455/GCF_000178455.1_ASM17845v1/ na assembly from type material na haploid bacteria 2561804 2561804 58.000000 0 96 96 NCBI RefSeq GCF_000178455.1-RS_2026_05_01 2026-05-01 2425 2316 55 na GCF_000178475.1 PRJNA224116 SAMN00262700 ADNY00000000.1 na 585524 83683 Lactobacillus amylolyticus DSM 11664 strain=DSM 11664 na latest Contig Major Full 2010-04-23 ASM17847v1 Baylor College of Medicine GCA_000178475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/475/GCF_000178475.1_ASM17847v1/ na assembly from type material na haploid bacteria 1540806 1540806 38.500000 0 73 73 NCBI RefSeq GCF_000178475.1-RS_2026_05_16 2026-05-16 1652 1438 61 na GCF_000178495.2 PRJNA224116 SAMN02469615 na na 228399 715 Actinobacillus pleuropneumoniae serovar 1 str. 4074 strain=4074 na latest Complete Genome Major Full 2018-05-02 ASM17849v2 Huazhong Agricultural University GCA_000178495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/495/GCF_000178495.2_ASM17849v2/ na assembly from type material na haploid bacteria 2318649 2318649 41.000000 1 1 1 NCBI RefSeq GCF_000178495.2-RS_2026_03_21 2026-03-21 2221 2087 85 20802045 GCF_000178515.1 PRJNA224116 SAMN02469622 ADOE00000000.1 na 871925 715 Actinobacillus pleuropneumoniae serovar 2 str. S1536 strain=S1536 na latest Contig Major Full 2010-09-13 ASM17851v1 Huazhong Agricultural University GCA_000178515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/515/GCF_000178515.1_ASM17851v1/ na na na haploid bacteria 2218721 2218721 41.000000 0 56 56 NCBI RefSeq GCF_000178515.1-RS_2025_08_18 2025-08-18 2120 2010 48 20802045 GCF_000178535.1 PRJNA224116 SAMN02469616 ADOF00000000.1 na 754255 715 Actinobacillus pleuropneumoniae serovar 4 str. M62 strain=M62 na latest Contig Major Full 2010-09-13 ASM17853v1 Huazhong Agricultural University GCA_000178535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/535/GCF_000178535.1_ASM17853v1/ na na na haploid bacteria 2271179 2271179 41.000000 0 89 89 NCBI RefSeq GCF_000178535.1-RS_2026_03_27 2026-03-27 2222 2096 45 20802045 GCF_000178555.1 PRJNA224116 SAMN02469617 ADOG00000000.1 na 754256 715 Actinobacillus pleuropneumoniae serovar 6 str. Femo strain=Femo na latest Contig Major Full 2010-09-13 ASM17855v1 Huazhong Agricultural University GCA_000178555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/555/GCF_000178555.1_ASM17855v1/ na na na haploid bacteria 2310958 2310958 41.000000 0 52 52 NCBI RefSeq GCF_000178555.1-RS_2026_03_27 2026-03-27 2244 2136 54 20802045 GCF_000178575.1 PRJNA224116 SAMN02469620 ADOI00000000.1 na 754258 715 Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261 strain=CVJ13261 na latest Contig Major Full 2010-09-13 ASM17857v1 Huazhong Agricultural University GCA_000178575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/575/GCF_000178575.1_ASM17857v1/ na na na haploid bacteria 2263394 2263394 41.000000 0 65 65 NCBI RefSeq GCF_000178575.1-RS_2026_01_13 2026-01-13 2201 2076 55 20802045 GCF_000178595.1 PRJNA224116 SAMN02469621 ADOJ00000000.1 na 754259 715 Actinobacillus pleuropneumoniae serovar 10 str. D13039 strain=D13039 na latest Contig Major Full 2010-09-13 ASM17859v1 Huazhong Agricultural University GCA_000178595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/595/GCF_000178595.1_ASM17859v1/ na na na haploid bacteria 2272088 2272088 41.000000 0 44 44 NCBI RefSeq GCF_000178595.1-RS_2026_03_03 2026-03-03 2171 2065 52 20802045 GCF_000178615.1 PRJNA224116 SAMN02469624 ADOK00000000.1 na 754260 715 Actinobacillus pleuropneumoniae serovar 11 str. 56153 strain=56153 na latest Contig Major Full 2010-09-13 ASM17861v1 Huazhong Agricultural University GCA_000178615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/615/GCF_000178615.1_ASM17861v1/ na na na haploid bacteria 2266623 2266623 41.000000 0 47 47 NCBI RefSeq GCF_000178615.1-RS_2025_09_14 2025-09-14 2191 2082 53 20802045 GCF_000178635.1 PRJNA224116 SAMN02469623 ADOL00000000.1 na 754261 715 Actinobacillus pleuropneumoniae serovar 12 str. 1096 strain=1096 na latest Contig Major Full 2010-09-13 ASM17863v1 Huazhong Agricultural University GCA_000178635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/635/GCF_000178635.1_ASM17863v1/ na na na haploid bacteria 2194146 2194146 41.000000 0 63 63 NCBI RefSeq GCF_000178635.1-RS_2026_03_27 2026-03-27 2106 1996 50 20802045 GCF_000178655.1 PRJNA224116 SAMN02469618 ADOM00000000.1 na 754262 715 Actinobacillus pleuropneumoniae serovar 13 str. N273 strain=N273 na latest Contig Major Full 2010-09-13 ASM17865v1 Huazhong Agricultural University GCA_000178655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/655/GCF_000178655.1_ASM17865v1/ na na na haploid bacteria 2250258 2250258 41.000000 0 68 68 NCBI RefSeq GCF_000178655.1-RS_2026_03_27 2026-03-27 2173 2071 58 20802045 GCF_000178675.2 PRJNA224116 SAMN02471721 ADUJ00000000.2 na 761194 761194 Pseudonocardia sp. P1 strain=P1 na latest Contig Major Full 2021-03-09 ASM17867v2 TGAC GCA_000178675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/675/GCF_000178675.2_ASM17867v2/ na na na haploid bacteria 6813557 6813557 73.500000 0 3 3 NCBI RefSeq GCF_000178675.2-RS_2025_08_27 2025-08-27 6316 6181 68 20796277 GCF_000178735.1 PRJNA224116 SAMN02470605 ADUZ00000000.1 na 702433 562 Escherichia coli O157:H7 str. EC4127 strain=EC4127 na latest Contig Major Full 2010-05-11 ASM17873v1 National Bioforensic Analysis Center GCA_000178735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/735/GCF_000178735.1_ASM17873v1/ na na na haploid bacteria 5296992 5296992 50.000000 0 791 791 NCBI RefSeq GCF_000178735.1-RS_2025_07_08 2025-07-08 5478 4842 80 na GCF_000178755.1 PRJNA224116 SAMN02470604 ADVA00000000.1 na 702434 562 Escherichia coli O157:H7 str. EC4191 strain=EC4191 na latest Contig Major Full 2010-05-10 ASM17875v1 National Bioforensic Analysis Center GCA_000178755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/755/GCF_000178755.1_ASM17875v1/ na na na haploid bacteria 5201104 5201104 50.000000 0 267 267 NCBI RefSeq GCF_000178755.1-RS_2025_06_14 2025-06-14 5248 4860 62 na GCF_000178795.1 PRJNA224116 SAMN02470599 ADVC00000000.1 na 702436 562 Escherichia coli O157:H7 str. EC536 strain=EC536 na latest Contig Major Full 2010-05-11 ASM17879v1 National Bioforensic Analysis Center GCA_000178795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/795/GCF_000178795.1_ASM17879v1/ na na na haploid bacteria 5262452 5262452 50.000000 0 678 678 NCBI RefSeq GCF_000178795.1-RS_2025_06_14 2025-06-14 5394 4825 88 na GCF_000178815.2 PRJNA224116 SAMN02441795 ADVE00000000.2 reference genome 595536 426 Methylosinus trichosporium OB3b strain=OB3b na latest Contig Major Full 2014-01-06 ASM17881v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/815/GCF_000178815.2_ASM17881v2/ na assembly from type material na haploid bacteria 4962262 4962262 66.000000 0 3 3 NCBI RefSeq GCF_000178815.2-RS_2026_04_23 2026-04-23 4595 4434 57 20952571 GCF_000178835.2 PRJNA224116 SAMN00013959 na reference genome 642492 29360 Cellulosilyticum lentocellum DSM 5427 strain=DSM 5427 na latest Complete Genome Major Full 2011-03-22 ASM17883v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/835/GCF_000178835.2_ASM17883v2/ na assembly from type material na haploid bacteria 4714237 4714237 34.500000 1 1 1 NCBI RefSeq GCF_000178835.2-RS_2025_12_13 2025-12-13 4392 4215 145 21398547 GCF_000178855.1 PRJNA224116 SAMN02441796 ADVG00000000.1 reference genome 485913 363277 Ktedonobacter racemifer DSM 44963 strain=SOSP1-21 na latest Scaffold Major Full 2010-06-04 ASM17885v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000178855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/855/GCF_000178855.1_ASM17885v1/ na assembly from type material na haploid bacteria 13661586 13661541 54.000000 0 10 12 NCBI RefSeq GCF_000178855.1-RS_2026_03_27 2026-03-27 12167 11356 88 22180814 GCF_000178875.2 PRJNA224116 SAMN00016780 na reference genome 693973 62322 Shewanella baltica OS678 strain=OS678 na latest Complete Genome Major Full 2010-12-21 ASM17887v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/875/GCF_000178875.2_ASM17887v2/ na na na haploid bacteria 5368767 5368767 46.500000 2 2 2 NCBI RefSeq GCF_000178875.2-RS_2025_09_05 2025-09-05 4659 4456 141 22328742 GCF_000178895.1 PRJNA224116 SAMN00001497 ADVK00000000.1 na 525283 851 Fusobacterium nucleatum subsp. nucleatum ATCC 23726 strain=ATCC 23726 na latest Contig Major Full 2010-05-17 ASM17889v1 BCM GCA_000178895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/895/GCF_000178895.1_ASM17889v1/ na na na haploid bacteria 2237034 2237034 27.000000 0 67 67 NCBI RefSeq GCF_000178895.1-RS_2025_12_07 2025-12-07 2146 2032 49 na GCF_000178935.2 PRJNA224116 SAMN02299423 na na 585535 210 Helicobacter pylori 35A strain=35A na latest Complete Genome Major Full 2010-12-29 ASM17893v2 Baylor College of Medicine GCA_000178935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/935/GCF_000178935.2_ASM17893v2/ na na na haploid bacteria 1566655 1566655 39.000000 1 1 1 NCBI RefSeq GCF_000178935.2-RS_2026_01_15 2026-01-15 1521 1388 45 na GCF_000178955.2 PRJNA224116 SAMN02232025 na reference genome 682795 940614 Granulicella mallensis MP5ACTX8 strain=MP5ACTX8 na latest Complete Genome Major Full 2011-12-01 ASM17895v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/955/GCF_000178955.2_ASM17895v2/ na assembly from type material na haploid bacteria 6237577 6237577 58.000000 1 1 1 NCBI RefSeq GCF_000178955.2-RS_2025_11_22 2025-11-22 4852 4779 54 na GCF_000178975.2 PRJNA224116 SAMN00013395 na reference genome 1198114 940615 Granulicella tundricola MP5ACTX9 strain=MP5ACTX9 na latest Complete Genome Major Full 2011-02-02 ASM17897v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000178975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/975/GCF_000178975.2_ASM17897v2/ na assembly from type material na haploid bacteria 5503984 5503984 60.000000 6 6 6 NCBI RefSeq GCF_000178975.2-RS_2025_12_13 2025-12-13 4744 4627 53 na GCF_000178995.1 PRJNA224116 SAMN02441808 ADVZ00000000.1 na 666684 666684 Afipia sp. 1NLS2 strain=1NLS2 na latest Contig Major Full 2010-06-18 ASM17899v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000178995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/178/995/GCF_000178995.1_ASM17899v1/ na na na haploid bacteria 3971756 3971756 61.500000 0 10 10 NCBI RefSeq GCF_000178995.1-RS_2024_06_14 2024-06-14 3877 3763 57 na GCF_000179015.2 PRJNA224116 SAMN00015356 na na 596153 179636 Alicycliphilus denitrificans BC strain=BC na latest Complete Genome Major Full 2011-01-07 ASM17901v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/015/GCF_000179015.2_ASM17901v2/ na na na haploid bacteria 4835713 4835713 68.000000 3 3 3 NCBI RefSeq GCF_000179015.2-RS_2026_03_27 2026-03-27 4728 4584 67 21742888 GCF_000179035.2 PRJNA224116 SAMN02603730 na reference genome 768700 57372 Mycoplasma suis str. Illinois strain=Illinois na latest Complete Genome Major Full 2011-02-18 ASM17903v2 Purdue University GCA_000179035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/035/GCF_000179035.2_ASM17903v2/ na assembly designated as reftype na haploid bacteria 742431 742431 31.000000 1 1 1 NCBI RefSeq GCF_000179035.2-RS_2025_12_13 2025-12-13 910 873 36 21317328 GCF_000179055.1 PRJNA224116 SAMN02436639 ADWO00000000.1 na 752555 305719 Segatella baroniae B14 strain=B14 na latest Contig Major Full 2010-06-28 ASM17905v1 JCVI GCA_000179055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/055/GCF_000179055.1_ASM17905v1/ na na na haploid bacteria 3592947 3592947 39.000000 0 98 98 NCBI RefSeq GCF_000179055.1-RS_2025_01_08 2025-01-08 2982 2765 122 20585943 GCF_000179075.1 PRJNA224116 SAMN00189188 ADWQ00000000.1 na 679202 562 Escherichia coli MS 85-1 strain=MS 85-1 na latest Contig Major Full 2010-06-30 ASM17907v1 WUGSC GCA_000179075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/075/GCF_000179075.1_ASM17907v1/ na na na haploid bacteria 5457657 5457657 50.500000 0 234 234 NCBI RefSeq GCF_000179075.1-RS_2025_06_13 2025-06-13 5595 5095 125 na GCF_000179095.1 PRJNA224116 SAMN00189186 ADWR00000000.1 na 796392 562 Escherichia coli MS 79-10 strain=MS 79-10 na latest Contig Major Full 2010-06-30 ASM17909v1 WUGSC GCA_000179095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/095/GCF_000179095.1_ASM17909v1/ na na na haploid bacteria 4900086 4900086 50.500000 0 157 157 NCBI RefSeq GCF_000179095.1-RS_2025_06_13 2025-06-13 4893 4453 107 na GCF_000179115.1 PRJNA224116 SAMN00189169 ADWS00000000.1 na 679204 562 Escherichia coli MS 145-7 strain=MS 145-7 na latest Contig Major Full 2010-06-30 ASM17911v1 WUGSC GCA_000179115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/115/GCF_000179115.1_ASM17911v1/ na na na haploid bacteria 5115051 5115051 51.000000 0 143 143 NCBI RefSeq GCF_000179115.1-RS_2025_06_13 2025-06-13 5195 4797 121 na GCF_000179135.1 PRJNA224116 SAMN00189168 ADWT00000000.1 na 679205 562 Escherichia coli MS 124-1 strain=MS 124-1 na latest Contig Major Full 2010-06-30 ASM17913v1 WUGSC GCA_000179135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/135/GCF_000179135.1_ASM17913v1/ na na na haploid bacteria 5394127 5394127 50.500000 0 176 176 NCBI RefSeq GCF_000179135.1-RS_2025_06_13 2025-06-13 5486 4985 102 na GCF_000179155.1 PRJNA224116 SAMN00189167 ADWU00000000.1 na 679206 562 Escherichia coli MS 119-7 strain=MS 119-7 na latest Contig Major Full 2010-06-30 ASM17915v1 WUGSC GCA_000179155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/155/GCF_000179155.1_ASM17915v1/ na na na haploid bacteria 4968686 4968686 50.500000 0 130 130 NCBI RefSeq GCF_000179155.1-RS_2025_06_13 2025-06-13 5029 4614 125 na GCF_000179175.1 PRJNA224116 SAMN00189162 ADWV00000000.1 na 679207 562 Escherichia coli MS 107-1 strain=MS 107-1 na latest Contig Major Full 2010-06-30 ASM17917v1 WUGSC GCA_000179175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/175/GCF_000179175.1_ASM17917v1/ na na na haploid bacteria 4905150 4905150 50.500000 0 72 72 NCBI RefSeq GCF_000179175.1-RS_2025_06_13 2025-06-13 4849 4501 112 na GCF_000179195.1 PRJNA224116 SAMN02441809 ADXA00000000.1 na 683219 683219 Streptomyces sp. SA3_actG strain=SA3_actG na latest Contig Major Full 2010-06-23 ASM17919v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000179195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/195/GCF_000179195.1_ASM17919v1/ na na na haploid bacteria 7443083 7443083 73.500000 0 254 254 NCBI RefSeq GCF_000179195.1-RS_2025_03_25 2025-03-25 6623 6319 69 na GCF_000179215.1 PRJNA224116 SAMN02441794 ADXB00000000.1 na 682181 682181 Streptomyces sp. SA3_actF strain=SA3_actF na latest Contig Major Full 2010-06-23 ASM17921v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000179215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/215/GCF_000179215.1_ASM17921v1/ na na na haploid bacteria 7217762 7217762 73.000000 0 1275 1275 NCBI RefSeq GCF_000179215.1-RS_2025_03_25 2025-03-25 6946 5894 71 na GCF_000179235.2 PRJNA224116 SAMN00010394 na na 232348 232348 Synechococcus sp. CB0101 strain=CB0101 na latest Complete Genome Major Full 2019-04-30 ASM17923v2 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000179235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/235/GCF_000179235.2_ASM17923v2/ na na na haploid bacteria 2789647 2789647 64.000000 1 1 1 NCBI RefSeq GCF_000179235.2-RS_2024_08_23 2024-08-23 3094 2995 60 na GCF_000179255.1 PRJNA224116 SAMN00010406 ADXM00000000.1 na 232363 232363 Synechococcus sp. CB0205 strain=CB0205 na latest Contig Major Full 2010-06-22 ASM17925v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000179255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/255/GCF_000179255.1_ASM17925v1/ na na na haploid bacteria 2427308 2427308 63.000000 0 78 78 NCBI RefSeq GCF_000179255.1-RS_2024_08_13 2024-08-13 2727 2615 50 na GCF_000179275.1 PRJNA224116 SAMN02469770 ADXN00000000.1 na 754254 715 Actinobacillus pleuropneumoniae serovar 2 str. 4226 strain=4226 na latest Contig Major Full 2010-08-12 ASM17927v1 Aarhus University, Denmark GCA_000179275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/275/GCF_000179275.1_ASM17927v1/ na na na haploid bacteria 2314315 2314315 41.000000 0 38 38 NCBI RefSeq GCF_000179275.1-RS_2026_03_20 2026-03-20 2231 2062 89 20802047 GCF_000179295.1 PRJNA224116 SAMN02469771 ADXO00000000.1 na 754256 715 Actinobacillus pleuropneumoniae serovar 6 str. Femo strain=Femo na latest Contig Major Full 2010-08-12 ASM17929v1 Aarhus University, Denmark GCA_000179295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/295/GCF_000179295.1_ASM17929v1/ na na na haploid bacteria 2375501 2375501 41.000000 0 36 36 NCBI RefSeq GCF_000179295.1-RS_2026_03_20 2026-03-20 2309 2163 83 20802047 GCF_000179335.1 PRJNA224116 SAMN00031762 AEAA00000000.1 na 768724 671216 Peptoniphilus sp. oral taxon 836 str. F0141 strain=F0141 na latest Contig Major Full 2010-07-14 ASM17933v1 J. Craig Venter Institute GCA_000179335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/335/GCF_000179335.1_ASM17933v1/ na na na haploid bacteria 1625156 1625156 30.500000 0 145 145 NCBI RefSeq GCF_000179335.1-RS_2024_08_13 2024-08-13 1678 1552 43 na GCF_000179375.1 PRJNA224116 SAMN00017036 AEAT00000000.1 na 784613 1584 Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 strain=PB2003/044-T3-4 na latest Contig Major Full 2010-07-13 ASM17937v1 J. Craig Venter Institute GCA_000179375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/375/GCF_000179375.1_ASM17937v1/ na na na haploid bacteria 1977342 1977342 50.000000 0 140 140 NCBI RefSeq GCF_000179375.1-RS_2026_02_16 2026-02-16 1990 1846 73 na GCF_000179395.2 PRJNA224116 SAMN02603088 na na 858619 1727 Corynebacterium variabile DSM 44702 strain=DSM 44702 na latest Complete Genome Major Full 2011-07-19 ASM17939v2 Center of Biotechnology, Bielefeld University GCA_000179395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/395/GCF_000179395.2_ASM17939v2/ na na na haploid bacteria 3433007 3433007 67.000000 1 1 1 NCBI RefSeq GCF_000179395.2-RS_2025_12_12 2025-12-12 3224 3027 79 22053731 GCF_000179435.1 PRJNA224116 SAMN02471903 AEAW00000000.1 na 863369 1598 Limosilactobacillus reuteri subsp. pararodentium strain=mlc3 na latest Contig Major Full 2010-07-13 ASM17943v1 Department of Food Science and Technology, Univ. Nebraska Lincoln GCA_000179435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/435/GCF_000179435.1_ASM17943v1/ na assembly from type material na haploid bacteria 2018630 2018630 38.500000 0 126 126 NCBI RefSeq GCF_000179435.1-RS_2026_04_23 2026-04-23 2040 1891 81 21379339 GCF_000179455.1 PRJNA224116 SAMN02471904 AEAX00000000.1 na 863368 1598 Limosilactobacillus reuteri subsp. murium strain=lpuph1 na latest Contig Major Full 2010-07-13 ASM17945v1 Department of Food Science and Technology, Univ. Nebraska Lincoln GCA_000179455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/455/GCF_000179455.1_ASM17945v1/ na assembly from type material na haploid bacteria 2116621 2116621 38.500000 0 127 127 NCBI RefSeq GCF_000179455.1-RS_2026_04_21 2026-04-21 2115 1997 86 21379339 GCF_000179475.1 PRJNA224116 SAMN00017035 AEBA00000000.1 na 768728 1624 Ligilactobacillus salivarius ACS-116-V-Col5a strain=ACS-116-V-Col5a na latest Contig Major Full 2010-07-19 ASM17947v1 J. Craig Venter Institute GCA_000179475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/475/GCF_000179475.1_ASM17947v1/ na na na haploid bacteria 2044602 2044602 32.500000 0 154 154 NCBI RefSeq GCF_000179475.1-RS_2026_04_23 2026-04-23 2137 1972 61 na GCF_000179495.1 PRJNA224116 SAMN00100752 AECM00000000.1 na 768713 1260 Finegoldia magna ACS-171-V-Col3 strain=ACS-171-V-Col3 na latest Contig Major Full 2010-08-05 ASM17949v1 J. Craig Venter Institute GCA_000179495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/495/GCF_000179495.1_ASM17949v1/ na na na haploid bacteria 1828755 1828755 32.000000 0 30 30 NCBI RefSeq GCF_000179495.1-RS_2025_08_25 2025-08-25 1788 1703 52 na GCF_000179515.1 PRJNA224116 SAMN02469819 AECN00000000.1 na 869728 57975 Burkholderia thailandensis E555 strain=E555 na latest Contig Major Full 2010-08-16 BTHE555_1.0 Genome Institute of Singapore GCA_000179515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/515/GCF_000179515.1_BTHE555_1.0/ na na na haploid bacteria 6145909 6145909 67.500000 0 521 521 NCBI RefSeq GCF_000179515.1-RS_2025_08_18 2025-08-18 5818 5484 61 20799932 GCF_000179535.2 PRJNA224116 SAMN02256524 AECY00000000.2 na 693971 62322 Shewanella baltica OS183 strain=OS183 na latest Chromosome Major Full 2012-01-24 ASM17953v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/535/GCF_000179535.2_ASM17953v2/ na na na haploid bacteria 5049928 5049228 46.000000 1 1 8 NCBI RefSeq GCF_000179535.2-RS_2026_03_20 2026-03-20 4377 4206 124 22328742 GCF_000179555.1 PRJNA224116 SAMN00103625 AECZ00000000.1 reference genome 596151 878 Solidesulfovibrio fructosivorans JJ] strain=JJ na latest Contig Major Full 2010-08-10 ASM17955v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000179555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/555/GCF_000179555.1_ASM17955v1/ na assembly from type material na haploid bacteria 4673595 4673595 64.000000 0 75 75 NCBI RefSeq GCF_000179555.1-RS_2025_12_11 2025-12-11 4285 4187 56 na GCF_000179575.2 PRJNA224116 SAMN00100784 na reference genome 647113 155863 Methanothermococcus okinawensis IH1 strain=IH1 na latest Complete Genome Major Full 2011-06-06 ASM17957v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/575/GCF_000179575.2_ASM17957v2/ na assembly from type material na haploid archaea 1677455 1677455 29.500000 2 2 2 NCBI RefSeq GCF_000179575.2-RS_2025_11_20 2025-11-20 1699 1625 47 na GCF_000179595.2 PRJNA224116 SAMN02256541 AEDB00000000.2 reference genome 509191 35830 Acetivibrio cellulolyticus CD2 strain=CD2 na latest Scaffold Major Full 2012-11-07 ASM17959v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/595/GCF_000179595.2_ASM17959v2/ na assembly from type material na haploid bacteria 6156735 6146515 35.500000 0 10 114 NCBI RefSeq GCF_000179595.2-RS_2025_12_09 2025-12-09 5157 5002 74 na GCF_000179615.1 PRJNA224116 SAMN00015377 AEDD00000000.1 reference genome 717606 59840 Paenibacillus curdlanolyticus YK9 strain=YK9 na latest Scaffold Major Full 2010-08-20 ASM17961v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000179615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/615/GCF_000179615.1_ASM17961v1/ na assembly from type material na haploid bacteria 5452778 5452618 52.000000 0 40 52 NCBI RefSeq GCF_000179615.1-RS_2025_12_09 2025-12-09 4908 4705 147 na GCF_000179635.2 PRJNA224116 SAMN00016988 na reference genome 697329 1264 Hominimerdicola alba 7 = DSM 20455 strain=7 na latest Complete Genome Major Full 2010-12-23 ASM17963v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/635/GCF_000179635.2_ASM17963v2/ na assembly from type material na haploid bacteria 4482087 4482087 43.500000 5 5 5 NCBI RefSeq GCF_000179635.2-RS_2026_03_12 2026-03-12 4138 3998 90 21914885 GCF_000179655.1 PRJNA224116 SAMN00016812 AEDL00000000.1 na 517433 517433 Pantoea sp. aB strain=aB na latest Contig Major Full 2010-08-20 ASM17965v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000179655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/655/GCF_000179655.1_ASM17965v1/ na na na haploid bacteria 4805313 4805313 54.500000 0 33 33 NCBI RefSeq GCF_000179655.1-RS_2024_08_12 2024-08-12 4536 4381 81 na GCF_000179675.1 PRJNA224116 SAMN00100749 AEDO00000000.1 na 866771 28130 Prevotella disiens FB035-09AN strain=FB035-09AN na latest Contig Major Full 2010-08-10 ASM17967v1 J. Craig Venter Institute GCA_000179675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/675/GCF_000179675.1_ASM17967v1/ na na na haploid bacteria 3003828 3003828 40.000000 0 78 78 NCBI RefSeq GCF_000179675.1-RS_2025_12_04 2025-12-04 2647 2446 71 na GCF_000179695.1 PRJNA224116 SAMN00100737 AEDP00000000.1 na 866773 1260 Finegoldia magna BVS033A4 strain=BVS033A4 na latest Contig Major Full 2010-08-10 ASM17969v1 J. Craig Venter Institute GCA_000179695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/695/GCF_000179695.1_ASM17969v1/ na na na haploid bacteria 1995204 1995204 31.500000 0 50 50 NCBI RefSeq GCF_000179695.1-RS_2025_08_25 2025-08-25 1952 1872 42 na GCF_000179715.1 PRJNA224116 SAMN00100753 AEDQ00000000.1 na 866774 82135 Fannyhessea vaginae PB189-T1-4 strain=PB189-T1-4 na latest Contig Major Full 2010-08-10 ASM17971v1 J. Craig Venter Institute GCA_000179715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/715/GCF_000179715.1_ASM17971v1/ na na na haploid bacteria 1449613 1449613 48.500000 0 34 34 NCBI RefSeq GCF_000179715.1-RS_2025_01_12 2025-01-12 1159 1100 52 na GCF_000179735.1 PRJNA224116 SAMN00100757 AEDR00000000.1 na 866776 39777 Veillonella atypica ACS-049-V-Sch6 strain=ACS-049-V-Sch6 na latest Contig Major Full 2010-08-10 ASM17973v1 J. Craig Venter Institute GCA_000179735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/735/GCF_000179735.1_ASM17973v1/ na na na haploid bacteria 2053871 2053871 39.000000 0 63 63 NCBI RefSeq GCF_000179735.1-RS_2026_02_16 2026-02-16 1903 1828 62 na GCF_000179755.1 PRJNA224116 SAMN00100747 AEDS00000000.1 na 866778 39777 Veillonella atypica ACS-134-V-Col7a strain=ACS-134-V-Col7a na latest Contig Major Full 2010-08-10 ASM17975v1 J. Craig Venter Institute GCA_000179755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/755/GCF_000179755.1_ASM17975v1/ na na na haploid bacteria 2151913 2151913 39.000000 0 70 70 NCBI RefSeq GCF_000179755.1-RS_2026_02_16 2026-02-16 1971 1892 56 na GCF_000179775.1 PRJNA224116 SAMN00010388 AEEB00000000.1 na 744979 744979 Ahrensia sp. R2A130 strain=R2A130 na latest Contig Major Full 2010-08-16 ASM17977v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000179775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/775/GCF_000179775.1_ASM17977v1/ na na na haploid bacteria 3731054 3731054 57.000000 0 59 59 NCBI RefSeq GCF_000179775.1-RS_2024_08_22 2024-08-22 3453 3378 46 na GCF_000179795.1 PRJNA224116 SAMN02428923 AEFA00000000.1 na 753642 562 Escherichia coli NC101 strain=NC101 na latest Contig Major Full 2010-09-02 ASM17979v1 Cornell University GCA_000179795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/795/GCF_000179795.1_ASM17979v1/ na na na haploid bacteria 5021144 5021144 50.500000 0 27 27 NCBI RefSeq GCF_000179795.1-RS_2025_06_13 2025-06-13 4859 4599 81 na GCF_000179875.1 PRJNA224116 SAMN02470199 AEGQ00000000.1 na 886872 1246 Leuconostoc lactis KCTC 3773 strain=KCTC 3773 na latest Contig Major Full 2010-09-23 ASM17987v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000179875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/875/GCF_000179875.1_ASM17987v1/ na assembly from heterotypic synonym type material na haploid bacteria 1720683 1720683 43.000000 0 98 98 NCBI RefSeq GCF_000179875.1-RS_2026_01_15 2026-01-15 1823 1701 52 20952569 GCF_000179915.2 PRJNA224116 SAMN00100755 na reference genome 401053 870903 Terriglobus saanensis SP1PR4 strain=SP1PR4 na latest Complete Genome Major Full 2011-01-24 ASM17991v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000179915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/915/GCF_000179915.2_ASM17991v2/ na assembly from type material na haploid bacteria 5095226 5095226 57.500000 1 1 1 NCBI RefSeq GCF_000179915.2-RS_2026_05_01 2026-05-01 4269 4192 52 23450133 GCF_000179935.1 PRJNA224116 SAMN00115039 AEKH00000000.1 na 879301 147802 Lactobacillus iners LEAF 2053A-b strain=LEAF 2053A-b na latest Contig Major Full 2010-11-04 ASM17993v1 J. Craig Venter Institute GCA_000179935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/935/GCF_000179935.1_ASM17993v1/ na na na haploid bacteria 1368717 1368717 32.500000 0 37 37 NCBI RefSeq GCF_000179935.1-RS_2026_02_16 2026-02-16 1340 1254 57 na GCF_000179955.1 PRJNA224116 SAMN00115041 AEKI00000000.1 na 879302 147802 Lactobacillus iners LEAF 2052A-d strain=LEAF 2052A-d na latest Contig Major Full 2010-11-04 ASM17995v1 J. Craig Venter Institute GCA_000179955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/955/GCF_000179955.1_ASM17995v1/ na na na haploid bacteria 1322320 1322320 32.500000 0 28 28 NCBI RefSeq GCF_000179955.1-RS_2026_02_16 2026-02-16 1320 1238 57 na GCF_000179975.1 PRJNA224116 SAMN00115042 AEKJ00000000.1 na 879303 147802 Lactobacillus iners LEAF 2062A-h1 strain=LEAF 2062A-h1 na latest Contig Major Full 2010-11-04 ASM17997v1 J. Craig Venter Institute GCA_000179975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/975/GCF_000179975.1_ASM17997v1/ na na na haploid bacteria 1303868 1303868 32.500000 0 24 24 NCBI RefSeq GCF_000179975.1-RS_2026_02_16 2026-02-16 1306 1213 56 na GCF_000179995.1 PRJNA224116 SAMN00115043 AEKK00000000.1 na 879304 147802 Lactobacillus iners LEAF 3008A-a strain=LEAF 3008A-a na latest Contig Major Full 2010-11-04 ASM17999v1 J. Craig Venter Institute GCA_000179995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/179/995/GCF_000179995.1_ASM17999v1/ na na na haploid bacteria 1273041 1273041 32.500000 0 25 25 NCBI RefSeq GCF_000179995.1-RS_2026_02_16 2026-02-16 1266 1161 56 na GCF_000180015.1 PRJNA224116 SAMN00116776 AEKL00000000.1 na 908339 1632 Limosilactobacillus oris PB013-T2-3 strain=PB013-T2-3 na latest Contig Major Full 2010-11-04 ASM18001v1 J. Craig Venter Institute GCA_000180015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/015/GCF_000180015.1_ASM18001v1/ na na na haploid bacteria 2115990 2115990 50.000000 0 89 89 NCBI RefSeq GCF_000180015.1-RS_2025_12_05 2025-12-05 2096 1989 65 na GCF_000180055.1 PRJNA224116 SAMN00115114 AEKN00000000.1 na 904293 1317 Streptococcus downei F0415 strain=F0415 na latest Contig Major Full 2010-11-04 ASM18005v1 J. Craig Venter Institute GCA_000180055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/055/GCF_000180055.1_ASM18005v1/ na na na haploid bacteria 2239421 2239421 43.500000 0 17 17 NCBI RefSeq GCF_000180055.1-RS_2026_03_31 2026-03-31 2166 1930 80 na GCF_000180095.1 PRJNA224116 SAMD00036539 BABM00000000.1 na 585891 1280 Staphylococcus aureus subsp. aureus Mu50-omega strain=Mu50-omega na latest Contig Major Full 2009-01-12 ASM18009v1 Juntendo University GCA_000180095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/095/GCF_000180095.1_ASM18009v1/ na na na haploid bacteria 2878428 2878428 33.000000 0 1 1 NCBI RefSeq GCF_000180095.1-RS_2025_08_19 2025-08-19 2885 2730 79 19124662 GCF_000180155.1 PRJNA224116 SAMD00036544 BABV00000000.1 na 871541 544580 Actinomyces oris K20 strain=K20 na latest Contig Major Full 2010-08-31 ASM18015v1 Osaka Dental University GCA_000180155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/155/GCF_000180155.1_ASM18015v1/ na na na haploid bacteria 2872429 2872429 68.000000 0 771 771 NCBI RefSeq GCF_000180155.1-RS_2025_08_19 2025-08-19 2909 2538 56 22900599 GCF_000180455.1 PRJNA224116 SAMEA2272769 CACA00000000.1 na 272129 272129 Kamptonema sp. PCC 6506 strain=PCC 6506 na latest Contig Major Full 2010-07-08 ASM18045v1 ENSCP, Biochemistry, Paris, France GCA_000180455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/455/GCF_000180455.1_ASM18045v1/ na na na haploid bacteria 6676705 6676705 43.500000 0 377 377 NCBI RefSeq GCF_000180455.1-RS_2025_03_25 2025-03-25 5853 5639 80 20675499 GCF_000180475.1 PRJNA224116 SAMEA3138304 CACE00000000.1 na 869310 1313 Streptococcus pneumoniae SPN1041 strain=SPN1041 na latest Contig Major Full 2010-08-04 ASM18047v1 Wellcome Trust Sanger Institute GCA_000180475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/475/GCF_000180475.1_ASM18047v1/ na na na haploid bacteria 2097342 2097342 39.500000 0 52 52 NCBI RefSeq GCF_000180475.1-RS_2026_02_01 2026-02-01 2227 1953 63 na GCF_000180495.1 PRJNA224116 SAMEA3138305 CACF00000000.1 na 869313 1313 Streptococcus pneumoniae SPN7465 strain=SPN7465 na latest Contig Major Full 2010-08-04 ASM18049v1 Wellcome Trust Sanger Institute GCA_000180495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/495/GCF_000180495.1_ASM18049v1/ na na na haploid bacteria 2084938 2084938 39.500000 0 26 26 NCBI RefSeq GCF_000180495.1-RS_2026_01_03 2026-01-03 2177 1924 66 na GCF_000180535.1 PRJNA224116 SAMEA3138307 CACH00000000.1 na 869308 1313 Streptococcus pneumoniae SPN021198 strain=SPN021198 na latest Contig Major Full 2010-08-04 ASM18053v1 Wellcome Trust Sanger Institute GCA_000180535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/535/GCF_000180535.1_ASM18053v1/ na na na haploid bacteria 2050133 2050133 40.000000 0 22 22 NCBI RefSeq GCF_000180535.1-RS_2026_06_15 2026-06-15 2183 1887 121 24130509 GCF_000180555.1 PRJNA224116 SAMEA3138308 CACI00000000.1 na 869305 1313 Streptococcus pneumoniae SPN072838 strain=SPN072838 na latest Scaffold Major Full 2010-08-04 ASM18055v1 Wellcome Trust Sanger Institute GCA_000180555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/555/GCF_000180555.1_ASM18055v1/ na na na haploid bacteria 2057037 2056816 40.000000 0 25 39 NCBI RefSeq GCF_000180555.1-RS_2025_04_24 2025-04-24 2123 1882 66 24130509 GCF_000180595.1 PRJNA224116 SAMEA2272069 CACL00000000.1 na 869214 486 Neisseria lactamica Y92-1009 strain=Y92-1009 na latest Contig Major Full 2010-10-20 ASM18059v1 Health Protection Agency, Porton Down GCA_000180595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/180/595/GCF_000180595.1_ASM18059v1/ na na na haploid bacteria 2023964 2023964 52.500000 0 44 44 NCBI RefSeq GCF_000180595.1-RS_2026_01_30 2026-01-30 2082 1868 57 na GCF_000181455.2 PRJNA224116 SAMN02403940 ABCD00000000.1 na 412420 632 Yersinia pestis CA88-4125 strain=CA88-4125 na latest Scaffold Major Full 2007-06-21 ASM18145v2 ERIC GCA_000181455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/455/GCF_000181455.2_ASM18145v2/ na na na haploid bacteria 4825390 4825390 47.500000 3 10 10 NCBI RefSeq GCF_000181455.2-RS_2026_04_17 2026-04-17 4420 4102 98 na GCF_000181475.1 PRJNA224116 SAMN02436120 ABCE00000000.1 na 344747 122 Gimesia maris DSM 8797 strain=DSM 8797 na latest Contig Major Full 2007-06-15 ASM18147v1 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000181475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/475/GCF_000181475.1_ASM18147v1/ na assembly from type material na haploid bacteria 7777997 7777997 50.500000 0 125 125 NCBI RefSeq GCF_000181475.1-RS_2025_08_03 2025-08-03 5964 5830 70 na GCF_000181495.1 PRJNA224116 SAMN02436121 ABCF00000000.1 na 161544 161544 Bacillus sp. SG-1 strain=SG-1 na latest Contig Major Full 2007-06-15 ASM18149v1 J. Craig Venter Institute GCA_000181495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/495/GCF_000181495.1_ASM18149v1/ na na na haploid bacteria 3948965 3948965 42.000000 0 186 186 NCBI RefSeq GCF_000181495.1-RS_2025_08_25 2025-08-25 4006 3811 97 na GCF_000181515.1 PRJNA224116 SAMN02436098 ABCG00000000.1 na 161528 161528 Erythrobacter sp. SD-21 strain=SD-21 na latest Contig Major Full 2007-06-14 ASM18151v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000181515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/515/GCF_000181515.1_ASM18151v1/ na na na haploid bacteria 2970874 2970874 63.000000 0 19 19 NCBI RefSeq GCF_000181515.1-RS_2024_08_13 2024-08-13 2953 2875 52 na GCF_000181535.1 PRJNA224116 SAMN02436099 ABCH00000000.1 na 391591 689 Vibrio mediterranei AK1 strain=AK1 na latest Contig Major Full 2007-06-14 ASM18153v1 The Gordon and Betty Moore Foundation Microbial Genome Sequencing project GCA_000181535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/535/GCF_000181535.1_ASM18153v1/ na assembly from heterotypic synonym type material na haploid bacteria 5701826 5701826 44.000000 0 158 158 NCBI RefSeq GCF_000181535.1-RS_2026_04_15 2026-04-15 5325 5125 80 na GCF_000181555.2 PRJNA224116 SAMN02436325 ABCV00000000.2 na 445983 139 Borreliella burgdorferi 156a strain=156a na latest Scaffold Major Full 2009-01-07 ASM18155v2 J. Craig Venter Institute GCA_000181555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/555/GCF_000181555.2_ASM18155v2/ na na na haploid bacteria 1469834 1469834 28.000000 20 32 32 NCBI RefSeq GCF_000181555.2-RS_2026_04_19 2026-04-19 1493 1404 41 20935092 GCF_000181575.2 PRJNA224116 SAMN02436166 ABCW00000000.2 na 445984 139 Borreliella burgdorferi Bol26 strain=Bol26 na latest Scaffold Major Full 2009-04-01 ASM18157v2 J. Craig Venter Institute GCA_000181575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/575/GCF_000181575.2_ASM18157v2/ na na na haploid bacteria 1321434 1321434 28.500000 15 20 20 NCBI RefSeq GCF_000181575.2-RS_2026_04_04 2026-04-04 1359 1287 38 20935092 GCF_000181615.1 PRJNA224116 SAMN02436322 ABDA00000000.2 na 405533 1396 Bacillus cereus AH1134 strain=AH1134 na latest Scaffold Major Full 2008-09-26 ASM18161v1 TIGR GCA_000181615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/615/GCF_000181615.1_ASM18161v1/ na na na haploid bacteria 5908750 5908750 35.000000 2 37 37 NCBI RefSeq GCF_000181615.1-RS_2026_06_30 2026-06-30 6071 5628 160 na GCF_000181675.2 PRJNA224116 SAMN02436236 ABDN00000000.2 na 405536 1392 Bacillus anthracis str. Tsiankovskii-I strain=Tsiankovskii-I na latest Scaffold Major Full 2008-06-16 ASM18167v2 J. Craig Venter Institute GCA_000181675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/675/GCF_000181675.2_ASM18167v2/ na na na haploid bacteria 5504728 5504728 35.000000 2 56 56 NCBI RefSeq GCF_000181675.2-RS_2026_04_30 2026-04-30 5787 5237 130 na GCF_000181695.2 PRJNA27973 SAMN02953680 AAYY00000000.1 reference genome 425265 76773 Malassezia globosa CBS 7966 strain=CBS 7966 na latest Contig Minor Full 2007-11-02 ASM18169v2 The Procter & Gamble Company GCA_000181695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/695/GCF_000181695.2_ASM18169v2/ na assembly from type material na haploid fungi 8954998 8954998 52.000000 0 62 62 The Procter & Gamble Company Annotation submitted by The Procter & Gamble Company 2023-12-27 4278 4278 0 18000048 GCF_000181715.2 PRJNA224116 SAMN02436324 ABGK00000000.2 na 476212 139 Borreliella burgdorferi 94a strain=94a na latest Scaffold Major Full 2009-03-23 ASM18171v2 J. Craig Venter Institute GCA_000181715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/715/GCF_000181715.2_ASM18171v2/ na na na haploid bacteria 1295451 1295451 28.500000 14 25 25 NCBI RefSeq GCF_000181715.2-RS_2026_04_04 2026-04-04 1311 1225 39 20935092 GCF_000181755.1 PRJNA224116 SAMN02436319 ABHL00000000.2 na 444448 562 Escherichia coli O157:H7 str. EC4045 strain=EC4045 na latest Scaffold Major Full 2008-10-06 ASM18175v1 J. Craig Venter Institute GCA_000181755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/755/GCF_000181755.1_ASM18175v1/ na na na haploid bacteria 5634850 5634850 50.500000 1 8 8 NCBI RefSeq GCF_000181755.1-RS_2025_06_13 2025-06-13 5709 5232 137 na GCF_000181775.1 PRJNA224116 SAMN02436173 ABHM00000000.2 na 444449 562 Escherichia coli O157:H7 str. EC4042 strain=EC4042 na latest Scaffold Major Full 2008-10-06 ASM18177v1 J. Craig Venter Institute GCA_000181775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/775/GCF_000181775.1_ASM18177v1/ na na na haploid bacteria 5617728 5617728 50.500000 1 4 4 NCBI RefSeq GCF_000181775.1-RS_2025_06_13 2025-06-13 5679 5108 137 na GCF_000181835.1 PRJNA224116 SAMN02470254 ABJC00000000.1 na 486624 1392 Bacillus anthracis str. A0488 strain=A0488 A latest Scaffold Major Full 2008-02-14 ASM18183v1 Los Alamos National Laboratory GCA_000181835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/835/GCF_000181835.1_ASM18183v1/ na assembly from type material na haploid bacteria 5392168 5392168 35.000000 2 63 63 NCBI RefSeq GCF_000181835.1-RS_2026_04_30 2026-04-30 5672 5150 122 na GCF_000181855.2 PRJNA224116 SAMN02436285 ABJW00000000.2 na 498737 139 Borreliella burgdorferi WI91-23 strain=WI91-23 na latest Scaffold Major Full 2009-03-05 ASM18185v2 J. Craig Venter Institute GCA_000181855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/855/GCF_000181855.2_ASM18185v2/ na na na haploid bacteria 1427907 1427907 28.500000 21 54 54 NCBI RefSeq GCF_000181855.2-RS_2026_03_02 2026-03-02 1478 1339 39 20935092 GCF_000181875.2 PRJNA224116 SAMN02436286 ABJZ00000000.2 na 498741 498741 [Borrelia] finlandensis strain=SV1 na latest Scaffold Major Full 2009-03-23 ASM18187v2 J. Craig Venter Institute GCA_000181875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/875/GCF_000181875.2_ASM18187v2/ na assembly from type material na haploid bacteria 1281782 1281782 28.500000 10 16 16 NCBI RefSeq GCF_000181875.2-RS_2026_05_01 2026-05-01 1311 1173 38 21217002 GCF_000181895.2 PRJNA224116 SAMN02436233 ABKB00000000.2 na 498742 88916 Borreliella spielmanii A14S strain=A14S na latest Scaffold Major Full 2009-03-04 ASM18189v2 J. Craig Venter Institute GCA_000181895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/895/GCF_000181895.2_ASM18189v2/ na na na haploid bacteria 1252559 1252559 27.500000 13 49 49 NCBI RefSeq GCF_000181895.2-RS_2026_04_04 2026-04-04 1257 1161 42 22207749 GCF_000181915.1 PRJNA224116 SAMN02470282 ABKF00000000.1 na 486619 1392 Bacillus anthracis str. A0193 strain=A0193 na latest Scaffold Major Full 2008-02-08 ASM18191v1 Los Alamos National Laboratory GCA_000181915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/915/GCF_000181915.1_ASM18191v1/ na na na haploid bacteria 5392880 5392880 35.000000 2 60 60 NCBI RefSeq GCF_000181915.1-RS_2026_04_30 2026-04-30 5665 5166 114 na GCF_000181935.1 PRJNA224116 SAMN02470279 ABKG00000000.1 na 486621 1392 Bacillus anthracis str. A0442 strain=A0442 na latest Scaffold Major Full 2008-02-08 ASM18193v1 Los Alamos National Laboratory GCA_000181935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/935/GCF_000181935.1_ASM18193v1/ na na na haploid bacteria 5374836 5374836 35.000000 2 46 46 NCBI RefSeq GCF_000181935.1-RS_2026_04_30 2026-04-30 5664 5118 130 na GCF_000181975.1 PRJNA224116 SAMN00000046 ABLC00000000.1 na 396596 152480 Burkholderia ambifaria IOP40-10 strain=IOP40-10 na latest Contig Major Full 2008-03-17 ASM18197v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000181975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/975/GCF_000181975.1_ASM18197v1/ na na na haploid bacteria 7689995 7689995 66.500000 0 629 629 NCBI RefSeq GCF_000181975.1-RS_2026_02_16 2026-02-16 7313 6948 59 na GCF_000181995.1 PRJNA224116 SAMN02470255 ABLH00000000.1 na 486620 1392 Bacillus anthracis str. A0465 strain=A0465 na latest Scaffold Major Full 2008-03-21 ASM18199v1 Los Alamos National Laboratory GCA_000181995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/181/995/GCF_000181995.1_ASM18199v1/ na na na haploid bacteria 5407149 5407149 35.000000 2 57 57 NCBI RefSeq GCF_000181995.1-RS_2026_04_30 2026-04-30 5707 5176 126 na GCF_000182015.1 PRJNA224116 SAMN00000044 ABLK00000000.1 na 396597 152480 Burkholderia ambifaria MEX-5 strain=MEX-5 na latest Contig Major Full 2008-03-27 ASM18201v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000182015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/015/GCF_000182015.1_ASM18201v1/ na na na haploid bacteria 7855467 7855467 66.000000 0 706 706 NCBI RefSeq GCF_000182015.1-RS_2026_02_16 2026-02-16 7588 6999 61 na GCF_000182055.1 PRJNA224116 SAMN02470265 ABLT00000000.1 na 486622 1392 Bacillus anthracis str. A0174 strain=A0174 na latest Scaffold Major Full 2008-04-04 ASM18205v1 Los Alamos National Laboratory GCA_000182055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/055/GCF_000182055.1_ASM18205v1/ na na na haploid bacteria 5291908 5291908 35.000000 1 60 60 NCBI RefSeq GCF_000182055.1-RS_2026_04_30 2026-04-30 5586 5102 113 na GCF_000182195.1 PRJNA224116 SAMN02470264 ACCE00000000.1 na 557724 28450 Burkholderia pseudomallei 576 strain=576 na latest Contig Major Full 2008-12-12 ASM18219v1 Los Alamos National Laboratory GCA_000182195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/195/GCF_000182195.1_ASM18219v1/ na na na haploid bacteria 7246736 7246736 68.000000 0 21 21 NCBI RefSeq GCF_000182195.1-RS_2026_02_16 2026-02-16 6457 6206 64 na GCF_000182235.1 PRJNA224116 SAMN02595294 ACEM00000000.1 na 520465 29459 Brucella melitensis bv. 2 str. 63/9 strain=63/9 na latest Contig Major Full 2009-02-18 ASM18223v1 Broad Institute GCA_000182235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/235/GCF_000182235.1_ASM18223v1/ na na na haploid bacteria 3284951 3284951 57.000000 0 60 60 NCBI RefSeq GCF_000182235.1-RS_2026_04_26 2026-04-26 3231 3010 59 na GCF_000182255.1 PRJNA224116 SAMN02436263 ACFB00000000.1 na 513051 87883 Burkholderia multivorans CGD1 strain=CGD1 na latest Contig Major Full 2009-01-22 JCVI-gbv1-v1.0 J. Craig Venter Institute GCA_000182255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/255/GCF_000182255.1_JCVI-gbv1-v1.0/ na na na haploid bacteria 6621721 6621721 67.000000 0 34 34 NCBI RefSeq GCF_000182255.1-RS_2026_02_06 2026-02-06 6043 5830 83 23105085 GCF_000182275.1 PRJNA224116 SAMN02436264 ACFC00000000.1 na 513052 87883 Burkholderia multivorans CGD2 strain=CGD2 na latest Contig Major Full 2009-01-22 JCVI-gbv2-v1.0 The J. Craig Venter Institute GCA_000182275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/275/GCF_000182275.1_JCVI-gbv2-v1.0/ na na na haploid bacteria 6554147 6554147 67.000000 0 37 37 NCBI RefSeq GCF_000182275.1-RS_2026_02_06 2026-02-06 6050 5854 86 23105085 GCF_000182295.1 PRJNA224116 SAMN00000359 ACFD00000000.1 na 513053 87883 Burkholderia multivorans CGD2M strain=CGD2M na latest Contig Major Full 2009-01-22 JCVI-gbv2-v1.0 The J. Craig Venter Institute GCA_000182295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/295/GCF_000182295.1_JCVI-gbv2-v1.0/ na na na haploid bacteria 6564368 6564368 67.000000 0 27 27 NCBI RefSeq GCF_000182295.1-RS_2026_02_06 2026-02-06 6052 5856 89 na GCF_000182385.1 PRJNA224116 SAMN02436265 ACFO00000000.1 na 563773 670 Vibrio parahaemolyticus AN-5034 strain=AN-5034 na latest Contig Major Full 2009-02-03 ASM18238v1 J Craig Venter Institute GCA_000182385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/385/GCF_000182385.1_ASM18238v1/ na na na haploid bacteria 5199902 5199902 45.500000 0 54 54 NCBI RefSeq GCF_000182385.1-RS_2026_01_12 2026-01-12 4779 4561 144 21645368 GCF_000182445.1 PRJNA224116 SAMN02470278 ACKA00000000.1 na 595498 28450 Burkholderia pseudomallei Pakistan 9 strain=Pakistan 9 na latest Contig Major Full 2009-03-31 ASM18244v1 Los Alamos National Laboratory GCA_000182445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/445/GCF_000182445.1_ASM18244v1/ na na na haploid bacteria 7147705 7147705 68.000000 0 71 71 NCBI RefSeq GCF_000182445.1-RS_2026_02_16 2026-02-16 6442 6138 69 na GCF_000182485.1 PRJNA224116 SAMN02403941 ACNQ00000000.1 na 377628 632 Yersinia pestis Nepal516 strain=Nepal516 A latest Scaffold Major Full 2009-05-08 ASM18248v1 ERIC (Enteropathogen Resource Integration Center) GCA_000182485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/485/GCF_000182485.1_ASM18248v1/ na na na haploid bacteria 4629080 4628826 47.500000 2 23 31 NCBI RefSeq GCF_000182485.1-RS_2025_08_07 2025-08-07 4232 3919 101 na GCF_000182505.1 PRJNA224116 SAMN02403942 ACNR00000000.1 na 547047 632 Yersinia pestis biovar Orientalis str. India 195 strain=India 195 na latest Scaffold Major Full 2009-05-08 ASM18250v1 ERIC (Enteropathogen Resource Integration Center) GCA_000182505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/505/GCF_000182505.1_ASM18250v1/ na na na haploid bacteria 4719608 4719328 47.500000 3 33 41 NCBI RefSeq GCF_000182505.1-RS_2025_08_07 2025-08-07 4356 4022 98 na GCF_000182525.1 PRJNA224116 SAMN02403943 ACNS00000000.1 na 547046 632 Yersinia pestis biovar Orientalis str. PEXU2 strain=PEXU2 na latest Scaffold Major Full 2009-05-08 ASM18252v1 Enteropathogen Resource Integration Center (ERIC) GCA_000182525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/525/GCF_000182525.1_ASM18252v1/ na na na haploid bacteria 4770886 4770663 47.500000 2 5 12 NCBI RefSeq GCF_000182525.1-RS_2026_05_05 2026-05-05 4334 4019 101 na GCF_000182545.1 PRJNA224116 SAMN02403944 ACNT00000000.1 na 545431 632 Yersinia pestis Pestoides A strain=Pestoides A na latest Scaffold Major Full 2009-05-08 ASM18254v1 ERIC (Enteropathogen Resource Integration Center) GCA_000182545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/545/GCF_000182545.1_ASM18254v1/ na na na haploid bacteria 4750606 4750606 47.500000 3 37 37 NCBI RefSeq GCF_000182545.1-RS_2026_05_31 2026-05-31 4347 3946 97 na GCF_000182565.1 PRJNA319336 SAMN00716787 ACOE00000000.1 reference genome 645134 109760 Spizellomyces punctatus DAOM BR117 strain=DAOM BR117 na latest Scaffold Major Full 2015-07-29 S_punctatus_V1 Broad Institute GCA_000182565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/565/GCF_000182565.1_S_punctatus_V1/ na na na haploid fungi 24131112 23906001 47.500000 0 38 329 Broad Institute Annotation submitted by Broad Institute 2022-04-18 9169 8950 214 na GCF_000182585.2 PRJNA224116 SAMN02470263 ACOJ00000000.1 na 536230 28450 Burkholderia pseudomallei MSHR346 strain=MSHR346 na latest Chromosome Major Full 2009-05-13 ASM18258v2 Los Alamos National Laboratory GCA_000182585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/585/GCF_000182585.2_ASM18258v2/ na na na haploid bacteria 7348945 7348945 68.000000 2 2 2 NCBI RefSeq GCF_000182585.2-RS_2026_04_20 2026-04-20 6586 6337 76 na GCF_000182605.1 PRJNA224116 SAMN02470281 ACOM00000000.1 na 632245 1492 Clostridium butyricum E4 str. BoNT E BL5262 strain=BoNT E BL5262 na latest Scaffold Major Full 2009-05-15 ASM18260v1 J. Craig Venter Institute GCA_000182605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/605/GCF_000182605.1_ASM18260v1/ na na na haploid bacteria 4758422 4758422 28.500000 1 13 13 NCBI RefSeq GCF_000182605.1-RS_2026_03_30 2026-03-30 4370 4181 137 na GCF_000182625.1 PRJNA224116 SAMN02472082 ACOR00000000.1 na 641140 235 Brucella abortus str. 2308 A strain=2308 A A latest Contig Major Full 2009-05-19 ASM18262v1 Virginia Bioinformatics Institute GCA_000182625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/625/GCF_000182625.1_ASM18262v1/ na na na haploid bacteria 3277197 3277197 57.000000 2 9 9 NCBI RefSeq GCF_000182625.1-RS_2026_04_24 2026-04-24 3225 2978 64 na GCF_000182645.1 PRJNA224116 SAMN02472089 ACQA00000000.1 na 641118 94625 Brucella intermedia LMG 3301 strain=LMG 3301 na latest Scaffold Major Full 2009-06-11 ASM18264v1 Virginia Bioinformatics Institute GCA_000182645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/645/GCF_000182645.1_ASM18264v1/ na assembly from type material na haploid bacteria 4725392 4725392 57.500000 3 4 4 NCBI RefSeq GCF_000182645.1-RS_2026_01_27 2026-01-27 4522 4263 73 na GCF_000182725.1 PRJNA224116 SAMN02472076 ADEZ00000000.1 na 470735 1218315 Brucella inopinata BO1 strain=BO1 na latest Contig Major Full 2010-09-03 ASM18272v1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA GCA_000182725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/725/GCF_000182725.1_ASM18272v1/ na assembly from type material na haploid bacteria 3366774 3366774 57.000000 2 55 55 NCBI RefSeq GCF_000182725.1-RS_2026_05_13 2026-05-13 3271 3107 55 na GCF_000182745.2 PRJNA224116 SAMD00060987 na reference genome 634177 1177712 Komagataeibacter medellinensis NBRC 3288 strain=NBRC 3288 na latest Complete Genome Major Full 2011-09-25 ASM18274v1 National Institute of Technology and Evaluation GCA_000182745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/745/GCF_000182745.2_ASM18274v1/ na assembly from type material na haploid bacteria 3513191 3513191 60.500000 8 8 8 NCBI RefSeq GCF_000182745.2-RS_2025_12_22 2025-12-22 3391 3189 76 22123756 GCF_000182765.1 PRJNA12179 na na reference genome 5480 5480 Lodderomyces parapsilosis strain=CDC317 na latest Contig Major Full 2011-10-26 ASM18276v2 Wellcome Trust Sanger Institute GCA_000182765.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/765/GCF_000182765.1_ASM18276v2/ na na na haploid fungi 12998393 12998393 38.500000 0 8 8 Wellcome Trust Sanger Institute GCF_000182765.1-RS_2026_03 2026-03-04 5950 5827 97 7521869;7545927;7715605;11071936;11923346;15133118;15449175;15657051 GCF_000182835.1 PRJNA224116 SAMN02603937 na na 767455 1584 Lactobacillus delbrueckii subsp. bulgaricus ND02 strain=ND02 na latest Complete Genome Major Full 2010-11-19 ASM18283v1 The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China GCA_000182835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/835/GCF_000182835.1_ASM18283v1/ na na na haploid bacteria 2131976 2131976 49.500000 2 2 2 NCBI RefSeq GCF_000182835.1-RS_2026_03_27 2026-03-27 2167 1923 128 21515763 GCF_000182855.2 PRJNA224116 SAMN02603306 na na 695560 1604 Lactobacillus amylovorus GRL 1112 strain=GRL 1112 na latest Chromosome Major Full 2011-03-29 ASM18285v1 Helsinki University, Finland GCA_000182855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/855/GCF_000182855.2_ASM18285v1/ na na na haploid bacteria 2126674 2126664 38.000000 3 3 4 NCBI RefSeq GCF_000182855.2-RS_2026_04_14 2026-04-14 2202 2022 75 21131492 GCF_000182875.1 PRJNA224116 SAMN02603938 na na 767463 1308 Streptococcus thermophilus ND03 strain=ND03 na latest Complete Genome Major Full 2010-11-19 ASM18287v1 The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China GCA_000182875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/875/GCF_000182875.1_ASM18287v1/ na na na haploid bacteria 1831949 1831949 39.000000 1 1 1 NCBI RefSeq GCF_000182875.1-RS_2026_03_31 2026-03-31 1908 1599 76 21131489 GCF_000182895.1 PRJNA29797 SAMN02953595 AACS00000000.2 reference genome 240176 5346 Coprinopsis cinerea okayama7#130 strain=okayama7#130 na latest Contig Major Full 2010-06-16 CC3 Broad Institute GCA_000182895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/895/GCF_000182895.1_CC3/ na na na haploid fungi 36150142 36150142 51.500000 13 67 67 Broad Institute Annotation submitted by Broad Institute 2017-09-05 13657 13355 290 20547848 GCF_000182925.2 PRJNA132 SAMN02953583 AABX00000000.3 reference genome 367110 5141 Neurospora crassa OR74A strain=OR74A na latest Chromosome Major Full 2013-10-25 NC12 Broad Institute GCA_000182925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/925/GCF_000182925.2_NC12/ na na na haploid fungi 41037538 40996763 48.500000 7 20 411 Broad Institute Annotation submitted by Broad Institute 2023-04-03 10590 9757 815 12712197 GCF_000182965.3 PRJNA14005 SAMN02953594 na reference genome 237561 5476 Candida albicans SC5314 strain=SC5314 na latest Chromosome Major Full 2016-10-12 ASM18296v3 Stanford University GCA_000182965.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/182/965/GCF_000182965.3_ASM18296v3/ na na na haploid fungi 14282666 14276407 33.500000 8 8 88 CGD CGD A22-s07-m01-r01 2025-12-05 6263 6030 215 15123810;17419877;24025428 GCF_000183005.1 PRJNA224116 SAMN00792453 ADUL00000000.1 na 670897 562 Escherichia coli 2362-75 strain=2362-75 na latest Contig Major Full 2010-11-22 ASM18300v1 Institute for Genome Sciences GCA_000183005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/005/GCF_000183005.1_ASM18300v1/ na na na haploid bacteria 5173444 5173444 50.500000 0 83 83 NCBI RefSeq GCF_000183005.1-RS_2026_06_13 2026-06-13 5270 4738 131 na GCF_000183115.1 PRJNA224116 SAMN02603013 na na 887061 887061 Methylovorus sp. MP688 strain=MP688 na latest Complete Genome Major Full 2010-11-23 ASM18311v1 Beijing Institute of Biotechnology GCA_000183115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/115/GCF_000183115.1_ASM18311v1/ na na na haploid bacteria 2862391 2862391 55.500000 1 1 1 NCBI RefSeq GCF_000183115.1-RS_2024_08_13 2024-08-13 2741 2669 55 21148725 GCF_000183135.1 PRJNA224116 SAMN00016731 na reference genome 694427 185300 Paludibacter propionicigenes WB4 strain=WB4 na latest Complete Genome Major Full 2010-11-23 ASM18313v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/135/GCF_000183135.1_ASM18313v1/ na assembly from type material na haploid bacteria 3685504 3685504 39.000000 1 1 1 NCBI RefSeq GCF_000183135.1-RS_2026_03_12 2026-03-12 3028 2950 63 21475585 GCF_000183155.1 PRJNA224116 SAMN00138930 na reference genome 693978 34085 Riemerella anatipestifer ATCC 11845 = DSM 15868 strain=DSM 15868 na latest Complete Genome Major Full 2010-11-23 ASM18315v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/155/GCF_000183155.1_ASM18315v1/ na assembly from type material na haploid bacteria 2155121 2155121 35.000000 1 1 1 NCBI RefSeq GCF_000183155.1-RS_2025_09_25 2025-09-25 2053 1983 52 21677851 GCF_000183185.1 PRJNA224116 SAMN02603316 na na 907287 2099 Mesomycoplasma hyopneumoniae 168 strain=168 na latest Complete Genome Major Full 2010-11-24 ASM18318v1 Huazhong Agricultural University GCA_000183185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/185/GCF_000183185.1_ASM18318v1/ na na na haploid bacteria 925576 925576 28.500000 1 1 1 NCBI RefSeq GCF_000183185.1-RS_2026_02_26 2026-02-26 745 693 36 21148737 GCF_000183205.1 PRJNA224116 SAMN00116774 AENN00000000.1 reference genome 908337 88132 Eremococcus coleocola ACS-139-V-Col8 strain=ACS-139-V-Col8 na latest Contig Major Full 2010-11-24 ASM18320v1 J. Craig Venter Institute GCA_000183205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/205/GCF_000183205.1_ASM18320v1/ na na na haploid bacteria 1773745 1773745 39.000000 0 21 21 NCBI RefSeq GCF_000183205.1-RS_2026_05_01 2026-05-01 1769 1681 53 na GCF_000183225.1 PRJNA224116 SAMN02604265 na na 713603 9 Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) strain=LL01 na latest Complete Genome Major Full 2010-11-04 ASM18322v1 University of York GCA_000183225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/225/GCF_000183225.1_ASM18322v1/ na na na haploid bacteria 641799 641799 26.500000 1 1 1 NCBI RefSeq GCF_000183225.1-RS_2025_06_06 2025-06-06 625 553 37 21392141 GCF_000183285.1 PRJNA224116 SAMN02604267 na na 713601 9 Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) strain=JF99 na latest Complete Genome Major Full 2010-11-04 ASM18328v1 University of York GCA_000183285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/285/GCF_000183285.1_ASM18328v1/ na na na haploid bacteria 641716 641716 26.500000 1 1 1 NCBI RefSeq GCF_000183285.1-RS_2025_01_31 2025-01-31 621 564 37 21392141 GCF_000183325.1 PRJNA224116 SAMN02469392 AENJ00000000.1 na 927655 36808 Corynebacterium bovis DSM 20582 = CIP 54.80 strain=DSM 20582 na latest Contig Major Full 2010-11-26 ASM18332v1 Center of Biotechnology, Bielefeld University GCA_000183325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/325/GCF_000183325.1_ASM18332v1/ na assembly from type material na haploid bacteria 2522962 2522962 72.500000 0 503 503 NCBI RefSeq GCF_000183325.1-RS_2025_08_18 2025-08-18 2333 2120 56 22843578 GCF_000183345.1 PRJNA224116 SAMN02603727 na na 685038 562 Escherichia coli O83:H1 str. NRG 857C strain=NRG 857C na latest Complete Genome Major Full 2010-11-30 ASM18334v1 Public Health Agency of Canada Laboratory for Foodborne Zoonoses GCA_000183345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/345/GCF_000183345.1_ASM18334v1/ na na na haploid bacteria 4894879 4894879 50.500000 2 2 2 NCBI RefSeq GCF_000183345.1-RS_2025_04_26 2025-04-26 4767 4502 111 17900983;18312396;21108814 GCF_000183365.1 PRJNA224116 SAMN02603458 na reference genome 880447 2105 Mycoplasma leachii PG50 strain=PG50 na latest Complete Genome Major Full 2010-11-30 ASM18336v1 JCVI GCA_000183365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/365/GCF_000183365.1_ASM18336v1/ na assembly from type material na haploid bacteria 1008951 1008951 24.000000 1 1 1 NCBI RefSeq GCF_000183365.1-RS_2025_12_13 2025-12-13 909 841 39 22843585 GCF_000183385.1 PRJNA224116 SAMN02604028 na reference genome 289397 28903 Mycoplasmopsis bovis PG45 strain=PG45 na latest Complete Genome Major Full 2010-11-30 ASM18338v1 TIGR GCA_000183385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/385/GCF_000183385.1_ASM18338v1/ na assembly from type material na haploid bacteria 1003404 1003404 29.500000 1 1 1 NCBI RefSeq GCF_000183385.1-RS_2025_08_31 2025-08-31 880 798 43 21134966 GCF_000183405.1 PRJNA224116 SAMN00102793 na reference genome 768670 477976 Calditerrivibrio nitroreducens DSM 19672 strain=DSM 19672 na latest Complete Genome Major Full 2010-11-30 ASM18340v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/405/GCF_000183405.1_ASM18340v1/ na assembly from type material na haploid bacteria 2216552 2216552 35.500000 2 2 2 NCBI RefSeq GCF_000183405.1-RS_2026_05_26 2026-05-26 2183 2116 51 21475587 GCF_000183425.1 PRJNA224116 SAMN00138949 na reference genome 643867 1006 Marivirga tractuosa DSM 4126 strain=DSM 4126 na latest Complete Genome Major Full 2010-11-30 ASM18342v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/425/GCF_000183425.1_ASM18342v1/ na assembly from type material na haploid bacteria 4516490 4516490 35.500000 2 2 2 NCBI RefSeq GCF_000183425.1-RS_2025_11_22 2025-11-22 3811 3750 47 21677852 GCF_000183445.1 PRJNA224116 SAMN00116779 AENT00000000.1 na 910314 309120 Dialister micraerophilus UPII 345-E strain=UPII 345-E na latest Contig Major Full 2010-12-01 ASM18344v1 J. Craig Venter Institute GCA_000183445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/445/GCF_000183445.1_ASM18344v1/ na na na haploid bacteria 1395825 1395825 35.500000 0 32 32 NCBI RefSeq GCF_000183445.1-RS_2026_03_31 2026-03-31 1356 1295 53 na GCF_000183465.1 PRJNA224116 SAMN00116778 AENS00000000.1 na 910313 361101 Streptococcus pseudoporcinus SPIN 20026 strain=SPIN 20026 na latest Contig Major Full 2010-12-01 ASM18346v1 J. Craig Venter Institute GCA_000183465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/465/GCF_000183465.1_ASM18346v1/ na na na haploid bacteria 2111372 2111372 37.000000 0 35 35 NCBI RefSeq GCF_000183465.1-RS_2025_07_30 2025-07-30 2038 1937 41 na GCF_000183485.2 PRJNA224116 SAMN00116786 AENZ00000000.1 na 908612 908612 Alistipes sp. HGB5 strain=HGB5 na latest Contig Major Full 2010-12-02 ASM18348v1 J. Craig Venter Institute GCA_000183485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/485/GCF_000183485.2_ASM18348v1/ na na na haploid bacteria 3464615 3464615 57.500000 0 86 86 NCBI RefSeq GCF_000183485.2-RS_2025_08_18 2025-08-18 2994 2896 53 na GCF_000183505.1 PRJNA224116 SAMN00116785 AENU00000000.1 na 879309 671228 Veillonella sp. oral taxon 158 str. F0412 strain=F0412 na latest Contig Major Full 2010-12-02 ASM18350v1 J. Craig Venter Institute GCA_000183505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/505/GCF_000183505.1_ASM18350v1/ na na na haploid bacteria 2176752 2176752 39.000000 0 21 21 NCBI RefSeq GCF_000183505.1-RS_2024_06_10 2024-06-10 2053 1901 64 na GCF_000183545.2 PRJNA224116 SAMN00116773 AENY00000000.2 reference genome 867903 175696 Thermaerobacter subterraneus DSM 13965 strain=DSM 13965 na latest Scaffold Major Full 2012-11-05 ASM18354v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000183545.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/545/GCF_000183545.2_ASM18354v3/ na assembly from type material na haploid bacteria 2888741 2888441 72.000000 0 2 5 NCBI RefSeq GCF_000183545.2-RS_2026_04_14 2026-04-14 2428 2338 58 na GCF_000183565.1 PRJNA224116 SAMN00116775 AENP00000000.1 na 908338 54005 Peptoniphilus harei ACS-146-V-Sch2b strain=ACS-146-V-Sch2b na latest Contig Major Full 2010-11-29 ASM18356v1 J. Craig Venter Institute GCA_000183565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/565/GCF_000183565.1_ASM18356v1/ na na na haploid bacteria 1836030 1836030 34.500000 0 32 32 NCBI RefSeq GCF_000183565.1-RS_2025_08_18 2025-08-18 1773 1702 40 na GCF_000183585.1 PRJNA224116 SAMN00116782 AENW00000000.1 na 908340 908340 Clostridium sp. HGF2 strain=HGF2 na latest Contig Major Full 2010-11-30 ASM18358v1 J. Craig Venter Institute GCA_000183585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/585/GCF_000183585.1_ASM18358v1/ na na na haploid bacteria 4099852 4099852 44.000000 0 60 60 NCBI RefSeq GCF_000183585.1-RS_2025_01_22 2025-01-22 3992 3898 54 na GCF_000183605.1 PRJNA224116 SAMN00116777 AENO00000000.1 na 910312 28123 Porphyromonas asaccharolytica PR426713P-I strain=PR426713P-I na latest Contig Major Full 2010-11-30 ASM18360v1 J. Craig Venter Institute GCA_000183605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/605/GCF_000183605.1_ASM18360v1/ na na na haploid bacteria 2199119 2199119 52.500000 0 58 58 NCBI RefSeq GCF_000183605.1-RS_2025_07_24 2025-07-24 1734 1662 51 na GCF_000183625.1 PRJNA224116 SAMN00116784 AENV00000000.1 na 879310 712531 Selenomonas sp. oral taxon 137 str. F0430 strain=F0430 na latest Contig Major Full 2010-11-30 ASM18362v1 J. Craig Venter Institute GCA_000183625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/625/GCF_000183625.1_ASM18362v1/ na na na haploid bacteria 2475066 2475066 56.500000 0 15 15 NCBI RefSeq GCF_000183625.1-RS_2024_08_21 2024-08-21 2390 2237 72 na GCF_000183645.1 PRJNA224116 SAMN02603225 na na 931281 303 Pseudomonas putida BIRD-1 strain=BIRD-1 na latest Complete Genome Major Full 2010-12-03 ASM18364v1 Estacion Experimental del Zaidin, CSIC GCA_000183645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/645/GCF_000183645.1_ASM18364v1/ na na na haploid bacteria 5731541 5731541 61.500000 1 1 1 NCBI RefSeq GCF_000183645.1-RS_2025_04_26 2025-04-26 5261 5052 91 21183676 GCF_000183665.1 PRJNA224116 SAMN02604277 na reference genome 658172 556287 Candidatus Liberibacter solanacearum CLso-ZC1 strain=CLso-ZC1 na latest Complete Genome Major Full 2010-12-03 ASM18366v1 USDA, ARS GCA_000183665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/665/GCF_000183665.1_ASM18366v1/ na na na haploid bacteria 1258278 1258278 35.000000 1 1 1 NCBI RefSeq GCF_000183665.1-RS_2024_12_01 2024-12-01 1169 1083 57 21552483 GCF_000183685.1 PRJNA224116 SAMN02463757 ACRM00000000.1 na 435837 1290 Staphylococcus hominis subsp. hominis C80 strain=C80 na latest Scaffold Major Full 2010-12-06 ASM18368v1 Broad Institute GCA_000183685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/685/GCF_000183685.1_ASM18368v1/ na na na haploid bacteria 2268397 2258417 31.500000 0 15 41 NCBI RefSeq GCF_000183685.1-RS_2026_03_30 2026-03-30 2312 2164 84 na GCF_000183705.1 PRJNA224116 SAMN02463752 ACRH00000000.1 na 435838 29388 Staphylococcus capitis C87 strain=C87 na latest Scaffold Major Full 2010-12-06 ASM18370v1 Broad Institute GCA_000183705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/705/GCF_000183705.1_ASM18370v1/ na na na haploid bacteria 2473608 2460970 33.000000 0 14 46 NCBI RefSeq GCF_000183705.1-RS_2026_01_30 2026-01-30 2512 2295 84 na GCF_000183725.1 PRJNA224116 SAMN00713566 na reference genome 709032 148813 Sulfuricurvum kujiense DSM 16994 strain=DSM 16994 na latest Complete Genome Major Full 2010-12-02 ASM18372v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/725/GCF_000183725.1_ASM18372v1/ na assembly from type material na haploid bacteria 2819357 2819357 44.500000 5 5 5 NCBI RefSeq GCF_000183725.1-RS_2026_05_01 2026-05-01 2875 2794 62 22675602 GCF_000183745.1 PRJNA224116 SAMN00138957 na reference genome 670487 187137 Oceanithermus profundus DSM 14977 strain=DSM 14977 na latest Complete Genome Major Full 2010-12-02 ASM18374v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000183745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/745/GCF_000183745.1_ASM18374v1/ na assembly from type material na haploid bacteria 2439291 2439291 70.000000 2 2 2 NCBI RefSeq GCF_000183745.1-RS_2026_05_01 2026-05-01 2460 2396 56 21677858 GCF_000183785.1 PRJNA224116 SAMN00792433 ADUV00000000.1 na 198215 623 Shigella flexneri 2a str. 2457T strain=2457T na latest Contig Major Full 2010-12-06 ASM18378v2 Institute for Genome Sciences GCA_000183785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/785/GCF_000183785.1_ASM18378v2/ na na na haploid bacteria 4825496 4825496 50.500000 0 71 71 NCBI RefSeq GCF_000183785.1-RS_2025_07_18 2025-07-18 4952 4075 136 na GCF_000183825.1 PRJNA224116 SAMN02470201 AEOF00000000.1 na 930942 1605 Ligilactobacillus animalis KCTC 3501 = DSM 20602 strain=KCTC 3501 na latest Scaffold Major Full 2010-12-14 ASM18382v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000183825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/825/GCF_000183825.1_ASM18382v1/ na assembly from type material na haploid bacteria 1882795 1865693 41.000000 0 7 32 NCBI RefSeq GCF_000183825.1-RS_2025_09_10 2025-09-10 1844 1724 32 21183665 GCF_000183905.1 PRJNA224116 SAMN01909077 ADXH00000000.1 na 702455 1642 Listeria innocua FSL J1-023 strain=FSL J1-023 na latest Chromosome Major Full 2010-12-15 ASM18390v1 Life Technologies Corporation GCA_000183905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/905/GCF_000183905.1_ASM18390v1/ na na na haploid bacteria 2914007 2796307 37.500000 1 1 1177 NCBI RefSeq GCF_000183905.1-RS_2025_12_23 2025-12-23 3457 3033 24 21126366 GCF_000183945.1 PRJNA224116 SAMN01909078 ADXJ00000000.1 na 702453 1640 Listeria seeligeri FSL N1-067 strain=FSL N1-067 na latest Chromosome Major Full 2010-12-15 ASM18394v1 Life Technologies Corporation GCA_000183945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/945/GCF_000183945.1_ASM18394v1/ na na na haploid bacteria 3140155 2992555 37.500000 1 1 1476 NCBI RefSeq GCF_000183945.1-RS_2025_09_07 2025-09-07 3714 3240 26 21126366 GCF_000183985.1 PRJNA224116 SAMN00215988 AEOH00000000.1 na 873517 1018 Capnocytophaga ochracea F0287 strain=F0287 na latest Scaffold Major Full 2010-12-13 ASM18398v1 Baylor College of Medicine GCA_000183985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/183/985/GCF_000183985.1_ASM18398v1/ na na na haploid bacteria 2663545 2635317 39.500000 0 9 61 NCBI RefSeq GCF_000183985.1-RS_2026_01_23 2026-01-23 2237 2161 46 na GCF_000184005.1 PRJNA224116 SAMN02471088 ADNF00000000.1 na 747367 1773 Mycobacterium tuberculosis HN878 strain=HN878 na latest Chromosome Major Full 2010-12-14 ASM18400v1 Texas A&M University GCA_000184005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/005/GCF_000184005.1_ASM18400v1/ na na na haploid bacteria 4404672 4331707 65.500000 1 1 102 NCBI RefSeq GCF_000184005.1-RS_2025_06_28 2025-06-28 4215 3927 51 21110864 GCF_000184025.1 PRJNA224116 SAMN02471089 ADNG00000000.1 na 747368 1773 Mycobacterium tuberculosis X122 strain=X122 na latest Chromosome Major Full 2010-12-14 ASM18402v1 Texas A&M University GCA_000184025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/025/GCF_000184025.1_ASM18402v1/ na na na haploid bacteria 4404714 4352693 65.500000 1 1 94 NCBI RefSeq GCF_000184025.1-RS_2025_06_28 2025-06-28 4224 3920 51 21110864 GCF_000184045.1 PRJNA224116 SAMN02471041 ADNH00000000.1 na 747369 1773 Mycobacterium tuberculosis R1207 strain=R1207 na latest Chromosome Major Full 2010-12-14 ASM18404v1 Texas A&M University GCA_000184045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/045/GCF_000184045.1_ASM18404v1/ na na na haploid bacteria 4397271 4345003 65.500000 1 1 99 NCBI RefSeq GCF_000184045.1-RS_2025_06_29 2025-06-29 4219 3927 51 21110864 GCF_000184065.1 PRJNA224116 SAMN02603856 na na 234831 234831 Pseudoalteromonas sp. SM9913 strain=SM9913 na latest Complete Genome Major Full 2010-12-14 ASM18406v1 ShanDong University GCA_000184065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/065/GCF_000184065.1_ASM18406v1/ na na na haploid bacteria 4037671 4037671 40.500000 2 2 2 NCBI RefSeq GCF_000184065.1-RS_2025_08_25 2025-08-25 3666 3529 91 20703316 GCF_000184135.1 PRJNA224116 SAMN02469905 AENH00000000.1 na 913239 34085 Riemerella anatipestifer RA-YM strain=RA-YM na latest Contig Major Full 2010-12-14 ASM18413v2 Huazhong Agricultural University GCA_000184135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/135/GCF_000184135.1_ASM18413v2/ na na na haploid bacteria 2130198 2130198 35.000000 0 29 29 NCBI RefSeq GCF_000184135.1-RS_2025_12_08 2025-12-08 2025 1959 46 21183670 GCF_000184185.1 PRJNA224116 SAMN02602978 na na 566546 562 Escherichia coli W strain=W na latest Complete Genome Major Full 2010-12-14 ASM18418v1 AIBN/KRIBB GCA_000184185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/185/GCF_000184185.1_ASM18418v1/ na na na haploid bacteria 5008864 5008864 51.000000 3 3 3 NCBI RefSeq GCF_000184185.1-RS_2025_06_09 2025-06-09 4914 4663 124 21208457 GCF_000184205.1 PRJNA224116 SAMN02603954 na na 718271 197 Campylobacter jejuni subsp. jejuni S3 strain=S3 na latest Complete Genome Major Full 2010-12-14 ASM18420v1 The University of Arizona, Department of Veterinary Science & Microbiology GCA_000184205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/205/GCF_000184205.1_ASM18420v1/ na na na haploid bacteria 1724586 1724586 30.500000 2 2 2 NCBI RefSeq GCF_000184205.1-RS_2025_06_27 2025-06-27 1827 1703 56 21217004 GCF_000184285.1 PRJNA224116 SAMN02470831 AEOS00000000.1 na 1423822 1610 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 strain=KCTC 3535 na latest Contig Major Full 2010-12-17 ASM18428v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000184285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/285/GCF_000184285.1_ASM18428v1/ na assembly from type material na haploid bacteria 2815780 2815780 43.000000 0 433 433 NCBI RefSeq GCF_000184285.1-RS_2025_12_06 2025-12-06 2933 2667 58 na GCF_000184325.1 PRJNA224116 SAMN02603955 na na 903510 29494 Vibrio furnissii NCTC 11218 strain=NCTC 11218 na latest Complete Genome Major Full 2010-12-17 ASM18432v1 The University of Exeter GCA_000184325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/325/GCF_000184325.1_ASM18432v1/ na na na haploid bacteria 4916408 4916408 50.500000 2 2 2 NCBI RefSeq GCF_000184325.1-RS_2026_03_27 2026-03-27 4588 4381 125 21217006 GCF_000184345.1 PRJNA224116 SAMN00191235 na reference genome 869211 154 Winmispira thermophila DSM 6578 strain=DSM 6578 na latest Complete Genome Major Full 2011-07-06 ASM18434v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000184345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/345/GCF_000184345.1_ASM18434v2/ na assembly from type material na haploid bacteria 2560222 2560222 61.000000 1 1 1 NCBI RefSeq GCF_000184345.1-RS_2026_05_01 2026-05-01 2368 2280 55 na GCF_000184365.1 PRJNA224116 SAMN00189158 AECT00000000.1 na 706437 1328 Streptococcus anginosus F0211 strain=F0211 na latest Contig Major Full 2010-12-17 ASM18436v1 Washington University Genome Center GCA_000184365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/365/GCF_000184365.1_ASM18436v1/ na na na haploid bacteria 1993709 1993709 38.500000 0 63 63 NCBI RefSeq GCF_000184365.1-RS_2025_07_30 2025-07-30 1960 1835 37 na GCF_000184435.1 PRJNA224116 SAMN00713568 na reference genome 278137 1804 Mycolicibacterium gilvum Spyr1 strain=Spyr1 na latest Complete Genome Major Full 2010-12-21 ASM18443v1 US DOE Joint Genome Institute GCA_000184435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/435/GCF_000184435.1_ASM18443v1/ na na na haploid bacteria 5783292 5783292 68.000000 3 3 3 NCBI RefSeq GCF_000184435.1-RS_2026_04_26 2026-04-26 5561 5348 56 22180818 GCF_000184455.2 PRJNA28175 SAMD00067075 na reference genome 510516 5062 Aspergillus oryzae RIB40 strain=RIB40 na latest Chromosome Major Full 2011-06-24 ASM18445v3 National Institute of Technology and Evaluation (NITE), Japan GCA_000184455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/455/GCF_000184455.2_ASM18445v3/ na na na haploid fungi 37882812 37088482 48.500000 8 11 28 National Institute of Technology and Evaluation (NITE), Japan Annotation submitted by National Institute of Technology and Evaluation (NITE), Japan 2025-09-15 12347 12074 270 16372010 GCF_000184475.1 PRJNA224116 SAMN02435970 AEPK00000000.1 na 933263 470 Acinetobacter baumannii UMB001 strain=UMB001 na latest Contig Major Full 2010-12-21 ASM18447v2 Institute for Genome Sciences GCA_000184475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/475/GCF_000184475.1_ASM18447v2/ na na na haploid bacteria 4013480 4013480 39.000000 0 118 118 NCBI RefSeq GCF_000184475.1-RS_2025_09_10 2025-09-10 3989 3623 85 21639920 GCF_000184495.1 PRJNA224116 SAMN02435947 AEPL00000000.1 na 933264 470 Acinetobacter baumannii UMB002 strain=UMB002 na latest Contig Major Full 2010-12-21 ASM18449v2 Institute for Genome Sciences GCA_000184495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/495/GCF_000184495.1_ASM18449v2/ na na na haploid bacteria 3936001 3936001 39.000000 0 74 74 NCBI RefSeq GCF_000184495.1-RS_2026_02_07 2026-02-07 3791 3554 81 21639920 GCF_000184535.1 PRJNA224116 SAMN02470200 AEOT00000000.1 na 936140 1612 Companilactobacillus farciminis KCTC 3681 = DSM 20184 strain=KCTC 3681 na latest Scaffold Major Full 2010-12-23 ASM18453v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000184535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/535/GCF_000184535.1_ASM18453v1/ na assembly from type material na haploid bacteria 2498309 2470630 36.500000 0 5 35 NCBI RefSeq GCF_000184535.1-RS_2026_01_27 2026-01-27 2509 2401 60 21257766 GCF_000184685.1 PRJNA224116 SAMN00713569 na reference genome 710696 53358 Intrasporangium calvum DSM 43043 strain=DSM 43043 na latest Complete Genome Major Full 2010-12-29 ASM18468v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000184685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/685/GCF_000184685.1_ASM18468v1/ na assembly from type material na haploid bacteria 4024382 4024382 70.500000 1 1 1 NCBI RefSeq GCF_000184685.1-RS_2026_04_26 2026-04-26 3715 3624 56 21304734 GCF_000184705.1 PRJNA224116 SAMN00713570 na reference genome 644966 73919 Thermaerobacter marianensis DSM 12885 strain=DSM 12885 na latest Complete Genome Major Full 2010-12-29 ASM18470v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000184705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/705/GCF_000184705.1_ASM18470v1/ na assembly from type material na haploid bacteria 2844696 2844696 72.500000 1 1 1 NCBI RefSeq GCF_000184705.1-RS_2026_04_14 2026-04-14 2438 2338 60 21304738 GCF_000184745.1 PRJNA224116 SAMN00149467 na na 595537 34073 Variovorax paradoxus EPS strain=EPS na latest Complete Genome Major Full 2010-12-29 ASM18474v1 US DOE Joint Genome Institute GCA_000184745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/745/GCF_000184745.1_ASM18474v1/ na na na haploid bacteria 6550056 6550056 66.500000 1 1 1 NCBI RefSeq GCF_000184745.1-RS_2025_02_24 2025-02-24 6101 5990 66 24158554 GCF_000184765.1 PRJNA224116 SAMN00792450 ADUM00000000.1 na 670892 562 Escherichia coli 3431 strain=3431 na latest Contig Major Full 2010-12-29 ASM18476v2 Institute for Genome Sciences GCA_000184765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/765/GCF_000184765.1_ASM18476v2/ na na na haploid bacteria 5223419 5223419 51.000000 0 127 127 NCBI RefSeq GCF_000184765.1-RS_2025_06_13 2025-06-13 5423 4856 122 na GCF_000184925.1 PRJNA224116 SAMN00713572 na na 637887 1515 Acetivibrio thermocellus DSM 1313 strain=DSM 1313 na latest Complete Genome Major Full 2011-01-04 ASM18492v1 US DOE Joint Genome Institute GCA_000184925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/925/GCF_000184925.1_ASM18492v1/ na na na haploid bacteria 3561619 3561619 39.000000 1 1 1 NCBI RefSeq GCF_000184925.1-RS_2025_08_23 2025-08-23 3102 2985 72 21460082 GCF_000184945.1 PRJNA224116 SAMN00216833 AEPD00000000.1 reference genome 873513 28126 Segatella buccae ATCC 33574 strain=ATCC 33574 na latest Scaffold Major Full 2011-01-12 ASM18494v1 Baylor College of Medicine GCA_000184945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/184/945/GCF_000184945.1_ASM18494v1/ na assembly from type material na haploid bacteria 3284105 3222824 51.000000 0 21 69 NCBI RefSeq GCF_000184945.1-RS_2025_12_10 2025-12-10 2568 2471 56 na GCF_000185025.1 PRJNA224116 SAMN02471538 AEQZ00000000.1 na 909420 487 Neisseria meningitidis H44/76 strain=H44/76 na latest Contig Major Full 2011-01-13 ASM18502v2 Academic Medical Center Amsterdam GCA_000185025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/025/GCF_000185025.1_ASM18502v2/ na na na haploid bacteria 2170379 2170379 51.500000 0 46 46 NCBI RefSeq GCF_000185025.1-RS_2026_06_19 2026-06-19 2223 1952 58 21378179 GCF_000185045.1 PRJNA224116 SAMN02470190 AEOP00000000.1 na 930946 1631 Fructobacillus fructosus KCTC 3544 strain=KCTC 3544 na latest Contig Major Full 2011-01-05 ASM18504v1 Korea Research Institute of Bioscience and Biotechnology GCA_000185045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/045/GCF_000185045.1_ASM18504v1/ na assembly from type material na haploid bacteria 1474908 1474908 44.500000 0 57 57 NCBI RefSeq GCF_000185045.1-RS_2025_07_30 2025-07-30 1577 1500 53 na GCF_000185145.2 PRJNA224116 SAMN00216885 AEPE00000000.2 reference genome 873533 28134 Hoylesella oralis ATCC 33269 strain=ATCC 33269 na latest Scaffold Major Full 2011-02-16 ASM18514v2 Baylor College of Medicine GCA_000185145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/145/GCF_000185145.2_ASM18514v2/ na assembly from type material na haploid bacteria 2839537 2833787 44.500000 0 4 6 NCBI RefSeq GCF_000185145.2-RS_2025_09_13 2025-09-13 2329 2232 59 na GCF_000185185.1 PRJNA224116 SAMN02603026 na na 907238 210 Helicobacter pylori India7 strain=India7 na latest Complete Genome Major Full 2011-01-06 ASM18518v1 Berg lab, Washington University Medical Shool GCA_000185185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/185/GCF_000185185.1_ASM18518v1/ na na na haploid bacteria 1675918 1675918 39.000000 1 1 1 NCBI RefSeq GCF_000185185.1-RS_2026_01_23 2026-01-23 1622 1473 45 na GCF_000185205.1 PRJNA224116 SAMN02603024 na na 907240 210 Helicobacter pylori Gambia94/24 strain=Gambia94/24 na latest Complete Genome Major Full 2011-01-06 ASM18520v1 Berg lab, Washington University Medical Shool GCA_000185205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/205/GCF_000185205.1_ASM18520v1/ na na na haploid bacteria 1712468 1712468 39.000000 2 2 2 NCBI RefSeq GCF_000185205.1-RS_2026_01_23 2026-01-23 1641 1511 45 na GCF_000185225.1 PRJNA224116 SAMN02603023 na na 907237 210 Helicobacter pylori Lithuania75 strain=Lithuania75 na latest Complete Genome Major Full 2011-01-06 ASM18522v1 Berg lab, Washington University Medical School GCA_000185225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/225/GCF_000185225.1_ASM18522v1/ na na na haploid bacteria 1640673 1640673 39.000000 2 2 2 NCBI RefSeq GCF_000185225.1-RS_2026_01_23 2026-01-23 1583 1425 45 na GCF_000185245.1 PRJNA224116 SAMN02603025 na na 907239 210 Helicobacter pylori SouthAfrica7 strain=SouthAfrica7 na latest Complete Genome Major Full 2011-01-06 ASM18524v1 Berg lab, Washington University Medical Shool GCA_000185245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/245/GCF_000185245.1_ASM18524v1/ na na na haploid bacteria 1679829 1679829 38.500000 2 2 2 NCBI RefSeq GCF_000185245.1-RS_2026_01_15 2026-01-15 1605 1464 45 24072860 GCF_000185265.1 PRJNA224116 SAMN00260261 AEPO00000000.1 na 888049 1303 Streptococcus oralis ATCC 49296 strain=ATCC 49296 na latest Scaffold Major Full 2011-01-12 ASM18526v1 Baylor College of Medicine GCA_000185265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/265/GCF_000185265.1_ASM18526v1/ na na na haploid bacteria 2068336 2053700 41.000000 0 5 17 NCBI RefSeq GCF_000185265.1-RS_2026_01_30 2026-01-30 2014 1947 38 na GCF_000185285.1 PRJNA224116 SAMN00260256 AEPP00000000.1 na 888052 651609 Actinomyces sp. oral taxon 180 str. F0310 strain=F0310 na latest Scaffold Major Full 2011-01-12 ASM18528v1 Baylor College of Medicine GCA_000185285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/285/GCF_000185285.1_ASM18528v1/ na na na haploid bacteria 2372658 2347423 66.500000 0 6 42 NCBI RefSeq GCF_000185285.1-RS_2025_08_25 2025-08-25 2071 1987 54 na GCF_000185305.1 PRJNA224116 SAMN00210783 AEPS00000000.1 na 888057 739 Aggregatibacter segnis ATCC 33393 strain=ATCC 33393 na latest Scaffold Major Full 2011-01-14 ASM18530v1 Baylor College of Medicine GCA_000185305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/305/GCF_000185305.1_ASM18530v1/ na assembly from type material na haploid bacteria 2012010 1992124 42.500000 0 5 19 NCBI RefSeq GCF_000185305.1-RS_2025_12_23 2025-12-23 1941 1856 57 na GCF_000185325.1 PRJNA224116 SAMN00210774 AEPT00000000.1 na 888827 28197 Aliarcobacter butzleri JV22 strain=JV22 na latest Scaffold Major Full 2011-01-14 ASM18532v1 Baylor College of Medicine GCA_000185325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/325/GCF_000185325.1_ASM18532v1/ na na na haploid bacteria 2302726 2253392 27.000000 0 22 78 NCBI RefSeq GCF_000185325.1-RS_2025_12_24 2025-12-24 2385 2283 50 na GCF_000185345.1 PRJNA224116 SAMN00216973 AEPU00000000.1 na 888826 28080 Campylobacter upsaliensis JV21 strain=JV21 na latest Scaffold Major Full 2011-01-14 ASM18534v1 Baylor College of Medicine GCA_000185345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/345/GCF_000185345.1_ASM18534v1/ na na na haploid bacteria 1649151 1621689 35.000000 0 14 49 NCBI RefSeq GCF_000185345.1-RS_2025_12_12 2025-12-12 1746 1648 46 na GCF_000185365.1 PRJNA224116 SAMN00215989 AEPV00000000.1 na 888064 246144 Enterococcus italicus DSM 15952 strain=DSM 15952 na latest Scaffold Major Full 2011-01-14 ASM18536v1 Baylor College of Medicine GCA_000185365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/365/GCF_000185365.1_ASM18536v1/ na assembly from type material na haploid bacteria 2415788 2308337 39.000000 0 55 156 NCBI RefSeq GCF_000185365.1-RS_2026_05_16 2026-05-16 2334 2164 48 na GCF_000185385.1 PRJNA224116 SAMN00216780 AEPW00000000.1 reference genome 887325 467210 Lachnoanaerobaculum saburreum DSM 3986 strain=DSM 3986 na latest Scaffold Major Full 2011-01-14 ASM18538v1 Baylor College of Medicine GCA_000185385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/385/GCF_000185385.1_ASM18538v1/ na assembly from type material na haploid bacteria 3082404 2970488 36.500000 0 37 150 NCBI RefSeq GCF_000185385.1-RS_2025_12_13 2025-12-13 2909 2751 62 na GCF_000185405.1 PRJNA224116 SAMN00216799 AEPX00000000.1 na 888801 147802 Lactobacillus iners ATCC 55195 strain=ATCC 55195 na latest Scaffold Major Full 2011-01-12 ASM18540v1 Baylor College of Medicine GCA_000185405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/405/GCF_000185405.1_ASM18540v1/ na na na haploid bacteria 1238993 1218947 32.500000 0 7 18 NCBI RefSeq GCF_000185405.1-RS_2026_01_30 2026-01-30 1180 1094 54 na GCF_000185425.1 PRJNA224116 SAMN00217011 AEPY00000000.1 na 887326 2051 Mobiluncus curtisii ATCC 51333 strain=ATCC 51333 na latest Scaffold Major Full 2011-01-12 ASM18542v1 Baylor College of Medicine GCA_000185425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/425/GCF_000185425.1_ASM18542v1/ na na na haploid bacteria 2122126 2111654 55.500000 0 6 16 NCBI RefSeq GCF_000185425.1-RS_2026_02_08 2026-02-08 1841 1777 52 na GCF_000185445.1 PRJNA224116 SAMN00253295 AEPZ00000000.1 reference genome 887899 144178 Mobiluncus holmesii ATCC 35242 strain=ATCC 35242 na latest Scaffold Major Full 2011-01-12 ASM18544v1 Baylor College of Medicine GCA_000185445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/445/GCF_000185445.1_ASM18544v1/ na assembly from type material na haploid bacteria 2098776 2087121 55.500000 0 5 15 NCBI RefSeq GCF_000185445.1-RS_2026_05_01 2026-05-01 1799 1733 52 na GCF_000185465.1 PRJNA224116 SAMN02470196 AEQY00000000.1 na 1614 1614 Fructilactobacillus fructivorans strain=KCTC 3543 na latest Scaffold Major Full 2011-01-06 ASM18546v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000185465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/465/GCF_000185465.1_ASM18546v1/ na assembly from type material na haploid bacteria 1373326 1371284 39.000000 0 5 11 NCBI RefSeq GCF_000185465.1-RS_2026_01_27 2026-01-27 1385 1319 42 22461550 GCF_000185485.1 PRJNA224116 SAMN00139437 AEQA00000000.1 na 525377 28035 Staphylococcus lugdunensis M23590 strain=M23590 na latest Scaffold Major Full 2011-01-14 ASM18548v1 Baylor College of Medicine GCA_000185485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/485/GCF_000185485.1_ASM18548v1/ na na na haploid bacteria 2523668 2520831 33.500000 0 8 23 NCBI RefSeq GCF_000185485.1-RS_2026_01_30 2026-01-30 2422 2306 66 na GCF_000185505.1 PRJNA224116 SAMN00260151 AEQN00000000.1 reference genome 887929 113287 Pseudoramibacter alactolyticus ATCC 23263 strain=ATCC 23263 na latest Scaffold Major Full 2011-01-14 ASM18550v1 Baylor College of Medicine GCA_000185505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/505/GCF_000185505.1_ASM18550v1/ na assembly from type material na haploid bacteria 2362882 2327229 51.500000 0 42 75 NCBI RefSeq GCF_000185505.1-RS_2026_04_14 2026-04-14 2326 2225 60 na GCF_000185585.1 PRJNA224116 SAMN02463765 ACTC00000000.1 na 457393 457393 Bacteroides sp. 4_1_36 strain=4_1_36 na latest Scaffold Major Full 2011-01-14 ASM18558v1 Broad Institute GCA_000185585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/585/GCF_000185585.1_ASM18558v1/ na na na haploid bacteria 4638757 4586082 46.500000 0 38 158 NCBI RefSeq GCF_000185585.1-RS_2024_08_13 2024-08-13 3861 3635 72 na GCF_000185605.1 PRJNA224116 SAMN02463790 ACWG00000000.1 na 665953 28111 Bacteroides eggerthii 1_2_48FAA strain=1_2_48FAA na latest Scaffold Major Full 2011-01-14 ASM18560v1 Broad Institute GCA_000185605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/605/GCF_000185605.1_ASM18560v1/ na na na haploid bacteria 4586481 4571407 44.500000 0 41 85 NCBI RefSeq GCF_000185605.1-RS_2025_12_16 2025-12-16 3936 3695 69 na GCF_000185625.1 PRJNA224116 SAMN02463797 ACWN00000000.1 na 665943 665943 Eggerthella sp. 1_3_56FAA strain=1_3_56FAA na latest Scaffold Major Full 2011-01-14 ASM18562v1 Broad Institute GCA_000185625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/625/GCF_000185625.1_ASM18562v1/ na na na haploid bacteria 3453272 3388691 64.000000 0 28 159 NCBI RefSeq GCF_000185625.1-RS_2024_08_13 2024-08-13 3055 2931 56 na GCF_000185645.1 PRJNA224116 SAMN02595332 ACRX00000000.1 na 562982 29391 Gemella morbillorum M424 strain=M424 na latest Scaffold Major Full 2011-01-14 ASM18564v1 Broad Institute GCA_000185645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/645/GCF_000185645.1_ASM18564v1/ na na na haploid bacteria 1752918 1745783 31.000000 0 18 39 NCBI RefSeq GCF_000185645.1-RS_2025_08_05 2025-08-05 1706 1626 53 na GCF_000185705.2 PRJNA224116 SAMN02463824 ADCP00000000.2 na 563192 35833 Bilophila wadsworthia 3_1_6 strain=3_1_6 na latest Scaffold Major Full 2013-06-21 Bilo_wads_3_1_6_V2 Broad Institute GCA_000185705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/705/GCF_000185705.2_Bilo_wads_3_1_6_V2/ na na na haploid bacteria 4391194 4391094 59.500000 0 4 5 NCBI RefSeq GCF_000185705.2-RS_2025_12_11 2025-12-11 3847 3735 82 na GCF_000185725.2 PRJNA224116 SAMN02463810 ACZI00000000.2 reference genome 679197 286804 Segniliparus rugosus ATCC BAA-974 strain=ATCC BAA-974 na latest Scaffold Major Full 2013-09-30 Segn_rugo_CDC_945_V2 Broad Institute GCA_000185725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/725/GCF_000185725.2_Segn_rugo_CDC_945_V2/ na assembly from type material na haploid bacteria 3587629 3587529 68.000000 0 2 3 NCBI RefSeq GCF_000185725.2-RS_2026_04_23 2026-04-23 3545 3397 54 22675588 GCF_000185745.1 PRJNA224116 SAMN02602972 na na 937774 29575 Taylorella equigenitalis MCE9 strain=MCE9 na latest Complete Genome Major Full 2011-01-07 ASM18574v1 Agence Nationale de Securite Sanitaire de l'alimentation, de l'environnement et du travail (Anses), Laboratoire de pathologie equine de Dozule, Goustranville, 14430 Dozule, France GCA_000185745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/745/GCF_000185745.1_ASM18574v1/ na na na haploid bacteria 1695860 1695860 37.500000 1 1 1 NCBI RefSeq GCF_000185745.1-RS_2025_09_19 2025-09-19 1589 1527 50 21278298 GCF_000185805.1 PRJNA224116 SAMN00713575 na reference genome 648996 228745 Thermovibrio ammonificans HB-1 strain=HB-1 na latest Complete Genome Major Full 2011-01-07 ASM18580v1 US DOE Joint Genome Institute GCA_000185805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/805/GCF_000185805.1_ASM18580v1/ na assembly from type material na haploid bacteria 1759526 1759526 52.000000 2 2 2 NCBI RefSeq GCF_000185805.1-RS_2026_05_05 2026-05-05 1891 1828 58 na GCF_000185845.1 PRJNA224116 SAMN00216886 AEQO00000000.1 na 888832 228604 Segatella salivae DSM 15606 strain=DSM 15606 na latest Scaffold Major Full 2011-01-14 ASM18584v1 Baylor College of Medicine GCA_000185845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/845/GCF_000185845.1_ASM18584v1/ na assembly from type material na haploid bacteria 3274581 3139809 41.500000 0 40 254 NCBI RefSeq GCF_000185845.1-RS_2026_01_23 2026-01-23 2660 2508 53 na GCF_000185885.1 PRJNA224116 SAMN02603958 na na 937773 283734 Staphylococcus pseudintermedius HKU10-03 strain=HKU10-03 na latest Complete Genome Major Full 2011-01-07 ASM18588v1 The University of Hong Kong GCA_000185885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/885/GCF_000185885.1_ASM18588v1/ na na na haploid bacteria 2617381 2617381 37.500000 1 1 1 NCBI RefSeq GCF_000185885.1-RS_2026_03_31 2026-03-31 2548 2419 82 21278300 GCF_000185905.1 PRJNA224116 SAMN00713576 na na 765698 39645 Mesorhizobium ciceri biovar biserrulae WSM1271 strain=WSM1271 na latest Complete Genome Major Full 2011-01-07 ASM18590v1 US DOE Joint Genome Institute GCA_000185905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/905/GCF_000185905.1_ASM18590v1/ na na na haploid bacteria 6690028 6690028 62.500000 2 2 2 NCBI RefSeq GCF_000185905.1-RS_2026_03_30 2026-03-30 6485 6295 62 na GCF_000185925.1 PRJNA224116 SAMN02469497 AEPN00000000.1 na 412597 412597 Paracoccus sp. TRP strain=TRP na latest Contig Major Full 2011-01-10 ASM18592v1 Graduate School, Chinese Academy of Agricultural Sciences (CAAS) GCA_000185925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/925/GCF_000185925.1_ASM18592v1/ na na na haploid bacteria 3915186 3915186 63.000000 0 119 119 NCBI RefSeq GCF_000185925.1-RS_2024_08_13 2024-08-13 3951 3818 54 21257769 GCF_000185945.1 PRJNA62089 SAMN03081419 na reference genome 367775 37769 Cryptococcus gattii WM276 strain=WM276 na latest Chromosome Major Full 2011-01-12 ASM18594v1 Canada's Michael Smith Genome Sciences Centre GCA_000185945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/945/GCF_000185945.1_ASM18594v1/ na na na haploid fungi 18374760 18361704 48.000000 14 14 21 Canada's Michael Smith Genome Sciences Centre Annotation submitted by Canada's Michael Smith Genome Sciences Centre 2023-04-14 6580 6565 0 21304167 GCF_000185965.1 PRJNA224116 SAMN00713577 na na 743721 314722 Pseudoxanthomonas suwonensis 11-1 strain=11-1 na latest Complete Genome Major Full 2011-01-12 ASM18596v1 US DOE Joint Genome Institute GCA_000185965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/965/GCF_000185965.1_ASM18596v1/ na na na haploid bacteria 3419049 3419049 70.000000 1 1 1 NCBI RefSeq GCF_000185965.1-RS_2025_05_20 2025-05-20 3175 3091 62 na GCF_000185985.2 PRJNA224116 SAMN02603466 na reference genome 859654 251535 Candidatus Blochmanniella vafra str. BVAF strain=BVAF na latest Complete Genome Major Full 2011-11-28 ASM18598v2 Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory GCA_000185985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/185/985/GCF_000185985.2_ASM18598v2/ na na na haploid bacteria 722585 722585 27.500000 1 1 1 NCBI RefSeq GCF_000185985.2-RS_2026_03_17 2026-03-17 634 585 42 21126349 GCF_000186005.1 PRJNA224116 SAMN02604339 na reference genome 943945 2115 Mycoplasmopsis fermentans M64 strain=M64 na latest Complete Genome Major Full 2011-01-13 ASM18600v1 Yang-Ming University GCA_000186005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/005/GCF_000186005.1_ASM18600v1/ na na na haploid bacteria 1118751 1118751 27.000000 1 1 1 NCBI RefSeq GCF_000186005.1-RS_2025_12_13 2025-12-13 1035 969 43 21642450 GCF_000186085.1 PRJNA224116 SAMN02469323 ABQL00000000.1 na 535026 1423 Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain=NCIB 3610 na latest Chromosome Major Full 2008-08-12 ASM18608v1 Baylor College of Medicine GCA_000186085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/085/GCF_000186085.1_ASM18608v1/ na assembly from type material na haploid bacteria 4292969 4292784 43.500000 2 80 84 NCBI RefSeq GCF_000186085.1-RS_2025_05_21 2025-05-21 4561 4239 122 18670626 GCF_000186125.1 PRJNA224116 SAMN02463786 ACWC00000000.1 na 665958 665958 Bacillus sp. BT1B_CT2 strain=BT1B_CT2 na latest Scaffold Major Full 2011-01-18 Bacillus_BT1B_CT2_V1 Broad Institute GCA_000186125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/125/GCF_000186125.1_Bacillus_BT1B_CT2_V1/ na na na haploid bacteria 4369552 4341829 45.500000 0 24 49 NCBI RefSeq GCF_000186125.1-RS_2025_08_25 2025-08-25 4608 4282 104 na GCF_000186165.1 PRJNA224116 SAMN02463751 ACRG00000000.1 na 435832 488 Neisseria mucosa C102 strain=C102 na latest Scaffold Major Full 2011-01-18 Neis_muco_C102_V1 Broad Institute GCA_000186165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/165/GCF_000186165.1_Neis_muco_C102_V1/ na na na haploid bacteria 2169437 2160730 49.500000 0 7 23 NCBI RefSeq GCF_000186165.1-RS_2025_05_21 2025-05-21 2084 1981 63 na GCF_000186185.1 PRJNA224116 SAMN02463749 ACRC00000000.1 na 562971 85698 Achromobacter xylosoxidans C54 strain=C54 na latest Scaffold Major Full 2011-01-18 Achr_xylo_C54_V2 Broad Institute GCA_000186185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/185/GCF_000186185.1_Achr_xylo_C54_V2/ na na na haploid bacteria 6514720 6294609 67.500000 0 262 728 NCBI RefSeq GCF_000186185.1-RS_2026_02_15 2026-02-15 6269 5966 67 na GCF_000186205.1 PRJNA224116 SAMN00138731 AENR00000000.1 na 764544 1282 Staphylococcus epidermidis FRI909 strain=FRI909 na latest Contig Major Full 2011-01-15 ASM18620v2 University at Buffalo/Center of Excellence/Infectious Disease and Genomics GCA_000186205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/205/GCF_000186205.1_ASM18620v2/ na na na haploid bacteria 2541845 2541845 32.000000 0 56 56 NCBI RefSeq GCF_000186205.1-RS_2026_03_20 2026-03-20 2477 2327 63 21317317 GCF_000186225.1 PRJNA224116 SAMN00138952 na reference genome 693979 290053 Bacteroides helcogenes P 36-108 strain=P 36-108 na latest Complete Genome Major Full 2011-01-18 ASM18622v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/225/GCF_000186225.1_ASM18622v1/ na assembly from type material na haploid bacteria 3998906 3998906 44.500000 1 1 1 NCBI RefSeq GCF_000186225.1-RS_2026_05_01 2026-05-01 3363 3214 85 21475586 GCF_000186245.1 PRJNA224116 SAMN00713578 na reference genome 749222 269261 Nitratifractor salsuginis DSM 16511 strain=DSM 16511 na latest Complete Genome Major Full 2011-01-18 ASM18624v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/245/GCF_000186245.1_ASM18624v1/ na assembly from type material na haploid bacteria 2101285 2101285 54.000000 1 1 1 NCBI RefSeq GCF_000186245.1-RS_2026_05_01 2026-05-01 2192 2121 54 21886859 GCF_000186265.1 PRJNA224116 SAMN00190054 na reference genome 688270 59600 Cellulophaga algicola DSM 14237 strain=DSM 14237 na latest Complete Genome Major Full 2011-01-18 ASM18626v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/265/GCF_000186265.1_ASM18626v1/ na assembly from type material na haploid bacteria 4888353 4888353 34.000000 1 1 1 NCBI RefSeq GCF_000186265.1-RS_2025_12_10 2025-12-10 4288 4191 63 21475589 GCF_000186345.1 PRJNA224116 SAMN00138929 na reference genome 575540 128 Isosphaera pallida ATCC 43644 strain=ATCC 43644 na latest Complete Genome Major Full 2011-01-20 ASM18634v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/345/GCF_000186345.1_ASM18634v1/ na assembly from type material na haploid bacteria 5529304 5529304 62.500000 2 2 2 NCBI RefSeq GCF_000186345.1-RS_2025_09_25 2025-09-25 3732 3652 60 21475588 GCF_000186365.1 PRJNA224116 SAMN00103627 na reference genome 765177 2275 Desulfurococcus mucosus DSM 2162 strain=DSM 2162 na latest Complete Genome Major Full 2011-01-20 ASM18636v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/365/GCF_000186365.1_ASM18636v1/ na assembly from type material na haploid archaea 1314639 1314639 53.000000 1 1 1 NCBI RefSeq GCF_000186365.1-RS_2026_05_01 2026-05-01 1419 1363 51 21677854 GCF_000186385.1 PRJNA224116 SAMN00713579 na reference genome 709986 309887 Deinococcus maricopensis DSM 21211 strain=DSM 21211 na latest Complete Genome Major Full 2011-01-20 ASM18638v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/385/GCF_000186385.1_ASM18638v1/ na assembly from type material na haploid bacteria 3498530 3498530 70.000000 1 1 1 NCBI RefSeq GCF_000186385.1-RS_2026_05_01 2026-05-01 3400 3313 70 21677853 GCF_000186405.1 PRJNA224116 SAMN02603326 na na 945704 1307 Streptococcus suis JS14 strain=JS14 na latest Complete Genome Major Full 2011-01-20 ASM18640v1 Huazhong Agricultural University, Wuhan, China GCA_000186405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/405/GCF_000186405.1_ASM18640v1/ na na na haploid bacteria 2137435 2137435 41.000000 1 1 1 NCBI RefSeq GCF_000186405.1-RS_2025_04_15 2025-04-15 2097 1922 78 21398551 GCF_000186425.1 PRJNA224116 SAMN00262616 AEQP00000000.1 na 887898 47671 Lautropia mirabilis ATCC 51599 strain=ATCC 51599 na latest Scaffold Major Full 2011-01-26 ASM18642v1 Baylor College of Medicine GCA_000186425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/425/GCF_000186425.1_ASM18642v1/ na assembly from type material na haploid bacteria 3151925 3137198 65.500000 0 8 30 NCBI RefSeq GCF_000186425.1-RS_2026_01_15 2026-01-15 2605 2520 46 na GCF_000186445.1 PRJNA224116 SAMN00217013 AEQQ00000000.1 na 888745 1311 Streptococcus agalactiae ATCC 13813 strain=ATCC 13813 na latest Scaffold Major Full 2011-01-26 ASM18644v1 Baylor College of Medicine GCA_000186445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/445/GCF_000186445.1_ASM18644v1/ na assembly from type material na haploid bacteria 2287892 2114958 35.500000 0 21 134 NCBI RefSeq GCF_000186445.1-RS_2025_05_16 2025-05-16 2159 2021 29 na GCF_000186465.1 PRJNA224116 SAMN00253300 AEQR00000000.1 na 888833 113107 Streptococcus australis ATCC 700641 strain=ATCC 700641 na latest Scaffold Major Full 2011-01-26 ASM18646v1 Baylor College of Medicine GCA_000186465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/465/GCF_000186465.1_ASM18646v1/ na assembly from type material na haploid bacteria 2129953 2107884 42.000000 0 6 21 NCBI RefSeq GCF_000186465.1-RS_2026_03_31 2026-03-31 2048 1946 53 na GCF_000186485.1 PRJNA224116 SAMN02471170 AENX00000000.1 na 914128 138074 Serratia symbiotica str. Tucson strain=Tucson na latest Scaffold Major Full 2011-01-25 ASM18648v1 The University of Arizona GCA_000186485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/485/GCF_000186485.1_ASM18648v1/ na na na haploid bacteria 2789218 2569435 52.000000 0 388 600 NCBI RefSeq GCF_000186485.1-RS_2025_06_20 2025-06-20 2819 1965 75 21266540 GCF_000186505.1 PRJNA224116 SAMN02463869 ADMF00000000.1 na 742821 40545 Sutterella wadsworthensis 3_1_45B strain=3_1_45B na latest Scaffold Major Full 2011-01-25 Sutt_wads_3_1_45B_V1 Broad Institute GCA_000186505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/505/GCF_000186505.1_Sutt_wads_3_1_45B_V1/ na na na haploid bacteria 2965437 2958117 55.000000 0 37 61 NCBI RefSeq GCF_000186505.1-RS_2026_02_08 2026-02-08 2533 2361 81 na GCF_000186545.1 PRJNA224116 SAMN02463868 ADME00000000.1 na 742820 1328 Streptococcus anginosus 1_2_62CV strain=1_2_62CV na latest Scaffold Major Full 2011-01-25 Strep_angi_1_2_62CV_V1 Broad Institute GCA_000186545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/545/GCF_000186545.1_Strep_angi_1_2_62CV_V1/ na na na haploid bacteria 1821055 1815537 39.000000 0 7 18 NCBI RefSeq GCF_000186545.1-RS_2026_01_30 2026-01-30 1841 1701 67 na GCF_000186585.1 PRJNA224116 SAMN02603666 na na 914127 672 Vibrio vulnificus MO6-24/O strain=MO6-24/O na latest Complete Genome Major Full 2011-01-24 ASM18658v1 National Research Laboratory of Molecular Microbiology and Toxicology, Center for Food Safety and Toxicology, Department of Food Science and Biotechnology, Seoul National University, Seoul 151-921, S. Korea. GCA_000186585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/585/GCF_000186585.1_ASM18658v1/ na na na haploid bacteria 5007768 5007768 47.000000 2 2 2 NCBI RefSeq GCF_000186585.1-RS_2025_09_05 2025-09-05 4518 4353 143 21317338 GCF_000186645.1 PRJNA224116 SAMN02470285 AERY00000000.1 na 945555 470 Acinetobacter baumannii WM99c strain=WM99c na latest Contig Major Full 2011-01-25 ASM18664v2 Macquarie University GCA_000186645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/645/GCF_000186645.1_ASM18664v2/ na na na haploid bacteria 4042799 4042799 39.000000 0 162 162 NCBI RefSeq GCF_000186645.1-RS_2025_04_23 2025-04-23 3980 3771 63 22092679 GCF_000186665.3 PRJNA224116 SAMN02603576 na na 945556 470 Acinetobacter baumannii D1279779 strain=D1279779 na latest Complete Genome Major Full 2014-09-30 ASM18666v4 Macquarie University GCA_000186665.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/665/GCF_000186665.3_ASM18666v4/ na na na haploid bacteria 3711700 3711700 39.000000 2 2 2 NCBI RefSeq GCF_000186665.3-RS_2025_04_24 2025-04-24 3577 3373 87 22092679;23527001;25883135 GCF_000186705.1 PRJNA224116 SAMN02471021 AEUE00000000.1 na 517722 517722 Citromicrobium sp. JLT1363 strain=JLT1363 na latest Contig Major Full 2011-01-25 ASM18670v1 State Key Laboratory of Marine Environmental Science, Xiamen University GCA_000186705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/705/GCF_000186705.1_ASM18670v1/ na na na haploid bacteria 3117324 3117324 65.000000 0 26 26 NCBI RefSeq GCF_000186705.1-RS_2025_08_27 2025-08-27 3027 2959 54 21317332 GCF_000186725.1 PRJNA224116 SAMN02603222 na na 547048 632 Yersinia pestis biovar Medievalis str. Harbin 35 strain=Harbin 35 na latest Complete Genome Major Full 2011-01-25 ASM18672v1 ERIC (Enteropathogen Resource Integration Center) GCA_000186725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/725/GCF_000186725.1_ASM18672v1/ na na na haploid bacteria 4709501 4709501 47.500000 4 4 4 NCBI RefSeq GCF_000186725.1-RS_2026_04_30 2026-04-30 4331 3935 105 na GCF_000186745.1 PRJNA224116 SAMN02603875 na na 936156 1423 Bacillus subtilis BSn5 strain=BSn5 na latest Complete Genome Major Full 2011-01-25 ASM18674v1 State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University GCA_000186745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/745/GCF_000186745.1_ASM18674v1/ na na na haploid bacteria 4093599 4093599 44.000000 1 1 1 NCBI RefSeq GCF_000186745.1-RS_2025_06_27 2025-06-27 4244 4018 119 21317323 GCF_000186885.1 PRJNA224116 SAMN00713581 na reference genome 577650 894 Desulfobulbus propionicus DSM 2032 strain=DSM 2032 na latest Complete Genome Major Full 2011-01-27 ASM18688v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000186885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/885/GCF_000186885.1_ASM18688v1/ na assembly from type material na haploid bacteria 3851869 3851869 59.000000 1 1 1 NCBI RefSeq GCF_000186885.1-RS_2026_05_07 2026-05-07 3445 3346 61 21475592 GCF_000186945.2 PRJNA224116 SAMN00189155 AECQ00000000.1 na 706433 102148 Solobacterium moorei F0204 strain=F0204 na latest Scaffold Major Full 2015-09-14 ASM18694v2 Washington University Genome Sequencing Center GCA_000186945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/945/GCF_000186945.2_ASM18694v2/ na na na haploid bacteria 2008072 2007527 37.000000 0 33 66 NCBI RefSeq GCF_000186945.2-RS_2025_08_25 2025-08-25 2020 1961 47 na GCF_000186965.1 PRJNA224116 SAMN00189094 AECW00000000.1 na 706439 706438 Actinomyces sp. oral taxon 171 str. F0337 strain=F0337 na latest Scaffold Major Full 2011-01-29 ASM18696v1 Washington University Genome Center GCA_000186965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/186/965/GCF_000186965.1_ASM18696v1/ na na na haploid bacteria 3006255 2993669 68.000000 0 280 580 NCBI RefSeq GCF_000186965.1-RS_2025_08_25 2025-08-25 2845 2585 56 na GCF_000187005.1 PRJNA224116 SAMN02603261 na na 743525 37636 Thermus scotoductus SA-01 strain=SA-01 na latest Complete Genome Major Full 2011-01-27 ASM18700v1 Georg-August-University Goettingen GCA_000187005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/005/GCF_000187005.1_ASM18700v1/ na na na haploid bacteria 2355186 2355186 65.000000 2 2 2 NCBI RefSeq GCF_000187005.1-RS_2025_08_14 2025-08-14 2505 2396 55 22115438 GCF_000187045.1 PRJNA224116 SAMN02471826 AEGG00000000.1 na 875329 29438 Pseudomonas savastanoi pv. glycinea str. B076 strain=B076 na latest Contig Major Full 2011-01-28 ASM18704v2 University of Illinois at Urbana & Champaign GCA_000187045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/045/GCF_000187045.1_ASM18704v2/ na na na haploid bacteria 6236653 6236653 58.000000 0 104 104 NCBI RefSeq GCF_000187045.1-RS_2026_04_16 2026-04-16 5805 5332 83 21304594 GCF_000187065.1 PRJNA224116 SAMN02471825 AEGH00000000.1 na 875330 29438 Pseudomonas savastanoi pv. glycinea str. race 4 strain=race 4 na latest Contig Major Full 2011-01-28 ASM18706v2 University of Illinois at Urbana & Champaign GCA_000187065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/065/GCF_000187065.1_ASM18706v2/ na na na haploid bacteria 5905212 5905212 58.000000 0 108 108 NCBI RefSeq GCF_000187065.1-RS_2025_08_06 2025-08-06 5487 5028 79 21304594 GCF_000187105.1 PRJNA224116 SAMN00189161 AEFH00000000.1 na 754027 162 Treponema phagedenis F0421 strain=F0421 na latest Scaffold Major Full 2011-01-29 ASM18710v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000187105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/105/GCF_000187105.1_ASM18710v1/ na na na haploid bacteria 2830421 2824327 40.000000 0 172 277 NCBI RefSeq GCF_000187105.1-RS_2025_07_04 2025-07-04 2434 2335 51 na GCF_000187125.1 PRJNA224116 SAMN00189154 AECV00000000.1 na 749551 671224 Centipeda artemidis F0399 strain=F0399 na latest Scaffold Major Full 2011-01-29 ASM18712v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000187125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/125/GCF_000187125.1_ASM18712v1/ na na na haploid bacteria 2210307 2209623 57.000000 0 34 66 NCBI RefSeq GCF_000187125.1-RS_2026_02_08 2026-02-08 2099 2022 60 na GCF_000187145.1 PRJNA224116 SAMN00189156 AECR00000000.1 na 754025 1280 Staphylococcus aureus subsp. aureus MRSA131 strain=MRSA131 na latest Scaffold Major Full 2011-01-29 ASM18714v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000187145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/145/GCF_000187145.1_ASM18714v1/ na na na haploid bacteria 2817572 2816661 32.500000 0 39 58 NCBI RefSeq GCF_000187145.1-RS_2026_03_09 2026-03-09 2830 2711 41 na GCF_000187165.1 PRJNA224116 SAMN00189157 AECP00000000.1 na 754026 1280 Staphylococcus aureus subsp. aureus MRSA177 strain=MRSA177 na latest Scaffold Major Full 2011-01-29 ASM18716v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000187165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/165/GCF_000187165.1_ASM18716v1/ na na na haploid bacteria 2826042 2825623 32.500000 0 47 66 NCBI RefSeq GCF_000187165.1-RS_2026_02_24 2026-02-24 2846 2726 41 na GCF_000187205.2 PRJNA224116 SAMN02603104 na na 889738 470 Acinetobacter baumannii MDR-TJ strain=MDR-TJ na latest Complete Genome Major Full 2013-03-11 ASM18720v4 Centre of Bioinformatics, Tianjin University, Tianjin 300072, China GCA_000187205.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/205/GCF_000187205.2_ASM18720v4/ na na na haploid bacteria 4153407 4153407 39.000000 3 3 3 NCBI RefSeq GCF_000187205.2-RS_2026_01_21 2026-01-21 4031 3834 97 21398552;22952140 GCF_000187225.1 PRJNA224116 SAMN02470763 AEMG00000000.1 na 797209 367189 Haladaptatus paucihalophilus DX253 strain=DX253 na latest Contig Major Full 2011-01-31 ASM18722v1 Oklahoma State University GCA_000187225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/225/GCF_000187225.1_ASM18722v1/ na assembly from type material na haploid archaea 4284805 4284805 62.000000 0 32 32 NCBI RefSeq GCF_000187225.1-RS_2025_12_02 2025-12-02 4398 4307 57 24048226 GCF_000187245.1 PRJNA264114 SAMN02981294 AEOI00000000.2 reference genome 871575 1005962 Ogataea parapolymorpha DL-1 strain=DL-1 na latest Chromosome Major Full 2013-12-20 Hansenula_2 Centre GCA_000187245.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/245/GCF_000187245.1_Hansenula_2/ na assembly from heterotypic synonym type material na haploid fungi 8874589 8870389 48.000000 7 7 10 Centre Annotation submitted by Centre 2023-12-29 5408 5325 83 24279325 GCF_000187265.1 PRJNA224116 SAMN00217012 AEVB00000000.1 na 525379 1335 Streptococcus equinus ATCC 9812 strain=ATCC 9812 na latest Scaffold Major Full 2011-02-03 ASM18726v1 Baylor College of Medicine GCA_000187265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/265/GCF_000187265.1_ASM18726v1/ na assembly from type material na haploid bacteria 1741734 1718633 37.500000 0 20 57 NCBI RefSeq GCF_000187265.1-RS_2026_05_16 2026-05-16 1754 1618 43 na GCF_000187285.1 PRJNA224116 SAMN02952912 AETX00000000.1 na 926026 562 Escherichia coli O157:H7 str. G5101 strain=G5101 na latest Contig Major Full 2012-03-15 ASM18728v4 FDA GCA_000187285.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/285/GCF_000187285.1_ASM18728v4/ na na na haploid bacteria 5061556 5061556 50.500000 1 217 217 NCBI RefSeq GCF_000187285.1-RS_2025_06_12 2025-06-12 5088 4620 115 21317333 GCF_000187305.2 PRJNA224116 SAMN02952913 AETY00000000.1 na 926027 562 Escherichia coli O157:H- str. 493-89 strain=493-89 na latest Contig Major Full 2020-01-15 ASM18730v3 FDA GCA_000187305.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/305/GCF_000187305.2_ASM18730v3/ na na na haploid bacteria 5176063 5176063 50.500000 1 205 205 NCBI RefSeq GCF_000187305.2-RS_2025_07_02 2025-07-02 5207 4764 112 21317333 GCF_000187325.2 PRJNA224116 SAMN02952914 AETZ00000000.1 na 926028 562 Escherichia coli O157:H- str. H 2687 strain=H 2687 na latest Contig Major Full 2020-01-15 ASM18732v3 FDA GCA_000187325.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/325/GCF_000187325.2_ASM18732v3/ na na na haploid bacteria 5169439 5169439 50.500000 1 210 210 NCBI RefSeq GCF_000187325.2-RS_2025_07_02 2025-07-02 5204 4750 114 21317333 GCF_000187345.1 PRJNA224116 SAMN02952915 AEUA00000000.1 na 926029 562 Escherichia coli O55:H7 str. 3256-97 strain=3256-97 TW 07815 na latest Contig Major Full 2011-01-31 ASM18734v2 FDA GCA_000187345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/345/GCF_000187345.1_ASM18734v2/ na na na haploid bacteria 5083624 5083624 50.500000 0 188 188 NCBI RefSeq GCF_000187345.1-RS_2025_06_08 2025-06-08 5109 4676 121 21317333 GCF_000187365.1 PRJNA224116 SAMN02952916 AEUB00000000.1 na 926030 562 Escherichia coli O55:H7 str. USDA 5905 strain=USDA 5905 na latest Contig Major Full 2011-01-31 ASM18736v2 FDA GCA_000187365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/365/GCF_000187365.1_ASM18736v2/ na na na haploid bacteria 5105283 5105283 50.500000 0 154 154 NCBI RefSeq GCF_000187365.1-RS_2025_04_26 2025-04-26 5100 4671 117 21317333 GCF_000187385.1 PRJNA224116 SAMN02952917 AEUC00000000.1 na 926032 562 Escherichia coli O157:H7 str. LSU-61 strain=LSU-61 na latest Contig Major Full 2011-01-31 ASM18738v2 FDA GCA_000187385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/385/GCF_000187385.1_ASM18738v2/ na na na haploid bacteria 5048276 5048276 50.500000 0 189 189 NCBI RefSeq GCF_000187385.1-RS_2025_06_13 2025-06-13 5045 4633 119 na GCF_000187425.2 PRJNA245140 SAMN02981260 ADNJ00000000.2 reference genome 655844 568076 Metarhizium robertsii ARSEF 23 strain=ARSEF 23 na latest Scaffold Major Full 2014-12-19 MAA 2.0 Metarhizium genome sequencing Consortium GCA_000187425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/425/GCF_000187425.2_MAA_2.0/ na na na haploid fungi 41656800 38960102 51.500000 0 90 941 Metarhizium genome sequencing Consortium Annotation submitted by Metarhizium genome sequencing Consortium 2023-12-29 11688 11688 0 21253567;25368161 GCF_000187445.1 PRJNA224116 SAMN02463753 ACRI00000000.1 na 435842 435842 Streptococcus sp. C150 strain=C150 na latest Scaffold Major Full 2011-02-03 ASM18744v1 Broad Institute GCA_000187445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/445/GCF_000187445.1_ASM18744v1/ na na na haploid bacteria 2142483 2124984 40.000000 0 21 60 NCBI RefSeq GCF_000187445.1-RS_2025_08_25 2025-08-25 2060 1916 78 na GCF_000187465.1 PRJNA224116 SAMN00216972 AEVD00000000.1 reference genome 889204 68892 Streptococcus infantis ATCC 700779 strain=ATCC 700779 na latest Scaffold Major Full 2011-02-03 ASM18746v1 Baylor College of Medicine GCA_000187465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/465/GCF_000187465.1_ASM18746v1/ na assembly from type material na haploid bacteria 1905984 1884302 39.000000 0 10 31 NCBI RefSeq GCF_000187465.1-RS_2026_04_01 2026-04-01 1959 1874 47 na GCF_000187505.1 PRJNA224116 SAMN00253299 AEVE00000000.1 na 888048 1318 Streptococcus parasanguinis ATCC 903 strain=ATCC 903 na latest Scaffold Major Full 2011-02-03 ASM18750v1 Baylor College of Medicine GCA_000187505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/505/GCF_000187505.1_ASM18750v1/ na na na haploid bacteria 2131530 2114592 42.000000 0 14 81 NCBI RefSeq GCF_000187505.1-RS_2026_01_30 2026-01-30 2047 1952 39 na GCF_000187565.1 PRJNA224116 SAMN02415256 AEJH00000000.1 na 904139 28901 Salmonella enterica subsp. enterica serovar Choleraesuis str. SCSA50 strain=SCSA50 A50 latest Chromosome Major Full 2011-02-08 ASM18756v1 Ark Genomics GCA_000187565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/565/GCF_000187565.1_ASM18756v1/ na na na haploid bacteria 4789937 4789206 52.000000 2 2 17 NCBI RefSeq GCF_000187565.1-RS_2025_02_11 2025-02-11 4716 4304 115 21478351 GCF_000187585.1 PRJNA224116 SAMN00253298 AEVF00000000.1 reference genome 888746 68891 Streptococcus peroris ATCC 700780 strain=ATCC 700780 na latest Scaffold Major Full 2011-02-03 ASM18758v1 Baylor College of Medicine GCA_000187585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/585/GCF_000187585.1_ASM18758v1/ na assembly from type material na haploid bacteria 1639920 1633153 39.000000 0 3 16 NCBI RefSeq GCF_000187585.1-RS_2026_04_23 2026-04-23 1654 1589 35 na GCF_000187605.1 PRJNA224116 SAMN02469775 ADHO00000000.1 na 710394 104628 Helicobacter suis HS5 strain=HS5 na latest Contig Major Full 2011-02-01 ASM18760v1 Ghent University, Faculty of Veterinary Medicine, Department of Pathology, Bacteriology and Avian Diseases GCA_000187605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/605/GCF_000187605.1_ASM18760v1/ na na na haploid bacteria 1669960 1669960 40.000000 0 319 319 NCBI RefSeq GCF_000187605.1-RS_2026_06_09 2026-06-09 1852 1663 47 21414191 GCF_000187645.1 PRJNA224116 SAMN02463754 ACRJ00000000.1 na 563036 563036 Streptococcus sp. C300 strain=C300 na latest Scaffold Major Full 2011-02-03 ASM18764v1 Broad Institute GCA_000187645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/645/GCF_000187645.1_ASM18764v1/ na na na haploid bacteria 2024600 2013728 41.000000 0 20 107 NCBI RefSeq GCF_000187645.1-RS_2025_08_25 2025-08-25 2018 1861 74 na GCF_000187665.3 PRJNA224116 SAMN02641593 ADZY00000000.3 na 741161 1464 Paenibacillus larvae subsp. larvae B-3650 strain=B-3650 na latest Contig Major Full 2017-09-29 ASM18766v4 Michael Smith Genome Sciences Centre GCA_000187665.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/665/GCF_000187665.3_ASM18766v4/ na na na haploid bacteria 4352378 4352378 44.000000 0 353 353 NCBI RefSeq GCF_000187665.3-RS_2026_04_05 2026-04-05 4789 4402 74 21923906 GCF_000187705.1 PRJNA224116 SAMN00713582 na reference genome 2703885 2703885 Rahnella aceris strain=Y9602 na latest Complete Genome Major Full 2011-02-02 ASM18770v1 US DOE Joint Genome Institute GCA_000187705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/705/GCF_000187705.1_ASM18770v1/ na na na haploid bacteria 5614252 5614252 52.000000 3 3 3 NCBI RefSeq GCF_000187705.1-RS_2026_02_06 2026-02-06 5247 5070 106 22461551 GCF_000187745.1 PRJNA224116 SAMN02463756 ACRL00000000.1 na 563038 563038 Streptococcus sp. M334 strain=M334 na latest Scaffold Major Full 2011-02-03 ASM18774v1 Broad Institute GCA_000187745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/745/GCF_000187745.1_ASM18774v1/ na na na haploid bacteria 2207013 2198283 39.000000 0 32 70 NCBI RefSeq GCF_000187745.1-RS_2025_02_17 2025-02-17 2196 2008 68 na GCF_000187855.1 PRJNA224116 SAMN00216974 AEVC00000000.1 na 889201 45634 Streptococcus cristatus ATCC 51100 strain=ATCC 51100 na latest Scaffold Major Full 2011-02-04 ASM18785v1 Baylor College of Medicine GCA_000187855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/855/GCF_000187855.1_ASM18785v1/ na assembly from type material na haploid bacteria 1982490 1963137 42.500000 0 5 28 NCBI RefSeq GCF_000187855.1-RS_2026_05_16 2026-05-16 1959 1871 51 na GCF_000187895.1 PRJNA224116 SAMN00000028 ABQC00000000.2 reference genome 484018 310297 Phocaeicola plebeius DSM 17135 strain=DSM 17135 na latest Scaffold Major Full 2010-09-09 ASM18789v1 Washington University Genome Sequencing Center GCA_000187895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/895/GCF_000187895.1_ASM18789v1/ na assembly from type material na haploid bacteria 4421924 4421324 44.500000 0 19 25 NCBI RefSeq GCF_000187895.1-RS_2026_01_08 2026-01-08 3693 3537 97 na GCF_000187935.1 PRJNA224116 SAMN02436555 AEUT00000000.2 reference genome 873447 1348 Streptococcus parauberis NCFD 2020 strain=NCFD 2020 na latest Complete Genome Major Full 2011-03-25 ASM18793v2 JCVI GCA_000187935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/935/GCF_000187935.1_ASM18793v2/ na assembly from type material na haploid bacteria 2164480 2164480 35.500000 1 1 1 NCBI RefSeq GCF_000187935.1-RS_2025_07_24 2025-07-24 2198 2077 77 na GCF_000187955.1 PRJNA224116 SAMN02436556 AEUU00000000.2 na 873448 1340 Streptococcus porcinus str. Jelinkova 176 strain=Jelinkova 176 na latest Contig Major Full 2011-05-06 ASM18795v2 JCVI GCA_000187955.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/955/GCF_000187955.1_ASM18795v2/ na na na haploid bacteria 2025881 2025881 37.000000 0 1 1 NCBI RefSeq GCF_000187955.1-RS_2026_04_04 2026-04-04 2014 1912 76 24625962 GCF_000187975.2 PRJNA224116 SAMN02436557 AEUV00000000.2 na 873449 1333 Streptococcus criceti HS-6 strain=HS-6 na latest Contig Major Full 2011-11-13 ASM18797v3 JCVI GCA_000187975.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/975/GCF_000187975.2_ASM18797v3/ na assembly from type material na haploid bacteria 2418558 2418558 42.000000 0 2 2 NCBI RefSeq GCF_000187975.2-RS_2026_03_30 2026-03-30 2245 2063 82 24625962 GCF_000187995.2 PRJNA224116 SAMN02436328 AEUW00000000.2 na 764298 1339 Streptococcus macacae NCTC 11558 strain=NCTC 11558 na latest Contig Major Full 2011-11-18 ASM18799v3 JCVI GCA_000187995.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/187/995/GCF_000187995.2_ASM18799v3/ na assembly from type material na haploid bacteria 1916985 1916985 38.000000 0 1 1 NCBI RefSeq GCF_000187995.2-RS_2026_01_23 2026-01-23 1898 1769 84 24625962 GCF_000188015.2 PRJNA224116 SAMN02436329 AEUX00000000.2 reference genome 764299 380397 Streptococcus ictaluri 707-05 strain=707-05 na latest Contig Major Full 2011-11-10 ASM18801v3 JCVI GCA_000188015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/015/GCF_000188015.2_ASM18801v3/ na assembly from type material na haploid bacteria 2234402 2234402 38.000000 0 8 8 NCBI RefSeq GCF_000188015.2-RS_2025_12_09 2025-12-09 2349 2018 58 24625962 GCF_000188035.1 PRJNA224116 SAMN02436558 AEUY00000000.2 na 875093 361101 Streptococcus pseudoporcinus LQ 940-04 strain=LQ 940-04 na latest Contig Major Full 2011-11-10 ASM18803v3 J. Craig Venter Institute GCA_000188035.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/035/GCF_000188035.1_ASM18803v3/ na assembly from type material na haploid bacteria 2126865 2126865 37.000000 0 5 5 NCBI RefSeq GCF_000188035.1-RS_2026_01_23 2026-01-23 2064 1916 76 24625962 GCF_000188055.2 PRJNA224116 SAMN02436559 AEUZ00000000.2 na 764291 149016 Streptococcus urinalis 2285-97 strain=2285-97 na latest Contig Major Full 2011-11-18 ASM18805v3 JCVI GCA_000188055.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/055/GCF_000188055.2_ASM18805v3/ na assembly from type material na haploid bacteria 2130431 2130431 34.000000 0 1 1 NCBI RefSeq GCF_000188055.2-RS_2025_08_18 2025-08-18 2232 2024 80 24625962 GCF_000188155.2 PRJNA224116 SAMN02256392 AEVM00000000.2 na 622637 622637 Methylocystis sp. ATCC 49242 strain=Rockwell na latest Scaffold Major Full 2013-06-07 ASM18815v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000188155.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/155/GCF_000188155.2_ASM18815v3/ na na na haploid bacteria 4726034 4725934 63.000000 0 6 7 NCBI RefSeq GCF_000188155.2-RS_2024_08_22 2024-08-22 4635 4409 63 21441518 GCF_000188175.1 PRJNA224116 SAMN00189153 AEVN00000000.1 na 626939 626940 Phascolarctobacterium succinatutens YIT 12067 strain=YIT 12067 na latest Scaffold Major Full 2011-02-08 ASM18817v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000188175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/175/GCF_000188175.1_ASM18817v1/ na assembly from type material na haploid bacteria 2121954 2121557 47.500000 0 96 118 NCBI RefSeq GCF_000188175.1-RS_2026_01_21 2026-01-21 2076 1985 53 na GCF_000188195.1 PRJNA224116 SAMN00189159 AEVO00000000.1 reference genome 762983 626938 Succinatimonas hippei YIT 12066 strain=YIT 12066 na latest Scaffold Major Full 2011-02-08 ASM18819v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000188195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/195/GCF_000188195.1_ASM18819v1/ na assembly from type material na haploid bacteria 2306546 2304990 40.500000 0 141 169 NCBI RefSeq GCF_000188195.1-RS_2025_12_02 2025-12-02 2112 2033 55 na GCF_000188215.1 PRJNA224116 SAMN02603494 na na 696749 470 Acinetobacter baumannii 1656-2 strain=1656-2 na latest Complete Genome Major Full 2011-02-08 ASM18821v1 Kyungpook National University GCA_000188215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/215/GCF_000188215.1_ASM18821v1/ na na na haploid bacteria 4023106 4023106 39.000000 3 3 3 NCBI RefSeq GCF_000188215.1-RS_2026_01_21 2026-01-21 3907 3709 94 22038960 GCF_000188255.1 PRJNA224116 SAMN00253301 AEVG00000000.1 reference genome 887324 723 Actinobacillus ureae ATCC 25976 strain=ATCC 25976 na latest Scaffold Major Full 2011-02-10 ASM18825v1 Baylor College of Medicine GCA_000188255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/255/GCF_000188255.1_ASM18825v1/ na assembly from type material na haploid bacteria 2354471 2295217 40.000000 0 27 182 NCBI RefSeq GCF_000188255.1-RS_2026_03_30 2026-03-30 2366 2074 60 na GCF_000188275.1 PRJNA224116 SAMN00253296 AEVH00000000.1 na 888825 1305 Streptococcus sanguinis VMC66 strain=VMC66 na latest Scaffold Major Full 2011-02-10 ASM18827v1 Baylor College of Medicine GCA_000188275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/275/GCF_000188275.1_ASM18827v1/ na na na haploid bacteria 2319451 2311181 43.500000 0 5 21 NCBI RefSeq GCF_000188275.1-RS_2026_03_27 2026-03-27 2267 2170 53 22189124 GCF_000188295.1 PRJNA224116 SAMN00253297 AEVI00000000.1 na 889206 1343 Streptococcus vestibularis ATCC 49124 strain=ATCC 49124 na latest Scaffold Major Full 2011-02-10 ASM18829v1 Baylor College of Medicine GCA_000188295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/295/GCF_000188295.1_ASM18829v1/ na assembly from type material na haploid bacteria 1872773 1841650 39.500000 0 21 102 NCBI RefSeq GCF_000188295.1-RS_2026_05_16 2026-05-16 1870 1705 30 na GCF_000188335.1 PRJNA224116 SAMN00710595 AESH00000000.1 na 745015 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 315996572 strain=315996572 FDA_2010_142_Pistachio-3 latest Contig Major Full 2011-02-08 ASM18833v2 FDA GCA_000188335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/335/GCF_000188335.1_ASM18833v2/ na na na haploid bacteria 4648994 4648994 52.000000 0 50 50 NCBI RefSeq GCF_000188335.1-RS_2025_05_24 2025-05-24 4545 4276 88 21345093 GCF_000188355.1 PRJNA224116 SAMN00710606 AESI00000000.1 na 745017 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1 strain=495297-1 FDA_2010_144_Black Pepper-6 latest Contig Major Full 2011-02-08 ASM18835v2 FDA GCA_000188355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/355/GCF_000188355.1_ASM18835v2/ na na na haploid bacteria 4648761 4648761 52.000000 0 51 51 NCBI RefSeq GCF_000188355.1-RS_2025_05_24 2025-05-24 4541 4275 86 21345093 GCF_000188375.1 PRJNA224116 SAMN00710617 AESJ00000000.1 na 745018 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3 strain=495297-3 FDA_2010_145_Black Pepper-5 latest Contig Major Full 2011-02-08 ASM18837v2 FDA GCA_000188375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/375/GCF_000188375.1_ASM18837v2/ na na na haploid bacteria 4648694 4648694 52.000000 0 39 39 NCBI RefSeq GCF_000188375.1-RS_2025_05_24 2025-05-24 4529 4293 82 21345093 GCF_000188395.1 PRJNA224116 SAMN00710624 AESK00000000.1 na 745019 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4 strain=495297-4 FDA_2010_146_Black Pepper-7 latest Contig Major Full 2011-02-08 ASM18839v2 FDA GCA_000188395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/395/GCF_000188395.1_ASM18839v2/ na na na haploid bacteria 4649370 4649370 52.000000 0 44 44 NCBI RefSeq GCF_000188395.1-RS_2025_05_24 2025-05-24 4536 4284 83 21345093 GCF_000188415.1 PRJNA224116 SAMN00710625 AESL00000000.1 na 745020 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1 strain=515920-1 FDA_2010_147_Black Pepper-3 latest Contig Major Full 2011-02-08 ASM18841v2 FDA GCA_000188415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/415/GCF_000188415.1_ASM18841v2/ na na na haploid bacteria 4650678 4650678 52.000000 0 39 39 NCBI RefSeq GCF_000188415.1-RS_2025_06_01 2025-06-01 4527 4286 84 21345093 GCF_000188435.1 PRJNA224116 SAMN00710626 AESM00000000.1 na 745021 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2 strain=515920-2 FDA_2010_148_Black Pepper-4 latest Contig Major Full 2011-02-08 ASM18843v2 FDA GCA_000188435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/435/GCF_000188435.1_ASM18843v2/ na na na haploid bacteria 4651513 4651513 52.000000 0 34 34 NCBI RefSeq GCF_000188435.1-RS_2025_01_30 2025-01-30 4528 4291 85 21345093 GCF_000188455.1 PRJNA224116 SAMN00710627 AESN00000000.1 na 745022 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 531954 strain=531954 FDA_2010_149_Pistachio-2 latest Contig Major Full 2011-02-08 ASM18845v2 FDA GCA_000188455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/455/GCF_000188455.1_ASM18845v2/ na na na haploid bacteria 4324453 4324453 52.500000 0 132 132 NCBI RefSeq GCF_000188455.1-RS_2025_05_24 2025-05-24 4251 3954 118 21345093 GCF_000188475.1 PRJNA224116 SAMN00710628 AESO00000000.1 na 749949 28901 Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054 strain=NC_MB110209-0054 FDA_2010_155_Clinical-NC-5 latest Contig Major Full 2011-02-08 ASM18847v2 FDA GCA_000188475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/475/GCF_000188475.1_ASM18847v2/ na na na haploid bacteria 4650976 4650976 52.000000 0 89 89 NCBI RefSeq GCF_000188475.1-RS_2025_05_24 2025-05-24 4552 4245 69 21345093 GCF_000188515.1 PRJNA224116 SAMN00710596 AESQ00000000.1 na 749951 28901 Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965 strain=CASC_09SCPH15965 FDA_2010_157_Clinical-CA latest Contig Major Full 2011-02-08 ASM18851v2 FDA GCA_000188515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/515/GCF_000188515.1_ASM18851v2/ na na na haploid bacteria 4742895 4742895 52.000000 0 69 69 NCBI RefSeq GCF_000188515.1-RS_2025_02_24 2025-02-24 4662 4381 75 21345093 GCF_000188535.1 PRJNA224116 SAMN00710598 AESV00000000.1 na 763919 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 19N strain=19N FDA_2010_204_Chicken latest Contig Major Full 2011-02-08 ASM18853v2 FDA GCA_000188535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/535/GCF_000188535.1_ASM18853v2/ na na na haploid bacteria 4646453 4646453 52.000000 0 60 60 NCBI RefSeq GCF_000188535.1-RS_2025_02_04 2025-02-04 4536 4283 78 22260654 GCF_000188555.1 PRJNA224116 SAMN00710599 AESZ00000000.1 na 766762 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01 strain=81038-01 na latest Contig Major Full 2011-02-08 ASM18855v2 FDA GCA_000188555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/555/GCF_000188555.1_ASM18855v2/ na na na haploid bacteria 4650173 4650173 52.000000 0 39 39 NCBI RefSeq GCF_000188555.1-RS_2025_05_24 2025-05-24 4528 4287 79 21345093 GCF_000188575.1 PRJNA224116 SAMN00710597 AETA00000000.1 na 789332 28901 Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507 strain=MD_MDA09249507 na latest Contig Major Full 2011-02-08 ASM18857v2 FDA GCA_000188575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/575/GCF_000188575.1_ASM18857v2/ na na na haploid bacteria 4648724 4648724 52.000000 0 44 44 NCBI RefSeq GCF_000188575.1-RS_2025_06_01 2025-06-01 4529 4288 84 21345093 GCF_000188595.1 PRJNA224116 SAMN00710600 AETB00000000.1 na 858313 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 414877 strain=414877 FDA_2010_210_Mozzarella latest Contig Major Full 2011-02-08 ASM18859v2 FDA GCA_000188595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/595/GCF_000188595.1_ASM18859v2/ na na na haploid bacteria 4651384 4651384 52.000000 0 46 46 NCBI RefSeq GCF_000188595.1-RS_2025_02_11 2025-02-11 4523 4282 79 21345093 GCF_000188615.1 PRJNA224116 SAMN00710601 AETC00000000.1 na 858314 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 366867 strain=366867 FDA_2010_211_Perch latest Contig Major Full 2011-02-08 ASM18861v2 FDA GCA_000188615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/615/GCF_000188615.1_ASM18861v2/ na na na haploid bacteria 4660054 4660054 52.000000 0 37 37 NCBI RefSeq GCF_000188615.1-RS_2025_02_24 2025-02-24 4535 4291 82 21345093 GCF_000188635.1 PRJNA224116 SAMN00710602 AETD00000000.1 na 858315 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 413180 strain=413180 FDA_2010_212_Sea Trout latest Contig Major Full 2011-02-08 ASM18863v2 FDA GCA_000188635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/635/GCF_000188635.1_ASM18863v2/ na na na haploid bacteria 4652881 4652881 52.000000 0 38 38 NCBI RefSeq GCF_000188635.1-RS_2025_02_10 2025-02-10 4527 4285 84 21345093 GCF_000188655.1 PRJNA224116 SAMN00710603 AETE00000000.1 na 858316 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 446600 strain=446600 FDA_2010_213_King Fish latest Contig Major Full 2011-02-08 ASM18865v2 FDA GCA_000188655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/655/GCF_000188655.1_ASM18865v2/ na na na haploid bacteria 4648764 4648764 52.000000 0 47 47 NCBI RefSeq GCF_000188655.1-RS_2025_02_11 2025-02-11 4526 4274 85 21345093 GCF_000188735.1 PRJNA224116 SAMN02602988 na na 909946 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 strain=ST4/74 na latest Complete Genome Major Full 2011-02-10 ASM18873v1 Ark Genomics GCA_000188735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/735/GCF_000188735.1_ASM18873v1/ na na na haploid bacteria 5067451 5067451 52.000000 4 4 4 NCBI RefSeq GCF_000188735.1-RS_2025_03_23 2025-03-23 4991 4732 123 21478351 GCF_000188775.1 PRJNA224116 SAMN00792452 ADUO00000000.1 na 670894 562 Escherichia coli E128010 strain=E128010 na latest Contig Major Full 2011-02-10 ASM18877v2 Institute for Genome Sciences GCA_000188775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/775/GCF_000188775.1_ASM18877v2/ na na na haploid bacteria 5221267 5221267 50.500000 0 284 284 NCBI RefSeq GCF_000188775.1-RS_2025_06_13 2025-06-13 5557 4908 123 na GCF_000188835.1 PRJNA224116 SAMN00792455 ADUQ00000000.1 na 670904 562 Escherichia coli OK1180 strain=OK1180 na latest Contig Major Full 2011-02-10 ASM18883v2 Institute for Genome Sciences GCA_000188835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/835/GCF_000188835.1_ASM18883v2/ na na na haploid bacteria 5554557 5554557 50.500000 0 86 86 NCBI RefSeq GCF_000188835.1-RS_2025_06_13 2025-06-13 5775 5129 146 na GCF_000188855.1 PRJNA224116 SAMN00792456 ADUR00000000.1 na 670905 562 Escherichia coli OK1357 strain=OK1357 na latest Contig Major Full 2011-02-10 ASM18885v2 Institute for Genome Sciences GCA_000188855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/855/GCF_000188855.1_ASM18885v2/ na na na haploid bacteria 5277070 5277070 50.500000 0 180 180 NCBI RefSeq GCF_000188855.1-RS_2025_06_13 2025-06-13 5328 4879 125 na GCF_000188875.1 PRJNA224116 SAMN00792454 ADUS00000000.1 na 670899 562 Escherichia coli RN587/1 strain=RN587/1 na latest Contig Major Full 2011-02-10 ASM18887v2 Institute for Genome Sciences GCA_000188875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/875/GCF_000188875.1_ASM18887v2/ na na na haploid bacteria 5061577 5061577 50.500000 0 73 73 NCBI RefSeq GCF_000188875.1-RS_2025_04_26 2025-04-26 5160 4737 117 23868135 GCF_000188895.1 PRJNA224116 SAMN00710604 AETF00000000.1 na 858317 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1 strain=609458-1 FDA_2010_214_Black Pepper-1 latest Contig Major Full 2011-02-10 ASM18889v2 FDA GCA_000188895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/895/GCF_000188895.1_ASM18889v2/ na na na haploid bacteria 4643505 4643505 52.000000 0 98 98 NCBI RefSeq GCF_000188895.1-RS_2025_02_11 2025-02-11 4544 4295 73 21345093 GCF_000188915.1 PRJNA224116 SAMN00710605 AETG00000000.1 na 858318 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1 strain=556150-1 FDA_2010_215_Red Pepper-2 latest Contig Major Full 2011-02-10 ASM18891v2 FDA GCA_000188915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/915/GCF_000188915.1_ASM18891v2/ na na na haploid bacteria 4643399 4643399 52.000000 0 83 83 NCBI RefSeq GCF_000188915.1-RS_2025_02_11 2025-02-11 4539 4274 78 21345093 GCF_000188935.1 PRJNA224116 SAMN00710607 AETH00000000.1 na 859198 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 609460 strain=609460 FDA_2010_216_Black Pepper-2 latest Contig Major Full 2011-02-10 ASM18893v2 FDA GCA_000188935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/935/GCF_000188935.1_ASM18893v2/ na na na haploid bacteria 4645673 4645673 52.000000 0 95 95 NCBI RefSeq GCF_000188935.1-RS_2025_02_24 2025-02-24 4553 4260 81 21345093 GCF_000188955.2 PRJNA224116 SAMN00710608 na na 859199 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20 strain=507440-20 na latest Complete Genome Major Full 2014-04-04 ASM18895v5 FDA GCA_000188955.5 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/955/GCF_000188955.2_ASM18895v5/ na na na haploid bacteria 4694375 4694375 52.000000 1 1 1 NCBI RefSeq GCF_000188955.2-RS_2025_02_20 2025-02-20 4560 4295 124 21345093 GCF_000188975.1 PRJNA224116 SAMN00710609 AETJ00000000.1 na 871586 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 556152 strain=556152 FDA_2010_219_Red Pepper-1 latest Contig Major Full 2011-02-10 ASM18897v2 FDA GCA_000188975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/975/GCF_000188975.1_ASM18897v2/ na na na haploid bacteria 4635895 4635895 52.000000 0 173 173 NCBI RefSeq GCF_000188975.1-RS_2025_02_11 2025-02-11 4599 4218 75 21345093 GCF_000188995.1 PRJNA224116 SAMN00710610 AETK00000000.1 na 871587 28901 Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077 strain=MB101509-0077 FDA_2010_220_Clinical-NC-3 latest Contig Major Full 2011-02-10 ASM18899v2 FDA GCA_000188995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/188/995/GCF_000188995.1_ASM18899v2/ na na na haploid bacteria 4647734 4647734 52.000000 0 52 52 NCBI RefSeq GCF_000188995.1-RS_2025_02_11 2025-02-11 4523 4260 82 21345093 GCF_000189015.1 PRJNA224116 SAMN00710611 AETL00000000.1 na 871588 28901 Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047 strain=MB102109-0047 FDA_2010_221_Clinical-NC-2 latest Contig Major Full 2011-02-10 ASM18901v2 FDA GCA_000189015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/015/GCF_000189015.1_ASM18901v2/ na na na haploid bacteria 4634177 4634177 52.000000 0 185 185 NCBI RefSeq GCF_000189015.1-RS_2025_02_25 2025-02-25 4613 4232 77 21345093 GCF_000189055.1 PRJNA224116 SAMN00710613 AETN00000000.1 na 871590 28901 Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052 strain=MB111609-0052 FDA_2010_223_Clinical-NC-1 latest Contig Major Full 2011-02-10 ASM18905v2 FDA GCA_000189055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/055/GCF_000189055.1_ASM18905v2/ na na na haploid bacteria 4650993 4650993 52.000000 0 32 32 NCBI RefSeq GCF_000189055.1-RS_2025_02_11 2025-02-11 4532 4285 91 21345093 GCF_000189075.1 PRJNA224116 SAMN00710614 AETO00000000.1 na 871591 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312 strain=2009083312 FDA_2010_224_Clinical-OH-2 latest Contig Major Full 2011-02-10 ASM18907v2 FDA GCA_000189075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/075/GCF_000189075.1_ASM18907v2/ na na na haploid bacteria 4651619 4651619 52.000000 0 30 30 NCBI RefSeq GCF_000189075.1-RS_2025_02_19 2025-02-19 4527 4288 90 21345093 GCF_000189095.1 PRJNA224116 SAMN00710615 AETP00000000.1 na 871592 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258 strain=2009085258 FDA_2010_225_Clinical-OH-1 latest Contig Major Full 2011-02-10 ASM18909v2 FDA GCA_000189095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/095/GCF_000189095.1_ASM18909v2/ na na na haploid bacteria 4650694 4650694 52.000000 0 34 34 NCBI RefSeq GCF_000189095.1-RS_2025_02_10 2025-02-10 4523 4290 88 21345093 GCF_000189115.1 PRJNA224116 SAMN00710616 AETQ00000000.1 na 871593 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 315731156 strain=315731156 FDA_2010_227_Pistachio-1 latest Contig Major Full 2011-02-10 ASM18911v2 FDA GCA_000189115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/115/GCF_000189115.1_ASM18911v2/ na na na haploid bacteria 4650602 4650602 52.000000 0 40 40 NCBI RefSeq GCF_000189115.1-RS_2025_02_24 2025-02-24 4530 4276 85 21345093 GCF_000189135.1 PRJNA224116 SAMN00710618 AETR00000000.1 na 882863 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199 strain=IA_2009159199 FDA_2010_236_Clinical-IA-1 latest Contig Major Full 2011-02-10 ASM18913v2 FDA GCA_000189135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/135/GCF_000189135.1_ASM18913v2/ na na na haploid bacteria 4643237 4643237 52.000000 0 103 103 NCBI RefSeq GCF_000189135.1-RS_2025_02_11 2025-02-11 4562 4251 79 21345093 GCF_000189155.1 PRJNA224116 SAMN00710619 AETS00000000.1 na 882864 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282 strain=IA_2010008282 na latest Contig Major Full 2011-02-10 ASM18915v2 FDA GCA_000189155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/155/GCF_000189155.1_ASM18915v2/ na na na haploid bacteria 4645010 4645010 52.000000 0 81 81 NCBI RefSeq GCF_000189155.1-RS_2025_05_24 2025-05-24 4552 4270 79 21345093 GCF_000189175.1 PRJNA224116 SAMN00710620 AETT00000000.1 na 882865 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283 strain=IA_2010008283 FDA_2010_238_Lunch Meat-IA-3 latest Contig Major Full 2011-02-10 ASM18917v2 FDA GCA_000189175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/175/GCF_000189175.1_ASM18917v2/ na na na haploid bacteria 4638469 4638469 52.000000 0 165 165 NCBI RefSeq GCF_000189175.1-RS_2025_02_11 2025-02-11 4606 4260 73 21345093 GCF_000189195.1 PRJNA224116 SAMN00710621 AETU00000000.1 na 882866 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284 strain=IA_2010008284 FDA_2010_239_Lunch Meat-IA-2 latest Contig Major Full 2011-02-10 ASM18919v2 FDA GCA_000189195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/195/GCF_000189195.1_ASM18919v2/ na na na haploid bacteria 4642480 4642480 52.000000 0 123 123 NCBI RefSeq GCF_000189195.1-RS_2025_02_11 2025-02-11 4571 4274 77 21345093 GCF_000189215.1 PRJNA224116 SAMN00710622 AETV00000000.1 na 882867 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285 strain=IA_2010008285 FDA_2010_240_Lunch Meat-IA-4 latest Contig Major Full 2011-02-10 ASM18921v2 FDA GCA_000189215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/215/GCF_000189215.1_ASM18921v2/ na na na haploid bacteria 4648681 4648681 52.000000 0 42 42 NCBI RefSeq GCF_000189215.1-RS_2025_02_25 2025-02-25 4528 4277 82 21345093 GCF_000189235.1 PRJNA224116 SAMN00710623 AETW00000000.1 na 882869 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287 strain=IA_2010008287 FDA_2010_242_Lunch Meat-IA-5 latest Contig Major Full 2011-02-10 ASM18923v2 FDA GCA_000189235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/235/GCF_000189235.1_ASM18923v2/ na na na haploid bacteria 4645653 4645653 52.000000 0 70 70 NCBI RefSeq GCF_000189235.1-RS_2025_02_10 2025-02-10 4541 4274 77 21345093 GCF_000189255.1 PRJNA224116 SAMN02952918 AEVS00000000.1 reference genome 945543 170652 Vibrio brasiliensis LMG 20546 strain=LMG 20546 na latest Contig Major Full 2011-02-11 ASM18925v1 FDA GCA_000189255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/255/GCF_000189255.1_ASM18925v1/ na assembly from type material na haploid bacteria 4715026 4715026 46.000000 0 116 116 NCBI RefSeq GCF_000189255.1-RS_2026_03_31 2026-03-31 4352 4240 63 21930677 GCF_000189275.1 PRJNA224116 SAMN02952919 AEVT00000000.1 na 945550 379097 Vibrio sinaloensis DSM 21326 strain=DSM 21326 na latest Contig Major Full 2011-02-11 ASM18927v1 FDA GCA_000189275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/275/GCF_000189275.1_ASM18927v1/ na na na haploid bacteria 4904906 4904906 46.000000 0 135 135 NCBI RefSeq GCF_000189275.1-RS_2025_12_22 2025-12-22 4558 4446 61 21930677 GCF_000189295.2 PRJNA224116 SAMN02232015 na reference genome 641491 641491 Pseudodesulfovibrio mercurii strain=ND132 na latest Complete Genome Major Full 2011-12-29 ASM18929v2 US DOE Joint Genome Institute GCA_000189295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/295/GCF_000189295.2_ASM18929v2/ na assembly from type material na haploid bacteria 3858580 3858580 65.000000 1 1 1 NCBI RefSeq GCF_000189295.2-RS_2026_03_27 2026-03-27 3545 3468 67 21357488 GCF_000189395.1 PRJNA224116 SAMN02471613 AEPB00000000.1 na 933115 414778 Planococcus donghaensis MPA1U2 strain=MPA1U2 na latest Contig Major Full 2011-02-14 ASM18939v1 UCSC GCA_000189395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/395/GCF_000189395.1_ASM18939v1/ na na na haploid bacteria 3303464 3303464 39.500000 0 65 65 NCBI RefSeq GCF_000189395.1-RS_2026_03_23 2026-03-23 3286 3182 68 21994932 GCF_000189415.1 PRJNA224116 SAMN00713585 na na 865938 1014 Weeksella virosa DSM 16922 strain=DSM 16922 na latest Complete Genome Major Full 2011-02-15 ASM18941v1 JGI GCA_000189415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/415/GCF_000189415.1_ASM18941v1/ na assembly from type material na haploid bacteria 2272954 2272954 36.000000 1 1 1 NCBI RefSeq GCF_000189415.1-RS_2025_09_25 2025-09-25 2185 2086 77 21475590 GCF_000189455.2 PRJNA224116 SAMN02469934 na na 948563 1280 Staphylococcus aureus O46 strain=O46 na latest Complete Genome Major Full 2017-12-20 ASM18945v3 INRA GCA_000189455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/455/GCF_000189455.2_ASM18945v3/ na na na haploid bacteria 2791410 2791410 33.000000 1 1 1 NCBI RefSeq GCF_000189455.2-RS_2025_04_19 2025-04-19 2751 2583 66 21398544 GCF_000189495.1 PRJNA224116 SAMN02604167 na na 984892 283734 Staphylococcus pseudintermedius ED99 strain=ED99 na latest Complete Genome Major Full 2011-02-16 ASM18949v1 University of Edinburgh GCA_000189495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/495/GCF_000189495.1_ASM18949v1/ na na na haploid bacteria 2572216 2572216 37.500000 1 1 1 NCBI RefSeq GCF_000189495.1-RS_2026_04_03 2026-04-03 2428 2297 78 21398539 GCF_000189515.1 PRJNA224116 SAMN02603939 na na 767462 1587 Lactobacillus helveticus H10 strain=H10 na latest Complete Genome Major Full 2011-02-16 ASM18951v1 The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China GCA_000189515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/515/GCF_000189515.1_ASM18951v1/ na na na haploid bacteria 2172383 2172383 37.000000 2 2 2 NCBI RefSeq GCF_000189515.1-RS_2026_03_27 2026-03-27 2270 1962 78 21398542 GCF_000189535.1 PRJNA224116 SAMN00710681 na na 930171 361575 Pseudarthrobacter phenanthrenivorans Sphe3 strain=Sphe3 na latest Complete Genome Major Full 2011-02-16 ASM18953v1 US DOE Joint Genome Institute GCA_000189535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/535/GCF_000189535.1_ASM18953v1/ na assembly from type material na haploid bacteria 4535320 4535320 65.500000 3 3 3 NCBI RefSeq GCF_000189535.1-RS_2025_12_23 2025-12-23 4297 4131 65 21677849 GCF_000189555.1 PRJNA224116 SAMN02603882 na na 930945 43080 Saccharolobus islandicus REY15A strain=REY15A na latest Complete Genome Major Full 2011-02-16 ASM18955v1 State Key Laboratory of Microbial Resources, Institute of Microbiology, CAS, Beijing, P. R. China GCA_000189555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/555/GCF_000189555.1_ASM18955v1/ na na na haploid archaea 2522992 2522992 35.500000 1 1 1 NCBI RefSeq GCF_000189555.1-RS_2025_12_22 2025-12-22 2820 2578 51 21278296 GCF_000189575.1 PRJNA224116 SAMN02602983 na na 930943 43080 Saccharolobus islandicus HVE10/4 strain=HVE10/4 na latest Complete Genome Major Full 2011-02-16 ASM18957v1 Archaea Centre, Department of Biology, University of Copenhagen, 2200 Copenhagen N, Denmark GCA_000189575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/575/GCF_000189575.1_ASM18957v1/ na na na haploid archaea 2655201 2655201 35.000000 1 1 1 NCBI RefSeq GCF_000189575.1-RS_2025_12_22 2025-12-22 2948 2715 51 21278296 GCF_000189595.1 PRJNA224116 SAMN02463857 ADLQ00000000.1 na 742740 1512 [Clostridium] symbiosum WAL-14163 strain=WAL-14163 na latest Scaffold Major Full 2011-02-23 Clos_symb_WAL_14163_V1 Broad Institute GCA_000189595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/595/GCF_000189595.1_Clos_symb_WAL_14163_V1/ na na na haploid bacteria 5352498 5312064 47.500000 0 52 142 NCBI RefSeq GCF_000189595.1-RS_2026_02_27 2026-02-27 4912 4693 82 na GCF_000189615.1 PRJNA224116 SAMN02463858 ADLR00000000.1 na 742741 1512 [Clostridium] symbiosum WAL-14673 strain=WAL-14673 na latest Scaffold Major Full 2011-02-23 Clos_symb_WAL_14673_V2 Broad Institute GCA_000189615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/615/GCF_000189615.1_Clos_symb_WAL_14673_V2/ na na na haploid bacteria 4916964 4857801 48.000000 0 55 195 NCBI RefSeq GCF_000189615.1-RS_2025_08_07 2025-08-07 4391 4107 82 na GCF_000189655.1 PRJNA224116 SAMN02471594 AEOX00000000.1 na 886886 470 Acinetobacter baumannii AB210 strain=AB210 na latest Contig Major Full 2011-02-17 ASM18965v2 University of Birmingham GCA_000189655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/655/GCF_000189655.1_ASM18965v2/ na na na haploid bacteria 4061440 4061440 39.000000 0 106 106 NCBI RefSeq GCF_000189655.1-RS_2026_02_05 2026-02-05 4020 3812 81 21565804 GCF_000189675.1 PRJNA224116 SAMN02471598 AEOY00000000.1 na 886888 470 Acinetobacter baumannii 3990 strain=3990 na latest Contig Major Full 2011-02-17 ASM18967v2 University of Birmingham GCA_000189675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/675/GCF_000189675.1_ASM18967v2/ na na na haploid bacteria 4015011 4015011 39.000000 2 96 96 NCBI RefSeq GCF_000189675.1-RS_2026_01_22 2026-01-22 3915 3731 61 21398548 GCF_000189755.2 PRJNA224116 SAMN02441786 AEVP00000000.2 na 696369 1565 Desulfotomaculum nigrificans DSM 574 strain=DSM 574 na latest Scaffold Major Full 2014-01-16 ASM18975v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000189755.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/755/GCF_000189755.2_ASM18975v3/ na assembly from type material na haploid bacteria 3052787 3052187 46.500000 0 1 7 NCBI RefSeq GCF_000189755.2-RS_2026_04_07 2026-04-07 3096 2947 92 na GCF_000189775.2 PRJNA224116 SAMN00204087 na reference genome 858215 29329 Thermoanaerobacterium xylanolyticum LX-11 strain=LX-11 na latest Complete Genome Major Full 2011-05-17 ASM18977v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000189775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/775/GCF_000189775.2_ASM18977v3/ na assembly from type material na haploid bacteria 2534358 2534358 35.000000 1 1 1 NCBI RefSeq GCF_000189775.2-RS_2026_06_10 2026-06-10 2500 2382 77 na GCF_000189795.1 PRJNA224116 SAMN02436678 AEKU00000000.1 na 911116 2173 Methanobrevibacter smithii TS145A strain=TS145A na latest Contig Major Full 2011-02-17 ASM18979v2 Washington University in St.Louis GCA_000189795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/795/GCF_000189795.1_ASM18979v2/ na na na haploid archaea 1782572 1782572 31.000000 0 44 44 NCBI RefSeq GCF_000189795.1-RS_2025_12_14 2025-12-14 1783 1633 40 21317366 GCF_000189895.1 PRJNA224116 SAMN02436666 AELP00000000.1 na 911121 2173 Methanobrevibacter smithii TS146D strain=TS146D na latest Contig Major Full 2011-02-17 ASM18989v2 Washington University in St.Louis GCA_000189895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/895/GCF_000189895.1_ASM18989v2/ na na na haploid archaea 1713264 1713264 31.000000 0 33 33 NCBI RefSeq GCF_000189895.1-RS_2025_12_16 2025-12-16 1687 1556 39 21317366 GCF_000189915.1 PRJNA224116 SAMN02436683 AELQ00000000.1 na 911122 2173 Methanobrevibacter smithii TS146E strain=TS146E na latest Contig Major Full 2011-02-17 ASM18991v2 Washington University in St.Louis GCA_000189915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/915/GCF_000189915.1_ASM18991v2/ na na na haploid archaea 1952171 1952171 30.500000 0 64 64 NCBI RefSeq GCF_000189915.1-RS_2025_12_10 2025-12-10 1942 1852 43 21317366 GCF_000189935.1 PRJNA224116 SAMN02436667 AELR00000000.1 na 911123 2173 Methanobrevibacter smithii TS147A strain=TS147A na latest Contig Major Full 2011-02-17 ASM18993v2 Washington University in St.Louis GCA_000189935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/935/GCF_000189935.1_ASM18993v2/ na na na haploid archaea 2008979 2008979 30.500000 0 61 61 NCBI RefSeq GCF_000189935.1-RS_2025_12_10 2025-12-10 2019 1912 42 21317366 GCF_000189955.1 PRJNA224116 SAMN02436668 AELS00000000.1 na 911124 2173 Methanobrevibacter smithii TS147B strain=TS147B na latest Contig Major Full 2011-02-17 ASM18995v2 Washington University in St.Louis GCA_000189955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/955/GCF_000189955.1_ASM18995v2/ na na na haploid archaea 1965064 1965064 30.500000 0 40 40 NCBI RefSeq GCF_000189955.1-RS_2025_12_08 2025-12-08 1952 1864 42 21317366 GCF_000189995.1 PRJNA224116 SAMN02436680 AELU00000000.1 na 911126 2173 Methanobrevibacter smithii TS94A strain=TS94A na latest Contig Major Full 2011-02-17 ASM18999v2 Washington University in St.Louis GCA_000189995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/189/995/GCF_000189995.1_ASM18999v2/ na na na haploid archaea 1889378 1889378 30.500000 0 47 47 NCBI RefSeq GCF_000189995.1-RS_2025_12_14 2025-12-14 1844 1739 42 21317366 GCF_000190015.1 PRJNA224116 SAMN02436674 AELV00000000.1 na 911127 2173 Methanobrevibacter smithii TS94B strain=TS94B na latest Contig Major Full 2011-02-17 ASM19001v2 Washington University in St.Louis GCA_000190015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/015/GCF_000190015.1_ASM19001v2/ na na na haploid archaea 1886020 1886020 30.500000 0 58 58 NCBI RefSeq GCF_000190015.1-RS_2024_10_21 2024-10-21 1859 1712 42 21317366 GCF_000190035.1 PRJNA224116 SAMN02436675 AELW00000000.1 na 911128 2173 Methanobrevibacter smithii TS94C strain=TS94C na latest Contig Major Full 2011-02-17 ASM19003v2 Washington University in St.Louis GCA_000190035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/035/GCF_000190035.1_ASM19003v2/ na na na haploid archaea 1910054 1910054 30.500000 0 50 50 NCBI RefSeq GCF_000190035.1-RS_2025_12_08 2025-12-08 1870 1771 42 21317366 GCF_000190075.1 PRJNA224116 SAMN02436677 AELY00000000.1 na 911130 2173 Methanobrevibacter smithii TS95B strain=TS95B na latest Contig Major Full 2011-02-17 ASM19007v2 Washington University in St.Louis GCA_000190075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/075/GCF_000190075.1_ASM19007v2/ na na na haploid archaea 1972498 1972498 30.500000 0 44 44 NCBI RefSeq GCF_000190075.1-RS_2026_02_19 2026-02-19 1887 1738 38 21317366 GCF_000190095.1 PRJNA224116 SAMN02436669 AELZ00000000.1 na 911131 2173 Methanobrevibacter smithii TS95C strain=TS95C na latest Contig Major Full 2011-02-17 ASM19009v2 Washington University in St.Louis GCA_000190095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/095/GCF_000190095.1_ASM19009v2/ na na na haploid archaea 1978848 1978848 30.000000 0 37 37 NCBI RefSeq GCF_000190095.1-RS_2026_02_19 2026-02-19 1896 1782 41 21317366 GCF_000190115.1 PRJNA224116 SAMN02436670 AEMA00000000.1 na 911132 2173 Methanobrevibacter smithii TS95D strain=TS95D na latest Contig Major Full 2011-02-17 ASM19011v2 Washington University in St.Louis GCA_000190115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/115/GCF_000190115.1_ASM19011v2/ na na na haploid archaea 2011683 2011683 30.500000 0 58 58 NCBI RefSeq GCF_000190115.1-RS_2026_02_18 2026-02-18 1919 1829 43 21317366 GCF_000190135.1 PRJNA224116 SAMN02436671 AEMB00000000.1 na 911133 2173 Methanobrevibacter smithii TS96A strain=TS96A na latest Contig Major Full 2011-02-17 ASM19013v2 Washington University in St.Louis GCA_000190135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/135/GCF_000190135.1_ASM19013v2/ na na na haploid archaea 1975004 1975004 30.500000 0 47 47 NCBI RefSeq GCF_000190135.1-RS_2026_02_18 2026-02-18 1899 1820 42 21317366 GCF_000190155.1 PRJNA224116 SAMN02436681 AEMC00000000.1 na 911134 2173 Methanobrevibacter smithii TS96B strain=TS96B na latest Contig Major Full 2011-02-17 ASM19015v2 Washington University in St.Louis GCA_000190155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/155/GCF_000190155.1_ASM19015v2/ na na na haploid archaea 1869210 1869210 30.500000 0 45 45 NCBI RefSeq GCF_000190155.1-RS_2026_02_18 2026-02-18 1800 1734 38 21317366 GCF_000190175.1 PRJNA224116 SAMN02436672 AEMD00000000.1 na 911135 2173 Methanobrevibacter smithii TS96C strain=TS96C na latest Contig Major Full 2011-02-17 ASM19017v2 Washington University in St.Louis GCA_000190175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/175/GCF_000190175.1_ASM19017v2/ na na na haploid archaea 1818239 1818239 31.000000 0 108 108 NCBI RefSeq GCF_000190175.1-RS_2025_12_08 2025-12-08 1825 1706 42 21317366 GCF_000190315.1 PRJNA224116 SAMN02603092 na reference genome 985053 985052 Vulcanisaeta moutnovskia 768-28 strain=768-28 na latest Complete Genome Major Full 2011-02-22 ASM19031v1 Centre Bioengineering RAS GCA_000190315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/315/GCF_000190315.1_ASM19031v1/ na assembly from type material na haploid archaea 2298983 2298983 42.500000 1 1 1 NCBI RefSeq GCF_000190315.1-RS_2025_09_05 2025-09-05 2531 2467 49 21398550 GCF_000190335.1 PRJNA224116 SAMN02596696 AELF00000000.1 na 911237 1773 Mycobacterium tuberculosis CDC1551A strain=CDC1551A na latest Scaffold Major Full 2011-02-23 MT_CDC1551A_V1 Broad Institute GCA_000190335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/335/GCF_000190335.1_MT_CDC1551A_V1/ na na na haploid bacteria 4380214 4340388 65.500000 0 53 163 NCBI RefSeq GCF_000190335.1-RS_2025_06_29 2025-06-29 4291 3952 51 na GCF_000190355.1 PRJNA224116 SAMN02463701 ADBG00000000.1 na 556261 556261 Clostridium sp. D5 strain=D5 na latest Scaffold Major Full 2011-02-24 ASM19035v1 Broad Institute GCA_000190355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/355/GCF_000190355.1_ASM19035v1/ na na na haploid bacteria 5427315 5374525 45.500000 0 47 171 NCBI RefSeq GCF_000190355.1-RS_2024_05_28 2024-05-28 4652 4534 66 na GCF_000190375.1 PRJNA224116 SAMN02471805 AEWG00000000.1 na 987059 316997 Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 strain=JA2 na latest Contig Major Full 2011-02-23 ASM19037v1 Department of Plant Sciences, School of Life Sciences, Central University P.O., University of Hyderabad, Hyderabad 500046, India GCA_000190375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/375/GCF_000190375.1_ASM19037v1/ na assembly from type material na haploid bacteria 4129939 4129939 71.500000 0 164 164 NCBI RefSeq GCF_000190375.1-RS_2025_09_19 2025-09-19 3947 3821 52 21478355 GCF_000190415.1 PRJNA224116 SAMN02471331 AEWF00000000.1 reference genome 985867 84647 Candidatus Odyssella thessalonicensis L13 strain=L13 na latest Contig Major Full 2011-02-24 ASM19041v1 Unité de Recherche en Maladies Infectieuses tropicales emergentes, Faculte de Medecine, Universite de Méditerannée, Marseilles, France GCA_000190415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/415/GCF_000190415.1_ASM19041v1/ na na na haploid bacteria 2847648 2847648 42.000000 0 20 20 NCBI RefSeq GCF_000190415.1-RS_2026_05_01 2026-05-01 2514 2423 47 na GCF_000190435.1 PRJNA224116 SAMN00713587 na reference genome 158189 1131703 Sphaerochaeta globosa str. Buddy strain=Buddy na latest Complete Genome Major Full 2011-02-24 ASM19043v1 US DOE Joint Genome Institute GCA_000190435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/435/GCF_000190435.1_ASM19043v1/ na assembly from type material na haploid bacteria 3316466 3316466 49.000000 1 1 1 NCBI RefSeq GCF_000190435.1-RS_2026_05_01 2026-05-01 3114 3043 65 na GCF_000190455.2 PRJNA224116 SAMN02470059 AEWE00000000.2 na 985010 985010 Pseudomonas sp. TJI-51 strain=TJI-51 na latest Scaffold Major Full 2015-05-29 ASM19045v3 ICCBS GCA_000190455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/455/GCF_000190455.2_ASM19045v3/ na na na haploid bacteria 5805096 5788105 62.000000 0 208 402 NCBI RefSeq GCF_000190455.2-RS_2024_08_22 2024-08-22 5617 5288 76 na GCF_000190475.1 PRJNA224116 SAMN02470211 AEWH00000000.1 reference genome 981383 1147159 Ornithinibacillus scapharcae TW25 strain=TW25 na latest Contig Major Full 2011-02-25 ASM19047v1 Kyung Hee University, Republic of Korea GCA_000190475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/475/GCF_000190475.1_ASM19047v1/ na assembly from type material na haploid bacteria 3843870 3843870 36.500000 0 75 75 NCBI RefSeq GCF_000190475.1-RS_2026_03_20 2026-03-20 3971 3777 63 21460087 GCF_000190495.1 PRJNA224116 SAMN02596695 AEIA00000000.1 na 550694 564 Escherichia fergusonii B253 strain=B253 na latest Scaffold Major Full 2011-03-03 ASM19049v1 Broad Institute GCA_000190495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/495/GCF_000190495.1_ASM19049v1/ na na na haploid bacteria 4775957 4768896 50.000000 0 20 41 NCBI RefSeq GCF_000190495.1-RS_2025_12_04 2025-12-04 4690 4464 117 na GCF_000190535.1 PRJNA224116 SAMN00713588 na na 709991 28118 Odoribacter splanchnicus DSM 20712 strain=DSM 220712 na latest Complete Genome Major Full 2011-02-28 ASM19053v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000190535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/535/GCF_000190535.1_ASM19053v1/ na assembly from type material na haploid bacteria 4392288 4392288 43.500000 1 1 1 NCBI RefSeq GCF_000190535.1-RS_2025_12_23 2025-12-23 3713 3533 77 21677857 GCF_000190555.1 PRJNA224116 SAMN00016729 na reference genome 693977 55148 Deinococcus proteolyticus MRP strain=MRP na latest Complete Genome Major Full 2011-02-28 ASM19055v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000190555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/555/GCF_000190555.1_ASM19055v1/ na assembly from type material na haploid bacteria 2886836 2886836 65.500000 5 5 5 NCBI RefSeq GCF_000190555.1-RS_2026_05_01 2026-05-01 2799 2707 58 22768367 GCF_000190575.1 PRJNA224116 SAMN00713589 na reference genome 667015 376805 Phocaeicola salanitronis DSM 18170 strain=DSM 18170 na latest Complete Genome Major Full 2011-02-28 ASM19057v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000190575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/575/GCF_000190575.1_ASM19057v1/ na assembly from type material na haploid bacteria 4308663 4308663 46.500000 4 4 4 NCBI RefSeq GCF_000190575.1-RS_2025_12_02 2025-12-02 3770 3591 102 21677856 GCF_000190595.1 PRJNA224116 SAMN00713590 na reference genome 867900 979 Cellulophaga lytica DSM 7489 strain=DSM 7489 na latest Complete Genome Major Full 2011-02-28 ASM19059v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000190595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/595/GCF_000190595.1_ASM19059v1/ na assembly from type material na haploid bacteria 3765936 3765936 32.000000 1 1 1 NCBI RefSeq GCF_000190595.1-RS_2026_04_26 2026-04-26 3344 3276 56 21677859 GCF_000190635.1 PRJNA224116 SAMN00216969 na reference genome 645991 51197 Syntrophobotulus glycolicus DSM 8271 strain=DSM 8271 na latest Complete Genome Major Full 2011-03-01 ASM19063v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000190635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/635/GCF_000190635.1_ASM19063v1/ na assembly from type material na haploid bacteria 3406739 3406739 46.500000 1 1 1 NCBI RefSeq GCF_000190635.1-RS_2026_05_13 2026-05-13 3394 3285 71 21886864 GCF_000190695.1 PRJNA224116 SAMN00253309 AEWV00000000.1 na 888741 502 Kingella denitrificans ATCC 33394 strain=ATCC 33394 na latest Scaffold Major Full 2011-03-04 ASM19069v1 Baylor College of Medicine GCA_000190695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/695/GCF_000190695.1_ASM19069v1/ na assembly from type material na haploid bacteria 2220455 2186337 54.000000 0 12 56 NCBI RefSeq GCF_000190695.1-RS_2025_08_21 2025-08-21 2271 2182 57 na GCF_000190735.1 PRJNA224116 SAMN00103626 na reference genome 762903 151895 Pseudopedobacter saltans DSM 12145 strain=DSM 12145 na latest Complete Genome Major Full 2011-03-01 ASM19073v2 US DOE Joint Genome Institute (JGI-PGF) GCA_000190735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/735/GCF_000190735.1_ASM19073v2/ na assembly from type material na haploid bacteria 4635236 4635236 36.500000 1 1 1 NCBI RefSeq GCF_000190735.1-RS_2025_12_09 2025-12-09 3868 3783 67 22180808 GCF_000190755.2 PRJNA224116 SAMN00102804 AEGW00000000.2 reference genome 697282 173365 Methylobacter tundripaludum SV96 strain=SV96 na latest Scaffold Major Full 2011-08-25 ASM19075v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000190755.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/755/GCF_000190755.2_ASM19075v3/ na assembly from type material na haploid bacteria 4848329 4846919 49.500000 0 3 18 NCBI RefSeq GCF_000190755.2-RS_2025_07_20 2025-07-20 4377 4277 57 na GCF_000190795.1 PRJNA224116 SAMN02595400 AEHS00000000.1 na 656372 562 Escherichia coli E1167 strain=E1167 na latest Scaffold Major Full 2011-03-03 ASM19079v1 Broad Institute GCA_000190795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/795/GCF_000190795.1_ASM19079v1/ na na na haploid bacteria 4942767 4918295 50.500000 0 32 87 NCBI RefSeq GCF_000190795.1-RS_2025_06_13 2025-06-13 4897 4599 104 na GCF_000190815.1 PRJNA224116 SAMN02595401 AEHT00000000.1 na 656374 562 Escherichia coli E1520 strain=E1520 na latest Scaffold Major Full 2011-03-03 ASM19081v1 Broad Institute GCA_000190815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/815/GCF_000190815.1_ASM19081v1/ na na na haploid bacteria 4932139 4896881 50.500000 0 35 127 NCBI RefSeq GCF_000190815.1-RS_2025_06_13 2025-06-13 4913 4428 112 na GCF_000190835.1 PRJNA224116 SAMN02595402 AEHU00000000.1 na 550687 562 Escherichia coli E482 strain=E482 na latest Scaffold Major Full 2011-03-03 ASM19083v1 Broad Institute GCA_000190835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/835/GCF_000190835.1_ASM19083v1/ na na na haploid bacteria 4857516 4833169 50.500000 0 34 94 NCBI RefSeq GCF_000190835.1-RS_2025_06_13 2025-06-13 4792 4343 104 na GCF_000190895.1 PRJNA224116 SAMN02595398 AEFI00000000.1 na 656388 562 Escherichia coli H252 strain=H252 na latest Scaffold Major Full 2011-03-03 ASM19089v1 Broad Institute GCA_000190895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/895/GCF_000190895.1_ASM19089v1/ na na na haploid bacteria 5266973 5260709 50.500000 0 85 112 NCBI RefSeq GCF_000190895.1-RS_2025_06_13 2025-06-13 5345 4931 116 na GCF_000190915.1 PRJNA224116 SAMN02595399 AEFJ00000000.1 na 656390 562 Escherichia coli H263 strain=H263 na latest Scaffold Major Full 2011-03-03 ASM19091v1 Broad Institute GCA_000190915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/915/GCF_000190915.1_ASM19091v1/ na na na haploid bacteria 5239070 5192679 50.500000 0 64 165 NCBI RefSeq GCF_000190915.1-RS_2025_06_13 2025-06-13 5207 4762 99 na GCF_000190955.1 PRJNA224116 SAMN02595407 AEHZ00000000.1 na 656420 562 Escherichia coli M863 strain=M863 na latest Scaffold Major Full 2011-03-03 ASM19095v1 Broad Institute GCA_000190955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/955/GCF_000190955.1_ASM19095v1/ na na na haploid bacteria 5287955 5250401 50.000000 0 66 152 NCBI RefSeq GCF_000190955.1-RS_2025_06_13 2025-06-13 5247 4812 112 na GCF_000190995.1 PRJNA224116 SAMN02595404 AEHW00000000.1 na 656449 562 Escherichia coli TW10509 strain=TW10509 na latest Scaffold Major Full 2011-03-03 ASM19099v1 Broad Institute GCA_000190995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/995/GCF_000190995.1_ASM19099v1/ na na na haploid bacteria 5388952 5353500 50.500000 0 45 92 NCBI RefSeq GCF_000190995.1-RS_2025_06_13 2025-06-13 5305 4896 115 na GCF_000191015.1 PRJNA224116 SAMN02595405 AEHX00000000.1 na 656404 562 Escherichia coli H489 strain=H489 na latest Scaffold Major Full 2011-03-03 ASM19101v1 Broad Institute GCA_000191015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/015/GCF_000191015.1_ASM19101v1/ na na na haploid bacteria 4876591 4832506 51.000000 0 33 141 NCBI RefSeq GCF_000191015.1-RS_2025_06_13 2025-06-13 4920 4370 122 na GCF_000191045.1 PRJNA224116 SAMN00713591 na reference genome 868864 64160 Desulfurobacterium thermolithotrophum DSM 11699 strain=DSM 11699 na latest Complete Genome Major Full 2011-03-02 ASM19104v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000191045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/045/GCF_000191045.1_ASM19104v1/ na assembly from type material na haploid bacteria 1541968 1541968 35.000000 1 1 1 NCBI RefSeq GCF_000191045.1-RS_2026_05_05 2026-05-05 1604 1530 52 22675590 GCF_000191065.1 PRJNA224116 SAMN00253307 AEWX00000000.1 na 888743 282402 Prevotella multiformis DSM 16608 strain=DSM 16608 na latest Scaffold Major Full 2011-03-04 ASM19106v1 Baylor College of Medicine GCA_000191065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/065/GCF_000191065.1_ASM19106v1/ na assembly from type material na haploid bacteria 3057407 3034240 51.500000 0 25 70 NCBI RefSeq GCF_000191065.1-RS_2025_08_21 2025-08-21 2453 2337 56 na GCF_000191085.1 PRJNA224116 SAMN00253310 AEWY00000000.1 na 888815 1305 Streptococcus sanguinis SK353 strain=CCUG 59324 na latest Scaffold Major Full 2011-03-04 ASM19108v1 Baylor College of Medicine GCA_000191085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/085/GCF_000191085.1_ASM19108v1/ na na na haploid bacteria 2301077 2292863 43.500000 0 3 15 NCBI RefSeq GCF_000191085.1-RS_2026_01_27 2026-01-27 2266 2176 53 na GCF_000191105.1 PRJNA224116 SAMN00253311 AEWZ00000000.1 na 888817 1305 Streptococcus sanguinis SK405 strain=CCUG 59326 na latest Scaffold Major Full 2011-03-04 ASM19110v1 Baylor College of Medicine GCA_000191105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/105/GCF_000191105.1_ASM19110v1/ na na na haploid bacteria 2298289 2297968 43.500000 0 9 12 NCBI RefSeq GCF_000191105.1-RS_2026_01_02 2026-01-02 2261 2167 53 na GCF_000191125.1 PRJNA224116 SAMN00253312 AEXA00000000.1 na 888819 1305 Streptococcus sanguinis SK678 strain=CCUG 59328 na latest Scaffold Major Full 2011-03-04 ASM19112v1 Baylor College of Medicine GCA_000191125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/125/GCF_000191125.1_ASM19112v1/ na na na haploid bacteria 2298720 2288661 43.500000 0 4 10 NCBI RefSeq GCF_000191125.1-RS_2026_01_27 2026-01-27 2229 2153 41 na GCF_000191145.1 PRJNA83123 SAMN02603040 na reference genome 871585 48296 Acinetobacter pittii PHEA-2 strain=PHEA-2 na latest Complete Genome Major Full 2011-03-03 ASM19114v1 Biotechnology Research Institute, Chinese Academy of Agricultural Sciences GCA_000191145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/145/GCF_000191145.1_ASM19114v1/ na na na haploid bacteria 3862530 3862530 39.000000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2016-08-24 3674 3599 75 21441526 GCF_000191185.1 PRJNA224116 SAMN00000665 AEQD00000000.1 na 562020 487 Neisseria meningitidis N1568 strain=N1568 na latest Contig Major Full 2011-03-03 ASM19118v2 University of Maryland IGS GCA_000191185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/185/GCF_000191185.1_ASM19118v2/ na na na haploid bacteria 2180231 2180231 52.000000 0 112 112 NCBI RefSeq GCF_000191185.1-RS_2025_08_15 2025-08-15 2298 1979 58 21368196 GCF_000191225.1 PRJNA224116 SAMN02470736 AEQF00000000.1 na 935587 487 Neisseria meningitidis M6190 strain=M6190 na latest Contig Major Full 2011-03-03 ASM19122v2 University of Maryland School of Medicine GCA_000191225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/225/GCF_000191225.1_ASM19122v2/ na na na haploid bacteria 2213112 2213112 51.500000 0 46 46 NCBI RefSeq GCF_000191225.1-RS_2025_04_15 2025-04-15 2253 2010 80 21368196 GCF_000191245.1 PRJNA224116 SAMN02470731 AEQG00000000.1 na 935594 487 Neisseria meningitidis M13399 strain=M13399 na latest Contig Major Full 2011-03-03 ASM19124v2 University of Maryland School of Medicine GCA_000191245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/245/GCF_000191245.1_ASM19124v2/ na na na haploid bacteria 2262985 2262985 51.500000 0 44 44 NCBI RefSeq GCF_000191245.1-RS_2025_04_15 2025-04-15 2294 2047 74 21368196 GCF_000191265.1 PRJNA224116 SAMN02470725 AEQH00000000.1 na 935590 487 Neisseria meningitidis M0579 strain=M0579 na latest Contig Major Full 2011-03-03 ASM19126v2 University of Maryland School of Medicine GCA_000191265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/265/GCF_000191265.1_ASM19126v2/ na na na haploid bacteria 2260042 2260042 51.500000 0 30 30 NCBI RefSeq GCF_000191265.1-RS_2025_04_15 2025-04-15 2268 2024 64 21368196 GCF_000191285.1 PRJNA224116 SAMN02470728 AEQI00000000.1 na 935586 487 Neisseria meningitidis ES14902 strain=ES14902 na latest Contig Major Full 2011-03-03 ASM19128v2 University of Maryland School of Medicine GCA_000191285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/285/GCF_000191285.1_ASM19128v2/ na na na haploid bacteria 2190538 2190538 51.500000 0 47 47 NCBI RefSeq GCF_000191285.1-RS_2025_04_15 2025-04-15 2228 1990 75 21368196 GCF_000191305.1 PRJNA224116 SAMN02470729 AEQJ00000000.1 na 935597 487 Neisseria meningitidis CU385 strain=CU385 na latest Contig Major Full 2011-03-03 ASM19130v2 University of Maryland School of Medicine GCA_000191305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/305/GCF_000191305.1_ASM19130v2/ na na na haploid bacteria 2253883 2253883 51.500000 0 47 47 NCBI RefSeq GCF_000191305.1-RS_2025_04_15 2025-04-15 2253 1978 77 21368196 GCF_000191345.1 PRJNA224116 SAMN02470735 AEQL00000000.1 na 935595 487 Neisseria meningitidis M01-240013 strain=M01-240013 na latest Contig Major Full 2011-03-03 ASM19134v2 University of Maryland School of Medicine GCA_000191345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/345/GCF_000191345.1_ASM19134v2/ na na na haploid bacteria 2298393 2298393 51.500000 0 58 58 NCBI RefSeq GCF_000191345.1-RS_2025_04_15 2025-04-15 2330 2054 72 21368196 GCF_000191365.1 PRJNA224116 SAMN00253302 AEWT00000000.1 na 888066 37734 Enterococcus casseliflavus ATCC 12755 strain=ATCC 12755 na latest Scaffold Major Full 2011-03-04 ASM19136v1 Baylor College of Medicine GCA_000191365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/365/GCF_000191365.1_ASM19136v1/ na na na haploid bacteria 3600801 3554837 42.500000 0 16 58 NCBI RefSeq GCF_000191365.1-RS_2025_07_23 2025-07-23 3375 3219 55 na GCF_000191405.1 PRJNA224116 SAMN00253308 AEWU00000000.1 na 888828 729 Haemophilus parainfluenzae ATCC 33392 strain=ATCC 33392 na latest Scaffold Major Full 2011-03-04 ASM19140v1 Baylor College of Medicine GCA_000191405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/405/GCF_000191405.1_ASM19140v1/ na assembly from type material na haploid bacteria 2124757 2110314 39.000000 0 10 30 NCBI RefSeq GCF_000191405.1-RS_2026_04_26 2026-04-26 2026 1943 56 na GCF_000191425.1 PRJNA224116 SAMN02604201 na na 935599 487 Neisseria meningitidis G2136 strain=G2136 na latest Complete Genome Major Full 2011-03-04 ASM19142v1 University of Maryland School of Medicine GCA_000191425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/425/GCF_000191425.1_ASM19142v1/ na na na haploid bacteria 2184862 2184862 51.500000 1 1 1 NCBI RefSeq GCF_000191425.1-RS_2026_03_27 2026-03-27 2195 1951 75 21368196 GCF_000191445.1 PRJNA224116 SAMN02604200 na na 909420 487 Neisseria meningitidis H44/76 strain=H44/76 na latest Complete Genome Major Full 2011-03-04 ASM19144v1 University of Maryland School of Medicine GCA_000191445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/445/GCF_000191445.1_ASM19144v1/ na na na haploid bacteria 2240883 2240883 51.500000 1 1 1 NCBI RefSeq GCF_000191445.1-RS_2025_08_18 2025-08-18 2246 1979 75 21368196 GCF_000191465.1 PRJNA224116 SAMN02604198 na na 935591 487 Neisseria meningitidis M01-240149 strain=M01-240149 na latest Complete Genome Major Full 2011-03-04 ASM19146v1 University of Maryland School of Medicine GCA_000191465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/465/GCF_000191465.1_ASM19146v1/ na na na haploid bacteria 2223518 2223518 51.500000 1 1 1 NCBI RefSeq GCF_000191465.1-RS_2026_03_20 2026-03-20 2236 1992 75 21368196 GCF_000191485.1 PRJNA224116 SAMN02604196 na na 935588 487 Neisseria meningitidis M01-240355 strain=M01-240355 na latest Complete Genome Major Full 2011-03-04 ASM19148v1 University of Maryland School of Medicine GCA_000191485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/485/GCF_000191485.1_ASM19148v1/ na na na haploid bacteria 2287777 2287777 51.500000 1 1 1 NCBI RefSeq GCF_000191485.1-RS_2025_04_15 2025-04-15 2298 2023 74 21368196 GCF_000191505.1 PRJNA224116 SAMN02604199 na na 935593 487 Neisseria meningitidis M04-240196 strain=M04-240196 na latest Complete Genome Major Full 2011-03-04 ASM19150v1 University of Maryland School of Medicine GCA_000191505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/505/GCF_000191505.1_ASM19150v1/ na na na haploid bacteria 2250449 2250449 51.500000 1 1 1 NCBI RefSeq GCF_000191505.1-RS_2025_04_15 2025-04-15 2257 1998 75 21368196 GCF_000191525.1 PRJNA224116 SAMN02604197 na na 935589 487 Neisseria meningitidis NZ-05/33 strain=NZ-05/33 na latest Complete Genome Major Full 2011-03-04 ASM19152v1 University of Maryland School of Medicine GCA_000191525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/525/GCF_000191525.1_ASM19152v1/ na na na haploid bacteria 2248966 2248966 51.500000 1 1 1 NCBI RefSeq GCF_000191525.1-RS_2025_04_15 2025-04-15 2277 2020 75 21368196 GCF_000191565.1 PRJNA224116 SAMN02603017 na na 992406 34085 Riemerella anatipestifer RA-GD strain=RA-GD na latest Complete Genome Major Full 2011-03-07 ASM19156v1 Beijing Institute of Genomics, Chinese Academy of Sciences GCA_000191565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/565/GCF_000191565.1_ASM19156v1/ na na na haploid bacteria 2166384 2166384 35.000000 1 1 1 NCBI RefSeq GCF_000191565.1-RS_2025_12_23 2025-12-23 2088 1955 52 21441509 GCF_000191585.1 PRJNA224116 SAMN02232037 na reference genome 877455 877455 Methanobacterium lacus strain=AL-21 na latest Complete Genome Major Full 2011-03-07 ASM19158v1 US DOE Joint Genome Institute GCA_000191585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/585/GCF_000191585.1_ASM19158v1/ na na na haploid archaea 2583753 2583753 36.000000 1 1 1 NCBI RefSeq GCF_000191585.1-RS_2025_11_21 2025-11-21 2575 2512 51 24449792 GCF_000191665.1 PRJNA224116 SAMN02470542 AEVY00000000.1 na 981367 564 Escherichia fergusonii ECD227 strain=ECD227 na latest Chromosome Major Full 2011-03-07 ecmda7 McGill University, Canada GCA_000191665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/665/GCF_000191665.1_ecmda7/ na na na haploid bacteria 4866106 4857906 50.000000 6 6 83 NCBI RefSeq GCF_000191665.1-RS_2025_12_19 2025-12-19 4788 4564 69 na GCF_000191685.1 PRJNA224116 SAMN00138211 AEXJ00000000.1 na 928327 147802 Lactobacillus iners UPII 143-D strain=UPII 143-D na latest Contig Major Full 2011-03-07 ASM19168v1 J. Craig Venter Institute GCA_000191685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/685/GCF_000191685.1_ASM19168v1/ na na na haploid bacteria 1257583 1257583 32.500000 0 21 21 NCBI RefSeq GCF_000191685.1-RS_2025_07_30 2025-07-30 1248 1156 56 na GCF_000191705.1 PRJNA224116 SAMN00138212 AEXK00000000.1 na 928328 147802 Lactobacillus iners UPII 60-B strain=UPII 60-B na latest Contig Major Full 2011-03-07 ASM19170v1 J. Craig Venter Institute GCA_000191705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/705/GCF_000191705.1_ASM19170v1/ na na na haploid bacteria 1323615 1323615 32.500000 0 31 31 NCBI RefSeq GCF_000191705.1-RS_2025_07_30 2025-07-30 1320 1220 54 na GCF_000191725.1 PRJNA224116 SAMN00138207 AEXM00000000.1 na 879305 33034 Anaerococcus prevotii ACS-065-V-Col13 strain=ACS-065-V-Col13 na latest Contig Major Full 2011-03-07 ASM19172v2 J. Craig Venter Institute GCA_000191725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/725/GCF_000191725.1_ASM19172v2/ na na na haploid bacteria 1697099 1697099 33.000000 0 35 35 NCBI RefSeq GCF_000191725.1-RS_2025_08_16 2025-08-16 1689 1610 55 na GCF_000191745.1 PRJNA224116 SAMN00138209 AEXN00000000.1 na 879306 33029 Anaerococcus hydrogenalis ACS-025-V-Sch4 strain=ACS-025-V-Sch4 na latest Contig Major Full 2011-03-07 ASM19174v1 J. Craig Venter Institute GCA_000191745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/745/GCF_000191745.1_ASM19174v1/ na na na haploid bacteria 1981530 1981530 30.000000 0 53 53 NCBI RefSeq GCF_000191745.1-RS_2025_07_30 2025-07-30 1996 1862 50 na GCF_000191765.1 PRJNA224116 SAMN00195201 AEXO00000000.1 na 944557 28129 Prevotella denticola CRIS 18C-A strain=CRIS 18C-A na latest Contig Major Full 2011-03-07 ASM19176v1 J. Craig Venter Institute GCA_000191765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/765/GCF_000191765.1_ASM19176v1/ na na na haploid bacteria 3177783 3177783 50.000000 0 121 121 NCBI RefSeq GCF_000191765.1-RS_2025_12_05 2025-12-05 2588 2445 61 na GCF_000191785.1 PRJNA224116 SAMN02299441 AEON00000000.1 na 864564 78258 Parascardovia denticolens DSM 10105 = JCM 12538 strain=DSM 10105 na latest Chromosome Major Full 2011-03-08 ASM19178v1 Baylor College of Medicine GCA_000191785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/785/GCF_000191785.1_ASM19178v1/ na assembly from type material na haploid bacteria 1891448 1891248 58.500000 1 1 2 NCBI RefSeq GCF_000191785.1-RS_2025_12_23 2025-12-23 1603 1525 54 na GCF_000191825.1 PRJNA224116 SAMN02463845 ADEC00000000.1 na 699187 158 Treponema denticola F0402 strain=F0402 na latest Scaffold Major Full 2011-03-14 Trep_dent_F0402_V1 Broad Institute GCA_000191825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/825/GCF_000191825.1_Trep_dent_F0402_V1/ na na na haploid bacteria 2742634 2734980 38.000000 0 12 31 NCBI RefSeq GCF_000191825.1-RS_2025_07_06 2025-07-06 2634 2426 53 na GCF_000191845.1 PRJNA224116 SAMN00116781 AEXR00000000.1 na 910311 910311 Eggerthella sp. HGA1 strain=HGA1 na latest Contig Major Full 2011-03-07 ASM19184v1 J. Craig Venter Institute GCA_000191845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/845/GCF_000191845.1_ASM19184v1/ na na na haploid bacteria 3362931 3362931 64.000000 0 42 42 NCBI RefSeq GCF_000191845.1-RS_2024_08_22 2024-08-22 2922 2844 54 na GCF_000191865.1 PRJNA224116 SAMN00116780 AEXQ00000000.1 na 910310 910310 Turicibacter sp. HGF1 strain=HGF1 na latest Contig Major Full 2011-03-07 ASM19186v1 J. Craig Venter Institute GCA_000191865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/865/GCF_000191865.1_ASM19186v1/ na na na haploid bacteria 2947473 2947473 34.000000 0 142 142 NCBI RefSeq GCF_000191865.1-RS_2025_08_27 2025-08-27 2855 2783 52 na GCF_000191885.1 PRJNA224116 SAMN02471583 AEWI00000000.1 reference genome 886379 177400 Anaerophaga thermohalophila DSM 12881 strain=DSM 12881 na latest Contig Major Full 2011-03-08 ASM19188v1 University of Bergen GCA_000191885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/885/GCF_000191885.1_ASM19188v1/ na assembly from type material na haploid bacteria 4324239 4324239 41.500000 0 211 211 NCBI RefSeq GCF_000191885.1-RS_2026_05_01 2026-05-01 3406 3304 57 na GCF_000191905.1 PRJNA224116 SAMN02603410 na na 863638 1488 Clostridium acetobutylicum EA 2018 strain=EA 2018 na latest Complete Genome Major Full 2011-03-08 ASM19190v1 Institute of plant physiology and ecology, Shanghai institutes for biological sciences, Chinese academy of sciences GCA_000191905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/905/GCF_000191905.1_ASM19190v1/ na na na haploid bacteria 4132226 4132226 31.000000 2 2 2 NCBI RefSeq GCF_000191905.1-RS_2026_04_16 2026-04-16 4000 3848 114 21284892 GCF_000191925.1 PRJNA224116 SAMN02603516 na na 331636 83554 Chlamydia psittaci 6BC strain=6BC na latest Complete Genome Major Full 2011-03-08 ASM19192v1 Leibniz Institute for Natural Product Research and Infection Biology GCA_000191925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/191/925/GCF_000191925.1_ASM19192v1/ na assembly from type material na haploid bacteria 1179213 1179213 39.000000 2 2 2 NCBI RefSeq GCF_000191925.1-RS_2026_03_30 2026-03-30 1033 986 44 21441521 GCF_000192025.1 PRJNA224116 SAMN02471773 AEQV00000000.1 na 925775 56460 Xanthomonas vesicatoria ATCC 35937 strain=ATCC 35937 na latest Contig Major Full 2011-03-09 ASM19202v1 University of Florida GCA_000192025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/025/GCF_000192025.1_ASM19202v1/ na assembly from type material na haploid bacteria 5531089 5531089 64.000000 0 296 296 NCBI RefSeq GCF_000192025.1-RS_2026_05_07 2026-05-07 4986 4612 114 21396108 GCF_000192045.2 PRJNA224116 SAMN02471764 na na 925776 442694 Xanthomonas perforans 91-118 strain=91-118 na latest Complete Genome Major Full 2017-02-21 ASM19204v3 University of Florida GCA_000192045.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/045/GCF_000192045.2_ASM19204v3/ na na na haploid bacteria 4898349 4898349 65.000000 1 1 1 NCBI RefSeq GCF_000192045.2-RS_2026_05_17 2026-05-17 4192 4016 94 21396108;26089818 GCF_000192065.1 PRJNA224116 SAMN02471772 AEQX00000000.1 na 925777 56454 Xanthomonas hortorum ATCC 19865 strain=ATCC 19865 na latest Contig Major Full 2011-03-09 ASM19206v1 University of Florida GCA_000192065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/065/GCF_000192065.1_ASM19206v1/ na assembly from heterotypic synonym type material na haploid bacteria 5528124 5528124 63.500000 0 552 552 NCBI RefSeq GCF_000192065.1-RS_2026_05_17 2026-05-17 5119 4543 103 21396108 GCF_000192085.1 PRJNA224116 SAMN02415257 AEUK00000000.1 na 909945 28901 Salmonella enterica subsp. enterica serovar Dublin str. SD3246 strain=SD3246 3246 latest Chromosome Major Full 2011-03-22 ASM19208v1 Ark Genomics GCA_000192085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/085/GCF_000192085.1_ASM19208v1/ na na na haploid bacteria 4917459 4917045 52.000000 2 2 30 NCBI RefSeq GCF_000192085.1-RS_2025_02_24 2025-02-24 4874 4499 118 21478351 GCF_000192105.1 PRJNA224116 SAMN02603637 na na 994476 630 Yersinia enterocolitica subsp. palearctica 105.5R(r) strain=105.5R(r) na latest Complete Genome Major Full 2011-03-10 ASM19210v1 Nankai University GCA_000192105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/105/GCF_000192105.1_ASM19210v1/ na na na haploid bacteria 4621811 4621811 47.000000 2 2 2 NCBI RefSeq GCF_000192105.1-RS_2026_03_27 2026-03-27 4213 3923 103 21325549 GCF_000192125.1 PRJNA224116 SAMN02225854 AEUL00000000.1 na 909947 28901 Salmonella enterica subsp. enterica serovar Gallinarum str. SG9 strain=SG9 9 latest Chromosome Major Full 2011-03-22 ASM19212v1 Ark Genomics GCA_000192125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/125/GCF_000192125.1_ASM19212v1/ na na na haploid bacteria 4746069 4745975 52.000000 2 2 4 NCBI RefSeq GCF_000192125.1-RS_2025_02_24 2025-02-24 4631 4152 109 21478351 GCF_000192165.1 PRJNA224116 SAMN00253996 AEXU00000000.1 na 888027 1584 Lactobacillus delbrueckii subsp. lactis DSM 20072 strain=DSM 20072 na latest Scaffold Major Full 2011-03-16 ASM19216v1 Baylor College of Medicine GCA_000192165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/165/GCF_000192165.1_ASM19216v1/ na assembly from type material na haploid bacteria 2071079 1875738 50.000000 0 26 166 NCBI RefSeq GCF_000192165.1-RS_2026_04_30 2026-04-30 1948 1737 78 na GCF_000192185.1 PRJNA224116 SAMN00253313 AEXV00000000.1 na 888809 1305 Streptococcus sanguinis SK72 strain=CCUG 27744 na latest Scaffold Major Full 2011-03-16 ASM19218v1 Baylor College of Medicine GCA_000192185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/185/GCF_000192185.1_ASM19218v1/ na na na haploid bacteria 2376010 2361913 43.500000 0 6 19 NCBI RefSeq GCF_000192185.1-RS_2026_01_27 2026-01-27 2334 2249 40 na GCF_000192205.1 PRJNA224116 SAMN00253314 AEXW00000000.1 na 888810 1305 Streptococcus sanguinis SK115 strain=CCUG 59320 na latest Scaffold Major Full 2011-03-16 ASM19220v1 Baylor College of Medicine GCA_000192205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/205/GCF_000192205.1_ASM19220v1/ na na na haploid bacteria 2346734 2335382 43.500000 0 5 14 NCBI RefSeq GCF_000192205.1-RS_2026_01_27 2026-01-27 2271 2195 41 na GCF_000192225.1 PRJNA224116 SAMN00253971 AEXX00000000.1 na 888059 710239 Capnocytophaga sp. oral taxon 338 str. F0234 strain=F0234 na latest Scaffold Major Full 2011-03-16 ASM19222v1 Baylor College of Medicine GCA_000192225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/225/GCF_000192225.1_ASM19222v1/ na na na haploid bacteria 2548422 2478610 36.500000 0 29 74 NCBI RefSeq GCF_000192225.1-RS_2024_08_22 2024-08-22 2374 2263 51 na GCF_000192245.1 PRJNA224116 SAMN02415615 AEXY00000000.1 na 888811 1305 Streptococcus sanguinis SK150 strain=SK150 na latest Scaffold Major Full 2011-03-16 ASM19224v1 Baylor College of Medicine GCA_000192245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/245/GCF_000192245.1_ASM19224v1/ na na na haploid bacteria 2324334 2313810 43.000000 0 5 26 NCBI RefSeq GCF_000192245.1-RS_2025_07_15 2025-07-15 2269 2200 40 na GCF_000192275.1 PRJNA224116 SAMN00253316 AEXZ00000000.1 na 888812 1305 Streptococcus sanguinis SK160 strain=CCUG 59321 na latest Scaffold Major Full 2011-03-16 ASM19227v1 Baylor College of Medicine GCA_000192275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/275/GCF_000192275.1_ASM19227v1/ na na na haploid bacteria 2333870 2326340 43.500000 0 5 15 NCBI RefSeq GCF_000192275.1-RS_2026_01_27 2026-01-27 2275 2175 55 na GCF_000192315.1 PRJNA224116 SAMN02603712 na na 985081 210 Helicobacter pylori 2017 strain=2017 na latest Complete Genome Major Full 2011-03-15 ASM19231v1 Pathogen Biology Laboratory, University of Hyderabad GCA_000192315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/315/GCF_000192315.1_ASM19231v1/ na na na haploid bacteria 1548238 1548238 39.500000 1 1 1 NCBI RefSeq GCF_000192315.1-RS_2025_09_04 2025-09-04 1515 1357 42 21515762 GCF_000192335.1 PRJNA224116 SAMN02603713 na na 985080 210 Helicobacter pylori 2018 strain=2018 na latest Complete Genome Major Full 2011-03-15 ASM19233v1 Pathogen Biology Laboratory, University of Hyderabad GCA_000192335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/335/GCF_000192335.1_ASM19233v1/ na na na haploid bacteria 1562832 1562832 39.500000 1 1 1 NCBI RefSeq GCF_000192335.1-RS_2026_02_02 2026-02-02 1520 1361 42 21515762 GCF_000192395.2 PRJNA224116 SAMN02469495 na na 927701 2095 Mycoplasma capricolum subsp. capripneumoniae M1601 strain=M1601 na latest Complete Genome Major Full 2016-09-16 ASM19239v2 Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency GCA_000192395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/395/GCF_000192395.2_ASM19239v2/ na na na haploid bacteria 1016707 1016707 23.500000 1 1 1 NCBI RefSeq GCF_000192395.2-RS_2026_02_26 2026-02-26 966 855 39 21994928 GCF_000192435.1 PRJNA224116 SAMN02470983 AEUD00000000.1 reference genome 644548 945692 Gordonia neofelifaecis NRRL B-59395 strain=NRRL B-59395 na latest Contig Major Full 2011-03-15 ASM19243v1 College of life Sciences, Sichuan Normal University, GCA_000192435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/435/GCF_000192435.1_ASM19243v1/ na assembly from type material na haploid bacteria 4257286 4257286 68.000000 0 47 47 NCBI RefSeq GCF_000192435.1-RS_2026_03_27 2026-03-27 4036 3914 53 21742880 GCF_000192475.1 PRJNA224116 SAMN02470214 AEYW00000000.1 reference genome 981384 981384 Ruegeria conchae strain=TW15 na latest Contig Major Full 2011-03-15 ASM19247v1 Kyung Hee University GCA_000192475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/475/GCF_000192475.1_ASM19247v1/ na assembly from type material na haploid bacteria 4490413 4490413 55.500000 0 28 28 NCBI RefSeq GCF_000192475.1-RS_2026_03_27 2026-03-27 4430 4323 51 21551304 GCF_000192575.1 PRJNA224116 SAMN02470891 AEWJ00000000.1 reference genome 983920 378548 Novosphingobium nitrogenifigens DSM 19370 strain=DSM 19370 na latest Scaffold Major Full 2011-03-18 NovNit_2.0 Scion GCA_000192575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/575/GCF_000192575.1_NovNit_2.0/ na assembly from type material na haploid bacteria 4182647 4148048 64.000000 0 32 77 NCBI RefSeq GCF_000192575.1-RS_2025_12_13 2025-12-13 3803 3705 56 22156397 GCF_000192665.1 PRJNA224116 SAMN02472077 AERP00000000.1 na 997824 562 Escherichia coli O157:H7 str. 1044 strain=1044 A latest Contig Major Full 2011-03-16 ASM19266v2 Virginia Bioinformatics Institute GCA_000192665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/665/GCF_000192665.1_ASM19266v2/ na na na haploid bacteria 5487708 5487708 50.500000 0 70 70 NCBI RefSeq GCF_000192665.1-RS_2025_07_12 2025-07-12 5552 5109 116 na GCF_000192685.1 PRJNA224116 SAMN02472080 AERR00000000.1 na 997825 562 Escherichia coli O157:H7 str. 1125 strain=1125 A latest Contig Major Full 2011-03-16 ASM19268v2 Virginia Bioinformatics Institute GCA_000192685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/685/GCF_000192685.1_ASM19268v2/ na na na haploid bacteria 5569621 5569621 50.500000 0 57 57 NCBI RefSeq GCF_000192685.1-RS_2025_06_14 2025-06-14 5620 5143 130 na GCF_000192705.1 PRJNA224116 SAMN02603398 na na 929102 1358 Lactococcus lactis subsp. lactis CV56 strain=CV56 na latest Complete Genome Major Full 2011-03-18 ASM19270v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000192705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/705/GCF_000192705.1_ASM19270v1/ na na na haploid bacteria 2518737 2518737 35.000000 6 6 6 NCBI RefSeq GCF_000192705.1-RS_2025_08_18 2025-08-18 2546 2392 85 21460077 GCF_000192725.1 PRJNA224116 SAMN02603655 na na 941967 29459 Brucella melitensis M28 strain=M28 na latest Complete Genome Major Full 2011-03-18 ASM19272v1 National Key Laboratory of Veterinary Biotechnology , Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences GCA_000192725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/725/GCF_000192725.1_ASM19272v1/ na na na haploid bacteria 3311748 3311748 57.000000 2 2 2 NCBI RefSeq GCF_000192725.1-RS_2026_04_03 2026-04-03 3243 3004 68 21478357 GCF_000192745.1 PRJNA224116 SAMN02603150 na reference genome 991905 991904 Polymorphum gilvum SL003B-26A1 strain=SL003B-26A1 na latest Complete Genome Major Full 2011-03-18 ASM19274v1 College of Engineering, Peking University GCA_000192745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/745/GCF_000192745.1_ASM19274v1/ na assembly from type material na haploid bacteria 4718963 4718963 67.000000 2 2 2 NCBI RefSeq GCF_000192745.1-RS_2026_04_06 2026-04-06 4507 4404 60 21478361 GCF_000192795.1 PRJNA242548 SAMN02981300 AEUG00000000.1 reference genome 948595 103449 Vavraia culicis subsp. floridensis strain=floridensis na latest Scaffold Major Full 2011-03-22 Vavr_culi_floridensis_V1 Broad Institute GCA_000192795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/795/GCF_000192795.1_Vavr_culi_floridensis_V1/ na na na haploid fungi 6118689 6033837 39.500000 0 379 501 NCBI RefSeq Annotation submitted by NCBI RefSeq 2014-07-23 2825 2773 52 na GCF_000192865.1 PRJNA224116 SAMN00713593 na reference genome 717774 119864 Marinomonas mediterranea MMB-1 strain=MMB-1 na latest Complete Genome Major Full 2011-03-22 ASM19286v1 US DOE Joint Genome Institute GCA_000192865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/865/GCF_000192865.1_ASM19286v1/ na assembly from type material na haploid bacteria 4684316 4684316 44.000000 1 1 1 NCBI RefSeq GCF_000192865.1-RS_2025_11_22 2025-11-22 4304 4147 106 22675599 GCF_000192885.1 PRJNA224116 SAMN02603654 na na 703352 29459 Brucella melitensis M5-90 strain=M5-90 na latest Complete Genome Major Full 2011-03-22 ASM19288v1 National Key Laboratory of Veterinary Biotechnology , Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences GCA_000192885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/885/GCF_000192885.1_ASM19288v1/ na na na haploid bacteria 3312229 3312229 57.000000 2 2 2 NCBI RefSeq GCF_000192885.1-RS_2026_05_29 2026-05-29 3247 2988 68 21478357 GCF_000192905.1 PRJNA224116 SAMN02393785 AERC00000000.1 na 857581 480 Moraxella catarrhalis 7169 strain=7169 na latest Contig Major Full 2011-03-22 ASM19290v2 Center for Genomic Sciences GCA_000192905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/905/GCF_000192905.1_ASM19290v2/ na na na haploid bacteria 1903901 1903901 41.500000 0 35 35 NCBI RefSeq GCF_000192905.1-RS_2026_04_17 2026-04-17 1815 1719 51 21269504 GCF_000192925.1 PRJNA224116 SAMN02393786 AERE00000000.1 na 857579 480 Moraxella catarrhalis 103P14B1 strain=103P14B1 na latest Contig Major Full 2011-03-22 ASM19292v2 Center for Genomic Sciences GCA_000192925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/925/GCF_000192925.1_ASM19292v2/ na na na haploid bacteria 1961697 1961697 41.500000 0 99 99 NCBI RefSeq GCF_000192925.1-RS_2026_04_20 2026-04-20 1893 1772 44 21269504 GCF_000192945.1 PRJNA224116 SAMN02393787 AERF00000000.1 na 857578 480 Moraxella catarrhalis 46P47B1 strain=46P47B1 na latest Contig Major Full 2011-03-22 ASM19294v2 Center for Genomic Sciences GCA_000192945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/945/GCF_000192945.1_ASM19294v2/ na na na haploid bacteria 1856042 1856042 41.500000 0 69 69 NCBI RefSeq GCF_000192945.1-RS_2026_04_18 2026-04-18 1766 1675 42 21269504 GCF_000192985.1 PRJNA224116 SAMN02393789 AERH00000000.1 na 857576 480 Moraxella catarrhalis BC1 strain=BC1 na latest Contig Major Full 2011-03-22 ASM19298v2 Center for Genomic Sciences GCA_000192985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/192/985/GCF_000192985.1_ASM19298v2/ na na na haploid bacteria 1954090 1954090 41.500000 0 43 43 NCBI RefSeq GCF_000192985.1-RS_2026_04_19 2026-04-19 1870 1737 51 21269504 GCF_000193005.1 PRJNA224116 SAMN02393790 AERI00000000.1 na 857575 480 Moraxella catarrhalis BC7 strain=BC7 na latest Contig Major Full 2011-03-22 ASM19300v2 Center for Genomic Sciences GCA_000193005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/005/GCF_000193005.1_ASM19300v2/ na na na haploid bacteria 1904293 1904293 41.500000 0 37 37 NCBI RefSeq GCF_000193005.1-RS_2026_04_18 2026-04-18 1804 1688 51 21269504 GCF_000193025.1 PRJNA224116 SAMN02393791 AERJ00000000.1 na 857574 480 Moraxella catarrhalis BC8 strain=BC8 na latest Contig Major Full 2011-03-22 ASM19302v2 Center for Genomic Sciences GCA_000193025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/025/GCF_000193025.1_ASM19302v2/ na na na haploid bacteria 1912542 1912542 41.500000 0 32 32 NCBI RefSeq GCF_000193025.1-RS_2026_04_20 2026-04-20 1812 1709 51 21269504 GCF_000193045.1 PRJNA224116 SAMN02393792 AERK00000000.1 na 857573 480 Moraxella catarrhalis CO72 strain=CO72 na latest Contig Major Full 2011-03-22 ASM19304v2 Center for Genomic Sciences GCA_000193045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/045/GCF_000193045.1_ASM19304v2/ na na na haploid bacteria 1947635 1947635 41.500000 0 25 25 NCBI RefSeq GCF_000193045.1-RS_2026_04_05 2026-04-05 1847 1747 51 21269504 GCF_000193065.1 PRJNA224116 SAMN02393793 AEPC00000000.1 na 857572 480 Moraxella catarrhalis 101P30B1 strain=101P30B1 na latest Contig Major Full 2011-03-22 ASM19306v2 Center for Genomic Sciences GCA_000193065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/065/GCF_000193065.1_ASM19306v2/ na na na haploid bacteria 1866092 1866092 41.500000 0 26 26 NCBI RefSeq GCF_000193065.1-RS_2026_04_20 2026-04-20 1769 1654 49 21269504 GCF_000193085.1 PRJNA224116 SAMN02393794 AERL00000000.1 na 857571 480 Moraxella catarrhalis O35E strain=O35E na latest Contig Major Full 2011-03-22 ASM19308v2 Center for Genomic Sciences GCA_000193085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/085/GCF_000193085.1_ASM19308v2/ na na na haploid bacteria 1776416 1776416 41.500000 0 42 42 NCBI RefSeq GCF_000193085.1-RS_2026_04_20 2026-04-20 1675 1583 56 21269504 GCF_000193185.2 PRJNA224116 SAMN02595346 na na 659019 1773 Mycobacterium tuberculosis W-148 strain=W-148 na latest Complete Genome Major Full 2015-08-19 ASM19318v2 Broad Institute GCA_000193185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/185/GCF_000193185.2_ASM19318v2/ na na na haploid bacteria 4418548 4418548 65.500000 1 1 1 NCBI RefSeq GCF_000193185.2-RS_2025_07_09 2025-07-09 4166 3896 51 na GCF_000193205.1 PRJNA224116 SAMN00100756 na na 2976812 2976812 Aerococcus sp. Group 1 strain=ACS-120-V-Col10a na latest Complete Genome Major Full 2011-03-23 ASM19320v1 J. Craig Venter Institute GCA_000193205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/205/GCF_000193205.1_ASM19320v1/ na na na haploid bacteria 2080974 2080974 42.000000 1 1 1 NCBI RefSeq GCF_000193205.1-RS_2024_11_05 2024-11-05 1952 1803 76 na GCF_000193225.1 PRJNA224116 SAMN02393706 AFAL00000000.1 na 565443 1110389 Verminephrobacter aporrectodeae subsp. tuberculatae At4 strain=At4 na latest Contig Major Full 2011-03-23 ASM19322v1 Aarhus University, Denmark GCA_000193225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/225/GCF_000193225.1_ASM19322v1/ na assembly from type material na haploid bacteria 4681801 4681801 65.500000 0 1082 1082 NCBI RefSeq GCF_000193225.1-RS_2025_08_04 2025-08-04 4976 4446 48 22333491 GCF_000193245.1 PRJNA224116 SAMN02469765 AEUP00000000.1 na 945681 65959 Acetobacter pomorum DM001 strain=DM001 na latest Contig Major Full 2011-03-24 ASM19324v1 Division of molecular life science, Ewha Woman's University and National Creative Research Initiative Center for Symbiosystem GCA_000193245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/245/GCF_000193245.1_ASM19324v1/ na na na haploid bacteria 2883421 2883421 52.500000 0 66 66 NCBI RefSeq GCF_000193245.1-RS_2026_03_23 2026-03-23 2746 2641 50 22053049 GCF_000193355.1 PRJNA224116 SAMN02603315 na na 541229 1428 Bacillus thuringiensis serovar chinensis CT-43 strain=CT-43 na latest Complete Genome Major Full 2011-03-28 ASM19335v1 Huazhong Agricultural University GCA_000193355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/355/GCF_000193355.1_ASM19335v1/ na na na haploid bacteria 6151150 6151150 35.000000 11 11 11 NCBI RefSeq GCF_000193355.1-RS_2025_08_18 2025-08-18 6416 5985 130 21551307 GCF_000193375.1 PRJNA224116 SAMN02603093 na reference genome 999630 184117 Thermoproteus uzoniensis 768-20 strain=768-20 na latest Complete Genome Major Full 2011-03-28 ASM19337v1 Centre Bioengineering RAS GCA_000193375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/375/GCF_000193375.1_ASM19337v1/ na na na haploid archaea 1936063 1936063 59.500000 1 1 1 NCBI RefSeq GCF_000193375.1-RS_2026_03_30 2026-03-30 2250 2185 49 21478349 GCF_000193395.1 PRJNA224116 SAMN00031760 na na 767031 28129 Prevotella denticola F0289 strain=F0289 na latest Complete Genome Major Full 2011-03-28 ASM19339v1 J. Craig Venter Institute GCA_000193395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/395/GCF_000193395.1_ASM19339v1/ na na na haploid bacteria 2937589 2937589 50.500000 1 1 1 NCBI RefSeq GCF_000193395.1-RS_2025_12_03 2025-12-03 2312 2199 66 na GCF_000193415.1 PRJNA224116 SAMN02471038 ADHJ00000000.1 na 715225 71995 Paenibacillus vortex V453 strain=V453 na latest Contig Major Full 2010-12-21 ASM19341v1 Tauber Initiative GCA_000193415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/415/GCF_000193415.1_ASM19341v1/ na na na haploid bacteria 6385945 6385945 49.000000 0 56 56 NCBI RefSeq GCF_000193415.1-RS_2025_08_25 2025-08-25 6101 5630 67 21167037 GCF_000193435.2 PRJNA224116 SAMN00713563 na na 632516 301953 Caldicellulosiruptor acetigenus 6A strain=6A na latest Complete Genome Major Full 2011-08-22 ASM19343v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000193435.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/435/GCF_000193435.2_ASM19343v3/ na assembly from heterotypic synonym type material na haploid bacteria 2674809 2674809 36.000000 1 1 1 NCBI RefSeq GCF_000193435.2-RS_2026_02_24 2026-02-24 2594 2356 57 na GCF_000193455.1 PRJNA224116 SAMN02435894 AAHS00000000.3 na 320371 28450 Burkholderia pseudomallei 1710a strain=1710a na latest Chromosome Major Full 2009-12-09 ASM19345v1 TIGR GCA_000193455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/455/GCF_000193455.1_ASM19345v1/ na na na haploid bacteria 7336077 7329077 68.000000 2 40 108 NCBI RefSeq GCF_000193455.1-RS_2025_08_05 2025-08-05 6576 6318 65 na GCF_000193475.1 PRJNA224116 SAMN02435836 AAMB00000000.2 na 357347 28450 Burkholderia pseudomallei 1106b strain=1106b na latest Chromosome Major Full 2009-06-26 ASM19347v1 TIGR GCA_000193475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/475/GCF_000193475.1_ASM19347v1/ na na na haploid bacteria 7216534 7213434 68.000000 2 84 113 NCBI RefSeq GCF_000193475.1-RS_2026_02_15 2026-02-15 6464 6213 71 na GCF_000193495.2 PRJNA224116 SAMD00036545 na na 887700 435 Acetobacter aceti NBRC 14818 strain=NBRC 14818 na latest Complete Genome Major Full 2020-09-02 ASM19349v2 The University of Tokyo GCA_000193495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/495/GCF_000193495.2_ASM19349v2/ na assembly from type material na haploid bacteria 3693126 3693126 57.000000 5 5 5 NCBI RefSeq GCF_000193495.2-RS_2025_12_15 2025-12-15 3426 3273 63 21081762 GCF_000193515.1 PRJNA224116 SAMN02470861 ADKR00000000.1 na 743273 520 Bordetella pertussis B0558 strain=B0558 na latest Contig Major Full 2010-11-09 ASM19351v2 RIVM GCA_000193515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/515/GCF_000193515.1_ASM19351v2/ na na na haploid bacteria 3812121 3812121 68.000000 0 448 448 NCBI RefSeq GCF_000193515.1-RS_2026_05_01 2026-05-01 3787 3412 54 21070624 GCF_000193535.1 PRJNA224116 SAMN02470862 ADKS00000000.1 na 743274 520 Bordetella pertussis B1193 strain=B1193 na latest Contig Major Full 2010-11-09 ASM19353v2 RIVM GCA_000193535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/535/GCF_000193535.1_ASM19353v2/ na na na haploid bacteria 3813940 3813940 68.000000 0 404 404 NCBI RefSeq GCF_000193535.1-RS_2026_05_01 2026-05-01 3770 3414 54 21070624 GCF_000193555.1 PRJNA224116 SAMN02470859 ADKT00000000.1 na 743275 520 Bordetella pertussis B1831 strain=B1831 na latest Contig Major Full 2010-11-09 ASM19355v2 RIVM GCA_000193555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/555/GCF_000193555.1_ASM19355v2/ na na na haploid bacteria 3819741 3819741 68.000000 0 627 627 NCBI RefSeq GCF_000193555.1-RS_2026_05_01 2026-05-01 3687 3350 55 21070624 GCF_000193575.1 PRJNA224116 SAMN02470860 ADKU00000000.1 na 743276 520 Bordetella pertussis B1834 strain=B1834 na latest Contig Major Full 2010-11-09 ASM19357v2 RIVM GCA_000193575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/575/GCF_000193575.1_ASM19357v2/ na na na haploid bacteria 3792615 3792615 68.000000 0 371 371 NCBI RefSeq GCF_000193575.1-RS_2026_05_01 2026-05-01 3706 3384 54 21070624 GCF_000193595.2 PRJNA224116 SAMN02470863 na na 743277 520 Bordetella pertussis B1917 strain=B1917 na latest Complete Genome Major Full 2014-11-13 ASM19359v3 RIVM GCA_000193595.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/595/GCF_000193595.2_ASM19359v3/ na na na haploid bacteria 4102186 4102186 67.500000 1 1 1 NCBI RefSeq GCF_000193595.2-RS_2026_01_24 2026-01-24 3943 3601 64 21070624;25540342 GCF_000193615.2 PRJNA224116 SAMN02470864 na na 743278 520 Bordetella pertussis B1920 strain=B1920 na latest Complete Genome Major Full 2014-11-13 ASM19361v3 RIVM GCA_000193615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/615/GCF_000193615.2_ASM19361v3/ na na na haploid bacteria 4114630 4114630 67.500000 1 1 1 NCBI RefSeq GCF_000193615.2-RS_2025_12_28 2025-12-28 3979 3627 64 21070624;25540342 GCF_000193635.1 PRJNA224116 SAMN02470197 AEKT00000000.1 na 911104 137591 Weissella cibaria KACC 11862 strain=KACC 11862 na latest Contig Major Full 2010-11-05 ASM19363v1 Korea Research Institute of Bioscience and Biotechnology GCA_000193635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/635/GCF_000193635.1_ASM19363v1/ na assembly from type material na haploid bacteria 2317857 2317857 45.000000 0 72 72 NCBI RefSeq GCF_000193635.1-RS_2026_03_20 2026-03-20 2213 2114 84 21097615 GCF_000193735.1 PRJNA224116 SAMN02471879 AEPF00000000.1 na 933266 490 Neisseria sicca 4320 strain=4320 na latest Contig Major Full 2010-12-29 ASM19373v2 University of Maryland, College Park GCA_000193735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/735/GCF_000193735.1_ASM19373v2/ na na na haploid bacteria 2519401 2519401 51.000000 0 169 169 NCBI RefSeq GCF_000193735.1-RS_2025_07_30 2025-07-30 2487 2291 56 na GCF_000193775.1 PRJNA224116 SAMN02471878 AEPH00000000.1 na 933269 489 Neisseria polysaccharea NS342 strain=NS342 na latest Scaffold Major Full 2010-12-29 ASM19377v1 University of Maryland, College Park GCA_000193775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/775/GCF_000193775.1_ASM19377v1/ na na na haploid bacteria 2169528 2169518 51.500000 0 288 289 NCBI RefSeq GCF_000193775.1-RS_2025_03_03 2025-03-03 2142 1917 52 na GCF_000193795.1 PRJNA224116 SAMN02471876 AEPI00000000.1 na 933280 486 Neisseria lactamica NS19 strain=NS19 na latest Contig Major Full 2010-12-29 ASM19379v2 University of Maryland, College Park GCA_000193795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/795/GCF_000193795.1_ASM19379v2/ na na na haploid bacteria 2138393 2138393 52.500000 0 132 132 NCBI RefSeq GCF_000193795.1-RS_2025_06_15 2025-06-15 2214 2017 51 na GCF_000193835.1 PRJNA224116 SAMN02393771 ABWS00000000.1 na 543538 1280 Staphylococcus aureus subsp. aureus CGS00 strain=CGS00 na latest Contig Major Full 2010-12-17 ASM19383v2 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000193835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/835/GCF_000193835.1_ASM19383v2/ na na na haploid bacteria 2781527 2781527 32.500000 0 18 18 NCBI RefSeq GCF_000193835.1-RS_2025_08_17 2025-08-17 2773 2563 61 na GCF_000193855.1 PRJNA224116 SAMN02393769 ABWT00000000.1 na 543539 1280 Staphylococcus aureus subsp. aureus CGS01 strain=CGS01 na latest Contig Major Full 2010-12-17 ASM19385v2 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000193855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/855/GCF_000193855.1_ASM19385v2/ na na na haploid bacteria 2857982 2857982 32.500000 0 58 58 NCBI RefSeq GCF_000193855.1-RS_2025_08_18 2025-08-18 2899 2750 64 na GCF_000193875.1 PRJNA224116 SAMN02393770 ABWY00000000.1 na 543540 1280 Staphylococcus aureus subsp. aureus CGS03 strain=CGS03 na latest Contig Major Full 2010-12-16 ASM19387v2 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000193875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/875/GCF_000193875.1_ASM19387v2/ na na na haploid bacteria 2830354 2830354 33.000000 0 68 68 NCBI RefSeq GCF_000193875.1-RS_2025_08_18 2025-08-18 2886 2720 64 na GCF_000193895.1 PRJNA224116 SAMN02472086 AERM00000000.1 na 941429 622 Shigella dysenteriae CDC 74-1112 strain=CDC 74-1112 na latest Contig Major Full 2011-01-27 ASM19389v2 Virginia Bioinformatics Institute GCA_000193895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/895/GCF_000193895.1_ASM19389v2/ na na na haploid bacteria 4596141 4596141 51.000000 0 242 242 NCBI RefSeq GCF_000193895.1-RS_2026_06_10 2026-06-10 4919 3888 98 na GCF_000193955.1 PRJNA224116 SAMN02472078 AERQ00000000.1 na 941435 562 Escherichia coli O157:H7 str. EC1212 strain=EC1212 A latest Contig Major Full 2011-01-27 ASM19395v2 Virginia Bioinformatics Institute GCA_000193955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/955/GCF_000193955.1_ASM19395v2/ na na na haploid bacteria 5510053 5510053 50.500000 0 32 32 NCBI RefSeq GCF_000193955.1-RS_2025_06_14 2025-06-14 5544 5073 134 na GCF_000193975.1 PRJNA224116 SAMN02472083 AERT00000000.1 na 945433 562 Escherichia coli WV_060327 strain=WV_060327 na latest Contig Major Full 2011-01-27 ASM19397v2 Virginia Bioinformatics Institute GCA_000193975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/975/GCF_000193975.1_ASM19397v2/ na na na haploid bacteria 4681497 4681497 50.500000 0 28 28 NCBI RefSeq GCF_000193975.1-RS_2025_06_13 2025-06-13 4620 4307 109 na GCF_000193995.1 PRJNA224116 SAMN02472081 AERU00000000.1 na 945434 562 Escherichia coli EC4100B strain=EC4100B na latest Contig Major Full 2011-01-27 ASM19399v2 Virginia Bioinformatics Institute GCA_000193995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/995/GCF_000193995.1_ASM19399v2/ na na na haploid bacteria 5111899 5111899 50.500000 0 42 42 NCBI RefSeq GCF_000193995.1-RS_2025_06_13 2025-06-13 5117 4677 115 na GCF_000194115.1 PRJNA224116 SAMN02603307 na reference genome 695562 1604 Lactobacillus amylovorus GRL1118 strain=GRL1118 na latest Complete Genome Major Full 2011-03-29 ASM19411v1 Helsinki University, Finland GCA_000194115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/115/GCF_000194115.1_ASM19411v1/ na na na haploid bacteria 1977087 1977087 38.000000 3 3 3 NCBI RefSeq GCF_000194115.1-RS_2026_04_14 2026-04-14 2009 1808 77 21478337 GCF_000194135.1 PRJNA224116 SAMN00713597 na reference genome 760142 84405 Hippea maritima DSM 10411 strain=DSM 10411 na latest Complete Genome Major Full 2011-03-29 ASM19413v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000194135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/135/GCF_000194135.1_ASM19413v1/ na assembly from type material na haploid bacteria 1694430 1694430 37.500000 1 1 1 NCBI RefSeq GCF_000194135.1-RS_2026_05_22 2026-05-22 1801 1701 58 21886857 GCF_000194155.1 PRJNA224116 SAMN02470034 AEYC00000000.1 na 994479 60894 Saccharopolyspora spinosa NRRL 18395 strain=NRRL 18395 na latest Scaffold Major Full 2011-03-29 ASM19415v1 Microbial Genome Research Center, CASPMI, IM-CAS GCA_000194155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/155/GCF_000194155.1_ASM19415v1/ na assembly from type material na haploid bacteria 8581920 8527776 68.000000 0 22 118 NCBI RefSeq GCF_000194155.1-RS_2026_03_20 2026-03-20 8246 7745 63 21478350 GCF_000194175.1 PRJNA224116 SAMN02436330 AEZI00000000.2 na 869669 562 Escherichia coli 1.2741 strain=1.2741 na latest Contig Major Full 2012-05-02 ASM19417v2 E. coli Reference Center GCA_000194175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/175/GCF_000194175.1_ASM19417v2/ na na na haploid bacteria 5685669 5685669 50.500000 0 28 28 NCBI RefSeq GCF_000194175.1-RS_2025_06_13 2025-06-13 5665 5225 132 na GCF_000194215.1 PRJNA224116 SAMN02436471 AEZJ00000000.2 na 869670 562 Escherichia coli 97.0246 strain=97.0246 na latest Contig Major Full 2012-05-02 ASM19421v2 E. coli Reference Center GCA_000194215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/215/GCF_000194215.1_ASM19421v2/ na na na haploid bacteria 5497467 5497467 50.500000 0 49 49 NCBI RefSeq GCF_000194215.1-RS_2025_06_13 2025-06-13 5661 5031 150 na GCF_000194235.1 PRJNA224116 SAMN02436638 AEZL00000000.2 na 869672 562 Escherichia coli 97.0259 strain=97.0259 na latest Contig Major Full 2012-05-02 ASM19423v2 E. coli Reference Center GCA_000194235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/235/GCF_000194235.1_ASM19423v2/ na na na haploid bacteria 5212383 5212383 50.500000 0 36 36 NCBI RefSeq GCF_000194235.1-RS_2025_06_14 2025-06-14 5115 4729 119 na GCF_000194255.1 PRJNA224116 SAMN02436472 AEZN00000000.1 na 869674 562 Escherichia coli 95.0941 strain=95.0941 na latest Scaffold Major Full 2011-03-30 ASM19425v1 E. coli Reference Center GCA_000194255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/255/GCF_000194255.1_ASM19425v1/ na na na haploid bacteria 4792723 4786951 51.000000 0 36 47 NCBI RefSeq GCF_000194255.1-RS_2025_06_13 2025-06-13 4636 4245 123 na GCF_000194295.2 PRJNA224116 SAMN02436632 AEZP00000000.2 na 869676 562 Escherichia coli 97.0264 strain=97.0264 na latest Contig Major Full 2015-02-05 ASM19429v2 E. coli Reference Center GCA_000194295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/295/GCF_000194295.2_ASM19429v2/ na na na haploid bacteria 5177620 5177620 50.500000 0 13 13 NCBI RefSeq GCF_000194295.2-RS_2025_06_14 2025-06-14 5064 4709 118 na GCF_000194335.1 PRJNA224116 SAMN02436552 AEZU00000000.2 na 869681 562 Escherichia coli 4.0522 strain=4.0522 na latest Contig Major Full 2012-05-02 ASM19433v2 E. coli Reference Center GCA_000194335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/335/GCF_000194335.1_ASM19433v2/ na na na haploid bacteria 5834353 5834353 50.500000 0 109 109 NCBI RefSeq GCF_000194335.1-RS_2026_06_14 2026-06-14 6101 5476 153 na GCF_000194355.1 PRJNA224116 SAMN02436634 AEZV00000000.2 na 869682 562 Escherichia coli JB1-95 strain=JB1-95 na latest Contig Major Full 2012-05-02 ASM19435v2 E. coli Reference Center GCA_000194355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/355/GCF_000194355.1_ASM19435v2/ na na na haploid bacteria 5409495 5409495 50.500000 0 143 143 NCBI RefSeq GCF_000194355.1-RS_2025_06_14 2025-06-14 5618 5074 131 na GCF_000194395.1 PRJNA224116 SAMN02436635 AEZX00000000.2 na 869684 562 Escherichia coli 5.0959 strain=5.0959 na latest Contig Major Full 2012-05-02 ASM19439v2 E. coli Reference Center GCA_000194395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/395/GCF_000194395.1_ASM19439v2/ na na na haploid bacteria 5416945 5416945 50.500000 0 29 29 NCBI RefSeq GCF_000194395.1-RS_2025_06_14 2025-06-14 5480 4968 130 na GCF_000194415.1 PRJNA224116 SAMN02436331 AEZO00000000.2 na 869675 562 Escherichia coli 1.2264 strain=1.2264 na latest Contig Major Full 2012-05-02 ASM19441v2 E. coli Reference Center GCA_000194415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/415/GCF_000194415.1_ASM19441v2/ na na na haploid bacteria 5504843 5504843 50.500000 0 31 31 NCBI RefSeq GCF_000194415.1-RS_2025_06_13 2025-06-13 5473 5091 120 na GCF_000194435.1 PRJNA224116 SAMN00113720 AEZR00000000.2 na 869678 562 Escherichia coli 99.0741 strain=99.0741 na latest Contig Major Full 2012-05-02 ASM19443v2 E. coli Reference Center GCA_000194435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/435/GCF_000194435.1_ASM19443v2/ na na na haploid bacteria 5451210 5451210 50.500000 0 84 84 NCBI RefSeq GCF_000194435.1-RS_2025_06_14 2025-06-14 5505 5070 117 na GCF_000194475.2 PRJNA224116 SAMN02436636 AEZY00000000.2 na 869685 562 Escherichia coli 9.1649 strain=9.1649 na latest Contig Major Full 2015-04-03 ASM19447v2 E. coli Reference Center GCA_000194475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/475/GCF_000194475.2_ASM19447v2/ na na na haploid bacteria 5108359 5108359 50.500000 0 30 30 NCBI RefSeq GCF_000194475.2-RS_2025_06_14 2025-06-14 4967 4636 118 na GCF_000194495.1 PRJNA224116 SAMN02436474 AFAA00000000.2 na 869687 562 Escherichia coli 4.0967 strain=4.0967 na latest Contig Major Full 2012-05-02 ASM19449v2 E. coli Reference Center GCA_000194495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/495/GCF_000194495.1_ASM19449v2/ na na na haploid bacteria 5870822 5870822 50.500000 0 41 41 NCBI RefSeq GCF_000194495.1-RS_2025_03_11 2025-03-11 6068 5664 123 na GCF_000194535.1 PRJNA224116 SAMN02436637 AFAB00000000.2 na 869688 562 Escherichia coli 2.3916 strain=2.3916 na latest Contig Major Full 2012-05-02 ASM19453v2 E. coli Reference Center GCA_000194535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/535/GCF_000194535.1_ASM19453v2/ na na na haploid bacteria 5639302 5639302 50.500000 0 234 234 NCBI RefSeq GCF_000194535.1-RS_2025_06_13 2025-06-13 5964 5377 140 na GCF_000194555.1 PRJNA224116 SAMN00109820 AFAD00000000.2 na 869690 562 Escherichia coli 2.4168 strain=2.4168 na latest Contig Major Full 2012-05-02 ASM19455v2 E. coli Reference Center GCA_000194555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/555/GCF_000194555.1_ASM19455v2/ na na na haploid bacteria 4744060 4744060 51.000000 0 19 19 NCBI RefSeq GCF_000194555.1-RS_2025_06_14 2025-06-14 4713 4338 124 na GCF_000194575.1 PRJNA224116 SAMN00792436 AEXD00000000.1 na 754082 562 Escherichia coli STEC_7v strain=STEC_7v na latest Contig Major Full 2011-03-30 ASM19457v2 Institute for Genome Sciences GCA_000194575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/575/GCF_000194575.1_ASM19457v2/ na na na haploid bacteria 5195834 5195834 50.500000 0 29 29 NCBI RefSeq GCF_000194575.1-RS_2025_07_10 2025-07-10 5077 4744 145 na GCF_000194605.1 PRJNA224116 SAMN00713599 na reference genome 755732 191579 Fluviicola taffensis DSM 16823 strain=DSM 16823 na latest Complete Genome Major Full 2011-03-31 ASM19460v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000194605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/605/GCF_000194605.1_ASM19460v1/ na assembly from type material na haploid bacteria 4633577 4633577 36.500000 1 1 1 NCBI RefSeq GCF_000194605.1-RS_2026_05_01 2026-05-01 4078 4016 52 22180807 GCF_000194625.1 PRJNA224116 SAMN00713598 na reference genome 693661 58290 Archaeoglobus veneficus SNP6 strain=SNP6 na latest Complete Genome Major Full 2011-03-31 ASM19462v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000194625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/625/GCF_000194625.1_ASM19462v1/ na assembly from type material na haploid archaea 1901943 1901943 47.000000 1 1 1 NCBI RefSeq GCF_000194625.1-RS_2025_11_20 2025-11-20 2197 2130 51 na GCF_000194645.1 PRJNA224116 SAMN00031773 AFAE00000000.2 na 869691 562 Escherichia coli 3.2303 strain=3.2303 na latest Contig Major Full 2012-05-02 ASM19464v2 E. coli Reference Center GCA_000194645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/645/GCF_000194645.1_ASM19464v2/ na na na haploid bacteria 4946233 4946233 50.500000 0 35 35 NCBI RefSeq GCF_000194645.1-RS_2025_06_13 2025-06-13 4987 4469 124 na GCF_000194665.1 PRJNA224116 SAMN00031774 AFAF00000000.2 na 869692 562 Escherichia coli 3003 strain=3003 na latest Contig Major Full 2012-05-02 ASM19466v2 E. coli Reference Center GCA_000194665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/665/GCF_000194665.1_ASM19466v2/ na na na haploid bacteria 4917326 4917326 50.500000 0 8 8 NCBI RefSeq GCF_000194665.1-RS_2025_06_13 2025-06-13 4948 4640 119 na GCF_000194685.1 PRJNA224116 SAMN00116811 AFAG00000000.2 na 869693 562 Escherichia coli TW07793 strain=TW07793 na latest Contig Major Full 2012-05-02 ASM19468v2 E. coli Reference Center GCA_000194685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/685/GCF_000194685.1_ASM19468v2/ na na na haploid bacteria 4643920 4643920 50.500000 0 8 8 NCBI RefSeq GCF_000194685.1-RS_2025_06_13 2025-06-13 4589 4307 113 na GCF_000194705.1 PRJNA224116 SAMN02436334 AFAH00000000.2 na 869694 562 Escherichia coli B41 strain=B41 na latest Contig Major Full 2012-05-02 ASM19470v2 E. coli Reference Center GCA_000194705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/705/GCF_000194705.1_ASM19470v2/ na na na haploid bacteria 5011605 5011605 50.500000 0 5 5 NCBI RefSeq GCF_000194705.1-RS_2025_06_13 2025-06-13 4946 4570 121 na GCF_000194725.1 PRJNA224116 SAMN00116815 AFAI00000000.2 na 869695 562 Escherichia coli 900105 (10e) strain=900105 (10e) na latest Contig Major Full 2012-05-02 ASM19472v2 E. coli Reference Center GCA_000194725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/725/GCF_000194725.1_ASM19472v2/ na na na haploid bacteria 5560162 5560162 50.500000 0 51 51 NCBI RefSeq GCF_000194725.1-RS_2025_06_13 2025-06-13 5713 5099 135 na GCF_000194745.1 PRJNA224116 SAMN02603164 na na 999541 28095 Burkholderia gladioli BSR3 strain=BSR3 na latest Complete Genome Major Full 2011-04-01 ASM19474v1 Creative Research Initiatives for Bacterial Communication, Seoul National University GCA_000194745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/745/GCF_000194745.1_ASM19474v1/ na na na haploid bacteria 9052299 9052299 67.500000 6 6 6 NCBI RefSeq GCF_000194745.1-RS_2026_03_27 2026-03-27 8037 7760 88 21478339 GCF_000194805.1 PRJNA224116 SAMN02603052 na na 994484 930166 Pseudomonas brassicacearum subsp. brassicacearum NFM421 strain=NFM421 na latest Complete Genome Major Full 2011-04-01 ASM19480v1 CEA/DSV/IBeB/SBVME/LEMIRE GCA_000194805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/805/GCF_000194805.1_ASM19480v1/ na na na haploid bacteria 6843248 6843248 61.000000 1 1 1 NCBI RefSeq GCF_000194805.1-RS_2026_03_03 2026-03-03 6163 5984 86 21515771 GCF_000194825.2 PRJNA224116 SAMN02299430 ADWB00000000.1 na 765057 1747 Cutibacterium acnes HL096PA3 strain=HL096PA3 na latest Scaffold Minor Full 2011-04-05 ASM19482v2 WUGSC GCA_000194825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/825/GCF_000194825.2_ASM19482v2/ na na na haploid bacteria 2528894 2527557 60.000000 0 23 37 NCBI RefSeq GCF_000194825.2-RS_2026_01_23 2026-01-23 2502 2384 52 na GCF_000194845.1 PRJNA224116 SAMN02299429 ADWC00000000.1 na 765058 1747 Cutibacterium acnes HL096PA2 strain=HL096PA2 na latest Scaffold Major Full 2011-04-05 ASM19484v1 WUGSC GCA_000194845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/845/GCF_000194845.1_ASM19484v1/ na na na haploid bacteria 2560429 2559595 60.000000 0 19 28 NCBI RefSeq GCF_000194845.1-RS_2026_04_25 2026-04-25 2560 2439 52 na GCF_000194865.1 PRJNA224116 SAMN02299428 ADWF00000000.1 na 765061 1747 Cutibacterium acnes HL103PA1 strain=HL103PA1 na latest Scaffold Major Full 2011-04-05 ASM19486v1 WUGSC GCA_000194865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/865/GCF_000194865.1_ASM19486v1/ na na na haploid bacteria 2476841 2476406 60.000000 0 9 14 NCBI RefSeq GCF_000194865.1-RS_2026_04_14 2026-04-14 2397 2203 51 na GCF_000194905.1 PRJNA224116 SAMN02299426 ADWI00000000.1 na 765064 1747 Cutibacterium acnes HL097PA1 strain=HL097PA1 na latest Scaffold Major Full 2011-04-05 ASM19490v1 WUGSC GCA_000194905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/905/GCF_000194905.1_ASM19490v1/ na na na haploid bacteria 2520580 2519690 60.000000 0 11 21 NCBI RefSeq GCF_000194905.1-RS_2026_04_14 2026-04-14 2459 2304 52 na GCF_000194925.1 PRJNA224116 SAMN00253995 AFAY00000000.1 na 888742 267212 Neisseria bacilliformis ATCC BAA-1200 strain=ATCC BAA-1200 na latest Scaffold Major Full 2011-04-07 ASM19492v1 Baylor College of Medicine GCA_000194925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/925/GCF_000194925.1_ASM19492v1/ na assembly from type material na haploid bacteria 2470575 2434573 59.500000 0 13 68 NCBI RefSeq GCF_000194925.1-RS_2025_08_21 2025-08-21 2406 2303 54 na GCF_000194945.1 PRJNA224116 SAMN00253318 AFAZ00000000.1 na 888807 1305 Streptococcus sanguinis SK1 = NCTC 7863 strain=ATCC 10556 na latest Scaffold Major Full 2011-04-07 ASM19494v1 Baylor College of Medicine GCA_000194945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/945/GCF_000194945.1_ASM19494v1/ na assembly from type material na haploid bacteria 2280483 2278561 43.500000 0 7 13 NCBI RefSeq GCF_000194945.1-RS_2026_01_27 2026-01-27 2232 2144 41 na GCF_000194965.1 PRJNA224116 SAMN00253315 AFBA00000000.1 na 888821 1305 Streptococcus sanguinis SK1057 strain=CCUG 59330 na latest Scaffold Major Full 2011-04-07 ASM19496v1 Baylor College of Medicine GCA_000194965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/965/GCF_000194965.1_ASM19496v1/ na na na haploid bacteria 2348778 2334612 43.000000 0 5 12 NCBI RefSeq GCF_000194965.1-RS_2026_01_27 2026-01-27 2318 2236 55 na GCF_000194985.1 PRJNA224116 SAMN00260258 AFBB00000000.1 na 888062 309120 Dialister micraerophilus DSM 19965 strain=DSM 19965 na latest Scaffold Major Full 2011-04-06 ASM19498v1 Baylor College of Medicine GCA_000194985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/194/985/GCF_000194985.1_ASM19498v1/ na assembly from type material na haploid bacteria 1281836 1256095 35.500000 0 7 31 NCBI RefSeq GCF_000194985.1-RS_2026_03_31 2026-03-31 1243 1166 53 na GCF_000195025.1 PRJNA224116 SAMN00253320 AFBD00000000.1 na 888813 1305 Streptococcus sanguinis SK330 strain=CCUG 59322 na latest Scaffold Major Full 2011-04-06 ASM19502v1 Baylor College of Medicine GCA_000195025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/025/GCF_000195025.1_ASM19502v1/ na na na haploid bacteria 2415674 2413421 43.000000 0 11 20 NCBI RefSeq GCF_000195025.1-RS_2026_01_27 2026-01-27 2371 2271 53 na GCF_000195045.1 PRJNA224116 SAMN00253319 AFBE00000000.1 na 888818 1305 Streptococcus sanguinis SK408 strain=CCUG 59327 na latest Scaffold Major Full 2011-04-06 ASM19504v1 Baylor College of Medicine GCA_000195045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/045/GCF_000195045.1_ASM19504v1/ na na na haploid bacteria 2398571 2398071 43.000000 0 6 16 NCBI RefSeq GCF_000195045.1-RS_2026_01_27 2026-01-27 2367 2256 53 na GCF_000195085.1 PRJNA224116 SAMN02603337 na na 1002672 1002672 Candidatus Pelagibacter sp. IMCC9063 strain=IMCC9063 na latest Complete Genome Major Full 2011-04-05 ASM19508v1 Inha University GCA_000195085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/085/GCF_000195085.1_ASM19508v1/ na na na haploid bacteria 1284727 1284727 31.500000 1 1 1 NCBI RefSeq GCF_000195085.1-RS_2024_03_31 2024-03-31 1429 1370 38 21515764 GCF_000195105.1 PRJNA224116 SAMN02603042 na na 996285 316 Stutzerimonas stutzeri DSM 4166 strain=DSM 4166 na latest Complete Genome Major Full 2011-04-05 ASM19510v1 Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Crop Biotechnology. GCA_000195105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/105/GCF_000195105.1_ASM19510v1/ na na na haploid bacteria 4689946 4689946 64.000000 1 1 1 NCBI RefSeq GCF_000195105.1-RS_2026_02_02 2026-02-02 4430 4284 76 21515765 GCF_000195125.1 PRJNA224116 SAMN00253321 AFBF00000000.1 na 888822 1305 Streptococcus sanguinis SK1058 strain=CCUG 59331 na latest Scaffold Major Full 2011-04-08 ASM19512v1 Baylor College of Medicine GCA_000195125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/125/GCF_000195125.1_ASM19512v1/ na na na haploid bacteria 2352829 2342920 43.000000 0 4 21 NCBI RefSeq GCF_000195125.1-RS_2026_01_27 2026-01-27 2311 2217 41 na GCF_000195145.1 PRJNA224116 SAMN02469818 AFBJ00000000.1 na 797300 28450 Burkholderia pseudomallei Bp22 strain=Bp22 na latest Chromosome Major Full 2011-04-14 Bp22_1.0 Genome Institute of Singapore GCA_000195145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/145/GCF_000195145.1_Bp22_1.0/ na na na haploid bacteria 7124987 6922603 68.000000 2 2 570 NCBI RefSeq GCF_000195145.1-RS_2026_01_26 2026-01-26 6513 5997 76 20368977 GCF_000195185.1 PRJNA224116 SAMN00713600 AFAR00000000.1 na 991778 265606 Rhodopirellula baltica WH47 strain=WH47 na latest Contig Major Full 2011-04-06 ASM19518v2 MIMAS GCA_000195185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/185/GCF_000195185.1_ASM19518v2/ na na na haploid bacteria 7033319 7033319 55.500000 0 332 332 NCBI RefSeq GCF_000195185.1-RS_2025_12_03 2025-12-03 5343 5169 76 23273849 GCF_000195225.1 PRJNA224116 SAMN02471144 AFAJ00000000.1 na 987060 190895 Vibrio rotiferianus DAT722 strain=DAT722 na latest Contig Major Full 2011-04-06 ASM19522v1 The i3 Institute, University of Technology Sydney, Australia GCA_000195225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/225/GCF_000195225.1_ASM19522v1/ na na na haploid bacteria 5329516 5329516 44.500000 0 79 79 NCBI RefSeq GCF_000195225.1-RS_2026_03_20 2026-03-20 4901 4777 74 21551292 GCF_000195275.1 PRJNA224116 SAMN00713601 na reference genome 869209 167 Treponema succinifaciens DSM 2489 strain=DSM 2489 na latest Complete Genome Major Full 2011-04-07 ASM19527v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000195275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/275/GCF_000195275.1_ASM19527v1/ na assembly from type material na haploid bacteria 2897425 2897425 39.000000 2 2 2 NCBI RefSeq GCF_000195275.1-RS_2026_05_01 2026-05-01 2837 2757 65 21886863 GCF_000195295.1 PRJNA224116 SAMN00713603 na reference genome 880072 60893 Desulfobacca acetoxidans DSM 11109 strain=DSM 11109 na latest Complete Genome Major Full 2011-04-07 ASM19529v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000195295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/295/GCF_000195295.1_ASM19529v1/ na assembly from type material na haploid bacteria 3282536 3282536 53.000000 1 1 1 NCBI RefSeq GCF_000195295.1-RS_2025_08_18 2025-08-18 2979 2898 54 21886866 GCF_000195315.1 PRJNA224116 SAMN00713604 na reference genome 700015 33871 Coriobacterium glomerans PW2 strain=PW2 na latest Complete Genome Major Full 2011-04-07 ASM19531v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000195315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/315/GCF_000195315.1_ASM19531v1/ na assembly from type material na haploid bacteria 2115681 2115681 60.500000 1 1 1 NCBI RefSeq GCF_000195315.1-RS_2026_05_01 2026-05-01 1852 1784 56 na GCF_000195335.1 PRJNA224116 SAMN00713602 na reference genome 869210 186192 Marinithermus hydrothermalis DSM 14884 strain=DSM 14884 na latest Complete Genome Major Full 2011-04-07 ASM19533v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000195335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/335/GCF_000195335.1_ASM19533v1/ na assembly from type material na haploid bacteria 2269167 2269167 68.000000 1 1 1 NCBI RefSeq GCF_000195335.1-RS_2026_05_01 2026-05-01 2292 2191 60 22675595 GCF_000195395.5 PRJNA224116 SAMN01816124 na na 930782 1639 Listeria monocytogenes J1-220 strain=J1-220 na latest Complete Genome Major Full 2019-12-05 ASM19539v6 FDA GCA_000195395.6 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/395/GCF_000195395.5_ASM19539v6/ na na na haploid bacteria 3032269 3032269 38.000000 1 1 1 NCBI RefSeq GCF_000195395.5-RS_2025_03_25 2025-03-25 3058 2935 89 na GCF_000195415.1 PRJNA224116 SAMN02952920 AFBW00000000.1 na 745023 670 Vibrio parahaemolyticus 10329 strain=10329 na latest Contig Major Full 2011-04-07 ASM19541v2 FDA GCA_000195415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/415/GCF_000195415.1_ASM19541v2/ na na na haploid bacteria 5093003 5093003 45.500000 0 33 33 NCBI RefSeq GCF_000195415.1-RS_2025_06_20 2025-06-20 4708 4524 116 21551294 GCF_000195475.1 PRJNA224116 SAMN02469785 AEQS00000000.1 na 909421 190893 Vibrio coralliilyticus P1 strain=P1 na latest Contig Major Full 2011-04-08 ASM19547v2 Federal University of Rio de Janeiro GCA_000195475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/475/GCF_000195475.1_ASM19547v2/ na na na haploid bacteria 5513256 5513256 45.500000 0 255 255 NCBI RefSeq GCF_000195475.1-RS_2026_04_04 2026-04-04 5251 5072 63 21451583 GCF_000195515.1 PRJNA224116 SAMN02603399 na na 999891 1390 Bacillus amyloliquefaciens TA208 strain=TA208 na latest Complete Genome Major Full 2011-04-08 ASM19551v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000195515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/515/GCF_000195515.1_ASM19551v1/ na na na haploid bacteria 3937511 3937511 46.000000 1 1 1 NCBI RefSeq GCF_000195515.1-RS_2026_03_27 2026-03-27 4087 3881 93 21515778 GCF_000195535.1 PRJNA224116 SAMN02603513 na na 984129 263 Francisella cf. novicida Fx1 strain=Fx1 na latest Complete Genome Major Full 2011-04-08 ASM19553v1 LANL GCA_000195535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/535/GCF_000195535.1_ASM19553v1/ na na na haploid bacteria 1913619 1913619 32.500000 1 1 1 NCBI RefSeq GCF_000195535.1-RS_2026_01_30 2026-01-30 1841 1746 52 na GCF_000195555.1 PRJNA224116 SAMN02603514 na reference genome 622488 622488 Francisella hispaniensis strain=3523 na latest Complete Genome Major Full 2011-04-08 ASM19555v1 LANL GCA_000195555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/555/GCF_000195555.1_ASM19555v1/ na na na haploid bacteria 1945310 1945310 32.500000 1 1 1 NCBI RefSeq GCF_000195555.1-RS_2026_03_30 2026-03-30 1888 1811 52 na GCF_000195575.1 PRJNA224116 SAMN02603266 na na 208596 208596 Carnobacterium sp. 17-4 strain=17-4 na latest Complete Genome Major Full 2011-04-08 ASM19557v1 Georg-August-University Goettingen GCA_000195575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/575/GCF_000195575.1_ASM19557v1/ na na na haploid bacteria 2685399 2685399 35.000000 2 2 2 NCBI RefSeq GCF_000195575.1-RS_2025_08_27 2025-08-27 2584 2462 96 21551290 GCF_000195595.1 PRJNA224116 SAMN00189093 AFBL00000000.1 na 762963 712117 Actinomyces sp. oral taxon 170 str. F0386 strain=F0386 na latest Scaffold Major Full 2011-04-12 ASM19559v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000195595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/595/GCF_000195595.1_ASM19559v1/ na na na haploid bacteria 3135144 3134470 68.000000 0 76 99 NCBI RefSeq GCF_000195595.1-RS_2024_07_21 2024-07-21 2733 2623 55 na GCF_000195615.1 PRJNA224116 SAMN00189095 AFBM00000000.1 na 762984 626929 Bacteroides clarus YIT 12056 strain=YIT 12056 na latest Scaffold Major Full 2011-04-12 ASM19561v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000195615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/615/GCF_000195615.1_ASM19561v1/ na assembly from type material na haploid bacteria 3747170 3746282 45.500000 0 22 34 NCBI RefSeq GCF_000195615.1-RS_2025_07_20 2025-07-20 3075 2983 64 na GCF_000195635.1 PRJNA224116 SAMN00189096 AFBN00000000.1 reference genome 763034 626930 Bacteroides fluxus YIT 12057 strain=YIT 12057 na latest Scaffold Major Full 2011-04-12 ASM19563v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000195635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/635/GCF_000195635.1_ASM19563v1/ na assembly from type material na haploid bacteria 4330716 4330083 45.500000 0 97 117 NCBI RefSeq GCF_000195635.1-RS_2026_01_08 2026-01-08 3625 3469 63 na GCF_000195655.1 PRJNA224116 SAMN00189148 AFBO00000000.1 na 749535 749535 Klebsiella sp. MS 92-3 strain=MS 92-3 na latest Scaffold Major Full 2011-04-12 ASM19565v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000195655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/655/GCF_000195655.1_ASM19565v1/ na na na haploid bacteria 5646513 5576613 57.500000 0 180 871 NCBI RefSeq GCF_000195655.1-RS_2025_02_24 2025-02-24 5769 5424 74 na GCF_000195675.1 PRJNA224116 SAMEA1705943 na na 257310 518 Bordetella bronchiseptica RB50 strain=RB50 na latest Complete Genome Major Full 2003-08-12 ASM19567v1 Sanger Institute GCA_000195675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/675/GCF_000195675.1_ASM19567v1/ na na na haploid bacteria 5339179 5339179 68.000000 1 1 1 NCBI RefSeq GCF_000195675.1-RS_2026_02_10 2026-02-10 5096 5007 71 12910271 GCF_000195695.1 PRJNA224116 SAMEA1705915 na na 257311 519 Bordetella parapertussis 12822 strain=12822 na latest Complete Genome Major Full 2003-08-12 ASM19569v1 Sanger Institute GCA_000195695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/695/GCF_000195695.1_ASM19569v1/ na na na haploid bacteria 4773551 4773551 68.000000 1 1 1 NCBI RefSeq GCF_000195695.1-RS_2026_02_10 2026-02-10 4516 4227 67 12910271 GCF_000195715.1 PRJNA224116 SAMEA1705933 na na 257313 520 Bordetella pertussis Tohama I strain=Tohama I na latest Complete Genome Major Full 2003-08-12 ASM19571v1 Sanger Institute GCA_000195715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/715/GCF_000195715.1_ASM19571v1/ na na na haploid bacteria 4086189 4086189 67.500000 1 1 1 NCBI RefSeq GCF_000195715.1-RS_2026_02_06 2026-02-06 3918 3567 64 12910271 GCF_000195735.1 PRJNA224116 SAMEA3138318 na na 272947 782 Rickettsia prowazekii str. Madrid E strain=Madrid E na latest Complete Genome Major Full 2003-05-06 ASM19573v1 Uppsala Univ. GCA_000195735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/735/GCF_000195735.1_ASM19573v1/ na na na haploid bacteria 1111523 1111523 29.000000 1 1 1 NCBI RefSeq GCF_000195735.1-RS_2026_01_08 2026-01-08 896 823 40 9823893 GCF_000195755.1 PRJNA224116 SAMN02603973 na na 882 881 Nitratidesulfovibrio vulgaris str. Hildenborough strain=Hildenborough na latest Complete Genome Major Full 2004-04-21 ASM19575v1 TIGR GCA_000195755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/755/GCF_000195755.1_ASM19575v1/ na assembly from type material na haploid bacteria 3773159 3773159 63.500000 2 2 2 NCBI RefSeq GCF_000195755.1-RS_2025_12_12 2025-12-12 3339 3234 90 15077118 GCF_000195775.2 PRJNA224116 SAMEA3138319 na na 258594 1076 Rhodopseudomonas palustris CGA009 strain=CGA009 na latest Complete Genome Major Full 2023-02-05 ASM19577v2 DOE Joint Genome Institute GCA_000195775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/775/GCF_000195775.2_ASM19577v2/ na na na haploid bacteria 5467641 5467641 65.000000 2 2 2 NCBI RefSeq GCF_000195775.2-RS_2026_04_07 2026-04-07 5041 4937 59 14704707 GCF_000195795.1 PRJNA224116 SAMEA3138320 na na 272626 1642 Listeria innocua Clip11262 strain=Clip11262 na latest Complete Genome Major Full 2003-05-06 ASM19579v1 Institut Pasteur GCA_000195795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/795/GCF_000195795.1_ASM19579v1/ na na na haploid bacteria 3093113 3093113 37.500000 2 2 2 NCBI RefSeq GCF_000195795.1-RS_2026_02_10 2026-02-10 3219 3089 89 11679669 GCF_000195815.1 PRJNA224116 SAMEA1705951 na na 257309 1717 Corynebacterium diphtheriae NCTC 13129 strain=NCTC 13129 na latest Complete Genome Major Full 2003-11-10 ASM19581v1 Sanger Institute GCA_000195815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/815/GCF_000195815.1_ASM19581v1/ na na na haploid bacteria 2488635 2488635 53.500000 1 1 1 NCBI RefSeq GCF_000195815.1-RS_2026_02_16 2026-02-16 2364 2240 70 14602910 GCF_000195835.3 PRJNA224116 SAMEA20450668 na na 233413 1773 Mycobacterium tuberculosis variant bovis AF2122/97 na AF2122/97 latest Complete Genome Major Full 2017-01-19 ASM19583v2 School of Veterinary Medicine GCA_000195835.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/835/GCF_000195835.3_ASM19583v2/ na na na haploid bacteria 4349904 4349904 65.500000 1 1 1 NCBI RefSeq GCF_000195835.3-RS_2025_07_13 2025-07-13 4091 3802 51 na GCF_000195855.1 PRJNA224116 SAMEA1705921 na na 272631 1769 Mycobacterium leprae TN strain=TN na latest Complete Genome Major Full 2003-05-06 ASM19585v1 Sanger Institute GCA_000195855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/855/GCF_000195855.1_ASM19585v1/ na na na haploid bacteria 3268203 3268203 58.000000 1 1 1 NCBI RefSeq GCF_000195855.1-RS_2026_02_06 2026-02-06 2975 2245 51 11234002 GCF_000195875.1 PRJNA224116 SAMEA3138324 na na 272635 2107 Mycoplasmopsis pulmonis UAB CTIP strain=UAB CTIP na latest Complete Genome Major Full 2003-05-06 ASM19587v1 Genoscope GCA_000195875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/875/GCF_000195875.1_ASM19587v1/ na na na haploid bacteria 963879 963879 26.500000 1 1 1 NCBI RefSeq GCF_000195875.1-RS_2026_02_27 2026-02-27 795 753 36 11353084 GCF_000195915.1 PRJNA224116 SAMEA3138325 na reference genome 273075 2303 Thermoplasma acidophilum DSM 1728 strain=DSM 1728 na latest Complete Genome Major Full 2003-05-06 ASM19591v1 Max-Plank-Institute GCA_000195915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/915/GCF_000195915.1_ASM19591v1/ na assembly from type material na haploid archaea 1564906 1564906 46.000000 1 1 1 NCBI RefSeq GCF_000195915.1-RS_2025_11_20 2025-11-20 1604 1541 51 11029001 GCF_000195935.2 PRJNA224116 SAMEA3283067 na reference genome 272844 29292 Pyrococcus abyssi GE5 strain=Orsay na latest Complete Genome Major Full 2003-05-06 ASM19593v2 Genoscope GCA_000195935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/935/GCF_000195935.2_ASM19593v2/ na assembly from type material na haploid archaea 1768562 1768562 44.500000 2 2 2 NCBI RefSeq GCF_000195935.2-RS_2025_11_21 2025-11-21 1980 1903 61 8655503;10736225;11381026;12622808 GCF_000195955.2 PRJNA57777 SAMEA3138326 na reference genome 83332 1773 Mycobacterium tuberculosis H37Rv strain=H37Rv na latest Complete Genome Major Full 2013-02-01 ASM19595v2 Sanger Institute GCA_000195955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/955/GCF_000195955.2_ASM19595v2/ na assembly from type material na haploid bacteria 4411532 4411532 65.500000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2017-12-14 4008 3906 70 9634230;12368430;20980199 GCF_000195975.1 PRJNA224116 SAMEA3138327 na reference genome 84588 2881428 Parasynechococcus marenigrum WH 8102 strain=WH 8102 na latest Complete Genome Major Full 2003-08-18 ASM19597v1 DOE Joint Genome Institute GCA_000195975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/975/GCF_000195975.1_ASM19597v1/ na assembly from type material na haploid bacteria 2434428 2434428 59.500000 1 1 1 NCBI RefSeq GCF_000195975.1-RS_2025_11_23 2025-11-23 2711 2633 53 12917641 GCF_000195995.1 PRJNA224116 SAMEA1705914 na na 220341 28901 Salmonella enterica subsp. enterica serovar Typhi str. CT18 strain=CT18 na latest Complete Genome Major Full 2003-05-06 ASM19599v1 Sanger Institute GCA_000195995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/995/GCF_000195995.1_ASM19599v1/ na na na haploid bacteria 5133713 5133713 52.000000 3 3 3 NCBI RefSeq GCF_000195995.1-RS_2025_03_15 2025-03-15 5146 4682 114 11677608 GCF_000196015.1 PRJNA224116 SAMN02598450 na na 266264 119219 Cupriavidus metallidurans CH34 strain=CH34 na latest Complete Genome Major Full 2010-02-04 ASM19601v1 DOE Joint Genome Institute GCA_000196015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/015/GCF_000196015.1_ASM19601v1/ na assembly from type material na haploid bacteria 6913352 6913352 63.500000 4 4 4 NCBI RefSeq GCF_000196015.1-RS_2025_12_23 2025-12-23 6412 6232 79 na GCF_000196035.1 PRJNA61583 SAMEA3138329 na reference genome 169963 1639 Listeria monocytogenes EGD-e strain=EGD-e na latest Complete Genome Major Full 2003-05-06 ASM19603v1 European Consortium GCA_000196035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/035/GCF_000196035.1_ASM19603v1/ na na na haploid bacteria 2944528 2944528 38.000000 1 1 1 NCBI RefSeq Annotation submitted by NCBI RefSeq 2016-08-28 3055 2867 181 11679669;16428782;19448609 GCF_000196055.1 PRJNA224116 SAMEA3138330 na na 211110 1311 Streptococcus agalactiae NEM316 strain=NEM316 na latest Complete Genome Major Full 2003-05-06 ASM19605v1 Institut Pasteur GCA_000196055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/055/GCF_000196055.1_ASM19605v1/ na na na haploid bacteria 2211485 2211485 35.500000 1 1 1 NCBI RefSeq GCF_000196055.1-RS_2026_01_07 2026-01-07 2235 2077 105 12354221 GCF_000196075.1 PRJNA224116 SAMEA1705925 na reference genome 218496 2039 Tropheryma whipplei TW08/27 strain=TW08/27 na latest Complete Genome Major Full 2003-05-06 ASM19607v1 Sanger Institute GCA_000196075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/075/GCF_000196075.1_ASM19607v1/ na na na haploid bacteria 925938 925938 46.500000 1 1 1 NCBI RefSeq GCF_000196075.1-RS_2025_04_04 2025-04-04 903 839 57 12606174 GCF_000196095.1 PRJNA224116 SAMD00058707 na reference genome 223926 670 Vibrio parahaemolyticus RIMD 2210633 strain=RIMD 2210633 substr. RIMD 2210633 na latest Complete Genome Major Full 2004-05-11 ASM19609v1 Osaka Univ. GCA_000196095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/095/GCF_000196095.1_ASM19609v1/ na na na haploid bacteria 5165770 5165770 45.500000 2 2 2 NCBI RefSeq GCF_000196095.1-RS_2026_04_26 2026-04-26 4713 4509 165 10834969;12620739 GCF_000196115.1 PRJNA224116 SAMEA3138332 na reference genome 243090 265606 Rhodopirellula baltica SH 1 strain=1 na latest Complete Genome Major Full 2003-07-07 ASM19611v1 Max-Plank-Institute GCA_000196115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/115/GCF_000196115.1_ASM19611v1/ na assembly from type material na haploid bacteria 7145576 7145576 55.500000 1 1 1 NCBI RefSeq GCF_000196115.1-RS_2025_11_20 2025-11-20 5293 5147 89 12835416 GCF_000196135.1 PRJNA224116 SAMEA3138333 na na 273121 844 Wolinella succinogenes DSM 1740 strain=DSMZ 1740 na latest Complete Genome Major Full 2003-09-08 ASM19613v1 Max-Plank-Institute GCA_000196135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/135/GCF_000196135.1_ASM19613v1/ na assembly from type material na haploid bacteria 2110355 2110355 48.500000 1 1 1 NCBI RefSeq GCF_000196135.1-RS_2026_02_16 2026-02-16 2129 2058 53 14500908 GCF_000196155.1 PRJNA224116 SAMEA3138334 na na 243265 2218628 Photorhabdus laumondii subsp. laumondii TTO1 strain=TTO1 na latest Complete Genome Major Full 2003-10-03 ASM19615v1 Institut Pasteur GCA_000196155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/155/GCF_000196155.1_ASM19615v1/ na na na haploid bacteria 5688987 5688987 43.000000 1 1 1 NCBI RefSeq GCF_000196155.1-RS_2026_02_16 2026-02-16 5016 4721 114 14528314 GCF_000196175.1 PRJNA224116 SAMEA3138335 na reference genome 264462 959 Bdellovibrio bacteriovorus HD100 strain=HD100 na latest Complete Genome Major Full 2004-02-10 ASM19617v1 Max-Planck-Institute GCA_000196175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/175/GCF_000196175.1_ASM19617v1/ na assembly from type material na haploid bacteria 3782950 3782950 50.500000 1 1 1 NCBI RefSeq GCF_000196175.1-RS_2025_12_11 2025-12-11 3601 3549 46 14752164 GCF_000196215.1 PRJNA224116 SAMN02603240 na reference genome 290434 664662 Borreliella bavariensis PBi strain=PBi na latest Complete Genome Major Full 2004-08-30 ASM19621v1 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) GCA_000196215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/215/GCF_000196215.1_ASM19621v1/ na assembly from type material na haploid bacteria 986914 986914 28.000000 3 3 3 NCBI RefSeq GCF_000196215.1-RS_2025_09_16 2025-09-16 961 902 41 15547252 GCF_000196235.1 PRJNA224116 SAMN02598278 na na 290399 290399 Arthrobacter sp. FB24 strain=FB24 na latest Complete Genome Major Full 2006-10-24 ASM19623v1 US DOE Joint Genome Institute GCA_000196235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/235/GCF_000196235.1_ASM19623v1/ na na na haploid bacteria 5070478 5070478 65.500000 4 4 4 NCBI RefSeq GCF_000196235.1-RS_2025_08_25 2025-08-25 4653 4545 69 na GCF_000196255.1 PRJNA224116 SAMEA3138336 na na 298386 74109 Photobacterium profundum SS9 strain=SS9 na latest Complete Genome Major Full 2004-05-17 ASM19625v1 University of Padova, Italy GCA_000196255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/255/GCF_000196255.1_ASM19625v1/ na na na haploid bacteria 6403280 6403280 41.500000 3 3 3 NCBI RefSeq GCF_000196255.1-RS_2026_02_10 2026-02-10 5920 5438 223 9676237 GCF_000196275.1 PRJNA224116 SAMN02598303 na reference genome 319795 68909 Deinococcus geothermalis DSM 11300 strain=DSM 11300 na latest Complete Genome Major Full 2007-10-17 ASM19627v1 US DOE Joint Genome Institute GCA_000196275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/275/GCF_000196275.1_ASM19627v1/ na assembly from type material na haploid bacteria 3247018 3247018 66.500000 3 3 3 NCBI RefSeq GCF_000196275.1-RS_2025_12_13 2025-12-13 3172 3056 63 na GCF_000196295.1 PRJNA224116 SAMEA3138337 na na 489653 486 Neisseria lactamica 020-06 strain=020-06 na latest Complete Genome Major Full 2010-11-30 ASM19629v1 Sanger Institute GCA_000196295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/295/GCF_000196295.1_ASM19629v1/ na na na haploid bacteria 2220606 2220606 52.500000 1 1 1 NCBI RefSeq GCF_000196295.1-RS_2026_02_10 2026-02-10 2214 2026 75 21092259 GCF_000196315.1 PRJNA224116 SAMN02603922 na reference genome 216432 313588 Croceibacter atlanticus HTCC2559 strain=HTCC2559 na latest Complete Genome Major Full 2010-06-09 ASM19631v1 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000196315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/315/GCF_000196315.1_ASM19631v1/ na assembly from type material na haploid bacteria 2952962 2952962 34.000000 1 1 1 NCBI RefSeq GCF_000196315.1-RS_2025_12_11 2025-12-11 2720 2668 46 20639333 GCF_000196335.1 PRJNA224116 SAMEA3138338 na na 196627 1718 Corynebacterium glutamicum ATCC 13032 strain=DSM 20300 = ATCC 13032 na latest Complete Genome Major Full 2004-01-26 ASM19633v1 Universitaet Bielefeld GCA_000196335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/335/GCF_000196335.1_ASM19633v1/ na assembly from type material na haploid bacteria 3282708 3282708 54.000000 1 1 1 NCBI RefSeq GCF_000196335.1-RS_2026_02_16 2026-02-16 3047 2909 80 12948626 GCF_000196355.1 PRJNA224116 SAMN02598322 na reference genome 323848 1231 Nitrosospira multiformis ATCC 25196 strain=ATCC 25196 na latest Complete Genome Major Full 2005-11-15 ASM19635v1 DOE Joint Genome Institute GCA_000196355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/355/GCF_000196355.1_ASM19635v1/ na assembly from type material na haploid bacteria 3234309 3234309 54.000000 4 4 4 NCBI RefSeq GCF_000196355.1-RS_2026_03_12 2026-03-12 2925 2832 50 18390676 GCF_000196395.1 PRJNA224116 SAMN02603664 na na 382245 645 Aeromonas salmonicida subsp. salmonicida A449 strain=A449 na latest Complete Genome Major Full 2007-04-06 ASM19639v1 National Research Council Canada - Institute of Marine Biosciences GCA_000196395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/395/GCF_000196395.1_ASM19639v1/ na na na haploid bacteria 5040536 5040536 58.000000 6 6 6 NCBI RefSeq GCF_000196395.1-RS_2026_04_18 2026-04-18 4824 4427 140 12932739 GCF_000196435.1 PRJNA224116 SAMEA3138339 na reference genome 382640 85701 Bartonella tribocorum CIP 105476 strain=type strain:506 = CIP 105476 na latest Complete Genome Major Full 2007-11-25 ASM19643v1 Department of Biochemistry and Molecular Biology, Center for Comparative Genomics and Bioinformatics Center for Infectious Disease Dynamics, Penn State University GCA_000196435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/435/GCF_000196435.1_ASM19643v1/ na assembly from type material na haploid bacteria 2642404 2642404 39.000000 2 2 2 NCBI RefSeq GCF_000196435.1-RS_2026_04_23 2026-04-23 2332 2164 52 18037886 GCF_000196455.1 PRJNA224116 SAMEA3138340 na reference genome 1511 1511 Acetoanaerobium sticklandii strain=DSM 519 na latest Complete Genome Major Full 2010-10-16 ASM19645v1 Genoscope-CEA GCA_000196455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/455/GCF_000196455.1_ASM19645v1/ na assembly from type material na haploid bacteria 2715461 2715461 33.500000 1 1 1 NCBI RefSeq GCF_000196455.1-RS_2026_04_07 2026-04-07 2616 2522 81 na GCF_000196475.1 PRJNA224116 SAMEA2272210 na reference genome 291112 291112 Photorhabdus asymbiotica na ATCC43949 latest Complete Genome Major Full 2009-07-13 ASM19647v1 University of Bath GCA_000196475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/475/GCF_000196475.1_ASM19647v1/ na na na haploid bacteria 5094138 5094138 42.000000 2 2 2 NCBI RefSeq GCF_000196475.1-RS_2025_12_11 2025-12-11 4508 4261 120 19583835 GCF_000196495.1 PRJNA224116 SAMEA1705917 na reference genome 316275 40269 Aliivibrio salmonicida LFI1238 strain=LFI1238 na latest Complete Genome Major Full 2008-10-01 ASM19649v1 The Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute GCA_000196495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/495/GCF_000196495.1_ASM19649v1/ na na na haploid bacteria 4655660 4655660 39.000000 6 6 6 NCBI RefSeq GCF_000196495.1-RS_2025_12_12 2025-12-12 4516 4115 145 19099551 GCF_000196515.1 PRJNA224116 SAMN02598476 na reference genome 551115 1164 'Nostoc azollae' 0708 strain=0708 na latest Complete Genome Major Full 2010-06-14 ASM19651v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000196515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/515/GCF_000196515.1_ASM19651v1/ na na na haploid bacteria 5486145 5486145 38.500000 3 3 3 NCBI RefSeq GCF_000196515.1-RS_2026_03_30 2026-03-30 5713 4544 58 20628610 GCF_000196535.1 PRJNA224116 SAMN00001505 na reference genome 548479 2051 Mobiluncus curtisii ATCC 43063 strain=ATCC 43063 na latest Complete Genome Major Full 2010-06-14 ASM19653v1 Baylor College of Medicine GCA_000196535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/535/GCF_000196535.1_ASM19653v1/ na assembly from heterotypic synonym type material na haploid bacteria 2146480 2146480 55.500000 1 1 1 NCBI RefSeq GCF_000196535.1-RS_2026_03_30 2026-03-30 1888 1818 55 na GCF_000196555.1 PRJNA224116 SAMD00060951 na reference genome 565042 216816 Bifidobacterium longum subsp. longum JCM 1217 strain=JCM 1217 na latest Complete Genome Major Full 2011-01-28 ASM19655v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000196555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/555/GCF_000196555.1_ASM19655v1/ na assembly from type material na haploid bacteria 2385164 2385164 60.500000 1 1 1 NCBI RefSeq GCF_000196555.1-RS_2025_12_11 2025-12-11 2036 1901 93 21270894 GCF_000196575.1 PRJNA224116 SAMD00060953 na na 565040 216816 Bifidobacterium longum subsp. infantis 157F strain=157F na latest Complete Genome Major Full 2011-01-28 ASM19657v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000196575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/575/GCF_000196575.1_ASM19657v1/ na na na haploid bacteria 2408831 2408831 60.000000 3 3 3 NCBI RefSeq GCF_000196575.1-RS_2026_02_10 2026-02-10 2075 1947 77 21270894 GCF_000196595.1 PRJNA224116 SAMN00002223 na na 525381 1313 Streptococcus pneumoniae TCH8431/19A strain=TCH8431/19A na latest Complete Genome Major Full 2010-06-14 ASM19659v1 Baylor College of Medicine GCA_000196595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/595/GCF_000196595.1_ASM19659v1/ na na na haploid bacteria 2088772 2088772 40.000000 1 1 1 NCBI RefSeq GCF_000196595.1-RS_2025_12_14 2025-12-14 2156 1924 73 na GCF_000196615.1 PRJNA224116 SAMEA2272131 na reference genome 634500 182337 Erwinia billingiae Eb661 strain=Eb661 na latest Complete Genome Major Full 2010-06-22 ASM19661v1 Max Planck Society GCA_000196615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/615/GCF_000196615.1_ASM19661v1/ na na na haploid bacteria 5372268 5372268 55.000000 3 3 3 NCBI RefSeq GCF_000196615.1-RS_2025_12_11 2025-12-11 4993 4839 105 20565991 GCF_000196655.1 PRJNA224116 SAMN00015125 na reference genome 644295 2322 Methanohalobium evestigatum Z-7303 strain=Z-7303 na latest Complete Genome Major Full 2010-06-15 ASM19665v1 US DOE Joint Genome Institute GCA_000196655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/655/GCF_000196655.1_ASM19665v1/ na assembly from type material na haploid archaea 2406232 2406232 36.500000 2 2 2 NCBI RefSeq GCF_000196655.1-RS_2025_11_21 2025-11-21 2466 2357 58 na GCF_000196675.2 PRJNA224116 SAMN00713596 na reference genome 675635 228005 Pseudonocardia benzenivorans CB1190 strain=CB1190 na latest Chromosome Major Full 2011-03-28 ASM19667v2 US DOE Joint Genome Institute GCA_000196675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/675/GCF_000196675.2_ASM19667v2/ na assembly from heterotypic synonym type material na haploid bacteria 7440794 7440794 73.000000 4 6 6 NCBI RefSeq GCF_000196675.2-RS_2026_05_31 2026-05-31 7081 6904 59 21725009 GCF_000196695.1 PRJNA224116 SAMEA2272695 na na 685727 43767 Prescottella equi 103S strain=103S na latest Complete Genome Major Full 2010-11-11 ASM19669v1 IREC (International Rhodococcus equi Genome Consortium) GCA_000196695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/695/GCF_000196695.1_ASM19669v1/ na na na haploid bacteria 5043170 5043170 69.000000 1 1 1 NCBI RefSeq GCF_000196695.1-RS_2026_04_04 2026-04-04 4715 4620 67 20941392 GCF_000196735.1 PRJNA224116 SAMEA2272088 na na 692420 1390 Bacillus amyloliquefaciens DSM 7 = ATCC 23350 strain=DSM 7 na latest Complete Genome Major Full 2010-09-23 ASM19673v1 Cebitec, Bielefeld University GCA_000196735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/735/GCF_000196735.1_ASM19673v1/ na assembly from type material na haploid bacteria 3980199 3980199 46.000000 1 1 1 NCBI RefSeq GCF_000196735.1-RS_2026_02_16 2026-02-16 4151 3871 128 20817842 GCF_000196755.1 PRJNA224116 SAMEA2272698 na na 693745 210 Helicobacter pylori B8 strain=B8 na latest Complete Genome Major Full 2010-06-15 ASM19675v1 CeBitec, Bielefeld University GCA_000196755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/755/GCF_000196755.1_ASM19675v1/ na na na haploid bacteria 1680029 1680029 39.000000 2 2 2 NCBI RefSeq GCF_000196755.1-RS_2026_02_10 2026-02-10 1607 1473 45 20507619 GCF_000196795.1 PRJNA224116 SAMN02603211 na reference genome 436717 1148157 Acinetobacter oleivorans DR1 strain=DR1 na latest Complete Genome Major Full 2010-06-21 ASM19679v1 Division of Environmental Science and Ecological Engineering, Korea University GCA_000196795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/795/GCF_000196795.1_ASM19679v1/ na assembly from type material na haploid bacteria 4152543 4152543 38.500000 1 1 1 NCBI RefSeq GCF_000196795.1-RS_2025_11_23 2025-11-23 3962 3815 93 20639327 GCF_000196835.1 PRJNA224116 SAMN02603409 na na 749927 33910 Amycolatopsis mediterranei U32 strain=U32 na latest Complete Genome Major Full 2010-06-29 ASM19683v1 Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences GCA_000196835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/835/GCF_000196835.1_ASM19683v1/ na na na haploid bacteria 10236715 10236715 71.500000 1 1 1 NCBI RefSeq GCF_000196835.1-RS_2026_03_27 2026-03-27 9674 9493 69 20567260 GCF_000196855.1 PRJNA224116 SAMEA2272393 na reference genome 762550 115778 Leuconostoc gasicomitatum LMG 18811 strain=type strain: LMG 18811 na latest Complete Genome Major Full 2010-06-30 ASM19685v1 The Department of Food Hygiene and Environmental Health, University of Helsinki, P.O. Box 66 00014 University of Helsinki GCA_000196855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/855/GCF_000196855.1_ASM19685v1/ na assembly from type material na haploid bacteria 1954080 1954080 36.500000 1 1 1 NCBI RefSeq GCF_000196855.1-RS_2026_04_14 2026-04-14 1982 1878 81 21571876 GCF_000196875.2 PRJNA224116 SAMEA2272784 na reference genome 768066 2746 Halomonas elongata DSM 2581 strain=type strain: DSM 2581 na latest Complete Genome Major Full 2017-01-31 ASM19687v2 Max-Planck-Institute of Biochemistry GCA_000196875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/875/GCF_000196875.2_ASM19687v2/ na assembly from type material na haploid bacteria 4061825 4061825 63.500000 1 1 1 NCBI RefSeq GCF_000196875.2-RS_2025_11_24 2025-11-24 3808 3717 83 20849449 GCF_000196895.1 PRJNA224116 SAMN02603490 na reference genome 795797 413810 Halalkalicoccus jeotgali B3 strain=B3 na latest Complete Genome Major Full 2010-06-23 ASM19689v1 Kyung Hee University GCA_000196895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/196/895/GCF_000196895.1_ASM19689v1/ na assembly from type material na haploid archaea 3698650 3698650 62.500000 7 7 7 NCBI RefSeq GCF_000196895.1-RS_2025_11_20 2025-11-20 3928 3796 54 20601480 GCF_000197735.1 PRJNA224116 SAMEA2272213 na reference genome 861360 256701 Glutamicibacter arilaitensis Re117 strain=Re117 na latest Complete Genome Major Full 2010-09-27 ASM19773v1 I.N.R.A. , French National Institute for Agricultural Research GCA_000197735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/197/735/GCF_000197735.1_ASM19773v1/ na assembly from type material na haploid bacteria 3918192 3918192 59.500000 3 3 3 NCBI RefSeq GCF_000197735.1-RS_2025_12_10 2025-12-10 3700 3530 86 21124797 GCF_000197755.2 PRJNA224116 SAMEA2271969 na na 932919 1639 Listeria monocytogenes SLCC2755 strain=SLCC2755 na latest Complete Genome Major Full 2012-09-10 ASM19775v2 ERA-NET / Spatelis GCA_000197755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/197/755/GCF_000197755.2_ASM19775v2/ na na na haploid bacteria 3023926 3023926 38.000000 2 2 2 NCBI RefSeq GCF_000197755.2-RS_2025_07_22 2025-07-22 3006 2865 89 20824078;23339658 GCF_000197875.1 PRJNA224116 SAMEA3138342 na na 866630 727 Haemophilus influenzae F3031 strain=F3031 na latest Complete Genome Major Full 2011-01-11 ASM19787v1 The Wellcome Trust Sanger Institute GCA_000197875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/197/875/GCF_000197875.1_ASM19787v1/ na na na haploid bacteria 1985832 1985832 38.000000 1 1 1 NCBI RefSeq GCF_000197875.1-RS_2026_02_16 2026-02-16 2029 1877 81 22377449 GCF_000198775.1 PRJNA224116 SAMEA2272497 na na 882378 412963 Mycetohabitans rhizoxinica HKI 454 strain=HKI 454 B1 latest Complete Genome Major Full 2010-11-16 ASM19877v1 Leibniz Institute for Natural Product Research and Infection Biology (HKI) GCA_000198775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/198/775/GCF_000198775.1_ASM19877v1/ na assembly from type material na haploid bacteria 3750138 3750138 60.500000 3 3 3 NCBI RefSeq GCF_000198775.1-RS_2026_02_16 2026-02-16 3357 2928 61 21131495 GCF_000199675.1 PRJNA224116 SAMD00061114 na reference genome 926569 167964 Anaerolinea thermophila UNI-1 strain=UNI-1 na latest Complete Genome Major Full 2011-01-24 ASM19967v1 National Institute of Technology and Evaluation GCA_000199675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/199/675/GCF_000199675.1_ASM19967v1/ na assembly from type material na haploid bacteria 3532378 3532378 54.000000 1 1 1 NCBI RefSeq GCF_000199675.1-RS_2026_06_16 2026-06-16 3213 3135 61 na GCF_000200475.1 PRJNA224116 SAMEA2272570 na na 935897 727 Haemophilus influenzae F3047 strain=F3047 na latest Complete Genome Major Full 2011-01-11 ASM20047v1 Wellcome Trust Sanger insititute GCA_000200475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/200/475/GCF_000200475.1_ASM20047v1/ na na na haploid bacteria 2007018 2007018 38.000000 1 1 1 NCBI RefSeq GCF_000200475.1-RS_2026_02_10 2026-02-10 2044 1886 80 22377449 GCF_000200595.1 PRJNA224116 SAMEA2272759 na reference genome 936155 214 Helicobacter felis ATCC 49179 strain=ATCC 49179 na latest Complete Genome Major Full 2011-03-15 ASM20059v1 Wellcome Trust Sanger Institute GCA_000200595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/200/595/GCF_000200595.1_ASM20059v1/ na assembly from type material na haploid bacteria 1672681 1672681 44.500000 1 1 1 NCBI RefSeq GCF_000200595.1-RS_2025_12_11 2025-12-11 1708 1634 45 21402865 GCF_000202635.1 PRJNA224116 SAMD00060982 na na 979556 2033 Microbacterium testaceum StLB037 strain=StLB037 na latest Complete Genome Major Full 2011-02-10 ASM20263v1 Utsunomiya University GCA_000202635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/202/635/GCF_000202635.1_ASM20263v1/ na na na haploid bacteria 3982034 3982034 70.500000 1 1 1 NCBI RefSeq GCF_000202635.1-RS_2025_03_16 2025-03-16 3685 3619 55 21357489 GCF_000202835.1 PRJNA224116 SAMD00060977 na reference genome 926570 62140 Acidiphilium multivorum AIU301 strain=AIU301 na latest Complete Genome Major Full 2011-03-01 ASM20283v1 National Institute of Technology and Evaluation GCA_000202835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/202/835/GCF_000202835.1_ASM20283v1/ na assembly from type material na haploid bacteria 4214744 4214744 67.000000 9 9 9 NCBI RefSeq GCF_000202835.1-RS_2025_12_11 2025-12-11 4019 3853 57 na GCF_000203195.1 PRJNA224116 SAMEA2272408 na na 990317 315405 Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 strain=ATCC BAA-2069 na latest Complete Genome Major Full 2011-03-03 ASM20319v1 Herz- und Diabeteszentrum Nordrhein-Westfalen Universitätsklinik der Ruhr-Universität Bochum GCA_000203195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/195/GCF_000203195.1_ASM20319v1/ na na na haploid bacteria 2377209 2377209 37.500000 2 2 2 NCBI RefSeq GCF_000203195.1-RS_2026_02_10 2026-02-10 2397 2252 105 21824414 GCF_000203215.1 PRJNA224116 SAMEA3138343 na na 708248 57372 Mycoplasma suis KI3806 strain=KI3806 na latest Complete Genome Major Full 2011-02-17 ASM20321v1 Institute of Veterinary Bacteriology GCA_000203215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/215/GCF_000203215.1_ASM20321v1/ na na na haploid bacteria 709270 709270 31.000000 1 1 1 NCBI RefSeq GCF_000203215.1-RS_2026_02_16 2026-02-16 856 815 36 21398558 GCF_000203715.1 PRJNA224116 SAMN02472135 AFBY00000000.1 na 1001745 1313 Streptococcus pneumoniae 07AR0125 strain=07AR0125 na latest Contig Major Full 2011-04-11 ASM20371v2 Yale University GCA_000203715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/715/GCF_000203715.1_ASM20371v2/ na na na haploid bacteria 2024028 2024028 39.500000 0 346 346 NCBI RefSeq GCF_000203715.1-RS_2026_03_20 2026-03-20 2158 1939 39 21551297 GCF_000203735.1 PRJNA224116 SAMN02472137 AFBZ00000000.1 na 1001746 1313 Streptococcus pneumoniae BR1064 strain=BR1064 na latest Contig Major Full 2011-04-11 ASM20373v2 Yale University GCA_000203735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/735/GCF_000203735.1_ASM20373v2/ na na na haploid bacteria 2040715 2040715 39.500000 0 245 245 NCBI RefSeq GCF_000203735.1-RS_2026_03_20 2026-03-20 2118 1911 42 21551297 GCF_000203755.1 PRJNA224116 SAMN02472133 AFCA00000000.1 na 1001747 1313 Streptococcus pneumoniae ND6012 strain=ND6012 na latest Contig Major Full 2011-04-11 ASM20375v2 Yale University GCA_000203755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/755/GCF_000203755.1_ASM20375v2/ na na na haploid bacteria 2038065 2038065 39.500000 0 277 277 NCBI RefSeq GCF_000203755.1-RS_2026_01_21 2026-01-21 2113 1903 38 21551297 GCF_000203775.1 PRJNA224116 SAMN02472134 AFCB00000000.1 na 1001744 1313 Streptococcus pneumoniae PT8114 strain=PT8114 na latest Contig Major Full 2011-04-11 ASM20377v2 Yale University GCA_000203775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/775/GCF_000203775.1_ASM20377v2/ na na na haploid bacteria 2009905 2009905 39.500000 0 423 423 NCBI RefSeq GCF_000203775.1-RS_2026_03_20 2026-03-20 2168 1946 35 21551297 GCF_000203795.2 PRJNA225502 SAMN02746048 ADAR00000000.1 reference genome 684364 109871 Batrachochytrium dendrobatidis JAM81 strain=JAM81 na latest Scaffold Minor Full 2011-04-12 v1.1 US DOE Joint Genome Institute (JGI-PGF) GCA_000203795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/795/GCF_000203795.2_v1.1/ na na na haploid fungi 23810896 23632276 39.500000 0 62 425 US DOE Joint Genome Institute (JGI-PGF) Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) 2024-01-18 8386 8386 0 na GCF_000203835.1 PRJNA224116 SAMEA1705940 na na 100226 1902 Streptomyces coelicolor A3(2) strain=A3(2) na latest Complete Genome Major Full 2003-05-06 ASM20383v1 Sanger Institute GCA_000203835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/835/GCF_000203835.1_ASM20383v1/ na na na haploid bacteria 9054847 9054847 72.000000 3 3 3 NCBI RefSeq GCF_000203835.1-RS_2026_01_06 2026-01-06 8275 7996 87 8843436;9573173;12000953;15930493;18988741;19054329 GCF_000203855.3 PRJNA224116 SAMEA3138345 na na 220668 1590 Lactiplantibacillus plantarum WCFS1 strain=WCFS1 NCIMB8826 latest Complete Genome Major Full 2011-08-01 ASM20385v3 Wageningen Centre for Food Sciences GCA_000203855.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/855/GCF_000203855.3_ASM20385v3/ na na na haploid bacteria 3348624 3348624 44.500000 4 4 4 NCBI RefSeq GCF_000203855.3-RS_2025_12_16 2025-12-16 3180 3059 92 12566566;15746322;22156394 GCF_000203895.1 PRJNA224116 SAMN02598290 na na 318586 266 Paracoccus denitrificans PD1222 strain=PD1222 na latest Complete Genome Major Full 2006-12-13 ASM20389v1 DOE Joint Genome Institute GCA_000203895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/895/GCF_000203895.1_ASM20389v1/ na na na haploid bacteria 5236194 5236194 67.000000 3 3 3 NCBI RefSeq GCF_000203895.1-RS_2026_02_15 2026-02-15 5231 5066 65 na GCF_000203915.1 PRJNA224116 SAMN02598309 na na 339670 152480 Burkholderia ambifaria AMMD strain=AMMD na latest Complete Genome Major Full 2006-09-21 ASM20391v1 DOE Joint Genome Institute GCA_000203915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/915/GCF_000203915.1_ASM20391v1/ na assembly from type material na haploid bacteria 7528567 7528567 67.000000 4 4 4 NCBI RefSeq GCF_000203915.1-RS_2026_04_19 2026-04-19 6769 6601 91 na GCF_000203935.1 PRJNA224116 SAMN02598318 na na 94122 94122 Shewanella sp. ANA-3 strain=ANA-3 na latest Complete Genome Major Full 2006-11-08 ASM20393v1 DOE Joint Genome Institute GCA_000203935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/935/GCF_000203935.1_ASM20393v1/ na na na haploid bacteria 5251146 5251146 48.000000 2 2 2 NCBI RefSeq GCF_000203935.1-RS_2024_05_31 2024-05-31 4593 4411 137 na GCF_000203955.1 PRJNA224116 SAMN00113327 na na 331272 95486 Burkholderia cenocepacia HI2424 strain=B1 na latest Complete Genome Major Full 2006-10-25 ASM20395v1 US DOE Joint Genome Institute GCA_000203955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/955/GCF_000203955.1_ASM20395v1/ na na na haploid bacteria 7702840 7702840 67.000000 4 4 4 NCBI RefSeq GCF_000203955.1-RS_2025_06_08 2025-06-08 7051 6888 91 na GCF_000203975.2 PRJNA224116 SAMN02471702 AFCF00000000.2 na 1002340 1002340 Leisingera sp. ANG1 strain=ANG1 na latest Scaffold Major Full 2015-01-05 ASM20397v3 University of Connecticut GCA_000203975.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/975/GCF_000203975.2_ASM20397v3/ na na na haploid bacteria 4587644 4581579 63.000000 0 20 29 NCBI RefSeq GCF_000203975.2-RS_2025_08_27 2025-08-27 4397 4312 56 21551313 GCF_000203995.1 PRJNA224116 SAMN02299427 ADWH00000000.1 na 765063 1747 Cutibacterium acnes HL099PA1 strain=HL099PA1 na latest Scaffold Major Full 2011-04-12 ASM20399v1 WUGSC GCA_000203995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/203/995/GCF_000203995.1_ASM20399v1/ na na na haploid bacteria 2579876 2574141 60.000000 0 45 129 NCBI RefSeq GCF_000203995.1-RS_2026_05_02 2026-05-02 2594 2440 52 na GCF_000204015.1 PRJNA224116 SAMN02469919 ADUH00000000.1 reference genome 715226 76891 Asticcacaulis biprosthecium C19 strain=C19 na latest Scaffold Major Full 2011-04-13 ASM20401v1 Indiana University GCA_000204015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/015/GCF_000204015.1_ASM20401v1/ na assembly from type material na haploid bacteria 5411525 5302252 61.000000 0 6 317 NCBI RefSeq GCF_000204015.1-RS_2025_08_18 2025-08-18 4761 4642 50 na GCF_000204035.1 PRJNA224116 SAMN02469913 ADUI00000000.1 na 751586 293 Brevundimonas diminuta ATCC 11568 strain=ATCC 11568 na latest Scaffold Major Full 2011-04-13 ASM20403v1 Indiana University GCA_000204035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/035/GCF_000204035.1_ASM20403v1/ na assembly from type material na haploid bacteria 3369316 3240481 67.000000 0 8 302 NCBI RefSeq GCF_000204035.1-RS_2026_05_16 2026-05-16 3421 3271 54 na GCF_000204055.1 PRJNA242542 SAMN02744053 AECX00000000.1 reference genome 747676 203908 Melampsora larici-populina 98AG31 strain=98AG31 na latest Scaffold Major Full 2011-04-13 v1.0 US DOE Joint Genome Institute (JGI-PGF) GCA_000204055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/055/GCF_000204055.1_v1.0/ na na na haploid fungi 101129028 97682699 41.000000 0 462 3254 US DOE Joint Genome Institute (JGI-PGF) Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) 2023-12-29 16263 16255 0 21536894 GCF_000204075.1 PRJNA224116 SAMN02598253 na na 240292 264691 Trichormus variabilis ATCC 29413 strain=ATCC 29413 na latest Complete Genome Major Full 2005-09-15 ASM20407v1 DOE Joint Genome Institute GCA_000204075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/075/GCF_000204075.1_ASM20407v1/ na na na haploid bacteria 7105752 7105752 41.500000 5 5 5 NCBI RefSeq GCF_000204075.1-RS_2026_01_23 2026-01-23 5993 5842 63 na GCF_000204115.1 PRJNA224116 SAMN02603940 na na 998088 654 Aeromonas veronii B565 strain=B565 na latest Complete Genome Major Full 2011-04-13 ASM20411v1 The Key Laboratory of Molecular Microbiology and Technology, Ministry of Education & Feed Research Institute, Chinese Academy of GCA_000204115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/115/GCF_000204115.1_ASM20411v1/ na na na haploid bacteria 4551783 4551783 58.500000 1 1 1 NCBI RefSeq GCF_000204115.1-RS_2026_03_20 2026-03-20 4205 4035 139 21551296 GCF_000204135.1 PRJNA224116 SAMN02603383 na na 331635 85991 Chlamydia pecorum E58 strain=E58 na latest Complete Genome Major Full 2011-04-13 ASM20413v1 Institute for Genome Sciences, University Of Maryland School of Medicine GCA_000204135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/135/GCF_000204135.1_ASM20413v1/ na assembly from type material na haploid bacteria 1106197 1106197 41.000000 1 1 1 NCBI RefSeq GCF_000204135.1-RS_2026_03_27 2026-03-27 984 934 44 21571992 GCF_000204155.1 PRJNA224116 SAMN02603167 na reference genome 263358 1003110 Micromonospora maris AB-18-032 strain=AB-18-032 na latest Complete Genome Major Full 2011-04-13 ASM20415v1 CSBL at Korea University GCA_000204155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/155/GCF_000204155.1_ASM20415v1/ na assembly from type material na haploid bacteria 6732271 6732271 71.000000 2 2 2 NCBI RefSeq GCF_000204155.1-RS_2026_04_26 2026-04-26 6105 5933 65 21551311 GCF_000204175.2 PRJNA224116 SAMN02435899 AEZD00000000.1 na 984894 83554 Chlamydia psittaci Cal10 strain=Cal10 na latest Contig Major Full 2011-04-13 ASM20417v2 Institute for Genome Sciences, University Of Maryland School of Medicine GCA_000204175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/175/GCF_000204175.2_ASM20417v2/ na na na haploid bacteria 1176836 1176836 39.000000 1 4 4 NCBI RefSeq GCF_000204175.2-RS_2026_04_16 2026-04-16 1044 974 44 21622741 GCF_000204195.1 PRJNA224116 SAMN02469888 AFBG00000000.1 reference genome 999386 758826 Acidovorax radicis N35 strain=N35 na latest Contig Major Full 2011-04-13 ASM20419v1 Helmholtz Zentrum Muenchen, Department Microbe-Plant Interactions GCA_000204195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/195/GCF_000204195.1_ASM20419v1/ na assembly from type material na haploid bacteria 5530232 5530232 65.000000 0 30 30 NCBI RefSeq GCF_000204195.1-RS_2026_04_23 2026-04-23 5124 5028 58 na GCF_000204215.1 PRJNA224116 SAMN02469889 AFBH00000000.1 na 999394 758826 Acidovorax radicis N35v strain=N35v na latest Contig Major Full 2011-04-13 ASM20421v2 Helmholtz Zentrum Muenchen, Department Microbe-Plant Interactions GCA_000204215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/215/GCF_000204215.1_ASM20421v2/ na na na haploid bacteria 5530086 5530086 65.000000 0 33 33 NCBI RefSeq GCF_000204215.1-RS_2024_09_04 2024-09-04 5124 5024 58 na GCF_000204235.1 PRJNA224116 SAMN02471992 AFAM00000000.1 na 999892 2559073 Cutibacterium modestum P08 strain=P08 na latest Contig Major Full 2011-04-14 ASM20423v2 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000204235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/235/GCF_000204235.1_ASM20423v2/ na assembly from heterotypic synonym type material na haploid bacteria 2623290 2623290 60.000000 0 22 22 NCBI RefSeq GCF_000204235.1-RS_2026_03_31 2026-03-31 2504 2215 53 21571999 GCF_000204255.1 PRJNA224116 SAMN02603382 na reference genome 331636 83554 Chlamydia psittaci 6BC strain=6BC na latest Complete Genome Major Full 2011-04-14 ASM20425v1 Institute for Genome Sciences, University Of Maryland School of Medicine GCA_000204255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/255/GCF_000204255.1_ASM20425v1/ na assembly from type material na haploid bacteria 1179220 1179220 39.000000 2 2 2 NCBI RefSeq GCF_000204255.1-RS_2026_03_31 2026-03-31 1036 986 44 21622741 GCF_000204275.1 PRJNA224116 SAMN02603189 na na 1001582 1390 Bacillus amyloliquefaciens LL3 strain=LL3 na latest Complete Genome Major Full 2011-04-14 ASM20427v1 Department of Microbiology, College of Life Sciences, Nankai University,Tianjin 300071, China GCA_000204275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/275/GCF_000204275.1_ASM20427v1/ na na na haploid bacteria 4001985 4001985 45.500000 2 2 2 NCBI RefSeq GCF_000204275.1-RS_2025_09_05 2025-09-05 4172 3950 99 21551302 GCF_000204295.1 PRJNA224116 SAMN02603190 na na 1001585 300 Ectopseudomonas mendocina NK-01 strain=NK-01 na latest Complete Genome Major Full 2011-04-14 ASM20429v1 Department of Microbiology, College of Life Sciences, Nankai University,Tianjin 300071, China GCA_000204295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/295/GCF_000204295.1_ASM20429v1/ na na na haploid bacteria 5434353 5434353 62.500000 1 1 1 NCBI RefSeq GCF_000204295.1-RS_2025_11_21 2025-11-21 5114 5003 82 21551299 GCF_000204315.1 PRJNA224116 SAMN02469925 AEIG00000000.1 na 2518989 2518989 Aequoribacter fuscus strain=IMCC3088 na latest Contig Major Full 2011-04-14 ASM20431v1 Inha University GCA_000204315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/315/GCF_000204315.1_ASM20431v1/ na assembly from type material na haploid bacteria 3039623 3039623 51.500000 0 183 183 NCBI RefSeq GCF_000204315.1-RS_2026_01_27 2026-01-27 2890 2810 42 21551310 GCF_000204335.2 PRJNA224116 SAMN02595333 ACRY00000000.2 na 562983 84135 Gemella sanguinis M325 strain=M325 na latest Contig Major Full 2013-06-10 Geme_sang_M325_V2 Broad Institute GCA_000204335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/335/GCF_000204335.2_Geme_sang_M325_V2/ na na na haploid bacteria 1756105 1756105 30.000000 0 5 5 NCBI RefSeq GCF_000204335.2-RS_2026_02_08 2026-02-08 1729 1638 60 na GCF_000204355.1 PRJNA224116 SAMN02595331 ACRO00000000.1 na 562981 1379 Gemella haemolysans M341 strain=M341 na latest Scaffold Major Full 2011-04-15 Geme_haem_M341_V1 Broad Institute GCA_000204355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/355/GCF_000204355.1_Geme_haem_M341_V1/ na na na haploid bacteria 2053439 2034879 30.500000 0 27 71 NCBI RefSeq GCF_000204355.1-RS_2025_03_13 2025-03-13 2008 1899 62 na GCF_000204375.2 PRJNA224116 SAMN02470655 AESC00000000.2 na 929508 1491 Clostridium botulinum V891 strain=V891 na latest Scaffold Major Full 2015-06-17 V891_0.2 National Veterinary Institute (SVA), Sweden GCA_000204375.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/375/GCF_000204375.2_V891_0.2/ na na na haploid bacteria 3172457 3172457 28.000000 5 114 114 NCBI RefSeq GCF_000204375.2-RS_2025_06_11 2025-06-11 3169 3031 90 21486474 GCF_000204395.1 PRJNA224116 SAMN02470654 AESB00000000.1 na 929507 1491 Clostridium botulinum BKT028387 strain=BKT028387 na latest Contig Major Full 2011-04-14 ASM20439v2 National Veterinary Institute (SVA), Sweden GCA_000204395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/395/GCF_000204395.1_ASM20439v2/ na na na haploid bacteria 2833823 2833823 28.000000 0 237 237 NCBI RefSeq GCF_000204395.1-RS_2025_06_06 2025-06-06 2800 2675 74 21486474 GCF_000204415.1 PRJNA224116 SAMN02604263 na reference genome 990316 2223 Methanothrix soehngenii GP6 strain=GP6 na latest Complete Genome Major Full 2011-04-15 ASM20441v1 University of Wisconsin-Parkside GCA_000204415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/415/GCF_000204415.1_ASM20441v1/ na assembly from heterotypic synonym type material na haploid archaea 3026645 3026645 51.000000 2 2 2 NCBI RefSeq GCF_000204415.1-RS_2025_12_02 2025-12-02 3074 2940 57 21571998 GCF_000204435.1 PRJNA224116 SAMN00115034 AEXP00000000.1 na 879295 147802 Lactobacillus iners SPIN 1401G strain=SPIN 1401G na latest Contig Major Full 2011-04-15 ASM20443v1 J. Craig Venter Institute GCA_000204435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/435/GCF_000204435.1_ASM20443v1/ na na na haploid bacteria 1281027 1281027 32.500000 0 52 52 NCBI RefSeq GCF_000204435.1-RS_2025_07_30 2025-07-30 1262 1177 38 na GCF_000204455.1 PRJNA224116 SAMN00195202 AEXS00000000.1 na 908341 908341 Paenibacillus sp. HGF5 strain=HGF5 na latest Contig Major Full 2011-04-15 ASM20445v1 J. Craig Venter Institute GCA_000204455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/455/GCF_000204455.1_ASM20445v1/ na na na haploid bacteria 6950059 6950059 51.000000 0 185 185 NCBI RefSeq GCF_000204455.1-RS_2025_08_18 2025-08-18 6423 6224 82 na GCF_000204475.1 PRJNA224116 SAMN00253322 AFDP00000000.1 na 888824 1305 Streptococcus sanguinis SK1087 strain=CCUG 59333 na latest Scaffold Major Full 2011-04-18 ASM20447v1 Baylor College of Medicine GCA_000204475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/475/GCF_000204475.1_ASM20447v1/ na na na haploid bacteria 2315021 2307525 43.000000 0 7 28 NCBI RefSeq GCF_000204475.1-RS_2026_01_27 2026-01-27 2295 2191 51 na GCF_000204545.1 PRJNA224116 SAMN02472067 AERW00000000.1 na 941258 180837 Wolbachia endosymbiont wVitB of Nasonia vitripennis na wVitB latest Scaffold Major Full 2011-04-22 WVB_1.0 Vanderbilt University GCA_000204545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/545/GCF_000204545.1_WVB_1.0/ na na na haploid bacteria 1107643 1105410 34.000000 0 426 523 NCBI RefSeq GCF_000204545.1-RS_2026_01_08 2026-01-08 1179 979 44 21292630 GCF_000204565.1 PRJNA224116 SAMN02603671 na na 929506 1491 Clostridium botulinum BKT015925 strain=BKT015925 na latest Complete Genome Major Full 2011-04-18 ASM20456v1 National Veterinary Institute (SVA), Sweden GCA_000204565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/565/GCF_000204565.1_ASM20456v1/ na na na haploid bacteria 3207592 3207592 28.000000 6 6 6 NCBI RefSeq GCF_000204565.1-RS_2025_06_06 2025-06-06 3102 2933 122 21486474 GCF_000204605.1 PRJNA224116 SAMN02470039 AEYX00000000.1 na 996637 68213 Streptomyces griseoaurantiacus M045 strain=M045 na latest Contig Major Full 2011-04-19 ASM20460v1 Institute of Oceanology, Chinese Academy of Sciences GCA_000204605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/605/GCF_000204605.1_ASM20460v1/ na na na haploid bacteria 7712377 7712377 72.500000 0 46 46 NCBI RefSeq GCF_000204605.1-RS_2025_09_17 2025-09-17 6847 6629 76 21551298 GCF_000204625.1 PRJNA224116 SAMN02603319 na na 1007064 1307 Streptococcus suis ST3 strain=ST3 na latest Complete Genome Major Full 2011-04-19 ASM20462v1 Huazhong Agricultural University GCA_000204625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/625/GCF_000204625.1_ASM20462v1/ na na na haploid bacteria 2028815 2028815 41.500000 1 1 1 NCBI RefSeq GCF_000204625.1-RS_2026_03_20 2026-03-20 1997 1850 69 21572001 GCF_000204645.1 PRJNA224116 SAMN00713606 na reference genome 596154 179636 Alicycliphilus denitrificans K601 strain=K601 na latest Complete Genome Major Full 2011-04-19 ASM20464v1 US DOE Joint Genome Institute GCA_000204645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/645/GCF_000204645.1_ASM20464v1/ na assembly from type material na haploid bacteria 5070751 5070751 68.000000 2 2 2 NCBI RefSeq GCF_000204645.1-RS_2026_03_27 2026-03-27 4901 4751 67 21742888 GCF_000204665.1 PRJNA224116 SAMN02603905 na na 1006543 1280 Staphylococcus aureus subsp. aureus T0131 strain=T0131 na latest Complete Genome Major Full 2011-04-19 ASM20466v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000204665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/665/GCF_000204665.1_ASM20466v1/ na na na haploid bacteria 2913900 2913900 33.000000 1 1 1 NCBI RefSeq GCF_000204665.1-RS_2025_04_26 2025-04-26 2914 2734 74 21551295 GCF_000204685.1 PRJNA224116 SAMN01816414 AEFO00000000.1 na 882453 1452 Bacillus atrophaeus str. Dugway strain=Dugway na latest Contig Major Full 2011-04-19 ASM20468v2 Transformational Medical Technologies Program GCA_000204685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/685/GCF_000204685.1_ASM20468v2/ na na na haploid bacteria 4133946 4133946 43.000000 0 53 53 NCBI RefSeq GCF_000204685.1-RS_2026_04_21 2026-04-21 4274 3933 92 21464989 GCF_000204705.1 PRJNA224116 SAMN01816423 AEFM00000000.1 na 903520 1452 Bacillus atrophaeus ATCC 9372-1 strain=ATCC 9372-1 na latest Contig Major Full 2011-04-19 ASM20470v2 Transformational Medical Technologies Program GCA_000204705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/705/GCF_000204705.1_ASM20470v2/ na na na haploid bacteria 4106324 4106324 43.000000 0 28 28 NCBI RefSeq GCF_000204705.1-RS_2026_04_17 2026-04-17 4225 3953 72 21464989 GCF_000204725.1 PRJNA224116 SAMN01816418 AEFP00000000.1 na 720556 1452 Bacillus atrophaeus Detrick-1 strain=Detrick-1 na latest Contig Major Full 2011-04-19 ASM20472v2 Transformational Medical Technologies Program GCA_000204725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/725/GCF_000204725.1_ASM20472v2/ na na na haploid bacteria 4128080 4128080 43.000000 0 31 31 NCBI RefSeq GCF_000204725.1-RS_2026_04_17 2026-04-17 4261 3999 72 21464989 GCF_000204745.1 PRJNA224116 SAMN01816419 AEFQ00000000.1 na 720557 1452 Bacillus atrophaeus Detrick-2 strain=Detrick-2 na latest Contig Major Full 2011-04-19 ASM20474v2 Transformational Medical Technologies Program GCA_000204745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/745/GCF_000204745.1_ASM20474v2/ na na na haploid bacteria 4121167 4121167 43.000000 0 47 47 NCBI RefSeq GCF_000204745.1-RS_2026_04_19 2026-04-19 4250 3958 70 21464989 GCF_000204765.1 PRJNA224116 SAMN01816422 AEFR00000000.1 na 720558 1452 Bacillus atrophaeus Detrick-3 strain=Detrick-3 na latest Contig Major Full 2011-04-19 ASM20476v2 Transformational Medical Technologies Program GCA_000204765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/765/GCF_000204765.1_ASM20476v2/ na na na haploid bacteria 4129125 4129125 43.000000 0 30 30 NCBI RefSeq GCF_000204765.1-RS_2026_04_17 2026-04-17 4241 3980 73 21464989 GCF_000204785.1 PRJNA224116 SAMN01816416 AEFS00000000.1 na 723888 1452 Bacillus atrophaeus 1013-1 strain=1013-1 na latest Contig Major Full 2011-04-19 ASM20478v2 Transformational Medical Technologies Program GCA_000204785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/785/GCF_000204785.1_ASM20478v2/ na na na haploid bacteria 4126423 4126423 43.000000 0 28 28 NCBI RefSeq GCF_000204785.1-RS_2026_04_16 2026-04-16 4245 3988 74 21464989 GCF_000204805.1 PRJNA224116 SAMN01816417 AEFT00000000.1 na 723889 1452 Bacillus atrophaeus 1013-2 strain=1013-2 na latest Contig Major Full 2011-04-19 ASM20480v2 Transformational Medical Technologies Program GCA_000204805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/805/GCF_000204805.1_ASM20480v2/ na na na haploid bacteria 4052646 4052646 43.000000 0 28 28 NCBI RefSeq GCF_000204805.1-RS_2026_04_17 2026-04-17 4196 3947 56 21464989 GCF_000204825.1 PRJNA224116 SAMN01816424 AEFU00000000.1 na 723892 1452 Bacillus atrophaeus ATCC 9372-2 strain=ATCC 9372-2 na latest Contig Major Full 2011-04-19 ASM20482v2 Transformational Medical Technologies Program GCA_000204825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/825/GCF_000204825.1_ASM20482v2/ na na na haploid bacteria 4127435 4127435 43.000000 0 32 32 NCBI RefSeq GCF_000204825.1-RS_2026_04_19 2026-04-19 4232 3974 56 21464989 GCF_000204845.1 PRJNA224116 SAMN01816420 AEFV00000000.1 na 743710 1452 Bacillus atrophaeus ATCC 49822-1 strain=ATCC 49822-1 na latest Contig Major Full 2011-04-19 ASM20484v2 Transformational Medical Technologies Program GCA_000204845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/845/GCF_000204845.1_ASM20484v2/ na na na haploid bacteria 4126426 4126426 43.000000 0 31 31 NCBI RefSeq GCF_000204845.1-RS_2026_04_17 2026-04-17 4243 3961 78 21464989 GCF_000204865.1 PRJNA224116 SAMN01816421 AEFW00000000.1 na 743711 1452 Bacillus atrophaeus ATCC 49822-2 strain=ATCC 49822-2 na latest Contig Major Full 2011-04-19 ASM20486v2 Transformational Medical Technologies Program GCA_000204865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/865/GCF_000204865.1_ASM20486v2/ na na na haploid bacteria 4128020 4128020 43.000000 0 30 30 NCBI RefSeq GCF_000204865.1-RS_2026_04_17 2026-04-17 4242 3974 75 21464989 GCF_000204885.1 PRJNA224116 SAMN01816425 AEFX00000000.1 na 882455 1452 Bacillus atrophaeus BACI051-E strain=BACI051-E na latest Contig Major Full 2011-04-19 ASM20488v2 Transformational Medical Technologies Program GCA_000204885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/885/GCF_000204885.1_ASM20488v2/ na na na haploid bacteria 4127062 4127062 43.000000 0 35 35 NCBI RefSeq GCF_000204885.1-RS_2026_04_18 2026-04-18 4244 3989 75 21464989 GCF_000204905.1 PRJNA224116 SAMN02472056 AEFY00000000.1 na 876283 1452 Bacillus atrophaeus BACI051-N strain=BACI051-N na latest Contig Major Full 2011-04-19 ASM20490v2 Transformational Medical Technologies Program GCA_000204905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/905/GCF_000204905.1_ASM20490v2/ na na na haploid bacteria 4129706 4129706 43.000000 0 78 78 NCBI RefSeq GCF_000204905.1-RS_2026_04_19 2026-04-19 4280 3999 79 21464989 GCF_000204925.1 PRJNA224116 SAMN02603221 na reference genome 1006006 1006005 Metallosphaera cuprina Ar-4 strain=Ar-4 na latest Complete Genome Major Full 2011-04-19 ASM20492v1 Environmental Microbiology Research Center (EMRC) GCA_000204925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/925/GCF_000204925.1_ASM20492v1/ na assembly from type material na haploid archaea 1840348 1840348 42.000000 1 1 1 NCBI RefSeq GCF_000204925.1-RS_2025_08_18 2025-08-18 1978 1911 51 21551305 GCF_000204985.1 PRJNA224116 SAMN02603892 na na 909954 33959 Lactobacillus johnsonii DPC 6026 strain=DPC 6026 na latest Complete Genome Major Full 2011-04-20 ASM20498v1 Teagasc, Food research centre, Moorepark, Fermoy, Co. Cork, Ireland GCA_000204985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/204/985/GCF_000204985.1_ASM20498v1/ na na na haploid bacteria 1966342 1966342 35.000000 1 1 1 NCBI RefSeq GCF_000204985.1-RS_2026_03_31 2026-03-31 1906 1786 70 21533100 GCF_000205025.1 PRJNA224116 SAMN00189152 AFBP00000000.1 reference genome 762966 487175 Parasutterella excrementihominis YIT 11859 strain=YIT 11859 na latest Scaffold Major Full 2011-04-20 ASM20502v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000205025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/025/GCF_000205025.1_ASM20502v1/ na assembly from type material na haploid bacteria 2831696 2831540 48.000000 0 93 103 NCBI RefSeq GCF_000205025.1-RS_2026_04_26 2026-04-26 2592 2508 60 na GCF_000205165.1 PRJNA224116 SAMN00189151 AFBR00000000.1 na 762982 454155 Paraprevotella xylaniphila YIT 11841 strain=YIT 11841 na latest Scaffold Major Full 2011-04-20 ASM20516v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000205165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/165/GCF_000205165.1_ASM20516v1/ na assembly from type material na haploid bacteria 3789812 3789431 48.500000 0 87 99 NCBI RefSeq GCF_000205165.1-RS_2025_07_15 2025-07-15 3071 2958 64 na GCF_000205325.1 PRJNA224116 SAMN00117468 AFED00000000.1 na 904347 1282 Staphylococcus epidermidis VCU144 strain=VCU144 na latest Contig Major Full 2011-04-20 ASM20532v2 J. Craig Venter Institute GCA_000205325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/325/GCF_000205325.1_ASM20532v2/ na na na haploid bacteria 2413678 2413678 32.000000 0 72 72 NCBI RefSeq GCF_000205325.1-RS_2025_07_30 2025-07-30 2365 2160 64 na GCF_000205345.1 PRJNA224116 SAMN02436549 AFEE00000000.1 na 904725 1280 Staphylococcus aureus subsp. aureus 21189 strain=21189 na latest Contig Major Full 2011-04-20 ASM20534v2 J. Craig Venter Institute GCA_000205345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/345/GCF_000205345.1_ASM20534v2/ na na na haploid bacteria 2782601 2782601 32.500000 0 61 61 NCBI RefSeq GCF_000205345.1-RS_2025_08_16 2025-08-16 2826 2697 38 na GCF_000205365.1 PRJNA224116 SAMN02436469 AFEF00000000.1 na 904723 1280 Staphylococcus aureus subsp. aureus 21172 strain=21172 na latest Contig Major Full 2011-04-20 ASM20536v2 J. Craig Venter Institute GCA_000205365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/365/GCF_000205365.1_ASM20536v2/ na na na haploid bacteria 2690465 2690465 32.500000 0 31 31 NCBI RefSeq GCF_000205365.1-RS_2025_08_16 2025-08-16 2679 2536 64 na GCF_000205385.1 PRJNA224116 SAMN02436550 AFEG00000000.1 na 904726 1280 Staphylococcus aureus subsp. aureus 21193 strain=21193 na latest Contig Major Full 2011-04-20 ASM20538v2 J. Craig Venter Institute GCA_000205385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/385/GCF_000205385.1_ASM20538v2/ na na na haploid bacteria 2735354 2735354 32.500000 0 28 28 NCBI RefSeq GCF_000205385.1-RS_2025_08_18 2025-08-18 2731 2516 65 na GCF_000205405.1 PRJNA224116 SAMN00116866 AFEH00000000.1 na 904317 1282 Staphylococcus epidermidis VCU028 strain=VCU028 na latest Contig Major Full 2011-04-20 ASM20540v2 J. Craig Venter Institute GCA_000205405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/405/GCF_000205405.1_ASM20540v2/ na na na haploid bacteria 2449850 2449850 32.000000 0 61 61 NCBI RefSeq GCF_000205405.1-RS_2025_07_30 2025-07-30 2407 2237 65 na GCF_000205425.1 PRJNA224116 SAMN00116874 AFEI00000000.1 na 904321 1282 Staphylococcus epidermidis VCU045 strain=VCU045 na latest Contig Major Full 2011-04-20 ASM20542v2 J. Craig Venter Institute GCA_000205425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/205/425/GCF_000205425.1_ASM20542v2/ na na na haploid bacteria 2481665 2481665 32.000000 0 62 62 NCBI RefSeq GCF_000205425.1-RS_2025_07_30 2025-07-30 2413 2251 69 na GCF_000208385.1 PRJNA224116 SAMN00713608 na reference genome 760011 273376 Parasphaerochaeta coccoides DSM 17374 strain=DSM 17374 na latest Complete Genome Major Full 2011-04-21 ASM20838v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000208385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/385/GCF_000208385.1_ASM20838v1/ na assembly from type material na haploid bacteria 2227296 2227296 50.500000 1 1 1 NCBI RefSeq GCF_000208385.1-RS_2025_07_22 2025-07-22 1905 1835 59 22768363 GCF_000208405.1 PRJNA224116 SAMN00713607 na reference genome 546271 69823 Selenomonas sputigena ATCC 35185 strain=ATCC 35185 na latest Complete Genome Major Full 2011-04-21 ASM20840v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000208405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/405/GCF_000208405.1_ASM20840v1/ na assembly designated as neotype na haploid bacteria 2568361 2568361 57.000000 1 1 1 NCBI RefSeq GCF_000208405.1-RS_2025_12_09 2025-12-09 2385 2296 70 na GCF_000208425.1 PRJNA224116 SAMN02469843 AEJU00000000.1 na 909209 208962 Escherichia albertii TW08933 strain=TW08933 na latest Contig Major Full 2011-04-21 ASM20842v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/425/GCF_000208425.1_ASM20842v2/ na na na haploid bacteria 4513494 4513494 49.500000 0 370 370 NCBI RefSeq GCF_000208425.1-RS_2026_03_28 2026-03-28 4504 4099 35 21482770 GCF_000208445.1 PRJNA224116 SAMN02469834 AEJV00000000.1 na 754330 754330 Escherichia sp. TW09276 strain=TW09276 na latest Contig Major Full 2011-04-21 ASM20844v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/445/GCF_000208445.1_ASM20844v2/ na na na haploid bacteria 4473145 4473145 50.500000 0 328 328 NCBI RefSeq GCF_000208445.1-RS_2024_07_01 2024-07-01 4401 4183 32 21482770 GCF_000208465.1 PRJNA224116 SAMN02469839 AEJW00000000.1 na 754327 754327 Escherichia sp. TW09231 strain=TW09231 na latest Contig Major Full 2011-04-21 ASM20846v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/465/GCF_000208465.1_ASM20846v2/ na na na haploid bacteria 4736748 4736748 50.500000 0 495 495 NCBI RefSeq GCF_000208465.1-RS_2025_08_27 2025-08-27 4867 4535 30 21482770 GCF_000208485.1 PRJNA224116 SAMN02469832 AEJX00000000.1 na 910237 910237 Escherichia sp. TW15838 strain=TW15838 na latest Contig Major Full 2011-04-21 ASM20848v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/485/GCF_000208485.1_ASM20848v2/ na na na haploid bacteria 5265422 5265422 50.000000 0 517 517 NCBI RefSeq GCF_000208485.1-RS_2025_08_27 2025-08-27 5306 4995 37 21482770 GCF_000208505.1 PRJNA224116 SAMN02469844 AEJY00000000.1 na 910238 208962 Escherichia albertii TW15818 strain=TW15818 na latest Contig Major Full 2011-04-21 ASM20850v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/505/GCF_000208505.1_ASM20850v2/ na na na haploid bacteria 4725874 4725874 49.500000 0 392 392 NCBI RefSeq GCF_000208505.1-RS_2025_12_26 2025-12-26 4678 4422 31 21482770 GCF_000208525.1 PRJNA224116 SAMN02469845 AEJZ00000000.1 na 754336 754336 Escherichia sp. TW14182 strain=TW14182 na latest Contig Major Full 2011-04-21 ASM20852v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/525/GCF_000208525.1_ASM20852v2/ na na na haploid bacteria 4679425 4679425 50.500000 0 533 533 NCBI RefSeq GCF_000208525.1-RS_2025_08_18 2025-08-18 4780 4462 28 21482770 GCF_000208545.1 PRJNA224116 SAMN02469840 AEKA00000000.1 na 754332 754332 Escherichia sp. TW10509 strain=TW10509 na latest Contig Major Full 2011-04-21 ASM20854v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/545/GCF_000208545.1_ASM20854v2/ na na na haploid bacteria 5191154 5191154 50.500000 0 453 453 NCBI RefSeq GCF_000208545.1-RS_2025_02_01 2025-02-01 5231 4923 37 21482770 GCF_000208565.1 PRJNA224116 SAMN02469841 AEME00000000.1 na 754331 754331 Escherichia sp. TW09308 strain=TW09308 na latest Contig Major Full 2011-04-21 ASM20856v2 Georgia Institute of Technology, School of Civil and Environmental Engineering GCA_000208565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/565/GCF_000208565.1_ASM20856v2/ na na na haploid bacteria 4809826 4809826 50.500000 0 1 1 NCBI RefSeq GCF_000208565.1-RS_2025_08_27 2025-08-27 4804 4428 77 21482770 GCF_000208695.1 PRJNA224116 SAMD00036546 BABZ00000000.1 na 908247 1280 Staphylococcus aureus 16K strain=16K na latest Contig Major Full 2011-01-18 ASM20869v1 Division of Bacteriology, Department of Infectious Disease Control and International Medicine, Niigata University Graduate School of Medical and Dental Sciences GCA_000208695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/695/GCF_000208695.1_ASM20869v1/ na na na haploid bacteria 2833139 2833139 32.500000 0 107 107 NCBI RefSeq GCF_000208695.1-RS_2025_09_16 2025-09-16 2864 2687 63 na GCF_000208725.1 PRJNA224116 SAMEA2272004 CABY00000000.1 na 681573 1336 Streptococcus equi subsp. zooepidemicus BHS5 strain=BHS5 na latest Scaffold Major Full 2010-11-22 ASM20872v1 Centre for Genomic Research. University of Liverpool GCA_000208725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/725/GCF_000208725.1_ASM20872v1/ na na na haploid bacteria 2139529 2097044 41.500000 0 11 61 NCBI RefSeq GCF_000208725.1-RS_2025_08_18 2025-08-18 2022 1901 41 20713629 GCF_000208825.1 PRJNA224116 SAMEA2272404 CACP00000000.1 na 878320 648 Aeromonas caviae Ae398 strain=Ae398 na latest Contig Major Full 2010-12-01 ASM20882v1 The University of Queensland GCA_000208825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/208/825/GCF_000208825.1_ASM20882v1/ na na na haploid bacteria 4439218 4439218 61.500000 0 149 149 NCBI RefSeq GCF_000208825.1-RS_2026_03_20 2026-03-20 4199 4041 84 21183677 GCF_000209165.1 PRJNA18881 SAMN02746101 AAVQ00000000.1 reference genome 322104 4924 Scheffersomyces stipitis CBS 6054 strain=CBS 6054 na latest Chromosome Major Full 2007-02-26 ASM20916v1 DOE Joint Genome Institute GCA_000209165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/165/GCF_000209165.1_ASM20916v1/ na na na haploid fungi 15441179 15441079 41.000000 8 8 9 DOE Joint Genome Institute GCF_000209165.1-RS_2026_03 2026-03-04 5815 5814 1 17334359 GCF_000209575.2 PRJNA224116 SAMN02470035 AFEZ00000000.2 na 1004957 29459 Brucella melitensis bv. 1 str. M5 strain=M5 na latest Contig Major Full 2014-01-14 ASM20957v2 Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences GCA_000209575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/575/GCF_000209575.2_ASM20957v2/ na na na haploid bacteria 3277964 3277964 57.500000 0 30 30 NCBI RefSeq GCF_000209575.2-RS_2026_05_31 2026-05-31 3218 2968 55 21602346 GCF_000209595.2 PRJNA224116 SAMN02470028 AFFA00000000.2 na 1004956 29459 Brucella melitensis bv. 1 str. M28-12 strain=M28-12 na latest Contig Major Full 2014-01-14 ASM20959v2 Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences GCA_000209595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/595/GCF_000209595.2_ASM20959v2/ na na na haploid bacteria 3278734 3278734 57.500000 0 29 29 NCBI RefSeq GCF_000209595.2-RS_2026_06_01 2026-06-01 3220 2971 55 21602346 GCF_000209615.2 PRJNA224116 SAMN02470029 AFFB00000000.2 na 1004955 29459 Brucella melitensis bv. 1 str. M111 strain=M111 na latest Contig Major Full 2014-01-14 ASM20961v2 Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences GCA_000209615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/615/GCF_000209615.2_ASM20961v2/ na na na haploid bacteria 3279805 3279805 57.500000 0 32 32 NCBI RefSeq GCF_000209615.2-RS_2026_06_01 2026-06-01 3222 2977 56 21602346 GCF_000209635.2 PRJNA224116 SAMN02470031 AFFC00000000.2 na 1004954 29461 Brucella suis bv. 1 str. S2 strain=S2 na latest Contig Major Full 2014-01-14 ASM20963v2 Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences GCA_000209635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/635/GCF_000209635.2_ASM20963v2/ na na na haploid bacteria 3283723 3283723 57.500000 0 28 28 NCBI RefSeq GCF_000209635.2-RS_2025_08_08 2025-08-08 3199 2982 56 21602346 GCF_000209655.1 PRJNA224116 SAMN02603906 na na 1007105 1007105 Pusillimonas sp. T7-7 strain=T7-7 na latest Complete Genome Major Full 2011-04-26 ASM20965v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000209655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/655/GCF_000209655.1_ASM20965v1/ na na na haploid bacteria 3924810 3924810 57.000000 2 2 2 NCBI RefSeq GCF_000209655.1-RS_2024_08_13 2024-08-13 3715 3616 57 21622753 GCF_000209675.1 PRJNA224116 SAMN02604222 na na 1005058 750 Gallibacterium anatis UMN179 strain=UMN179 na latest Complete Genome Major Full 2011-04-26 ASM20967v1 University of Minnesota GCA_000209675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/675/GCF_000209675.1_ASM20967v1/ na na na haploid bacteria 2694139 2694139 40.000000 2 2 2 NCBI RefSeq GCF_000209675.1-RS_2026_02_06 2026-02-06 2587 2442 80 21602325 GCF_000209735.1 PRJNA224116 SAMD00060938 na na 496833 2115 Mycoplasmopsis fermentans PG18 strain=PG18 na latest Chromosome Major Full 2009-06-02 ASM20973v1 M Bio Technology Incorporation GCA_000209735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/735/GCF_000209735.1_ASM20973v1/ na assembly from type material na haploid bacteria 1004014 1002014 27.000000 1 1 21 NCBI RefSeq GCF_000209735.1-RS_2026_02_26 2026-02-26 943 866 41 19219498 GCF_000209755.1 PRJNA224116 SAMEA2272406 na na 563174 1639 Listeria monocytogenes L99 strain=L99 na latest Complete Genome Major Full 2010-09-22 ASM20975v1 Justus-Liebig-University Giessen GCA_000209755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/755/GCF_000209755.1_ASM20975v1/ na na na haploid bacteria 2979198 2979198 38.000000 1 1 1 NCBI RefSeq GCF_000209755.1-RS_2025_03_15 2025-03-15 3043 2929 88 23339658 GCF_000209795.2 PRJNA224116 SAMD00016353 na na 645657 1423 Bacillus subtilis subsp. natto BEST195 strain=BEST195 na latest Complete Genome Major Full 2014-05-22 ASM20979v2 Keio University GCA_000209795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/795/GCF_000209795.2_ASM20979v2/ na na na haploid bacteria 4111218 4111218 43.500000 2 2 2 NCBI RefSeq GCF_000209795.2-RS_2025_05_21 2025-05-21 4391 4044 122 20398357;25329997 GCF_000209835.1 PRJNA224116 SAMEA3138351 na na 657323 657323 Ruminococcus sp. SR1/5 strain=SR1/5 na latest Chromosome Major Full 2010-03-25 ASM20983v1 MetaHIT GCA_000209835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/835/GCF_000209835.1_ASM20983v1/ na na na haploid bacteria 3545606 3511612 44.000000 1 1 68 NCBI RefSeq GCF_000209835.1-RS_2024_07_01 2024-07-01 3652 3345 51 na GCF_000209855.1 PRJNA224116 SAMEA3138352 na na 657322 853 Faecalibacterium prausnitzii SL3/3 strain=SL3/3 na latest Chromosome Major Full 2010-04-23 ASM20985v1 MetaHIT GCA_000209855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/855/GCF_000209855.1_ASM20985v1/ na na na haploid bacteria 3214418 3165876 55.500000 1 1 95 NCBI RefSeq GCF_000209855.1-RS_2026_04_16 2026-04-16 3220 3076 74 na GCF_000209935.1 PRJNA224116 SAMEA3138356 na na 657318 39491 Agathobacter rectalis DSM 17629 strain=DSM 17629 na latest Chromosome Major Full 2010-03-25 ASM20993v1 MetaHIT GCA_000209935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/935/GCF_000209935.1_ASM20993v1/ na na na haploid bacteria 3344951 3259030 41.500000 1 1 90 NCBI RefSeq GCF_000209935.1-RS_2026_02_27 2026-02-27 3225 3103 50 na GCF_000209955.1 PRJNA224116 SAMEA3138357 na na 657317 39491 Agathobacter rectalis M104/1 strain=M104/1 na latest Chromosome Major Full 2010-03-25 ASM20995v1 MetaHIT GCA_000209955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/955/GCF_000209955.1_ASM20995v1/ na na na haploid bacteria 3698419 3566572 40.500000 1 1 128 NCBI RefSeq GCF_000209955.1-RS_2026_02_28 2026-02-28 3557 3412 57 na GCF_000209995.1 PRJNA224116 SAMEA3138359 na na 657315 166486 Roseburia intestinalis M50/1 strain=M50/1 na latest Chromosome Major Full 2010-03-25 ASM20999v1 MetaHIT GCA_000209995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/995/GCF_000209995.1_ASM20999v1/ na na na haploid bacteria 4143550 4060667 42.500000 1 1 144 NCBI RefSeq GCF_000209995.1-RS_2026_02_27 2026-02-27 3902 3707 58 na GCF_000210015.1 PRJNA224116 SAMEA3138360 na na 657314 40520 Blautia obeum A2-162 strain=A2-162 na latest Chromosome Major Full 2010-04-23 ASM21001v1 MetaHIT GCA_000210015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/015/GCF_000210015.1_ASM21001v1/ na na na haploid bacteria 3757491 3692227 42.500000 1 1 87 NCBI RefSeq GCF_000210015.1-RS_2025_03_21 2025-03-21 3577 3395 49 na GCF_000210035.1 PRJNA224116 SAMEA3138361 na na 657313 33039 [Ruminococcus] torques L2-14 strain=L2-14 na latest Chromosome Major Full 2010-03-25 ASM21003v1 MetaHIT GCA_000210035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/035/GCF_000210035.1_ASM21003v1/ na na na haploid bacteria 3341681 3277778 41.000000 1 1 92 NCBI RefSeq GCF_000210035.1-RS_2025_03_21 2025-03-21 3135 3006 53 na GCF_000210055.1 PRJNA224116 SAMEA3138362 na na 657308 471189 Gordonibacter pamelaeae 7-10-1-b strain=7-10-1-bT na latest Chromosome Major Full 2010-04-23 ASM21005v1 MetaHIT GCA_000210055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/055/GCF_000210055.1_ASM21005v1/ na assembly from type material na haploid bacteria 3608022 3329559 65.500000 1 1 690 NCBI RefSeq GCF_000210055.1-RS_2026_02_10 2026-02-10 3432 3207 53 na GCF_000210075.1 PRJNA224116 SAMEA3138363 na na 657309 371601 Bacteroides xylanisolvens XB1A strain=XB1A na latest Chromosome Major Full 2010-04-23 ASM21007v1 MetaHIT GCA_000210075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/075/GCF_000210075.1_ASM21007v1/ na assembly from type material na haploid bacteria 5976145 5800817 42.000000 1 1 230 NCBI RefSeq GCF_000210075.1-RS_2025_12_22 2025-12-22 4707 4425 62 na GCF_000210095.1 PRJNA224116 SAMEA3138364 na reference genome 213810 1161942 Ruminococcus champanellensis 18P13 = JCM 17042 strain=type strain: 18P13 na latest Chromosome Major Full 2010-03-25 ASM21009v1 MetaHIT GCA_000210095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/095/GCF_000210095.1_ASM21009v1/ na assembly from type material na haploid bacteria 2573208 2513384 53.500000 1 1 92 NCBI RefSeq GCF_000210095.1-RS_2026_03_30 2026-03-30 2398 2323 51 na GCF_000210155.1 PRJNA224116 SAMN02604215 na na 663917 35554 Geobacter sulfurreducens KN400 strain=KN400 na latest Complete Genome Major Full 2010-06-17 ASM21015v1 University of Massachusetts, Amherst GCA_000210155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/155/GCF_000210155.1_ASM21015v1/ na na na haploid bacteria 3714272 3714272 61.000000 1 1 1 NCBI RefSeq GCF_000210155.1-RS_2026_03_30 2026-03-30 3381 3315 58 20544019;22967216 GCF_000210315.1 PRJNA224116 SAMN02604166 na na 685039 1280 Staphylococcus aureus subsp. aureus ED133 strain=ED133 na latest Complete Genome Major Full 2010-06-21 ASM21031v1 University of Edinburgh GCA_000210315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/315/GCF_000210315.1_ASM21031v1/ na na na haploid bacteria 2832478 2832478 33.000000 1 1 1 NCBI RefSeq GCF_000210315.1-RS_2025_02_14 2025-02-14 2846 2672 78 20624747 GCF_000210375.1 PRJNA224116 SAMD00060970 na na 696747 118562 Limnospira platensis NIES-39 strain=NIES-39 na latest Chromosome Major Full 2010-03-25 ASM21037v1 National Institute of Technology and Evaluation GCA_000210375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/375/GCF_000210375.1_ASM21037v1/ na na na haploid bacteria 6788435 6692865 44.500000 1 1 18 NCBI RefSeq GCF_000210375.1-RS_2025_08_18 2025-08-18 6481 6079 50 20203057 GCF_000210395.1 PRJNA224116 SAMEA3138366 na na 699037 1496 Clostridioides difficile M68 strain=M68 na latest Chromosome Major Full 2010-03-24 ASM21039v1 Wellcome Trust Sanger Institute GCA_000210395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/395/GCF_000210395.1_ASM21039v1/ na na na haploid bacteria 4308325 4306425 29.000000 1 1 20 NCBI RefSeq GCF_000210395.1-RS_2026_03_07 2026-03-07 4003 3800 152 20368420 GCF_000210415.1 PRJNA224116 SAMEA3138367 na na 699036 1496 Clostridioides difficile CF5 strain=CF5 na latest Complete Genome Major Full 2010-03-24 ASM21041v1 Wellcome Trust Sanger Institute GCA_000210415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/415/GCF_000210415.1_ASM21041v1/ na na na haploid bacteria 4159517 4159517 28.500000 1 1 1 NCBI RefSeq GCF_000210415.1-RS_2026_03_07 2026-03-07 3818 3679 95 20368420 GCF_000210435.1 PRJNA224116 SAMEA3138368 na na 699035 1496 Clostridioides difficile M120 strain=M120 na latest Complete Genome Major Full 2010-03-24 ASM21043v1 Wellcome Trust Sanger Institute GCA_000210435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/435/GCF_000210435.1_ASM21043v1/ na na na haploid bacteria 4047729 4047729 28.500000 1 1 1 NCBI RefSeq GCF_000210435.1-RS_2026_03_07 2026-03-07 3723 3545 123 20368420 GCF_000210455.1 PRJNA224116 SAMEA3138369 na na 699033 1496 Clostridioides difficile 2007855 strain=2007855 na latest Complete Genome Major Full 2010-03-24 ASM21045v1 Wellcome Trust Sanger Institute GCA_000210455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/455/GCF_000210455.1_ASM21045v1/ na na na haploid bacteria 4179867 4179867 28.500000 1 1 1 NCBI RefSeq GCF_000210455.1-RS_2026_02_28 2026-02-28 3809 3651 96 na GCF_000210475.1 PRJNA224116 SAMEA2272237 na na 316401 562 Escherichia coli ETEC H10407 strain=ETEC H10407 na latest Complete Genome Major Full 2010-10-21 ASM21047v1 Wellcome Trust Sanger Institute GCA_000210475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/475/GCF_000210475.1_ASM21047v1/ na assembly designated as clade exemplar na haploid bacteria 5325888 5325888 50.500000 5 5 5 NCBI RefSeq GCF_000210475.1-RS_2025_06_09 2025-06-09 5327 4915 126 20802035 GCF_000210495.1 PRJNA224116 SAMEA2271937 na na 634464 813 Chlamydia trachomatis Sweden2 strain=Sweden2 na latest Complete Genome Major Full 2010-02-23 ASM21049v1 Wellcome Trust Sanger Institute GCA_000210495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/495/GCF_000210495.1_ASM21049v1/ na na na haploid bacteria 1042839 1042839 41.500000 1 1 1 NCBI RefSeq GCF_000210495.1-RS_2025_03_16 2025-03-16 951 892 46 20093289 GCF_000210575.1 PRJNA224116 SAMEA3138370 na na 717959 328814 Alistipes shahii WAL 8301 strain=WAL 8301 na latest Chromosome Major Full 2010-03-25 ASM21057v1 metaHIT GCA_000210575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/575/GCF_000210575.1_ASM21057v1/ na assembly from type material na haploid bacteria 3763317 3649672 57.500000 1 1 197 NCBI RefSeq GCF_000210575.1-RS_2026_01_09 2026-01-09 3177 3023 51 na GCF_000210595.1 PRJNA224116 SAMEA3138371 na na 751585 751585 Coprococcus sp. ART55/1 strain=ART55/1 na latest Chromosome Major Full 2010-04-23 ASM21059v1 metaHIT GCA_000210595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/595/GCF_000210595.1_ASM21059v1/ na na na haploid bacteria 3123007 2888045 44.500000 1 1 361 NCBI RefSeq GCF_000210595.1-RS_2025_08_25 2025-08-25 2830 2637 30 na GCF_000210655.1 PRJNA224116 SAMEA3138374 na na 718255 166486 Roseburia intestinalis XB6B4 strain=XB6B4 na latest Chromosome Major Full 2010-03-25 ASM21065v1 metaHIT GCA_000210655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/655/GCF_000210655.1_ASM21065v1/ na na na haploid bacteria 4286292 4164855 42.500000 1 1 154 NCBI RefSeq GCF_000210655.1-RS_2026_02_27 2026-02-27 3996 3764 70 na GCF_000210715.1 PRJNA224116 SAMEA3138377 na na 651822 651822 Fretibacterium fastidiosum strain=SGP1 na latest Chromosome Major Full 2010-04-23 ASM21071v1 metaHIT GCA_000210715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/715/GCF_000210715.1_ASM21071v1/ na assembly from type material na haploid bacteria 2728333 2456866 63.000000 1 1 362 NCBI RefSeq GCF_000210715.1-RS_2026_04_16 2026-04-16 2468 2320 46 na GCF_000210735.1 PRJNA224116 SAMEA3138378 na na 718252 853 Faecalibacterium prausnitzii L2-6 strain=L2/6 na latest Chromosome Major Full 2010-04-23 ASM21073v1 metaHIT GCA_000210735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/735/GCF_000210735.1_ASM21073v1/ na na na haploid bacteria 3321367 3248273 57.000000 1 1 165 NCBI RefSeq GCF_000210735.1-RS_2025_06_08 2025-06-08 3286 3142 63 na GCF_000210755.1 PRJNA224116 SAMEA3138379 na na 722911 216816 Bifidobacterium longum subsp. longum F8 strain=F8 na latest Chromosome Major Full 2010-03-25 ASM21075v1 metaHIT GCA_000210755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/755/GCF_000210755.1_ASM21075v1/ na na na haploid bacteria 2384987 2372585 60.000000 1 1 21 NCBI RefSeq GCF_000210755.1-RS_2026_02_10 2026-02-10 2030 1905 64 na GCF_000210795.2 PRJNA224116 SAMEA2272162 na na 863767 1639 Listeria monocytogenes serotype 7 str. SLCC2482 strain=SLCC2482 na latest Chromosome Major Full 2012-09-10 ASM21079v2 ERA-NET / Spatelis GCA_000210795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/795/GCF_000210795.2_ASM21079v2/ na na na haploid bacteria 2986789 2986689 38.000000 2 2 3 NCBI RefSeq GCF_000210795.2-RS_2025_05_18 2025-05-18 2977 2814 89 20824078;23339658 GCF_000210815.2 PRJNA224116 SAMEA2272627 na na 932920 1639 Listeria monocytogenes SLCC2372 strain=SLCC2372 na latest Complete Genome Major Full 2012-09-10 ASM21081v2 ERA-NET / Spatelis GCA_000210815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/815/GCF_000210815.2_ASM21081v2/ na na na haploid bacteria 3022910 3022910 38.000000 2 2 2 NCBI RefSeq GCF_000210815.2-RS_2025_07_23 2025-07-23 3068 2949 89 20824078;23339658 GCF_000210835.1 PRJNA224116 SAMEA3138381 na na 862962 817 Bacteroides fragilis 638R strain=638R na latest Complete Genome Major Full 2010-07-23 ASM21083v1 The Wellcome Trust Sanger Institute GCA_000210835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/835/GCF_000210835.1_ASM21083v1/ na na na haploid bacteria 5373121 5373121 43.500000 1 1 1 NCBI RefSeq GCF_000210835.1-RS_2025_12_24 2025-12-24 4414 4228 93 20829291 GCF_000210855.2 PRJNA224116 SAMEA3138382 na na 216597 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 strain=SL1344 na latest Complete Genome Major Full 2012-03-23 ASM21085v2 The Wellcome Trust Sanger Institute GCA_000210855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/855/GCF_000210855.2_ASM21085v2/ na na na haploid bacteria 5067450 5067450 52.000000 4 4 4 NCBI RefSeq GCF_000210855.2-RS_2025_03_16 2025-03-16 4991 4731 123 22538806 GCF_000210875.1 PRJNA224116 SAMEA3138383 na na 862964 727 Haemophilus influenzae 10810 strain=10810 na latest Complete Genome Major Full 2010-07-23 ASM21087v1 The Wellcome Trust Sanger Institute GCA_000210875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/875/GCF_000210875.1_ASM21087v1/ na na na haploid bacteria 1981535 1981535 38.000000 1 1 1 NCBI RefSeq GCF_000210875.1-RS_2026_02_10 2026-02-10 2008 1862 81 na GCF_000210895.1 PRJNA224116 SAMEA3138384 na na 862965 729 Haemophilus parainfluenzae T3T1 strain=T3T1 na latest Complete Genome Major Full 2010-07-23 ASM21089v1 The Wellcome Trust Sanger Institute GCA_000210895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/895/GCF_000210895.1_ASM21089v1/ na na na haploid bacteria 2086875 2086875 39.500000 1 1 1 NCBI RefSeq GCF_000210895.1-RS_2025_03_15 2025-03-15 2056 1953 80 na GCF_000210915.2 PRJNA224116 SAMEA3138385 na reference genome 862908 97084 Halobacteriovorax marinus SJ strain=SJ na latest Complete Genome Major Full 2012-11-02 ASM21091v2 Wellcome Trust Sanger Institute GCA_000210915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/915/GCF_000210915.2_ASM21091v2/ na assembly from type material na haploid bacteria 3437906 3437906 36.500000 2 2 2 NCBI RefSeq GCF_000210915.2-RS_2025_12_10 2025-12-10 3326 3268 46 22955231 GCF_000210935.1 PRJNA224116 SAMEA3138386 na na 869216 1313 Streptococcus pneumoniae INV200 strain=INV200 na latest Complete Genome Major Full 2010-07-29 ASM21093v1 The Wellcome Trust Sanger Institute GCA_000210935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/935/GCF_000210935.1_ASM21093v1/ na na na haploid bacteria 2093317 2093317 39.500000 1 1 1 NCBI RefSeq GCF_000210935.1-RS_2026_02_10 2026-02-10 2128 1887 73 na GCF_000210955.1 PRJNA224116 SAMEA3138387 na na 869215 1313 Streptococcus pneumoniae OXC141 strain=OXC141 na latest Complete Genome Major Full 2010-07-29 ASM21095v1 The Wellcome Trust Sanger Institute GCA_000210955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/955/GCF_000210955.1_ASM21095v1/ na na na haploid bacteria 2036867 2036867 40.000000 1 1 1 NCBI RefSeq GCF_000210955.1-RS_2026_04_17 2026-04-17 2134 1895 73 21034474;24130509 GCF_000210975.1 PRJNA224116 SAMEA3138388 na na 869269 1313 Streptococcus pneumoniae INV104 strain=INV104 na latest Complete Genome Major Full 2010-07-29 ASM21097v1 The Wellcome Trust Sanger Institute GCA_000210975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/975/GCF_000210975.1_ASM21097v1/ na na na haploid bacteria 2142122 2142122 39.500000 1 1 1 NCBI RefSeq GCF_000210975.1-RS_2026_02_10 2026-02-10 2219 1955 73 na GCF_000210995.1 PRJNA224116 SAMEA3138389 na na 869303 1313 Streptococcus pneumoniae SPN034156 strain=SNP034156 na latest Complete Genome Major Full 2010-07-29 ASM21099v1 Wellcome Trust Sanger Institute GCA_000210995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/210/995/GCF_000210995.1_ASM21099v1/ na na na haploid bacteria 2024476 2024476 40.000000 1 1 1 NCBI RefSeq GCF_000210995.1-RS_2026_04_19 2026-04-19 2097 1850 73 21034474;24130509 GCF_000211015.1 PRJNA224116 SAMEA3138390 na na 869304 1313 Streptococcus pneumoniae SPN034183 strain=SNP034183 na latest Complete Genome Major Full 2010-07-29 ASM21101v1 Wellcome Trust Sanger Institute GCA_000211015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/015/GCF_000211015.1_ASM21101v1/ na na na haploid bacteria 2037254 2037254 40.000000 1 1 1 NCBI RefSeq GCF_000211015.1-RS_2025_04_24 2025-04-24 2133 1876 73 21034474;24130509 GCF_000211035.1 PRJNA224116 SAMEA3138391 na na 869306 1313 Streptococcus pneumoniae SPN994038 strain=SNP994038 na latest Complete Genome Major Full 2012-12-10 ASM21103v2 Wellcome Trust Sanger Institute GCA_000211035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/035/GCF_000211035.1_ASM21103v2/ na na na haploid bacteria 2026239 2026239 40.000000 1 1 1 NCBI RefSeq GCF_000211035.1-RS_2026_02_24 2026-02-24 2128 1890 73 21034474;24130509 GCF_000211055.1 PRJNA224116 SAMEA3138392 na na 869307 1313 Streptococcus pneumoniae SPN994039 strain=SNP994039 na latest Complete Genome Major Full 2012-12-10 ASM21105v2 Wellcome Trust Sanger Institute GCA_000211055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/055/GCF_000211055.1_ASM21105v2/ na na na haploid bacteria 2026505 2026505 40.000000 1 1 1 NCBI RefSeq GCF_000211055.1-RS_2026_04_16 2026-04-16 2128 1892 73 21034474;24130509 GCF_000211075.1 PRJNA224116 SAMEA3138393 na na 869311 1313 Streptococcus pneumoniae SPN032672 strain=SPN032672 na latest Complete Genome Major Full 2010-07-29 ASM21107v1 Wellcome Trust Sanger Institute GCA_000211075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/075/GCF_000211075.1_ASM21107v1/ na na na haploid bacteria 2131190 2131190 39.500000 1 1 1 NCBI RefSeq GCF_000211075.1-RS_2026_02_10 2026-02-10 2222 1934 73 na GCF_000211115.1 PRJNA224116 SAMEA2272454 CAFM00000000.1 na 866628 446 Legionella pneumophila 130b strain=130b na latest Contig Major Full 2011-10-31 ASM21111v2 University of Queensland, Australia GCA_000211115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/115/GCF_000211115.1_ASM21111v2/ na na na haploid bacteria 3474000 3474000 38.000000 0 159 159 NCBI RefSeq GCF_000211115.1-RS_2026_03_21 2026-03-21 3216 3021 49 20833813 GCF_000211155.1 PRJNA224116 SAMEA2272574 na na 929557 83554 Chlamydia psittaci RD1 strain=RD1 na latest Chromosome Major Full 2010-12-09 ASM21115v1 Wellcome Trust Sanger insititute GCA_000211155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/155/GCF_000211155.1_ASM21115v1/ na na na haploid bacteria 1171629 1164756 39.000000 2 2 7 NCBI RefSeq GCF_000211155.1-RS_2026_03_27 2026-03-27 1032 969 41 21183672 GCF_000211215.1 PRJNA224116 SAMN00116865 AFEC00000000.1 na 904338 1292 Staphylococcus warneri VCU121 strain=VCU121 na latest Contig Major Full 2011-04-26 ASM21121v2 J. Craig Venter Institute GCA_000211215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/215/GCF_000211215.1_ASM21121v2/ na na na haploid bacteria 2459386 2459386 32.500000 0 183 183 NCBI RefSeq GCF_000211215.1-RS_2025_07_30 2025-07-30 2496 2300 68 na GCF_000211235.1 PRJNA224116 SAMEA3138395 na na 699034 1496 Clostridioides difficile BI1 strain=BI1 na latest Complete Genome Major Full 2010-03-24 ASM21123v1 Wellcome Trust Sanger Institute GCA_000211235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/235/GCF_000211235.1_ASM21123v1/ na na na haploid bacteria 4464700 4464700 28.500000 3 3 3 NCBI RefSeq GCF_000211235.1-RS_2026_03_04 2026-03-04 4123 3948 117 20368420 GCF_000211255.2 PRJNA224116 SAMN02603509 na na 936153 1351 Enterococcus faecalis 62 strain=62 na latest Complete Genome Major Full 2011-02-16 ASM21125v2 Laboratory of Microbial Gene Technology and Food Microbiology, Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences GCA_000211255.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/255/GCF_000211255.2_ASM21125v2/ na na na haploid bacteria 3100313 3100313 37.500000 4 4 4 NCBI RefSeq GCF_000211255.2-RS_2025_07_07 2025-07-07 3044 2862 70 19393078;21398545 GCF_000211295.1 PRJNA224116 SAMN02603925 na na 936139 2100 Mesomycoplasma hyorhinis MCLD strain=MCLD na latest Complete Genome Major Full 2011-04-27 ASM21129v1 The Hebrew University Hadassah Medical School GCA_000211295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/295/GCF_000211295.1_ASM21129v1/ na na na haploid bacteria 829709 829709 26.000000 1 1 1 NCBI RefSeq GCF_000211295.1-RS_2026_03_26 2026-03-26 763 691 36 21705582 GCF_000211375.1 PRJNA224116 SAMN00713605 na na 511437 1581 Lentilactobacillus buchneri NRRL B-30929 strain=NRRL B-30929 na latest Complete Genome Major Full 2011-04-18 ASM21137v1 US DOE Joint Genome Institute GCA_000211375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/375/GCF_000211375.1_ASM21137v1/ na na na haploid bacteria 2588309 2588309 44.000000 4 4 4 NCBI RefSeq GCF_000211375.1-RS_2025_09_10 2025-09-10 2547 2421 81 21622751 GCF_000211395.1 PRJNA224116 SAMN02470896 AFET00000000.1 na 1004153 562 Escherichia coli AA86 strain=AA86 na latest Scaffold Major Full 2011-04-28 ASM21139v1 Seoul National University GCA_000211395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/395/GCF_000211395.1_ASM21139v1/ na na na haploid bacteria 4983288 4983288 50.500000 2 5 5 NCBI RefSeq GCF_000211395.1-RS_2025_04_26 2025-04-26 4867 4611 91 21602332 GCF_000211415.1 PRJNA224116 SAMN02471025 AEXB00000000.1 na 980518 539813 Enterobacter mori LMG 25706 strain=LMG 25706 na latest Scaffold Major Full 2011-04-29 ASM21141v1 Institute of Biotechnology, Zhejiang University GCA_000211415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/415/GCF_000211415.1_ASM21141v1/ na assembly from type material na haploid bacteria 4960219 4953765 55.500000 0 23 139 NCBI RefSeq GCF_000211415.1-RS_2026_01_13 2026-01-13 4749 4530 79 21602328 GCF_000211475.1 PRJNA224116 SAMN02603477 na na 342949 342949 Pyrococcus sp. NA2 strain=NA2 na latest Complete Genome Major Full 2011-04-29 ASM21147v1 Korea Ocean Research and Development Institute GCA_000211475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/475/GCF_000211475.1_ASM21147v1/ na na na haploid archaea 1861320 1861320 42.500000 1 1 1 NCBI RefSeq GCF_000211475.1-RS_2024_10_21 2024-10-21 2061 1976 70 21602357 GCF_000211495.1 PRJNA224116 SAMD00036551 BACE00000000.1 na 1001530 553611 Photobacterium leiognathi subsp. mandapamensis svers.1.1. strain=svers.1.1. svers.1.1. latest Scaffold Major Full 2011-04-07 ASM21149v1 University of Miyazaki GCA_000211495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/495/GCF_000211495.1_ASM21149v1/ na na na haploid bacteria 4598918 4564780 41.000000 0 11 31 NCBI RefSeq GCF_000211495.1-RS_2026_03_03 2026-03-03 4086 3981 85 21478348 GCF_000211545.4 PRJNA224116 SAMN02641558 na na 1006581 2096 Mycoplasmoides gallisepticum S6 strain=S6 na latest Complete Genome Major Full 2016-02-25 ASM21154v6 Research Institute of Phisical-Chemical Medicine (Moscow) GCA_000211545.6 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/545/GCF_000211545.4_ASM21154v6/ na na na haploid bacteria 985433 985433 31.500000 1 1 1 NCBI RefSeq GCF_000211545.4-RS_2026_02_26 2026-02-26 822 746 42 21818284 GCF_000211795.1 PRJNA224116 SAMN02469909 AFGG00000000.1 na 1007104 1007104 Sphingomonas sp. S17 strain=S17 na latest Contig Major Full 2011-05-03 SphS17_1.0 INDEAR GCA_000211795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/795/GCF_000211795.1_SphS17_1.0/ na na na haploid bacteria 4268406 4268406 65.500000 0 62 62 NCBI RefSeq GCF_000211795.1-RS_2025_08_27 2025-08-27 4024 3908 55 21602338 GCF_000211815.1 PRJNA224116 SAMN02471690 AEPQ00000000.1 reference genome 489825 1155739 Moorena producens 3L strain=3L na latest Scaffold Major Full 2011-05-09 ASM21181v1 University of California, San Diego, Scripps Institution of Oceanography GCA_000211815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/815/GCF_000211815.1_ASM21181v1/ na assembly from type material na haploid bacteria 8478612 8389406 43.500000 0 161 288 NCBI RefSeq GCF_000211815.1-RS_2025_08_05 2025-08-05 7506 6969 71 21555588 GCF_000211835.1 PRJNA224116 SAMN02469410 AEGR00000000.1 reference genome 887062 80880 Hylemonella gracilis ATCC 19624 strain=ATCC 19624 na latest Contig Major Full 2011-05-03 ASM21183v1 California Institute of Technology GCA_000211835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/835/GCF_000211835.1_ASM21183v1/ na assembly from type material na haploid bacteria 3618708 3618708 65.000000 0 115 115 NCBI RefSeq GCF_000211835.1-RS_2025_11_26 2025-11-26 3391 3295 49 21673657 GCF_000211855.2 PRJNA224116 SAMN00713635 na na 983544 983544 Lacinutrix sp. 5H-3-7-4 strain=5H-3-7-4 na latest Complete Genome Major Full 2011-06-03 ASM21185v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000211855.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/855/GCF_000211855.2_ASM21185v3/ na na na haploid bacteria 3296168 3296168 31.000000 1 1 1 NCBI RefSeq GCF_000211855.2-RS_2024_08_22 2024-08-22 3013 2957 46 21725025 GCF_000211935.1 PRJNA224116 SAMN00792439 AFFZ00000000.1 na 766142 622 Shigella dysenteriae 155-74 strain=155-74 na latest Contig Major Full 2011-05-04 ASM21193v2 Institute for Genome Sciences GCA_000211935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/935/GCF_000211935.1_ASM21193v2/ na na na haploid bacteria 5162596 5162596 51.000000 0 113 113 NCBI RefSeq GCF_000211935.1-RS_2026_06_10 2026-06-10 5373 4246 142 na GCF_000211955.1 PRJNA224116 SAMN00792437 AFGC00000000.1 na 766139 621 Shigella boydii 3594-74 strain=3594-74 na latest Contig Major Full 2011-05-04 ASM21195v2 Institute for Genome Sciences GCA_000211955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/211/955/GCF_000211955.1_ASM21195v2/ na na na haploid bacteria 4662214 4662214 51.000000 0 106 106 NCBI RefSeq GCF_000211955.1-RS_2025_07_05 2025-07-05 4875 3838 149 na GCF_000212355.1 PRJNA224116 SAMN00713609 na na 983548 983548 Dokdonia sp. 4H-3-7-5 strain=4H-3-7-5 na latest Complete Genome Major Full 2011-05-05 ASM21235v1 US DOE Joint Genome Institute GCA_000212355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/355/GCF_000212355.1_ASM21235v1/ na na na haploid bacteria 3389993 3389993 37.500000 1 1 1 NCBI RefSeq GCF_000212355.1-RS_2025_01_08 2025-01-08 3031 2970 55 21725025 GCF_000212375.1 PRJNA224116 SAMN00713611 na reference genome 879243 28123 Porphyromonas asaccharolytica DSM 20707 strain=DSM 20707 na latest Complete Genome Major Full 2011-05-05 ASM21237v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000212375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/375/GCF_000212375.1_ASM21237v1/ na assembly from type material na haploid bacteria 2186370 2186370 52.500000 1 1 1 NCBI RefSeq GCF_000212375.1-RS_2026_05_01 2026-05-01 1715 1642 55 na GCF_000212395.1 PRJNA224116 SAMN00713612 na reference genome 747365 184064 Thermodesulfobium narugense DSM 14796 strain=DSM 14796 na latest Complete Genome Major Full 2011-05-05 ASM21239v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000212395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/395/GCF_000212395.1_ASM21239v1/ na assembly from type material na haploid bacteria 1898865 1898865 34.000000 1 1 1 NCBI RefSeq GCF_000212395.1-RS_2025_12_09 2025-12-09 1924 1850 57 na GCF_000212415.1 PRJNA224116 SAMN00713613 na reference genome 906968 81028 Treponema brennaborense DSM 12168 strain=DSM 12168 na latest Complete Genome Major Full 2011-05-05 ASM21241v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000212415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/415/GCF_000212415.1_ASM21241v1/ na assembly from type material na haploid bacteria 3055580 3055580 51.500000 1 1 1 NCBI RefSeq GCF_000212415.1-RS_2026_05_01 2026-05-01 2652 2586 62 na GCF_000212435.1 PRJNA224116 SAMN02469730 AFGU00000000.1 na 561307 1280 Staphylococcus aureus subsp. aureus RN4220 strain=RN4220 na latest Contig Major Full 2011-05-05 ASM21243v2 Dartmouth Medical School GCA_000212435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/435/GCF_000212435.1_ASM21243v2/ na na na haploid bacteria 2663395 2663395 32.500000 0 118 118 NCBI RefSeq GCF_000212435.1-RS_2025_04_26 2025-04-26 2664 2535 57 21378186 GCF_000212455.1 PRJNA224116 SAMN02415240 AFGI00000000.1 na 1027396 1639 Listeria monocytogenes str. Scott A strain=Scott A na latest Chromosome Major Full 2011-05-06 ASM21245v1 Institute of Food, Nutrition and Health, ETH Zurich GCA_000212455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/455/GCF_000212455.1_ASM21245v1/ na na na haploid bacteria 3021822 3021322 38.000000 1 1 5 NCBI RefSeq GCF_000212455.1-RS_2025_04_15 2025-04-15 3054 2925 89 21685277 GCF_000212475.1 PRJNA224116 SAMN02471926 AFHF00000000.1 na 1017266 1363 Lactococcus garvieae UNIUD074 strain=UNIUD074 na latest Contig Major Full 2011-05-05 LacGar1.0 UNIVERSITY OF OVIEDO GCA_000212475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/475/GCF_000212475.1_LacGar1.0/ na na na haploid bacteria 2171472 2171472 38.500000 0 25 25 NCBI RefSeq GCF_000212475.1-RS_2026_02_06 2026-02-06 2220 2062 100 21602331 GCF_000212605.1 PRJNA224116 SAMN02471741 AFER00000000.1 na 992186 1063 Cereibacter sphaeroides WS8N strain=WS8N na latest Chromosome Major Full 2011-05-10 ASM21260v1 University of Oxford GCA_000212605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/605/GCF_000212605.1_ASM21260v1/ na na na haploid bacteria 4417788 4417588 69.000000 4 4 4 NCBI RefSeq GCF_000212605.1-RS_2026_03_24 2026-03-24 4273 4167 64 21622735 GCF_000212635.3 PRJNA224116 SAMEA3138396 CAHW00000000.2 na 564065 305 Ralstonia solanacearum MolK2 strain=MolK2 na latest Contig Major Full 2014-08-28 ASM21263v2 Genoscope GCA_000212635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/635/GCF_000212635.3_ASM21263v2/ na na na haploid bacteria 5551882 5551882 66.500000 0 349 349 NCBI RefSeq GCF_000212635.3-RS_2025_09_15 2025-09-15 5231 4829 41 na GCF_000212675.2 PRJNA224116 SAMN00713616 na reference genome 690850 873 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay strain=Walvis Bay na latest Complete Genome Major Full 2012-01-04 ASM21267v2 US DOE Joint Genome Institute GCA_000212675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/675/GCF_000212675.2_ASM21267v2/ na na na haploid bacteria 4200534 4200534 61.500000 1 1 1 NCBI RefSeq GCF_000212675.2-RS_2026_03_30 2026-03-30 3872 3759 71 21642452;31068923 GCF_000212695.1 PRJNA224116 SAMN00713615 na reference genome 590998 1708 Cellulomonas fimi ATCC 484 strain=ATCC 484 na latest Complete Genome Major Full 2011-05-09 ASM21269v1 US DOE Joint Genome Institute GCA_000212695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/695/GCF_000212695.1_ASM21269v1/ na assembly from type material na haploid bacteria 4266344 4266344 74.500000 1 1 1 NCBI RefSeq GCF_000212695.1-RS_2026_04_26 2026-04-26 3871 3792 55 na GCF_000212715.2 PRJNA224116 SAMN02604221 na na 696406 562 Escherichia coli UMNK88 strain=UMNK88 na latest Complete Genome Major Full 2011-05-09 ASM21271v2 University of Minnesota GCA_000212715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/715/GCF_000212715.2_ASM21271v2/ na na na haploid bacteria 5666764 5666764 51.000000 6 6 6 NCBI RefSeq GCF_000212715.2-RS_2025_05_23 2025-05-23 5791 5337 129 21858108;22081385 GCF_000212735.1 PRJNA224116 SAMN00713614 na reference genome 760192 2350 Haliscomenobacter hydrossis DSM 1100 strain=DSM 1100 na latest Complete Genome Major Full 2011-05-09 ASM21273v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000212735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/735/GCF_000212735.1_ASM21273v1/ na assembly from type material na haploid bacteria 8771651 8771651 47.000000 4 4 4 NCBI RefSeq GCF_000212735.1-RS_2026_03_12 2026-03-12 6849 6752 59 21886862 GCF_000212775.1 PRJNA224116 SAMN02469643 AFHL00000000.1 na 1009854 347 Xanthomonas oryzae X8-1A strain=X8-1A na latest Contig Major Full 2011-05-09 ASM21277v2 Colorado State University GCA_000212775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/775/GCF_000212775.1_ASM21277v2/ na na na haploid bacteria 4594862 4594862 64.000000 0 875 875 NCBI RefSeq GCF_000212775.1-RS_2026_05_18 2026-05-18 4527 3776 166 21515727 GCF_000212795.1 PRJNA224116 SAMN00253969 AFFM00000000.1 na 888823 1305 Streptococcus sanguinis SK1059 strain=CCUG 59332 na latest Scaffold Major Full 2011-05-11 ASM21279v1 Baylor College of Medicine GCA_000212795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/795/GCF_000212795.1_ASM21279v1/ na na na haploid bacteria 2428274 2426375 43.000000 0 9 32 NCBI RefSeq GCF_000212795.1-RS_2026_01_27 2026-01-27 2386 2265 41 na GCF_000212815.1 PRJNA224116 SAMN00253323 AFFO00000000.1 na 888808 1305 Streptococcus sanguinis SK49 strain=CCUG 59319 na latest Scaffold Major Full 2011-05-11 ASM21281v1 Baylor College of Medicine GCA_000212815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/815/GCF_000212815.1_ASM21281v1/ na na na haploid bacteria 2279404 2260082 43.000000 0 5 21 NCBI RefSeq GCF_000212815.1-RS_2026_01_27 2026-01-27 2270 2162 53 na GCF_000212835.1 PRJNA224116 SAMN00253325 AFFL00000000.1 na 888820 1305 Streptococcus sanguinis SK1056 strain=CCUG 59329 na latest Scaffold Major Full 2011-05-11 ASM21283v1 Baylor College of Medicine GCA_000212835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/835/GCF_000212835.1_ASM21283v1/ na na na haploid bacteria 2376689 2363727 43.000000 0 3 11 NCBI RefSeq GCF_000212835.1-RS_2026_01_27 2026-01-27 2338 2217 41 na GCF_000212855.1 PRJNA224116 SAMN00253324 AFFN00000000.1 na 888816 1305 Streptococcus sanguinis SK355 strain=CCUG 59325 na latest Scaffold Major Full 2011-05-11 ASM21285v1 Baylor College of Medicine GCA_000212855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/855/GCF_000212855.1_ASM21285v1/ na na na haploid bacteria 2370432 2351951 43.500000 0 6 34 NCBI RefSeq GCF_000212855.1-RS_2025_03_11 2025-03-11 2313 2201 53 na GCF_000212975.1 PRJNA224116 SAMN02603647 na na 1017264 520 Bordetella pertussis CS strain=CS na latest Complete Genome Major Full 2011-05-10 ASM21297v1 National Institute for the Control of Pharmaceutical and Biological Products GCA_000212975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/212/975/GCF_000212975.1_ASM21297v1/ na na na haploid bacteria 4124236 4124236 67.500000 1 1 1 NCBI RefSeq GCF_000212975.1-RS_2026_02_06 2026-02-06 3958 3603 64 21622744 GCF_000213055.1 PRJNA224116 SAMN02470040 AFHJ00000000.1 na 355249 355249 Streptomyces sp. Tu6071 strain=Tu6071 na latest Chromosome Major Full 2011-05-12 ASM21305v1 Pharmaceutical Bioinformatic, University of Freiburg GCA_000213055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/055/GCF_000213055.1_ASM21305v1/ na na na haploid bacteria 7506727 7506627 73.000000 2 2 3 NCBI RefSeq GCF_000213055.1-RS_2025_03_25 2025-03-25 6527 6314 93 21705604 GCF_000213135.1 PRJNA224116 SAMN00189522 na na 585538 210 Helicobacter pylori 83 strain=83 na latest Complete Genome Major Full 2011-05-11 ASM21313v1 Baylor College of Medicine GCA_000213135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/135/GCF_000213135.1_ASM21313v1/ na na na haploid bacteria 1617426 1617426 38.500000 1 1 1 NCBI RefSeq GCF_000213135.1-RS_2026_01_10 2026-01-10 1570 1410 45 na GCF_000213155.1 PRJNA224116 SAMN02603263 na na 909952 1747 Cutibacterium acnes 266 strain=266 na latest Complete Genome Major Full 2011-05-11 ASM21315v1 Georg-August-University Goettingen GCA_000213155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/155/GCF_000213155.1_ASM21315v1/ na na na haploid bacteria 2494578 2494578 60.000000 1 1 1 NCBI RefSeq GCF_000213155.1-RS_2026_04_02 2026-04-02 2445 2315 58 21738717 GCF_000213175.1 PRJNA264105 SAMN02769628 AFBT00000000.1 reference genome 510951 40127 Neurospora tetrasperma FGSC 2508 strain=FGSC 2508 na latest Scaffold Major Full 2011-06-21 v2.0 US DOE Joint Genome Institute (JGI-PGF) GCA_000213175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/175/GCF_000213175.1_v2.0/ na na na haploid fungi 39146333 38490894 49.500000 0 81 551 US DOE Joint Genome Institute (JGI-PGF) Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) 2023-12-29 10379 10379 0 21750257 GCF_000213215.1 PRJNA224116 SAMN02602984 na reference genome 933801 563177 Acidianus hospitalis W1 strain=W1 na latest Complete Genome Major Full 2011-05-12 ASM21321v1 Archaea Centre, Department of Biology, University of Copenhagen, Copenhagen 2200 N, Denmark GCA_000213215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/215/GCF_000213215.1_ASM21321v1/ na na na haploid archaea 2137654 2137654 34.000000 1 1 1 NCBI RefSeq GCF_000213215.1-RS_2026_05_01 2026-05-01 2534 2415 51 21607549 GCF_000213235.1 PRJNA224116 SAMN00713617 na reference genome 1209989 499229 Tepidanaerobacter acetatoxydans Re1 strain=Re1 na latest Complete Genome Major Full 2011-05-12 ASM21323v1 US DOE Joint Genome Institute GCA_000213235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/235/GCF_000213235.1_ASM21323v1/ na assembly from type material na haploid bacteria 2759867 2759867 37.500000 1 1 1 NCBI RefSeq GCF_000213235.1-RS_2026_04_26 2026-04-26 2687 2576 62 na GCF_000213255.1 PRJNA224116 SAMN02232034 na reference genome 697281 252966 Mahella australiensis 50-1 BON strain=50-1 BON na latest Complete Genome Major Full 2011-05-12 ASM21325v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000213255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/255/GCF_000213255.1_ASM21325v1/ na assembly from type material na haploid bacteria 3135972 3135972 43.500000 1 1 1 NCBI RefSeq GCF_000213255.1-RS_2026_05_01 2026-05-01 3003 2908 62 21886860 GCF_000213295.2 PRJNA224116 SAMN00189097 AFHP00000000.2 na 706436 706435 Capnocytophaga sp. oral taxon 329 str. F0087 strain=F0087 na latest Scaffold Major Full 2014-11-25 ASM21329v2 Washington University Genome Center GCA_000213295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/295/GCF_000213295.2_ASM21329v2/ na na na haploid bacteria 2536778 2456193 40.000000 0 141 287 NCBI RefSeq GCF_000213295.2-RS_2024_08_12 2024-08-12 2384 2256 38 na GCF_000213315.1 PRJNA224116 SAMN02470015 AFHW00000000.1 na 1007103 189691 Paenibacillus elgii B69 strain=B69 na latest Contig Major Full 2011-05-12 ASM21331v1 Zhejiang University GCA_000213315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/315/GCF_000213315.1_ASM21331v1/ na na na haploid bacteria 7962070 7962070 52.500000 0 278 278 NCBI RefSeq GCF_000213315.1-RS_2026_03_20 2026-03-20 7696 7418 56 21705583 GCF_000213495.1 PRJNA224116 SAMN00792448 AFHD00000000.1 na 766159 623 Shigella flexneri 2930-71 strain=2930-71 na latest Contig Major Full 2011-05-12 ASM21349v2 Institute for Genome Sciences GCA_000213495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/495/GCF_000213495.1_ASM21349v2/ na na na haploid bacteria 4644642 4644642 51.000000 0 50 50 NCBI RefSeq GCF_000213495.1-RS_2025_07_19 2025-07-19 4717 3772 160 na GCF_000213535.1 PRJNA224116 SAMN00259690 AFHS00000000.1 na 887327 504 Kingella kingae ATCC 23330 strain=ATCC 23330 na latest Scaffold Major Full 2011-05-13 ASM21353v1 Baylor College of Medicine GCA_000213535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/535/GCF_000213535.1_ASM21353v1/ na assembly from type material na haploid bacteria 1975353 1916619 47.000000 0 20 85 NCBI RefSeq GCF_000213535.1-RS_2026_03_31 2026-03-31 2003 1887 55 na GCF_000213555.1 PRJNA224116 SAMN02463862 ADLV00000000.1 reference genome 742766 156974 Dysgonomonas gadei ATCC BAA-286 strain=ATCC BAA-286 na latest Scaffold Major Full 2011-05-18 Dysg_gade_ATCC_V1 Broad Institute GCA_000213555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/555/GCF_000213555.1_Dysg_gade_ATCC_V1/ na assembly from type material na haploid bacteria 5176087 5165995 39.500000 0 25 65 NCBI RefSeq GCF_000213555.1-RS_2026_05_01 2026-05-01 4145 4042 53 na GCF_000213575.1 PRJNA224116 SAMN02463863 ADLW00000000.1 reference genome 742767 163665 Dysgonomonas mossii DSM 22836 strain=DSM 22836 na latest Scaffold Major Full 2011-05-18 Dysg_moss_DSM_V1 Broad Institute GCA_000213575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/575/GCF_000213575.1_Dysg_moss_DSM_V1/ na assembly from type material na haploid bacteria 3954365 3951265 37.500000 0 28 39 NCBI RefSeq GCF_000213575.1-RS_2026_03_31 2026-03-31 3430 3334 63 na GCF_000213635.1 PRJNA224116 SAMN02602986 na na 990282 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 strain=UK-1 na latest Complete Genome Major Full 2011-05-13 ASM21363v1 Arizona State University GCA_000213635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/635/GCF_000213635.1_ASM21363v1/ na na na haploid bacteria 4911145 4911145 52.000000 2 2 2 NCBI RefSeq GCF_000213635.1-RS_2025_04_15 2025-04-15 4799 4547 123 21622747 GCF_000213655.1 PRJNA224116 SAMN02603134 na reference genome 715451 715451 Alteromonas naphthalenivorans strain=SN2 na latest Complete Genome Major Full 2011-05-13 ASM21365v1 Chung-ang University GCA_000213655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/655/GCF_000213655.1_ASM21365v1/ na assembly from type material na haploid bacteria 4972148 4972148 43.500000 1 1 1 NCBI RefSeq GCF_000213655.1-RS_2026_03_03 2026-03-03 4382 4229 83 21705606 GCF_000213695.1 PRJNA224116 SAMN00792440 AFGW00000000.1 na 766145 623 Shigella flexneri VA-6 strain=VA-6 na latest Contig Major Full 2011-05-13 ASM21369v2 Institute for Genome Sciences GCA_000213695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/695/GCF_000213695.1_ASM21369v2/ na na na haploid bacteria 4679117 4679117 51.000000 0 70 70 NCBI RefSeq GCF_000213695.1-RS_2025_07_18 2025-07-18 4874 3919 152 na GCF_000213785.1 PRJNA224116 SAMN02769644 na na 547143 547143 Hydrogenobaculum sp. 3684 strain=3684 na latest Complete Genome Major Full 2011-05-17 ASM21378v1 US DOE Joint Genome Institute GCA_000213785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/785/GCF_000213785.1_ASM21378v1/ na na na haploid bacteria 1552775 1552775 35.000000 1 1 1 NCBI RefSeq GCF_000213785.1-RS_2024_05_05 2024-05-05 1670 1605 54 23435891 GCF_000213805.1 PRJNA224116 SAMN00713619 na na 743720 47880 Pseudomonas fulva 12-X strain=12-X na latest Complete Genome Major Full 2011-05-17 ASM21380v1 US DOE Joint Genome Institute GCA_000213805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/805/GCF_000213805.1_ASM21380v1/ na na na haploid bacteria 4920769 4920769 63.500000 1 1 1 NCBI RefSeq GCF_000213805.1-RS_2025_08_25 2025-08-25 4590 4448 80 na GCF_000213865.1 PRJNA224116 SAMN00100758 na na 866777 1685 Bifidobacterium breve ACS-071-V-Sch8b strain=ACS-071-V-Sch8b na latest Complete Genome Major Full 2011-05-17 ASM21386v1 J. Craig Venter Institute GCA_000213865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/865/GCF_000213865.1_ASM21386v1/ na na na haploid bacteria 2327492 2327492 58.500000 1 1 1 NCBI RefSeq GCF_000213865.1-RS_2026_01_30 2026-01-30 2008 1851 65 na GCF_000213905.2 PRJNA224116 SAMN02470555 na na 1003238 83555 Chlamydia abortus LLG strain=LLG na latest Chromosome Major Full 2017-03-10 ASM21390v2 Moredun Research Institute GCA_000213905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/905/GCF_000213905.2_ASM21390v2/ na na na haploid bacteria 1143694 1135516 40.000000 1 1 3 NCBI RefSeq GCF_000213905.2-RS_2025_03_05 2025-03-05 1020 953 44 na GCF_000213935.1 PRJNA224116 SAMN02470217 AFIZ00000000.1 na 863239 1032851 Corynebacterium nuruki S6-4 strain=S6-4 na latest Contig Major Full 2011-05-17 ASM21393v1 Kyung Hee Univ. GCA_000213935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/935/GCF_000213935.1_ASM21393v1/ na assembly from type material na haploid bacteria 3106595 3106595 69.500000 0 68 68 NCBI RefSeq GCF_000213935.1-RS_2026_03_27 2026-03-27 2858 2766 63 21685278 GCF_000213955.1 PRJNA224116 SAMN00100736 na na 1009464 2702 Gardnerella vaginalis HMP9231 strain=HMP9231 na latest Complete Genome Major Full 2011-05-18 ASM21395v1 J. Craig Venter Institute GCA_000213955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/955/GCF_000213955.1_ASM21395v1/ na na na haploid bacteria 1726519 1726519 41.000000 1 1 1 NCBI RefSeq GCF_000213955.1-RS_2026_01_30 2026-01-30 1381 1311 54 na GCF_000213975.1 PRJNA224116 SAMN00259653 AFHQ00000000.1 reference genome 888060 82203 Centipeda periodontii DSM 2778 strain=DSM 2778 na latest Scaffold Major Full 2011-05-20 ASM21397v1 Baylor College of Medicine GCA_000213975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/975/GCF_000213975.1_ASM21397v1/ na assembly from type material na haploid bacteria 2761262 2715687 56.000000 0 10 71 NCBI RefSeq GCF_000213975.1-RS_2026_05_01 2026-05-01 2615 2499 65 na GCF_000213995.1 PRJNA224116 SAMN00259689 AFHR00000000.1 na 888063 158836 Enterobacter hormaechei ATCC 49162 strain=ATCC 49162 na latest Scaffold Major Full 2011-05-20 ASM21399v1 Baylor College of Medicine GCA_000213995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/213/995/GCF_000213995.1_ASM21399v1/ na assembly from type material na haploid bacteria 4860996 4806970 55.000000 0 14 84 NCBI RefSeq GCF_000213995.1-RS_2026_04_18 2026-04-18 4683 4546 82 na GCF_000214035.2 PRJNA224116 SAMN02471991 AFHG00000000.1 na 1000565 378211 Methyloversatilis universalis FAM5 strain=FAM5 na latest Contig Minor Full 2011-05-19 ASM21403v3 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000214035.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/035/GCF_000214035.2_ASM21403v3/ na assembly from type material na haploid bacteria 4232712 4232712 67.000000 0 58 58 NCBI RefSeq GCF_000214035.2-RS_2026_04_06 2026-04-06 3992 3903 60 21725020 GCF_000214095.2 PRJNA224116 SAMN00713557 na na 743299 160808 Acidithiobacillus ferrivorans SS3 strain=SS3 na latest Complete Genome Major Full 2011-08-17 ASM21409v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000214095.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/095/GCF_000214095.2_ASM21409v3/ na na na haploid bacteria 3207552 3207552 56.500000 1 1 1 NCBI RefSeq GCF_000214095.2-RS_2026_03_20 2026-03-20 3228 3117 57 21705598 GCF_000214115.1 PRJNA224116 SAMN02470195 AFID00000000.1 na 1029824 72000 Kocuria rhizophila P7-4 strain=P7-4 na latest Contig Major Full 2011-05-19 ASM21411v2 Genome Resource Center GCA_000214115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/115/GCF_000214115.1_ASM21411v2/ na na na haploid bacteria 2820331 2820331 70.500000 0 54 54 NCBI RefSeq GCF_000214115.1-RS_2025_08_03 2025-08-03 2511 2433 54 21685281 GCF_000214135.1 PRJNA224116 SAMN02470194 AFIE00000000.1 na 1029823 1029823 Acinetobacter sp. P8-3-8 strain=P8-3-8 na latest Contig Major Full 2011-05-19 ASM21413v1 Genome Resource Center GCA_000214135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/135/GCF_000214135.1_ASM21413v1/ na na na haploid bacteria 3892325 3892325 37.500000 0 204 204 NCBI RefSeq GCF_000214135.1-RS_2024_08_04 2024-08-04 3766 3582 71 21685286 GCF_000214155.1 PRJNA224116 SAMN02603865 na reference genome 875328 875328 Mycolicibacter sinensis strain=JDM601 na latest Complete Genome Major Full 2011-05-20 ASM21415v1 Shanghai Jiao Tong University School of Medicine GCA_000214155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/155/GCF_000214155.1_ASM21415v1/ na assembly from type material na haploid bacteria 4643668 4643668 68.500000 1 1 1 NCBI RefSeq GCF_000214155.1-RS_2026_03_30 2026-03-30 4434 4314 56 21685274 GCF_000214175.1 PRJNA224116 SAMN02603151 na reference genome 443218 639313 Hoyosella subflava DQS3-9A1 strain=DQS3-9A1 na latest Complete Genome Major Full 2011-05-20 ASM21417v1 College of Engineering, Peking University GCA_000214175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/175/GCF_000214175.1_ASM21417v1/ na assembly from type material na haploid bacteria 4863490 4863490 62.000000 3 3 3 NCBI RefSeq GCF_000214175.1-RS_2025_12_09 2025-12-09 4599 4484 57 21725023 GCF_000214195.1 PRJNA224116 SAMN00713623 na na 768490 768490 Serratia sp. AS12 strain=AS12 na latest Complete Genome Major Full 2011-05-20 ASM21419v1 US DOE Joint Genome Institute GCA_000214195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/195/GCF_000214195.1_ASM21419v1/ na na na haploid bacteria 5443009 5443009 56.000000 1 1 1 NCBI RefSeq GCF_000214195.1-RS_2024_08_21 2024-08-21 5119 4954 120 22768360 GCF_000214215.1 PRJNA224116 SAMN00713622 na reference genome 491952 936476 Marinomonas posidonica IVIA-Po-181 strain=IVIA-Po-181 na latest Complete Genome Major Full 2011-05-20 ASM21421v1 US DOE Joint Genome Institute GCA_000214215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/215/GCF_000214215.1_ASM21421v1/ na assembly from type material na haploid bacteria 3899940 3899940 44.500000 1 1 1 NCBI RefSeq GCF_000214215.1-RS_2026_05_01 2026-05-01 3623 3502 108 23458837 GCF_000214235.1 PRJNA224116 SAMN00713621 na reference genome 768492 82996 Serratia plymuthica AS9 strain=AS9 na latest Complete Genome Major Full 2011-05-20 ASM21423v1 US DOE Joint Genome Institute GCA_000214235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/235/GCF_000214235.1_ASM21423v1/ na na na haploid bacteria 5442880 5442880 56.000000 1 1 1 NCBI RefSeq GCF_000214235.1-RS_2026_03_30 2026-03-30 5122 4956 119 21886857;22675598 GCF_000214275.2 PRJNA224116 SAMN02256390 AFJF00000000.2 reference genome 686340 39775 Methylomicrobium album BG8 strain=BG8 na latest Chromosome Major Full 2012-03-23 ASM21427v3 US DOE Joint Genome Institute (JGI-PGF) GCA_000214275.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/275/GCF_000214275.2_ASM21427v3/ na assembly from type material na haploid bacteria 4493444 4493344 56.500000 2 2 3 NCBI RefSeq GCF_000214275.2-RS_2026_05_01 2026-05-01 4045 3938 52 23580712 GCF_000214295.1 PRJNA224116 SAMN00195299 AFDH00000000.1 na 944559 944559 Paenibacillus sp. HGF7 strain=HGF7 na latest Contig Major Full 2011-05-20 ASM21429v1 J. Craig Venter Institute GCA_000214295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/295/GCF_000214295.1_ASM21429v1/ na na na haploid bacteria 6282980 6282980 53.000000 0 148 148 NCBI RefSeq GCF_000214295.1-RS_2024_06_10 2024-06-10 5891 5680 81 na GCF_000214315.1 PRJNA224116 SAMN00138210 AFDI00000000.1 na 879307 2702 Gardnerella vaginalis 315-A strain=315-A na latest Contig Major Full 2011-05-20 ASM21431v2 J. Craig Venter Institute GCA_000214315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/315/GCF_000214315.1_ASM21431v2/ na na na haploid bacteria 1653275 1653275 41.500000 0 13 13 NCBI RefSeq GCF_000214315.1-RS_2025_07_30 2025-07-30 1335 1262 51 na GCF_000214335.1 PRJNA224116 SAMN02470047 AFMP00000000.1 na 1030157 1030157 Sphingomonas sp. KC8 strain=KC8 na latest Contig Major Full 2011-05-20 ASM21433v1 Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences GCA_000214335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/335/GCF_000214335.1_ASM21433v1/ na na na haploid bacteria 4074265 4074265 63.500000 0 70 70 NCBI RefSeq GCF_000214335.1-RS_2024_09_18 2024-09-18 3949 3850 52 21685282 GCF_000214355.1 PRJNA224116 SAMN02603453 na reference genome 545695 150829 Leadbettera azotonutricia ZAS-9 strain=ZAS-9 na latest Complete Genome Major Full 2011-05-23 ASM21435v1 J. Craig Venter Institute GCA_000214355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/355/GCF_000214355.1_ASM21435v1/ na assembly from type material na haploid bacteria 3855671 3855671 50.000000 1 1 1 NCBI RefSeq GCF_000214355.1-RS_2026_05_01 2026-05-01 3467 3386 56 21326336 GCF_000214375.1 PRJNA224116 SAMN02603452 na reference genome 545694 88058 Treponema primitia ZAS-2 strain=ZAS-2 na latest Complete Genome Major Full 2011-05-23 ASM21437v1 J. Craig Venter Institute GCA_000214375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/375/GCF_000214375.1_ASM21437v1/ na assembly from type material na haploid bacteria 4059867 4059867 51.000000 1 1 1 NCBI RefSeq GCF_000214375.1-RS_2026_05_01 2026-05-01 3569 3490 60 21326336 GCF_000214395.1 PRJNA224116 SAMN00713625 na na 742013 742013 Delftia sp. Cs1-4 strain=Cs1-4 na latest Complete Genome Major Full 2011-05-23 ASM21439v1 US DOE Joint Genome Institute GCA_000214395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/395/GCF_000214395.1_ASM21439v1/ na na na haploid bacteria 6685842 6685842 66.500000 1 1 1 NCBI RefSeq GCF_000214395.1-RS_2024_05_08 2024-05-08 6057 5929 99 22016746 GCF_000214415.1 PRJNA224116 SAMN00713627 na reference genome 880724 2189 Methanotorris igneus Kol 5 strain=Kol 5 na latest Complete Genome Major Full 2011-05-23 ASM21441v1 US DOE Joint Genome Institute GCA_000214415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/415/GCF_000214415.1_ASM21441v1/ na assembly from type material na haploid archaea 1854197 1854197 32.500000 1 1 1 NCBI RefSeq GCF_000214415.1-RS_2025_11_20 2025-11-20 1856 1795 43 na GCF_000214435.1 PRJNA224116 SAMN00713626 na reference genome 868595 1565 Desulfotomaculum nigrificans CO-1-SRB strain=CO-1-SRB na latest Complete Genome Major Full 2011-05-23 ASM21443v1 US DOE Joint Genome Institute GCA_000214435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/435/GCF_000214435.1_ASM21443v1/ na assembly from heterotypic synonym type material na haploid bacteria 2892255 2892255 46.500000 1 1 1 NCBI RefSeq GCF_000214435.1-RS_2026_05_13 2026-05-13 2883 2735 95 na GCF_000214455.1 PRJNA224116 SAMN00115116 AFIH00000000.1 na 904296 712414 Oribacterium sp. oral taxon 108 str. F0425 strain=F0425 na latest Contig Major Full 2011-05-23 ASM21445v1 J. Craig Venter Institute GCA_000214455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/455/GCF_000214455.1_ASM21445v1/ na na na haploid bacteria 2518361 2518361 43.500000 0 1 1 NCBI RefSeq GCF_000214455.1-RS_2025_08_25 2025-08-25 2325 2176 61 na GCF_000214495.1 PRJNA224116 SAMN00255229 AFIJ00000000.1 reference genome 1000568 1000568 Megasphaera lornae strain=UPII 199-6 na latest Contig Major Full 2011-05-23 ASM21449v1 J. Craig Venter Institute GCA_000214495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/495/GCF_000214495.1_ASM21449v1/ na assembly from type material na haploid bacteria 1640787 1640787 46.500000 0 45 45 NCBI RefSeq GCF_000214495.1-RS_2025_12_10 2025-12-10 1559 1468 56 na GCF_000214555.1 PRJNA224116 SAMN00621698 AFIM00000000.1 na 1000570 1328 Streptococcus anginosus SK52 = DSM 20563 strain=SK52 na latest Contig Major Full 2011-05-23 ASM21455v1 J. Craig Venter Institute GCA_000214555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/555/GCF_000214555.1_ASM21455v1/ na assembly from type material na haploid bacteria 1892386 1892386 38.500000 0 109 109 NCBI RefSeq GCF_000214555.1-RS_2025_07_30 2025-07-30 1890 1710 37 na GCF_000214595.1 PRJNA224116 SAMN02469574 AFIG00000000.1 na 1026882 40223 Methylophaga thalassica MP strain=MP na latest Contig Major Full 2011-05-23 ASM21459v1 Chosun University GCA_000214595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/595/GCF_000214595.1_ASM21459v1/ na assembly from heterotypic synonym type material na haploid bacteria 3261960 3261960 43.500000 0 3 3 NCBI RefSeq GCF_000214595.1-RS_2025_11_26 2025-11-26 3149 3086 48 21685284 GCF_000214615.1 PRJNA224116 SAMN02469831 AECL00000000.1 na 82789 82789 Agrobacterium sp. ATCC 31749 strain=ATCC 31749 na latest Contig Major Full 2011-05-23 Agro31749_1.0 Georgia Institute of Technology GCA_000214615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/615/GCF_000214615.1_Agro31749_1.0/ na na na haploid bacteria 5461917 5461917 59.000000 0 95 95 NCBI RefSeq GCF_000214615.1-RS_2024_06_01 2024-06-01 5200 5050 52 21685288 GCF_000214665.1 PRJNA224116 SAMN00713628 na na 857087 421 Methylomonas methanica MC09 strain=MC09 na latest Complete Genome Major Full 2011-05-24 ASM21466v1 US DOE Joint Genome Institute GCA_000214665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/665/GCF_000214665.1_ASM21466v1/ na na na haploid bacteria 5051681 5051681 51.500000 1 1 1 NCBI RefSeq GCF_000214665.1-RS_2025_04_26 2025-04-26 4630 4525 58 22123758 GCF_000214705.1 PRJNA224116 SAMN00713629 na reference genome 760568 58135 Desulfofundulus kuznetsovii DSM 6115 strain=DSM 6115 na latest Complete Genome Major Full 2011-05-24 ASM21470v1 US DOE Joint Genome Institute GCA_000214705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/705/GCF_000214705.1_ASM21470v1/ na assembly from type material na haploid bacteria 3601386 3601386 55.000000 1 1 1 NCBI RefSeq GCF_000214705.1-RS_2025_07_05 2025-07-05 3624 3493 60 na GCF_000214725.1 PRJNA224116 SAMN00713630 na reference genome 868131 868131 Methanobacterium paludis strain=SWAN1 na latest Complete Genome Major Full 2011-05-24 ASM21472v1 US DOE Joint Genome Institute GCA_000214725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/725/GCF_000214725.1_ASM21472v1/ na assembly from type material na haploid archaea 2546541 2546541 35.500000 1 1 1 NCBI RefSeq GCF_000214725.1-RS_2025_11_21 2025-11-21 2497 2432 58 24449792 GCF_000214765.2 PRJNA224116 SAMN02603711 MIPU00000000.1 na 1033813 562 Escherichia coli NA114 strain=NA114 na latest Contig Major Full 2016-11-28 ASM21476v3 Pathogen Biology Laboratory, Department of Biotechnology, University of Hyderabad GCA_000214765.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/765/GCF_000214765.2_ASM21476v3/ na na na haploid bacteria 5246175 5246175 51.000000 0 105 105 NCBI RefSeq GCF_000214765.2-RS_2025_06_20 2025-06-20 5317 4931 104 21685291 GCF_000214785.1 PRJNA224116 SAMN02603965 na na 190905 267818 Lactobacillus kefiranofaciens subsp. kefiranofaciens strain=ZW3 na latest Complete Genome Major Full 2011-05-25 ASM21478v1 TianJin university of science and technology GCA_000214785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/785/GCF_000214785.1_ASM21478v1/ na na na haploid bacteria 2354088 2354088 37.500000 3 3 3 NCBI RefSeq GCF_000214785.1-RS_2026_05_13 2026-05-13 2360 2064 75 21705607 GCF_000214805.1 PRJNA224116 SAMN00713631 na na 768493 768493 Serratia sp. AS13 strain=AS13 na latest Complete Genome Major Full 2011-05-25 ASM21480v1 US DOE Joint Genome Institute GCA_000214805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/805/GCF_000214805.1_ASM21480v1/ na na na haploid bacteria 5442549 5442549 56.000000 1 1 1 NCBI RefSeq GCF_000214805.1-RS_2024_08_21 2024-08-21 5120 4955 120 23450001 GCF_000214825.1 PRJNA224116 SAMN02232061 na reference genome 717773 147268 Thiomicrospira cyclica ALM1 strain=ALM1 na latest Complete Genome Major Full 2011-05-25 ASM21482v1 US DOE Joint Genome Institute GCA_000214825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/825/GCF_000214825.1_ASM21482v1/ na assembly from type material na haploid bacteria 1932455 1932455 47.000000 1 1 1 NCBI RefSeq GCF_000214825.1-RS_2025_12_10 2025-12-10 1725 1672 50 na GCF_000214845.1 PRJNA224116 SAMN00713632 na na 762633 274 Thermus thermophilus SG0.5JP17-16 strain=SG0.5JP17-16 na latest Complete Genome Major Full 2011-05-25 ASM21484v1 US DOE Joint Genome Institute GCA_000214845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/845/GCF_000214845.1_ASM21484v1/ na na na haploid bacteria 2303227 2303227 68.500000 2 2 2 NCBI RefSeq GCF_000214845.1-RS_2026_02_08 2026-02-08 2499 2359 57 na GCF_000214985.1 PRJNA224116 SAMN00114928 AFDB00000000.2 na 903898 470 Acinetobacter baumannii Naval-81 strain=Naval-81 na latest Contig Major Full 2012-08-13 gacin10v1.0 Walter Reed Army Institute of Research GCA_000214985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/214/985/GCF_000214985.1_gacin10v1.0/ na na na haploid bacteria 4080872 4080872 39.000000 3 5 5 NCBI RefSeq GCF_000214985.1-RS_2025_04_22 2025-04-22 3996 3712 95 26195261 GCF_000215005.1 PRJNA224116 SAMN00114924 AFCZ00000000.2 na 903890 470 Acinetobacter baumannii OIFC032 strain=OIFC032 na latest Contig Major Full 2012-08-13 AcbauOIFC032v1.0 Walter Reed Army Institute of Research GCA_000215005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/005/GCF_000215005.1_AcbauOIFC032v1.0/ na na na haploid bacteria 3893886 3893886 39.000000 2 4 4 NCBI RefSeq GCF_000215005.1-RS_2025_04_22 2025-04-22 3740 3463 97 26195261 GCF_000215025.1 PRJNA224116 SAMN00138208 AEXI00000000.1 na 768727 29466 Veillonella parvula ACS-068-V-Sch12 strain=ACS-068-V-Sch12 na latest Contig Major Full 2011-05-25 ASM21502v2 J. Craig Venter Institute GCA_000215025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/025/GCF_000215025.1_ASM21502v2/ na na na haploid bacteria 2152140 2152140 38.500000 0 23 23 NCBI RefSeq GCF_000215025.1-RS_2025_07_30 2025-07-30 1978 1918 51 na GCF_000215065.1 PRJNA224116 SAMN02769645 na na 547145 547145 Hydrogenobaculum sp. SHO strain=SHO na latest Complete Genome Major Full 2011-05-26 ASM21506v1 US DOE Joint Genome Institute GCA_000215065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/065/GCF_000215065.1_ASM21506v1/ na na na haploid bacteria 1552607 1552607 35.000000 1 1 1 NCBI RefSeq GCF_000215065.1-RS_2024_05_05 2024-05-05 1670 1603 54 23435891 GCF_000215085.1 PRJNA224116 SAMN00713633 na reference genome 696281 1564 Desulforamulus ruminis DSM 2154 strain=DSM 2154 na latest Complete Genome Major Full 2011-05-26 ASM21508v1 US DOE Joint Genome Institute GCA_000215085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/085/GCF_000215085.1_ASM21508v1/ na assembly from type material na haploid bacteria 3969014 3969014 47.000000 1 1 1 NCBI RefSeq GCF_000215085.1-RS_2026_03_27 2026-03-27 4006 3878 87 23408247 GCF_000215105.1 PRJNA224116 SAMN00713634 na na 743718 139208 Isoptericola variabilis 225 strain=225 na latest Complete Genome Major Full 2011-05-26 ASM21510v1 US DOE Joint Genome Institute GCA_000215105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/105/GCF_000215105.1_ASM21510v1/ na na na haploid bacteria 3307740 3307740 74.000000 1 1 1 NCBI RefSeq GCF_000215105.1-RS_2026_03_22 2026-03-22 3094 2975 61 na GCF_000215145.1 PRJNA224116 SAMN02436554 AEZK00000000.2 na 869671 562 Escherichia coli 5.0588 strain=5.0588 na latest Contig Major Full 2012-05-02 ASM21514v2 E. coli Reference Center GCA_000215145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/145/GCF_000215145.1_ASM21514v2/ na na na haploid bacteria 5003977 5003977 51.000000 0 31 31 NCBI RefSeq GCF_000215145.1-RS_2025_06_13 2025-06-13 4932 4530 121 na GCF_000215165.1 PRJNA224116 SAMN00031755 AEZM00000000.1 na 869673 562 Escherichia coli H30 strain=H30 na latest Scaffold Major Full 2011-05-27 ASM21516v1 E. coli Reference Center GCA_000215165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/165/GCF_000215165.1_ASM21516v1/ na na na haploid bacteria 5526356 5488183 50.500000 0 19 75 NCBI RefSeq GCF_000215165.1-RS_2025_06_13 2025-06-13 5541 4955 117 na GCF_000215185.1 PRJNA224116 SAMN02436633 AEZQ00000000.2 na 869677 562 Escherichia coli 96.0497 strain=96.0497 na latest Contig Major Full 2012-05-02 ASM21518v2 E. coli Reference Center GCA_000215185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/185/GCF_000215185.1_ASM21518v2/ na na na haploid bacteria 5014260 5014260 51.000000 0 13 13 NCBI RefSeq GCF_000215185.1-RS_2025_06_14 2025-06-14 4903 4607 121 na GCF_000215205.1 PRJNA224116 SAMN02436332 AEZS00000000.2 na 869679 562 Escherichia coli 3.2608 strain=3.2608 na latest Contig Major Full 2012-05-02 ASM21520v2 E. coli Reference Center GCA_000215205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/205/GCF_000215205.1_ASM21520v2/ na na na haploid bacteria 5450436 5450436 50.500000 0 22 22 NCBI RefSeq GCF_000215205.1-RS_2025_06_14 2025-06-14 5492 5068 123 na GCF_000215225.1 PRJNA224116 SAMN02436473 AEZT00000000.2 na 869680 562 Escherichia coli 93.0624 strain=93.0624 na latest Contig Major Full 2012-05-02 ASM21522v2 E. coli Reference Center GCA_000215225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/225/GCF_000215225.1_ASM21522v2/ na na na haploid bacteria 5279127 5279127 50.500000 0 49 49 NCBI RefSeq GCF_000215225.1-RS_2025_06_14 2025-06-14 5293 4872 118 na GCF_000215245.1 PRJNA224116 SAMN02436333 AEZW00000000.2 na 869683 562 Escherichia coli 96.154 strain=96.154 na latest Contig Major Full 2012-05-02 ASM21524v2 E. coli Reference Center GCA_000215245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/245/GCF_000215245.1_ASM21524v2/ na na na haploid bacteria 4954383 4954383 50.500000 0 3 3 NCBI RefSeq GCF_000215245.1-RS_2025_06_14 2025-06-14 4853 4556 119 na GCF_000215285.1 PRJNA224116 SAMN02436475 AFAC00000000.2 na 869689 562 Escherichia coli 3.3884 strain=3.3884 na latest Contig Major Full 2012-05-02 ASM21528v2 E. coli Reference Center GCA_000215285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/285/GCF_000215285.1_ASM21528v2/ na na na haploid bacteria 5225009 5225009 51.000000 0 13 13 NCBI RefSeq GCF_000215285.1-RS_2025_06_13 2025-06-13 5180 4818 125 na GCF_000215325.1 PRJNA224116 SAMN02603411 na na 1031711 305 Ralstonia solanacearum Po82 strain=Po82 na latest Complete Genome Major Full 2011-05-27 ASM21532v1 Institute of Plant Protection, Chinese Academy of Agricultural Sciences GCA_000215325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/325/GCF_000215325.1_ASM21532v1/ na na na haploid bacteria 5430263 5430263 66.500000 2 2 2 NCBI RefSeq GCF_000215325.1-RS_2026_01_27 2026-01-27 4859 4657 68 21685279 GCF_000215345.2 PRJNA224116 SAMN02604193 na na 1036172 28197 Aliarcobacter butzleri 7h1h strain=7h1h na latest Complete Genome Major Full 2013-07-24 ASM21534v3 University of Liverpool GCA_000215345.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/345/GCF_000215345.2_ASM21534v3/ na na na haploid bacteria 2253233 2253233 27.000000 1 1 1 NCBI RefSeq GCF_000215345.2-RS_2026_03_31 2026-03-31 2284 2204 72 23405126;23969057 GCF_000215385.1 PRJNA224116 SAMN00621697 AFNN00000000.1 na 1005705 68892 Streptococcus infantis SK1076 strain=SK1076 na latest Contig Major Full 2011-05-27 ASM21538v1 J. Craig Venter Institute GCA_000215385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/385/GCF_000215385.1_ASM21538v1/ na na na haploid bacteria 1744061 1744061 39.500000 0 30 30 NCBI RefSeq GCF_000215385.1-RS_2025_08_16 2025-08-16 1798 1621 73 na GCF_000215405.1 PRJNA224116 SAMN00116885 AFNO00000000.1 na 904759 1280 Staphylococcus aureus subsp. aureus 21305 strain=21305 na latest Contig Major Full 2011-05-27 ASM21540v2 J. Craig Venter Institute GCA_000215405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/405/GCF_000215405.1_ASM21540v2/ na na na haploid bacteria 2800723 2800723 32.500000 0 38 38 NCBI RefSeq GCF_000215405.1-RS_2025_08_18 2025-08-18 2841 2633 64 na GCF_000215425.1 PRJNA224116 SAMN00116888 AFNP00000000.1 na 904760 1280 Staphylococcus aureus subsp. aureus 21310 strain=21310 na latest Contig Major Full 2011-05-27 ASM21542v2 J. Craig Venter Institute GCA_000215425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/425/GCF_000215425.1_ASM21542v2/ na na na haploid bacteria 2766010 2766010 32.500000 0 70 70 NCBI RefSeq GCF_000215425.1-RS_2025_08_18 2025-08-18 2811 2636 64 na GCF_000215465.1 PRJNA224116 SAMN02470897 AFMN00000000.1 na 1029822 1624 Ligilactobacillus salivarius NIAS840 strain=NIAS840 na latest Contig Major Full 2011-05-31 ASM21546v2 NIAS, Korea GCA_000215465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/465/GCF_000215465.1_ASM21546v2/ na na na haploid bacteria 2046557 2046557 33.000000 0 4 4 NCBI RefSeq GCF_000215465.1-RS_2026_03_24 2026-03-24 2013 1858 108 21914873 GCF_000215485.1 PRJNA224116 SAMN02469629 AFMS00000000.1 na 320483 770 Anaplasma marginale str. Florida strain=Florida na latest Contig Major Full 2011-05-31 ASM21548v2 University of Florida College of Veterinary Medicine GCA_000215485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/485/GCF_000215485.1_ASM21548v2/ na assembly designated as reftype na haploid bacteria 1136981 1136981 50.000000 0 204 204 NCBI RefSeq GCF_000215485.1-RS_2026_01_08 2026-01-08 1069 902 43 21596083 GCF_000215505.1 PRJNA224116 SAMN02469630 AFMT00000000.1 na 1000935 770 Anaplasma marginale str. Florida Relapse strain=Florida Relapse na latest Contig Major Full 2011-05-31 ASM21550v2 University of Florida College of Veterinary Medicine GCA_000215505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/505/GCF_000215505.1_ASM21550v2/ na na na haploid bacteria 1154411 1154411 50.000000 0 61 61 NCBI RefSeq GCF_000215505.1-RS_2026_01_08 2026-01-08 981 890 44 21596083 GCF_000215525.1 PRJNA224116 SAMN02469627 AFMU00000000.1 na 234826 770 Anaplasma marginale str. St. Maries strain=St. Maries na latest Contig Major Full 2011-05-31 ASM21552v2 University of Florida College of Veterinary Medicine GCA_000215525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/525/GCF_000215525.1_ASM21552v2/ na na na haploid bacteria 1155236 1155236 50.000000 0 60 60 NCBI RefSeq GCF_000215525.1-RS_2026_01_08 2026-01-08 996 919 44 21596083 GCF_000215565.1 PRJNA224116 SAMN02469631 AFMX00000000.1 na 1000938 770 Anaplasma marginale str. Oklahoma strain=Oklahoma na latest Contig Major Full 2011-05-31 ASM21556v2 University of Florida College of Veterinary Medicine GCA_000215565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/565/GCF_000215565.1_ASM21556v2/ na na na haploid bacteria 1156921 1156921 50.000000 0 57 57 NCBI RefSeq GCF_000215565.1-RS_2026_01_08 2026-01-08 991 918 44 21596083 GCF_000215605.1 PRJNA224116 SAMN02469625 AFMV00000000.1 na 1000936 770 Anaplasma marginale str. Okeechobee strain=Okeechobee na latest Contig Major Full 2011-05-31 ASM21560v2 University of Florida College of Veterinary Medicine GCA_000215605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/605/GCF_000215605.1_ASM21560v2/ na na na haploid bacteria 1390987 1390987 47.500000 0 403 403 NCBI RefSeq GCF_000215605.1-RS_2026_01_08 2026-01-08 1339 1233 44 21596083 GCF_000215645.1 PRJNA224116 SAMN02603079 na reference genome 945711 65058 Corynebacterium ulcerans 809 strain=809 na latest Complete Genome Major Full 2011-06-02 ASM21564v1 Center for Biotechnology, Bielefeld University GCA_000215645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/645/GCF_000215645.1_ASM21564v1/ na na na haploid bacteria 2502095 2502095 53.500000 1 1 1 NCBI RefSeq GCF_000215645.1-RS_2025_11_20 2025-11-20 2268 2188 66 21801446 GCF_000215665.1 PRJNA224116 SAMN02603080 na na 945712 65058 Corynebacterium ulcerans BR-AD22 strain=BR-AD22 na latest Complete Genome Major Full 2011-06-02 ASM21566v1 Center for Biotechnology, Bielefeld University GCA_000215665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/665/GCF_000215665.1_ASM21566v1/ na na na haploid bacteria 2606374 2606374 53.500000 1 1 1 NCBI RefSeq GCF_000215665.1-RS_2025_12_10 2025-12-10 2413 2323 66 21801446 GCF_000215705.1 PRJNA224116 SAMN02603053 na reference genome 365046 94132 Ramlibacter tataouinensis TTB310 strain=TTB310 na latest Complete Genome Major Full 2011-06-03 ASM21570v1 CEA-CNRS GCA_000215705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/705/GCF_000215705.1_ASM21570v1/ na assembly from type material na haploid bacteria 4070193 4070193 70.000000 1 1 1 NCBI RefSeq GCF_000215705.1-RS_2025_08_04 2025-08-04 4011 3921 50 21912644 GCF_000215745.1 PRJNA224116 SAMN02603581 na na 1028307 548 Klebsiella aerogenes KCTC 2190 strain=KCTC 2190 na latest Complete Genome Major Full 2011-06-03 ASM21574v1 Macrogen Inc. GCA_000215745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/745/GCF_000215745.1_ASM21574v1/ na assembly from type material na haploid bacteria 5280350 5280350 55.000000 1 1 1 NCBI RefSeq GCF_000215745.1-RS_2026_05_01 2026-05-01 5042 4815 119 22493190 GCF_000215775.4 PRJNA224116 SAMN02471892 AEVV00000000.3 na 983918 287 Pseudomonas aeruginosa HB13 strain=138244 na latest Contig Minor Full 2013-08-30 PA13_miseq University of Minho GCA_000215775.5 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/775/GCF_000215775.4_PA13_miseq/ na na na haploid bacteria 6529310 6529310 66.000000 0 23 23 NCBI RefSeq GCF_000215775.4-RS_2025_04_26 2025-04-26 6236 6095 72 21705591 GCF_000215795.4 PRJNA224116 SAMN02471890 AEVW00000000.3 na 983919 287 Pseudomonas aeruginosa HB15 strain=HB15 na latest Contig Minor Full 2013-11-06 PA15_miseq University of Minho GCA_000215795.5 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/795/GCF_000215795.4_PA15_miseq/ na na na haploid bacteria 6637697 6637697 66.000000 0 19 19 NCBI RefSeq GCF_000215795.4-RS_2025_04_18 2025-04-18 6213 6070 72 21705591 GCF_000215815.1 PRJNA224116 SAMN00222102 AFNR00000000.1 na 1029813 1764 Mycobacterium avium subsp. paratuberculosis CLIJ644 strain=CLIJ644 na latest Contig Major Full 2011-06-06 ASM21581v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000215815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/815/GCF_000215815.1_ASM21581v2/ na na na haploid bacteria 4707985 4707985 69.000000 0 636 636 NCBI RefSeq GCF_000215815.1-RS_2025_07_24 2025-07-24 4882 4396 53 na GCF_000215835.1 PRJNA224116 SAMN00222103 AFNS00000000.1 na 1029812 1764 Mycobacterium avium subsp. paratuberculosis CLIJ361 strain=CLIJ361 na latest Contig Major Full 2011-06-06 ASM21583v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000215835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/835/GCF_000215835.1_ASM21583v2/ na na na haploid bacteria 4612386 4612386 69.000000 0 1147 1147 NCBI RefSeq GCF_000215835.1-RS_2025_07_24 2025-07-24 5268 4526 53 na GCF_000215895.1 PRJNA224116 SAMN00713637 na na 693970 62322 Shewanella baltica OS117 strain=OS117 na latest Complete Genome Major Full 2011-06-06 ASM21589v1 US DOE Joint Genome Institute GCA_000215895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/895/GCF_000215895.1_ASM21589v1/ na na na haploid bacteria 5526018 5526018 46.000000 4 4 4 NCBI RefSeq GCF_000215895.1-RS_2026_03_27 2026-03-27 4902 4612 129 22328742 GCF_000215915.2 PRJNA224116 SAMN02472187 AFNT00000000.2 na 1033806 430914 Halorhabdus tiamatea SARL4B strain=SARL4B na latest Contig Major Full 2013-09-12 HLRTI_V2 King Abdullah University of Science and Technology (KAUS) GCA_000215915.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/915/GCF_000215915.2_HLRTI_V2/ na assembly from type material na haploid archaea 3146564 3146564 62.500000 0 72 72 NCBI RefSeq GCF_000215915.2-RS_2025_12_02 2025-12-02 3267 3109 48 21705593;24324765 GCF_000215935.2 PRJNA224116 SAMN02472186 AFNU00000000.2 reference genome 1033810 471825 Haloplasma contractile SSD-17B strain=SSD-17B na latest Contig Major Full 2013-09-12 HLPCO_V2 King Abdullah University of Science and Technology (KAUS) GCA_000215935.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/935/GCF_000215935.2_HLPCO_V2/ na assembly from type material na haploid bacteria 3404505 3404505 32.500000 0 34 34 NCBI RefSeq GCF_000215935.2-RS_2025_12_13 2025-12-13 3064 2977 34 21705599;24324765 GCF_000215955.2 PRJNA224116 SAMN02472183 AFNV00000000.2 reference genome 1033802 180542 Salinisphaera shabanensis E1L3A strain=E1L3A na latest Contig Major Full 2013-09-12 SSPSH_V2 King Abdullah University of Science and Technology (KAUS) GCA_000215955.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/955/GCF_000215955.2_SSPSH_V2/ na assembly from type material na haploid bacteria 3760335 3760335 61.500000 0 41 41 NCBI RefSeq GCF_000215955.2-RS_2026_03_30 2026-03-30 3560 3435 53 21705588;24324765 GCF_000215975.1 PRJNA224116 SAMN02232058 na reference genome 795359 1295609 Thermodesulfobacterium geofontis OPF15 strain=OPF15 na latest Complete Genome Major Full 2011-06-07 ASM21597v1 US DOE Joint Genome Institute GCA_000215975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/975/GCF_000215975.1_ASM21597v1/ na assembly from type material na haploid bacteria 1634377 1634377 30.500000 1 1 1 NCBI RefSeq GCF_000215975.1-RS_2025_12_11 2025-12-11 1699 1628 52 23580711 GCF_000215995.1 PRJNA224116 SAMN02603867 na reference genome 529709 1008460 Pyrococcus yayanosii CH1 strain=CH1 na latest Complete Genome Major Full 2011-06-07 ASM21599v1 Shanghai JiaoTong University GCA_000215995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/215/995/GCF_000215995.1_ASM21599v1/ na assembly from type material na haploid archaea 1716818 1716818 51.500000 1 1 1 NCBI RefSeq GCF_000215995.1-RS_2025_11_21 2025-11-21 1946 1855 58 21705594 GCF_000216015.1 PRJNA224116 SAMN00222100 AFHX00000000.1 na 1029814 1764 Mycobacterium avium subsp. paratuberculosis CLIJ623 strain=CLIJ623 na latest Contig Major Full 2011-06-07 ASM21601v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000216015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/015/GCF_000216015.1_ASM21601v2/ na na na haploid bacteria 4523318 4523318 69.000000 0 915 915 NCBI RefSeq GCF_000216015.1-RS_2025_07_31 2025-07-31 4998 4381 53 na GCF_000216035.1 PRJNA224116 SAMN00254366 AFMJ00000000.1 na 1001603 173 Leptospira interrogans serovar Copenhageni str. Fiocruz R154 strain=Fiocruz R154 na latest Scaffold Major Full 2011-06-07 CLC_glsol163 J. Craig Venter Institute GCA_000216035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/035/GCF_000216035.1_CLC_glsol163/ na na na haploid bacteria 4548239 4547827 35.000000 0 488 518 NCBI RefSeq GCF_000216035.1-RS_2025_07_30 2025-07-30 3901 3675 41 na GCF_000216055.1 PRJNA224116 SAMN00254327 AFMI00000000.1 na 1001602 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2756C6 strain=Fiocruz LV2756C6 na latest Scaffold Major Full 2011-06-07 CLC_glsol105 J. Craig Venter Institute GCA_000216055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/055/GCF_000216055.1_CLC_glsol105/ na na na haploid bacteria 4550216 4549745 35.000000 0 302 335 NCBI RefSeq GCF_000216055.1-RS_2025_07_30 2025-07-30 3772 3623 41 na GCF_000216075.1 PRJNA224116 SAMN00254376 AFMH00000000.1 na 1001987 173 Leptospira interrogans serovar Copenhageni str. 2001025091 strain=2001025091 na latest Scaffold Major Full 2011-06-07 CLC_glsol044 J. Craig Venter Institute GCA_000216075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/075/GCF_000216075.1_CLC_glsol044/ na na na haploid bacteria 4526676 4526568 35.000000 0 309 318 NCBI RefSeq GCF_000216075.1-RS_2025_07_30 2025-07-30 3762 3605 41 na GCF_000216095.1 PRJNA224116 SAMN00254373 AFMG00000000.1 na 1001986 173 Leptospira interrogans serovar Copenhageni str. 2006007831 strain=2006007831 na latest Scaffold Major Full 2011-06-07 CLC_glsol040 J. Craig Venter Institute GCA_000216095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/095/GCF_000216095.1_CLC_glsol040/ na na na haploid bacteria 4549679 4549430 35.000000 0 303 321 NCBI RefSeq GCF_000216095.1-RS_2025_07_30 2025-07-30 3787 3630 41 na GCF_000216195.1 PRJNA224116 SAMN02436336 AFMB00000000.2 na 1001596 173 Leptospira interrogans serovar Djasiman str. LT1649 strain=LT1649 na latest Contig Major Full 2013-03-15 LintLT1649v0.2 J. Craig Venter Institute GCA_000216195.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/195/GCF_000216195.1_LintLT1649v0.2/ na na na haploid bacteria 4679663 4679663 35.000000 0 229 229 NCBI RefSeq GCF_000216195.1-RS_2026_02_15 2026-02-15 3926 3664 42 na GCF_000216235.1 PRJNA224116 SAMN02436629 AFLZ00000000.2 na 1001591 173 Leptospira interrogans str. C10069 strain=C10069 na latest Contig Major Full 2012-10-23 gls454077v2.0 J. Craig Venter Institute GCA_000216235.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/235/GCF_000216235.1_gls454077v2.0/ na na na haploid bacteria 4741083 4741083 35.000000 0 43 43 NCBI RefSeq GCF_000216235.1-RS_2026_02_06 2026-02-06 3969 3717 42 na GCF_000216255.2 PRJNA224116 SAMN02436466 AFLY00000000.2 na 1001593 28182 Leptospira noguchii str. 2006001870 strain=2006001870 na latest Contig Major Full 2012-11-05 gls454041v02 J. Craig Venter Institute GCA_000216255.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/255/GCF_000216255.2_gls454041v02/ na na na haploid bacteria 4813972 4813972 35.500000 0 84 84 NCBI RefSeq GCF_000216255.2-RS_2025_03_19 2025-03-19 4002 3693 44 na GCF_000216275.1 PRJNA224116 SAMN02436545 AFLX00000000.2 na 1001592 28183 Leptospira santarosai str. 2000027870 strain=2000027870 na latest Contig Major Full 2013-03-15 gls454039v2.0 J. Craig Venter Institute GCA_000216275.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/275/GCF_000216275.1_gls454039v2.0/ na na na haploid bacteria 3914343 3914343 41.500000 0 35 35 NCBI RefSeq GCF_000216275.1-RS_2026_01_30 2026-01-30 3564 3322 43 na GCF_000216315.1 PRJNA224116 SAMN02436335 AFLV00000000.2 na 1001589 28184 Leptospira weilii str. 2006001853 strain=2006001853 na latest Contig Major Full 2012-11-05 gls454036v02 J. Craig Venter Institute GCA_000216315.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/315/GCF_000216315.1_gls454036v02/ na na na haploid bacteria 4370034 4370034 41.000000 0 84 84 NCBI RefSeq GCF_000216315.1-RS_2026_02_17 2026-02-17 4084 3784 43 na GCF_000216335.1 PRJNA224116 SAMN02436628 AFLU00000000.2 na 1001588 173 Leptospira interrogans str. 2002000621 strain=2002000621 na latest Contig Major Full 2012-11-02 Lint2002000621v2.0 J. Craig Venter Institute GCA_000216335.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/335/GCF_000216335.1_Lint2002000621v2.0/ na na na haploid bacteria 4918776 4918776 35.000000 0 71 71 NCBI RefSeq GCF_000216335.1-RS_2026_02_06 2026-02-06 4123 3841 42 na GCF_000216375.1 PRJNA224116 SAMN02436546 AFLS00000000.2 na 1001586 173 Leptospira interrogans serovar Bulgarica str. Mallika strain=Mallika na latest Contig Major Full 2012-08-13 LintsBulMalv1.0 J. Craig Venter Institute GCA_000216375.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/375/GCF_000216375.1_LintsBulMalv1.0/ na na na haploid bacteria 4661215 4661215 35.000000 0 41 41 NCBI RefSeq GCF_000216375.1-RS_2026_02_17 2026-02-17 3882 3621 42 na GCF_000216395.1 PRJNA224116 SAMN00254372 AFLR00000000.1 na 996863 173 Leptospira interrogans serovar Copenhageni str. MMD1562 strain=MMD1562 na latest Scaffold Major Full 2011-06-07 CLC_glsol194 J. Craig Venter Institute GCA_000216395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/395/GCF_000216395.1_CLC_glsol194/ na na na haploid bacteria 4536044 4535505 35.000000 0 538 572 NCBI RefSeq GCF_000216395.1-RS_2025_07_31 2025-07-31 3917 3669 41 na GCF_000216415.1 PRJNA224116 SAMN00254369 AFLQ00000000.1 na 996809 173 Leptospira interrogans serovar Canicola str. HAI0024 strain=HAI0024 na latest Scaffold Major Full 2011-06-07 CLC_glsol192 J. Craig Venter Institute GCA_000216415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/415/GCF_000216415.1_CLC_glsol192/ na na na haploid bacteria 4710959 4710523 35.000000 0 338 369 NCBI RefSeq GCF_000216415.1-RS_2026_05_19 2026-05-19 4015 3780 41 na GCF_000216435.1 PRJNA224116 SAMN00254371 AFLP00000000.1 na 996862 173 Leptospira interrogans serovar Copenhageni str. HAI0156 strain=HAI0156 na latest Scaffold Major Full 2011-06-07 CLC_glsol191 J. Craig Venter Institute GCA_000216435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/435/GCF_000216435.1_CLC_glsol191/ na na na haploid bacteria 4627376 4626220 35.000000 0 437 498 NCBI RefSeq GCF_000216435.1-RS_2026_05_19 2026-05-19 3922 3658 41 na GCF_000216455.1 PRJNA224116 SAMN00254368 AFLO00000000.1 na 996808 447106 Leptospira licerasiae serovar Varillal str. MMD0835 strain=MMD0835 na latest Contig Major Full 2011-06-07 CLC_glsol186 J. Craig Venter Institute GCA_000216455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/455/GCF_000216455.1_CLC_glsol186/ na na na haploid bacteria 4198811 4198811 41.000000 0 48 48 NCBI RefSeq GCF_000216455.1-RS_2025_07_24 2025-07-24 3910 3845 43 na GCF_000216475.1 PRJNA224116 SAMN00254367 AFLN00000000.1 na 996861 173 Leptospira interrogans serovar Copenhageni str. R066 strain=R066 na latest Scaffold Major Full 2011-06-07 CLC_glsol165 J. Craig Venter Institute GCA_000216475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/475/GCF_000216475.1_CLC_glsol165/ na na na haploid bacteria 4549934 4549767 35.000000 0 285 297 NCBI RefSeq GCF_000216475.1-RS_2025_07_30 2025-07-30 3769 3609 41 na GCF_000216495.1 PRJNA224116 SAMN00254365 AFLM00000000.1 na 996860 173 Leptospira interrogans serovar Copenhageni str. Fiocruz R83 strain=Fiocruz R83 na latest Scaffold Major Full 2011-06-07 CLC_glsol162 J. Craig Venter Institute GCA_000216495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/495/GCF_000216495.1_CLC_glsol162/ na na na haploid bacteria 4551716 4551514 35.000000 0 273 289 NCBI RefSeq GCF_000216495.1-RS_2025_07_30 2025-07-30 3760 3606 41 na GCF_000216515.1 PRJNA224116 SAMN00254363 AFLL00000000.1 na 996859 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3879 strain=Fiocruz LV3879 na latest Scaffold Major Full 2011-06-07 CLC_glsol158 J. Craig Venter Institute GCA_000216515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/515/GCF_000216515.1_CLC_glsol158/ na na na haploid bacteria 4552227 4551865 35.000000 0 263 290 NCBI RefSeq GCF_000216515.1-RS_2025_07_30 2025-07-30 3771 3617 41 na GCF_000216535.1 PRJNA224116 SAMN00254362 AFLK00000000.1 na 996858 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3834 strain=Fiocruz LV3834 na latest Scaffold Major Full 2011-06-07 CLC_glsol157 J. Craig Venter Institute GCA_000216535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/535/GCF_000216535.1_CLC_glsol157/ na na na haploid bacteria 4544726 4544510 35.000000 0 380 396 NCBI RefSeq GCF_000216535.1-RS_2025_07_30 2025-07-30 3810 3638 41 na GCF_000216555.2 PRJNA224116 SAMN00254364 AFLJ00000000.1 na 996857 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3738 strain=Fiocruz LV3738 na latest Scaffold Minor Full 2011-06-07 CLC_glsol156 J. Craig Venter Institute GCA_000216555.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/555/GCF_000216555.2_CLC_glsol156/ na na na haploid bacteria 4546319 4546142 35.000000 0 396 410 NCBI RefSeq GCF_000216555.2-RS_2025_07_31 2025-07-31 3824 3636 42 na GCF_000216575.1 PRJNA224116 SAMN00254361 AFLI00000000.1 na 996856 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3737 strain=Fiocruz LV3737 na latest Scaffold Major Full 2011-06-07 CLC_glsol155 J. Craig Venter Institute GCA_000216575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/575/GCF_000216575.1_CLC_glsol155/ na na na haploid bacteria 4549040 4548793 35.000000 0 365 383 NCBI RefSeq GCF_000216575.1-RS_2025_07_30 2025-07-30 3817 3642 41 na GCF_000216595.2 PRJNA224116 SAMN00254360 AFLH00000000.2 na 996855 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3726 strain=Fiocruz LV3726 na latest Contig Major Full 2013-05-17 CA_glsol154 J. Craig Venter Institute GCA_000216595.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/595/GCF_000216595.2_CA_glsol154/ na na na haploid bacteria 4857135 4857135 35.000000 0 542 542 NCBI RefSeq GCF_000216595.2-RS_2026_01_13 2026-01-13 4011 3794 41 na GCF_000216615.1 PRJNA224116 SAMN00254359 AFLG00000000.1 na 996854 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3373 strain=Fiocruz LV3373 na latest Scaffold Major Full 2011-06-07 CLC_glsol152 J. Craig Venter Institute GCA_000216615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/615/GCF_000216615.1_CLC_glsol152/ na na na haploid bacteria 4547276 4546917 35.000000 0 368 394 NCBI RefSeq GCF_000216615.1-RS_2025_07_30 2025-07-30 3806 3637 41 na GCF_000216635.1 PRJNA224116 SAMN00254358 AFLF00000000.1 na 996853 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3323 strain=Fiocruz LV3323 na latest Scaffold Major Full 2011-06-07 CLC_glsol151 J. Craig Venter Institute GCA_000216635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/635/GCF_000216635.1_CLC_glsol151/ na na na haploid bacteria 4553950 4553620 35.000000 0 248 270 NCBI RefSeq GCF_000216635.1-RS_2025_07_30 2025-07-30 3767 3616 42 na GCF_000216675.1 PRJNA224116 SAMN00254356 AFLD00000000.1 na 996851 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3096 strain=Fiocruz LV3096 na latest Scaffold Major Full 2011-06-07 CLC_glsol142 J. Craig Venter Institute GCA_000216675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/675/GCF_000216675.1_CLC_glsol142/ na na na haploid bacteria 4554380 4554171 35.000000 0 291 308 NCBI RefSeq GCF_000216675.1-RS_2025_07_30 2025-07-30 3783 3625 41 na GCF_000216695.1 PRJNA224116 SAMN00254355 AFLC00000000.1 na 996850 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3094 strain=Fiocruz LV3094 na latest Scaffold Major Full 2011-06-07 CLC_glsol141 J. Craig Venter Institute GCA_000216695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/695/GCF_000216695.1_CLC_glsol141/ na na na haploid bacteria 4546902 4546496 35.000000 0 351 381 NCBI RefSeq GCF_000216695.1-RS_2025_07_30 2025-07-30 3808 3634 41 na GCF_000216715.1 PRJNA224116 SAMN00254353 AFLB00000000.1 na 996849 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3086 strain=Fiocruz LV3086 na latest Scaffold Major Full 2011-06-07 CLC_glsol140 J. Craig Venter Institute GCA_000216715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/715/GCF_000216715.1_CLC_glsol140/ na na na haploid bacteria 4548625 4548372 35.000000 0 316 335 NCBI RefSeq GCF_000216715.1-RS_2025_07_30 2025-07-30 3776 3621 41 na GCF_000216735.1 PRJNA224116 SAMN00254354 AFLA00000000.1 na 996848 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2973 strain=Fiocruz LV2973 na latest Scaffold Major Full 2011-06-07 CLC_glsol137 J. Craig Venter Institute GCA_000216735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/735/GCF_000216735.1_CLC_glsol137/ na na na haploid bacteria 4549071 4548911 35.000000 0 281 293 NCBI RefSeq GCF_000216735.1-RS_2025_07_30 2025-07-30 3763 3606 41 na GCF_000216755.1 PRJNA224116 SAMN00254352 AFKZ00000000.1 na 996847 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2959 strain=Fiocruz LV2959 na latest Scaffold Major Full 2011-06-07 CLC_glsol136 J. Craig Venter Institute GCA_000216755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/755/GCF_000216755.1_CLC_glsol136/ na na na haploid bacteria 4551772 4551174 35.000000 0 303 339 NCBI RefSeq GCF_000216755.1-RS_2025_07_30 2025-07-30 3781 3626 42 na GCF_000216775.1 PRJNA224116 SAMN00254351 AFKY00000000.1 na 996846 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2958 strain=Fiocruz LV2958 na latest Scaffold Major Full 2011-06-07 CLC_glsol135 J. Craig Venter Institute GCA_000216775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/775/GCF_000216775.1_CLC_glsol135/ na na na haploid bacteria 4536065 4535873 35.000000 0 297 312 NCBI RefSeq GCF_000216775.1-RS_2025_07_30 2025-07-30 3758 3607 41 na GCF_000216795.1 PRJNA224116 SAMN00254350 AFKX00000000.1 na 996845 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2953 strain=Fiocruz LV2953 na latest Scaffold Major Full 2011-06-07 CLC_glsol134 J. Craig Venter Institute GCA_000216795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/795/GCF_000216795.1_CLC_glsol134/ na na na haploid bacteria 4543913 4543739 35.000000 0 417 430 NCBI RefSeq GCF_000216795.1-RS_2025_07_30 2025-07-30 3841 3644 42 na GCF_000216815.1 PRJNA224116 SAMN00254349 AFKW00000000.1 na 996844 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2948 strain=Fiocruz LV2948 na latest Scaffold Major Full 2011-06-07 CLC_glsol133 J. Craig Venter Institute GCA_000216815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/815/GCF_000216815.1_CLC_glsol133/ na na na haploid bacteria 4540401 4540082 35.000000 0 433 457 NCBI RefSeq GCF_000216815.1-RS_2025_07_30 2025-07-30 3819 3630 41 na GCF_000216835.1 PRJNA224116 SAMN00254347 AFKV00000000.1 na 996843 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2933 strain=Fiocruz LV2933 na latest Scaffold Major Full 2011-06-07 CLC_glsol132 J. Craig Venter Institute GCA_000216835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/835/GCF_000216835.1_CLC_glsol132/ na na na haploid bacteria 4545745 4545460 35.000000 0 534 556 NCBI RefSeq GCF_000216835.1-RS_2025_07_31 2025-07-31 3931 3685 41 na GCF_000216855.1 PRJNA224116 SAMN00254348 AFKU00000000.1 na 996842 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2908 strain=Fiocruz LV2908 na latest Scaffold Major Full 2011-06-07 CLC_glsol130 J. Craig Venter Institute GCA_000216855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/855/GCF_000216855.1_CLC_glsol130/ na na na haploid bacteria 4534768 4534239 35.000000 0 608 645 NCBI RefSeq GCF_000216855.1-RS_2025_07_31 2025-07-31 3943 3684 41 na GCF_000216875.1 PRJNA224116 SAMN00254346 AFKT00000000.1 na 996841 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2897 strain=Fiocruz LV2897 na latest Scaffold Major Full 2011-06-07 CLC_glsol129 J. Craig Venter Institute GCA_000216875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/875/GCF_000216875.1_CLC_glsol129/ na na na haploid bacteria 4547329 4546983 35.000000 0 366 391 NCBI RefSeq GCF_000216875.1-RS_2025_07_30 2025-07-30 3802 3633 41 na GCF_000216895.1 PRJNA224116 SAMN00254345 AFKS00000000.1 na 996840 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2840 strain=Fiocruz LV2840 na latest Scaffold Major Full 2011-06-07 CLC_glsol127 J. Craig Venter Institute GCA_000216895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/895/GCF_000216895.1_CLC_glsol127/ na na na haploid bacteria 4545087 4544835 35.000000 0 520 539 NCBI RefSeq GCF_000216895.1-RS_2025_12_28 2025-12-28 3901 3675 41 na GCF_000216915.1 PRJNA224116 SAMN00254344 AFKR00000000.1 na 996839 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2832 strain=Fiocruz LV2832 na latest Scaffold Major Full 2011-06-07 CLC_glsol126 J. Craig Venter Institute GCA_000216915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/915/GCF_000216915.1_CLC_glsol126/ na na na haploid bacteria 4544823 4544614 35.000000 0 376 391 NCBI RefSeq GCF_000216915.1-RS_2025_07_30 2025-07-30 3818 3642 41 na GCF_000216935.1 PRJNA224116 SAMN00254343 AFKQ00000000.1 na 996838 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2825 strain=Fiocruz LV2825 na latest Scaffold Major Full 2011-06-07 CLC_glsol125 J. Craig Venter Institute GCA_000216935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/935/GCF_000216935.1_CLC_glsol125/ na na na haploid bacteria 4551353 4551133 35.000000 0 371 388 NCBI RefSeq GCF_000216935.1-RS_2025_07_30 2025-07-30 3806 3635 41 na GCF_000216955.1 PRJNA224116 SAMN00254342 AFKP00000000.1 na 996837 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2812 strain=Fiocruz LV2812 na latest Scaffold Major Full 2011-06-07 CLC_glsol123 J. Craig Venter Institute GCA_000216955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/955/GCF_000216955.1_CLC_glsol123/ na na na haploid bacteria 4554523 4554050 35.000000 0 257 290 NCBI RefSeq GCF_000216955.1-RS_2025_07_30 2025-07-30 3762 3609 42 na GCF_000216975.1 PRJNA224116 SAMN00254341 AFKO00000000.1 na 996836 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2811 strain=Fiocruz LV2811 na latest Scaffold Major Full 2011-06-07 CLC_glsol122 J. Craig Venter Institute GCA_000216975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/975/GCF_000216975.1_CLC_glsol122/ na na na haploid bacteria 4551718 4551495 35.000000 0 286 304 NCBI RefSeq GCF_000216975.1-RS_2025_07_30 2025-07-30 3766 3609 41 na GCF_000216995.1 PRJNA224116 SAMN00254338 AFKN00000000.1 na 996835 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2806 strain=Fiocruz LV2806 na latest Scaffold Major Full 2011-06-07 CLC_glsol120 J. Craig Venter Institute GCA_000216995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/216/995/GCF_000216995.1_CLC_glsol120/ na na na haploid bacteria 4544162 4543914 35.000000 0 418 436 NCBI RefSeq GCF_000216995.1-RS_2025_07_30 2025-07-30 3839 3634 41 na GCF_000217015.2 PRJNA224116 SAMN00254340 AFKM00000000.1 na 996834 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2805 strain=Fiocruz LV2805 na latest Scaffold Minor Full 2011-06-07 CLC_glsol119 J. Craig Venter Institute GCA_000217015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/015/GCF_000217015.2_CLC_glsol119/ na na na haploid bacteria 4549183 4548787 35.000000 0 338 368 NCBI RefSeq GCF_000217015.2-RS_2025_12_27 2025-12-27 3805 3633 41 na GCF_000217035.1 PRJNA224116 SAMN00254337 AFKL00000000.1 na 996833 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2804 strain=Fiocruz LV2804 na latest Scaffold Major Full 2011-06-07 CLC_glsol118 J. Craig Venter Institute GCA_000217035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/035/GCF_000217035.1_CLC_glsol118/ na na na haploid bacteria 4551058 4550667 35.000000 0 419 445 NCBI RefSeq GCF_000217035.1-RS_2025_07_30 2025-07-30 3840 3644 41 na GCF_000217055.1 PRJNA224116 SAMN00254339 AFKK00000000.1 na 996832 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2799 strain=Fiocruz LV2799 na latest Scaffold Major Full 2011-06-07 CLC_glsol117 J. Craig Venter Institute GCA_000217055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/055/GCF_000217055.1_CLC_glsol117/ na na na haploid bacteria 4551211 4550842 35.000000 0 409 434 NCBI RefSeq GCF_000217055.1-RS_2025_07_30 2025-07-30 3843 3652 41 na GCF_000217075.1 PRJNA224116 SAMN00254336 AFKJ00000000.1 na 996831 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2791 strain=Fiocruz LV2791 na latest Scaffold Major Full 2011-06-07 CLC_glsol116 J. Craig Venter Institute GCA_000217075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/075/GCF_000217075.1_CLC_glsol116/ na na na haploid bacteria 4553658 4553173 35.000000 0 247 273 NCBI RefSeq GCF_000217075.1-RS_2025_07_30 2025-07-30 3758 3611 42 na GCF_000217095.1 PRJNA224116 SAMN00254335 AFKI00000000.1 na 996830 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2790 strain=Fiocruz LV2790 na latest Scaffold Major Full 2011-06-07 CLC_glsol115 J. Craig Venter Institute GCA_000217095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/095/GCF_000217095.1_CLC_glsol115/ na na na haploid bacteria 4552789 4552514 35.000000 0 253 272 NCBI RefSeq GCF_000217095.1-RS_2025_07_30 2025-07-30 3779 3623 42 na GCF_000217115.1 PRJNA224116 SAMN00254334 AFKH00000000.1 na 996829 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2787 strain=Fiocruz LV2787 na latest Scaffold Major Full 2011-06-07 CLC_glsol114 J. Craig Venter Institute GCA_000217115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/115/GCF_000217115.1_CLC_glsol114/ na na na haploid bacteria 4555000 4554641 35.000000 0 251 276 NCBI RefSeq GCF_000217115.1-RS_2025_07_30 2025-07-30 3762 3609 42 na GCF_000217135.1 PRJNA224116 SAMN00254333 AFKG00000000.1 na 996828 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2776 strain=Fiocruz LV2776 na latest Scaffold Major Full 2011-06-07 CLC_glsol112 J. Craig Venter Institute GCA_000217135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/135/GCF_000217135.1_CLC_glsol112/ na na na haploid bacteria 4552876 4552501 35.000000 0 248 274 NCBI RefSeq GCF_000217135.1-RS_2025_07_30 2025-07-30 3771 3621 42 na GCF_000217155.1 PRJNA224116 SAMN00254332 AFKF00000000.1 na 996827 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2772 strain=Fiocruz LV2772 na latest Scaffold Major Full 2011-06-07 CLC_glsol111 J. Craig Venter Institute GCA_000217155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/155/GCF_000217155.1_CLC_glsol111/ na na na haploid bacteria 4552748 4552443 35.000000 0 245 268 NCBI RefSeq GCF_000217155.1-RS_2025_07_30 2025-07-30 3760 3609 42 na GCF_000217195.1 PRJNA224116 SAMN00254330 AFKD00000000.1 na 996825 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2767 strain=Fiocruz LV2767 na latest Scaffold Major Full 2011-06-07 CLC_glsol109 J. Craig Venter Institute GCA_000217195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/195/GCF_000217195.1_CLC_glsol109/ na na na haploid bacteria 4552421 4552052 35.000000 0 257 283 NCBI RefSeq GCF_000217195.1-RS_2025_07_30 2025-07-30 3765 3617 42 na GCF_000217215.1 PRJNA224116 SAMN00254329 AFKC00000000.1 na 996824 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2763 strain=Fiocruz LV2763 na latest Scaffold Major Full 2011-06-07 CLC_glsol107 J. Craig Venter Institute GCA_000217215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/215/GCF_000217215.1_CLC_glsol107/ na na na haploid bacteria 4553702 4553146 35.000000 0 242 286 NCBI RefSeq GCF_000217215.1-RS_2025_07_30 2025-07-30 3767 3610 42 na GCF_000217235.1 PRJNA224116 SAMN00254328 AFKB00000000.1 na 996823 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2759 strain=Fiocruz LV2759 na latest Scaffold Major Full 2011-06-07 CLC_glsol106 J. Craig Venter Institute GCA_000217235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/235/GCF_000217235.1_CLC_glsol106/ na na na haploid bacteria 4554223 4553774 35.000000 0 261 290 NCBI RefSeq GCF_000217235.1-RS_2025_07_30 2025-07-30 3774 3620 42 na GCF_000217255.1 PRJNA224116 SAMN00254326 AFKA00000000.1 na 996822 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2752 strain=Fiocruz LV2752 na latest Scaffold Major Full 2011-06-07 CLC_glsol104 J. Craig Venter Institute GCA_000217255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/255/GCF_000217255.1_CLC_glsol104/ na na na haploid bacteria 4548231 4547854 35.000000 0 316 343 NCBI RefSeq GCF_000217255.1-RS_2025_07_30 2025-07-30 3783 3624 42 na GCF_000217295.2 PRJNA224116 SAMN00254380 AFJV00000000.2 na 996817 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV251 strain=Fiocruz LV251 na latest Contig Major Full 2013-05-17 CA_glsol085 J. Craig Venter Institute GCA_000217295.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/295/GCF_000217295.2_CA_glsol085/ na na na haploid bacteria 4626945 4626945 35.000000 0 169 169 NCBI RefSeq GCF_000217295.2-RS_2026_01_13 2026-01-13 3821 3639 44 na GCF_000217315.1 PRJNA224116 SAMN00254382 AFJU00000000.1 na 996816 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV239 strain=Fiocruz LV239 na latest Scaffold Major Full 2011-06-07 CLC_glsol084 J. Craig Venter Institute GCA_000217315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/315/GCF_000217315.1_CLC_glsol084/ na na na haploid bacteria 4548995 4548802 35.000000 0 311 326 NCBI RefSeq GCF_000217315.1-RS_2025_07_30 2025-07-30 3794 3636 42 na GCF_000217335.2 PRJNA224116 SAMN00254379 AFJT00000000.2 na 996815 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV224 strain=Fiocruz LV224 na latest Contig Major Full 2013-05-17 CA_glsol083 J. Craig Venter Institute GCA_000217335.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/335/GCF_000217335.2_CA_glsol083/ na na na haploid bacteria 4868579 4868579 35.000000 0 409 409 NCBI RefSeq GCF_000217335.2-RS_2026_01_13 2026-01-13 4037 3834 43 na GCF_000217355.1 PRJNA224116 SAMN00254381 AFJS00000000.1 na 996814 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV212 strain=Fiocruz LV212 na latest Scaffold Major Full 2011-06-07 CLC_glsol082 J. Craig Venter Institute GCA_000217355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/355/GCF_000217355.1_CLC_glsol082/ na na na haploid bacteria 4547512 4547316 35.000000 0 403 417 NCBI RefSeq GCF_000217355.1-RS_2025_07_30 2025-07-30 3839 3645 42 na GCF_000217375.1 PRJNA224116 SAMN00254375 AFJR00000000.1 na 996813 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV204 strain=Fiocruz LV204 na latest Scaffold Major Full 2011-06-07 CLC_glsol081 J. Craig Venter Institute GCA_000217375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/375/GCF_000217375.1_CLC_glsol081/ na na na haploid bacteria 4545613 4545421 35.000000 0 463 478 NCBI RefSeq GCF_000217375.1-RS_2025_07_30 2025-07-30 3855 3651 42 na GCF_000217395.1 PRJNA224116 SAMN00254378 AFJQ00000000.1 na 996812 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV199 strain=Fiocruz LV199 na latest Scaffold Major Full 2011-06-07 CLC_glsol080 J. Craig Venter Institute GCA_000217395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/395/GCF_000217395.1_CLC_glsol080/ na na na haploid bacteria 4552094 4551927 35.000000 0 339 351 NCBI RefSeq GCF_000217395.1-RS_2025_07_30 2025-07-30 3790 3629 41 na GCF_000217415.1 PRJNA224116 SAMN00254377 AFJP00000000.1 na 996811 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV192 strain=Fiocruz LV192 na latest Scaffold Major Full 2011-06-07 CLC_glsol079 J. Craig Venter Institute GCA_000217415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/415/GCF_000217415.1_CLC_glsol079/ na na na haploid bacteria 4549658 4549440 35.000000 0 312 329 NCBI RefSeq GCF_000217415.1-RS_2025_07_30 2025-07-30 3799 3641 41 na GCF_000217435.1 PRJNA224116 SAMN00254370 AFJO00000000.1 na 996810 173 Leptospira interrogans serovar Grippotyphosa str. 2006006971 strain=2006006971 na latest Scaffold Major Full 2011-06-07 CLC_glsol035 J. Craig Venter Institute GCA_000217435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/435/GCF_000217435.1_CLC_glsol035/ na na na haploid bacteria 4805969 4805514 35.000000 0 842 874 NCBI RefSeq GCF_000217435.1-RS_2026_05_27 2026-05-27 4428 4002 40 na GCF_000217455.2 PRJNA224116 SAMN02436630 AFJN00000000.2 na 996805 28183 Leptospira santarosai str. 2000030832 strain=2000030832 na latest Contig Major Full 2013-03-15 gls454040v2.0 J. Craig Venter Institute GCA_000217455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/455/GCF_000217455.2_gls454040v2.0/ na na na haploid bacteria 3996157 3996157 42.000000 0 45 45 NCBI RefSeq GCF_000217455.2-RS_2026_01_30 2026-01-30 3683 3442 42 na GCF_000217515.1 PRJNA224116 SAMN02436548 AFJK00000000.2 na 996802 173 Leptospira interrogans str. 2002000624 strain=2002000624 na latest Contig Major Full 2012-10-23 gls454027v2.0 J. Craig Venter Institute GCA_000217515.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/515/GCF_000217515.1_gls454027v2.0/ na na na haploid bacteria 4918548 4918548 35.000000 0 66 66 NCBI RefSeq GCF_000217515.1-RS_2026_02_06 2026-02-06 4139 3877 43 na GCF_000217535.2 PRJNA224116 SAMN00254991 AFJW00000000.2 na 996818 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV130 strain=Fiocruz LV130 na latest Contig Major Full 2013-05-17 CA_glsol087 J. Craig Venter Institute GCA_000217535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/535/GCF_000217535.2_CA_glsol087/ na na na haploid bacteria 4639461 4639461 35.000000 0 157 157 NCBI RefSeq GCF_000217535.2-RS_2026_01_13 2026-01-13 3842 3671 46 na GCF_000217555.2 PRJNA224116 SAMN00254992 AFJX00000000.2 na 996819 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2755 strain=Fiocruz LV2755 na latest Contig Major Full 2013-05-17 CA_glsol088 J. Craig Venter Institute GCA_000217555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/555/GCF_000217555.2_CA_glsol088/ na na na haploid bacteria 4737748 4737748 35.000000 0 219 219 NCBI RefSeq GCF_000217555.2-RS_2026_01_13 2026-01-13 3899 3721 45 na GCF_000217575.2 PRJNA224116 SAMN00254324 AFJY00000000.2 na 996820 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2756 C1 strain=Fiocruz 2756 C1 na latest Contig Major Full 2013-05-17 CA_glsol089 J. Craig Venter Institute GCA_000217575.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/575/GCF_000217575.2_CA_glsol089/ na na na haploid bacteria 4699303 4699303 35.000000 0 364 364 NCBI RefSeq GCF_000217575.2-RS_2026_01_27 2026-01-27 3900 3698 42 na GCF_000217615.1 PRJNA224116 SAMN02602996 na na 1031709 1747 Cutibacterium acnes 6609 strain=6609 na latest Complete Genome Major Full 2011-06-08 ASM21761v1 BAYGEN GCA_000217615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/615/GCF_000217615.1_ASM21761v1/ na na na haploid bacteria 2560282 2560282 60.000000 1 1 1 NCBI RefSeq GCF_000217615.1-RS_2026_03_27 2026-03-27 2475 2334 58 21705602 GCF_000217655.1 PRJNA224116 SAMN02603006 na reference genome 545776 53435 Treponema paraluiscuniculi Cuniculi A strain=Cuniculi A na latest Complete Genome Major Full 2011-06-09 ASM21765v1 Baylor College of Medicine GCA_000217655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/655/GCF_000217655.1_ASM21765v1/ na assembly designated as reftype na haploid bacteria 1133390 1133390 52.500000 1 1 1 NCBI RefSeq GCF_000217655.1-RS_2026_03_30 2026-03-30 1035 965 54 21655244 GCF_000217675.1 PRJNA224116 SAMN02603689 na na 882102 55601 Vibrio anguillarum 775 strain=775 na latest Complete Genome Major Full 2011-06-09 ASM21767v1 Oregon Health and Science University GCA_000217675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/675/GCF_000217675.1_ASM21767v1/ na na na haploid bacteria 4052047 4052047 44.500000 2 2 2 NCBI RefSeq GCF_000217675.1-RS_2026_01_02 2026-01-02 3683 3398 111 21576332 GCF_000217695.1 PRJNA224116 SAMN02469354 AFOG00000000.1 na 1038844 562 Escherichia coli O104:H4 str. TY-2482 strain=TY-2482 na latest Contig Major Full 2011-06-06 ASM21769v2 BGI GCA_000217695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/695/GCF_000217695.1_ASM21769v2/ na na na haploid bacteria 5291054 5291054 50.500000 0 451 451 NCBI RefSeq GCF_000217695.1-RS_2025_06_13 2025-06-13 5418 4967 57 na GCF_000217715.1 PRJNA224116 SAMN02232028 na reference genome 797210 387343 Halopiger xanaduensis SH-6 strain=SH-6 na latest Complete Genome Major Full 2011-06-09 ASM21771v1 US DOE Joint Genome Institute GCA_000217715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/715/GCF_000217715.1_ASM21771v1/ na assembly from type material na haploid archaea 4355268 4355268 65.000000 4 4 4 NCBI RefSeq GCF_000217715.1-RS_2025_11_20 2025-11-20 4343 4229 62 22675596 GCF_000217735.1 PRJNA224116 SAMN02470918 AFOI00000000.1 na 1041521 1624 Ligilactobacillus salivarius GJ-24 strain=GJ-24 na latest Contig Major Full 2011-06-09 ASM21773v2 Chung-Ang University, Korea GCA_000217735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/735/GCF_000217735.1_ASM21773v2/ na na na haploid bacteria 1995968 1995968 33.000000 0 11 11 NCBI RefSeq GCF_000217735.1-RS_2026_03_24 2026-03-24 1988 1829 95 21742893 GCF_000217755.1 PRJNA224116 SAMN02470898 AFOJ00000000.1 na 1040964 1623 Ligilactobacillus ruminis SPM0211 strain=SPM0211 na latest Contig Major Full 2011-06-09 ASM21775v1 Center for Human and Environmental Microbiome, Korea GCA_000217755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/755/GCF_000217755.1_ASM21775v1/ na na na haploid bacteria 2172227 2172227 43.500000 0 12 12 NCBI RefSeq GCF_000217755.1-RS_2026_01_27 2026-01-27 2132 2021 66 21742873 GCF_000217775.1 PRJNA224116 SAMN02470189 AFOX00000000.1 na 1036171 1406 Paenibacillus polymyxa ATCC 842 strain=ATCC 842 na latest Scaffold Major Full 2011-06-10 PPt02 Korea Research Institute of Bioscience & Biotechnology GCA_000217775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/775/GCF_000217775.1_PPt02/ na assembly from type material na haploid bacteria 5903580 5898380 45.000000 0 13 65 NCBI RefSeq GCF_000217775.1-RS_2026_04_21 2026-04-21 5426 5278 82 21742878 GCF_000217795.1 PRJNA224116 SAMN02232057 na reference genome 667014 171695 Thermodesulfatator indicus DSM 15286 strain=DSM 15286 na latest Complete Genome Major Full 2011-06-10 ASM21779v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000217795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/795/GCF_000217795.1_ASM21779v1/ na assembly from type material na haploid bacteria 2322224 2322224 42.500000 1 1 1 NCBI RefSeq GCF_000217795.1-RS_2026_05_01 2026-05-01 2292 2211 60 22768359 GCF_000217815.1 PRJNA224116 SAMN02232059 na reference genome 688269 119394 Pseudothermotoga thermarum DSM 5069 strain=DSM 5069 na latest Complete Genome Major Full 2011-06-10 ASM21781v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000217815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/815/GCF_000217815.1_ASM21781v1/ na assembly from type material na haploid bacteria 2039943 2039943 40.500000 1 1 1 NCBI RefSeq GCF_000217815.1-RS_2025_12_10 2025-12-10 2081 2004 52 na GCF_000217835.1 PRJNA224116 SAMN02603866 na na 941639 1398 Heyndrickxia coagulans 2-6 strain=2-6 na latest Complete Genome Major Full 2011-06-10 ASM21783v1 Shanghai Jiao Tonny University GCA_000217835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/835/GCF_000217835.1_ASM21783v1/ na na na haploid bacteria 3073079 3073079 47.500000 1 1 1 NCBI RefSeq GCF_000217835.1-RS_2025_08_26 2025-08-26 3017 2819 104 21705584 GCF_000217895.1 PRJNA224116 SAMN00017129 AFOW00000000.1 na 754092 623 Shigella flexneri SFJ17B strain=SFJ17B na latest Contig Major Full 2011-06-10 ASM21789v2 Institute for Genome Sciences GCA_000217895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/895/GCF_000217895.1_ASM21789v2/ na na na haploid bacteria 4729738 4729738 51.000000 0 52 52 NCBI RefSeq GCF_000217895.1-RS_2025_07_19 2025-07-19 4870 3972 148 na GCF_000217915.1 PRJNA224116 SAMN02469863 AFOZ00000000.1 na 327275 327275 Shewanella sp. HN-41 strain=HN-41 na latest Contig Major Full 2011-06-10 ASM21791v1 Gwangju Institute of Science and Technology GCA_000217915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/915/GCF_000217915.1_ASM21791v1/ na na na haploid bacteria 4414027 4414027 46.500000 0 47 47 NCBI RefSeq GCF_000217915.1-RS_2025_03_25 2025-03-25 3918 3660 79 21868804 GCF_000217935.1 PRJNA224116 SAMN02469972 AFHI00000000.1 na 506534 506534 Rheinheimera sp. A13L strain=A13L na latest Contig Major Full 2011-06-10 Rhein_1.0 Institute of Genomics and Integrative Biology GCA_000217935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/935/GCF_000217935.1_Rhein_1.0/ na na na haploid bacteria 4523491 4523491 46.000000 0 72 72 NCBI RefSeq GCF_000217935.1-RS_2025_08_27 2025-08-27 4016 3922 74 21742876 GCF_000217955.3 PRJNA224116 SAMN02471959 AFOY00000000.2 na 1042209 294 Pseudomonas fluorescens HK44 strain=HK44 na latest Scaffold Major Full 2014-02-28 PfluHK442.0 Center for Environmental Biotechnology GCA_000217955.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/955/GCF_000217955.3_PfluHK442.0/ na na na haploid bacteria 6195154 6195154 58.500000 4 32 32 NCBI RefSeq GCF_000217955.3-RS_2025_06_03 2025-06-03 5962 5573 67 21742869 GCF_000217975.1 PRJNA224116 SAMN00765209 AFPN00000000.2 na 1042804 562 Escherichia coli O104:H4 str. H112180280 strain=H112180280 na latest Scaffold Major Full 2011-07-26 ASM21797v2 Health Protection Agency (HPA, London, UK) GCA_000217975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/975/GCF_000217975.1_ASM21797v2/ na na na haploid bacteria 5384521 5381621 50.500000 0 3 32 NCBI RefSeq GCF_000217975.1-RS_2025_06_14 2025-06-14 5351 4960 102 na GCF_000217995.1 PRJNA224116 SAMN02232039 na reference genome 679901 39669 Methanosalsum zhilinae DSM 4017 strain=DSM 4017 na latest Complete Genome Major Full 2011-06-13 ASM21799v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000217995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/217/995/GCF_000217995.1_ASM21799v1/ na assembly from type material na haploid archaea 2138444 2138444 39.000000 1 1 1 NCBI RefSeq GCF_000217995.1-RS_2025_11_21 2025-11-21 2081 1994 61 na GCF_000218035.1 PRJNA224116 SAMN00222093 AFPC00000000.1 na 1029815 1764 Mycobacterium avium subsp. paratuberculosis Pt139 strain=Pt139 na latest Contig Major Full 2011-06-13 ASM21803v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/035/GCF_000218035.1_ASM21803v2/ na na na haploid bacteria 4647327 4647327 69.000000 0 752 752 NCBI RefSeq GCF_000218035.1-RS_2025_07_24 2025-07-24 4932 4371 53 na GCF_000218055.1 PRJNA224116 SAMN00222094 AFPD00000000.1 na 1029816 1764 Mycobacterium avium subsp. paratuberculosis Pt144 strain=Pt144 na latest Contig Major Full 2011-06-13 ASM21805v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/055/GCF_000218055.1_ASM21805v2/ na na na haploid bacteria 4582918 4582918 69.000000 0 838 838 NCBI RefSeq GCF_000218055.1-RS_2025_07_24 2025-07-24 4912 4391 52 na GCF_000218075.1 PRJNA224116 SAMN00222095 AFPE00000000.1 na 1029817 1764 Mycobacterium avium subsp. paratuberculosis Pt145 strain=Pt145 na latest Contig Major Full 2011-06-13 ASM21807v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/075/GCF_000218075.1_ASM21807v2/ na na na haploid bacteria 4568858 4568858 69.000000 0 916 916 NCBI RefSeq GCF_000218075.1-RS_2025_07_24 2025-07-24 4940 4360 51 na GCF_000218095.1 PRJNA224116 SAMN00222096 AFPF00000000.1 na 1029818 1764 Mycobacterium avium subsp. paratuberculosis Pt146 strain=Pt146 na latest Contig Major Full 2011-06-13 ASM21809v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/095/GCF_000218095.1_ASM21809v2/ na na na haploid bacteria 4582551 4582551 69.000000 0 955 955 NCBI RefSeq GCF_000218095.1-RS_2025_07_24 2025-07-24 5055 4421 53 na GCF_000218135.1 PRJNA224116 SAMN00222098 AFPH00000000.1 na 1029820 1764 Mycobacterium avium subsp. paratuberculosis Pt155 strain=Pt155 na latest Contig Major Full 2011-06-13 ASM21813v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/135/GCF_000218135.1_ASM21813v2/ na na na haploid bacteria 4560778 4560778 69.000000 0 957 957 NCBI RefSeq GCF_000218135.1-RS_2025_07_08 2025-07-08 4969 4412 50 na GCF_000218155.1 PRJNA224116 SAMN00222099 AFPI00000000.1 na 1029821 1764 Mycobacterium avium subsp. paratuberculosis Pt164 strain=Pt164 na latest Contig Major Full 2011-06-13 ASM21815v2 The Commonwealth Scientific and Industrial Research Organisation (CSIRO) GCA_000218155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/155/GCF_000218155.1_ASM21815v2/ na na na haploid bacteria 4669710 4669710 69.000000 0 592 592 NCBI RefSeq GCF_000218155.1-RS_2025_07_24 2025-07-24 4851 4357 53 na GCF_000218235.1 PRJNA224116 SAMN02256517 AFJE00000000.1 reference genome 688246 310514 Hallella multisaccharivorax DSM 17128 strain=DSM 17128 na latest Scaffold Major Full 2011-06-14 ASM21823v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000218235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/235/GCF_000218235.1_ASM21823v1/ na assembly from type material na haploid bacteria 3388644 3387524 48.500000 0 3 27 NCBI RefSeq GCF_000218235.1-RS_2026_03_12 2026-03-12 2853 2676 72 22180809 GCF_000218265.1 PRJNA224116 SAMN02603056 na na 707241 382 Sinorhizobium meliloti SM11 strain=SM11 na latest Complete Genome Major Full 2011-06-14 ASM21826v1 CeBiTec, Bielefeld University GCA_000218265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/265/GCF_000218265.1_ASM21826v1/ na na na haploid bacteria 7173736 7173736 62.000000 3 3 3 NCBI RefSeq GCF_000218265.1-RS_2026_04_04 2026-04-04 7025 6602 69 21396969 GCF_000218305.1 PRJNA224116 SAMN02604342 na na 1030009 1639 Listeria monocytogenes M7 strain=M7 na latest Complete Genome Major Full 2011-06-14 ASM21830v1 Zhejiang University GCA_000218305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/305/GCF_000218305.1_ASM21830v1/ na na na haploid bacteria 2976163 2976163 38.000000 1 1 1 NCBI RefSeq GCF_000218305.1-RS_2025_02_01 2025-02-01 3048 2924 89 21742872 GCF_000218325.1 PRJNA224116 SAMN02463791 ACWH00000000.1 na 665954 28116 Bacteroides ovatus 3_8_47FAA strain=3_8_47FAA na latest Scaffold Major Full 2011-06-15 Bact_ovat_3_8_47FAA_V1 Broad Institute GCA_000218325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/325/GCF_000218325.1_Bact_ovat_3_8_47FAA_V1/ na na na haploid bacteria 6549476 6545234 42.000000 0 25 42 NCBI RefSeq GCF_000218325.1-RS_2026_01_08 2026-01-08 5072 4908 88 na GCF_000218365.1 PRJNA224116 SAMN02463820 ADCL00000000.1 na 457387 457387 Bacteroides sp. 1_1_30 strain=1_1_30 na latest Scaffold Major Full 2011-06-15 Bacteroides_sp_1_1_30_V1 Broad Institute GCA_000218365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/365/GCF_000218365.1_Bacteroides_sp_1_1_30_V1/ na na na haploid bacteria 6480532 6441725 42.000000 0 73 171 NCBI RefSeq GCF_000218365.1-RS_2024_08_13 2024-08-13 5289 5030 90 na GCF_000218485.1 PRJNA224116 SAMN02470930 AFPB00000000.1 reference genome 980584 980584 Aquimarina agarivorans strain=HQM9 na latest Contig Major Full 2011-06-14 ASM21848v2 Shandong University at Weihai GCA_000218485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/485/GCF_000218485.1_ASM21848v2/ na assembly from type material na haploid bacteria 4073879 4073879 33.000000 0 183 183 NCBI RefSeq GCF_000218485.1-RS_2025_08_04 2025-08-04 3554 3406 44 21725015 GCF_000218525.1 PRJNA224116 SAMN02471008 AFHO00000000.1 na 997765 29562 Mesomycoplasma ovipneumoniae SC01 strain=SC01 na latest Contig Major Full 2011-06-15 ASM21852v2 Beijing Genome Institute GCA_000218525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/525/GCF_000218525.1_ASM21852v2/ na na na haploid bacteria 1020200 1020200 29.000000 0 37 37 NCBI RefSeq GCF_000218525.1-RS_2025_02_16 2025-02-16 750 689 35 21742877 GCF_000218545.1 PRJNA224116 SAMN02232005 na reference genome 593907 11 Cellulomonas gilvus ATCC 13127 strain=ATCC 13127 na latest Complete Genome Major Full 2011-06-15 ASM21854v1 US DOE Joint Genome Institute GCA_000218545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/545/GCF_000218545.1_ASM21854v1/ na assembly from type material na haploid bacteria 3526441 3526441 74.000000 1 1 1 NCBI RefSeq GCF_000218545.1-RS_2025_12_09 2025-12-09 3247 3172 54 na GCF_000218565.1 PRJNA224116 SAMN02603254 na reference genome 504832 40137 Afipia carboxidovorans OM5 strain=OM5 na latest Complete Genome Major Full 2011-06-15 ASM21856v1 Georg-August Universität Göttingen GCA_000218565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/565/GCF_000218565.1_ASM21856v1/ na assembly from type material na haploid bacteria 3896074 3896074 62.500000 3 3 3 NCBI RefSeq GCF_000218565.1-RS_2026_04_14 2026-04-14 3751 3669 58 7721710;9324252;10433972;14644498;21742883 GCF_000218585.1 PRJNA224116 SAMN02603268 na na 1031710 40137 Afipia carboxidovorans OM4 strain=OM4 na latest Complete Genome Major Full 2011-06-15 ASM21858v1 Georg-August-University Goettingen GCA_000218585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/585/GCF_000218585.1_ASM21858v1/ na na na haploid bacteria 3839771 3839771 62.500000 3 3 3 NCBI RefSeq GCF_000218585.1-RS_2026_05_26 2026-05-26 3704 3615 58 21742883 GCF_000218625.1 PRJNA224116 SAMN02232022 na reference genome 717231 2352 Flexistipes sinusarabici DSM 4947 strain=DSM 4947 na latest Complete Genome Major Full 2011-06-15 ASM21862v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000218625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/625/GCF_000218625.1_ASM21862v1/ na assembly from type material na haploid bacteria 2526590 2526590 38.500000 1 1 1 NCBI RefSeq GCF_000218625.1-RS_2026_05_26 2026-05-26 2408 2297 54 22180813 GCF_000218645.2 PRJNA224116 SAMN02463708 ADEE00000000.2 na 469601 76859 Fusobacterium animalis 21_1A strain=21_1A na latest Chromosome Major Full 2014-01-17 Fusobacterium_sp_21_1A_V3 Broad Institute GCA_000218645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/645/GCF_000218645.2_Fusobacterium_sp_21_1A_V3/ na na na haploid bacteria 2154007 2153807 27.000000 1 1 2 NCBI RefSeq GCF_000218645.2-RS_2026_04_15 2026-04-15 2068 1952 66 na GCF_000218655.1 PRJNA224116 SAMN02595348 ACUO00000000.1 na 457403 76859 Fusobacterium animalis 11_3_2 strain=11_3_2 na latest Scaffold Major Full 2011-06-16 Fusobacterium_sp_11_3_2_V1 Broad Institute GCA_000218655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/655/GCF_000218655.1_Fusobacterium_sp_11_3_2_V1/ na na na haploid bacteria 2721023 2702139 27.000000 0 37 81 NCBI RefSeq GCF_000218655.1-RS_2026_06_06 2026-06-06 2702 2462 66 na GCF_000218685.1 PRJNA225516 SAMN02744068 AEQB00000000.1 reference genome 578457 85982 Serpula lacrymans var. lacrymans S7.9 strain=S7.9 na latest Scaffold Major Full 2011-06-17 v1.0 US DOE Joint Genome Institute (JGI-PGF) GCA_000218685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/685/GCF_000218685.1_v1.0/ na na na haploid fungi 42797233 42400076 45.500000 0 46 434 US DOE Joint Genome Institute (JGI-PGF) Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) 2023-12-29 12908 12905 0 21764756 GCF_000218765.1 PRJNA224116 SAMN02471911 AFCE00000000.1 na 986075 296745 Caldalkalibacillus thermarum TA2.A1 strain=TA2.A1 na latest Scaffold Major Full 2011-05-26 ASM21876v1 University of Otago GCA_000218765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/765/GCF_000218765.1_ASM21876v1/ na na na haploid bacteria 2895463 2895422 47.500000 0 251 253 NCBI RefSeq GCF_000218765.1-RS_2026_03_20 2026-03-20 3112 2886 100 21685297 GCF_000218785.1 PRJNA224116 SAMN02469973 AFPO00000000.1 na 1036674 1036674 Idiomarina sp. A28L strain=A28L na latest Contig Major Full 2011-06-16 A28LD_1.0 Institute of Genomics and Integrative Biology GCA_000218785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/785/GCF_000218785.1_A28LD_1.0/ na na na haploid bacteria 2591567 2591567 45.500000 0 28 28 NCBI RefSeq GCF_000218785.1-RS_2025_08_27 2025-08-27 2343 2273 57 21742887 GCF_000218805.1 PRJNA224116 SAMN02472164 AFPT00000000.1 na 862720 862720 Paracidovorax oryzae strain=RS-1 na latest Contig Major Full 2011-06-16 ASM21880v2 Institute of Biotechnology, Zhejiang University GCA_000218805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/805/GCF_000218805.1_ASM21880v2/ na na na haploid bacteria 5522282 5522282 68.500000 0 156 156 NCBI RefSeq GCF_000218805.1-RS_2026_07_01 2026-07-01 5208 4876 48 21742879 GCF_000218855.1 PRJNA224116 SAMN02603396 na reference genome 991791 1488 Clostridium acetobutylicum DSM 1731 strain=DSM 1731 na latest Complete Genome Major Full 2011-06-17 ASM21885v1 Institute Of Microbiology Chinese Academy of Sciences GCA_000218855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/855/GCF_000218855.1_ASM21885v1/ na na na haploid bacteria 4145581 4145581 31.000000 3 3 3 NCBI RefSeq GCF_000218855.1-RS_2026_04_14 2026-04-14 3992 3847 112 21742891 GCF_000218875.1 PRJNA224116 SAMN02232067 na na 579138 542 Zymomonas mobilis subsp. pomaceae ATCC 29192 strain=ATCC 29192 na latest Complete Genome Major Full 2011-06-17 ASM21887v1 US DOE Joint Genome Institute GCA_000218875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/875/GCF_000218875.1_ASM21887v1/ na assembly from type material na haploid bacteria 2061413 2061413 44.000000 3 3 3 NCBI RefSeq GCF_000218875.1-RS_2026_04_01 2026-04-01 1835 1752 63 21742897 GCF_000218895.1 PRJNA224116 SAMN02232050 na reference genome 761193 106 Runella slithyformis DSM 19594 strain=DSM 19594 na latest Complete Genome Major Full 2011-06-17 ASM21889v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000218895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/895/GCF_000218895.1_ASM21889v1/ na assembly from type material na haploid bacteria 6919729 6919729 46.500000 6 6 6 NCBI RefSeq GCF_000218895.1-RS_2025_09_16 2025-09-16 5898 5819 51 22768358 GCF_000218915.1 PRJNA224116 SAMN02603153 na na 1036673 61624 Paenibacillus mucilaginosus KNP414 strain=KNP414 na latest Complete Genome Major Full 2011-06-17 ASM21891v1 College of Life Sciences, Zhejiang Sci-Tech University GCA_000218915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/915/GCF_000218915.1_ASM21891v1/ na na na haploid bacteria 8663821 8663821 58.500000 1 1 1 NCBI RefSeq GCF_000218915.1-RS_2026_02_02 2026-02-02 7360 7108 154 24158556 GCF_000219045.1 PRJNA224116 SAMN02603541 na reference genome 573569 573569 Francisella salina strain=TX07-7308 na latest Complete Genome Major Full 2011-06-20 ASM21904v1 Los Alamos National Laboratory GCA_000219045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/045/GCF_000219045.1_ASM21904v1/ na assembly from type material na haploid bacteria 2035931 2035931 33.000000 1 1 1 NCBI RefSeq GCF_000219045.1-RS_2025_12_13 2025-12-13 2007 1927 53 na GCF_000219085.2 PRJNA224116 SAMN02470597 na na 1010838 1764 Mycobacterium avium subsp. paratuberculosis S397 strain=S397 na latest Complete Genome Major Full 2020-12-10 ASM21908v3 USDA-ARS-National Animal Disease Center GCA_000219085.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/085/GCF_000219085.2_ASM21908v3/ na na na haploid bacteria 4895755 4895755 69.500000 1 1 1 NCBI RefSeq GCF_000219085.2-RS_2026_04_07 2026-04-07 4635 4341 53 22409516;33707341 GCF_000219105.1 PRJNA224116 SAMN02603152 na na 35 35 Corallococcus macrosporus strain=HW-1 na latest Complete Genome Major Full 2011-06-22 ASM21910v1 College of Life Science, Shandong University GCA_000219105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/105/GCF_000219105.1_ASM21910v1/ na na na haploid bacteria 9003593 9003593 70.500000 1 1 1 NCBI RefSeq GCF_000219105.1-RS_2026_02_06 2026-02-06 7415 7184 83 21868801 GCF_000219125.1 PRJNA224116 SAMN02469409 AFGF00000000.1 reference genome 1009370 2374 Acetonema longum DSM 6540 strain=DSM 6540 na latest Scaffold Major Full 2011-06-22 ASM21912v1 California Institute of Technology GCA_000219125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/125/GCF_000219125.1_ASM21912v1/ na assembly from type material na haploid bacteria 4323011 4323001 50.500000 0 296 297 NCBI RefSeq GCF_000219125.1-RS_2026_02_02 2026-02-02 4179 3970 72 21673657 GCF_000219175.1 PRJNA224116 SAMN02604229 na na 903503 1048758 Candidatus Moranella endobia PCIT strain=PCIT na latest Complete Genome Major Full 2011-06-24 ASM21917v1 University of Montana GCA_000219175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/175/GCF_000219175.1_ASM21917v1/ na na na haploid bacteria 538294 538294 43.500000 1 1 1 NCBI RefSeq GCF_000219175.1-RS_2026_03_31 2026-03-31 482 402 49 21835622 GCF_000219215.1 PRJNA224116 SAMN02603269 na reference genome 1042878 106590 Cupriavidus necator N-1 strain=N-1 na latest Complete Genome Major Full 2011-06-24 ASM21921v1 Georg-August-University Goettingen GCA_000219215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/215/GCF_000219215.1_ASM21921v1/ na assembly from type material na haploid bacteria 8480857 8480857 65.500000 4 4 4 NCBI RefSeq GCF_000219215.1-RS_2025_12_11 2025-12-11 7975 7578 88 21742890 GCF_000219235.1 PRJNA224116 SAMN02471770 AFDJ00000000.1 na 945689 2371 Xylella fastidiosa EB92.1 strain=EB92.1 na latest Contig Major Full 2011-06-24 ASM21923v2 University of Florida GCA_000219235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/235/GCF_000219235.1_ASM21923v2/ na na na haploid bacteria 2475426 2475426 51.500000 0 168 168 NCBI RefSeq GCF_000219235.1-RS_2026_05_15 2026-05-15 2333 2150 56 21914886 GCF_000219295.1 PRJNA224116 SAMN02469446 AFPR00000000.1 na 1043206 1043206 Acidiphilium sp. PM strain=PM na latest Scaffold Major Full 2011-06-24 Acry_PM_v3 PicoMicro GCA_000219295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/295/GCF_000219295.1_Acry_PM_v3/ na na na haploid bacteria 3929465 3929465 66.500000 8 627 627 NCBI RefSeq GCF_000219295.1-RS_2024_12_15 2024-12-15 4147 3816 52 21914891 GCF_000219355.1 PRJNA224116 SAMN02604106 na reference genome 696127 234827 Candidatus Midichloria mitochondrii IricVA strain=IricVA na latest Complete Genome Major Full 2011-06-27 ASM21935v1 Università degli Studi di Milano GCA_000219355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/355/GCF_000219355.1_ASM21935v1/ na na na haploid bacteria 1183732 1183732 36.500000 1 1 1 NCBI RefSeq GCF_000219355.1-RS_2026_01_08 2026-01-08 1485 1376 40 21690562 GCF_000219375.1 PRJNA224116 SAMN02603302 na na 956483 28903 Mycoplasmopsis bovis Hubei-1 strain=Hubei-1 na latest Complete Genome Major Full 2011-06-27 ASM21937v1 Harbin Veterinary Research Institute GCA_000219375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/375/GCF_000219375.1_ASM21937v1/ na na na haploid bacteria 948121 948121 29.500000 1 1 1 NCBI RefSeq GCF_000219375.1-RS_2026_02_26 2026-02-26 829 749 41 21731639 GCF_000219415.3 PRJNA224116 SAMN02469447 na na 882101 380 Sinorhizobium fredii GR64 strain=GR64 na latest Complete Genome Major Full 2023-11-01 ASM21941v3 Centro de Ciencias Genomicas. U.N.A.M. GCA_000219415.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/415/GCF_000219415.3_ASM21941v3/ na na na haploid bacteria 7045697 7045697 62.000000 4 4 4 NCBI RefSeq GCF_000219415.3-RS_2026_01_06 2026-01-06 6636 6252 67 23209231 GCF_000219455.1 PRJNA224116 SAMN02603656 na na 1035817 216816 Bifidobacterium longum subsp. longum KACC 91563 strain=KACC 91563 na latest Complete Genome Major Full 2011-06-28 ASM21945v1 National Livestock Research Institute, RDA GCA_000219455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/455/GCF_000219455.1_ASM21945v1/ na na na haploid bacteria 2395764 2395764 60.000000 3 3 3 NCBI RefSeq GCF_000219455.1-RS_2026_03_27 2026-03-27 2014 1881 68 21742881 GCF_000219515.2 PRJNA224116 SAMN02469619 na na 1001989 562 Escherichia coli PCN033 strain=PCN033 na latest Complete Genome Major Full 2015-06-08 ASM21951v3 Chinese National Human Genome Center at Shanghai GCA_000219515.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/515/GCF_000219515.2_ASM21951v3/ na na na haploid bacteria 5156873 5156873 50.500000 4 4 4 NCBI RefSeq GCF_000219515.2-RS_2025_05_21 2025-05-21 5013 4714 120 26391348 GCF_000219535.2 PRJNA224116 SAMN02469848 na na 1042163 1465 Brevibacillus laterosporus LMG 15441 strain=LMG 15441 na latest Complete Genome Major Full 2014-07-22 ASM21953v3 Georg-August-University Goettingen GCA_000219535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/535/GCF_000219535.2_ASM21953v3/ na na na haploid bacteria 5153859 5153859 41.000000 3 3 3 NCBI RefSeq GCF_000219535.2-RS_2025_04_26 2025-04-26 4668 4420 151 21914864 GCF_000219565.1 PRJNA224116 SAMN02471291 AFQW00000000.1 na 999141 999141 Halomonas sp. TD01 strain=TD01 na latest Scaffold Major Full 2011-06-29 ASM21956v1 Dept Biological Sciences and Biotechnology, MOE Key Lab. Bioinformatics (& System Biology), School of Life Sciences, Tsinghua University, Beijing, China GCA_000219565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/565/GCF_000219565.1_ASM21956v1/ na na na haploid bacteria 4091699 4049556 52.500000 0 25 116 NCBI RefSeq GCF_000219565.1-RS_2024_12_27 2024-12-27 3815 3700 66 22040376 GCF_000219585.1 PRJNA224116 SAMN02232044 na na 261292 261292 Nitrosomonas sp. Is79A3 strain=Is79A3 na latest Complete Genome Major Full 2011-06-29 ASM21958v1 DOE Joint Genome Institute GCA_000219585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/585/GCF_000219585.1_ASM21958v1/ na na na haploid bacteria 3783444 3783444 45.500000 1 1 1 NCBI RefSeq GCF_000219585.1-RS_2024_06_01 2024-06-01 3547 3423 45 na GCF_000219605.1 PRJNA224116 SAMN02603041 na na 316 316 Stutzerimonas stutzeri strain=CGMCC 1.1803 na latest Complete Genome Major Full 2011-06-29 ASM21960v1 Biotechnology Research Institute, Chinese Academy of Agricultural Sciences GCA_000219605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/605/GCF_000219605.1_ASM21960v1/ na assembly from type material na haploid bacteria 4547930 4547930 64.000000 1 1 1 NCBI RefSeq GCF_000219605.1-RS_2026_03_03 2026-03-03 4265 4105 76 21994926 GCF_000219625.1 PRJNA170847 SAMN02746078 ACPE00000000.1 reference genome 336722 1047171 Zymoseptoria tritici IPO323 strain=IPO323 na latest Chromosome Major Full 2011-07-06 MYCGR v2.0 DOE Joint Genome Institute GCA_000219625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/625/GCF_000219625.1_MYCGR_v2.0/ na assembly from type material na haploid fungi 39686251 39678910 52.000000 21 21 24 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-02-07 10942 10941 0 21695235 GCF_000219705.1 PRJNA224116 SAMN02603862 na na 1042876 303 Pseudomonas putida S16 strain=S16 na latest Complete Genome Major Full 2011-06-30 ASM21970v1 Shanghai Jiao Tong University GCA_000219705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/705/GCF_000219705.1_ASM21970v1/ na na na haploid bacteria 5984790 5984790 62.500000 1 1 1 NCBI RefSeq GCF_000219705.1-RS_2025_04_26 2025-04-26 5553 5309 91 21914868 GCF_000219725.1 PRJNA224116 SAMN02232064 na reference genome 744872 215591 Gracilinema caldarium DSM 7334 strain=DSM 7334 na latest Complete Genome Major Full 2011-06-30 ASM21972v1 DOE Joint Genome Institute GCA_000219725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/725/GCF_000219725.1_ASM21972v1/ na assembly from type material na haploid bacteria 3239340 3239340 45.500000 1 1 1 NCBI RefSeq GCF_000219725.1-RS_2026_03_03 2026-03-03 2942 2849 60 na GCF_000219745.1 PRJNA224116 SAMN02471472 AFRQ00000000.1 na 1003200 1287735 Achromobacter insuavis AXX-A strain=AXX-A na latest Scaffold Major Full 2011-07-01 ASM21974v1 Laboratory of Bacteriology - Faculty of Medecine Dijon GCA_000219745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/745/GCF_000219745.1_ASM21974v1/ na na na haploid bacteria 6860805 6707795 68.000000 0 13 160 NCBI RefSeq GCF_000219745.1-RS_2025_06_10 2025-06-10 6284 6092 63 na GCF_000219765.1 PRJNA224116 SAMN02603034 na na 1051072 1336 Streptococcus equi subsp. zooepidemicus ATCC 35246 strain=ATCC 35246 na latest Complete Genome Major Full 2011-06-30 ASM21976v1 big GCA_000219765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/765/GCF_000219765.1_ASM21976v1/ na na na haploid bacteria 2167264 2167264 41.500000 1 1 1 NCBI RefSeq GCF_000219765.1-RS_2026_03_27 2026-03-27 2062 1910 76 21914890 GCF_000219785.1 PRJNA224116 SAMN02603135 na na 979982 979982 Leuconostoc sp. C2 strain=C2 na latest Complete Genome Major Full 2011-06-30 ASM21978v1 Chung-Ang University GCA_000219785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/785/GCF_000219785.1_ASM21978v1/ na na na haploid bacteria 1877273 1877273 38.000000 1 1 1 NCBI RefSeq GCF_000219785.1-RS_2024_08_12 2024-08-12 1902 1805 82 21914872 GCF_000219805.1 PRJNA224116 SAMN02603132 na reference genome 1045854 165096 Weissella koreensis KACC 15510 strain=KACC 15510 na latest Complete Genome Major Full 2011-06-30 ASM21980v1 Chung-Ang Univ. GCA_000219805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/805/GCF_000219805.1_ASM21980v1/ na na na haploid bacteria 1441470 1441470 35.500000 2 2 2 NCBI RefSeq GCF_000219805.1-RS_2026_04_14 2026-04-14 1423 1341 73 21914863 GCF_000219875.1 PRJNA224116 SAMN02603470 na na 1048834 405212 Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 strain=Tc-4-1 na latest Complete Genome Major Full 2011-07-05 ASM21987v1 Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, Chinese Academy of Sciences GCA_000219875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/875/GCF_000219875.1_ASM21987v1/ na na na haploid bacteria 3124048 3124048 61.500000 1 1 1 NCBI RefSeq GCF_000219875.1-RS_2025_09_18 2025-09-18 3180 2996 85 21914900 GCF_000219895.1 PRJNA224116 SAMN02470266 ABLB00000000.1 na 486623 1392 Bacillus anthracis str. A0389 strain=A0389 na latest Contig Major Full 2008-03-17 ASM21989v1 Los Alamos National Laboratory GCA_000219895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/895/GCF_000219895.1_ASM21989v1/ na na na haploid bacteria 5420403 5420403 35.000000 2 68 68 NCBI RefSeq GCF_000219895.1-RS_2026_02_16 2026-02-16 5697 5156 127 na GCF_000219915.2 PRJNA224116 SAMN01940915 na reference genome 1036672 310575 Advenella kashmirensis WT001 strain=WT001 na latest Complete Genome Major Full 2012-05-25 ASM21991v3 Bose Institute GCA_000219915.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/915/GCF_000219915.2_ASM21991v3/ na assembly from type material na haploid bacteria 4423879 4423879 55.000000 2 2 2 NCBI RefSeq GCF_000219915.2-RS_2025_12_09 2025-12-09 4470 3580 51 21914874;23741407 GCF_000219945.1 PRJNA224116 SAMN02469846 AFQK00000000.1 na 1037890 573 Klebsiella pneumoniae JH1 strain=JH1 na latest Contig Major Full 2011-07-05 ASM21994v2 GlaxoSmithKline GCA_000219945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/945/GCF_000219945.1_ASM21994v2/ na na na haploid bacteria 5534249 5534249 57.000000 0 118 118 NCBI RefSeq GCF_000219945.1-RS_2025_01_05 2025-01-05 5515 5293 83 21746949 GCF_000219965.1 PRJNA224116 SAMN02469847 AFQL00000000.1 na 1037908 573 Klebsiella pneumoniae 1162281 strain=1162281 na latest Contig Major Full 2011-07-05 ASM21996v2 GlaxoSmithKline GCA_000219965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/219/965/GCF_000219965.1_ASM21996v2/ na na na haploid bacteria 5535020 5535020 57.500000 0 116 116 NCBI RefSeq GCF_000219965.1-RS_2025_01_05 2025-01-05 5463 5254 79 21746949 GCF_000220005.1 PRJNA224116 SAMN02471895 AGTD00000000.1 na 1050617 562 Escherichia coli UMNF18 strain=UMNF18 na latest Complete Genome Major Full 2011-11-01 ASM22000v2 University of Minnesota GCA_000220005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/005/GCF_000220005.1_ASM22000v2/ na na na haploid bacteria 5635305 5635305 50.500000 6 6 6 NCBI RefSeq GCF_000220005.1-RS_2025_04_26 2025-04-26 5801 5312 135 22081385 GCF_000220025.3 PRJNA224116 SAMN02471202 AFNF00000000.1 na 1000561 287 Pseudomonas aeruginosa AES-1R strain=AES-1R na latest Contig Major Full 2011-07-06 ASM22002v4 Bacterial Pathogens in CF group, Sydney Medical School, The University of Sydney Sydney Australia 2006 GCA_000220025.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/025/GCF_000220025.3_ASM22002v4/ na na na haploid bacteria 6267620 6267620 66.500000 0 1783 1783 NCBI RefSeq GCF_000220025.3-RS_2025_09_12 2025-09-12 7242 6370 51 21935417 GCF_000220045.1 PRJNA224116 SAMN00621702 AFQT00000000.1 na 1008452 28037 Streptococcus mitis SK1073 strain=SK1073 na latest Contig Major Full 2011-07-06 ASM22004v2 J. Craig Venter Institute GCA_000220045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/045/GCF_000220045.1_ASM22004v2/ na na na haploid bacteria 2114708 2114708 40.000000 0 54 54 NCBI RefSeq GCF_000220045.1-RS_2026_03_16 2026-03-16 2073 1904 74 na GCF_000220065.1 PRJNA224116 SAMN00115115 AFQU00000000.1 na 904294 712620 Streptococcus sp. oral taxon 056 str. F0418 strain=F0418 na latest Contig Major Full 2011-07-06 ASM22006v1 J. Craig Venter Institute GCA_000220065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/065/GCF_000220065.1_ASM22006v1/ na na na haploid bacteria 1943250 1943250 39.500000 0 1 1 NCBI RefSeq GCF_000220065.1-RS_2025_08_18 2025-08-18 1945 1720 71 na GCF_000220085.1 PRJNA224116 SAMN00621705 AFQV00000000.1 na 1008453 28037 Streptococcus mitis SK1080 strain=SK1080 na latest Contig Major Full 2011-07-06 ASM22008v2 J. Craig Venter Institute GCA_000220085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/085/GCF_000220085.1_ASM22008v2/ na na na haploid bacteria 1943752 1943752 40.500000 0 34 34 NCBI RefSeq GCF_000220085.1-RS_2026_03_16 2026-03-16 1937 1740 97 na GCF_000220105.1 PRJNA224116 SAMN00011086 na na 887712 813 Chlamydia trachomatis L2c strain=L2c na latest Complete Genome Major Full 2011-07-06 ASM22010v1 Emory University GCA_000220105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/105/GCF_000220105.1_ASM22010v1/ na na na haploid bacteria 1038313 1038313 41.500000 1 1 1 NCBI RefSeq GCF_000220105.1-RS_2025_02_25 2025-02-25 948 879 46 21540364 GCF_000220135.1 PRJNA224116 SAMN02604112 na na 326426 1685 Bifidobacterium breve UCC2003 strain=UCC2003 na latest Complete Genome Major Full 2011-07-06 ASM22013v1 University College Cork GCA_000220135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/135/GCF_000220135.1_ASM22013v1/ na na na haploid bacteria 2422684 2422684 58.500000 1 1 1 NCBI RefSeq GCF_000220135.1-RS_2026_01_13 2026-01-13 2093 1934 63 21690406 GCF_000220155.1 PRJNA224116 SAMN02471207 AFSL00000000.1 reference genome 385682 385682 Thermophagus xiamenensis strain=HS1 na latest Contig Major Full 2011-07-06 ASM22015v2 Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration GCA_000220155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/155/GCF_000220155.1_ASM22015v2/ na assembly from type material na haploid bacteria 3863529 3863529 39.000000 0 114 114 NCBI RefSeq GCF_000220155.1-RS_2025_09_14 2025-09-14 2964 2898 49 21914884 GCF_000220175.1 PRJNA224116 SAMN02470178 AFPU00000000.1 reference genome 1001994 1088740 Nitrosarchaeum koreense MY1 strain=MY1 na latest Contig Major Full 2011-07-07 ASM22017v1 Korea Research Institute of Bioscience and Biotechnology GCA_000220175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/175/GCF_000220175.1_ASM22017v1/ na assembly from type material na haploid archaea 1607695 1607695 32.500000 0 1 1 NCBI RefSeq GCF_000220175.1-RS_2026_03_30 2026-03-30 1947 1896 49 21914867;35773279 GCF_000220215.1 PRJNA224116 SAMN00262626 AFPW00000000.1 na 908937 52227 Prevotella dentalis DSM 3688 strain=ATCC 49559 na latest Scaffold Major Full 2011-07-08 ASM22021v1 Baylor College of Medicine GCA_000220215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/215/GCF_000220215.1_ASM22021v1/ na assembly from type material na haploid bacteria 3286469 3240350 56.000000 0 25 73 NCBI RefSeq GCF_000220215.1-RS_2025_12_23 2025-12-23 2573 2454 59 na GCF_000220235.1 PRJNA224116 SAMN00262639 AFPX00000000.1 na 997352 28133 Prevotella nigrescens ATCC 33563 strain=ATCC 33563 na latest Scaffold Major Full 2011-07-08 ASM22023v1 Baylor College of Medicine GCA_000220235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/235/GCF_000220235.1_ASM22023v1/ na assembly from type material na haploid bacteria 2669193 2612230 42.500000 0 24 86 NCBI RefSeq GCF_000220235.1-RS_2026_01_08 2026-01-08 2206 2093 50 na GCF_000220255.1 PRJNA224116 SAMN00262640 AFPY00000000.1 na 997353 60133 Prevotella pallens ATCC 700821 strain=ATCC 700821 na latest Scaffold Major Full 2011-07-08 ASM22025v1 Baylor College of Medicine GCA_000220255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/255/GCF_000220255.1_ASM22025v1/ na assembly from type material na haploid bacteria 3127600 3047417 37.500000 0 40 168 NCBI RefSeq GCF_000220255.1-RS_2025_08_21 2025-08-21 2559 2402 49 na GCF_000220275.1 PRJNA224116 SAMN00253970 AFQB00000000.1 na 888814 1305 Streptococcus sanguinis SK340 strain=CCUG 59323 na latest Scaffold Major Full 2011-07-08 ASM22027v1 Baylor College of Medicine GCA_000220275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/275/GCF_000220275.1_ASM22027v1/ na na na haploid bacteria 2408728 2397186 43.000000 0 4 14 NCBI RefSeq GCF_000220275.1-RS_2026_01_27 2026-01-27 2359 2276 40 na GCF_000220315.1 PRJNA224116 SAMN00262642 AFQA00000000.1 na 997356 1305 Streptococcus sanguinis ATCC 29667 strain=ATCC 29667 na latest Scaffold Major Full 2011-07-08 ASM22031v1 Baylor College of Medicine GCA_000220315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/315/GCF_000220315.1_ASM22031v1/ na na na haploid bacteria 2429348 2427335 43.000000 0 10 34 NCBI RefSeq GCF_000220315.1-RS_2025_07_15 2025-07-15 2386 2286 41 na GCF_000220335.1 PRJNA224116 SAMN00262641 AFPZ00000000.1 na 1027292 759851 Sporosarcina newyorkensis 2681 strain=2681 na latest Scaffold Major Full 2011-07-08 ASM22033v1 Baylor College of Medicine GCA_000220335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/335/GCF_000220335.1_ASM22033v1/ na na na haploid bacteria 3727356 3627224 42.000000 0 42 162 NCBI RefSeq GCF_000220335.1-RS_2025_07_08 2025-07-08 3700 3558 70 na GCF_000220415.1 PRJNA224116 SAMN02472040 AEGB00000000.1 na 882098 1773 Mycobacterium tuberculosis S96-129 strain=S96-129 na latest Chromosome Major Full 2011-07-12 ASM22041v1 Uppsala University, dep. of Medical Biochemistry and Microbiology GCA_000220415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/415/GCF_000220415.1_ASM22041v1/ na na na haploid bacteria 4342996 4323196 65.500000 1 1 199 NCBI RefSeq GCF_000220415.1-RS_2025_05_23 2025-05-23 4301 3977 51 21304944 GCF_000220435.1 PRJNA224116 SAMN02472041 AEGC00000000.1 na 882099 1773 Mycobacterium tuberculosis BTB05-552 strain=BTB05-552 na latest Chromosome Major Full 2011-07-12 ASM22043v1 Uppsala University, dep. of Medical Biochemistry and Microbiology GCA_000220435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/435/GCF_000220435.1_ASM22043v1/ na na na haploid bacteria 4364777 4349677 65.500000 1 1 152 NCBI RefSeq GCF_000220435.1-RS_2025_05_23 2025-05-23 4276 3973 51 21304944 GCF_000220455.1 PRJNA224116 SAMN02472033 AEGD00000000.1 na 882100 1773 Mycobacterium tuberculosis BTB05-559 strain=BTB05-559 na latest Chromosome Major Full 2011-07-12 ASM22045v1 Uppsala University, dep. of Medical Biochemistry and Microbiology GCA_000220455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/455/GCF_000220455.1_ASM22045v1/ na na na haploid bacteria 4342459 4331259 65.500000 1 1 113 NCBI RefSeq GCF_000220455.1-RS_2025_05_22 2025-05-22 4239 3957 51 21304944 GCF_000220485.1 PRJNA224116 SAMN02603582 na na 1049565 573 Klebsiella pneumoniae KCTC 2242 strain=KCTC 2242 na latest Complete Genome Major Full 2011-07-12 ASM22048v1 Macrogen Inc. GCA_000220485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/485/GCF_000220485.1_ASM22048v1/ na na na haploid bacteria 5462423 5462423 57.500000 2 2 2 NCBI RefSeq GCF_000220485.1-RS_2025_01_05 2025-01-05 5337 5059 125 22535926 GCF_000220505.1 PRJNA224116 SAMN02470156 AFPJ00000000.1 na 1042377 260552 Microbulbifer agarilyticus S89 strain=S89 na latest Contig Major Full 2011-07-12 ASM22050v2 Korea Ocean Research and Development Institute GCA_000220505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/505/GCF_000220505.1_ASM22050v2/ na na na haploid bacteria 3862761 3862761 57.000000 0 57 57 NCBI RefSeq GCF_000220505.1-RS_2025_08_18 2025-08-18 3246 3184 51 21914866 GCF_000220525.1 PRJNA224116 SAMN02470154 AFPK00000000.1 reference genome 1042376 1042376 Ochrovirga pacifica strain=S85 na latest Contig Major Full 2011-07-12 ASM22052v2 Korea Ocean Research and Development Institute GCA_000220525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/525/GCF_000220525.1_ASM22052v2/ na assembly from type material na haploid bacteria 3384629 3384629 34.000000 0 77 77 NCBI RefSeq GCF_000220525.1-RS_2025_11_21 2025-11-21 2896 2829 56 21994933 GCF_000220545.1 PRJNA224116 SAMN02470153 AFPL00000000.1 na 1042375 49186 Marinobacterium stanieri S30 strain=S30 na latest Contig Major Full 2011-07-12 ASM22054v2 Korea Ocean Research & Development Institute GCA_000220545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/545/GCF_000220545.1_ASM22054v2/ na na na haploid bacteria 4370691 4370691 56.000000 0 58 58 NCBI RefSeq GCF_000220545.1-RS_2026_03_20 2026-03-20 4128 4033 72 22328757 GCF_000220565.1 PRJNA224116 SAMN02470155 AFPM00000000.1 na 1042378 1042378 Oceanicola sp. S124 strain=S124 na latest Contig Major Full 2011-07-12 ASM22056v2 Korea Ocean Research and Development Institute GCA_000220565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/565/GCF_000220565.1_ASM22056v2/ na na na haploid bacteria 4649474 4649474 67.500000 0 339 339 NCBI RefSeq GCF_000220565.1-RS_2025_08_27 2025-08-27 4593 4395 48 23105065 GCF_000220585.1 PRJNA224116 SAMN02470158 AFOE00000000.1 na 1929488 1929488 Croceivirga radicis strain=S86 na latest Contig Major Full 2011-07-13 ASM22058v2 Korea Ocean Research and Development Institute GCA_000220585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/585/GCF_000220585.1_ASM22058v2/ na na na haploid bacteria 3704661 3704661 37.000000 0 61 61 NCBI RefSeq GCF_000220585.1-RS_2025_12_02 2025-12-02 3268 3202 44 21914876 GCF_000220625.1 PRJNA224116 SAMN02603043 na na 860228 28188 Capnocytophaga canimorsus Cc5 strain=Cc5 na latest Complete Genome Major Full 2011-07-14 ASM22062v1 BIOZENTRUM, Basel university, Switzerland GCA_000220625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/625/GCF_000220625.1_ASM22062v1/ na na na haploid bacteria 2571406 2571406 36.000000 1 1 1 NCBI RefSeq GCF_000220625.1-RS_2024_09_05 2024-09-05 2293 2203 58 21762219;21914877 GCF_000220645.1 PRJNA224116 SAMN02603718 na na 1053692 39152 Methanococcus maripaludis X1 strain=X1 na latest Complete Genome Major Full 2011-07-14 ASM22064v1 Ecosystem Sciences, Commonwealth Scientific and Industrial Research Organisation GCA_000220645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/645/GCF_000220645.1_ASM22064v1/ na na na haploid archaea 1746697 1746697 33.000000 1 1 1 NCBI RefSeq GCF_000220645.1-RS_2025_11_20 2025-11-20 1913 1847 47 21914896 GCF_000220705.2 PRJNA224116 SAMN02469701 na reference genome 1038929 1038928 Streptomyces xinghaiensis S187 strain=S187 na latest Complete Genome Major Full 2017-09-12 ASM22070v2 School of Life Science and Biotechnology, Dalian University of Technology GCA_000220705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/705/GCF_000220705.2_ASM22070v2/ na assembly from type material na haploid bacteria 7137891 7137891 73.000000 1 1 1 NCBI RefSeq GCF_000220705.2-RS_2026_03_21 2026-03-21 6167 5943 85 21914869 GCF_000220725.1 PRJNA224116 SAMN02435827 AFOM00000000.1 na 991935 666 Vibrio cholerae HC-49A2 strain=HC-49A2 na latest Contig Major Full 2011-07-15 ASM22072v2 Institute for Genome Sciences GCA_000220725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/725/GCF_000220725.1_ASM22072v2/ na na na haploid bacteria 4059369 4059369 47.500000 0 23 23 NCBI RefSeq GCF_000220725.1-RS_2026_06_25 2026-06-25 3732 3561 114 na GCF_000220745.2 PRJNA224116 SAMN02435828 AFOO00000000.1 na 991930 666 Vibrio cholerae HCUF01 strain=HCUF01 na latest Contig Minor Full 2011-07-15 ASM22074v3 Institute for Genome Sciences GCA_000220745.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/745/GCF_000220745.2_ASM22074v3/ na na na haploid bacteria 4067550 4067550 47.500000 0 22 22 NCBI RefSeq GCF_000220745.2-RS_2025_07_24 2025-07-24 3746 3564 117 na GCF_000220765.2 PRJNA224116 SAMN00222985 AFOQ00000000.1 na 991945 666 Vibrio cholerae HE39 strain=HE39 na latest Contig Minor Full 2011-07-15 ASM22076v3 Institute for Genome Sciences GCA_000220765.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/765/GCF_000220765.2_ASM22076v3/ na na na haploid bacteria 3937798 3937798 47.500000 0 16 16 NCBI RefSeq GCF_000220765.2-RS_2025_07_24 2025-07-24 3591 3389 119 na GCF_000220785.1 PRJNA224116 SAMN00222980 AFOR00000000.1 na 991947 666 Vibrio cholerae HE48 strain=HE48 na latest Contig Major Full 2011-07-15 ASM22078v2 Institute for Genome Sciences GCA_000220785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/785/GCF_000220785.1_ASM22078v2/ na na na haploid bacteria 4179415 4179415 47.500000 0 18 18 NCBI RefSeq GCF_000220785.1-RS_2025_07_30 2025-07-30 3859 3590 131 na GCF_000220835.1 PRJNA224116 SAMN02299443 AFQC00000000.1 na 888056 712124 Actinomyces sp. oral taxon 448 str. F0400 strain=F0400 na latest Scaffold Major Full 2011-07-18 ASM22083v1 Baylor College of Medicine GCA_000220835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/835/GCF_000220835.1_ASM22083v1/ na na na haploid bacteria 2828172 2801370 69.500000 0 12 69 NCBI RefSeq GCF_000220835.1-RS_2025_08_18 2025-08-18 2459 2344 56 na GCF_000220865.1 PRJNA224116 SAMN02299447 AFQE00000000.1 na 997348 496 Neisseria macacae ATCC 33926 strain=ATCC 33926 na latest Scaffold Major Full 2011-07-18 ASM22086v1 Baylor College of Medicine GCA_000220865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/865/GCF_000220865.1_ASM22086v1/ na assembly from type material na haploid bacteria 2748368 2684269 51.000000 0 66 198 NCBI RefSeq GCF_000220865.1-RS_2025_07_13 2025-07-13 2618 2429 63 na GCF_000220885.1 PRJNA224116 SAMN02604350 na na 1042403 28025 Bifidobacterium animalis subsp. lactis CNCM I-2494 strain=CNCM I-2494 na latest Complete Genome Major Full 2011-07-18 ASM22088v1 Washington University School of Medicine Center for Genome Sciences and Systems Biology GCA_000220885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/885/GCF_000220885.1_ASM22088v1/ na na na haploid bacteria 1943113 1943113 60.500000 1 1 1 NCBI RefSeq GCF_000220885.1-RS_2026_03_20 2026-03-20 1626 1539 67 21914878 GCF_000220945.1 PRJNA224116 SAMN02604164 na reference genome 713604 33910 Amycolatopsis mediterranei S699 strain=S699 na latest Complete Genome Major Full 2011-07-19 ASM22094v1 University of Delhi GCA_000220945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/945/GCF_000220945.1_ASM22094v1/ na assembly from type material na haploid bacteria 10236779 10236779 71.500000 1 1 1 NCBI RefSeq GCF_000220945.1-RS_2026_03_27 2026-03-27 9667 9479 69 21914879 GCF_000220985.1 PRJNA224116 SAMN02470081 AFRW00000000.1 na 795955 795955 Nesterenkonia sp. F strain=F na latest Contig Major Full 2011-07-19 ASM22098v2 Iranian Biological Resource Center GCA_000220985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/220/985/GCF_000220985.1_ASM22098v2/ na na na haploid bacteria 2812133 2812133 71.500000 0 138 138 NCBI RefSeq GCF_000220985.1-RS_2024_08_13 2024-08-13 2582 2431 53 21914888 GCF_000221005.1 PRJNA224116 SAMN02603341 na na 520461 120576 Brucella pinnipedialis B2/94 strain=B2/94 na latest Complete Genome Major Full 2011-07-20 ASM22100v1 INRA GCA_000221005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/005/GCF_000221005.1_ASM22100v1/ na na na haploid bacteria 3399268 3399268 57.000000 2 2 2 NCBI RefSeq GCF_000221005.1-RS_2025_06_09 2025-06-09 3326 3105 68 21745361 GCF_000221025.1 PRJNA224116 SAMN02603220 na reference genome 990288 33059 Acidithiobacillus caldus SM-1 strain=SM-1 na latest Complete Genome Major Full 2011-07-20 ASM22102v1 Environmental Microbiology Research Center (EMRC) GCA_000221025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/025/GCF_000221025.1_ASM22102v1/ na na na haploid bacteria 3237599 3237599 61.000000 5 5 5 NCBI RefSeq GCF_000221025.1-RS_2026_03_31 2026-03-31 3270 3135 57 21703548 GCF_000221045.1 PRJNA224116 SAMN02603677 na na 1005048 158899 Collimonas fungivorans Ter331 strain=Ter331 na latest Complete Genome Major Full 2011-07-20 ASM22104v1 Netherlands Institute of Ecology (NIOO-KNAW) GCA_000221045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/045/GCF_000221045.1_ASM22104v1/ na na na haploid bacteria 5186898 5186898 59.500000 1 1 1 NCBI RefSeq GCF_000221045.1-RS_2025_04_26 2025-04-26 4747 4623 65 15305924;16457898;18671744;19638176;21614084 GCF_000221125.1 PRJNA224116 SAMN00015391 AFUM00000000.1 na 679193 1747 Cutibacterium acnes SK182 strain=SK182 na latest Contig Major Full 2011-07-21 ASM22112v2 JCVI GCA_000221125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/125/GCF_000221125.1_ASM22112v2/ na na na haploid bacteria 2477348 2477348 60.000000 0 14 14 NCBI RefSeq GCF_000221125.1-RS_2026_04_20 2026-04-20 2446 2320 54 na GCF_000221145.1 PRJNA224116 SAMN02299458 AFUN00000000.1 na 1051006 1574624 [Propionibacterium] namnetense SK182B-JCVI strain=SK182B-JCVI na latest Contig Major Full 2011-07-21 ASM22114v2 J. Craig Venter Institute GCA_000221145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/145/GCF_000221145.1_ASM22114v2/ na na na haploid bacteria 2430672 2430672 60.000000 0 50 50 NCBI RefSeq GCF_000221145.1-RS_2025_07_30 2025-07-30 2296 2103 58 na GCF_000221165.1 PRJNA224116 SAMN02415617 AFUO00000000.1 na 768726 1303 Streptococcus mitis bv. 2 str. F0392 strain=F0392 na latest Contig Major Full 2011-07-21 ASM22116v2 J. Craig Venter Institute GCA_000221165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/165/GCF_000221165.1_ASM22116v2/ na na na haploid bacteria 1916998 1916998 41.000000 0 2 2 NCBI RefSeq GCF_000221165.1-RS_2025_04_14 2025-04-14 1932 1813 77 na GCF_000221185.1 PRJNA224116 SAMN02603471 na na 1042877 1042877 Thermococcus sp. 4557 strain=4557 na latest Complete Genome Major Full 2011-07-22 ASM22118v1 Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA),PR China GCA_000221185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/185/GCF_000221185.1_ASM22118v1/ na na na haploid archaea 2011320 2011320 56.000000 1 1 1 NCBI RefSeq GCF_000221185.1-RS_2024_10_21 2024-10-21 2176 2117 52 21914870 GCF_000221205.1 PRJNA224116 SAMN02602971 na na 1032845 781 Rickettsia conorii subsp. heilongjiangensis 054 strain=054 na latest Complete Genome Major Full 2011-07-22 ASM22120v1 Academy of Military Medical Sciences, The Institute of Microbiology and Epidemiology, China GCA_000221205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/205/GCF_000221205.1_ASM22120v1/ na assembly from type material na haploid bacteria 1278471 1278471 32.500000 1 1 1 NCBI RefSeq GCF_000221205.1-RS_2026_01_08 2026-01-08 1462 1293 40 21914880 GCF_000221225.1 PRJNA225505 SAMN02981263 ADUW00000000.1 reference genome 759272 209285 Thermochaetoides thermophila DSM 1495 strain=DSM 1495 na latest Scaffold Major Full 2011-07-22 CTHT_3.0 EMBL GCA_000221225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/225/GCF_000221225.1_CTHT_3.0/ na assembly from type material na haploid fungi 28322806 28312548 52.500000 0 21 112 EMBL Annotation submitted by EMBL 2024-12-02 7473 7164 241 21784248 GCF_000221305.1 PRJNA224116 SAMN02469901 AFVJ00000000.1 na 1034808 171279 Mycoplasmopsis anatis 1340 strain=1340 na latest Contig Major Full 2011-07-25 ASM22130v1 Huazhong Agricultural Uni GCA_000221305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/305/GCF_000221305.1_ASM22130v1/ na assembly from type material na haploid bacteria 928687 928687 26.500000 0 44 44 NCBI RefSeq GCF_000221305.1-RS_2026_02_27 2026-02-27 831 780 42 21952548 GCF_000221325.1 PRJNA224116 SAMN02428925 AEXT00000000.1 na 876138 1311 Streptococcus agalactiae FSL S3-026 strain=FSL S3-026 na latest Contig Major Full 2011-07-25 ASM22132v2 Population Medicine and Diagnostic Sciences, Cornell University GCA_000221325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/325/GCF_000221325.1_ASM22132v2/ na na na haploid bacteria 2455848 2455848 36.000000 0 8 8 NCBI RefSeq GCF_000221325.1-RS_2025_07_15 2025-07-15 2440 2191 92 21536150 GCF_000221345.1 PRJNA224116 SAMN00222983 AFOK00000000.1 na 991961 666 Vibrio cholerae HC-40A1 strain=HC-40A1 na latest Scaffold Major Full 2011-07-29 ASM22134v1 Institute for Genome Sciences GCA_000221345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/345/GCF_000221345.1_ASM22134v1/ na na na haploid bacteria 4031783 4030287 47.500000 0 203 244 NCBI RefSeq GCF_000221345.1-RS_2026_01_01 2026-01-01 3715 3558 89 na GCF_000221365.1 PRJNA224116 SAMN00249596 AFOL00000000.1 na 991965 666 Vibrio cholerae HC-48A1 strain=HC-48A1 na latest Scaffold Major Full 2011-07-29 ASM22136v1 Institute for Genome Sciences GCA_000221365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/365/GCF_000221365.1_ASM22136v1/ na na na haploid bacteria 4032180 4030824 47.500000 0 208 240 NCBI RefSeq GCF_000221365.1-RS_2026_06_24 2026-06-24 3704 3555 81 na GCF_000221385.1 PRJNA224116 SAMN00249594 AFON00000000.1 na 991984 666 Vibrio cholerae HC-70A1 strain=HC-70A1 na latest Scaffold Major Full 2011-07-29 ASM22138v1 Institute for Genome Sciences GCA_000221385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/385/GCF_000221385.1_ASM22138v1/ na na na haploid bacteria 4057434 4056521 47.500000 0 169 187 NCBI RefSeq GCF_000221385.1-RS_2026_05_29 2026-05-29 3714 3578 83 na GCF_000221405.1 PRJNA224116 SAMN02435807 AFOP00000000.1 na 2867486 650003 Vibrio paracholerae HE-09 strain=HE-09 na latest Scaffold Major Full 2011-07-29 ASM22140v1 Institute for Genome Sciences GCA_000221405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/405/GCF_000221405.1_ASM22140v1/ na na na haploid bacteria 3826131 3823808 47.500000 0 223 258 NCBI RefSeq GCF_000221405.1-RS_2026_01_10 2026-01-10 3523 3348 95 na GCF_000221425.1 PRJNA224116 SAMN00249595 AFOS00000000.1 na 991989 666 Vibrio cholerae HFU-02 strain=HFU-02 na latest Scaffold Major Full 2011-07-29 ASM22142v1 Institute for Genome Sciences GCA_000221425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/425/GCF_000221425.1_ASM22142v1/ na na na haploid bacteria 4032845 4031068 47.500000 0 110 144 NCBI RefSeq GCF_000221425.1-RS_2026_05_30 2026-05-30 3705 3558 94 na GCF_000221445.1 PRJNA224116 SAMN00249590 AFOT00000000.1 na 991948 666 Vibrio cholerae HC-02A1 strain=HC-02A1 na latest Scaffold Major Full 2011-07-29 ASM22144v1 Institute for Genome Sciences GCA_000221445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/445/GCF_000221445.1_ASM22144v1/ na na na haploid bacteria 3949552 3947804 48.000000 0 168 206 NCBI RefSeq GCF_000221445.1-RS_2026_01_10 2026-01-10 3651 3462 98 na GCF_000221465.1 PRJNA224116 SAMN00222974 AFOU00000000.1 na 991997 666 Vibrio cholerae BJG-01 strain=BJG-01 na latest Scaffold Major Full 2011-07-29 ASM22146v1 Institute for Genome Sciences GCA_000221465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/465/GCF_000221465.1_ASM22146v1/ na na na haploid bacteria 3910867 3906300 47.500000 0 238 311 NCBI RefSeq GCF_000221465.1-RS_2026_01_10 2026-01-10 3642 3479 93 na GCF_000221485.1 PRJNA224116 SAMN00249593 AFOV00000000.1 na 991959 666 Vibrio cholerae HC-38A1 strain=HC-38A1 na latest Scaffold Major Full 2011-07-29 ASM22148v1 Institute for Genome Sciences GCA_000221485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/485/GCF_000221485.1_ASM22148v1/ na na na haploid bacteria 4036059 4034278 47.500000 0 135 165 NCBI RefSeq GCF_000221485.1-RS_2026_05_03 2026-05-03 3694 3561 84 na GCF_000221505.1 PRJNA224116 SAMN00195308 AFTL00000000.1 na 944562 1632 Limosilactobacillus oris F0423 strain=F0423 na latest Contig Major Full 2011-07-25 ASM22150v2 J. Craig Venter Institute GCA_000221505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/505/GCF_000221505.1_ASM22150v2/ na na na haploid bacteria 2174937 2174937 49.500000 0 20 20 NCBI RefSeq GCF_000221505.1-RS_2025_12_07 2025-12-07 2143 1996 89 na GCF_000221525.1 PRJNA224116 SAMN00116853 AFTX00000000.1 na 904334 29388 Staphylococcus capitis VCU116 strain=VCU116 na latest Contig Major Full 2011-07-25 ASM22152v2 J. Craig Venter Institute GCA_000221525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/525/GCF_000221525.1_ASM22152v2/ na na na haploid bacteria 2452574 2452574 33.000000 0 38 38 NCBI RefSeq GCF_000221525.1-RS_2025_07_30 2025-07-30 2440 2321 64 na GCF_000221545.1 PRJNA224116 SAMN00255226 AFUG00000000.1 na 1000569 1000569 Megasphaera sp. UPII 135-E strain=UPII 135-E na latest Contig Major Full 2011-07-25 ASM22154v1 J. Craig Venter Institute GCA_000221545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/545/GCF_000221545.1_ASM22154v1/ na na na haploid bacteria 1650551 1650551 39.000000 0 49 49 NCBI RefSeq GCF_000221545.1-RS_2024_08_12 2024-08-12 1554 1457 56 na GCF_000221585.1 PRJNA224116 SAMN00031758 AFUI00000000.1 na 866779 1260 Finegoldia magna SY403409CC001050417 strain=SY403409CC001050417 na latest Contig Major Full 2011-07-25 ASM22158v2 J. Craig Venter Institute GCA_000221585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/585/GCF_000221585.1_ASM22158v2/ na na na haploid bacteria 2032717 2032717 32.000000 0 39 39 NCBI RefSeq GCF_000221585.1-RS_2025_08_18 2025-08-18 2018 1882 67 na GCF_000221605.1 PRJNA224116 SAMN00195310 AFUJ00000000.1 na 944564 671229 Veillonella sp. oral taxon 780 str. F0422 strain=F0422 na latest Contig Major Full 2011-07-25 ASM22160v1 J. Craig Venter Institute GCA_000221605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/605/GCF_000221605.1_ASM22160v1/ na na na haploid bacteria 1731014 1731014 39.500000 0 75 75 NCBI RefSeq GCF_000221605.1-RS_2024_08_12 2024-08-12 1661 1524 66 na GCF_000221625.1 PRJNA224116 SAMN02603741 na na 935298 1719 Corynebacterium pseudotuberculosis PAT10 strain=PAT10 na latest Complete Genome Major Full 2011-07-27 ASM22162v1 Rede Paraense de Genômica e Proteômica GCA_000221625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/625/GCF_000221625.1_ASM22162v1/ na na na haploid bacteria 2335323 2335323 52.000000 1 1 1 NCBI RefSeq GCF_000221625.1-RS_2025_08_18 2025-08-18 2127 1985 62 22038974 GCF_000221645.1 PRJNA224116 SAMN02603869 na na 1034836 1390 Bacillus amyloliquefaciens XH7 strain=XH7 na latest Complete Genome Major Full 2011-07-27 ASM22164v1 south china university of technology GCA_000221645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/645/GCF_000221645.1_ASM22164v1/ na na na haploid bacteria 3939203 3939203 46.000000 1 1 1 NCBI RefSeq GCF_000221645.1-RS_2025_08_18 2025-08-18 4094 3879 101 21914895 GCF_000221665.1 PRJNA224116 SAMN00116832 AFUA00000000.1 na 904330 1282 Staphylococcus epidermidis VCU109 strain=VCU109 na latest Contig Major Full 2011-07-26 ASM22166v2 J. Craig Venter Institute GCA_000221665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/665/GCF_000221665.1_ASM22166v2/ na na na haploid bacteria 2390499 2390499 32.000000 0 56 56 NCBI RefSeq GCF_000221665.1-RS_2025_07_30 2025-07-30 2330 2181 66 na GCF_000221685.1 PRJNA224116 SAMN00116831 AFTZ00000000.1 na 904328 1282 Staphylococcus epidermidis VCU105 strain=VCU105 na latest Contig Major Full 2011-07-26 ASM22168v2 J. Craig Venter Institute GCA_000221685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/685/GCF_000221685.1_ASM22168v2/ na na na haploid bacteria 2300610 2300610 32.000000 0 30 30 NCBI RefSeq GCF_000221685.1-RS_2025_07_30 2025-07-30 2220 2076 68 na GCF_000221705.1 PRJNA224116 SAMN00116868 AFTY00000000.1 na 904319 1282 Staphylococcus epidermidis VCU037 strain=VCU037 na latest Contig Major Full 2011-07-26 ASM22170v2 J. Craig Venter Institute GCA_000221705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/705/GCF_000221705.1_ASM22170v2/ na na na haploid bacteria 2449041 2449041 32.000000 0 44 44 NCBI RefSeq GCF_000221705.1-RS_2025_07_30 2025-07-30 2353 2215 68 na GCF_000221725.1 PRJNA224116 SAMN00116863 AFTQ00000000.1 na 904738 1280 Staphylococcus aureus subsp. aureus 21235 strain=21235 na latest Contig Major Full 2011-07-27 ASM22172v2 J. Craig Venter Institute GCA_000221725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/725/GCF_000221725.1_ASM22172v2/ na na na haploid bacteria 2797424 2797424 33.000000 0 79 79 NCBI RefSeq GCF_000221725.1-RS_2025_08_16 2025-08-16 2875 2619 64 na GCF_000221805.1 PRJNA224116 SAMN00116864 AFTO00000000.1 na 904731 1280 Staphylococcus aureus subsp. aureus 21201 strain=21201 na latest Contig Major Full 2011-07-27 ASM22180v2 J. Craig Venter Institute GCA_000221805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/805/GCF_000221805.1_ASM22180v2/ na na na haploid bacteria 2748035 2748035 32.500000 0 46 46 NCBI RefSeq GCF_000221805.1-RS_2025_08_16 2025-08-16 2770 2567 64 na GCF_000221825.1 PRJNA224116 SAMN02436338 AFTN00000000.1 na 904730 1280 Staphylococcus aureus subsp. aureus 21200 strain=21200 na latest Contig Major Full 2011-07-27 ASM22182v2 J. Craig Venter Institute GCA_000221825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/825/GCF_000221825.1_ASM22182v2/ na na na haploid bacteria 2674346 2674346 32.500000 0 29 29 NCBI RefSeq GCF_000221825.1-RS_2025_08_18 2025-08-18 2637 2483 64 na GCF_000221845.1 PRJNA224116 SAMN02436337 AFTM00000000.1 na 904728 1280 Staphylococcus aureus subsp. aureus 21195 strain=21195 na latest Contig Major Full 2011-07-27 ASM22184v2 J. Craig Venter Institute GCA_000221845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/845/GCF_000221845.1_ASM22184v2/ na na na haploid bacteria 2819236 2819236 33.000000 0 54 54 NCBI RefSeq GCF_000221845.1-RS_2025_08_18 2025-08-18 2851 2688 61 na GCF_000221885.1 PRJNA224116 SAMN02471605 AFVR00000000.1 na 1038844 562 Escherichia coli O104:H4 str. TY-2482 strain=TY-2482 na latest Scaffold Major Full 2011-07-28 E.coli_0104:H4_Illumina_1.0 BGI GCA_000221885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/885/GCF_000221885.1_E.coli_0104_H4_Illumina_1.0/ na na na haploid bacteria 5440378 5345887 50.500000 0 99 242 NCBI RefSeq GCF_000221885.1-RS_2025_06_08 2025-06-08 5493 4953 103 21793736 GCF_000221945.2 PRJNA224116 SAMN02470228 AFFP00000000.2 na 948565 728 Avibacterium paragallinarum 72 strain=72 na latest Contig Major Full 2013-06-28 ASM22194v4 Laboratory FARVET, Peru GCA_000221945.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/945/GCF_000221945.2_ASM22194v4/ na na na haploid bacteria 2453490 2453490 41.000000 0 75 75 NCBI RefSeq GCF_000221945.2-RS_2026_04_18 2026-04-18 2429 2302 58 23861570 GCF_000221965.1 PRJNA224116 SAMN02603062 na na 990315 339 Xanthomonas campestris pv. raphani 756C strain=756C na latest Complete Genome Major Full 2011-07-29 ASM22196v1 Center for Bioinformatics and Computational Biology GCA_000221965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/965/GCF_000221965.1_ASM22196v1/ na na na haploid bacteria 4941214 4941214 65.500000 1 1 1 NCBI RefSeq GCF_000221965.1-RS_2026_05_07 2026-05-07 4272 4041 146 21784931 GCF_000221985.1 PRJNA224116 SAMN02603728 na reference genome 1054460 257758 Streptococcus pseudopneumoniae IS7493 strain=IS7493 na latest Complete Genome Major Full 2011-07-29 ASM22198v1 Public Health Laboratory- Toronto GCA_000221985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/221/985/GCF_000221985.1_ASM22198v1/ na na na haploid bacteria 2195458 2195458 40.000000 2 2 2 NCBI RefSeq GCF_000221985.1-RS_2026_03_20 2026-03-20 2299 2080 47 21994930 GCF_000222025.1 PRJNA224116 SAMN02952884 AFQO00000000.1 na 1028803 726 Haemophilus haemolyticus M19501 strain=M19501 na latest Contig Major Full 2011-07-29 ASM22202v2 Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention GCA_000222025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/025/GCF_000222025.1_ASM22202v2/ na na na haploid bacteria 1884911 1884911 38.500000 0 22 22 NCBI RefSeq GCF_000222025.1-RS_2026_03_20 2026-03-20 1849 1715 80 21952546 GCF_000222045.1 PRJNA224116 SAMN02952885 AFQP00000000.1 na 1028804 726 Haemophilus haemolyticus M21127 strain=M21127 na latest Contig Major Full 2011-07-29 ASM22204v2 Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention GCA_000222045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/045/GCF_000222045.1_ASM22204v2/ na na na haploid bacteria 1945624 1945624 38.500000 0 38 38 NCBI RefSeq GCF_000222045.1-RS_2026_03_20 2026-03-20 1943 1784 74 21952546 GCF_000222105.3 PRJNA224116 SAMN00622208 AFVW00000000.2 reference genome 1041522 339268 Mycobacterium colombiense CECT 3035 strain=CECT 3035 na latest Contig Major Full 2012-09-11 ASM22210v4 Universidad Nacional de Colombia GCA_000222105.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/105/GCF_000222105.3_ASM22210v4/ na assembly from type material na haploid bacteria 5579559 5579559 68.000000 0 17 17 NCBI RefSeq GCF_000222105.3-RS_2026_03_28 2026-03-28 5314 5197 54 21952541 GCF_000222125.1 PRJNA224116 SAMN02470122 AFFX00000000.1 na 686578 686578 Pseudomonas sp. S9 strain=S9 na latest Contig Major Full 2011-07-29 ASM22212v2 Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China GCA_000222125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/125/GCF_000222125.1_ASM22212v2/ na na na haploid bacteria 4796529 4796529 56.500000 0 25 25 NCBI RefSeq GCF_000222125.1-RS_2025_08_27 2025-08-27 4510 4272 65 21622758 GCF_000222145.1 PRJNA224116 SAMN02470633 ADOO00000000.1 na 756012 674 Vibrio mimicus SX-4 strain=SX-4 na latest Scaffold Major Full 2011-08-02 ASM22214v1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000222145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/145/GCF_000222145.1_ASM22214v1/ na na na haploid bacteria 4273610 4273352 46.500000 0 31 35 NCBI RefSeq GCF_000222145.1-RS_2026_04_02 2026-04-02 3945 3745 99 21731695 GCF_000222225.1 PRJNA224116 SAMN00855421 AFSZ00000000.1 na 992402 470 Acinetobacter baumannii ABNIH1 strain=ABNIH1 na latest Contig Major Full 2011-08-01 ASM22222v2 NIH Intramural Sequencing Center GCA_000222225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/225/GCF_000222225.1_ASM22222v2/ na na na haploid bacteria 3899186 3899186 39.000000 0 103 103 NCBI RefSeq GCF_000222225.1-RS_2026_02_11 2026-02-11 3804 3508 69 21825119 GCF_000222245.1 PRJNA224116 SAMN00857848 AFTA00000000.1 na 992403 470 Acinetobacter baumannii ABNIH2 strain=ABNIH2 na latest Contig Major Full 2011-08-01 ASM22224v2 NIH Intramural Sequencing Center GCA_000222245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/245/GCF_000222245.1_ASM22224v2/ na na na haploid bacteria 3938086 3938086 39.000000 0 125 125 NCBI RefSeq GCF_000222245.1-RS_2026_02_02 2026-02-02 3865 3691 65 21825119 GCF_000222265.1 PRJNA224116 SAMN00857859 AFTB00000000.1 na 992404 470 Acinetobacter baumannii ABNIH3 strain=ABNIH3 na latest Contig Major Full 2011-08-01 ASM22226v2 NIH Intramural Sequencing Center GCA_000222265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/265/GCF_000222265.1_ASM22226v2/ na na na haploid bacteria 4063283 4063283 39.000000 0 285 285 NCBI RefSeq GCF_000222265.1-RS_2026_02_09 2026-02-09 4058 3815 49 21825119 GCF_000222285.1 PRJNA224116 SAMN00857901 AFTC00000000.1 na 992405 470 Acinetobacter baumannii ABNIH4 strain=ABNIH4 na latest Contig Major Full 2011-08-01 ASM22228v2 NIH Intramural Sequencing Center GCA_000222285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/285/GCF_000222285.1_ASM22228v2/ na na na haploid bacteria 3988750 3988750 39.000000 0 184 184 NCBI RefSeq GCF_000222285.1-RS_2026_02_11 2026-02-11 4005 3652 79 21825119 GCF_000222305.1 PRJNA224116 SAMN02604204 na reference genome 521010 64897 Borreliella bissettiae DN127 strain=DN127 na latest Complete Genome Major Full 2011-08-01 ASM22230v1 University of Maryland School of Medicine - Institute for Genome Sciences GCA_000222305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/305/GCF_000222305.1_ASM22230v1/ na assembly from type material na haploid bacteria 1403443 1403443 28.500000 17 17 17 NCBI RefSeq GCF_000222305.1-RS_2026_01_15 2026-01-15 1453 1341 40 22207749;26813420 GCF_000222445.2 PRJNA224116 SAMN02471147 AFVQ00000000.2 na 1069536 2078 Sporolactobacillus inulinus CASD strain=CASD na latest Contig Major Full 2015-05-22 ASM22244v3 The Institute of Microbiology, Chinese Academy of Sciences GCA_000222445.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/445/GCF_000222445.2_ASM22244v3/ na na na haploid bacteria 3009527 3009527 45.000000 0 236 236 NCBI RefSeq GCF_000222445.2-RS_2026_03_21 2026-03-21 2884 2808 28 21952540 GCF_000222485.1 PRJNA224116 SAMN02261369 na reference genome 880070 104 Cyclobacterium marinum DSM 745 strain=DSM 745 na latest Complete Genome Major Full 2011-08-03 ASM22248v1 JGI GCA_000222485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/485/GCF_000222485.1_ASM22248v1/ na assembly from type material na haploid bacteria 6221273 6221273 38.000000 1 1 1 NCBI RefSeq GCF_000222485.1-RS_2025_12_11 2025-12-11 5009 4932 51 na GCF_000222505.1 PRJNA224116 SAMN02469876 AFSO00000000.1 na 1052677 562 Escherichia coli O104:H4 str. H112180282 strain=H112180282 na latest Contig Major Full 2011-08-03 ASM22250v2 Health Protection Agency GCA_000222505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/505/GCF_000222505.1_ASM22250v2/ na na na haploid bacteria 5369475 5369475 50.500000 0 44 44 NCBI RefSeq GCF_000222505.1-RS_2025_06_13 2025-06-13 5355 4952 108 na GCF_000222565.1 PRJNA224116 SAMN02951900 AFWD00000000.1 na 701176 701176 Vibrio sp. N418 strain=N418 na latest Contig Major Full 2011-08-04 ASM22256v1 FDA GCA_000222565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/565/GCF_000222565.1_ASM22256v1/ na na na haploid bacteria 4410660 4410660 44.500000 0 103 103 NCBI RefSeq GCF_000222565.1-RS_2025_01_15 2025-01-15 4004 3897 76 na GCF_000222585.1 PRJNA224116 SAMN02951901 AFWE00000000.1 na 870967 45658 Vibrio scophthalmi LMG 19158 strain=LMG 19158 na latest Contig Major Full 2011-08-04 ASM22258v1 FDA GCA_000222585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/585/GCF_000222585.1_ASM22258v1/ na assembly from type material na haploid bacteria 4854288 4854288 44.500000 0 230 230 NCBI RefSeq GCF_000222585.1-RS_2026_03_31 2026-03-31 4590 4420 73 21930677 GCF_000222605.1 PRJNA224116 SAMN02951902 AFWF00000000.1 reference genome 870968 142461 Vibrio ichthyoenteri ATCC 700023 strain=ATCC 700023 na latest Contig Major Full 2011-08-04 ASM22260v1 FDA GCA_000222605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/605/GCF_000222605.1_ASM22260v1/ na assembly from type material na haploid bacteria 4641086 4641086 44.500000 0 326 326 NCBI RefSeq GCF_000222605.1-RS_2026_03_31 2026-03-31 4471 4250 70 21930677 GCF_000222625.1 PRJNA224116 SAMN02951903 AFWG00000000.1 na 1051645 29497 Vibrio splendidus ATCC 33789 strain=ATCC 33789 na latest Contig Major Full 2011-08-04 ASM22262v2 Food and Drug Administration GCA_000222625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/625/GCF_000222625.1_ASM22262v2/ na na na haploid bacteria 4958736 4958736 44.000000 0 91 91 NCBI RefSeq GCF_000222625.1-RS_2025_06_01 2025-06-01 4598 4357 83 21930677 GCF_000222645.1 PRJNA224116 SAMN02951904 AFWH00000000.1 na 675816 28175 Vibrio orientalis CIP 102891 = ATCC 33934 strain=ATCC 33934 na latest Contig Major Full 2011-08-04 ASM22264v2 Food and Drug Administration GCA_000222645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/645/GCF_000222645.1_ASM22264v2/ na assembly from type material na haploid bacteria 4653015 4653015 44.500000 0 105 105 NCBI RefSeq GCF_000222645.1-RS_2026_01_27 2026-01-27 4311 4191 81 21930677 GCF_000222665.1 PRJNA224116 SAMN02951905 AFWI00000000.1 na 1051646 29498 Vibrio tubiashii ATCC 19109 strain=ATCC 19109 na latest Contig Major Full 2011-08-04 ASM22266v1 Food and Drug Administration GCA_000222665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/665/GCF_000222665.1_ASM22266v1/ na assembly from type material na haploid bacteria 5467464 5467464 45.000000 0 226 226 NCBI RefSeq GCF_000222665.1-RS_2026_03_31 2026-03-31 5216 5005 83 21930677 GCF_000222685.1 PRJNA224116 SAMN02951906 AFWJ00000000.1 na 1051649 28173 Vibrio nigripulchritudo ATCC 27043 strain=ATCC 27043 na latest Contig Major Full 2011-08-04 ASM22268v1 Food and Drug Administration GCA_000222685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/685/GCF_000222685.1_ASM22268v1/ na assembly from type material na haploid bacteria 6113582 6113582 46.000000 0 332 332 NCBI RefSeq GCF_000222685.1-RS_2026_04_23 2026-04-23 5749 5524 91 21930677 GCF_000222705.1 PRJNA224116 SAMN00621712 AFUB00000000.1 na 1000588 1303 Streptococcus mitis bv. 2 str. SK95 strain=SK95 na latest Contig Major Full 2011-08-04 ASM22270v2 J. Craig Venter Institute GCA_000222705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/705/GCF_000222705.1_ASM22270v2/ na na na haploid bacteria 2020730 2020730 41.000000 0 66 66 NCBI RefSeq GCF_000222705.1-RS_2025_03_31 2025-03-31 2027 1923 39 na GCF_000222725.1 PRJNA224116 SAMN00621706 AFUC00000000.1 na 1035185 1318 Streptococcus parasanguinis SK236 strain=SK236 na latest Contig Major Full 2011-08-04 ASM22272v2 J. Craig Venter Institute GCA_000222725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/725/GCF_000222725.1_ASM22272v2/ na na na haploid bacteria 1988691 1988691 42.000000 0 18 18 NCBI RefSeq GCF_000222725.1-RS_2025_07_30 2025-07-30 1952 1810 72 na GCF_000222745.1 PRJNA224116 SAMN00621699 AFUD00000000.1 na 888833 113107 Streptococcus australis ATCC 700641 strain=ATCC 700641 na latest Contig Major Full 2011-08-04 ASM22274v2 J. Craig Venter Institute GCA_000222745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/745/GCF_000222745.1_ASM22274v2/ na assembly from type material na haploid bacteria 2131358 2131358 42.000000 0 49 49 NCBI RefSeq GCF_000222745.1-RS_2026_03_31 2026-03-31 2082 1929 72 na GCF_000222765.1 PRJNA224116 SAMN00621700 AFUE00000000.1 na 889201 45634 Streptococcus cristatus ATCC 51100 strain=ATCC 51100 na latest Contig Major Full 2011-08-04 ASM22276v2 J. Craig Venter Institute GCA_000222765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/765/GCF_000222765.1_ASM22276v2/ na assembly from type material na haploid bacteria 1994424 1994424 42.500000 0 10 10 NCBI RefSeq GCF_000222765.1-RS_2025_07_29 2025-07-29 1990 1850 79 na GCF_000222835.1 PRJNA224116 SAMN02604205 na na 390236 29518 Borreliella afzelii PKo strain=PKo na latest Complete Genome Major Full 2011-08-05 ASM22283v1 University of Maryland School of Medicine - Institute For Genome Sciences GCA_000222835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/835/GCF_000222835.1_ASM22283v1/ na na na haploid bacteria 1404288 1404288 28.000000 18 18 18 NCBI RefSeq GCF_000222835.1-RS_2026_04_14 2026-04-14 1446 1365 41 22123755 GCF_000222975.1 PRJNA224116 SAMN02603531 na na 1035377 632 Yersinia pestis A1122 strain=A1122 na latest Complete Genome Major Full 2011-08-05 ASM22297v1 Los Alamos National Lab GCA_000222975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/975/GCF_000222975.1_ASM22297v1/ na na na haploid bacteria 4658411 4658411 47.500000 3 3 3 NCBI RefSeq GCF_000222975.1-RS_2026_04_06 2026-04-06 4246 3956 96 na GCF_000222995.1 PRJNA224116 SAMN02469897 AFXA00000000.1 na 1037410 114881 Mycoplasmopsis columbina SF7 strain=SF7 na latest Contig Major Full 2011-08-08 ASM22299v1 Huazhong Agricultural University GCA_000222995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/222/995/GCF_000222995.1_ASM22299v1/ na na na haploid bacteria 748210 748210 27.000000 0 15 15 NCBI RefSeq GCF_000222995.1-RS_2026_02_27 2026-02-27 646 598 40 23599295 GCF_000223015.1 PRJNA224116 SAMN02469824 AFWO00000000.1 na 1073985 562 Escherichia coli O104:H4 str. GOS1 strain=GOS1 na latest Contig Major Full 2011-08-08 ASM22301v2 Goettingen Genomics Laboratory GCA_000223015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/015/GCF_000223015.1_ASM22301v2/ na na na haploid bacteria 5311118 5311118 50.500000 0 208 208 NCBI RefSeq GCF_000223015.1-RS_2025_06_08 2025-06-08 5348 4876 82 21713444 GCF_000223035.1 PRJNA224116 SAMN02469825 AFWP00000000.1 na 1073841 562 Escherichia coli O104:H4 str. GOS2 strain=GOS2 na latest Contig Major Full 2011-08-08 ASM22303v2 Goettingen Genomics Laboratory GCA_000223035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/035/GCF_000223035.1_ASM22303v2/ na na na haploid bacteria 5308815 5308815 50.500000 0 243 243 NCBI RefSeq GCF_000223035.1-RS_2025_04_26 2025-04-26 5360 4885 75 21713444 GCF_000223095.1 PRJNA224116 SAMN02470783 AFSV00000000.1 na 1055325 666 Vibrio cholerae O1 str. Amazonia strain=Amazonia na latest Contig Major Full 2011-07-25 ASM22309v2 Federal University of Rio de Janeiro GCA_000223095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/095/GCF_000223095.1_ASM22309v2/ na na na haploid bacteria 3925563 3925563 47.500000 0 63 63 NCBI RefSeq GCF_000223095.1-RS_2025_04_15 2025-04-15 3572 3387 41 21952545 GCF_000223155.1 PRJNA224116 SAMN02470953 AFWM00000000.1 na 1071395 1398 Heyndrickxia coagulans XZL4 strain=XZL4 na latest Scaffold Major Full 2011-08-10 ASM22315v1 Shanghai Jiao Tong University GCA_000223155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/155/GCF_000223155.1_ASM22315v1/ na na na haploid bacteria 2866283 2854991 47.500000 0 123 232 NCBI RefSeq GCF_000223155.1-RS_2025_08_26 2025-08-26 2914 2719 77 24473268 GCF_000223195.1 PRJNA224116 SAMN02604297 na na 204722 29461 Brucella suis 1330 strain=1330 na latest Complete Genome Major Full 2011-08-10 ASM22319v1 Virginia Bioinformatics Institute GCA_000223195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/195/GCF_000223195.1_ASM22319v1/ na assembly from type material na haploid bacteria 3315163 3315163 57.500000 2 2 2 NCBI RefSeq GCF_000223195.1-RS_2026_06_16 2026-06-16 3228 3029 68 22038969 GCF_000223215.1 PRJNA224116 SAMN02603670 na reference genome 1045858 84377 Brachyspira intermedia PWS/A strain=PWS/A na latest Complete Genome Major Full 2011-08-10 ASM22321v1 National Veterinary Institute (SVA) GCA_000223215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/215/GCF_000223215.1_ASM22321v1/ na assembly from type material na haploid bacteria 3308048 3308048 27.000000 2 2 2 NCBI RefSeq GCF_000223215.1-RS_2025_12_10 2025-12-10 2930 2837 40 21816042 GCF_000223275.1 PRJNA224116 SAMN00621708 AFUV00000000.1 na 1035188 249188 Haemophilus pittmaniae HK 85 strain=HK 85 na latest Contig Major Full 2011-08-10 ASM22327v1 J. Craig Venter Institute GCA_000223275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/275/GCF_000223275.1_ASM22327v1/ na assembly from type material na haploid bacteria 2182608 2182608 42.500000 0 26 26 NCBI RefSeq GCF_000223275.1-RS_2025_07_24 2025-07-24 2146 1616 90 na GCF_000223315.1 PRJNA224116 SAMN00195327 AFUS00000000.1 na 944565 713008 Parvimonas sp. oral taxon 393 str. F0440 strain=F0440 na latest Contig Major Full 2011-08-10 ASM22331v1 J. Craig Venter Institute GCA_000223315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/315/GCF_000223315.1_ASM22331v1/ na na na haploid bacteria 1483165 1483165 28.000000 0 5 5 NCBI RefSeq GCF_000223315.1-RS_2026_04_21 2026-04-21 1610 1445 55 na GCF_000223355.1 PRJNA224116 SAMN00195309 AFUR00000000.1 na 944560 712119 Actinomyces sp. oral taxon 175 str. F0384 strain=F0384 na latest Contig Major Full 2011-08-10 ASM22335v1 J. Craig Venter Institute GCA_000223355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/355/GCF_000223355.1_ASM22335v1/ na na na haploid bacteria 3133330 3133330 68.500000 0 7 7 NCBI RefSeq GCF_000223355.1-RS_2024_07_28 2024-07-28 2620 2527 63 na GCF_000223375.1 PRJNA224116 SAMN02603460 na na 759362 92945 Ketogulonicigenium vulgare WSH-001 strain=WSH-001 na latest Complete Genome Major Full 2011-08-12 ASM22337v1 Jiangnan University GCA_000223375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/375/GCF_000223375.1_ASM22337v1/ na na na haploid bacteria 3277101 3277101 61.500000 3 3 3 NCBI RefSeq GCF_000223375.1-RS_2025_07_24 2025-07-24 3240 3130 77 21994934 GCF_000223395.1 PRJNA224116 SAMN02232047 na reference genome 694429 54252 Pyrolobus fumarii 1A strain=1A na latest Complete Genome Major Full 2011-08-12 ASM22339v1 DOE Joint Genome Institute GCA_000223395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/395/GCF_000223395.1_ASM22339v1/ na assembly from type material na haploid archaea 1843267 1843267 55.000000 1 1 1 NCBI RefSeq GCF_000223395.1-RS_2026_04_23 2026-04-23 2012 1954 52 21886865 GCF_000223485.1 PRJNA225527 SAMN00714472 AEIK00000000.1 reference genome 619300 340170 Spathaspora passalidarum NRRL Y-27907 strain=NRRL Y-27907 na latest Scaffold Major Full 2011-08-25 Spathaspora passalidarum v2.0 DOE Joint Genome Institute GCA_000223485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/485/GCF_000223485.1_Spathaspora_passalidarum_v2.0/ na assembly from type material na haploid fungi 13182099 13079731 37.500000 0 8 26 DOE Joint Genome Institute GCF_000223485.1-RS_2026_03 2026-03-04 5978 5978 0 21788494 GCF_000223885.1 PRJNA224116 SAMN02261377 na na 868597 40324 Stenotrophomonas maltophilia JV3 strain=JV3 na latest Complete Genome Major Full 2011-08-17 ASM22388v1 JGI GCA_000223885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/885/GCF_000223885.1_ASM22388v1/ na na na haploid bacteria 4544477 4544477 67.000000 1 1 1 NCBI RefSeq GCF_000223885.1-RS_2025_05_20 2025-05-20 4189 4083 90 na GCF_000223905.1 PRJNA224116 SAMN02602960 na reference genome 634497 51589 Haloarcula hispanica ATCC 33960 strain=CGMCC 1.2049 na latest Complete Genome Major Full 2011-08-17 ASM22390v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000223905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/905/GCF_000223905.1_ASM22390v1/ na assembly from type material na haploid archaea 3890005 3890005 62.500000 3 3 3 NCBI RefSeq GCF_000223905.1-RS_2025_11_21 2025-11-21 3944 3824 60 21994921 GCF_000223925.1 PRJNA224116 SAMN02471403 AFXI00000000.1 na 1051005 287 Pseudomonas aeruginosa 9BR strain=9BR na latest Contig Major Full 2011-08-17 ASM22392v2 IBIS, Universite Laval GCA_000223925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/925/GCF_000223925.1_ASM22392v2/ na na na haploid bacteria 6849861 6849861 66.000000 0 2 2 NCBI RefSeq GCF_000223925.1-RS_2025_04_15 2025-04-15 6469 6307 81 22207740 GCF_000223945.1 PRJNA224116 SAMN02471401 AFXJ00000000.1 na 1051003 287 Pseudomonas aeruginosa 19BR strain=19BR na latest Complete Genome Major Full 2011-08-17 ASM22394v2 IBIS, Universite Laval GCA_000223945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/945/GCF_000223945.1_ASM22394v2/ na na na haploid bacteria 6742964 6742964 66.000000 1 1 1 NCBI RefSeq GCF_000223945.1-RS_2025_04_26 2025-04-26 6332 6163 81 22207740 GCF_000223965.1 PRJNA224116 SAMN02471402 AFXK00000000.1 na 1051004 287 Pseudomonas aeruginosa 213BR strain=213BR na latest Complete Genome Major Full 2011-08-17 ASM22396v2 IBIS, Universite Laval GCA_000223965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/965/GCF_000223965.1_ASM22396v2/ na na na haploid bacteria 6719211 6719211 66.000000 1 1 1 NCBI RefSeq GCF_000223965.1-RS_2025_04_15 2025-04-15 6306 6144 81 22207740 GCF_000223985.1 PRJNA224116 SAMN02261407 AFWV00000000.1 reference genome 768671 244573 Thiocapsa marina 5811 strain=5811 na latest Contig Major Full 2011-08-18 ASM22398v1 JGI GCA_000223985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/223/985/GCF_000223985.1_ASM22398v1/ na assembly from type material na haploid bacteria 5595540 5595540 64.000000 0 62 62 NCBI RefSeq GCF_000223985.1-RS_2025_12_09 2025-12-09 4970 4836 55 na GCF_000224005.2 PRJNA224116 SAMN02256540 na reference genome 765910 37487 Marichromatium purpuratum 984 strain=984 na latest Complete Genome Major Full 2014-01-03 ASM22400v3 DOE Joint Genome Institute GCA_000224005.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/005/GCF_000224005.2_ASM22400v3/ na assembly from type material na haploid bacteria 3779112 3779112 68.000000 1 1 1 NCBI RefSeq GCF_000224005.2-RS_2025_12_09 2025-12-09 3339 3227 68 na GCF_000224065.1 PRJNA224116 SAMN02256531 AFWT00000000.1 reference genome 765913 210408 Thiorhodococcus drewsii AZ1 strain=AZ1 na latest Contig Major Full 2011-08-19 ASM22406v1 DOE Joint Genome Institute GCA_000224065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/065/GCF_000224065.1_ASM22406v1/ na assembly from type material na haploid bacteria 5524189 5524189 62.500000 0 141 141 NCBI RefSeq GCF_000224065.1-RS_2026_05_01 2026-05-01 4817 4633 60 na GCF_000224085.1 PRJNA224116 SAMN02232041 na reference genome 886377 111501 Allomuricauda ruestringensis DSM 13258 strain=DSM 13258 na latest Complete Genome Major Full 2011-08-19 ASM22408v1 DOE Joint Genome Institute GCA_000224085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/085/GCF_000224085.1_ASM22408v1/ na assembly from type material na haploid bacteria 3842422 3842422 41.500000 1 1 1 NCBI RefSeq GCF_000224085.1-RS_2026_03_03 2026-03-03 3444 3378 48 22768362 GCF_000224105.1 PRJNA224116 SAMN02604224 na na 743965 2123 Mycoplasma putrefaciens KS1 strain=KS1 na latest Complete Genome Major Full 2011-08-19 ASM22410v1 University of Missouri GCA_000224105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/105/GCF_000224105.1_ASM22410v1/ na assembly from type material na haploid bacteria 832603 832603 27.000000 1 1 1 NCBI RefSeq GCF_000224105.1-RS_2026_02_26 2026-02-26 730 684 39 21994925 GCF_000224255.1 PRJNA224116 SAMN02470907 AFWQ00000000.1 na 1051985 28091 Neisseria weaveri LMG 5135 strain=LMG 5135 na latest Contig Major Full 2011-08-22 ASM22425v1 Seoul National University GCA_000224255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/255/GCF_000224255.1_ASM22425v1/ na assembly from type material na haploid bacteria 2183368 2183368 49.000000 0 46 46 NCBI RefSeq GCF_000224255.1-RS_2026_03_31 2026-03-31 2080 2002 54 22188430 GCF_000224275.1 PRJNA224116 SAMN02470917 AFWR00000000.1 na 1051972 28091 Neisseria weaveri ATCC 51223 strain=ATCC 51223 na latest Contig Major Full 2011-08-22 ASM22427v2 Seoul National University GCA_000224275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/275/GCF_000224275.1_ASM22427v2/ na assembly from heterotypic synonym type material na haploid bacteria 2125582 2125582 49.000000 0 40 40 NCBI RefSeq GCF_000224275.1-RS_2026_03_31 2026-03-31 1994 1920 53 22188430 GCF_000224315.1 PRJNA224116 SAMN02471002 AFYA00000000.1 na 1075088 1718 Corynebacterium glutamicum S9114 strain=S9114 na latest Contig Major Full 2011-08-23 ASM22431v2 SCUT GCA_000224315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/315/GCF_000224315.1_ASM22431v2/ na na na haploid bacteria 3262889 3262889 54.000000 0 35 35 NCBI RefSeq GCF_000224315.1-RS_2026_03_20 2026-03-20 3044 2945 56 21994927 GCF_000224335.1 PRJNA224116 SAMN02469766 AFXZ00000000.1 reference genome 1046627 456455 Bizionia argentinensis JUB59 strain=JUB59 na latest Contig Major Full 2011-08-23 BizArg_1.0 Departamento de Quimica Biologica - Facultad de Ciencias Exactas y Naturales - Universidad de Buenos Aires GCA_000224335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/335/GCF_000224335.1_BizArg_1.0/ na assembly from type material na haploid bacteria 3279329 3279329 34.000000 0 70 70 NCBI RefSeq GCF_000224335.1-RS_2025_11_21 2025-11-21 3040 2971 42 18842857 GCF_000224395.1 PRJNA224116 SAMN02471003 AFYG00000000.1 na 1069495 562 Escherichia coli XH001 strain=XH001 na latest Contig Major Full 2011-08-24 ASM22439v2 School of Bioscience and Bioengineering, South China University of Technology GCA_000224395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/395/GCF_000224395.1_ASM22439v2/ na na na haploid bacteria 4839280 4839280 50.500000 1 108 108 NCBI RefSeq GCF_000224395.1-RS_2025_06_13 2025-06-13 4767 4463 93 na GCF_000224415.1 PRJNA224116 SAMN02469456 AFXQ00000000.1 na 1045009 1045009 Citricoccus sp. CH26A strain=CH26A na latest Contig Major Full 2011-08-24 ASM22441v2 LANGEBIO GCA_000224415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/415/GCF_000224415.1_ASM22441v2/ na na na haploid bacteria 3466927 3466927 71.000000 0 67 67 NCBI RefSeq GCF_000224415.1-RS_2024_08_13 2024-08-13 3114 2981 54 21994924 GCF_000224435.1 PRJNA224116 SAMN02603755 na na 707235 1773 Mycobacterium tuberculosis CTRI-2 strain=CTRI-2 na latest Complete Genome Major Full 2011-08-25 ASM22443v1 Research Institute for Physical-Chemical Medicine, Moscow, Russia GCA_000224435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/435/GCF_000224435.1_ASM22443v1/ na na na haploid bacteria 4398525 4398525 65.500000 1 1 1 NCBI RefSeq GCF_000224435.1-RS_2025_05_22 2025-05-22 4151 3912 51 23437175 GCF_000224455.1 PRJNA224116 SAMN02469822 AFOC00000000.1 reference genome 1048808 54396 endosymbiont of Riftia pachyptila (vent Ph05) na na latest Contig Major Full 2011-08-25 ASM22445v1 Georg-August-University Goettingen GCA_000224455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/455/GCF_000224455.1_ASM22445v1/ na na na haploid bacteria 3481040 3481040 59.000000 0 197 197 NCBI RefSeq GCF_000224455.1-RS_2026_03_30 2026-03-30 3400 3148 49 na GCF_000224515.1 PRJNA224116 SAMN02471585 AGAF00000000.1 na 913865 913865 Desulfosporosinus sp. OT strain=OT na latest Contig Major Full 2011-08-26 ASM22451v1 Asbach GCA_000224515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/515/GCF_000224515.1_ASM22451v1/ na na na haploid bacteria 5702338 5702338 42.000000 0 282 282 NCBI RefSeq GCF_000224515.1-RS_2024_06_07 2024-06-07 5829 5550 84 21994931 GCF_000224535.1 PRJNA224116 SAMN02604320 na na 1055528 210 Helicobacter pylori Puno120 strain=Puno120 na latest Complete Genome Major Full 2011-08-26 ASM22453v1 Washington University Medical School GCA_000224535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/535/GCF_000224535.1_ASM22453v1/ na na na haploid bacteria 1637762 1637762 39.000000 2 2 2 NCBI RefSeq GCF_000224535.1-RS_2026_01_15 2026-01-15 1566 1429 45 na GCF_000224555.1 PRJNA224116 SAMN02604321 na na 1055529 210 Helicobacter pylori Puno135 strain=Puno135 na latest Complete Genome Major Full 2011-08-26 ASM22455v1 Washington University Medical School GCA_000224555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/555/GCF_000224555.1_ASM22455v1/ na na na haploid bacteria 1646139 1646139 39.000000 1 1 1 NCBI RefSeq GCF_000224555.1-RS_2026_01_10 2026-01-10 1591 1479 45 na GCF_000224575.1 PRJNA224116 SAMN02604322 na na 1055530 210 Helicobacter pylori SNT49 strain=Santal49 na latest Complete Genome Major Full 2011-08-26 ASM22457v1 Washington University Medical School GCA_000224575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/575/GCF_000224575.1_ASM22457v1/ na na na haploid bacteria 1610830 1610830 39.000000 2 2 2 NCBI RefSeq GCF_000224575.1-RS_2026_01_10 2026-01-10 1545 1412 45 na GCF_000224595.1 PRJNA224116 SAMN02463828 ADCT00000000.1 na 563031 563031 Prevotella sp. C561 strain=C561 na latest Scaffold Major Full 2011-09-09 Prevotella_sp_C561_V1 Broad Institute GCA_000224595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/595/GCF_000224595.1_Prevotella_sp_C561_V1/ na na na haploid bacteria 4031149 3997174 42.000000 0 76 195 NCBI RefSeq GCF_000224595.1-RS_2024_08_13 2024-08-13 3273 3004 68 na GCF_000224615.1 PRJNA224116 SAMN02463847 ADGI00000000.1 reference genome 702438 28136 Segatella oulorum F0390 strain=F0390 na latest Scaffold Major Full 2011-09-09 Prev_oulo_F0390_V1 Broad Institute GCA_000224615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/615/GCF_000224615.1_Prev_oulo_F0390_V1/ na na na haploid bacteria 2805893 2788455 47.000000 0 16 81 NCBI RefSeq GCF_000224615.1-RS_2026_01_08 2026-01-08 2435 2294 61 na GCF_000224635.1 PRJNA224116 SAMN02463796 ACWM00000000.1 na 665942 665942 Desulfovibrio sp. 6_1_46AFAA strain=6_1_46AFAA na latest Scaffold Major Full 2011-09-09 Desulfovibrio_sp_6_1_46AFAA_V1 Broad Institute GCA_000224635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/635/GCF_000224635.1_Desulfovibrio_sp_6_1_46AFAA_V1/ na na na haploid bacteria 3847181 3826115 61.000000 0 20 97 NCBI RefSeq GCF_000224635.1-RS_2025_08_25 2025-08-25 3426 3306 62 na GCF_000224655.1 PRJNA224116 SAMN02463823 ADCO00000000.1 na 693988 693988 Bilophila sp. 4_1_30 strain=4_1_30 na latest Scaffold Major Full 2011-09-09 Bilophila_sp_4_1_30_V1 Broad Institute GCA_000224655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/655/GCF_000224655.1_Bilophila_sp_4_1_30_V1/ na na na haploid bacteria 4618310 4470170 59.500000 0 69 418 NCBI RefSeq GCF_000224655.1-RS_2024_08_13 2024-08-13 4101 3929 65 na GCF_000224675.1 PRJNA224116 SAMN02232020 na reference genome 885040 885040 Enterobacter soli strain=LF7a na latest Complete Genome Major Full 2011-08-30 ASM22467v1 DOE Joint Genome Institute GCA_000224675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/675/GCF_000224675.1_ASM22467v1/ na na na haploid bacteria 5012132 5012132 54.000000 3 3 3 NCBI RefSeq GCF_000224675.1-RS_2026_05_01 2026-05-01 4812 4636 112 na GCF_000224695.1 PRJNA224116 SAMN02470954 AFXE00000000.1 na 1074493 13690 Sphingobium yanoikuyae XLDN2-5 strain=XLDN2-5 na latest Contig Major Full 2011-08-30 ASM22469v2 Shanghai Jiao Tong University GCA_000224695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/695/GCF_000224695.1_ASM22469v2/ na na na haploid bacteria 5357836 5357836 64.500000 0 173 173 NCBI RefSeq GCF_000224695.1-RS_2026_05_19 2026-05-19 5250 5096 60 na GCF_000224715.1 PRJNA224116 SAMN02471205 AFYF00000000.1 reference genome 1043205 1078471 Serinicoccus profundi MCCC 1A05965 strain=MCCC 1A05965 na latest Contig Major Full 2011-08-30 ASM22471v2 Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China GCA_000224715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/715/GCF_000224715.1_ASM22471v2/ na assembly from type material na haploid bacteria 3433900 3433900 72.000000 0 102 102 NCBI RefSeq GCF_000224715.1-RS_2026_03_20 2026-03-20 3264 3159 51 na GCF_000224745.1 PRJNA224116 SAMN02261379 na na 762570 29549 Rhodothermus marinus SG0.5JP17-172 strain=SG0.5JP17-172 na latest Complete Genome Major Full 2011-08-31 ASM22474v1 JGI GCA_000224745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/745/GCF_000224745.1_ASM22474v1/ na na na haploid bacteria 3334122 3334122 64.500000 3 3 3 NCBI RefSeq GCF_000224745.1-RS_2025_06_07 2025-06-07 3008 2926 52 na GCF_000224785.1 PRJNA224116 SAMN02470213 AGAV00000000.1 reference genome 558169 558169 Lentibacillus jeotgali strain=Grbi na latest Contig Major Full 2011-08-31 ASM22478v2 Kyung Hee University GCA_000224785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/785/GCF_000224785.1_ASM22478v2/ na assembly from type material na haploid bacteria 3775822 3775822 42.500000 0 31 31 NCBI RefSeq GCF_000224785.1-RS_2026_05_01 2026-05-01 3773 3627 70 na GCF_000224925.1 PRJNA224116 SAMN02469821 AFZB00000000.1 reference genome 1049564 94785 endosymbiont of Tevnia jerichonana (vent Tica) na na latest Contig Major Full 2011-08-31 ASM22492v1 Georg-August-University Goettingen GCA_000224925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/925/GCF_000224925.1_ASM22492v1/ na na na haploid bacteria 3637102 3637102 58.000000 0 184 184 NCBI RefSeq GCF_000224925.1-RS_2025_08_15 2025-08-15 3411 3253 52 na GCF_000224945.1 PRJNA224116 SAMN02471384 AGBD00000000.1 na 1073571 483937 Paenibacillus riograndensis SBR5 strain=SBR5 na latest Contig Major Full 2011-08-31 PR_1 UFRGS GCA_000224945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/945/GCF_000224945.1_PR_1/ na assembly from type material na haploid bacteria 7407224 7407224 51.500000 0 1976 1976 NCBI RefSeq GCF_000224945.1-RS_2026_05_16 2026-05-16 7303 6844 41 na GCF_000224965.2 PRJNA224116 SAMN02604239 na na 1075106 28025 Bifidobacterium animalis subsp. lactis BLC1 strain=BLC1 na latest Complete Genome Major Full 2013-02-05 ASM22496v2 University of Parma Sacco srl GCA_000224965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/965/GCF_000224965.2_ASM22496v2/ na na na haploid bacteria 1938583 1938583 60.500000 1 1 1 NCBI RefSeq GCF_000224965.2-RS_2026_02_06 2026-02-06 1623 1539 67 22038957 GCF_000224985.1 PRJNA224116 SAMN02603606 na reference genome 1069534 1623 Ligilactobacillus ruminis ATCC 27782 strain=ATCC 27782 na latest Complete Genome Major Full 2011-09-01 ASM22498v1 Microbiology Dept, University College Cork GCA_000224985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/985/GCF_000224985.1_ASM22498v1/ na na na haploid bacteria 2066652 2066652 43.500000 1 1 1 NCBI RefSeq GCF_000224985.1-RS_2026_03_30 2026-03-30 2073 1911 89 21995554 GCF_000225005.1 PRJNA224116 SAMN02471617 AGBG00000000.1 na 519989 519989 Ectothiorhodospira sp. PHS-1 strain=PHS-1 na latest Contig Major Full 2011-09-01 PHS-1-454 UC Santa Cruz GCA_000225005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/005/GCF_000225005.1_PHS-1-454/ na na na haploid bacteria 2943210 2943210 63.500000 0 114 114 NCBI RefSeq GCF_000225005.1-RS_2024_08_22 2024-08-22 2841 2721 54 na GCF_000225025.1 PRJNA224116 SAMN00015360 AFDQ00000000.1 na 1078030 562 Escherichia coli O91:H21 str. B2F1 strain=STEC_B2F1 na latest Contig Major Full 2011-09-01 ASM22502v2 Institute for Genome Sciences GCA_000225025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/025/GCF_000225025.1_ASM22502v2/ na na na haploid bacteria 4989407 4989407 51.000000 0 37 37 NCBI RefSeq GCF_000225025.1-RS_2025_06_13 2025-06-13 4924 4571 149 na GCF_000225045.1 PRJNA224116 SAMN00015368 AFDR00000000.1 na 754085 562 Escherichia coli STEC_C165-02 strain=STEC_C165-02 na latest Contig Major Full 2011-09-01 ASM22504v2 Institute for Genome Sciences GCA_000225045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/045/GCF_000225045.1_ASM22504v2/ na na na haploid bacteria 5009267 5009267 50.500000 0 30 30 NCBI RefSeq GCF_000225045.1-RS_2025_06_14 2025-06-14 4888 4604 141 na GCF_000225145.1 PRJNA224116 SAMN00016950 AFDW00000000.1 na 754087 562 Escherichia coli STEC_EH250 strain=STEC_EH250 na latest Contig Major Full 2011-09-01 ASM22514v2 Institute for Genome Sciences GCA_000225145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/145/GCF_000225145.1_ASM22514v2/ na na na haploid bacteria 5211768 5211768 51.000000 0 41 41 NCBI RefSeq GCF_000225145.1-RS_2025_06_13 2025-06-13 5206 4743 147 na GCF_000225185.2 PRJNA224116 SAMN00015143 AFDY00000000.2 na 754088 562 Escherichia coli STEC_H.I.8 strain=STEC_H.I.8 na latest Contig Major Full 2018-03-27 ASM22518v3 Institute for Genome Sciences GCA_000225185.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/185/GCF_000225185.2_ASM22518v3/ na na na haploid bacteria 5420504 5420504 50.500000 0 170 170 NCBI RefSeq GCF_000225185.2-RS_2025_06_23 2025-06-23 5675 5104 133 23858472 GCF_000225205.1 PRJNA224116 SAMN00016450 AFDZ00000000.1 na 754089 562 Escherichia coli STEC_MHI813 strain=STEC_MHI813 na latest Contig Major Full 2011-09-01 ASM22520v2 Institute for Genome Sciences GCA_000225205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/205/GCF_000225205.1_ASM22520v2/ na na na haploid bacteria 5233365 5233365 50.500000 0 30 30 NCBI RefSeq GCF_000225205.1-RS_2025_06_14 2025-06-14 5076 4784 124 na GCF_000225225.1 PRJNA224116 SAMN00016457 AFEA00000000.1 na 754090 562 Escherichia coli STEC_S1191 strain=STEC_S1191 na latest Contig Major Full 2011-09-01 ASM22522v2 Institute for Genome Sciences GCA_000225225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/225/GCF_000225225.1_ASM22522v2/ na na na haploid bacteria 5145311 5145311 50.500000 0 39 39 NCBI RefSeq GCF_000225225.1-RS_2025_06_13 2025-06-13 5167 4738 144 na GCF_000225265.1 PRJNA224116 SAMN02603461 na na 1006007 1404 Priestia megaterium WSH-002 strain=WSH-002 na latest Complete Genome Major Full 2011-09-02 ASM22526v1 Jiangnan University, State Key Laboratory of Food Science and Technology; Tianjin Biochip Corperation GCA_000225265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/265/GCF_000225265.1_ASM22526v1/ na na na haploid bacteria 5075293 5075293 38.000000 4 4 4 NCBI RefSeq GCF_000225265.1-RS_2025_09_10 2025-09-10 5344 5050 156 22038958 GCF_000225325.1 PRJNA224116 SAMN02603515 na na 714313 1625 Fructilactobacillus sanfranciscensis TMW 1.1304 strain=TMW 1.1304 na latest Complete Genome Major Full 2011-09-06 ASM22532v1 Lehrstuhl fuer technische Mikrobiologie, Technische Universitaet Muenchen GCA_000225325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/325/GCF_000225325.1_ASM22532v1/ na na na haploid bacteria 1375770 1375770 35.000000 3 3 3 NCBI RefSeq GCF_000225325.1-RS_2026_04_04 2026-04-04 1474 1330 85 21995419 GCF_000225345.1 PRJNA224116 SAMN02604129 na reference genome 585394 301301 Roseburia hominis A2-183 strain=A2-183 na latest Complete Genome Major Full 2011-09-06 ASM22534v1 University of Aberdeen GCA_000225345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/345/GCF_000225345.1_ASM22534v1/ na assembly from type material na haploid bacteria 3592125 3592125 48.500000 1 1 1 NCBI RefSeq GCF_000225345.1-RS_2025_12_13 2025-12-13 3348 3216 74 26543119 GCF_000225365.1 PRJNA224116 SAMN02470737 AGAG00000000.1 na 1073972 49118 Candidatus Arthromitus sp. SFB-mouse-NYU strain=SFB-mouse-NYU na latest Contig Major Full 2011-09-06 ASM22536v2 NYU School of Medicine GCA_000225365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/365/GCF_000225365.1_ASM22536v2/ na na na haploid bacteria 1569870 1569870 28.000000 0 5 5 NCBI RefSeq GCF_000225365.1-RS_2025_08_17 2025-08-17 1547 1479 47 21925113 GCF_000225385.1 PRJNA224116 SAMN02471912 AGBV00000000.1 na 1074494 1304 Streptococcus salivarius M18 strain=M18 na latest Contig Major Full 2011-09-06 ASM22538v2 University of Otago GCA_000225385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/385/GCF_000225385.1_ASM22538v2/ na na na haploid bacteria 2325981 2325981 39.500000 1 6 6 NCBI RefSeq GCF_000225385.1-RS_2026_06_20 2026-06-20 2205 2048 90 na GCF_000225445.1 PRJNA224116 SAMN02604329 na na 1005090 9 Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) strain=Ak na latest Complete Genome Major Full 2011-09-07 ASM22544v1 Yale University GCA_000225445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/445/GCF_000225445.1_ASM22544v1/ na na na haploid bacteria 653223 653223 25.500000 3 3 3 NCBI RefSeq GCF_000225445.1-RS_2025_05_22 2025-05-22 628 583 38 21912528 GCF_000225465.1 PRJNA224116 SAMN02604330 na na 1005057 9 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) strain=Ua na latest Complete Genome Major Full 2011-09-07 ASM22546v1 Yale University GCA_000225465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/465/GCF_000225465.1_ASM22546v1/ na na na haploid bacteria 627953 627953 24.000000 3 3 3 NCBI RefSeq GCF_000225465.1-RS_2025_05_22 2025-05-22 597 550 38 21912528 GCF_000225485.1 PRJNA224116 SAMD00015735 BABS00000000.1 na 749388 104102 Acetobacter tropicalis NBRC 101654 strain=NBRC 101654 na latest Contig Major Full 2011-06-28 ASM22548v1 Yamaguchi University GCA_000225485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/485/GCF_000225485.1_ASM22548v1/ na na na haploid bacteria 3718538 3718538 55.500000 0 773 773 NCBI RefSeq GCF_000225485.1-RS_2026_03_24 2026-03-24 3486 3266 45 21554859 GCF_000225505.1 PRJNA224116 SAMD00041830 BACI00000000.1 na 1027371 84096 Gordonia alkanivorans NBRC 16433 strain=NBRC 16433 na latest Contig Major Full 2011-08-16 ASM22550v1 National Institute of Technology and Evaluation GCA_000225505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/505/GCF_000225505.1_ASM22550v1/ na assembly from type material na haploid bacteria 5071550 5071550 67.500000 0 132 132 NCBI RefSeq GCF_000225505.1-RS_2025_09_02 2025-09-02 4659 4476 57 na GCF_000225525.1 PRJNA224116 SAMN02471576 AGBF00000000.1 reference genome 700597 1073330 Streptomyces zinciresistens K42 strain=K42 na latest Contig Major Full 2011-09-07 ASM22552v1 College of Life Sciences, Northwest A & F University; Soil, Water and Environmental Science, University of Arizona GCA_000225525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/525/GCF_000225525.1_ASM22552v1/ na assembly from type material na haploid bacteria 8221694 8221694 72.500000 0 525 525 NCBI RefSeq GCF_000225525.1-RS_2026_04_23 2026-04-23 7667 7271 77 na GCF_000225545.1 PRJNA245119 SAMN02981262 ADOT00000000.1 reference genome 756982 2813651 Orbilia oligospora ATCC 24927 strain=ATCC 24927 na latest Scaffold Major Full 2011-09-08 AOL24927 1.0 Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, P. R. China GCA_000225545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/545/GCF_000225545.1_AOL24927_1.0/ na na na haploid fungi 40072829 39966216 44.500000 0 215 323 Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, P. R. China Annotation submitted by Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, P. R. China 2021-03-04 11479 11479 0 na GCF_000225565.1 PRJNA224116 SAMN02256539 AFWW00000000.1 na 598467 598467 Brenneria sp. EniD312 strain=EniD312 na latest Chromosome Major Full 2011-10-21 ASM22556v1 DOE Joint Genome Institute GCA_000225565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/565/GCF_000225565.1_ASM22556v1/ na na na haploid bacteria 4943773 4942873 56.000000 1 1 10 NCBI RefSeq GCF_000225565.1-RS_2024_08_13 2024-08-13 4627 4406 101 na GCF_000225605.1 PRJNA225510 SAMN02981304 AEVU00000000.1 reference genome 983644 73501 Cordyceps militaris CM01 strain=CM01 na latest Scaffold Major Full 2011-09-12 CmilitarisCM01_v01 Shanghai Institutes for Biological Sciences (SIBS), Chinese Academy of Sciences GCA_000225605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/605/GCF_000225605.1_CmilitarisCM01_v01/ na na na haploid fungi 32268578 32212078 51.500000 0 32 597 Shanghai Institutes for Biological Sciences (SIBS), Chinese Academy of Sciences Annotation submitted by Shanghai Institutes for Biological Sciences (SIBS), Chinese Academy of Sciences 2024-01-02 9651 9651 0 22112802 GCF_000225665.1 PRJNA224116 SAMN02470952 AGCF00000000.1 na 1078016 1833 Rhodococcus erythropolis XP strain=XP na latest Contig Major Full 2011-09-09 ASM22566v2 Shanghai Jiao Tong University GCA_000225665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/665/GCF_000225665.1_ASM22566v2/ na na na haploid bacteria 7229582 7229582 62.500000 0 9 9 NCBI RefSeq GCF_000225665.1-RS_2025_08_23 2025-08-23 6837 6675 71 na GCF_000225705.1 PRJNA224116 SAMN02463859 ADLS00000000.1 reference genome 742742 626935 Collinsella tanakaei YIT 12063 strain=YIT 12063 na latest Scaffold Major Full 2011-09-13 Coll_tana_YIT_12063_V1 Broad Institute GCA_000225705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/705/GCF_000225705.1_Coll_tana_YIT_12063_V1/ na assembly from type material na haploid bacteria 2492085 2482197 60.000000 0 20 45 NCBI RefSeq GCF_000225705.1-RS_2025_12_13 2025-12-13 2253 2165 70 na GCF_000225805.1 PRJNA224116 SAMN02471563 AGAS00000000.1 na 1079060 29438 Pseudomonas savastanoi pv. phaseolicola 1644R strain=1644R na latest Scaffold Major Full 2011-09-14 ASM22580v1 University of North Carolina GCA_000225805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/805/GCF_000225805.1_ASM22580v1/ na na na haploid bacteria 5888679 5870279 58.000000 0 970 1154 NCBI RefSeq GCF_000225805.1-RS_2026_01_15 2026-01-15 5877 5389 38 22414441 GCF_000225825.1 PRJNA224116 SAMN02470219 AGBX00000000.1 reference genome 1074488 661979 Brachybacterium squillarum M-6-3 strain=M-6-3 na latest Contig Major Full 2011-09-12 ASM22582v2 Kyung Hee University GCA_000225825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/825/GCF_000225825.1_ASM22582v2/ na assembly from type material na haploid bacteria 3191479 3191479 73.000000 0 8 8 NCBI RefSeq GCF_000225825.1-RS_2026_05_01 2026-05-01 2927 2819 59 na GCF_000225845.1 PRJNA224116 SAMN02471467 AFYE00000000.1 na 525362 1623 Ligilactobacillus ruminis ATCC 25644 strain=ATCC 25644 na latest Contig Major Full 2011-09-12 ASM22584v2 Microbiology Dept, University College Cork GCA_000225845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/845/GCF_000225845.1_ASM22584v2/ na na na haploid bacteria 2069085 2069085 43.500000 0 100 100 NCBI RefSeq GCF_000225845.1-RS_2026_04_04 2026-04-04 2036 1928 57 21995554 GCF_000225915.1 PRJNA224116 SAMN02604170 na na 981368 456327 Xanthomonas euvesicatoria pv. citrumelo F1 strain=F1 na latest Complete Genome Major Full 2011-09-14 ASM22591v1 University of Florida GCA_000225915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/915/GCF_000225915.1_ASM22591v1/ na na na haploid bacteria 4967469 4967469 65.000000 1 1 1 NCBI RefSeq GCF_000225915.1-RS_2026_05_05 2026-05-05 4218 4023 95 21908674 GCF_000225955.1 PRJNA224116 SAMN02603286 na na 1036743 1085 Rhodospirillum rubrum F11 strain=F11 na latest Complete Genome Major Full 2011-09-15 ASM22595v1 Gonzaga University Department of Chemistry and Biochemistry GCA_000225955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/955/GCF_000225955.1_ASM22595v1/ na na na haploid bacteria 4352825 4352825 65.500000 1 1 1 NCBI RefSeq GCF_000225955.1-RS_2026_02_06 2026-02-06 3930 3831 70 22194448 GCF_000225975.1 PRJNA224116 SAMN02471171 AGDB00000000.1 na 1084662 56458 Xanthomonas sacchari NCPPB 4393 strain=NCPPB 4393 na latest Contig Major Full 2011-09-15 ASM22597v2 The University of Exeter GCA_000225975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/975/GCF_000225975.1_ASM22597v2/ na na na haploid bacteria 4898376 4898376 69.000000 0 470 470 NCBI RefSeq GCF_000225975.1-RS_2026_04_06 2026-04-06 4389 4228 65 24710305 GCF_000225995.1 PRJNA224116 SAMN02470253 AFBX00000000.1 na 1003237 3144925 Nitrospirillum viridazoti Y2 strain=Y2 na latest Contig Major Full 2011-09-15 ASM22599v1 LNCC GCA_000225995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/225/995/GCF_000225995.1_ASM22599v1/ na assembly from type material na haploid bacteria 6318414 6318414 66.500000 0 1014 1014 NCBI RefSeq GCF_000225995.1-RS_2026_05_13 2026-05-13 6143 5875 58 21838888 GCF_000226035.2 PRJNA224116 SAMN02470956 na na 1081940 303 Pseudomonas putida B6-2 strain=B6-2 na latest Complete Genome Major Full 2016-05-06 ASM22603v3 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000226035.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/035/GCF_000226035.2_ASM22603v3/ na na na haploid bacteria 6377271 6377271 61.500000 1 1 1 NCBI RefSeq GCF_000226035.2-RS_2025_02_04 2025-02-04 5883 5570 110 22072645 GCF_000226095.1 PRJNA79339 SAMN00739435 na reference genome 573729 78579 Thermothelomyces thermophilus ATCC 42464 strain=ATCC 42464 na latest Complete Genome Major Full 2011-09-16 ASM22609v1 DOE Joint Genome Institute GCA_000226095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/095/GCF_000226095.1_ASM22609v1/ na na na haploid fungi 38744216 38744216 51.500000 7 7 7 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-09-19 9292 9097 192 21964414 GCF_000226115.1 PRJNA79337 SAMN02744067 na reference genome 578455 2587410 Thermothielavioides terrestris NRRL 8126 strain=NRRL 8126 na latest Complete Genome Major Full 2011-09-16 ASM22611v1 DOE Joint Genome Institute GCA_000226115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/115/GCF_000226115.1_ASM22611v1/ na na na haploid fungi 36912256 36912256 54.500000 6 6 6 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2019-11-29 9958 9802 152 21964414 GCF_000226155.1 PRJNA224116 SAMN02603849 na na 941193 287 Pseudomonas aeruginosa M18 strain=M18 na latest Complete Genome Major Full 2011-09-19 ASM22615v1 School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, PR China GCA_000226155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/155/GCF_000226155.1_ASM22615v1/ na na na haploid bacteria 6327754 6327754 66.500000 1 1 1 NCBI RefSeq GCF_000226155.1-RS_2025_02_04 2025-02-04 5885 5762 79 21884571 GCF_000226175.1 PRJNA224116 SAMN02471030 AFXX00000000.1 na 1074482 1685 Bifidobacterium breve DPC 6330 strain=DPC 6330 na latest Contig Major Full 2011-09-19 ASM22617v2 Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Rep. Ireland GCA_000226175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/175/GCF_000226175.1_ASM22617v2/ na na na haploid bacteria 2386233 2386233 58.500000 0 47 47 NCBI RefSeq GCF_000226175.1-RS_2026_03_20 2026-03-20 2147 1981 60 22072651 GCF_000226215.1 PRJNA224116 SAMN02470218 AGFF00000000.1 reference genome 1077144 665550 Dietzia alimentaria 72 strain=72 na latest Contig Major Full 2011-09-20 ASM22621v2 Kyung Hee University GCA_000226215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/215/GCF_000226215.1_ASM22621v2/ na assembly from type material na haploid bacteria 3352817 3352817 67.500000 0 39 39 NCBI RefSeq GCF_000226215.1-RS_2026_03_27 2026-03-27 3203 3107 56 22072646 GCF_000226235.1 PRJNA224116 SAMN02471148 AFYD00000000.1 na 1078018 47715 Lacticaseibacillus rhamnosus CASL strain=CASL na latest Scaffold Major Full 2011-09-23 ASM22623v1 The Institute of Microbiology, Chinese Academy of Sciences GCA_000226235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/235/GCF_000226235.1_ASM22623v1/ na na na haploid bacteria 2860691 2849911 46.500000 0 188 396 NCBI RefSeq GCF_000226235.1-RS_2025_09_10 2025-09-10 2797 2643 49 22123765 GCF_000226275.2 PRJNA224116 SAMN02603878 na na 497978 470 Acinetobacter baumannii MDR-ZJ06 strain=MDR-ZJ06 na latest Complete Genome Major Full 2018-10-16 ASM22627v2 State Key Laboratory of Diagnosis and Treatment for Infectious Disease, the First Affiliated Hospital, School of Medicine, Zhejiang University GCA_000226275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/275/GCF_000226275.2_ASM22627v2/ na na na haploid bacteria 4022275 4022275 39.000000 1 1 1 NCBI RefSeq GCF_000226275.2-RS_2025_12_26 2025-12-26 3890 3726 96 21788470 GCF_000226295.1 PRJNA224116 SAMN02603950 na reference genome 981222 458033 Chloracidobacterium thermophilum B strain=B na latest Complete Genome Major Full 2011-09-23 ASM22629v1 The Pennsylvania State University GCA_000226295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/295/GCF_000226295.1_ASM22629v1/ na assembly from type material na haploid bacteria 3695372 3695372 61.500000 2 2 2 NCBI RefSeq GCF_000226295.1-RS_2025_12_02 2025-12-02 3119 3035 55 21951563 GCF_000226315.1 PRJNA224116 SAMN02604252 na reference genome 856793 349221 Micavibrio aeruginosavorus ARL-13 strain=ARL-13 na latest Complete Genome Major Full 2011-09-23 ASM22631v1 University of Virginia, Department of Biology GCA_000226315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/315/GCF_000226315.1_ASM22631v1/ na na na haploid bacteria 2481983 2481983 54.500000 1 1 1 NCBI RefSeq GCF_000226315.1-RS_2025_12_09 2025-12-09 2367 2308 46 21936919 GCF_000226455.1 PRJNA224116 SAMN02471828 AGDE00000000.1 na 1079986 1969 Streptomyces chartreusis NRRL 12338 strain=NRRL 12338 na latest Scaffold Major Full 2011-09-30 ASM22645v1 US Dept of Agriculture, NCAUR-USDA GCA_000226455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/455/GCF_000226455.1_ASM22645v1/ na na na haploid bacteria 8893692 8860399 71.500000 0 89 299 NCBI RefSeq GCF_000226455.1-RS_2025_03_09 2025-03-09 8135 7818 64 22123769 GCF_000226475.1 PRJNA224116 SAMN02470932 AGFJ00000000.1 na 1079364 303 Pseudomonas putida str. Idaho strain=Idaho na latest Contig Major Full 2011-09-27 ASM22647v2 Shanghai Jiao Tong University GCA_000226475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/475/GCF_000226475.1_ASM22647v2/ na na na haploid bacteria 6363067 6363067 61.500000 0 839 839 NCBI RefSeq GCF_000226475.1-RS_2025_04_15 2025-04-15 6355 6028 51 22123764 GCF_000226495.2 PRJNA224116 SAMN02471993 AEWB00000000.2 na 985008 732 Aggregatibacter aphrophilus ATCC 33389 strain=ATCC 33389 na latest Contig Major Full 2015-07-31 ASM22649v3 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226495.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/495/GCF_000226495.2_ASM22649v3/ na assembly from type material na haploid bacteria 2267213 2267213 42.000000 0 48 48 NCBI RefSeq GCF_000226495.2-RS_2026_05_17 2026-05-17 2187 2057 59 na GCF_000226545.1 PRJNA29799 na na reference genome 515849 2587412 Podospora anserina S mat+ strain=S mat+ na latest Scaffold Major Full 2008-05-14 ASM22654v1 Genoscope - Centre National de Séquençage GCA_000226545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/545/GCF_000226545.1_ASM22654v1/ na na na haploid fungi 34718894 34250768 52.000000 7 33 1034 Genoscope - Centre National de Séquençage Annotation submitted by Genoscope - Centre National de Séquençage 2018-04-11 10527 10518 0 na GCF_000226565.1 PRJNA224116 SAMN02603857 na reference genome 1085623 300231 Brumicola nitratireducens FR1064 strain=FR1064 na latest Complete Genome Major Full 2011-09-28 ASM22656v1 Shandong University GCA_000226565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/565/GCF_000226565.1_ASM22656v1/ na assembly from type material na haploid bacteria 4134229 4134229 42.500000 1 1 1 NCBI RefSeq GCF_000226565.1-RS_2026_03_23 2026-03-23 3531 3438 70 22123761 GCF_000226605.1 PRJNA224116 SAMN02603770 na na 580047 813 Chlamydia trachomatis A2497 strain=A2497 na latest Complete Genome Major Full 2011-09-28 ASM22660v1 Rocky Mountain Laboratory GCA_000226605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/605/GCF_000226605.1_ASM22660v1/ na na na haploid bacteria 1051806 1051806 41.500000 2 2 2 NCBI RefSeq GCF_000226605.1-RS_2025_06_04 2025-06-04 956 889 46 21987657 GCF_000226625.1 PRJNA224116 SAMN02602982 na reference genome 1008459 84590 Taylorella asinigenitalis MCE3 strain=MCE3 na latest Complete Genome Major Full 2011-09-28 ASM22662v1 Anses GCA_000226625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/625/GCF_000226625.1_ASM22662v1/ na na na haploid bacteria 1638559 1638559 38.500000 1 1 1 NCBI RefSeq GCF_000226625.1-RS_2026_03_30 2026-03-30 1564 1499 50 22235352 GCF_000226715.2 PRJNA224116 SAMN02471947 AEJK00000000.2 na 907486 714 Aggregatibacter actinomycetemcomitans serotype a str. H5P1 strain=H5P1 na latest Scaffold Major Full 2015-07-30 AaH5P-1v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/715/GCF_000226715.2_AaH5P-1v2.0/ na na na haploid bacteria 2200508 2199125 44.500000 0 102 152 NCBI RefSeq GCF_000226715.2-RS_2026_02_01 2026-02-01 2217 2029 56 na GCF_000226735.2 PRJNA224116 SAMN02471942 AEJL00000000.2 na 907487 714 Aggregatibacter actinomycetemcomitans serotype d str. I63B strain=I63B na latest Scaffold Major Full 2015-08-17 AaI63Bv2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/735/GCF_000226735.2_AaI63Bv2.0/ na na na haploid bacteria 2222263 2197406 44.000000 0 134 142 NCBI RefSeq GCF_000226735.2-RS_2026_01_15 2026-01-15 2225 2039 58 23194436 GCF_000226755.1 PRJNA224116 SAMN02471943 AEJM00000000.1 na 907488 714 Aggregatibacter actinomycetemcomitans serotype e str. SC1083 strain=SC1083 na latest Contig Major Full 2011-09-29 ASM22675v2 University of Southern California School of Dentistry GCA_000226755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/755/GCF_000226755.1_ASM22675v2/ na na na haploid bacteria 2137435 2137435 44.500000 0 54 54 NCBI RefSeq GCF_000226755.1-RS_2026_01_15 2026-01-15 2114 1947 55 na GCF_000226775.2 PRJNA224116 SAMN02471949 AEJN00000000.2 na 907489 714 Aggregatibacter actinomycetemcomitans serotype e str. SCC393 strain=SCC393 na latest Scaffold Major Full 2015-08-17 AaSCC393v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/775/GCF_000226775.2_AaSCC393v2.0/ na na na haploid bacteria 2254042 2251087 44.500000 0 106 169 NCBI RefSeq GCF_000226775.2-RS_2026_04_29 2026-04-29 2304 2112 55 23194436 GCF_000226795.2 PRJNA224116 SAMN02471944 AEJO00000000.2 na 907490 714 Aggregatibacter actinomycetemcomitans serotype f str. D18P1 strain=D18P1 na latest Scaffold Major Full 2015-08-17 AaD18P-1v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226795.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/795/GCF_000226795.2_AaD18P-1v2.0/ na na na haploid bacteria 2266108 2256557 44.000000 0 114 116 NCBI RefSeq GCF_000226795.2-RS_2026_03_29 2026-03-29 2266 2070 58 23194436 GCF_000226815.2 PRJNA224116 SAMN02471948 AEJP00000000.2 na 907491 714 Aggregatibacter actinomycetemcomitans serotype b str. SCC1398 strain=SCC1398 na latest Scaffold Major Full 2015-07-30 AaSCC1398v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226815.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/815/GCF_000226815.2_AaSCC1398v2.0/ na na na haploid bacteria 2042853 2041759 44.500000 0 34 57 NCBI RefSeq GCF_000226815.2-RS_2025_12_19 2025-12-19 2076 1885 57 23194436 GCF_000226835.2 PRJNA224116 SAMN02471945 AEJQ00000000.2 na 907492 714 Aggregatibacter actinomycetemcomitans serotype b str. I23C strain=I23C na latest Scaffold Major Full 2015-08-17 AaI23Cv2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226835.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/835/GCF_000226835.2_AaI23Cv2.0/ na na na haploid bacteria 2112113 2105899 44.500000 0 30 55 NCBI RefSeq GCF_000226835.2-RS_2026_01_15 2026-01-15 2107 1940 55 23194436 GCF_000226855.2 PRJNA224116 SAMN02471946 AEJR00000000.2 na 907493 714 Aggregatibacter actinomycetemcomitans serotype c str. SCC2302 strain=SCC2302 na latest Scaffold Major Full 2015-08-17 AaSCC2302v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000226855.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/855/GCF_000226855.2_AaSCC2302v2.0/ na na na haploid bacteria 2034590 2034045 44.500000 0 26 42 NCBI RefSeq GCF_000226855.2-RS_2026_01_15 2026-01-15 2015 1844 54 23194436 GCF_000226875.1 PRJNA224116 SAMN02299457 AGAY00000000.1 na 1032488 607712 Neisseria shayeganii 871 strain=871 na latest Scaffold Major Full 2011-10-03 ASM22687v1 Baylor College of Medicine GCA_000226875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/875/GCF_000226875.1_ASM22687v1/ na assembly from type material na haploid bacteria 2354550 2292837 58.000000 0 26 111 NCBI RefSeq GCF_000226875.1-RS_2026_02_14 2026-02-14 2442 2239 51 na GCF_000226955.1 PRJNA224116 SAMN02470957 AGFU00000000.1 reference genome 1081640 179878 Sphingomonas elodea ATCC 31461 strain=ATCC 31461 na latest Contig Major Full 2011-09-30 ASM22695v2 Shanghai Jiao Tong University GCA_000226955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/955/GCF_000226955.1_ASM22695v2/ na na na haploid bacteria 4124388 4124388 67.500000 0 127 127 NCBI RefSeq GCF_000226955.1-RS_2026_03_20 2026-03-20 3972 3845 53 22123766 GCF_000226975.2 PRJNA224116 SAMN02470038 na reference genome 358396 229731 Natronobacterium lacisalsi AJ5 strain=AJ5 na latest Complete Genome Major Full 2017-01-23 ASM22697v3 College of Life Sciences, Zhejiang University GCA_000226975.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/226/975/GCF_000226975.2_ASM22697v3/ na assembly from type material na haploid archaea 4381543 4381543 65.500000 3 3 3 NCBI RefSeq GCF_000226975.2-RS_2025_11_20 2025-11-20 4304 4140 61 22123770 GCF_000227115.2 PRJNA79341 SAMEA2272418 na reference genome 1071378 27289 Naumovozyma dairenensis CBS 421 strain=type strain:CBS 421 na latest Chromosome Major Full 2012-08-20 ASM22711v2 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000227115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/115/GCF_000227115.2_ASM22711v2/ na assembly from type material na haploid fungi 13527580 13485324 34.000000 11 11 279 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5814 5546 268 22123960 GCF_000227175.1 PRJNA224116 SAMN02603751 na na 1087453 1719 Corynebacterium pseudotuberculosis 42/02-A strain=42/02-A na latest Complete Genome Major Full 2011-10-03 ASM22717v1 Rede Paraense de Genomica e Proteomica GCA_000227175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/175/GCF_000227175.1_ASM22717v1/ na na na haploid bacteria 2337606 2337606 52.000000 1 1 1 NCBI RefSeq GCF_000227175.1-RS_2026_03_27 2026-03-27 2126 2004 63 22887652 GCF_000227215.1 PRJNA224116 SAMN02469801 AFOH00000000.1 na 637390 930 Acidithiobacillus thiooxidans ATCC 19377 strain=ATCC 19377 na latest Contig Major Full 2011-10-03 ASM22721v2 Center for Bioinformatics and Genome Biology GCA_000227215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/215/GCF_000227215.1_ASM22721v2/ na assembly from type material na haploid bacteria 3019868 3019868 53.000000 0 164 164 NCBI RefSeq GCF_000227215.1-RS_2026_03_27 2026-03-27 3164 3011 52 22123759 GCF_000227255.2 PRJNA224116 SAMN02463777 ACTT00000000.2 na 658080 658080 Ralstonia sp. 5_2_56FAA strain=5_2_56FAA na latest Scaffold Major Full 2012-09-18 Ralstonia_sp_5_2_56FAA_V2 Broad Institute GCA_000227255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/255/GCF_000227255.2_Ralstonia_sp_5_2_56FAA_V2/ na na na haploid bacteria 5254771 5243971 63.500000 0 17 29 NCBI RefSeq GCF_000227255.2-RS_2025_08_25 2025-08-25 4972 4822 78 na GCF_000227275.1 PRJNA224116 SAMN02463802 ACWS00000000.1 na 665946 665946 Neisseria sp. GT4A_CT1 strain=GT4A_CT1 na latest Scaffold Major Full 2011-10-04 Neisseria_sp_GT4A_CT1_V1 Broad Institute GCA_000227275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/275/GCF_000227275.1_Neisseria_sp_GT4A_CT1_V1/ na na na haploid bacteria 2739136 2695361 51.000000 0 37 151 NCBI RefSeq GCF_000227275.1-RS_2024_06_10 2024-06-10 2698 2444 65 na GCF_000227295.1 PRJNA224116 SAMN02299449 AGBA00000000.1 na 997355 33010 Cutibacterium avidum ATCC 25577 strain=ATCC 25577 na latest Scaffold Major Full 2011-10-04 ASM22729v1 Baylor College of Medicine GCA_000227295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/295/GCF_000227295.1_ASM22729v1/ na assembly from type material na haploid bacteria 2553960 2533496 63.500000 0 7 24 NCBI RefSeq GCF_000227295.1-RS_2025_08_21 2025-08-21 2335 2220 52 na GCF_000227315.1 PRJNA224116 SAMN02299448 AGBB00000000.1 na 997350 33030 Peptoniphilus indolicus ATCC 29427 strain=ATCC 29427 na latest Scaffold Major Full 2011-10-04 ASM22731v1 Baylor College of Medicine GCA_000227315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/315/GCF_000227315.1_ASM22731v1/ na assembly from type material na haploid bacteria 2237864 2101630 31.500000 0 98 302 NCBI RefSeq GCF_000227315.1-RS_2025_08_21 2025-08-21 2229 2097 34 na GCF_000227355.1 PRJNA224116 SAMN02469898 AGFP00000000.1 na 1048830 2116 Malacoplasma iowae 695 strain=695 na latest Contig Major Full 2011-10-04 ASM22735v1 Huazhong Agricultural University GCA_000227355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/355/GCF_000227355.1_ASM22735v1/ na assembly from type material na haploid bacteria 1195147 1195147 24.500000 0 70 70 NCBI RefSeq GCF_000227355.1-RS_2026_01_14 2026-01-14 984 938 35 22207750 GCF_000227465.1 PRJNA224116 SAMN02603352 na reference genome 1052585 96241 Bacillus spizizenii TU-B-10 strain=TU-B-10 na latest Complete Genome Major Full 2011-10-05 ASM22746v1 Institute for Genome Sciences GCA_000227465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/465/GCF_000227465.1_ASM22746v1/ na assembly from type material na haploid bacteria 4207222 4207222 44.000000 1 1 1 NCBI RefSeq GCF_000227465.1-RS_2025_09_13 2025-09-13 4301 4052 127 22493193 GCF_000227485.1 PRJNA224116 SAMN02603351 na na 1052588 1423 Bacillus subtilis subsp. subtilis str. RO-NN-1 strain=RO-NN-1 na latest Complete Genome Major Full 2011-10-05 ASM22748v1 Institute for Genome Sciences GCA_000227485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/485/GCF_000227485.1_ASM22748v1/ na na na haploid bacteria 4011949 4011949 44.000000 1 1 1 NCBI RefSeq GCF_000227485.1-RS_2025_06_27 2025-06-27 4134 3893 121 22493193 GCF_000227545.1 PRJNA224116 SAMEA2272340 CADR00000000.1 na 940284 33995 Komagataeibacter europaeus LMG 18494 strain=LMG 18494 V3 latest Scaffold Major Full 2011-04-01 ASM22754v1 Vital-IT - Swiss Institute of Bioinformatics GCA_000227545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/545/GCF_000227545.1_ASM22754v1/ na na na haploid bacteria 3991281 3990723 61.000000 0 216 239 NCBI RefSeq GCF_000227545.1-RS_2025_12_15 2025-12-15 3981 3712 93 na GCF_000227565.1 PRJNA224116 SAMEA2272725 CADT00000000.1 na 940286 65958 Komagataeibacter oboediens 174Bp2 strain=174Bp2 na latest Scaffold Major Full 2011-04-01 ASM22756v1 Vital-IT - Swiss Institute of Bioinformatics GCA_000227565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/565/GCF_000227565.1_ASM22756v1/ na na na haploid bacteria 4181473 4180958 61.500000 0 200 221 NCBI RefSeq GCF_000227565.1-RS_2025_12_15 2025-12-15 4099 3846 101 na GCF_000227585.1 PRJNA224116 SAMEA2272654 CAFB00000000.1 reference genome 1070319 132144 Candidatus Glomeribacter gigasporarum BEG34 strain=BEG34 na latest Scaffold Major Full 2011-09-27 ASM22758v1 Consiglio Nazionale delle Ricerche (CNR) GCA_000227585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/585/GCF_000227585.1_ASM22758v1/ na na na haploid bacteria 1726950 1726737 55.000000 0 124 128 NCBI RefSeq GCF_000227585.1-RS_2026_03_31 2026-03-31 1989 1788 43 na GCF_000227605.3 PRJNA224116 SAMN02603742 na na 935697 1719 Corynebacterium pseudotuberculosis CIP 52.97 strain=CIP 52.97 na latest Complete Genome Major Full 2019-12-13 ASM22760v3 Rede Paraense de Genômica e Proteômica GCA_000227605.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/605/GCF_000227605.3_ASM22760v3/ na na na haploid bacteria 2369131 2369131 52.000000 1 1 1 NCBI RefSeq GCF_000227605.3-RS_2026_04_16 2026-04-16 2162 2062 65 22123771;31705053 GCF_000227625.1 PRJNA224116 SAMN02603406 na na 1072459 562 Escherichia coli O7:K1 str. CE10 strain=CE10 na latest Complete Genome Major Full 2011-10-06 ASM22762v1 Institute of Pathogen Biology, CAMS&PUMC GCA_000227625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/625/GCF_000227625.1_ASM22762v1/ na na na haploid bacteria 5378729 5378729 50.500000 5 5 5 NCBI RefSeq GCF_000227625.1-RS_2025_06_09 2025-06-09 5317 4926 120 22123760 GCF_000227645.1 PRJNA224116 SAMN02603116 na na 1029825 29459 Brucella melitensis NI strain=NI na latest Complete Genome Major Full 2011-10-06 ASM22764v1 China Agricultrual University GCA_000227645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/645/GCF_000227645.1_ASM22764v1/ na na na haploid bacteria 3294475 3294475 57.000000 2 2 2 NCBI RefSeq GCF_000227645.1-RS_2026_04_04 2026-04-04 3231 2974 67 23105063 GCF_000227665.2 PRJNA224116 SAMN02256538 na reference genome 717772 92245 Thiomicrospira aerophila AL3 strain=AL3 na latest Complete Genome Major Full 2014-01-03 ASM22766v3 DOE Joint Genome Institute GCA_000227665.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/665/GCF_000227665.2_ASM22766v3/ na assembly from type material na haploid bacteria 2158359 2158359 46.000000 1 1 1 NCBI RefSeq GCF_000227665.2-RS_2025_12_10 2025-12-10 2107 2050 50 na GCF_000227685.2 PRJNA224116 SAMN02256529 na reference genome 713585 108010 Thioalkalivibrio paradoxus ARh 1 strain=ARh 1 na latest Complete Genome Major Full 2014-01-03 ASM22768v3 DOE Joint Genome Institute GCA_000227685.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/685/GCF_000227685.2_ASM22768v3/ na assembly from type material na haploid bacteria 3756729 3756729 66.500000 1 1 1 NCBI RefSeq GCF_000227685.2-RS_2025_12_13 2025-12-13 3550 3406 53 na GCF_000227705.2 PRJNA224116 SAMN02261378 na reference genome 717605 377615 Thermobacillus composti KWC4 strain=KWC4 na latest Complete Genome Major Full 2012-12-18 ASM22770v3 JGI GCA_000227705.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/705/GCF_000227705.2_ASM22770v3/ na assembly from type material na haploid bacteria 4355525 4355525 60.000000 2 2 2 NCBI RefSeq GCF_000227705.2-RS_2025_12_13 2025-12-13 4116 3912 78 na GCF_000227725.2 PRJNA224116 SAMN02441807 AGFD00000000.2 reference genome 765914 154347 Thiorhodospira sibirica ATCC 700588 strain=ATCC 700588 na latest Scaffold Major Full 2021-08-18 ASM22772v3 DOE Joint Genome Institute GCA_000227725.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/725/GCF_000227725.2_ASM22772v3/ na assembly from type material na haploid bacteria 3196878 3188578 57.000000 0 5 88 NCBI RefSeq GCF_000227725.2-RS_2026_03_08 2026-03-08 2939 2746 52 na GCF_000227745.2 PRJNA224116 SAMN02232062 na reference genome 765911 73141 Thiocystis violascens DSM 198 strain=DSM 198 na latest Complete Genome Major Full 2012-06-08 ASM22774v3 DOE Joint Genome Institute GCA_000227745.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/745/GCF_000227745.2_ASM22774v3/ na assembly from type material na haploid bacteria 5017071 5017071 62.500000 1 1 1 NCBI RefSeq GCF_000227745.2-RS_2026_05_01 2026-05-01 4649 4464 66 na GCF_000227765.1 PRJNA224116 SAMN02299456 AGAZ00000000.1 na 1030841 607711 Neisseria wadsworthii 9715 strain=9715 na latest Scaffold Major Full 2011-10-06 ASM22776v1 Baylor College of Medicine GCA_000227765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/765/GCF_000227765.1_ASM22776v1/ na assembly from type material na haploid bacteria 2467075 2405905 48.500000 0 16 95 NCBI RefSeq GCF_000227765.1-RS_2025_08_21 2025-08-21 2332 2245 51 na GCF_000227785.1 PRJNA224116 SAMN02436626 AGGB00000000.1 na 1074052 1310 Streptococcus sobrinus TCI-9 strain=TCI-9 na latest Contig Major Full 2011-10-06 SMUT1-NEX_1-9 JCVI GCA_000227785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/785/GCF_000227785.1_SMUT1-NEX_1-9/ na na na haploid bacteria 2104944 2104944 43.500000 0 455 455 NCBI RefSeq GCF_000227785.1-RS_2025_07_30 2025-07-30 2265 2041 26 na GCF_000227805.1 PRJNA224116 SAMN02436627 AGGC00000000.1 na 1074053 1310 Streptococcus sobrinus TCI-13 strain=TCI-13 na latest Contig Major Full 2011-10-06 SMUT1-NEX_2-13 JCVI GCA_000227805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/805/GCF_000227805.1_SMUT1-NEX_2-13/ na na na haploid bacteria 2053482 2053482 43.500000 0 292 292 NCBI RefSeq GCF_000227805.1-RS_2025_07_30 2025-07-30 2122 1941 28 na GCF_000227825.1 PRJNA224116 SAMN02436615 AGGD00000000.1 na 1074054 1310 Streptococcus sobrinus TCI-16 strain=TCI-16 na latest Contig Major Full 2011-10-06 SMUT1-NEX_3-16 JCVI GCA_000227825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/825/GCF_000227825.1_SMUT1-NEX_3-16/ na na na haploid bacteria 2064151 2064151 43.500000 0 455 455 NCBI RefSeq GCF_000227825.1-RS_2025_07_30 2025-07-30 2260 2021 35 na GCF_000227845.1 PRJNA224116 SAMN02436616 AGGE00000000.1 na 1074055 1310 Streptococcus sobrinus TCI-28 strain=TCI-28 na latest Contig Major Full 2011-10-06 SMUT1-NEX_4-28 JCVI GCA_000227845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/845/GCF_000227845.1_SMUT1-NEX_4-28/ na na na haploid bacteria 2129348 2129348 43.500000 0 684 684 NCBI RefSeq GCF_000227845.1-RS_2025_07_31 2025-07-31 2420 2149 43 na GCF_000227865.1 PRJNA224116 SAMN02436532 AGGF00000000.1 na 1074056 1310 Streptococcus sobrinus TCI-50 strain=TCI-50 na latest Contig Major Full 2011-10-06 SMUT1-NEX_5-50 JCVI GCA_000227865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/865/GCF_000227865.1_SMUT1-NEX_5-50/ na na na haploid bacteria 2077138 2077138 43.500000 0 366 366 NCBI RefSeq GCF_000227865.1-RS_2025_07_30 2025-07-30 2225 2017 34 na GCF_000227885.1 PRJNA224116 SAMN02436617 AGGG00000000.1 na 1074057 1310 Streptococcus sobrinus TCI-53 strain=TCI-53 na latest Contig Major Full 2011-10-06 SMUT1-NEX_6-53 JCVI GCA_000227885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/885/GCF_000227885.1_SMUT1-NEX_6-53/ na na na haploid bacteria 2072818 2072818 43.500000 0 359 359 NCBI RefSeq GCF_000227885.1-RS_2025_07_30 2025-07-30 2190 1976 36 na GCF_000227905.1 PRJNA224116 SAMN02436618 AGGH00000000.1 na 1074058 1310 Streptococcus sobrinus TCI-54 strain=TCI-54 na latest Contig Major Full 2011-10-06 SMUT1-NEX_7-54 JCVI GCA_000227905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/905/GCF_000227905.1_SMUT1-NEX_7-54/ na na na haploid bacteria 2088764 2088764 43.500000 0 422 422 NCBI RefSeq GCF_000227905.1-RS_2025_07_30 2025-07-30 2253 2034 40 na GCF_000227925.1 PRJNA224116 SAMN02436533 AGGI00000000.1 na 1074059 1310 Streptococcus sobrinus TCI-56 strain=TCI-56 na latest Contig Major Full 2011-10-06 SMUT1-NEX_8-56 JCVI GCA_000227925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/925/GCF_000227925.1_SMUT1-NEX_8-56/ na na na haploid bacteria 2075737 2075737 43.500000 0 372 372 NCBI RefSeq GCF_000227925.1-RS_2025_07_30 2025-07-30 2199 2010 29 na GCF_000227945.1 PRJNA224116 SAMN02436339 AGGJ00000000.1 na 1074060 1310 Streptococcus sobrinus TCI-61 strain=TCI-61 na latest Contig Major Full 2011-10-06 SMUT1-NEX_9-61 JCVI GCA_000227945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/945/GCF_000227945.1_SMUT1-NEX_9-61/ na na na haploid bacteria 2144742 2144742 43.500000 0 336 336 NCBI RefSeq GCF_000227945.1-RS_2025_07_30 2025-07-30 2251 2001 38 na GCF_000227965.1 PRJNA224116 SAMN02436619 AGGK00000000.1 na 1074061 1310 Streptococcus sobrinus TCI-77 strain=TCI-77 na latest Contig Major Full 2011-10-06 SMUT1-NEX_10-77 JCVI GCA_000227965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/965/GCF_000227965.1_SMUT1-NEX_10-77/ na na na haploid bacteria 2106508 2106508 43.500000 0 258 258 NCBI RefSeq GCF_000227965.1-RS_2025_07_30 2025-07-30 2166 1978 42 na GCF_000227985.1 PRJNA224116 SAMN02436460 AGGL00000000.1 na 1074062 1310 Streptococcus sobrinus TCI-79 strain=TCI-79 na latest Contig Major Full 2011-10-06 SMUT1-NEX_11-79 JCVI GCA_000227985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/227/985/GCF_000227985.1_SMUT1-NEX_11-79/ na na na haploid bacteria 2114540 2114540 43.500000 0 247 247 NCBI RefSeq GCF_000227985.1-RS_2025_07_30 2025-07-30 2163 1977 41 na GCF_000228005.1 PRJNA224116 SAMN02436340 AGGM00000000.1 na 1074063 1310 Streptococcus sobrinus TCI-80 strain=TCI-80 na latest Contig Major Full 2011-10-06 SMUT1-NEX_12-80 JCVI GCA_000228005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/005/GCF_000228005.1_SMUT1-NEX_12-80/ na na na haploid bacteria 1996281 1996281 43.500000 0 414 414 NCBI RefSeq GCF_000228005.1-RS_2025_07_30 2025-07-30 2148 1918 36 na GCF_000228025.1 PRJNA224116 SAMN02436620 AGGN00000000.1 na 1074064 1310 Streptococcus sobrinus TCI-89 strain=TCI-89 na latest Contig Major Full 2011-10-06 SMUT1-NEX_21-89 JCVI GCA_000228025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/025/GCF_000228025.1_SMUT1-NEX_21-89/ na na na haploid bacteria 2115483 2115483 43.500000 0 322 322 NCBI RefSeq GCF_000228025.1-RS_2025_07_30 2025-07-30 2228 2046 36 na GCF_000228045.1 PRJNA224116 SAMN02436341 AGGO00000000.1 na 1074065 1310 Streptococcus sobrinus TCI-98 strain=TCI-98 na latest Contig Major Full 2011-10-06 SMUT1-NEX_25-98 JCVI GCA_000228045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/045/GCF_000228045.1_SMUT1-NEX_25-98/ na na na haploid bacteria 2170496 2170496 43.000000 0 595 595 NCBI RefSeq GCF_000228045.1-RS_2025_07_31 2025-07-31 2419 2181 47 na GCF_000228065.1 PRJNA224116 SAMN02436342 AGGP00000000.1 na 1074066 1310 Streptococcus sobrinus TCI-107 strain=TCI-107 na latest Contig Major Full 2011-10-06 SMUT1-NEX_34-107 JCVI GCA_000228065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/065/GCF_000228065.1_SMUT1-NEX_34-107/ na na na haploid bacteria 2136893 2136893 43.500000 0 283 283 NCBI RefSeq GCF_000228065.1-RS_2025_07_30 2025-07-30 2205 2052 34 na GCF_000228085.1 PRJNA224116 SAMN02436621 AGGQ00000000.1 na 1074067 1310 Streptococcus sobrinus TCI-119 strain=TCI-119 na latest Contig Major Full 2011-10-06 SMUT1-NEX_50-119 JCVI GCA_000228085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/085/GCF_000228085.1_SMUT1-NEX_50-119/ na na na haploid bacteria 2083613 2083613 43.500000 0 398 398 NCBI RefSeq GCF_000228085.1-RS_2025_07_30 2025-07-30 2236 2021 37 na GCF_000228125.1 PRJNA224116 SAMN02436461 AGGS00000000.1 na 1074069 1310 Streptococcus sobrinus TCI-124 strain=TCI-124 na latest Contig Major Full 2011-10-06 SMUT1-NEX_62-124 JCVI GCA_000228125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/125/GCF_000228125.1_SMUT1-NEX_62-124/ na na na haploid bacteria 2076686 2076686 43.500000 0 255 255 NCBI RefSeq GCF_000228125.1-RS_2025_07_30 2025-07-30 2154 1974 38 na GCF_000228145.1 PRJNA224116 SAMN02436462 AGGT00000000.1 na 1074070 1310 Streptococcus sobrinus TCI-342 strain=TCI-342 na latest Contig Major Full 2011-10-06 SMUT1-NEX_78-342 JCVI GCA_000228145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/145/GCF_000228145.1_SMUT1-NEX_78-342/ na na na haploid bacteria 2196447 2196447 43.500000 0 510 510 NCBI RefSeq GCF_000228145.1-RS_2025_07_30 2025-07-30 2413 2141 32 na GCF_000228165.1 PRJNA224116 SAMN02436534 AGGU00000000.1 na 1074071 1310 Streptococcus sobrinus TCI-345 strain=TCI-345 na latest Contig Major Full 2011-10-06 SMUT1-NEX_93-345 JCVI GCA_000228165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/165/GCF_000228165.1_SMUT1-NEX_93-345/ na na na haploid bacteria 2217583 2217583 43.500000 0 456 456 NCBI RefSeq GCF_000228165.1-RS_2025_07_30 2025-07-30 2400 2132 49 na GCF_000228225.1 PRJNA224116 SAMN02436464 AGGX00000000.1 na 1074074 1310 Streptococcus sobrinus TCI-352 strain=TCI-352 na latest Contig Major Full 2011-10-06 SMUT2-NEX_3-352 JCVI GCA_000228225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/225/GCF_000228225.1_SMUT2-NEX_3-352/ na na na haploid bacteria 2098803 2098803 43.500000 0 355 355 NCBI RefSeq GCF_000228225.1-RS_2025_07_30 2025-07-30 2213 2009 28 na GCF_000228245.1 PRJNA224116 SAMN02436536 AGGY00000000.1 na 1074076 1310 Streptococcus sobrinus TCI-355 strain=TCI-355 na latest Contig Major Full 2011-10-06 SMUT2-NEX_5-355 JCVI GCA_000228245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/245/GCF_000228245.1_SMUT2-NEX_5-355/ na na na haploid bacteria 2070349 2070349 43.500000 0 227 227 NCBI RefSeq GCF_000228245.1-RS_2025_07_30 2025-07-30 2079 1907 40 na GCF_000228265.1 PRJNA224116 SAMN02436456 AGGZ00000000.1 na 1074077 1310 Streptococcus sobrinus TCI-357 strain=TCI-357 na latest Contig Major Full 2011-10-06 SMUT2-NEX_6-357 JCVI GCA_000228265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/265/GCF_000228265.1_SMUT2-NEX_6-357/ na na na haploid bacteria 2094807 2094807 43.500000 0 220 220 NCBI RefSeq GCF_000228265.1-RS_2026_04_02 2026-04-02 2113 1957 30 na GCF_000228285.1 PRJNA224116 SAMN02436537 AGHA00000000.1 na 1074078 1310 Streptococcus sobrinus TCI-363 strain=TCI-363 na latest Contig Major Full 2011-10-06 SMUT2-NEX_7-363 JCVI GCA_000228285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/285/GCF_000228285.1_SMUT2-NEX_7-363/ na na na haploid bacteria 2130636 2130636 43.500000 0 356 356 NCBI RefSeq GCF_000228285.1-RS_2025_07_30 2025-07-30 2234 2026 32 na GCF_000228305.1 PRJNA224116 SAMN02436538 AGHB00000000.1 na 1074079 1310 Streptococcus sobrinus TCI-366 strain=TCI-366 na latest Contig Major Full 2011-10-06 SMUT2-NEX_8-366 JCVI GCA_000228305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/305/GCF_000228305.1_SMUT2-NEX_8-366/ na na na haploid bacteria 2070376 2070376 43.500000 0 298 298 NCBI RefSeq GCF_000228305.1-RS_2025_07_30 2025-07-30 2124 1931 34 na GCF_000228325.1 PRJNA224116 SAMN02436539 AGHC00000000.1 na 1074080 1310 Streptococcus sobrinus TCI-367 strain=TCI-367 na latest Contig Major Full 2011-10-06 SMUT2-NEX_9-367 JCVI GCA_000228325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/325/GCF_000228325.1_SMUT2-NEX_9-367/ na na na haploid bacteria 2120086 2120086 43.500000 0 325 325 NCBI RefSeq GCF_000228325.1-RS_2025_07_30 2025-07-30 2180 1980 41 na GCF_000228345.1 PRJNA224116 SAMN02436343 AGHD00000000.1 na 1074081 1310 Streptococcus sobrinus TCI-373 strain=TCI-373 na latest Contig Major Full 2011-10-06 SMUT2-NEX_10-373 JCVI GCA_000228345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/345/GCF_000228345.1_SMUT2-NEX_10-373/ na na na haploid bacteria 2060591 2060591 43.500000 0 320 320 NCBI RefSeq GCF_000228345.1-RS_2025_07_30 2025-07-30 2125 1951 32 na GCF_000228405.1 PRJNA224116 SAMN02436622 AGHG00000000.1 na 1074084 1310 Streptococcus sobrinus TCI-377 strain=TCI-377 na latest Contig Major Full 2011-10-06 SMUT2-NEX_21-377 JCVI GCA_000228405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/405/GCF_000228405.1_SMUT2-NEX_21-377/ na na na haploid bacteria 2144771 2144771 43.500000 0 384 384 NCBI RefSeq GCF_000228405.1-RS_2025_07_30 2025-07-30 2291 2070 39 na GCF_000228425.1 PRJNA224116 SAMN02436623 AGHH00000000.1 na 1074085 1310 Streptococcus sobrinus TCI-381 strain=TCI-381 na latest Contig Major Full 2011-10-06 SMUT2-NEX_25-381 JCVI GCA_000228425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/425/GCF_000228425.1_SMUT2-NEX_25-381/ na na na haploid bacteria 2128118 2128118 43.500000 0 396 396 NCBI RefSeq GCF_000228425.1-RS_2025_07_30 2025-07-30 2251 2047 35 na GCF_000228445.1 PRJNA224116 SAMN02436624 AGHI00000000.1 na 1074086 1310 Streptococcus sobrinus TCI-384 strain=TCI-384 na latest Contig Major Full 2011-10-06 SMUT2-NEX_34-384 JCVI GCA_000228445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/445/GCF_000228445.1_SMUT2-NEX_34-384/ na na na haploid bacteria 2125481 2125481 43.500000 0 196 196 NCBI RefSeq GCF_000228445.1-RS_2025_07_30 2025-07-30 2132 1970 36 na GCF_000228465.1 PRJNA224116 SAMN02436541 AGHJ00000000.1 na 1074088 1310 Streptococcus sobrinus TCI-392 strain=TCI-392 na latest Contig Major Full 2011-10-06 SMUT2-NEX_57-392 JCVI GCA_000228465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/465/GCF_000228465.1_SMUT2-NEX_57-392/ na na na haploid bacteria 2036293 2036293 43.500000 0 435 435 NCBI RefSeq GCF_000228465.1-RS_2025_07_30 2025-07-30 2205 1964 36 na GCF_000228485.1 PRJNA224116 SAMN02436344 AGHK00000000.1 na 1074089 1310 Streptococcus sobrinus TCI-395 strain=TCI-395 na latest Contig Major Full 2011-10-06 SMUT2-NEX_62-395 JCVI GCA_000228485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/485/GCF_000228485.1_SMUT2-NEX_62-395/ na na na haploid bacteria 2038105 2038105 43.500000 0 379 379 NCBI RefSeq GCF_000228485.1-RS_2025_07_30 2025-07-30 2159 1963 31 na GCF_000228505.1 PRJNA224116 SAMN02436542 AGHL00000000.1 na 1074090 1310 Streptococcus sobrinus TCI-396 strain=TCI-396 na latest Contig Major Full 2011-10-06 SMUT2-NEX_78-396 JCVI GCA_000228505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/505/GCF_000228505.1_SMUT2-NEX_78-396/ na na na haploid bacteria 2087882 2087882 43.500000 0 306 306 NCBI RefSeq GCF_000228505.1-RS_2025_07_30 2025-07-30 2160 1970 32 na GCF_000228525.1 PRJNA224116 SAMN02436625 AGHM00000000.1 na 1074094 1310 Streptococcus sobrinus TCI-2 strain=TCI-2 na latest Contig Major Full 2011-10-06 SMUT3-NEX_3-2 JCVI GCA_000228525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/525/GCF_000228525.1_SMUT3-NEX_3-2/ na na na haploid bacteria 2141775 2141775 43.500000 0 401 401 NCBI RefSeq GCF_000228525.1-RS_2025_07_30 2025-07-30 2287 2077 35 na GCF_000228545.1 PRJNA224116 SAMN02436543 AGHN00000000.1 na 1074117 1310 Streptococcus sobrinus TCI-118 strain=TCI-118 na latest Contig Major Full 2011-10-06 SMUT4-NEX_6-118 JCVI GCA_000228545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/545/GCF_000228545.1_SMUT4-NEX_6-118/ na na na haploid bacteria 2107227 2107227 43.500000 0 224 224 NCBI RefSeq GCF_000228545.1-RS_2025_07_30 2025-07-30 2121 1952 41 na GCF_000228585.1 PRJNA224116 SAMN02436458 AGHP00000000.1 na 1074133 1310 Streptococcus sobrinus TCI-160 strain=TCI-160 na latest Contig Major Full 2011-10-06 SMUT5-NEX_2-160 JCVI GCA_000228585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/585/GCF_000228585.1_SMUT5-NEX_2-160/ na na na haploid bacteria 2081813 2081813 43.500000 0 351 351 NCBI RefSeq GCF_000228585.1-RS_2025_07_30 2025-07-30 2202 2007 39 na GCF_000228605.1 PRJNA224116 SAMN02436544 AGHQ00000000.1 na 1074139 1310 Streptococcus sobrinus TCI-172 strain=TCI-172 na latest Contig Major Full 2011-10-06 SMUT5-NEX_8-172 JCVI GCA_000228605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/605/GCF_000228605.1_SMUT5-NEX_8-172/ na na na haploid bacteria 2140387 2140387 43.500000 0 393 393 NCBI RefSeq GCF_000228605.1-RS_2025_07_30 2025-07-30 2303 2063 42 na GCF_000228625.1 PRJNA224116 SAMN02436459 AGHR00000000.1 na 1074142 1310 Streptococcus sobrinus TCI-175 strain=TCI-175 na latest Contig Major Full 2011-10-06 SMUT5-NEX_11-175 JCVI GCA_000228625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/625/GCF_000228625.1_SMUT5-NEX_11-175/ na na na haploid bacteria 2162719 2162719 43.500000 0 669 669 NCBI RefSeq GCF_000228625.1-RS_2025_07_31 2025-07-31 2536 2157 40 na GCF_000228665.1 PRJNA224116 SAMN02436529 AGHT00000000.1 na 1074152 1310 Streptococcus sobrinus TCI-200 strain=TCI-200 na latest Contig Major Full 2011-10-06 SMUT6-NEX_1-200 JCVI GCA_000228665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/665/GCF_000228665.1_SMUT6-NEX_1-200/ na na na haploid bacteria 2085681 2085681 43.500000 0 216 216 NCBI RefSeq GCF_000228665.1-RS_2025_07_30 2025-07-30 2114 1979 32 na GCF_000228685.1 PRJNA224116 SAMN02436530 AGHU00000000.1 na 1074158 1310 Streptococcus sobrinus TCI-215 strain=TCI-215 na latest Contig Major Full 2011-10-06 SMUT6-NEX_7-215 JCVI GCA_000228685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/685/GCF_000228685.1_SMUT6-NEX_7-215/ na na na haploid bacteria 2128961 2128961 43.500000 0 306 306 NCBI RefSeq GCF_000228685.1-RS_2025_07_30 2025-07-30 2205 2011 37 na GCF_000228725.2 PRJNA224116 SAMN02261404 AFWS00000000.2 na 631362 631362 Thiorhodovibrio frisius strain=970 na latest Scaffold Major Full 2012-03-23 ASM22872v3 JGI GCA_000228725.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/725/GCF_000228725.2_ASM22872v3/ na assembly from type material na haploid bacteria 5342862 5337762 60.000000 0 9 60 NCBI RefSeq GCF_000228725.2-RS_2025_11_24 2025-11-24 4919 4735 53 na GCF_000228745.1 PRJNA224116 SAMN02436614 AGKF00000000.1 na 1074113 1309 Streptococcus mutans TCI-101 strain=TCI-101 na latest Contig Major Full 2011-10-06 SMUT4-NEX_2-101 JCVI GCA_000228745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/745/GCF_000228745.1_SMUT4-NEX_2-101/ na na na haploid bacteria 1816188 1816188 37.000000 0 141 141 NCBI RefSeq GCF_000228745.1-RS_2025_07_30 2025-07-30 1856 1722 41 na GCF_000228765.1 PRJNA224116 SAMN02436443 AGKG00000000.1 na 1074114 1309 Streptococcus mutans TCI-109 strain=TCI-109 na latest Contig Major Full 2011-10-06 SMUT4-NEX_3-109 JCVI GCA_000228765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/765/GCF_000228765.1_SMUT4-NEX_3-109/ na na na haploid bacteria 1801671 1801671 37.000000 0 146 146 NCBI RefSeq GCF_000228765.1-RS_2025_07_30 2025-07-30 1828 1698 43 na GCF_000228785.1 PRJNA224116 SAMN02436346 AGKH00000000.1 na 1074095 1309 Streptococcus mutans TCI-11 strain=TCI-11 na latest Contig Major Full 2011-10-06 SMUT3-NEX_4-11 JCVI GCA_000228785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/785/GCF_000228785.1_SMUT3-NEX_4-11/ na na na haploid bacteria 1799918 1799918 37.000000 0 141 141 NCBI RefSeq GCF_000228785.1-RS_2025_07_30 2025-07-30 1820 1692 41 na GCF_000228805.1 PRJNA224116 SAMN02436598 AGKI00000000.1 na 1074115 1309 Streptococcus mutans TCI-110 strain=TCI-110 na latest Contig Major Full 2011-10-06 SMUT4-NEX_4-110 JCVI GCA_000228805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/805/GCF_000228805.1_SMUT4-NEX_4-110/ na na na haploid bacteria 1809107 1809107 37.000000 0 135 135 NCBI RefSeq GCF_000228805.1-RS_2025_07_30 2025-07-30 1840 1713 42 na GCF_000228825.1 PRJNA224116 SAMN02436347 AGKJ00000000.1 na 1074116 1309 Streptococcus mutans TCI-116 strain=TCI-116 na latest Contig Major Full 2011-10-06 SMUT4-NEX_5-116 JCVI GCA_000228825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/825/GCF_000228825.1_SMUT4-NEX_5-116/ na na na haploid bacteria 1929685 1929685 36.500000 0 60 60 NCBI RefSeq GCF_000228825.1-RS_2025_07_30 2025-07-30 1913 1797 42 na GCF_000228845.1 PRJNA224116 SAMN02436599 AGKK00000000.1 na 1074118 1309 Streptococcus mutans TCI-120 strain=TCI-120 na latest Contig Major Full 2011-10-06 SMUT4-NEX_7-120 JCVI GCA_000228845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/845/GCF_000228845.1_SMUT4-NEX_7-120/ na na na haploid bacteria 1776899 1776899 37.000000 0 159 159 NCBI RefSeq GCF_000228845.1-RS_2025_07_30 2025-07-30 1819 1677 40 na GCF_000228865.1 PRJNA224116 SAMN02436600 AGKL00000000.1 na 1074119 1309 Streptococcus mutans TCI-123 strain=TCI-123 na latest Contig Major Full 2011-10-06 SMUT4-NEX_8-123 JCVI GCA_000228865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/865/GCF_000228865.1_SMUT4-NEX_8-123/ na na na haploid bacteria 1890503 1890503 37.000000 0 109 109 NCBI RefSeq GCF_000228865.1-RS_2025_07_30 2025-07-30 1897 1776 42 na GCF_000228885.1 PRJNA224116 SAMN02436444 AGKM00000000.1 na 1074120 1309 Streptococcus mutans TCI-125 strain=TCI-125 na latest Contig Major Full 2011-10-06 SMUT4-NEX_9-125 JCVI GCA_000228885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/885/GCF_000228885.1_SMUT4-NEX_9-125/ na na na haploid bacteria 1861689 1861689 37.000000 0 96 96 NCBI RefSeq GCF_000228885.1-RS_2025_07_30 2025-07-30 1864 1748 43 na GCF_000228905.1 PRJNA224116 SAMN02436445 AGKN00000000.1 na 1074121 1309 Streptococcus mutans TCI-138 strain=TCI-138 na latest Contig Major Full 2011-10-06 SMUT4-NEX_10-138 JCVI GCA_000228905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/905/GCF_000228905.1_SMUT4-NEX_10-138/ na na na haploid bacteria 1805076 1805076 37.000000 0 131 131 NCBI RefSeq GCF_000228905.1-RS_2025_07_30 2025-07-30 1829 1708 41 na GCF_000228925.1 PRJNA224116 SAMN02436446 AGKO00000000.1 na 1074122 1309 Streptococcus mutans TCI-143 strain=TCI-143 na latest Contig Major Full 2011-10-06 SMUT4-NEX_11-143 JCVI GCA_000228925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/925/GCF_000228925.1_SMUT4-NEX_11-143/ na na na haploid bacteria 1776306 1776306 37.000000 0 157 157 NCBI RefSeq GCF_000228925.1-RS_2025_07_30 2025-07-30 1818 1676 41 na GCF_000228945.1 PRJNA224116 SAMN02436447 AGKP00000000.1 na 1074123 1309 Streptococcus mutans TCI-145 strain=TCI-145 na latest Contig Major Full 2011-10-06 SMUT4-NEX_12-145 JCVI GCA_000228945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/945/GCF_000228945.1_SMUT4-NEX_12-145/ na na na haploid bacteria 1877792 1877792 37.000000 0 99 99 NCBI RefSeq GCF_000228945.1-RS_2025_07_30 2025-07-30 1880 1754 43 na GCF_000228965.1 PRJNA224116 SAMN02436345 AGKE00000000.1 na 1074124 1309 Streptococcus mutans TCI-146 strain=TCI-146 na latest Contig Major Full 2011-10-06 SMUT4-NEX_21-146 JCVI GCA_000228965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/965/GCF_000228965.1_SMUT4-NEX_21-146/ na na na haploid bacteria 1785489 1785489 37.000000 0 143 143 NCBI RefSeq GCF_000228965.1-RS_2025_07_30 2025-07-30 1817 1686 41 na GCF_000228985.1 PRJNA224116 SAMN02436531 AGKQ00000000.1 na 1074125 1309 Streptococcus mutans TCI-148 strain=TCI-148 na latest Contig Major Full 2011-10-06 SMUT4-NEX_25-148 JCVI GCA_000228985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/228/985/GCF_000228985.1_SMUT4-NEX_25-148/ na na na haploid bacteria 1819408 1819408 37.000000 0 120 120 NCBI RefSeq GCF_000228985.1-RS_2025_07_30 2025-07-30 1837 1714 41 na GCF_000229005.1 PRJNA224116 SAMN02436512 AGKR00000000.1 na 1074126 1309 Streptococcus mutans TCI-149 strain=TCI-149 na latest Contig Major Full 2011-10-06 SMUT4-NEX_34-149 JCVI GCA_000229005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/005/GCF_000229005.1_SMUT4-NEX_34-149/ na na na haploid bacteria 1822635 1822635 37.000000 0 117 117 NCBI RefSeq GCF_000229005.1-RS_2025_07_30 2025-07-30 1838 1712 40 na GCF_000229025.1 PRJNA224116 SAMN02436601 AGKS00000000.1 na 1074127 1309 Streptococcus mutans TCI-151 strain=TCI-151 na latest Contig Major Full 2011-10-06 SMUT4-NEX_50-151 JCVI GCA_000229025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/025/GCF_000229025.1_SMUT4-NEX_50-151/ na na na haploid bacteria 1820468 1820468 37.000000 0 121 121 NCBI RefSeq GCF_000229025.1-RS_2025_07_30 2025-07-30 1838 1711 43 na GCF_000229045.1 PRJNA224116 SAMN02436602 AGKT00000000.1 na 1074128 1309 Streptococcus mutans TCI-152 strain=TCI-152 na latest Contig Major Full 2011-10-06 SMUT4-NEX_57-152 JCVI GCA_000229045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/045/GCF_000229045.1_SMUT4-NEX_57-152/ na na na haploid bacteria 1851396 1851396 37.000000 0 101 101 NCBI RefSeq GCF_000229045.1-RS_2025_07_30 2025-07-30 1852 1730 43 na GCF_000229065.1 PRJNA224116 SAMN02436348 AGKU00000000.1 na 1074129 1309 Streptococcus mutans TCI-153 strain=TCI-153 na latest Contig Major Full 2011-10-06 SMUT4-NEX_62-153 JCVI GCA_000229065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/065/GCF_000229065.1_SMUT4-NEX_62-153/ na na na haploid bacteria 1927654 1927654 36.500000 0 55 55 NCBI RefSeq GCF_000229065.1-RS_2025_07_30 2025-07-30 1919 1800 44 na GCF_000229085.1 PRJNA224116 SAMN02436448 AGKV00000000.1 na 1074130 1309 Streptococcus mutans TCI-154 strain=TCI-154 na latest Contig Major Full 2011-10-06 SMUT4-NEX_78-154 JCVI GCA_000229085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/085/GCF_000229085.1_SMUT4-NEX_78-154/ na na na haploid bacteria 1818945 1818945 37.000000 0 120 120 NCBI RefSeq GCF_000229085.1-RS_2025_07_30 2025-07-30 1831 1710 40 na GCF_000229105.1 PRJNA224116 SAMN02436603 AGKW00000000.1 na 1074134 1309 Streptococcus mutans TCI-162 strain=TCI-162 na latest Contig Major Full 2011-10-06 SMUT5-NEX_3-162 JCVI GCA_000229105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/105/GCF_000229105.1_SMUT5-NEX_3-162/ na na na haploid bacteria 1817871 1817871 37.000000 0 130 130 NCBI RefSeq GCF_000229105.1-RS_2025_07_30 2025-07-30 1842 1721 43 na GCF_000229125.1 PRJNA224116 SAMN02436449 AGKX00000000.1 na 1074135 1309 Streptococcus mutans TCI-163 strain=TCI-163 na latest Contig Major Full 2011-10-06 SMUT5-NEX_4-163 JCVI GCA_000229125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/125/GCF_000229125.1_SMUT5-NEX_4-163/ na na na haploid bacteria 1897877 1897877 37.000000 0 92 92 NCBI RefSeq GCF_000229125.1-RS_2025_07_30 2025-07-30 1904 1785 41 na GCF_000229145.1 PRJNA224116 SAMN02436604 AGKY00000000.1 na 1074136 1309 Streptococcus mutans TCI-164 strain=TCI-164 na latest Contig Major Full 2011-10-06 SMUT5-NEX_5-164 JCVI GCA_000229145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/145/GCF_000229145.1_SMUT5-NEX_5-164/ na na na haploid bacteria 1829200 1829200 37.000000 0 115 115 NCBI RefSeq GCF_000229145.1-RS_2025_07_30 2025-07-30 1848 1733 43 na GCF_000229165.1 PRJNA224116 SAMN02436349 AGKZ00000000.1 na 1074137 1309 Streptococcus mutans TCI-169 strain=TCI-169 na latest Contig Major Full 2011-10-06 SMUT5-NEX_6-169 JCVI GCA_000229165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/165/GCF_000229165.1_SMUT5-NEX_6-169/ na na na haploid bacteria 1927770 1927770 36.500000 0 59 59 NCBI RefSeq GCF_000229165.1-RS_2025_07_30 2025-07-30 1914 1790 45 na GCF_000229185.1 PRJNA224116 SAMN02436605 AGLA00000000.1 na 1074138 1309 Streptococcus mutans TCI-170 strain=TCI-170 na latest Contig Major Full 2011-10-06 SMUT5-NEX_7-170 JCVI GCA_000229185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/185/GCF_000229185.1_SMUT5-NEX_7-170/ na na na haploid bacteria 1899487 1899487 37.000000 0 86 86 NCBI RefSeq GCF_000229185.1-RS_2025_07_30 2025-07-30 1892 1771 42 na GCF_000229205.1 PRJNA224116 SAMN02436513 AGLB00000000.1 na 1074140 1309 Streptococcus mutans TCI-173 strain=TCI-173 na latest Contig Major Full 2011-10-06 SMUT5-NEX_9-173 JCVI GCA_000229205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/205/GCF_000229205.1_SMUT5-NEX_9-173/ na na na haploid bacteria 1872679 1872679 37.000000 0 112 112 NCBI RefSeq GCF_000229205.1-RS_2025_07_30 2025-07-30 1880 1762 44 na GCF_000229225.1 PRJNA224116 SAMN02436514 AGLC00000000.1 na 1074143 1309 Streptococcus mutans TCI-176 strain=TCI-176 na latest Contig Major Full 2011-10-06 SMUT5-NEX_12-176 JCVI GCA_000229225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/225/GCF_000229225.1_SMUT5-NEX_12-176/ na na na haploid bacteria 1794749 1794749 37.000000 0 128 128 NCBI RefSeq GCF_000229225.1-RS_2025_07_30 2025-07-30 1818 1701 42 na GCF_000229245.1 PRJNA224116 SAMN02436606 AGLD00000000.1 na 1074144 1309 Streptococcus mutans TCI-177 strain=TCI-177 na latest Contig Major Full 2011-10-06 SMUT5-NEX_21-177 JCVI GCA_000229245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/245/GCF_000229245.1_SMUT5-NEX_21-177/ na na na haploid bacteria 1882948 1882948 37.000000 0 110 110 NCBI RefSeq GCF_000229245.1-RS_2025_07_30 2025-07-30 1889 1760 43 na GCF_000229265.1 PRJNA224116 SAMN02436350 AGLE00000000.1 na 1074146 1309 Streptococcus mutans TCI-179 strain=TCI-179 na latest Contig Major Full 2011-10-06 SMUT5-NEX_34-179 JCVI GCA_000229265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/265/GCF_000229265.1_SMUT5-NEX_34-179/ na na na haploid bacteria 1818201 1818201 37.000000 0 126 126 NCBI RefSeq GCF_000229265.1-RS_2025_07_30 2025-07-30 1838 1721 43 na GCF_000229285.1 PRJNA224116 SAMN02436351 AGLF00000000.1 na 1074148 1309 Streptococcus mutans TCI-187 strain=TCI-187 na latest Contig Major Full 2011-10-06 SMUT5-NEX_57-187 JCVI GCA_000229285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/285/GCF_000229285.1_SMUT5-NEX_57-187/ na na na haploid bacteria 1765562 1765562 37.000000 0 127 127 NCBI RefSeq GCF_000229285.1-RS_2025_07_30 2025-07-30 1789 1654 39 na GCF_000229305.1 PRJNA224116 SAMN02436352 AGLG00000000.1 na 1074149 1309 Streptococcus mutans TCI-191 strain=TCI-191 na latest Contig Major Full 2011-10-06 SMUT5-NEX_62-191 JCVI GCA_000229305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/305/GCF_000229305.1_SMUT5-NEX_62-191/ na na na haploid bacteria 1832015 1832015 37.000000 0 120 120 NCBI RefSeq GCF_000229305.1-RS_2025_07_30 2025-07-30 1852 1728 43 na GCF_000229325.1 PRJNA224116 SAMN02436353 AGLH00000000.1 na 1074151 1309 Streptococcus mutans TCI-196 strain=TCI-196 na latest Contig Major Full 2011-10-06 SMUT5-NEX_93-196 JCVI GCA_000229325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/325/GCF_000229325.1_SMUT5-NEX_93-196/ na na na haploid bacteria 1898193 1898193 37.000000 0 90 90 NCBI RefSeq GCF_000229325.1-RS_2025_07_30 2025-07-30 1878 1759 41 na GCF_000229345.1 PRJNA224116 SAMN02436450 AGLI00000000.1 na 1074153 1309 Streptococcus mutans TCI-201 strain=TCI-201 na latest Contig Major Full 2011-10-06 SMUT6-NEX_2-201 JCVI GCA_000229345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/345/GCF_000229345.1_SMUT6-NEX_2-201/ na na na haploid bacteria 1770853 1770853 37.000000 0 146 146 NCBI RefSeq GCF_000229345.1-RS_2025_07_30 2025-07-30 1804 1678 42 na GCF_000229365.1 PRJNA224116 SAMN02436515 AGLJ00000000.1 na 1074154 1309 Streptococcus mutans TCI-202 strain=TCI-202 na latest Contig Major Full 2011-10-06 SMUT6-NEX_3-202 JCVI GCA_000229365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/365/GCF_000229365.1_SMUT6-NEX_3-202/ na na na haploid bacteria 1820309 1820309 37.000000 0 115 115 NCBI RefSeq GCF_000229365.1-RS_2025_07_30 2025-07-30 1842 1717 42 na GCF_000229385.1 PRJNA224116 SAMN02436354 AGLK00000000.1 na 1074155 1309 Streptococcus mutans TCI-204 strain=TCI-204 na latest Contig Major Full 2011-10-06 SMUT6-NEX_4-204 JCVI GCA_000229385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/385/GCF_000229385.1_SMUT6-NEX_4-204/ na na na haploid bacteria 1847156 1847156 37.000000 0 136 136 NCBI RefSeq GCF_000229385.1-RS_2025_07_30 2025-07-30 1886 1749 43 na GCF_000229405.1 PRJNA224116 SAMN02436451 AGLL00000000.1 na 1074156 1309 Streptococcus mutans TCI-210 strain=TCI-210 na latest Contig Major Full 2011-10-06 SMUT6-NEX_5-210 JCVI GCA_000229405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/405/GCF_000229405.1_SMUT6-NEX_5-210/ na na na haploid bacteria 1809350 1809350 37.000000 0 135 135 NCBI RefSeq GCF_000229405.1-RS_2025_07_30 2025-07-30 1836 1702 43 na GCF_000229425.1 PRJNA224116 SAMN02436452 AGLM00000000.1 na 1074157 1309 Streptococcus mutans TCI-212 strain=TCI-212 na latest Contig Major Full 2011-10-06 SMUT6-NEX_6-212 JCVI GCA_000229425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/425/GCF_000229425.1_SMUT6-NEX_6-212/ na na na haploid bacteria 1771432 1771432 37.000000 0 194 194 NCBI RefSeq GCF_000229425.1-RS_2025_07_30 2025-07-30 1839 1671 43 na GCF_000229445.1 PRJNA224116 SAMN02436516 AGLN00000000.1 na 1074159 1309 Streptococcus mutans TCI-218 strain=TCI-218 na latest Contig Major Full 2011-10-06 SMUT6-NEX_8-218 JCVI GCA_000229445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/445/GCF_000229445.1_SMUT6-NEX_8-218/ na na na haploid bacteria 1789375 1789375 37.000000 0 136 136 NCBI RefSeq GCF_000229445.1-RS_2025_07_30 2025-07-30 1801 1686 42 na GCF_000229465.1 PRJNA224116 SAMN02436607 AGLO00000000.1 na 1074160 1309 Streptococcus mutans TCI-219 strain=TCI-219 na latest Contig Major Full 2011-10-06 SMUT6-NEX_9-219 JCVI GCA_000229465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/465/GCF_000229465.1_SMUT6-NEX_9-219/ na na na haploid bacteria 1809266 1809266 37.000000 0 131 131 NCBI RefSeq GCF_000229465.1-RS_2025_07_30 2025-07-30 1837 1722 41 na GCF_000229485.1 PRJNA224116 SAMN02436453 AGLP00000000.1 na 1074161 1309 Streptococcus mutans TCI-220 strain=TCI-220 na latest Contig Major Full 2011-10-06 SMUT6-NEX_10-220 JCVI GCA_000229485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/485/GCF_000229485.1_SMUT6-NEX_10-220/ na na na haploid bacteria 1790639 1790639 37.000000 0 145 145 NCBI RefSeq GCF_000229485.1-RS_2025_07_30 2025-07-30 1813 1686 42 na GCF_000229505.1 PRJNA224116 SAMN02436454 AGLQ00000000.1 na 1074162 1309 Streptococcus mutans TCI-222 strain=TCI-222 na latest Contig Major Full 2011-10-06 SMUT6-NEX_11-222 JCVI GCA_000229505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/505/GCF_000229505.1_SMUT6-NEX_11-222/ na na na haploid bacteria 1861625 1861625 37.000000 0 101 101 NCBI RefSeq GCF_000229505.1-RS_2025_07_30 2025-07-30 1863 1750 43 na GCF_000229525.1 PRJNA224116 SAMN02436517 AGLR00000000.1 na 1074163 1309 Streptococcus mutans TCI-223 strain=TCI-223 na latest Contig Major Full 2011-10-06 SMUT6-NEX_12-223 JCVI GCA_000229525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/525/GCF_000229525.1_SMUT6-NEX_12-223/ na na na haploid bacteria 1809565 1809565 37.000000 0 134 134 NCBI RefSeq GCF_000229525.1-RS_2025_07_30 2025-07-30 1838 1711 41 na GCF_000229545.1 PRJNA224116 SAMN02436355 AGLS00000000.1 na 1074164 1309 Streptococcus mutans TCI-224 strain=TCI-224 na latest Contig Major Full 2011-10-06 SMUT6-NEX_21-224 JCVI GCA_000229545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/545/GCF_000229545.1_SMUT6-NEX_21-224/ na na na haploid bacteria 1797735 1797735 37.000000 0 133 133 NCBI RefSeq GCF_000229545.1-RS_2025_07_30 2025-07-30 1817 1694 43 na GCF_000229565.1 PRJNA224116 SAMN02436356 AGLT00000000.1 na 1074165 1309 Streptococcus mutans TCI-227 strain=TCI-227 na latest Contig Major Full 2011-10-06 SMUT6-NEX_25-227 JCVI GCA_000229565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/565/GCF_000229565.1_SMUT6-NEX_25-227/ na na na haploid bacteria 1802905 1802905 37.000000 0 130 130 NCBI RefSeq GCF_000229565.1-RS_2025_07_30 2025-07-30 1829 1705 43 na GCF_000229585.1 PRJNA224116 SAMN02436518 AGLU00000000.1 na 1074166 1309 Streptococcus mutans TCI-228 strain=TCI-228 na latest Contig Major Full 2011-10-06 SMUT6-NEX_34-228 JCVI GCA_000229585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/585/GCF_000229585.1_SMUT6-NEX_34-228/ na na na haploid bacteria 1859995 1859995 37.000000 0 109 109 NCBI RefSeq GCF_000229585.1-RS_2025_07_30 2025-07-30 1853 1739 42 na GCF_000229605.1 PRJNA224116 SAMN02436608 AGLV00000000.1 na 1074167 1309 Streptococcus mutans TCI-234 strain=TCI-234 na latest Contig Major Full 2011-10-06 SMUT6-NEX_50-234 JCVI GCA_000229605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/605/GCF_000229605.1_SMUT6-NEX_50-234/ na na na haploid bacteria 1854930 1854930 37.000000 0 106 106 NCBI RefSeq GCF_000229605.1-RS_2025_07_30 2025-07-30 1861 1741 43 na GCF_000229625.1 PRJNA224116 SAMN02436609 AGLW00000000.1 na 1074168 1309 Streptococcus mutans TCI-239 strain=TCI-239 na latest Contig Major Full 2011-10-06 SMUT6-NEX_57-239 JCVI GCA_000229625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/625/GCF_000229625.1_SMUT6-NEX_57-239/ na na na haploid bacteria 1898217 1898217 37.000000 0 86 86 NCBI RefSeq GCF_000229625.1-RS_2025_07_30 2025-07-30 1880 1764 43 na GCF_000229645.1 PRJNA224116 SAMN02436455 AGLX00000000.1 na 1074169 1309 Streptococcus mutans TCI-242 strain=TCI-242 na latest Contig Major Full 2011-10-06 SMUT6-NEX_62-242 JCVI GCA_000229645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/645/GCF_000229645.1_SMUT6-NEX_62-242/ na na na haploid bacteria 1914397 1914397 37.000000 0 61 61 NCBI RefSeq GCF_000229645.1-RS_2025_07_30 2025-07-30 1901 1784 44 na GCF_000229665.1 PRJNA224116 SAMN02436519 AGLY00000000.1 na 1074170 1309 Streptococcus mutans TCI-243 strain=TCI-243 na latest Contig Major Full 2011-10-06 SMUT6-NEX_78-243 JCVI GCA_000229665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/665/GCF_000229665.1_SMUT6-NEX_78-243/ na na na haploid bacteria 1914702 1914702 37.000000 0 66 66 NCBI RefSeq GCF_000229665.1-RS_2025_07_30 2025-07-30 1907 1789 44 na GCF_000229685.1 PRJNA224116 SAMN02436436 AGLZ00000000.1 na 1074171 1309 Streptococcus mutans TCI-244 strain=TCI-244 na latest Contig Major Full 2011-10-06 SMUT6-NEX_93-244 JCVI GCA_000229685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/685/GCF_000229685.1_SMUT6-NEX_93-244/ na na na haploid bacteria 1771140 1771140 37.000000 0 143 143 NCBI RefSeq GCF_000229685.1-RS_2025_07_30 2025-07-30 1801 1673 42 na GCF_000229705.1 PRJNA224116 SAMN02436437 AGMA00000000.1 na 1074173 1309 Streptococcus mutans TCI-249 strain=TCI-249 na latest Contig Major Full 2011-10-06 SMUT7-NEX_2-249 JCVI GCA_000229705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/705/GCF_000229705.1_SMUT7-NEX_2-249/ na na na haploid bacteria 1879409 1879409 37.000000 0 98 98 NCBI RefSeq GCF_000229705.1-RS_2025_07_30 2025-07-30 1886 1766 44 na GCF_000229725.1 PRJNA224116 SAMN02436520 AGMB00000000.1 na 1074175 1309 Streptococcus mutans TCI-256 strain=TCI-256 na latest Contig Major Full 2011-10-06 SMUT7-NEX_4-256 JCVI GCA_000229725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/725/GCF_000229725.1_SMUT7-NEX_4-256/ na na na haploid bacteria 1881106 1881106 37.000000 0 110 110 NCBI RefSeq GCF_000229725.1-RS_2025_07_30 2025-07-30 1891 1756 43 na GCF_000229745.1 PRJNA224116 SAMN02436357 AGMC00000000.1 na 1074176 1309 Streptococcus mutans TCI-260 strain=TCI-260 na latest Contig Major Full 2011-10-06 SMUT7-NEX_5-260 JCVI GCA_000229745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/745/GCF_000229745.1_SMUT7-NEX_5-260/ na na na haploid bacteria 1799001 1799001 37.000000 0 141 141 NCBI RefSeq GCF_000229745.1-RS_2025_07_30 2025-07-30 1836 1701 42 na GCF_000229765.1 PRJNA224116 SAMN02436438 AGMD00000000.1 na 1074177 1309 Streptococcus mutans TCI-264 strain=TCI-264 na latest Contig Major Full 2011-10-06 SMUT7-NEX_6-264 JCVI GCA_000229765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/765/GCF_000229765.1_SMUT7-NEX_6-264/ na na na haploid bacteria 1824597 1824597 37.000000 0 137 137 NCBI RefSeq GCF_000229765.1-RS_2025_07_30 2025-07-30 1856 1729 43 na GCF_000229785.1 PRJNA224116 SAMN02436439 AGME00000000.1 na 1074178 1309 Streptococcus mutans TCI-267 strain=TCI-267 na latest Contig Major Full 2011-10-06 SMUT7-NEX_7-267 JCVI GCA_000229785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/785/GCF_000229785.1_SMUT7-NEX_7-267/ na na na haploid bacteria 1819735 1819735 37.000000 0 127 127 NCBI RefSeq GCF_000229785.1-RS_2025_07_30 2025-07-30 1841 1723 43 na GCF_000229805.1 PRJNA224116 SAMN02436521 AGMF00000000.1 na 1074179 1309 Streptococcus mutans TCI-268 strain=TCI-268 na latest Contig Major Full 2011-10-06 SMUT7-NEX_8-268 JCVI GCA_000229805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/805/GCF_000229805.1_SMUT7-NEX_8-268/ na na na haploid bacteria 1855678 1855678 37.000000 0 92 92 NCBI RefSeq GCF_000229805.1-RS_2025_07_30 2025-07-30 1848 1731 39 na GCF_000229825.1 PRJNA224116 SAMN02436358 AGMG00000000.1 na 1074180 1309 Streptococcus mutans TCI-278 strain=TCI-278 na latest Contig Major Full 2011-10-06 SMUT7-NEX_9-278 JCVI GCA_000229825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/825/GCF_000229825.1_SMUT7-NEX_9-278/ na na na haploid bacteria 1856336 1856336 37.000000 0 98 98 NCBI RefSeq GCF_000229825.1-RS_2025_07_30 2025-07-30 1858 1731 42 na GCF_000229845.1 PRJNA224116 SAMN02436440 AGMH00000000.1 na 1074181 1309 Streptococcus mutans TCI-279 strain=TCI-279 na latest Contig Major Full 2011-10-06 SMUT7-NEX_10-279 JCVI GCA_000229845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/845/GCF_000229845.1_SMUT7-NEX_10-279/ na na na haploid bacteria 1809821 1809821 37.000000 0 136 136 NCBI RefSeq GCF_000229845.1-RS_2025_07_30 2025-07-30 1840 1713 42 na GCF_000229865.1 PRJNA224116 SAMN02436610 AGMI00000000.1 na 1074182 1309 Streptococcus mutans TCI-280 strain=TCI-280 na latest Contig Major Full 2011-10-06 SMUT7-NEX_11-280 JCVI GCA_000229865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/865/GCF_000229865.1_SMUT7-NEX_11-280/ na na na haploid bacteria 1818786 1818786 37.000000 0 119 119 NCBI RefSeq GCF_000229865.1-RS_2025_07_30 2025-07-30 1841 1722 41 na GCF_000229885.1 PRJNA224116 SAMN02436611 AGMJ00000000.1 na 1074183 1309 Streptococcus mutans TCI-289 strain=TCI-289 na latest Contig Major Full 2011-10-06 SMUT7-NEX_12-289 JCVI GCA_000229885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/885/GCF_000229885.1_SMUT7-NEX_12-289/ na na na haploid bacteria 1798201 1798201 37.000000 0 140 140 NCBI RefSeq GCF_000229885.1-RS_2025_07_30 2025-07-30 1832 1700 42 na GCF_000229905.1 PRJNA224116 SAMN02436522 AGMK00000000.1 na 1074184 1309 Streptococcus mutans TCI-292 strain=TCI-292 na latest Contig Major Full 2011-10-06 SMUT7-NEX_21-292 JCVI GCA_000229905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/905/GCF_000229905.1_SMUT7-NEX_21-292/ na na na haploid bacteria 1810877 1810877 37.000000 0 137 137 NCBI RefSeq GCF_000229905.1-RS_2025_07_30 2025-07-30 1839 1718 43 na GCF_000229925.1 PRJNA224116 SAMN02436441 AGML00000000.1 na 1074185 1309 Streptococcus mutans TCI-294 strain=TCI-294 na latest Contig Major Full 2011-10-06 SMUT7-NEX_25-294 JCVI GCA_000229925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/925/GCF_000229925.1_SMUT7-NEX_25-294/ na na na haploid bacteria 1891335 1891335 37.000000 0 109 109 NCBI RefSeq GCF_000229925.1-RS_2025_07_30 2025-07-30 1902 1780 43 na GCF_000229945.1 PRJNA224116 SAMN02436523 AGMM00000000.1 na 1074186 1309 Streptococcus mutans TCI-298 strain=TCI-298 na latest Contig Major Full 2011-10-06 SMUT7-NEX_34-298 JCVI GCA_000229945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/945/GCF_000229945.1_SMUT7-NEX_34-298/ na na na haploid bacteria 1743498 1743498 37.000000 0 136 136 NCBI RefSeq GCF_000229945.1-RS_2025_07_30 2025-07-30 1769 1636 40 na GCF_000229965.1 PRJNA224116 SAMN02436612 AGMN00000000.1 na 1074190 1309 Streptococcus mutans TCI-30 strain=TCI-30 na latest Contig Major Full 2011-10-06 SMUT3-NEX_6-30 JCVI GCA_000229965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/965/GCF_000229965.1_SMUT3-NEX_6-30/ na na na haploid bacteria 1880026 1880026 37.000000 0 103 103 NCBI RefSeq GCF_000229965.1-RS_2025_07_30 2025-07-30 1887 1756 43 na GCF_000229985.1 PRJNA224116 SAMN02436613 AGMO00000000.1 na 1074092 1309 Streptococcus mutans TCI-399 strain=TCI-399 na latest Contig Major Full 2011-10-06 SMUT3-NEX_1-399 JCVI GCA_000229985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/229/985/GCF_000229985.1_SMUT3-NEX_1-399/ na na na haploid bacteria 1935728 1935728 36.500000 0 53 53 NCBI RefSeq GCF_000229985.1-RS_2025_07_30 2025-07-30 1914 1798 42 na GCF_000230005.1 PRJNA224116 SAMN02436359 AGMP00000000.1 na 1074093 1309 Streptococcus mutans TCI-400 strain=TCI-400 na latest Contig Major Full 2011-10-06 SMUT3-NEX_2-400 JCVI GCA_000230005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/005/GCF_000230005.1_SMUT3-NEX_2-400/ na na na haploid bacteria 1869620 1869620 37.000000 0 93 93 NCBI RefSeq GCF_000230005.1-RS_2025_07_30 2025-07-30 1869 1750 41 na GCF_000230025.1 PRJNA224116 SAMN02436360 AGMQ00000000.1 na 1074100 1309 Streptococcus mutans TCI-51 strain=TCI-51 na latest Contig Major Full 2011-10-06 SMUT3-NEX_9-51 JCVI GCA_000230025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/025/GCF_000230025.1_SMUT3-NEX_9-51/ na na na haploid bacteria 1936890 1936890 36.500000 0 57 57 NCBI RefSeq GCF_000230025.1-RS_2025_07_30 2025-07-30 1916 1795 41 na GCF_000230045.1 PRJNA224116 SAMN02436361 AGMR00000000.1 na 1074101 1309 Streptococcus mutans TCI-62 strain=TCI-62 na latest Contig Major Full 2011-10-06 SMUT3-NEX_10-62 JCVI GCA_000230045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/045/GCF_000230045.1_SMUT3-NEX_10-62/ na na na haploid bacteria 1804833 1804833 37.000000 0 135 135 NCBI RefSeq GCF_000230045.1-RS_2025_07_30 2025-07-30 1832 1703 43 na GCF_000230065.1 PRJNA224116 SAMN02436362 AGMS00000000.1 na 1074102 1309 Streptococcus mutans TCI-70 strain=TCI-70 na latest Contig Major Full 2011-10-06 SMUT3-NEX_11-70 JCVI GCA_000230065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/065/GCF_000230065.1_SMUT3-NEX_11-70/ na na na haploid bacteria 1855602 1855602 37.000000 0 109 109 NCBI RefSeq GCF_000230065.1-RS_2025_07_30 2025-07-30 1864 1737 40 na GCF_000230085.1 PRJNA224116 SAMN02436363 AGMT00000000.1 na 1074104 1309 Streptococcus mutans TCI-75 strain=TCI-75 na latest Contig Major Full 2011-10-06 SMUT3-NEX_21-75 JCVI GCA_000230085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/085/GCF_000230085.1_SMUT3-NEX_21-75/ na na na haploid bacteria 1879483 1879483 37.000000 0 108 108 NCBI RefSeq GCF_000230085.1-RS_2025_07_30 2025-07-30 1889 1771 44 na GCF_000230105.1 PRJNA224116 SAMN02436596 AGMU00000000.1 na 1074105 1309 Streptococcus mutans TCI-78 strain=TCI-78 na latest Contig Major Full 2011-10-06 SMUT3-NEX_25-78 JCVI GCA_000230105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/105/GCF_000230105.1_SMUT3-NEX_25-78/ na na na haploid bacteria 1883089 1883089 37.000000 0 110 110 NCBI RefSeq GCF_000230105.1-RS_2025_07_30 2025-07-30 1896 1771 43 na GCF_000230125.1 PRJNA224116 SAMN02436524 AGMV00000000.1 na 1074106 1309 Streptococcus mutans TCI-82 strain=TCI-82 na latest Contig Major Full 2011-10-06 SMUT3-NEX_34-82 JCVI GCA_000230125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/125/GCF_000230125.1_SMUT3-NEX_34-82/ na na na haploid bacteria 1941227 1941227 36.500000 0 48 48 NCBI RefSeq GCF_000230125.1-RS_2025_07_30 2025-07-30 1929 1807 42 na GCF_000230145.1 PRJNA224116 SAMN02436442 AGMW00000000.1 na 1074107 1309 Streptococcus mutans TCI-85 strain=TCI-85 na latest Contig Major Full 2011-10-06 SMUT3-NEX_50-85 JCVI GCA_000230145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/145/GCF_000230145.1_SMUT3-NEX_50-85/ na na na haploid bacteria 1921849 1921849 37.000000 0 64 64 NCBI RefSeq GCF_000230145.1-RS_2025_07_30 2025-07-30 1912 1790 44 na GCF_000230165.1 PRJNA224116 SAMN02436525 AGMX00000000.1 na 1074108 1309 Streptococcus mutans TCI-86 strain=TCI-86 na latest Contig Major Full 2011-10-06 SMUT3-NEX_57-86 JCVI GCA_000230165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/165/GCF_000230165.1_SMUT3-NEX_57-86/ na na na haploid bacteria 1820007 1820007 37.000000 0 128 128 NCBI RefSeq GCF_000230165.1-RS_2025_07_30 2025-07-30 1847 1723 40 na GCF_000230185.1 PRJNA224116 SAMN02436597 AGMY00000000.1 na 1074109 1309 Streptococcus mutans TCI-92 strain=TCI-92 na latest Contig Major Full 2011-10-06 SMUT3-NEX_62-92 JCVI GCA_000230185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/185/GCF_000230185.1_SMUT3-NEX_62-92/ na na na haploid bacteria 1941392 1941392 36.500000 0 49 49 NCBI RefSeq GCF_000230185.1-RS_2025_07_30 2025-07-30 1927 1805 43 na GCF_000230205.1 PRJNA224116 SAMN02436526 AGMZ00000000.1 na 1074111 1309 Streptococcus mutans TCI-96 strain=TCI-96 na latest Contig Major Full 2011-10-06 SMUT3-NEX_93-96 JCVI GCA_000230205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/205/GCF_000230205.1_SMUT3-NEX_93-96/ na na na haploid bacteria 1800548 1800548 37.000000 0 121 121 NCBI RefSeq GCF_000230205.1-RS_2025_07_30 2025-07-30 1807 1694 40 na GCF_000230225.1 PRJNA224116 SAMN02436527 AGNA00000000.1 na 1074112 1309 Streptococcus mutans TCI-99 strain=TCI-99 na latest Contig Major Full 2011-10-06 SMUT4-NEX_1-99 J. Craig Venter Institute GCA_000230225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/225/GCF_000230225.1_SMUT4-NEX_1-99/ na na na haploid bacteria 1814786 1814786 37.000000 0 132 132 NCBI RefSeq GCF_000230225.1-RS_2025_07_30 2025-07-30 1847 1722 43 na GCF_000230275.1 PRJNA224116 SAMN02603738 na na 568816 187327 Acidaminococcus intestini RyC-MR95 strain=RyC-MR95 na latest Complete Genome Major Full 2011-10-07 ASM23027v1 Ramon y Cajal University Hospital of Madrid, Valencia University and Public Health Research Superior Center (CSISP) of Valencia's Goverment, Spain GCA_000230275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/275/GCF_000230275.1_ASM23027v1/ na na na haploid bacteria 2487765 2487765 50.000000 1 1 1 NCBI RefSeq GCF_000230275.1-RS_2026_02_06 2026-02-06 2406 2302 65 22123762 GCF_000230295.1 PRJNA224116 SAMN02603353 na na 487215 1314 Streptococcus pyogenes Alab49 strain=Alab49 na latest Complete Genome Major Full 2011-10-07 ASM23029v1 Institute for Genome Sciences GCA_000230295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/295/GCF_000230295.1_ASM23029v1/ na na na haploid bacteria 1827308 1827308 38.500000 1 1 1 NCBI RefSeq GCF_000230295.1-RS_2025_08_18 2025-08-18 1846 1694 89 21949075 GCF_000230335.1 PRJNA224116 SAMN00739875 AGIC00000000.1 na 1089300 1313 Streptococcus pneumoniae R6M2-PG strain=R6M2-PG na latest Contig Major Full 2011-10-11 ASM23033v2 Université Laval GCA_000230335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/335/GCF_000230335.1_ASM23033v2/ na na na haploid bacteria 1981615 1981615 39.500000 0 78 78 NCBI RefSeq GCF_000230335.1-RS_2025_07_31 2025-07-31 2058 1838 46 na GCF_000230355.1 PRJNA224116 SAMN02470530 AGID00000000.1 na 1089299 1313 Streptococcus pneumoniae 1974M1-LZD strain=1974M1-LZD na latest Contig Major Full 2011-10-11 ASM23035v2 Université Laval GCA_000230355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/355/GCF_000230355.1_ASM23035v2/ na na na haploid bacteria 2028625 2028625 39.500000 0 115 115 NCBI RefSeq GCF_000230355.1-RS_2025_07_31 2025-07-31 2156 1915 49 na GCF_000230465.1 PRJNA224116 SAMN02469352 AGFH00000000.1 na 1086014 48296 Acinetobacter pittii D499 strain=D499 na latest Contig Major Full 2011-10-13 ASM23046v1 Beijing Genomics Institute GCA_000230465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/465/GCF_000230465.1_ASM23046v1/ na na na haploid bacteria 4103824 4103824 39.000000 1 30 30 NCBI RefSeq GCF_000230465.1-RS_2025_06_29 2025-06-29 4023 3793 103 22156399 GCF_000230505.1 PRJNA224116 SAMEA2272073 na na 936157 28901 Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 strain=2007-60-3289-1 na latest Contig Major Full 2011-01-25 ASM23050v1 Cebitec, Bielefeld University GCA_000230505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/505/GCF_000230505.1_ASM23050v1/ na na na haploid bacteria 4920331 4920331 52.000000 1 67 67 NCBI RefSeq GCF_000230505.1-RS_2025_06_06 2025-06-06 4820 4514 83 21296964 GCF_000230555.1 PRJNA224116 SAMN02604343 na na 1082931 531813 Pelagibacterium halotolerans B2 strain=B2 na latest Complete Genome Major Full 2011-10-14 ASM23055v1 Zhejiang University GCA_000230555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/555/GCF_000230555.1_ASM23055v1/ na assembly from type material na haploid bacteria 3948887 3948887 61.500000 2 2 2 NCBI RefSeq GCF_000230555.1-RS_2026_03_31 2026-03-31 3877 3784 57 22156395 GCF_000230625.1 PRJNA225511 SAMN00760826 AFPA00000000.1 reference genome 858893 5970 Exophiala dermatitidis NIH/UT8656 strain=NIH/UT8656 na latest Scaffold Major Full 2011-10-19 Exop_derm_V1 Broad Institute GCA_000230625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/625/GCF_000230625.1_Exop_derm_V1/ na na na haploid fungi 26350763 26346203 51.500000 0 10 238 Broad Institute Annotation submitted by Broad Institute 2024-01-02 9355 9284 70 28348446 GCF_000230655.2 PRJNA224116 SAMN02261406 na reference genome 243274 2336 Thermotoga maritima MSB8 strain=MSB8 na latest Complete Genome Major Full 2013-12-20 ASM23065v3 JGI GCA_000230655.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/655/GCF_000230655.2_ASM23065v3/ na assembly from type material na haploid bacteria 1869644 1869644 46.000000 1 1 1 NCBI RefSeq GCF_000230655.2-RS_2025_12_09 2025-12-09 1918 1856 52 na GCF_000230675.1 PRJNA224116 SAMN02261394 AGIK00000000.1 na 166318 166318 Synechococcus sp. WH 8016 strain=WH 8016 na latest Contig Major Full 2011-10-14 ASM23067v1 JGI GCA_000230675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/675/GCF_000230675.1_ASM23067v1/ na na na haploid bacteria 2694843 2694843 54.000000 0 16 16 NCBI RefSeq GCF_000230675.1-RS_2024_08_22 2024-08-22 2924 2844 49 na GCF_000230695.2 PRJNA224116 SAMN02232048 na na 666685 666685 Rhodanobacter denitrificans strain=2APBS1 na latest Complete Genome Major Full 2013-03-11 ASM23069v3 DOE Joint Genome Institute GCA_000230695.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/695/GCF_000230695.2_ASM23069v3/ na assembly from type material na haploid bacteria 4225490 4225490 67.500000 1 1 1 NCBI RefSeq GCF_000230695.2-RS_2026_05_05 2026-05-05 3953 3860 59 na GCF_000230715.2 PRJNA224116 SAMN02232042 na reference genome 797304 44930 Natronobacterium gregoryi SP2 strain=SP2 na latest Complete Genome Major Full 2012-12-10 ASM23071v3 DOE Joint Genome Institute GCA_000230715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/715/GCF_000230715.2_ASM23071v3/ na assembly from type material na haploid archaea 3788356 3788356 62.000000 1 1 1 NCBI RefSeq GCF_000230715.2-RS_2025_11_21 2025-11-21 3771 3595 60 na GCF_000230735.2 PRJNA224116 SAMN02261373 na reference genome 797303 69525 Natrinema pellirubrum DSM 15624 strain=DSM 15624 na latest Complete Genome Major Full 2012-12-27 ASM23073v3 JGI GCA_000230735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/735/GCF_000230735.2_ASM23073v3/ na assembly from type material na haploid archaea 4354100 4354100 64.000000 3 3 3 NCBI RefSeq GCF_000230735.2-RS_2025_11_21 2025-11-21 4381 4164 60 na GCF_000230755.1 PRJNA224116 SAMN02469591 AGFW00000000.1 na 1089443 1423 Bacillus subtilis subsp. subtilis str. SC-8 strain=SC-8 na latest Contig Major Full 2011-10-13 ASM23075v2 Chung-Ang University GCA_000230755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/755/GCF_000230755.1_ASM23075v2/ na na na haploid bacteria 4138818 4138818 43.500000 0 17 17 NCBI RefSeq GCF_000230755.1-RS_2025_06_28 2025-06-28 4329 4185 60 22207744 GCF_000230775.1 PRJNA224116 SAMN02404397 AGQO00000000.1 na 1071969 630 Yersinia enterocolitica subsp. palearctica PhRBD_Ye1 strain=PhRBD_Ye1 na latest Contig Major Full 2011-10-17 ASM23077v2 St Luke's Medical Center - Quezon City GCA_000230775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/775/GCF_000230775.1_ASM23077v2/ na na na haploid bacteria 4367390 4367390 47.000000 0 112 112 NCBI RefSeq GCF_000230775.1-RS_2026_03_27 2026-03-27 4007 3717 72 22207747 GCF_000230835.1 PRJNA224116 SAMN02256530 AFWX00000000.1 na 641107 641107 Clostridium sp. DL-VIII strain=DL-VIII na latest Chromosome Major Full 2011-11-15 ASM23083v1 DOE Joint Genome Institute GCA_000230835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/835/GCF_000230835.1_ASM23083v1/ na na na haploid bacteria 6477357 6477257 30.000000 1 1 2 NCBI RefSeq GCF_000230835.1-RS_2024_05_28 2024-05-28 6080 5842 123 23929491 GCF_000230875.1 PRJNA224116 SAMN01081638 AFYI00000000.1 na 596155 28901 Salmonella enterica subsp. enterica serovar Infantis str. SARB27 strain=SARB27 na latest Chromosome Major Full 2011-10-21 Salmonella_enterica_SARB27-2.0 WUGSC GCA_000230875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/875/GCF_000230875.1_Salmonella_enterica_SARB27-2.0/ na na na haploid bacteria 4881575 4880975 52.000000 2 2 8 NCBI RefSeq GCF_000230875.1-RS_2025_08_06 2025-08-06 4710 4397 106 na GCF_000230895.2 PRJNA224116 SAMN02261383 na na 710685 36814 Mycolicibacterium rhodesiae NBB3 strain=NBB3 na latest Complete Genome Major Full 2011-12-12 ASM23089v3 JGI GCA_000230895.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/895/GCF_000230895.2_ASM23089v3/ na na na haploid bacteria 6415739 6415739 65.500000 1 1 1 NCBI RefSeq GCF_000230895.2-RS_2025_07_25 2025-07-25 6298 6134 56 na GCF_000230915.1 PRJNA224116 SAMN02261364 AGIP00000000.1 na 743719 228574 Paenibacillus lactis 154 strain=154 na latest Contig Major Full 2011-10-18 ASM23091v1 JGI GCA_000230915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/915/GCF_000230915.1_ASM23091v1/ na na na haploid bacteria 6805951 6805951 52.000000 0 56 56 NCBI RefSeq GCF_000230915.1-RS_2026_04_21 2026-04-21 6244 6066 111 na GCF_000230975.2 PRJNA224116 SAMN02598541 na na 670307 53399 Hyphomicrobium denitrificans 1NES1 strain=1NES1 na latest Complete Genome Major Full 2013-04-30 ASM23097v3 DOE Joint Genome Institute GCA_000230975.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/975/GCF_000230975.2_ASM23097v3/ na na na haploid bacteria 3808687 3808687 59.500000 1 1 1 NCBI RefSeq GCF_000230975.2-RS_2025_06_09 2025-06-09 3643 3550 54 23833140 GCF_000230995.2 PRJNA224116 SAMN02232035 na reference genome 754035 536018 Mesorhizobium australicum WSM2073 strain=WSM2073 na latest Complete Genome Major Full 2012-12-28 ASM23099v3 DOE Joint Genome Institute GCA_000230995.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/230/995/GCF_000230995.2_ASM23099v3/ na assembly from type material na haploid bacteria 6200534 6200534 63.000000 1 1 1 NCBI RefSeq GCF_000230995.2-RS_2026_04_29 2026-04-29 6000 5803 63 na GCF_000231015.2 PRJNA224116 SAMN02232017 na reference genome 768672 94694 Desulfurococcus amylolyticus DSM 16532 strain=DSM 16532 na latest Complete Genome Major Full 2012-06-07 ASM23101v3 DOE Joint Genome Institute GCA_000231015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/015/GCF_000231015.2_ASM23101v3/ na assembly from heterotypic synonym type material na haploid archaea 1384116 1384116 45.000000 1 1 1 NCBI RefSeq GCF_000231015.2-RS_2026_03_30 2026-03-30 1549 1488 51 23012283 GCF_000231035.2 PRJNA224116 SAMN02256527 AGIT00000000.2 reference genome 882084 52698 Saccharomonospora iraqiensis subsp. paurometabolica YIM 90007 strain=YIM 90007 na latest Scaffold Major Full 2014-01-16 ASM23103v3 DOE Joint Genome Institute GCA_000231035.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/035/GCF_000231035.2_ASM23103v3/ na assembly from type material na haploid bacteria 4669397 4574497 72.000000 0 82 1031 NCBI RefSeq GCF_000231035.2-RS_2025_12_10 2025-12-10 4852 4394 55 na GCF_000231055.2 PRJNA224116 SAMN02261398 AGIU00000000.2 na 882081 40988 Saccharomonospora azurea NA-128 strain=NA-128 na latest Chromosome Major Full 2012-03-06 ASM23105v3 JGI GCA_000231055.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/055/GCF_000231055.2_ASM23105v3/ na assembly from type material na haploid bacteria 4763852 4754352 70.000000 1 1 96 NCBI RefSeq GCF_000231055.2-RS_2025_12_13 2025-12-13 4534 4379 55 22768365 GCF_000231075.2 PRJNA224116 SAMN00117521 AFWY00000000.3 na 385957 385957 Amycolatopsis sp. ATCC 39116 strain=ATCC 39116 na latest Contig Major Full 2013-05-06 ASM23107v3 DOE Joint Genome Institute GCA_000231075.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/075/GCF_000231075.2_ASM23107v3/ na na na haploid bacteria 8394307 8394307 72.000000 0 119 119 NCBI RefSeq GCF_000231075.2-RS_2024_08_13 2024-08-13 8313 8127 58 22493203 GCF_000231115.1 PRJNA242549 SAMN02981316 AEYK00000000.1 reference genome 993615 42399 Vittaforma corneae ATCC 50505 strain=ATCC 50505 na latest Scaffold Major Full 2011-10-21 Vitt_corn_V1 Broad Institute GCA_000231115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/115/GCF_000231115.1_Vitt_corn_V1/ na na na haploid fungi 3213516 3148737 36.500000 0 220 314 Broad Institute Annotation submitted by Broad Institute 2024-01-02 2293 2239 54 na GCF_000231155.1 PRJNA224116 SAMN02471593 AGQU00000000.1 na 1087483 36809 Mycobacteroides abscessus 47J26 strain=47J26 na latest Contig Major Full 2011-10-20 ASM23115v2 University of Birmingham GCA_000231155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/155/GCF_000231155.1_ASM23115v2/ na na na haploid bacteria 4874047 4874047 64.000000 0 17 17 NCBI RefSeq GCF_000231155.1-RS_2026_03_20 2026-03-20 4865 4740 53 22207751 GCF_000231175.1 PRJNA224116 SAMN02603861 na na 573825 173 Leptospira interrogans serovar Lai str. IPAV strain=IPAV na latest Complete Genome Major Full 2011-10-20 ASM23117v1 Shanghai Jiao Tong University GCA_000231175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/175/GCF_000231175.1_ASM23117v1/ na na na haploid bacteria 4708530 4708530 35.000000 2 2 2 NCBI RefSeq GCF_000231175.1-RS_2026_03_27 2026-03-27 3883 3648 44 21423275 GCF_000231215.1 PRJNA224116 SAMN02602997 na na 1091045 1747 Cutibacterium acnes subsp. defendens ATCC 11828 strain=ATCC 11828 na latest Complete Genome Major Full 2011-10-20 ASM23121v1 BAYGEN GCA_000231215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/215/GCF_000231215.1_ASM23121v1/ na assembly from type material na haploid bacteria 2488626 2488626 60.000000 1 1 1 NCBI RefSeq GCF_000231215.1-RS_2025_12_26 2025-12-26 2410 2202 54 22156398 GCF_000231235.1 PRJNA224116 SAMN02463763 ACSB00000000.1 na 563033 43675 Rothia mucilaginosa M508 strain=M508 na latest Scaffold Major Full 2011-10-21 Roth_muci_M508_V1 Broad Institute GCA_000231235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/235/GCF_000231235.1_Roth_muci_M508_V1/ na na na haploid bacteria 2313271 2310168 59.500000 0 8 18 NCBI RefSeq GCF_000231235.1-RS_2026_01_30 2026-01-30 1843 1777 62 na GCF_000231255.1 PRJNA224116 SAMN02463811 ACZJ00000000.1 na 679198 732 Aggregatibacter aphrophilus F0387 strain=F0387 na latest Scaffold Major Full 2011-10-21 Aggr_aphr_F0387_V1 Broad Institute GCA_000231255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/255/GCF_000231255.1_Aggr_aphr_F0387_V1/ na na na haploid bacteria 2262693 2253935 42.000000 0 12 24 NCBI RefSeq GCF_000231255.1-RS_2026_01_30 2026-01-30 2172 2050 73 na GCF_000231275.1 PRJNA224116 SAMN02463850 ADLD00000000.1 na 742725 626932 Alistipes indistinctus YIT 12060 strain=YIT 12060 na latest Scaffold Major Full 2011-10-21 Alis_indi_YIT_V1 Broad Institute GCA_000231275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/275/GCF_000231275.1_Alis_indi_YIT_V1/ na assembly from type material na haploid bacteria 2855429 2850978 55.000000 0 6 18 NCBI RefSeq GCF_000231275.1-RS_2025_12_02 2025-12-02 2371 2293 51 na GCF_000231305.1 PRJNA224116 SAMN02470119 AGCW00000000.1 na 714083 1079994 Leucobacter chromiiresistens JG 31 strain=JG 31 na latest Scaffold Major Full 2011-10-21 ASM23130v1 Karlsruhe Institute of Technology GCA_000231305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/305/GCF_000231305.1_ASM23130v1/ na assembly from type material na haploid bacteria 3373426 3084694 70.000000 0 29 257 NCBI RefSeq GCF_000231305.1-RS_2026_02_08 2026-02-08 3038 2929 48 22207746 GCF_000231325.1 PRJNA224116 SAMN02469902 AEYY00000000.1 na 996306 1307 Streptococcus suis R61 strain=R61 na latest Contig Major Full 2011-10-21 ASM23132v2 Huazhong Agricultural University GCA_000231325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/325/GCF_000231325.1_ASM23132v2/ na na na haploid bacteria 2390914 2390914 41.000000 0 53 53 NCBI RefSeq GCF_000231325.1-RS_2025_08_17 2025-08-17 2381 2191 59 na GCF_000231345.1 PRJNA224116 SAMN02256537 AGEX00000000.1 na 693972 62322 Shewanella baltica OS625 strain=OS625 na latest Contig Major Full 2011-10-21 ASM23134v2 DOE Joint Genome Institute GCA_000231345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/345/GCF_000231345.1_ASM23134v2/ na na na haploid bacteria 5195239 5195239 46.500000 0 53 53 NCBI RefSeq GCF_000231345.1-RS_2026_04_06 2026-04-06 4518 4302 137 22328742 GCF_000231365.1 PRJNA224116 SAMN02256526 AGIZ00000000.1 na 741277 372787 Fischerella thermalis JSC-11 strain=JSC-11 na latest Contig Major Full 2011-10-21 ASM23136v1 DOE Joint Genome Institute GCA_000231365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/365/GCF_000231365.1_ASM23136v1/ na na na haploid bacteria 5380000 5380000 41.000000 0 34 34 NCBI RefSeq GCF_000231365.1-RS_2026_04_14 2026-04-14 4683 4446 54 na GCF_000231385.2 PRJNA224116 SAMN02261405 na reference genome 768704 79209 Desulfosporosinus meridiei DSM 13257 strain=DSM 13257 na latest Complete Genome Major Full 2012-08-27 ASM23138v3 JGI GCA_000231385.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/385/GCF_000231385.2_ASM23138v3/ na assembly from type material na haploid bacteria 4873567 4873567 42.000000 1 1 1 NCBI RefSeq GCF_000231385.2-RS_2026_05_13 2026-05-13 4588 4406 117 23105050 GCF_000231405.2 PRJNA224116 SAMN02261393 na reference genome 871968 142877 Desulfitobacterium metallireducens DSM 15288 strain=DSM 15288 na latest Complete Genome Major Full 2014-01-03 ASM23140v3 JGI GCA_000231405.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/405/GCF_000231405.2_ASM23140v3/ na assembly from type material na haploid bacteria 3176073 3176073 42.000000 1 1 1 NCBI RefSeq GCF_000231405.2-RS_2026_05_13 2026-05-13 3127 2999 101 29040502 GCF_000231445.1 PRJNA224116 SAMN02470916 AGFR00000000.1 reference genome 1088868 479936 Commensalibacter intestini A911 strain=A911 na latest Contig Major Full 2011-10-21 ASM23144v1 Seoul National University, Republic of Korea GCA_000231445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/445/GCF_000231445.1_ASM23144v1/ na assembly from type material na haploid bacteria 2454778 2454778 37.000000 0 26 26 NCBI RefSeq GCF_000231445.1-RS_2024_12_15 2024-12-15 2292 2223 50 na GCF_000231865.1 PRJNA224116 SAMN02603320 na na 1005041 1307 Streptococcus suis SS12 strain=SS12 na latest Complete Genome Major Full 2011-10-25 ASM23186v1 Huazhong Agricultural University GCA_000231865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/865/GCF_000231865.1_ASM23186v1/ na na na haploid bacteria 2096866 2096866 41.000000 1 1 1 NCBI RefSeq GCF_000231865.1-RS_2025_12_10 2025-12-10 2080 1940 75 22026465 GCF_000231885.1 PRJNA224116 SAMN02603321 na na 1005042 1307 Streptococcus suis D9 strain=D9 na latest Complete Genome Major Full 2011-10-25 ASM23188v1 Huazhong Agricultural University GCA_000231885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/885/GCF_000231885.1_ASM23188v1/ na na na haploid bacteria 2177656 2177656 41.000000 1 1 1 NCBI RefSeq GCF_000231885.1-RS_2026_01_23 2026-01-23 2130 1936 70 22026465 GCF_000231905.1 PRJNA224116 SAMN02603322 na na 1004952 1307 Streptococcus suis D12 strain=D12 na latest Complete Genome Major Full 2011-10-25 ASM23190v1 Huazhong Agricultural University GCA_000231905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/905/GCF_000231905.1_ASM23190v1/ na na na haploid bacteria 2183059 2183059 41.500000 1 1 1 NCBI RefSeq GCF_000231905.1-RS_2026_01_23 2026-01-23 2150 1979 71 22026465 GCF_000231925.1 PRJNA224116 SAMN02603323 na na 1004951 1307 Streptococcus suis ST1 strain=ST1 na latest Complete Genome Major Full 2011-10-25 ASM23192v1 Huazhong Agricultural University GCA_000231925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/925/GCF_000231925.1_ASM23192v1/ na na na haploid bacteria 2034321 2034321 41.500000 1 1 1 NCBI RefSeq GCF_000231925.1-RS_2026_01_23 2026-01-23 2032 1838 74 22026465 GCF_000232325.1 PRJNA224116 SAMN00792787 AGON00000000.1 na 760865 1313 Streptococcus pneumoniae 6963-05 strain=6963-05 na latest Contig Major Full 2011-10-25 ASM23232v2 Institute for Genome Sciences GCA_000232325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/325/GCF_000232325.1_ASM23232v2/ na na na haploid bacteria 2114952 2114952 39.500000 0 16 16 NCBI RefSeq GCF_000232325.1-RS_2025_07_30 2025-07-30 2165 1896 87 na GCF_000232385.1 PRJNA224116 SAMN00792793 AGOQ00000000.1 na 760823 1313 Streptococcus pneumoniae GA44378 strain=GA44378 na latest Contig Major Full 2011-10-25 ASM23238v2 Institute for Genome Sciences GCA_000232385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/385/GCF_000232385.1_ASM23238v2/ na na na haploid bacteria 2210599 2210599 39.500000 0 11 11 NCBI RefSeq GCF_000232385.1-RS_2025_07_08 2025-07-08 2247 1974 93 na GCF_000232425.1 PRJNA224116 SAMN00792704 AGOS00000000.1 na 760885 1313 Streptococcus pneumoniae NP170 strain=NP170 na latest Contig Major Full 2011-10-25 ASM23242v2 Institute for Genome Sciences GCA_000232425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/425/GCF_000232425.1_ASM23242v2/ na na na haploid bacteria 2190197 2190197 39.500000 0 15 15 NCBI RefSeq GCF_000232425.1-RS_2025_07_08 2025-07-08 2237 1959 82 na GCF_000232605.1 PRJNA224116 SAMN00792744 AGPB00000000.1 na 760775 1313 Streptococcus pneumoniae GA13856 strain=GA13856 na latest Contig Major Full 2011-10-25 ASM23260v2 Institute for Genome Sciences GCA_000232605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/605/GCF_000232605.1_ASM23260v2/ na na na haploid bacteria 2046490 2046490 40.000000 0 10 10 NCBI RefSeq GCF_000232605.1-RS_2025_07_08 2025-07-08 2110 1856 81 na GCF_000232945.1 PRJNA224116 SAMN00792662 AGPS00000000.1 na 760833 1313 Streptococcus pneumoniae GA47360 strain=GA47360 na latest Contig Major Full 2011-10-25 ASM23294v2 Institute for Genome Sciences GCA_000232945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/945/GCF_000232945.1_ASM23294v2/ na na na haploid bacteria 2159207 2159207 40.000000 0 16 16 NCBI RefSeq GCF_000232945.1-RS_2025_07_08 2025-07-08 2222 1946 82 na GCF_000232985.1 PRJNA224116 SAMN00792665 AGPU00000000.1 na 760837 1313 Streptococcus pneumoniae GA47388 strain=GA47388 na latest Contig Major Full 2011-10-25 ASM23298v2 Institute for Genome Sciences GCA_000232985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/232/985/GCF_000232985.1_ASM23298v2/ na na na haploid bacteria 2140615 2140615 39.500000 0 7 7 NCBI RefSeq GCF_000232985.1-RS_2025_07_08 2025-07-08 2218 1942 85 na GCF_000233085.1 PRJNA224116 SAMN00792686 AGPZ00000000.1 na 760856 1313 Streptococcus pneumoniae GA52306 strain=GA52306 na latest Contig Major Full 2011-10-25 ASM23308v2 Institute for Genome Sciences GCA_000233085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/085/GCF_000233085.1_ASM23308v2/ na na na haploid bacteria 2130965 2130965 40.000000 0 19 19 NCBI RefSeq GCF_000233085.1-RS_2025_07_08 2025-07-08 2214 1935 79 na GCF_000233205.1 PRJNA224116 SAMN00792701 AGQF00000000.1 na 760882 1313 Streptococcus pneumoniae NP112 strain=NP112 na latest Contig Major Full 2011-10-25 ASM23320v2 Institute for Genome Sciences GCA_000233205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/205/GCF_000233205.1_ASM23320v2/ na na na haploid bacteria 2072320 2072320 40.000000 0 9 9 NCBI RefSeq GCF_000233205.1-RS_2025_07_08 2025-07-08 2125 1865 74 na GCF_000233265.1 PRJNA224116 SAMN00792724 AGQI00000000.1 na 760754 1313 Streptococcus pneumoniae GA07228 strain=GA07228 na latest Contig Major Full 2011-10-25 ASM23326v2 Institute for Genome Sciences GCA_000233265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/265/GCF_000233265.1_ASM23326v2/ na na na haploid bacteria 2035787 2035787 40.000000 0 8 8 NCBI RefSeq GCF_000233265.1-RS_2025_07_08 2025-07-08 2143 1864 90 na GCF_000233285.1 PRJNA224116 SAMN00792727 AGQJ00000000.1 na 760758 1313 Streptococcus pneumoniae GA08780 strain=GA08780 na latest Contig Major Full 2011-10-25 ASM23328v2 Institute for Genome Sciences GCA_000233285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/285/GCF_000233285.1_ASM23328v2/ na na na haploid bacteria 2145269 2145269 39.500000 0 11 11 NCBI RefSeq GCF_000233285.1-RS_2025_04_24 2025-04-24 2232 1938 94 na GCF_000233325.1 PRJNA224116 SAMN00792698 AGQL00000000.1 na 760887 1313 Streptococcus pneumoniae NorthCarolina6A-23 strain=NorthCarolina6A-23 na latest Contig Major Full 2011-10-25 ASM23332v2 Institute for Genome Sciences GCA_000233325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/325/GCF_000233325.1_ASM23332v2/ na na na haploid bacteria 2163365 2163365 39.500000 0 16 16 NCBI RefSeq GCF_000233325.1-RS_2025_07_24 2025-07-24 2252 1960 81 na GCF_000233355.2 PRJNA224116 SAMN02471001 AGQQ00000000.2 na 1079988 1718 Corynebacterium glutamicum ATCC 14067 strain=ATCC 14067 na latest Contig Major Full 2014-06-20 Corynebacterium glutamicum ATCC14067 South China University of Technology GCA_000233355.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/355/GCF_000233355.2_Corynebacterium_glutamicum_ATCC14067/ na na na haploid bacteria 3311083 3311083 54.000000 0 2 2 NCBI RefSeq GCF_000233355.2-RS_2026_03_28 2026-03-28 3164 3014 77 22247536 GCF_000233395.1 PRJNA224116 SAMN02469907 AFWZ00000000.1 na 1072576 53346 Enterococcus mundtii crl1656 strain=crl1656 na latest Contig Major Full 2011-10-27 ASM23339v2 IBR-UNR GCA_000233395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/395/GCF_000233395.1_ASM23339v2/ na na na haploid bacteria 3064512 3064512 38.500000 0 643 643 NCBI RefSeq GCF_000233395.1-RS_2025_09_18 2025-09-18 3233 2853 63 22207752 GCF_000233435.1 PRJNA224116 SAMN02604332 na na 1074889 39768 Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR strain=MADAR na latest Complete Genome Major Full 2011-10-31 ASM23343v1 Yale University GCA_000233435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/435/GCF_000233435.1_ASM23343v1/ na na na haploid bacteria 590336 590336 27.500000 2 2 2 NCBI RefSeq GCF_000233435.1-RS_2024_08_13 2024-08-13 596 548 40 22020505 GCF_000233455.1 PRJNA224116 SAMN02463853 ADLJ00000000.1 na 742733 358743 [Clostridium] citroniae WAL-17108 strain=WAL-17108 na latest Scaffold Major Full 2011-11-02 Clos_citr_WAL_17108_V1 Broad Institute GCA_000233455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/455/GCF_000233455.1_Clos_citr_WAL_17108_V1/ na na na haploid bacteria 6647380 6624800 49.000000 0 41 84 NCBI RefSeq GCF_000233455.1-RS_2026_02_27 2026-02-27 6192 5982 90 na GCF_000233535.1 PRJNA224116 SAMN02463784 ACVE00000000.1 na 661087 661086 Olsenella sp. oral taxon 809 str. F0356 strain=F0356 na latest Scaffold Major Full 2011-11-02 Olsenella_sp_F0356_V1 Broad Institute GCA_000233535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/535/GCF_000233535.1_Olsenella_sp_F0356_V1/ na na na haploid bacteria 2163862 2159805 66.500000 0 3 17 NCBI RefSeq GCF_000233535.1-RS_2024_08_13 2024-08-13 1954 1870 54 na GCF_000233575.1 PRJNA224116 SAMN02603318 na na 993512 1307 Streptococcus suis A7 strain=A7 na latest Complete Genome Major Full 2011-11-01 ASM23357v1 Huazhong Agricultural University GCA_000233575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/575/GCF_000233575.1_ASM23357v1/ na na na haploid bacteria 2038409 2038409 41.000000 1 1 1 NCBI RefSeq GCF_000233575.1-RS_2026_01_23 2026-01-23 1987 1837 72 22026465 GCF_000233595.1 PRJNA224116 SAMN02603299 na reference genome 1095774 553 Pantoea ananatis PA13 strain=PA13 na latest Complete Genome Major Full 2011-11-01 ASM23359v1 Gyeongsang National University GCA_000233595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/595/GCF_000233595.1_ASM23359v1/ na na na haploid bacteria 4867131 4867131 53.500000 2 2 2 NCBI RefSeq GCF_000233595.1-RS_2025_09_05 2025-09-05 4608 4432 123 22207741 GCF_000233655.1 PRJNA224116 SAMN02470545 AGSO00000000.1 na 1064537 173362 Brachybacterium paraconglomeratum LC44 strain=LC44 na latest Contig Major Full 2011-11-02 LC44-4.0 Michael G. DeGroote Institute for Infectious Disease Research GCA_000233655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/655/GCF_000233655.1_LC44-4.0/ na na na haploid bacteria 3784483 3784483 72.500000 0 50 50 NCBI RefSeq GCF_000233655.1-RS_2026_03_31 2026-03-31 3475 3366 69 22509370 GCF_000233695.2 PRJNA224116 SAMN02261381 AGJR00000000.2 reference genome 879212 2293 Desulfobacter postgatei 2ac9 strain=2ac9 na latest Chromosome Major Full 2012-05-31 ASM23369v3 JGI GCA_000233695.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/695/GCF_000233695.2_ASM23369v3/ na assembly from type material na haploid bacteria 3974658 3972458 47.000000 1 1 23 NCBI RefSeq GCF_000233695.2-RS_2025_08_27 2025-08-27 3725 3613 64 na GCF_000233715.2 PRJNA224116 SAMN02598540 na reference genome 767817 102134 Desulfoscipio gibsoniae DSM 7213 strain=DSM 7213 na latest Complete Genome Major Full 2013-05-06 ASM23371v3 JGI GCA_000233715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/715/GCF_000233715.2_ASM23371v3/ na assembly from type material na haploid bacteria 4855529 4855529 45.500000 1 1 1 NCBI RefSeq GCF_000233715.2-RS_2026_07_03 2026-07-03 4713 4512 92 na GCF_000233755.1 PRJNA224116 SAMN02604241 na na 1088720 47715 Lacticaseibacillus rhamnosus ATCC 8530 strain=ATCC 8530 na latest Complete Genome Major Full 2011-11-03 ASM23375v1 University of Saskatchewan GCA_000233755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/755/GCF_000233755.1_ASM23375v1/ na na na haploid bacteria 2960339 2960339 47.000000 1 1 1 NCBI RefSeq GCF_000233755.1-RS_2026_01_06 2026-01-06 2739 2610 78 22247527 GCF_000233795.1 PRJNA224116 SAMN02471301 AFTF00000000.1 na 1052680 317 Pseudomonas syringae pv. actinidiae str. NCPPB 3871 strain=NCPPB 3871 na latest Contig Major Full 2011-11-03 ASM23379v2 Università di Udine GCA_000233795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/795/GCF_000233795.1_ASM23379v2/ na na na haploid bacteria 5938086 5938086 59.000000 0 462 462 NCBI RefSeq GCF_000233795.1-RS_2025_07_30 2025-07-30 5508 5137 57 na GCF_000233815.1 PRJNA224116 SAMN02471300 AFTG00000000.1 na 1052681 317 Pseudomonas syringae pv. actinidiae str. CRAFRU8.43 strain=CRAFRU8.43 na latest Contig Major Full 2011-11-03 ASM23381v2 Università di Udine GCA_000233815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/815/GCF_000233815.1_ASM23381v2/ na na na haploid bacteria 6143194 6143194 58.500000 0 585 585 NCBI RefSeq GCF_000233815.1-RS_2025_07_31 2025-07-31 5719 5336 57 na GCF_000233835.1 PRJNA224116 SAMN02471302 AFTH00000000.1 na 1052682 317 Pseudomonas syringae pv. actinidiae str. NCPPB 3739 strain=NCPPB 3739 na latest Contig Major Full 2011-11-03 ASM23383v2 Università di Udine GCA_000233835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/835/GCF_000233835.1_ASM23383v2/ na assembly from pathotype material na haploid bacteria 5927897 5927897 59.000000 0 815 815 NCBI RefSeq GCF_000233835.1-RS_2026_05_18 2026-05-18 5717 5272 53 na GCF_000233875.1 PRJNA224116 SAMN02603902 na na 885276 562 Escherichia coli str. 'clone D i2' strain=clone D i2 na latest Complete Genome Major Full 2011-11-03 ASM23387v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000233875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/875/GCF_000233875.1_ASM23387v1/ na na na haploid bacteria 5038386 5038386 50.500000 1 1 1 NCBI RefSeq GCF_000233875.1-RS_2025_05_17 2025-05-17 4850 4518 116 22046404 GCF_000233895.1 PRJNA224116 SAMN02603903 na na 885275 562 Escherichia coli str. 'clone D i14' strain=clone D i14 na latest Complete Genome Major Full 2011-11-03 ASM23389v1 TEDA School of Biological Sciences and Biotechnology, Nankai University GCA_000233895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/895/GCF_000233895.1_ASM23389v1/ na na na haploid bacteria 5038386 5038386 50.500000 1 1 1 NCBI RefSeq GCF_000233895.1-RS_2025_05_21 2025-05-21 4849 4517 116 22046404 GCF_000233915.3 PRJNA224116 SAMN02603133 na reference genome 1045855 415229 Pseudoxanthomonas spadix BD-a59 strain=BD-a59 na latest Complete Genome Major Full 2011-11-17 ASM23391v4 Chung-Ang Univ. GCA_000233915.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/915/GCF_000233915.3_ASM23391v4/ na na na haploid bacteria 3452554 3452554 67.500000 1 1 1 NCBI RefSeq GCF_000233915.3-RS_2026_05_05 2026-05-05 3215 3092 59 22207748 GCF_000233955.1 PRJNA224116 SAMN00189150 AFFY00000000.1 reference genome 762968 454154 Paraprevotella clara YIT 11840 strain=YIT 11840 na latest Scaffold Major Full 2011-11-07 ASM23395v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000233955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/955/GCF_000233955.1_ASM23395v1/ na assembly from type material na haploid bacteria 4233768 4231335 48.000000 0 166 231 NCBI RefSeq GCF_000233955.1-RS_2026_01_08 2026-01-08 3468 3330 71 na GCF_000233975.1 PRJNA224116 SAMN02471547 AGSM00000000.1 na 1082932 358 Agrobacterium tumefaciens CCNWGS0286 strain=CCNWGS0286 na latest Contig Major Full 2011-11-04 ASM23397v2 Northwest A&F University GCA_000233975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/975/GCF_000233975.1_ASM23397v2/ na na na haploid bacteria 5214870 5214870 59.500000 0 49 49 NCBI RefSeq GCF_000233975.1-RS_2025_05_29 2025-05-29 4937 4817 55 22636006 GCF_000233995.1 PRJNA224116 SAMN02471575 AGSN00000000.1 na 1082933 71433 Mesorhizobium amorphae CCNWGS0123 strain=CCNWGS0123 na latest Contig Major Full 2011-11-04 ASM23399v1 Northwest A&F University GCA_000233995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/233/995/GCF_000233995.1_ASM23399v1/ na na na haploid bacteria 7293571 7293571 63.000000 0 274 274 NCBI RefSeq GCF_000233995.1-RS_2026_04_23 2026-04-23 7095 6755 56 22247533 GCF_000234035.1 PRJNA224116 SAMN02463882 AFXO00000000.1 na 883167 1338 Streptococcus intermedius F0413 strain=F0413 na latest Scaffold Major Full 2011-11-08 Stre_inte_F0413_V1 Broad Institute GCA_000234035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/035/GCF_000234035.1_Stre_inte_F0413_V1/ na na na haploid bacteria 1922374 1921347 37.500000 0 8 13 NCBI RefSeq GCF_000234035.1-RS_2026_01_30 2026-01-30 1976 1811 71 na GCF_000234055.1 PRJNA224116 SAMN02463875 AFXP00000000.1 na 857291 470565 Prevotella histicola F0411 strain=F0411 na latest Scaffold Major Full 2011-11-08 Prev_hist_F0411_V1 Broad Institute GCA_000234055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/055/GCF_000234055.1_Prev_hist_F0411_V1/ na na na haploid bacteria 2992428 2987441 41.000000 0 17 39 NCBI RefSeq GCF_000234055.1-RS_2026_01_08 2026-01-08 2435 2290 61 na GCF_000234095.1 PRJNA224116 SAMN02463814 ACZM00000000.1 reference genome 679201 135082 Centipeda infelix ATCC 43532 strain=ATCC 43532 na latest Scaffold Major Full 2011-11-08 Sele_infe_ATCC_43532_V1 Broad Institute GCA_000234095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/095/GCF_000234095.1_Sele_infe_ATCC_43532_V1/ na assembly from type material na haploid bacteria 2413634 2409106 56.000000 0 30 46 NCBI RefSeq GCF_000234095.1-RS_2026_05_01 2026-05-01 2314 2198 82 na GCF_000234115.1 PRJNA224116 SAMN02463812 ACZK00000000.1 na 679199 671218 Alloprevotella rava F0323 strain=F0323 na latest Scaffold Major Full 2011-11-08 Prevotella_sp_F0323_V1 Broad Institute GCA_000234115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/115/GCF_000234115.1_Prevotella_sp_F0323_V1/ na na na haploid bacteria 2593873 2588570 45.500000 0 30 57 NCBI RefSeq GCF_000234115.1-RS_2026_03_31 2026-03-31 2122 1963 70 na GCF_000234135.1 PRJNA224116 SAMN02463846 ADGH00000000.1 na 702437 135083 Centipeda noxia F0398 strain=F0398 na latest Scaffold Major Full 2011-11-08 Sele_noxi_F0398_V1 Broad Institute GCA_000234135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/135/GCF_000234135.1_Sele_noxi_F0398_V1/ na na na haploid bacteria 2113402 2107556 55.500000 0 13 26 NCBI RefSeq GCF_000234135.1-RS_2025_12_04 2025-12-04 2054 1968 73 na GCF_000234155.1 PRJNA224116 SAMN02463854 ADLL00000000.1 na 742735 1531 [Clostridium] clostridioforme 2_1_49FAA strain=2_1_49FAA na latest Scaffold Major Full 2011-11-08 Clos_clos_2_1_49FAA_V1 Broad Institute GCA_000234155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/155/GCF_000234155.1_Clos_clos_2_1_49FAA_V1/ na na na haploid bacteria 5500475 5455952 49.000000 0 69 148 NCBI RefSeq GCF_000234155.1-RS_2026_02_27 2026-02-27 5492 5156 95 na GCF_000234175.1 PRJNA224116 SAMN02463864 ADLY00000000.1 na 742813 41997 Enterococcus saccharolyticus 30_1 strain=30_1 na latest Scaffold Major Full 2011-11-08 Ente_sacc_30_1_V1 Broad Institute GCA_000234175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/175/GCF_000234175.1_Ente_sacc_30_1_V1/ na na na haploid bacteria 3137657 3119200 40.500000 0 16 61 NCBI RefSeq GCF_000234175.1-RS_2025_03_13 2025-03-13 3065 2877 80 na GCF_000234215.1 PRJNA224116 SAMN02952921 AGTG00000000.1 na 926027 562 Escherichia coli O157:H- str. 493-89 strain=493-89 na latest Contig Major Full 2011-11-04 ASM23421v2 US FDA GCA_000234215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/215/GCF_000234215.1_ASM23421v2/ na na na haploid bacteria 5359584 5359584 50.500000 0 351 351 NCBI RefSeq GCF_000234215.1-RS_2025_06_13 2025-06-13 5591 5143 90 na GCF_000234235.1 PRJNA224116 SAMN02952922 AGTH00000000.1 na 1078029 562 Escherichia coli O113:H21 str. CL-3 strain=CL-3 na latest Contig Major Full 2011-11-04 ASM23423v2 US FDA GCA_000234235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/235/GCF_000234235.1_ASM23423v2/ na na na haploid bacteria 5048206 5048206 50.500000 0 258 258 NCBI RefSeq GCF_000234235.1-RS_2025_06_13 2025-06-13 5112 4778 89 na GCF_000234255.2 PRJNA224116 SAMN02952923 AGTI00000000.1 na 1078030 562 Escherichia coli O91:H21 str. B2F1 strain=B2F1 na latest Contig Minor Full 2011-11-04 ASM23425v3 US FDA GCA_000234255.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/255/GCF_000234255.2_ASM23425v3/ na na na haploid bacteria 5004744 5004744 50.500000 0 232 232 NCBI RefSeq GCF_000234255.2-RS_2025_06_14 2025-06-14 5064 4730 98 na GCF_000234275.2 PRJNA224116 SAMN02952924 AGTJ00000000.1 na 1078031 562 Escherichia coli O121:H19 str. MT#2 strain=MT#2 na latest Contig Minor Full 2011-11-04 ASM23427v3 US FDA GCA_000234275.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/275/GCF_000234275.2_ASM23427v3/ na na na haploid bacteria 5250833 5250833 50.500000 0 388 388 NCBI RefSeq GCF_000234275.2-RS_2025_06_14 2025-06-14 5466 5002 98 na GCF_000234295.1 PRJNA224116 SAMN02952925 AGTK00000000.1 na 1078033 562 Escherichia coli O45:H2 str. 03-EN-705 strain=03-EN-705 na latest Contig Major Full 2011-11-04 ASM23429v2 US FDA GCA_000234295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/295/GCF_000234295.1_ASM23429v2/ na na na haploid bacteria 5302194 5302194 50.500000 0 433 433 NCBI RefSeq GCF_000234295.1-RS_2025_06_14 2025-06-14 5639 5164 98 na GCF_000234315.1 PRJNA224116 SAMN02952926 AGTL00000000.1 na 1078035 562 Escherichia coli O145:H28 str. 4865/96 strain=4865/96 na latest Contig Major Full 2011-11-04 ASM23431v2 US FDA GCA_000234315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/315/GCF_000234315.1_ASM23431v2/ na na na haploid bacteria 5225904 5225904 50.500000 0 345 345 NCBI RefSeq GCF_000234315.1-RS_2025_06_13 2025-06-13 5367 4917 98 na GCF_000234335.1 PRJNA224116 SAMN02596738 AGVD00000000.1 na 543736 37919 Rhodococcus opacus PD630 strain=PD630 na latest Scaffold Major Full 2011-11-10 ASM23433v1 Broad Institute GCA_000234335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/335/GCF_000234335.1_ASM23433v1/ na na na haploid bacteria 9267334 9149864 67.000000 0 282 491 NCBI RefSeq GCF_000234335.1-RS_2025_08_01 2025-08-01 8519 8146 58 21931557 GCF_000234355.1 PRJNA224116 SAMN02470912 AGQV00000000.1 reference genome 1088869 479935 Gluconobacter morbifer G707 strain=G707 na latest Contig Major Full 2011-11-04 ASM23435v1 Seoul National University, Republic of Korea GCA_000234355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/355/GCF_000234355.1_ASM23435v1/ na assembly from type material na haploid bacteria 2887061 2887061 59.000000 0 19 19 NCBI RefSeq GCF_000234355.1-RS_2025_12_15 2025-12-15 2749 2644 54 na GCF_000234375.1 PRJNA224116 SAMN00262219 AGUI00000000.1 na 991950 666 Vibrio cholerae HC-06A1 strain=HC-06A1 na latest Contig Major Full 2011-11-04 ASM23437v2 Institute for Genome Sciences GCA_000234375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/375/GCF_000234375.1_ASM23437v2/ na na na haploid bacteria 4028197 4028197 47.500000 0 128 128 NCBI RefSeq GCF_000234375.1-RS_2026_06_29 2026-06-29 3708 3561 93 na GCF_000234395.1 PRJNA224116 SAMN00222984 AGUM00000000.1 na 991933 666 Vibrio cholerae HC-23A1 strain=HC-23A1 na latest Contig Major Full 2011-11-04 ASM23439v2 Institute for Genome Sciences GCA_000234395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/395/GCF_000234395.1_ASM23439v2/ na na na haploid bacteria 4099188 4099188 47.500000 0 15 15 NCBI RefSeq GCF_000234395.1-RS_2026_05_27 2026-05-27 3768 3570 147 na GCF_000234415.1 PRJNA224116 SAMN00262252 AGUN00000000.1 na 991955 666 Vibrio cholerae HC-28A1 strain=HC-28A1 na latest Contig Major Full 2011-11-04 ASM23441v2 Institute for Genome Sciences GCA_000234415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/415/GCF_000234415.1_ASM23441v2/ na na na haploid bacteria 4027641 4027641 47.500000 0 138 138 NCBI RefSeq GCF_000234415.1-RS_2026_06_29 2026-06-29 3701 3565 82 na GCF_000234435.1 PRJNA224116 SAMN02435809 AGUQ00000000.1 na 991938 666 Vibrio cholerae HC-43A1 strain=HC-43A1 na latest Contig Major Full 2011-11-04 ASM23443v2 Institute for Genome Sciences GCA_000234435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/435/GCF_000234435.1_ASM23443v2/ na na na haploid bacteria 4053234 4053234 47.500000 0 19 19 NCBI RefSeq GCF_000234435.1-RS_2026_04_21 2026-04-21 3731 3567 108 na GCF_000234455.2 PRJNA224116 SAMN00222981 AGUS00000000.1 na 991942 666 Vibrio cholerae HC-61A1 strain=HC-61A1 na latest Contig Minor Full 2011-11-04 ASM23445v3 Institute for Genome Sciences GCA_000234455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/455/GCF_000234455.2_ASM23445v3/ na na na haploid bacteria 4067936 4067936 47.500000 0 21 21 NCBI RefSeq GCF_000234455.2-RS_2026_05_27 2026-05-27 3738 3552 125 na GCF_000234525.1 PRJNA224116 SAMN02470549 AGTE00000000.1 na 1093788 197 Campylobacter jejuni subsp. jejuni NW strain=NW na latest Scaffold Major Full 2011-11-08 ASM23452v1 Comparative Enteric Diseases Laboratory, Michigan State University GCA_000234525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/525/GCF_000234525.1_ASM23452v1/ na na na haploid bacteria 1652701 1652691 30.500000 0 59 60 NCBI RefSeq GCF_000234525.1-RS_2025_07_08 2025-07-08 1751 1619 46 23012285 GCF_000234545.1 PRJNA224116 SAMN02470551 AGTF00000000.1 na 1093789 197 Campylobacter jejuni subsp. jejuni D2600 strain=D2600 na latest Scaffold Major Full 2011-11-08 ASM23454v1 Comparative Enteric Diseases Laboratory, Michigan State University GCA_000234545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/545/GCF_000234545.1_ASM23454v1/ na na na haploid bacteria 1622415 1622329 30.500000 0 51 56 NCBI RefSeq GCF_000234545.1-RS_2025_06_27 2025-06-27 1700 1566 45 23012285 GCF_000234585.1 PRJNA224116 SAMN02471087 AGVE00000000.1 na 1078020 1797 Mycolicibacterium thermoresistibile ATCC 19527 strain=ATCC 19527 na latest Contig Major Full 2011-11-07 ASM23458v1 Texas A&M University GCA_000234585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/585/GCF_000234585.1_ASM23458v1/ na assembly from type material na haploid bacteria 4870742 4870742 69.000000 0 56 56 NCBI RefSeq GCF_000234585.1-RS_2025_07_07 2025-07-07 4681 4521 51 na GCF_000234605.1 PRJNA224116 SAMN02470714 AGSG00000000.1 na 1101440 562 Escherichia coli O103:H25 str. NIPH-11060424 strain=NIPH-11060424 na latest Contig Major Full 2011-11-07 ASM23460v2 NVH/NVI/NIPH/NOFIMA GCA_000234605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/605/GCF_000234605.1_ASM23460v2/ na na na haploid bacteria 5159902 5159902 50.500000 0 491 491 NCBI RefSeq GCF_000234605.1-RS_2026_05_23 2026-05-23 5419 4931 84 22403614 GCF_000234725.1 PRJNA224116 SAMN02604104 na na 717522 1773 Mycobacterium tuberculosis variant bovis BCG str. Mexico strain=Mexico na latest Complete Genome Major Full 2011-11-09 ASM23472v1 Universidad Nacional Autónoma de México GCA_000234725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/725/GCF_000234725.1_ASM23472v1/ na na na haploid bacteria 4350386 4350386 65.500000 1 1 1 NCBI RefSeq GCF_000234725.1-RS_2025_06_29 2025-06-29 4086 3792 51 21981907 GCF_000234745.1 PRJNA224116 SAMN02603284 na na 1075089 747 Pasteurella multocida 36950 strain=36950 na latest Complete Genome Major Full 2011-11-09 ASM23474v1 Goettingen Genomics Laboratory GCA_000234745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/745/GCF_000234745.1_ASM23474v1/ na na na haploid bacteria 2349518 2349518 40.500000 1 1 1 NCBI RefSeq GCF_000234745.1-RS_2025_09_05 2025-09-05 2212 2081 77 22001176 GCF_000234765.1 PRJNA224116 SAMEA2272663 CAFW00000000.1 na 1110505 160386 Corynebacterium casei UCMA 3821 strain=UCMA 3821 na latest Contig Major Full 2011-11-09 ASM23476v1 Institut National de la Recherche Agronomique (INRA) GCA_000234765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/765/GCF_000234765.1_ASM23476v1/ na na na haploid bacteria 3112736 3112736 55.500000 0 106 106 NCBI RefSeq GCF_000234765.1-RS_2026_04_23 2026-04-23 2970 2803 60 na GCF_000234805.1 PRJNA224116 SAMN02603094 na reference genome 1104324 1104324 Pyrobaculum ferrireducens strain=1860 na latest Complete Genome Major Full 2011-11-10 ASM23480v1 Centre Bioengineering RAS GCA_000234805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/805/GCF_000234805.1_ASM23480v1/ na assembly from type material na haploid archaea 2467972 2467972 57.000000 1 1 1 NCBI RefSeq GCF_000234805.1-RS_2026_03_30 2026-03-30 2848 2765 50 22247528 GCF_000234825.3 PRJNA224116 SAMN02603136 na na 1107880 1245 Leuconostoc mesenteroides subsp. mesenteroides J18 strain=J18 na latest Complete Genome Major Full 2015-11-05 ASM23482v3 Chung-Ang University GCA_000234825.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/825/GCF_000234825.3_ASM23482v3/ na na na haploid bacteria 2017261 2017261 37.500000 5 5 5 NCBI RefSeq GCF_000234825.3-RS_2026_04_15 2026-04-15 2020 1914 85 22247530 GCF_000234845.1 PRJNA224116 SAMN02469939 AGVO00000000.1 na 1076135 645 Aeromonas salmonicida subsp. salmonicida 01-B526 strain=01-B526 na latest Contig Major Full 2011-11-10 ASM23484v2 IBIS, Université Laval GCA_000234845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/845/GCF_000234845.1_ASM23484v2/ na na na haploid bacteria 4927927 4927927 58.500000 0 604 604 NCBI RefSeq GCF_000234845.1-RS_2025_08_06 2025-08-06 5014 4343 424 22247525 GCF_000234865.1 PRJNA224116 SAMN00262259 AGUR00000000.1 na 991966 666 Vibrio cholerae HC-48B2 strain=HC-48B2 na latest Scaffold Major Full 2011-11-10 ASM23486v1 Institute for Genome Sciences GCA_000234865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/865/GCF_000234865.1_ASM23486v1/ na na na haploid bacteria 4024820 4023462 47.500000 0 166 202 NCBI RefSeq GCF_000234865.1-RS_2026_06_15 2026-06-15 3694 3555 78 na GCF_000234885.1 PRJNA224116 SAMN00262261 AGUP00000000.1 na 991957 666 Vibrio cholerae HC-33A2 strain=HC-33A2 na latest Scaffold Major Full 2011-11-10 ASM23488v1 Institute for Genome Sciences GCA_000234885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/885/GCF_000234885.1_ASM23488v1/ na na na haploid bacteria 4024727 4022874 47.500000 0 64 103 NCBI RefSeq GCF_000234885.1-RS_2026_06_06 2026-06-06 3688 3554 80 na GCF_000234905.1 PRJNA224116 SAMN00262264 AGUO00000000.1 na 991956 666 Vibrio cholerae HC-32A1 strain=HC-32A1 na latest Scaffold Major Full 2011-11-10 ASM23490v1 Institute for Genome Sciences GCA_000234905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/905/GCF_000234905.1_ASM23490v1/ na na na haploid bacteria 4033209 4031066 47.500000 0 79 114 NCBI RefSeq GCF_000234905.1-RS_2026_05_03 2026-05-03 3703 3561 91 na GCF_000234925.1 PRJNA224116 SAMN00262257 AGUL00000000.1 na 991954 666 Vibrio cholerae HC-22A1 strain=HC-22A1 na latest Scaffold Major Full 2011-11-10 ASM23492v1 Institute for Genome Sciences GCA_000234925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/925/GCF_000234925.1_ASM23492v1/ na na na haploid bacteria 4034031 4031777 47.500000 0 86 123 NCBI RefSeq GCF_000234925.1-RS_2026_06_01 2026-06-01 3692 3560 79 na GCF_000234945.1 PRJNA224116 SAMN00262263 AGUK00000000.1 na 991953 666 Vibrio cholerae HC-21A1 strain=HC-21A1 na latest Scaffold Major Full 2011-11-10 ASM23494v1 Institute for Genome Sciences GCA_000234945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/945/GCF_000234945.1_ASM23494v1/ na na na haploid bacteria 4030433 4027565 47.500000 0 96 133 NCBI RefSeq GCF_000234945.1-RS_2026_05_29 2026-05-29 3700 3564 83 na GCF_000234965.1 PRJNA224116 SAMN00262260 AGUJ00000000.1 na 991952 666 Vibrio cholerae HC-19A1 strain=HC-19A1 na latest Scaffold Major Full 2011-11-10 ASM23496v1 Institute for Genome Sciences GCA_000234965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/234/965/GCF_000234965.1_ASM23496v1/ na na na haploid bacteria 4033401 4030119 47.500000 0 96 133 NCBI RefSeq GCF_000234965.1-RS_2026_06_04 2026-06-04 3722 3573 95 na GCF_000235045.1 PRJNA224116 SAMN00715312 AFVE00000000.1 na 1068621 562 Escherichia coli O104:H4 str. 11-4632 C5 strain=11-4632 C5 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4632_C5_V2 Broad Institute GCA_000235045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/045/GCF_000235045.1_Esch_coli_11-4632_C5_V2/ na na na haploid bacteria 5417891 5393275 50.500000 0 9 47 NCBI RefSeq GCF_000235045.1-RS_2025_06_14 2025-06-14 5370 4984 110 22315421 GCF_000235065.1 PRJNA224116 SAMN00715311 AFVD00000000.1 na 1068620 562 Escherichia coli O104:H4 str. 11-4632 C4 strain=11-4632 C4 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4632_C4_V2 Broad Institute GCA_000235065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/065/GCF_000235065.1_Esch_coli_11-4632_C4_V2/ na na na haploid bacteria 5424588 5391087 50.500000 0 7 54 NCBI RefSeq GCF_000235065.1-RS_2025_06_14 2025-06-14 5365 4966 114 22315421 GCF_000235085.1 PRJNA224116 SAMN00715310 AFVC00000000.1 na 1068619 562 Escherichia coli O104:H4 str. 11-4632 C3 strain=11-4632 C3 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4632_C3_V2 Broad Institute GCA_000235085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/085/GCF_000235085.1_Esch_coli_11-4632_C3_V2/ na na na haploid bacteria 5414920 5374199 50.500000 0 9 56 NCBI RefSeq GCF_000235085.1-RS_2025_06_13 2025-06-13 5332 4938 113 22315421 GCF_000235105.1 PRJNA224116 SAMN00715309 AFVB00000000.1 na 1068618 562 Escherichia coli O104:H4 str. 11-4632 C2 strain=11-4632 C2 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4632_C2_V2 Broad Institute GCA_000235105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/105/GCF_000235105.1_Esch_coli_11-4632_C2_V2/ na na na haploid bacteria 5433701 5392282 50.500000 0 7 54 NCBI RefSeq GCF_000235105.1-RS_2025_06_14 2025-06-14 5360 4972 117 22315421 GCF_000235125.1 PRJNA224116 SAMN00715308 AFVA00000000.1 na 1068617 562 Escherichia coli O104:H4 str. 11-4632 C1 strain=11-4632 C1 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4632_C1_V2 Broad Institute GCA_000235125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/125/GCF_000235125.1_Esch_coli_11-4632_C1_V2/ na na na haploid bacteria 5414783 5382866 50.500000 0 9 58 NCBI RefSeq GCF_000235125.1-RS_2025_06_14 2025-06-14 5354 4965 111 22315421 GCF_000235145.1 PRJNA224116 SAMN00715307 AFUZ00000000.1 na 1068616 562 Escherichia coli O104:H4 str. 11-4623 strain=11-4623 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4623_V2 Broad Institute GCA_000235145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/145/GCF_000235145.1_Esch_coli_11-4623_V2/ na na na haploid bacteria 5422225 5399206 50.500000 0 8 52 NCBI RefSeq GCF_000235145.1-RS_2025_06_13 2025-06-13 5370 4981 109 22315421 GCF_000235165.1 PRJNA224116 SAMN00715306 AFUY00000000.1 na 1068615 562 Escherichia coli O104:H4 str. 11-4522 strain=11-4522 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4522_V2 Broad Institute GCA_000235165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/165/GCF_000235165.1_Esch_coli_11-4522_V2/ na na na haploid bacteria 5402160 5376981 50.500000 0 8 57 NCBI RefSeq GCF_000235165.1-RS_2025_06_13 2025-06-13 5339 4956 106 22315421 GCF_000235185.1 PRJNA224116 SAMN00715305 AFUX00000000.1 na 1068614 562 Escherichia coli O104:H4 str. 11-4404 strain=11-4404 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-4404_V2 Broad Institute GCA_000235185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/185/GCF_000235185.1_Esch_coli_11-4404_V2/ na na na haploid bacteria 5417280 5385681 50.500000 0 11 58 NCBI RefSeq GCF_000235185.1-RS_2025_06_13 2025-06-13 5367 4964 118 22315421 GCF_000235205.1 PRJNA224116 SAMN00715303 AFRM00000000.1 na 1048334 562 Escherichia coli O104:H4 str. 11-3677 strain=11-3677 na latest Scaffold Major Full 2011-11-18 Esch_coli_11-3677_V2 Broad Institute GCA_000235205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/205/GCF_000235205.1_Esch_coli_11-3677_V2/ na na na haploid bacteria 5419417 5404111 50.500000 0 14 30 NCBI RefSeq GCF_000235205.1-RS_2025_06_13 2025-06-13 5374 4972 116 22315421 GCF_000235225.1 PRJNA224116 SAMN00715302 AFRK00000000.1 na 1048266 562 Escherichia coli O104:H4 str. 09-7901 strain=09-7901 na latest Scaffold Major Full 2011-11-18 Esch_coli_09-7901_V2 Broad Institute GCA_000235225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/225/GCF_000235225.1_Esch_coli_09-7901_V2/ na na na haploid bacteria 5300068 5288048 50.500000 0 10 17 NCBI RefSeq GCF_000235225.1-RS_2025_06_13 2025-06-13 5261 4869 120 22315421 GCF_000235245.1 PRJNA224116 SAMN00715301 AFRL00000000.1 na 1048265 562 Escherichia coli O104:H4 str. 04-8351 strain=04-8351 na latest Scaffold Major Full 2011-11-18 Esch_coli_04-8351_V2 Broad Institute GCA_000235245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/245/GCF_000235245.1_Esch_coli_04-8351_V2/ na na na haploid bacteria 5415446 5389145 50.500000 0 7 25 NCBI RefSeq GCF_000235245.1-RS_2025_06_14 2025-06-14 5383 4998 110 22315421 GCF_000235265.1 PRJNA224116 SAMN00715300 AFRI00000000.1 na 1048256 562 Escherichia coli O104:H4 str. C236-11 strain=C236-11 na latest Scaffold Major Full 2011-11-18 Esch_coli_C236-11_V2 Broad Institute GCA_000235265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/265/GCF_000235265.1_Esch_coli_C236-11_V2/ na na na haploid bacteria 5407470 5398212 50.500000 0 6 18 NCBI RefSeq GCF_000235265.1-RS_2025_06_14 2025-06-14 5358 4973 111 22315421 GCF_000235285.1 PRJNA224116 SAMN00715316 AFRH00000000.1 na 1048254 562 Escherichia coli O104:H4 str. C227-11 strain=C227-11 na latest Scaffold Major Full 2011-11-18 Esch_coli_C227-11_V2 Broad Institute GCA_000235285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/285/GCF_000235285.1_Esch_coli_C227-11_V2/ na na na haploid bacteria 5413634 5386829 50.500000 0 11 26 NCBI RefSeq GCF_000235285.1-RS_2025_06_13 2025-06-13 5355 4951 121 22315421 GCF_000235365.1 PRJNA78153 SAMN03081426 na reference genome 931890 45285 Eremothecium cymbalariae DBVPG#7215 strain=DBVPG#7215 na latest Chromosome Major Full 2011-11-14 ASM23536v1 Carlsberg Laboratory GCA_000235365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/365/GCF_000235365.1_ASM23536v1/ na na na haploid fungi 9669424 9669411 40.500000 8 8 9 Carlsberg Laboratory Annotation submitted by Carlsberg Laboratory 2025-07-15 4851 4432 151 22384365 GCF_000235405.2 PRJNA224116 SAMN02232021 na reference genome 771875 93466 Fervidobacterium pennivorans DSM 9078 strain=DSM 9078 na latest Complete Genome Major Full 2012-04-02 ASM23540v3 DOE Joint Genome Institute GCA_000235405.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/405/GCF_000235405.2_ASM23540v3/ na assembly from type material na haploid bacteria 2166381 2166381 39.000000 1 1 1 NCBI RefSeq GCF_000235405.2-RS_2026_05_01 2026-05-01 2056 1979 57 na GCF_000235425.2 PRJNA224116 SAMN02256511 AGJN00000000.2 reference genome 298655 298655 Pseudofrankia saprophytica strain=CN3 na latest Scaffold Major Full 2014-01-16 ASM23542v3 DOE Joint Genome Institute GCA_000235425.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/425/GCF_000235425.2_ASM23542v3/ na assembly from type material na haploid bacteria 9978592 9966592 72.000000 0 2 122 NCBI RefSeq GCF_000235425.2-RS_2026_04_29 2026-04-29 8272 8032 74 23516212 GCF_000235445.1 PRJNA224116 SAMN02463813 ACZL00000000.1 reference genome 679200 43995 Johnsonella ignava ATCC 51276 strain=ATCC 51276 na latest Scaffold Major Full 2011-11-16 John_igna_ATCC_51276_V1 Broad Institute GCA_000235445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/445/GCF_000235445.1_John_igna_ATCC_51276_V1/ na assembly from type material na haploid bacteria 2687075 2672404 35.500000 0 43 80 NCBI RefSeq GCF_000235445.1-RS_2025_12_13 2025-12-13 2433 2275 63 na GCF_000235465.1 PRJNA224116 SAMN02299438 AGAD00000000.1 na 861452 712288 Fusobacterium sp. oral taxon 370 str. F0437 strain=F0437 na latest Scaffold Major Full 2011-11-16 ASM23546v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000235465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/465/GCF_000235465.1_ASM23546v1/ na na na haploid bacteria 2093299 2081834 27.500000 0 133 287 NCBI RefSeq GCF_000235465.1-RS_2024_08_13 2024-08-13 2123 1806 40 na GCF_000235485.1 PRJNA224116 SAMN02299440 AGAE00000000.1 na 861455 712622 Streptococcus sp. oral taxon 058 str. F0407 strain=F0407 na latest Scaffold Major Full 2011-11-16 ASM23548v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000235485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/485/GCF_000235485.1_ASM23548v1/ na na na haploid bacteria 1848904 1847468 41.000000 0 22 58 NCBI RefSeq GCF_000235485.1-RS_2025_08_25 2025-08-25 1867 1765 39 na GCF_000235505.1 PRJNA224116 SAMN02463855 ADLN00000000.1 na 742737 154046 Hungatella hathewayi WAL-18680 strain=WAL-18680 na latest Scaffold Major Full 2011-11-16 Clos_hath_WAL_18680_V1 Broad Institute GCA_000235505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/505/GCF_000235505.1_Clos_hath_WAL_18680_V1/ na na na haploid bacteria 5697783 5654180 50.000000 0 18 142 NCBI RefSeq GCF_000235505.1-RS_2025_06_23 2025-06-23 5281 5099 80 na GCF_000235565.1 PRJNA224116 SAMN02603883 na reference genome 1110509 301375 Methanothrix harundinacea 6Ac strain=6Ac na latest Complete Genome Major Full 2011-11-16 ASM23556v1 State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences GCA_000235565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/565/GCF_000235565.1_ASM23556v1/ na na na haploid archaea 2571034 2571034 60.500000 2 2 2 NCBI RefSeq GCF_000235565.1-RS_2025_11_20 2025-11-20 2568 2499 51 22590603 GCF_000235585.1 PRJNA224116 SAMN02603583 na reference genome 985665 159743 Paenibacillus terrae HPL-003 strain=HPL-003 na latest Complete Genome Major Full 2011-11-16 ASM23558v1 Macrogen Inc. GCA_000235585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/585/GCF_000235585.1_ASM23558v1/ na na na haploid bacteria 6083395 6083395 47.000000 1 1 1 NCBI RefSeq GCF_000235585.1-RS_2026_03_27 2026-03-27 5537 5259 122 22328761 GCF_000235605.1 PRJNA224116 SAMN02261424 na reference genome 768706 1563 Desulfosporosinus orientis DSM 765 strain=DSM 765 na latest Complete Genome Major Full 2011-11-16 ASM23560v1 JGI GCA_000235605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/605/GCF_000235605.1_ASM23560v1/ na assembly from type material na haploid bacteria 5863081 5863081 43.000000 1 1 1 NCBI RefSeq GCF_000235605.1-RS_2026_05_13 2026-05-13 5579 5369 103 23105050 GCF_000235625.1 PRJNA224116 SAMN02471017 AGTR00000000.1 na 1094979 1150997 Marinobacter manganoxydans MnI7-9 strain=MnI7-9 na latest Contig Major Full 2011-11-16 ASM23562v1 Huazhong Agricultural University GCA_000235625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/625/GCF_000235625.1_ASM23562v1/ na na na haploid bacteria 4549590 4549590 57.500000 0 88 88 NCBI RefSeq GCF_000235625.1-RS_2025_01_31 2025-01-31 4207 4080 55 22275098 GCF_000235645.1 PRJNA224116 SAMN02428990 AEUN00000000.1 na 911238 308354 Staphylococcus simiae CCM 7213 = CCUG 51256 strain=CCM 7213 na latest Contig Major Full 2011-11-16 ASM23564v1 Cornell University GCA_000235645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/645/GCF_000235645.1_ASM23564v1/ na assembly from type material na haploid bacteria 2587121 2587121 32.000000 0 565 565 NCBI RefSeq GCF_000235645.1-RS_2026_01_23 2026-01-23 2514 2333 65 22272658 GCF_000235665.1 PRJNA224116 SAMN02471692 AESD00000000.1 na 423471 263511 Crocosphaera watsonii WH 0003 strain=WH 0003 na latest Contig Major Full 2011-11-16 ASM23566v2 University of California at Santa Cruz GCA_000235665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/665/GCF_000235665.1_ASM23566v2/ na na na haploid bacteria 5890504 5890504 37.500000 0 1126 1126 NCBI RefSeq GCF_000235665.1-RS_2026_03_11 2026-03-11 6068 5589 48 22232617 GCF_000235705.1 PRJNA224116 SAMN02469461 AGBU00000000.1 na 1074451 28038 Latilactobacillus curvatus CRL 705 strain=CRL 705 na latest Contig Major Full 2011-10-26 ASM23570v1 CERELA-CONICET GCA_000235705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/705/GCF_000235705.1_ASM23570v1/ na na na haploid bacteria 1838358 1838358 42.000000 0 145 145 NCBI RefSeq GCF_000235705.1-RS_2026_01_27 2026-01-27 1918 1767 61 22207745 GCF_000235725.1 PRJNA224116 SAMN02471546 AGIB00000000.1 na 550984 550984 Halomonas sp. HAL1 strain=HAL1 na latest Contig Major Full 2011-10-11 ASM23572v1 Soil, Water and Environmental Science, University of Arizona GCA_000235725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/725/GCF_000235725.1_ASM23572v1/ na na na haploid bacteria 4351324 4351324 54.000000 0 102 102 NCBI RefSeq GCF_000235725.1-RS_2025_08_27 2025-08-27 4139 4011 73 22156396 GCF_000235745.1 PRJNA224116 SAMN02470922 AGSX00000000.1 na 1109445 316 Stutzerimonas stutzeri SDM-LAC strain=SDM-LAC na latest Contig Major Full 2011-11-17 ASM23574v2 Shan Dong University GCA_000235745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/745/GCF_000235745.1_ASM23574v2/ na na na haploid bacteria 4233213 4233213 60.500000 0 199 199 NCBI RefSeq GCF_000235745.1-RS_2025_02_01 2025-02-01 3983 3833 60 22275095 GCF_000235765.1 PRJNA224116 SAMN02603521 na na 1104326 550 Enterobacter cloacae subsp. dissolvens SDM strain=SDM na latest Complete Genome Major Full 2012-06-20 ASM23576v3 Shan Dong University GCA_000235765.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/765/GCF_000235765.1_ASM23576v3/ na na na haploid bacteria 4968248 4968248 55.000000 1 1 1 NCBI RefSeq GCF_000235765.1-RS_2026_03_28 2026-03-28 4713 4513 110 22275097 GCF_000235785.1 PRJNA224116 SAMN02469944 AGKC00000000.1 na 880592 47715 Lacticaseibacillus rhamnosus R0011 strain=R0011 na latest Contig Major Full 2011-11-18 ASM23578v2 Institut Rosell Lallemand Inc. GCA_000235785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/785/GCF_000235785.1_ASM23578v2/ na na na haploid bacteria 2900620 2900620 46.500000 0 10 10 NCBI RefSeq GCF_000235785.1-RS_2026_03_24 2026-03-24 2739 2630 68 22275100 GCF_000235805.1 PRJNA224116 SAMN02469945 AGKB00000000.1 na 1080365 1254 Pediococcus acidilactici MA18/5M strain=MA18/5M na latest Contig Major Full 2011-11-18 ASM23580v2 Institut Rosell Lallemand Inc. GCA_000235805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/805/GCF_000235805.1_ASM23580v2/ na na na haploid bacteria 1989583 1989583 42.000000 0 10 10 NCBI RefSeq GCF_000235805.1-RS_2025_09_05 2025-09-05 1930 1834 76 22275099 GCF_000235825.1 PRJNA224116 SAMN02299444 AGAA00000000.1 na 997827 1496 Clostridioides difficile 002-P50-2011 strain=002-P50-2011 na latest Scaffold Major Full 2011-11-18 ASM23582v1 Washington University Genome Center GCA_000235825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/825/GCF_000235825.1_ASM23582v1/ na na na haploid bacteria 4103061 4101884 28.500000 0 79 95 NCBI RefSeq GCF_000235825.1-RS_2026_03_03 2026-03-03 3782 3714 20 na GCF_000235865.1 PRJNA224116 SAMN02299451 AFZY00000000.1 na 1002365 47715 Lacticaseibacillus rhamnosus ATCC 21052 strain=ATCC 21052 na latest Scaffold Major Full 2011-11-18 ASM23586v1 Washington University Genome Center GCA_000235865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/865/GCF_000235865.1_ASM23586v1/ na na na haploid bacteria 2877033 2870765 46.500000 0 42 123 NCBI RefSeq GCF_000235865.1-RS_2025_09_10 2025-09-10 2743 2647 49 na GCF_000235885.1 PRJNA224116 SAMN02299453 AFZZ00000000.1 reference genome 1002367 363265 Leyella stercorea DSM 18206 strain=DSM 18206 na latest Scaffold Major Full 2011-11-18 ASM23588v1 Washington University Genome Center GCA_000235885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/885/GCF_000235885.1_ASM23588v1/ na assembly from type material na haploid bacteria 3097322 3092669 49.000000 0 148 263 NCBI RefSeq GCF_000235885.1-RS_2026_01_08 2026-01-08 2708 2594 56 na GCF_000235905.1 PRJNA224116 SAMN02299455 AGAC00000000.1 na 1002369 1496 Clostridioides difficile 70-100-2010 strain=70-100-2010 na latest Scaffold Major Full 2011-11-18 ASM23590v1 Washington University Genome Center GCA_000235905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/905/GCF_000235905.1_ASM23590v1/ na na na haploid bacteria 4008217 4005631 28.500000 0 103 133 NCBI RefSeq GCF_000235905.1-RS_2026_03_04 2026-03-04 3651 3573 15 na GCF_000235925.1 PRJNA224116 SAMN02299445 AGAB00000000.1 na 997828 1496 Clostridioides difficile 050-P50-2011 strain=050-P50-2011 na latest Scaffold Major Full 2011-11-18 ASM23592v1 Washington University Genome Center GCA_000235925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/925/GCF_000235925.1_ASM23592v1/ na na na haploid bacteria 4227225 4225929 28.500000 0 65 85 NCBI RefSeq GCF_000235925.1-RS_2026_03_03 2026-03-03 3888 3822 19 na GCF_000235975.1 PRJNA224116 SAMN02470157 AGFM00000000.1 na 1088721 205844 Novosphingobium pentaromativorans US6-1 strain=US6-1 na latest Contig Major Full 2011-11-21 ASM23597v1 Korea Ocean Research & Development Institute GCA_000235975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/975/GCF_000235975.1_ASM23597v1/ na assembly from type material na haploid bacteria 5344974 5344974 63.000000 2 123 123 NCBI RefSeq GCF_000235975.1-RS_2026_03_27 2026-03-27 5106 4967 55 22275104 GCF_000236035.1 PRJNA224116 SAMN02471366 AGQZ00000000.1 reference genome 1072583 223527 Vreelandella boliviensis LC1 strain=LC1 na latest Scaffold Major Full 2011-11-22 KUC0.1 San Simon University GCA_000236035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/035/GCF_000236035.1_KUC0.1/ na assembly from type material na haploid bacteria 4208238 4136366 54.500000 0 21 103 NCBI RefSeq GCF_000236035.1-RS_2025_08_25 2025-08-25 3858 3747 66 na GCF_000236085.2 PRJNA224116 SAMN02470890 AGBZ00000000.2 reference genome 570509 2134 Spiroplasma melliferum KC3 strain=KC3 na latest Contig Major Full 2014-04-22 SpiMel2.0 Research Institute for Physico-Chemical Medicine, Ministry of Public Health and Social Development of Russia GCA_000236085.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/085/GCF_000236085.2_SpiMel2.0/ na na na haploid bacteria 1297943 1297943 27.000000 2 6 6 NCBI RefSeq GCF_000236085.2-RS_2025_12_13 2025-12-13 1315 1254 37 22129229 GCF_000236125.1 PRJNA224116 SAMN02472264 AGVZ00000000.1 na 1107544 358 Agrobacterium tumefaciens 5A strain=5A na latest Contig Major Full 2011-11-23 ASM23612v2 University of Arizona GCA_000236125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/125/GCF_000236125.1_ASM23612v2/ na na na haploid bacteria 5743108 5743108 58.500000 0 50 50 NCBI RefSeq GCF_000236125.1-RS_2026_04_23 2026-04-23 5482 5354 60 22275101 GCF_000236145.1 PRJNA224116 SAMN02469351 AGVT00000000.1 na 1094714 463 Fluoribacter dumoffii Tex-KL strain=Tex-KL na latest Chromosome Major Full 2011-11-29 ASM23614v1 Beijing Genomics Institute GCA_000236145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/145/GCF_000236145.1_ASM23614v1/ na na na haploid bacteria 3761887 3750355 39.500000 2 2 21 NCBI RefSeq GCF_000236145.1-RS_2026_02_06 2026-02-06 3349 3277 52 na GCF_000236165.1 PRJNA224116 SAMN02469353 AGVU00000000.1 reference genome 1094715 463 Fluoribacter dumoffii NY 23 strain=NY 23 na latest Chromosome Major Full 2011-11-29 ASM23616v1 Beijing Genomics Institute GCA_000236165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/165/GCF_000236165.1_ASM23616v1/ na assembly from type material na haploid bacteria 3909670 3894641 39.500000 3 3 32 NCBI RefSeq GCF_000236165.1-RS_2026_06_10 2026-06-10 3502 3412 58 na GCF_000236215.2 PRJNA224116 SAMEA3138403 na na 1055524 95486 Burkholderia cenocepacia H111 strain=H111 na latest Complete Genome Major Full 2014-04-25 ASM23621v4 University of Zurich GCA_000236215.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/215/GCF_000236215.2_ASM23621v4/ na na na haploid bacteria 7714893 7714893 67.500000 3 3 3 NCBI RefSeq GCF_000236215.2-RS_2026_02_11 2026-02-11 7019 6849 88 24723723 GCF_000236255.1 PRJNA224116 SAMN01093721 na na 1112912 29461 Brucella suis VBI22 strain=VBI22 na latest Complete Genome Major Full 2011-11-28 ASM23625v1 Virginia Bioinformatics Institute GCA_000236255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/255/GCF_000236255.1_ASM23625v1/ na na na haploid bacteria 3316088 3316088 57.500000 2 2 2 NCBI RefSeq GCF_000236255.1-RS_2025_08_07 2025-08-07 3231 3029 68 22275106 GCF_000236405.1 PRJNA224116 SAMN02604251 na na 1075399 1075399 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu strain=Cpu na latest Complete Genome Major Full 2011-11-29 ASM23640v1 University of Valencia GCA_000236405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/405/GCF_000236405.1_ASM23640v1/ na na na haploid bacteria 609561 609561 24.000000 2 2 2 NCBI RefSeq GCF_000236405.1-RS_2024_08_22 2024-08-22 595 552 37 22094859 GCF_000236475.1 PRJNA224116 SAMN02603598 na na 1104322 1359 Lactococcus cremoris subsp. cremoris A76 strain=A76 na latest Complete Genome Major Full 2011-12-01 ASM23647v1 MICALIS INRA GCA_000236475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/475/GCF_000236475.1_ASM23647v1/ na na na haploid bacteria 2577104 2577104 36.000000 5 5 5 NCBI RefSeq GCF_000236475.1-RS_2025_09_17 2025-09-17 2665 2386 85 na GCF_000236535.2 PRJNA224116 SAMN02471888 AGQY00000000.1 na 1091039 1363 Lactococcus garvieae LG9 strain=LG9 na latest Contig Minor Full 2011-12-01 LgarvieLg9_1.0 University of Milan-Department of Food Science and Microbiology GCA_000236535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/535/GCF_000236535.2_LgarvieLg9_1.0/ na na na haploid bacteria 2082269 2082269 38.500000 0 139 139 NCBI RefSeq GCF_000236535.2-RS_2026_02_06 2026-02-06 2154 2047 51 22328751 GCF_000236565.1 PRJNA224116 SAMN02470709 AHAM00000000.1 reference genome 1107882 475067 Mesorhizobium alhagi CCNWXJ12-2 strain=CCNWXJ12-2 na latest Contig Major Full 2011-12-01 ASM23656v2 Northwest A&F University GCA_000236565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/565/GCF_000236565.1_ASM23656v2/ na assembly from type material na haploid bacteria 6968952 6968952 62.500000 0 375 375 NCBI RefSeq GCF_000236565.1-RS_2026_03_31 2026-03-31 7068 6686 52 22328758 GCF_000236585.1 PRJNA224116 SAMN02603100 na na 1111069 1111069 Thermus sp. CCB_US3_UF1 strain=CCB_US3_UF1 na latest Complete Genome Major Full 2011-12-02 ASM23658v1 Centre for Chemical Biology (CCB@USM) GCA_000236585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/585/GCF_000236585.1_ASM23658v1/ na na na haploid bacteria 2263488 2263488 68.500000 2 2 2 NCBI RefSeq GCF_000236585.1-RS_2024_08_13 2024-08-13 2331 2252 57 na GCF_000236605.1 PRJNA224116 SAMN02603099 na na 1111068 33941 Geobacillus thermoleovorans CCB_US3_UF5 strain=CCB_US3_UF5 na latest Complete Genome Major Full 2011-12-02 ASM23660v1 Centre for Chemical Biology (CCB@USM) GCA_000236605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/605/GCF_000236605.1_ASM23660v1/ na na na haploid bacteria 3596620 3596620 52.500000 1 1 1 NCBI RefSeq GCF_000236605.1-RS_2026_02_08 2026-02-08 3637 3394 120 na GCF_000236625.2 PRJNA224116 SAMN00761066 AHBC00000000.1 na 1118153 1118153 Halomonas sp. GFAJ-1 strain=ATCC BAA-2256 na latest Contig Minor Full 2011-12-02 GFAJ1_v1 Le Phung GCA_000236625.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/625/GCF_000236625.2_GFAJ1_v1/ na na na haploid bacteria 3613819 3613819 54.000000 0 101 101 NCBI RefSeq GCF_000236625.2-RS_2025_08_27 2025-08-27 3359 3241 73 22408239 GCF_000236645.1 PRJNA224116 SAMN02261085 na na 911045 911045 Pseudovibrio sp. FO-BEG1 strain=FO-BEG1 na latest Chromosome Major Full 2011-12-05 ASM23664v1 Max Planck Institute for Marine Microbiology GCA_000236645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/645/GCF_000236645.1_ASM23664v1/ na na na haploid bacteria 5916782 5916748 52.500000 2 2 3 NCBI RefSeq GCF_000236645.1-RS_2024_08_22 2024-08-22 5327 5212 91 23601235 GCF_000236665.1 PRJNA224116 SAMN02232011 na reference genome 640081 146939 Azospira oryzae PS strain=PS na latest Complete Genome Major Full 2011-12-05 ASM23666v1 US DOE Joint Genome Institute (JGI-PGF) GCA_000236665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/665/GCF_000236665.1_ASM23666v1/ na assembly from heterotypic synonym type material na haploid bacteria 3806980 3806980 65.500000 1 1 1 NCBI RefSeq GCF_000236665.1-RS_2026_03_27 2026-03-27 3588 3509 66 22535943 GCF_000236685.1 PRJNA224116 SAMN02261363 na reference genome 158190 1131707 Sphaerochaeta pleomorpha str. Grapes strain=Grapes na latest Complete Genome Major Full 2011-12-05 ASM23668v1 JGI GCA_000236685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/685/GCF_000236685.1_ASM23668v1/ na assembly from type material na haploid bacteria 3590853 3590853 46.000000 1 1 1 NCBI RefSeq GCF_000236685.1-RS_2026_05_01 2026-05-01 3283 3204 68 na GCF_000236705.1 PRJNA224116 SAMN02261417 na reference genome 926562 253245 Owenweeksia hongkongensis DSM 17368 strain=DSM 17368 na latest Complete Genome Major Full 2011-12-05 ASM23670v1 JGI GCA_000236705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/705/GCF_000236705.1_ASM23670v1/ na assembly from type material na haploid bacteria 4000057 4000057 40.000000 1 1 1 NCBI RefSeq GCF_000236705.1-RS_2025_12_10 2025-12-10 3531 3473 46 23450211 GCF_000236785.1 PRJNA224116 SAMN02469904 AGUF00000000.1 reference genome 477184 1147684 Achromobacter arsenitoxydans SY8 strain=SY8 na latest Contig Major Full 2011-12-05 ASM23678v2 Huazhong Agricultural University GCA_000236785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/785/GCF_000236785.1_ASM23678v2/ na na na haploid bacteria 6156664 6156664 66.000000 0 105 105 NCBI RefSeq GCF_000236785.1-RS_2026_03_27 2026-03-27 5764 5652 60 22328747 GCF_000236805.1 PRJNA224116 SAMN02470185 AGFX00000000.1 reference genome 1087481 59893 Paenibacillus peoriae KCTC 3763 strain=KCTC 3763 na latest Scaffold Major Full 2011-12-05 PPe03 Korea Research Institute of Bioscience & Biotechnology GCA_000236805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/805/GCF_000236805.1_PPe03/ na assembly from type material na haploid bacteria 5771987 5771987 46.500000 1 49 49 NCBI RefSeq GCF_000236805.1-RS_2026_04_04 2026-04-04 5210 5025 97 na GCF_000236825.1 PRJNA224116 SAMN02471562 AHBD00000000.1 na 1112217 47885 Pseudomonas psychrotolerans L19 strain=L19 na latest Contig Major Full 2011-12-05 ASM23682v2 Soil, Water and Environmental Science, University of Arizona GCA_000236825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/825/GCF_000236825.1_ASM23682v2/ na na na haploid bacteria 5100236 5100236 65.500000 0 53 53 NCBI RefSeq GCF_000236825.1-RS_2025_07_21 2025-07-21 4851 4675 68 22374955 GCF_000236865.1 PRJNA224116 SAMEA2272806 CAEM00000000.1 reference genome 1034345 1473216 Senegalimassilia anaerobia JC110 strain=type strain: JC110 na latest Scaffold Major Full 2011-11-30 ASM23686v1 laboratoire URMITE CNRS 6236 GCA_000236865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/865/GCF_000236865.1_ASM23686v1/ na assembly from type material na haploid bacteria 2398022 2354438 62.000000 0 30 84 NCBI RefSeq GCF_000236865.1-RS_2026_03_20 2026-03-20 2001 1923 62 na GCF_000236905.1 PRJNA79335 SAMEA2272094 na reference genome 1071381 113608 Tetrapisispora phaffii CBS 4417 strain=type strain:CBS 4417 na latest Chromosome Major Full 2011-11-17 ASM23690v1 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000236905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/905/GCF_000236905.1_ASM23690v1/ na assembly from type material na haploid fungi 12115070 12099635 33.500000 16 17 105 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5462 5252 210 22123960 GCF_000236925.1 PRJNA224116 SAMEA2272597 na reference genome 985002 985002 Staphylococcus argenteus strain=MSHR1132 na latest Complete Genome Major Full 2011-11-10 ASM23692v1 The Wellcome Trust Sanger Institute GCA_000236925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/925/GCF_000236925.1_ASM23692v1/ na assembly from type material na haploid bacteria 2787638 2787638 32.500000 2 2 2 NCBI RefSeq GCF_000236925.1-RS_2025_12_11 2025-12-11 2692 2530 77 21813488 GCF_000236945.1 PRJNA224116 SAMN02470710 AGVV00000000.1 na 1107881 382 Sinorhizobium meliloti CCNWSX0020 strain=CCNWSX0020 na latest Contig Major Full 2011-12-07 ASM23694v2 Northwest A&F University GCA_000236945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/945/GCF_000236945.1_ASM23694v2/ na na na haploid bacteria 7001588 7001588 62.000000 0 233 233 NCBI RefSeq GCF_000236945.1-RS_2026_04_23 2026-04-23 6840 6423 59 22328762 GCF_000236965.1 PRJNA224116 SAMN02469321 AHBW00000000.1 na 1114960 103816 Rhodococcus pyridinivorans AK37 strain=AK37 na latest Contig Major Full 2011-12-08 ASM23696v2 BAYGEN GCA_000236965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/965/GCF_000236965.1_ASM23696v2/ na na na haploid bacteria 5244611 5244611 68.000000 0 98 98 NCBI RefSeq GCF_000236965.1-RS_2026_05_19 2026-05-19 5027 4715 58 na GCF_000236985.1 PRJNA224116 SAMN02469318 AHBX00000000.1 na 1114959 40988 Saccharomonospora azurea SZMC 14600 strain=SZMC 14600 na latest Contig Major Full 2011-12-08 ASM23698v2 BAYGEN GCA_000236985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/236/985/GCF_000236985.1_ASM23698v2/ na na na haploid bacteria 4973727 4973727 70.500000 0 216 216 NCBI RefSeq GCF_000236985.1-RS_2025_07_30 2025-07-30 4729 4452 58 na GCF_000237005.1 PRJNA224116 SAMEA2272710 CAGD00000000.1 na 1118154 1465 Brevibacillus laterosporus GI-9 strain=GI-9 na latest Contig Major Full 2011-12-08 ASM23700v2 Institute of Microbial Technology (CSIR), Sector 39A, Chandigarh-160036, India GCA_000237005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/005/GCF_000237005.1_ASM23700v2/ na na na haploid bacteria 5184696 5184696 41.000000 0 61 61 NCBI RefSeq GCF_000237005.1-RS_2025_05_24 2025-05-24 4707 4493 110 22328768 GCF_000237045.1 PRJNA224116 SAMN02470965 AHAY00000000.1 na 1117110 587753 Pseudomonas chlororaphis subsp. chlororaphis GP72 strain=GP72 na latest Contig Major Full 2011-12-09 ASM23704v2 Shanghai Jiao Tong University GCA_000237045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/045/GCF_000237045.1_ASM23704v2/ na na na haploid bacteria 6629881 6629881 63.000000 0 347 347 NCBI RefSeq GCF_000237045.1-RS_2026_02_06 2026-02-06 6221 6032 65 22328763 GCF_000237065.1 PRJNA224116 SAMN02604099 na na 1114970 1114970 Pseudomonas ogarae strain=F113 na latest Complete Genome Major Full 2011-12-09 ASM23706v1 Universidad Autónoma de Madrid GCA_000237065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/065/GCF_000237065.1_ASM23706v1/ na assembly from type material na haploid bacteria 6845832 6845832 61.000000 1 1 1 NCBI RefSeq GCF_000237065.1-RS_2025_09_05 2025-09-05 6149 5969 85 22328765 GCF_000237085.1 PRJNA224116 SAMN02261428 na reference genome 720554 288965 Acetivibrio clariflavus DSM 19732 strain=DSM 19732 na latest Complete Genome Major Full 2011-12-12 ASM23708v1 JGI GCA_000237085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/085/GCF_000237085.1_ASM23708v1/ na assembly from type material na haploid bacteria 4897678 4897678 35.500000 1 1 1 NCBI RefSeq GCF_000237085.1-RS_2026_03_30 2026-03-30 4230 4016 83 22675603 GCF_000237125.2 PRJNA224116 SAMN02603643 na na 1118959 1280 Staphylococcus aureus subsp. aureus M013 strain=M013 na latest Complete Genome Major Full 2019-05-15 ASM23712v3 National Health Research Institutes GCA_000237125.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/125/GCF_000237125.2_ASM23712v3/ na na na haploid bacteria 2816697 2816697 33.000000 2 2 2 NCBI RefSeq GCF_000237125.2-RS_2025_05_19 2025-05-19 2775 2608 82 22328755 GCF_000237145.1 PRJNA224116 SAMN02603081 na na 134676 134676 Actinoplanes sp. SE50/110 strain=SE50/110 na latest Complete Genome Major Full 2011-12-12 ASM23714v1 Center For Biotechnology, Bielefeld University GCA_000237145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/145/GCF_000237145.1_ASM23714v1/ na na na haploid bacteria 9239851 9239851 71.500000 1 1 1 NCBI RefSeq GCF_000237145.1-RS_2024_08_13 2024-08-13 8435 8202 124 na GCF_000237205.1 PRJNA224116 SAMEA2272380 na reference genome 331113 83561 Simkania negevensis Z strain=Z na latest Complete Genome Major Full 2011-06-21 ASM23720v1 University of Vienna, Dept. of Microbial Ecology GCA_000237205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/205/GCF_000237205.1_ASM23720v1/ na assembly from type material na haploid bacteria 2628375 2628375 41.500000 2 2 2 NCBI RefSeq GCF_000237205.1-RS_2025_12_11 2025-12-11 2391 2329 41 21690563 GCF_000237265.1 PRJNA224116 SAMEA2272771 na na 985006 1280 Staphylococcus aureus subsp. aureus LGA251 strain=LGA251 na latest Complete Genome Major Full 2011-08-23 ASM23726v1 The Wellcome Trust Sanger Institute GCA_000237265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/265/GCF_000237265.1_ASM23726v1/ na na na haploid bacteria 2753827 2753827 33.000000 2 2 2 NCBI RefSeq GCF_000237265.1-RS_2025_03_15 2025-03-15 2691 2533 82 21641281 GCF_000237285.1 PRJNA224116 SAMEA2272649 na na 1002804 56877 Helicobacter bizzozeronii CIII-1 strain=CIII-1 na latest Chromosome Major Full 2011-06-08 ASM23728v1 University of Helsinki, Faculty of Veterinary Medicine GCA_000237285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/285/GCF_000237285.1_ASM23728v1/ na na na haploid bacteria 1807534 1798412 46.000000 2 2 5 NCBI RefSeq GCF_000237285.1-RS_2025_07_06 2025-07-06 1855 1703 46 21705603 GCF_000237305.1 PRJNA224116 SAMEA3138404 na reference genome 1003195 29303 Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 strain=NRRL 8057 na latest Complete Genome Major Full 2011-06-24 ASM23730v1 CEA/Genoscope GCA_000237305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/305/GCF_000237305.1_ASM23730v1/ na assembly from type material na haploid bacteria 8092553 8092553 73.000000 2 2 2 NCBI RefSeq GCF_000237305.1-RS_2025_12_09 2025-12-09 7235 7007 86 21868806 GCF_000237325.1 PRJNA224116 SAMEA2272483 na na 1052684 1406 Paenibacillus polymyxa M1 strain=M1 na latest Complete Genome Major Full 2011-08-05 ASM23732v1 Center for Biotechnology, Bielefeld University GCA_000237325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/325/GCF_000237325.1_ASM23732v1/ na na na haploid bacteria 6231122 6231122 45.000000 2 2 2 NCBI RefSeq GCF_000237325.1-RS_2025_03_15 2025-03-15 5712 5458 156 21952539 GCF_000237345.1 PRJNA79343 SAMEA2271985 na reference genome 27288 27288 Naumovozyma castellii strain=type strain:CBS 4309 na latest Chromosome Major Full 2011-08-01 ASM23734v1 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin GCA_000237345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/345/GCF_000237345.1_ASM23734v1/ na assembly from type material na haploid fungi 11219539 11219419 37.000000 10 10 17 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin 2025-07-15 5867 5589 278 22123960 GCF_000237365.1 PRJNA224116 SAMEA2272384 na na 1064539 1064539 Azospirillum baldaniorum strain=Sp245 na latest Chromosome Major Full 2011-11-11 ASM23736v1 Georgia Institute of Technology GCA_000237365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/365/GCF_000237365.1_ASM23736v1/ na assembly from type material na haploid bacteria 7530241 7524241 68.500000 7 7 67 NCBI RefSeq GCF_000237365.1-RS_2026_03_31 2026-03-31 7089 6655 98 22216014 GCF_000237405.1 PRJNA224116 SAMN00765516 AHFX00000000.1 na 1124474 666 Vibrio cholerae O1 str. 2009V-1046 strain=2009V-1046 na latest Contig Major Full 2011-12-12 ASM23740v2 Public Health Agency of Canada GCA_000237405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/405/GCF_000237405.1_ASM23740v2/ na na na haploid bacteria 4014220 4014220 47.500000 0 72 72 NCBI RefSeq GCF_000237405.1-RS_2026_06_02 2026-06-02 3655 3530 67 22099115 GCF_000237425.1 PRJNA224116 SAMN00765527 AHFY00000000.1 na 1124469 666 Vibrio cholerae O1 str. 2009V-1085 strain=2009V-1085 na latest Contig Major Full 2011-12-12 ASM23742v2 Public Health Agency of Canada GCA_000237425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/425/GCF_000237425.1_ASM23742v2/ na na na haploid bacteria 4014382 4014382 47.500000 0 73 73 NCBI RefSeq GCF_000237425.1-RS_2026_05_02 2026-05-02 3660 3535 74 22099115 GCF_000237445.1 PRJNA224116 SAMN00765530 AHFZ00000000.1 na 1124470 666 Vibrio cholerae O1 str. 2009V-1096 strain=2009V-1096 na latest Contig Major Full 2011-12-12 ASM23744v2 Public Health Agency of Canada GCA_000237445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/445/GCF_000237445.1_ASM23744v2/ na na na haploid bacteria 4016479 4016479 47.500000 0 73 73 NCBI RefSeq GCF_000237445.1-RS_2026_05_02 2026-05-02 3671 3543 76 22099115 GCF_000237465.1 PRJNA224116 SAMN00765531 AHGA00000000.1 na 1124475 666 Vibrio cholerae O1 str. 2009V-1116 strain=2009V-1116 na latest Contig Major Full 2011-12-12 ASM23746v2 Public Health Agency of Canada GCA_000237465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/465/GCF_000237465.1_ASM23746v2/ na na na haploid bacteria 4013388 4013388 47.500000 0 77 77 NCBI RefSeq GCF_000237465.1-RS_2026_04_29 2026-04-29 3664 3544 72 22099115 GCF_000237485.1 PRJNA224116 SAMN00765532 AHGB00000000.1 na 1124471 666 Vibrio cholerae O1 str. 2009V-1131 strain=2009V-1131 na latest Contig Major Full 2011-12-12 ASM23748v2 Public Health Agency of Canada GCA_000237485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/485/GCF_000237485.1_ASM23748v2/ na na na haploid bacteria 4010678 4010678 47.500000 0 94 94 NCBI RefSeq GCF_000237485.1-RS_2025_04_18 2025-04-18 3673 3515 67 22099115 GCF_000237505.1 PRJNA224116 SAMN00765533 AHGC00000000.1 na 1124468 666 Vibrio cholerae O1 str. 2010EL-1749 strain=2010EL-1749 na latest Contig Major Full 2011-12-12 ASM23750v2 Public Health Agency of Canada GCA_000237505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/505/GCF_000237505.1_ASM23750v2/ na na na haploid bacteria 4009493 4009493 47.500000 0 159 159 NCBI RefSeq GCF_000237505.1-RS_2026_07_03 2026-07-03 3704 3553 67 22099115 GCF_000237525.1 PRJNA224116 SAMN00765534 AHGD00000000.1 na 1124480 666 Vibrio cholerae O1 str. 2010EL-1961 strain=2010EL-1961 na latest Contig Major Full 2011-12-12 ASM23752v2 Public Health Agency of Canada GCA_000237525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/525/GCF_000237525.1_ASM23752v2/ na na na haploid bacteria 4004160 4004160 47.500000 0 96 96 NCBI RefSeq GCF_000237525.1-RS_2026_05_29 2026-05-29 3666 3534 77 22099115 GCF_000237545.1 PRJNA224116 SAMN00765535 AHGE00000000.1 na 1124486 666 Vibrio cholerae O1 str. 2010EL-2010H strain=2010EL-2010H na latest Contig Major Full 2011-12-12 ASM23754v2 Public Health Agency of Canada GCA_000237545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/545/GCF_000237545.1_ASM23754v2/ na na na haploid bacteria 4018270 4018270 47.500000 0 75 75 NCBI RefSeq GCF_000237545.1-RS_2026_04_26 2026-04-26 3676 3553 79 22099115 GCF_000237565.1 PRJNA224116 SAMN00765536 AHGF00000000.1 na 1124484 666 Vibrio cholerae O1 str. 2010EL-2010N strain=2010EL-2010N na latest Contig Major Full 2011-12-12 ASM23756v2 Public Health Agency of Canada GCA_000237565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/565/GCF_000237565.1_ASM23756v2/ na na na haploid bacteria 4019650 4019650 47.500000 0 77 77 NCBI RefSeq GCF_000237565.1-RS_2026_06_04 2026-06-04 3677 3540 79 22099115 GCF_000237585.1 PRJNA224116 SAMN00765517 AHGG00000000.1 na 1124476 666 Vibrio cholerae O1 str. 2010V-1014 strain=2010V-1014 na latest Contig Major Full 2011-12-12 ASM23758v2 Public Health Agency of Canada GCA_000237585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/585/GCF_000237585.1_ASM23758v2/ na na na haploid bacteria 4015902 4015902 47.500000 0 75 75 NCBI RefSeq GCF_000237585.1-RS_2026_04_30 2026-04-30 3661 3541 71 22099115 GCF_000237605.1 PRJNA224116 SAMN00765518 AHGH00000000.1 na 1124481 666 Vibrio cholerae O1 str. 2011EL-1089 strain=2011EL-1089 na latest Contig Major Full 2011-12-12 ASM23760v2 Public Health Agency of Canada GCA_000237605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/605/GCF_000237605.1_ASM23760v2/ na na na haploid bacteria 4013698 4013698 47.500000 0 87 87 NCBI RefSeq GCF_000237605.1-RS_2026_05_03 2026-05-03 3659 3538 69 22099115 GCF_000237645.1 PRJNA224116 SAMN00765520 AHGJ00000000.1 na 1124483 666 Vibrio cholerae O1 str. 2011EL-1137 strain=2011EL-1137 na latest Contig Major Full 2011-12-12 ASM23764v2 Public Health Agency of Canada GCA_000237645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/645/GCF_000237645.1_ASM23764v2/ na na na haploid bacteria 4018022 4018022 47.500000 0 72 72 NCBI RefSeq GCF_000237645.1-RS_2026_04_26 2026-04-26 3672 3553 76 22099115 GCF_000237665.1 PRJNA224116 SAMN00765521 AHGK00000000.1 na 1124485 666 Vibrio cholerae O1 str. 2011V-1021 strain=2011V-1021 na latest Contig Major Full 2011-12-12 ASM23766v2 Public Health Agency of Canada GCA_000237665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/665/GCF_000237665.1_ASM23766v2/ na na na haploid bacteria 4011850 4011850 47.500000 0 95 95 NCBI RefSeq GCF_000237665.1-RS_2026_05_01 2026-05-01 3669 3546 71 22099115 GCF_000237685.1 PRJNA224116 SAMN00765522 AHGL00000000.1 na 1124472 666 Vibrio cholerae O1 str. 3500-05 strain=3500-05 na latest Contig Major Full 2011-12-12 ASM23768v2 Public Health Agency of Canada GCA_000237685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/685/GCF_000237685.1_ASM23768v2/ na na na haploid bacteria 4012828 4012828 47.500000 0 79 79 NCBI RefSeq GCF_000237685.1-RS_2026_04_27 2026-04-27 3653 3541 65 22099115 GCF_000237705.1 PRJNA224116 SAMN00765523 AHGM00000000.1 na 1124473 666 Vibrio cholerae O1 str. 3546-06 strain=3546-06 na latest Contig Major Full 2011-12-12 ASM23770v2 Public Health Agency of Canada GCA_000237705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/705/GCF_000237705.1_ASM23770v2/ na na na haploid bacteria 4012129 4012129 47.500000 0 85 85 NCBI RefSeq GCF_000237705.1-RS_2026_05_29 2026-05-29 3650 3536 60 22099115 GCF_000237725.1 PRJNA224116 SAMN00765524 AHGN00000000.1 na 1124487 666 Vibrio cholerae O1 str. 3554-08 strain=3554-08 na latest Contig Major Full 2011-12-12 ASM23772v2 Public Health Agency of Canada GCA_000237725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/725/GCF_000237725.1_ASM23772v2/ na na na haploid bacteria 4019938 4019938 47.500000 0 80 80 NCBI RefSeq GCF_000237725.1-RS_2026_05_01 2026-05-01 3687 3556 81 22099115 GCF_000237765.1 PRJNA224116 SAMN00765526 AHGP00000000.1 na 1124477 666 Vibrio cholerae O1 str. 3582-05 strain=3582-05 na latest Contig Major Full 2011-12-12 ASM23776v2 Public Health Agency of Canada GCA_000237765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/765/GCF_000237765.1_ASM23776v2/ na na na haploid bacteria 3975631 3975631 47.500000 0 67 67 NCBI RefSeq GCF_000237765.1-RS_2026_04_29 2026-04-29 3624 3506 70 22099115 GCF_000237785.1 PRJNA224116 SAMN00765528 AHGQ00000000.1 na 1124478 666 Vibrio cholerae O1 str. C6706 strain=C6706 na latest Contig Major Full 2011-12-12 ASM23778v2 Public Health Agency of Canada GCA_000237785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/785/GCF_000237785.1_ASM23778v2/ na na na haploid bacteria 4001202 4001202 47.500000 0 80 80 NCBI RefSeq GCF_000237785.1-RS_2026_05_30 2026-05-30 3657 3536 65 22099115 GCF_000237805.1 PRJNA224116 SAMN02261412 AGRU00000000.1 na 885272 428712 Jonquetella anthropi DSM 22815 strain=DSM 22815 na latest Chromosome Major Full 2011-12-19 ASM23780v1 JGI GCA_000237805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/805/GCF_000237805.1_ASM23780v1/ na assembly from type material na haploid bacteria 1675934 1675634 59.500000 1 1 4 NCBI RefSeq GCF_000237805.1-RS_2026_01_15 2026-01-15 1611 1535 57 na GCF_000237825.1 PRJNA224116 SAMN02261421 AHGV00000000.1 reference genome 926567 108007 Thermanaerovibrio velox DSM 12556 strain=DSM 12556 na latest Chromosome Major Full 2011-12-19 ASM23782v1 JGI GCA_000237825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/825/GCF_000237825.1_ASM23782v1/ na assembly from type material na haploid bacteria 1880838 1880738 59.000000 1 1 2 NCBI RefSeq GCF_000237825.1-RS_2026_05_01 2026-05-01 1865 1772 60 na GCF_000237845.1 PRJNA224116 SAMN02603145 na reference genome 941638 35794 Rickettsia slovaca 13-B strain=13-B na latest Complete Genome Major Full 2011-12-13 ASM23784v1 CNRS GCA_000237845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/845/GCF_000237845.1_ASM23784v1/ na assembly from type material na haploid bacteria 1275089 1275089 32.500000 1 1 1 NCBI RefSeq GCF_000237845.1-RS_2026_01_08 2026-01-08 1476 1337 40 22374949 GCF_000237865.1 PRJNA224116 SAMEA2272799 na na 768065 293091 Haloquadratum walsbyi C23 strain=DSM 16854 = C23 na latest Complete Genome Major Full 2011-05-31 ASM23786v1 Max-Planck-Institute of Biochemistry GCA_000237865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/865/GCF_000237865.1_ASM23786v1/ na assembly from type material na haploid archaea 3260476 3260476 47.500000 4 4 4 NCBI RefSeq GCF_000237865.1-RS_2025_12_02 2025-12-02 3033 2800 53 21701686 GCF_000237885.1 PRJNA224116 SAMN02471579 AGSL00000000.1 na 32042 316 Stutzerimonas stutzeri ATCC 14405 = CCUG 16156 strain=CCUG 16156 na latest Contig Major Full 2011-12-13 PseStu_1.0 University of Balearic Islands GCA_000237885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/885/GCF_000237885.1_PseStu_1.0/ na na na haploid bacteria 4525589 4525589 61.500000 0 130 130 NCBI RefSeq GCF_000237885.1-RS_2026_03_20 2026-03-20 4258 4109 58 22328767 GCF_000237995.1 PRJNA224116 SAMN02604240 na na 701521 187452 Pediococcus claussenii ATCC BAA-344 strain=ATCC BAA-344 na latest Complete Genome Major Full 2012-03-15 ASM23799v2 University of Saskatchewan GCA_000237995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/237/995/GCF_000237995.1_ASM23799v2/ na assembly from type material na haploid bacteria 1978793 1978793 37.000000 9 9 9 NCBI RefSeq GCF_000237995.1-RS_2026_01_15 2026-01-15 1963 1857 73 22328764 GCF_000238035.1 PRJNA224116 SAMN02299420 AFZX00000000.1 na 537010 49338 Desulfitobacterium hafniense DP7 strain=DP7 na latest Scaffold Major Full 2011-12-15 ASM23803v1 Washington University Genome Sequencing Center GCA_000238035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/035/GCF_000238035.1_ASM23803v1/ na na na haploid bacteria 5203418 5194305 47.500000 0 63 151 NCBI RefSeq GCF_000238035.1-RS_2026_05_13 2026-05-13 4986 4856 54 na GCF_000238055.2 PRJNA224116 SAMN02463872 AFZC00000000.2 reference genome 796943 1501329 Oribacterium parvum ACB1 strain=ACB1 na latest Scaffold Major Full 2013-06-18 Oribacterium_sp_ACB1_V2 Broad Institute GCA_000238055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/055/GCF_000238055.2_Oribacterium_sp_ACB1_V2/ na assembly from type material na haploid bacteria 2470863 2470590 42.000000 0 2 4 NCBI RefSeq GCF_000238055.2-RS_2025_12_16 2025-12-16 2203 2109 67 na GCF_000238075.1 PRJNA224116 SAMN02463873 AFZD00000000.1 reference genome 796944 1501332 Oribacterium asaccharolyticum ACB7 strain=ACB7 na latest Scaffold Major Full 2011-12-15 Oribacterium_sp_ACB7_V1 Broad Institute GCA_000238075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/075/GCF_000238075.1_Oribacterium_sp_ACB7_V1/ na assembly from type material na haploid bacteria 2520584 2515191 43.500000 0 9 21 NCBI RefSeq GCF_000238075.1-RS_2025_12_13 2025-12-13 2285 2181 64 na GCF_000238095.2 PRJNA224116 SAMN02463878 AFZF00000000.2 na 796937 796937 Peptoanaerobacter stomatis strain=CM2 na latest Scaffold Major Full 2012-09-18 Euba_bact_CM2_V2 Broad Institute GCA_000238095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/095/GCF_000238095.2_Euba_bact_CM2_V2/ na na na haploid bacteria 2325163 2312592 30.000000 0 3 19 NCBI RefSeq GCF_000238095.2-RS_2026_02_27 2026-02-27 2042 1960 62 na GCF_000238115.1 PRJNA224116 SAMN02463877 AFZE00000000.1 reference genome 796937 796937 Peptoanaerobacter stomatis strain=ACC19a na latest Scaffold Major Full 2011-12-15 Euba_bact_ACC19a_V1 Broad Institute GCA_000238115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/115/GCF_000238115.1_Euba_bact_ACC19a_V1/ na assembly from type material na haploid bacteria 2543633 2541543 30.500000 0 50 59 NCBI RefSeq GCF_000238115.1-RS_2025_12_13 2025-12-13 2325 2211 60 na GCF_000238135.1 PRJNA224116 SAMN02463879 AFZG00000000.1 na 796937 796937 Peptoanaerobacter stomatis strain=CM5 na latest Scaffold Major Full 2011-12-15 Eubact_bact_CM5_V1 Broad Institute GCA_000238135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/135/GCF_000238135.1_Eubact_bact_CM5_V1/ na na na haploid bacteria 2596720 2594242 30.500000 0 92 106 NCBI RefSeq GCF_000238135.1-RS_2026_02_27 2026-02-27 2410 2285 63 na GCF_000238175.1 PRJNA224116 SAMN02603577 na na 1104320 235 Brucella abortus A13334 strain=A13334 na latest Complete Genome Major Full 2011-12-15 ASM23817v1 Macrogen GCA_000238175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/175/GCF_000238175.1_ASM23817v1/ na na na haploid bacteria 3286032 3286032 57.000000 2 2 2 NCBI RefSeq GCF_000238175.1-RS_2026_04_23 2026-04-23 3227 2981 68 22965076 GCF_000238195.1 PRJNA224116 SAMN02603578 na na 1104321 36855 Brucella canis HSK A52141 strain=A52141 na latest Complete Genome Major Full 2011-12-15 ASM23819v1 Macrogen GCA_000238195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/195/GCF_000238195.1_ASM23819v1/ na na na haploid bacteria 3277512 3277512 57.000000 2 2 2 NCBI RefSeq GCF_000238195.1-RS_2025_08_08 2025-08-08 3191 2980 68 22933762 GCF_000238215.1 PRJNA224116 SAMN02604009 na reference genome 203275 28112 Tannerella forsythia 92A2 strain=92A2 na latest Complete Genome Major Full 2011-12-15 ASM23821v1 TIGR GCA_000238215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/215/GCF_000238215.1_ASM23821v1/ na na na haploid bacteria 3405521 3405521 47.000000 1 1 1 NCBI RefSeq GCF_000238215.1-RS_2025_12_11 2025-12-11 2846 2700 54 na GCF_000238255.3 PRJNA224116 SAMN02470926 na reference genome 1117319 298657 Pseudoalteromonas spongiae UST010723-006 strain=UST010723-006 na latest Complete Genome Major Full 2017-09-18 ASM23825v4 Shandong University GCA_000238255.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/255/GCF_000238255.3_ASM23825v4/ na assembly from type material na haploid bacteria 4752413 4752413 41.000000 2 2 2 NCBI RefSeq GCF_000238255.3-RS_2026_03_30 2026-03-30 4313 4182 119 22535931 GCF_000238275.3 PRJNA224116 SAMN03380231 AHCF00000000.3 reference genome 43660 43660 Pseudoalteromonas undina strain=DSM 6065 na latest Chromosome Major Full 2020-10-02 Pund_v2.0 Shandong University GCA_000238275.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/275/GCF_000238275.3_Pund_v2.0/ na assembly from type material na haploid bacteria 4027610 4027610 40.000000 1 4 4 NCBI RefSeq GCF_000238275.3-RS_2025_03_28 2025-03-28 3678 3535 121 22535931 GCF_000238295.3 PRJNA224116 SAMN03380246 AHCD00000000.3 reference genome 43658 43658 Pseudoalteromonas rubra strain=DSM 6842 na latest Chromosome Major Full 2020-10-02 ASM23829v4 Shandong University GCA_000238295.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/295/GCF_000238295.3_ASM23829v4/ na assembly from type material na haploid bacteria 6143755 6143755 48.000000 1 44 44 NCBI RefSeq GCF_000238295.3-RS_2026_04_06 2026-04-06 5290 4968 243 22374963 GCF_000238315.3 PRJNA224116 SAMN02470929 na reference genome 43662 43662 Pseudoalteromonas piscicida strain=JCM 20779 na latest Chromosome Major Full 2017-09-18 ASM23831v4 Shandong University GCA_000238315.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/315/GCF_000238315.3_ASM23831v4/ na assembly from type material na haploid bacteria 5488279 5488179 43.500000 2 2 2 NCBI RefSeq GCF_000238315.3-RS_2026_03_31 2026-03-31 4937 4623 220 na GCF_000238335.3 PRJNA224116 SAMN03380241 AHCB00000000.3 na 267375 267375 Pseudoalteromonas marina strain=DSM 17587 na latest Chromosome Major Full 2020-10-02 ASM23833v4 Shandong University GCA_000238335.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/335/GCF_000238335.3_ASM23833v4/ na assembly from type material na haploid bacteria 4190548 4190548 39.500000 1 12 12 NCBI RefSeq GCF_000238335.3-RS_2026_04_06 2026-04-06 3828 3690 119 22535931 GCF_000238355.1 PRJNA224116 SAMN02470924 AHCA00000000.1 na 1117315 228 Pseudoalteromonas haloplanktis ATCC 14393 strain=ATCC 14393 na latest Contig Major Full 2011-12-15 Phal_1.0 Shandong University GCA_000238355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/355/GCF_000238355.1_Phal_1.0/ na na na haploid bacteria 5021465 5021465 41.000000 0 56 56 NCBI RefSeq GCF_000238355.1-RS_2025_09_18 2025-09-18 4437 4277 113 22535931 GCF_000238375.3 PRJNA224116 SAMN03380236 AHBZ00000000.3 reference genome 43655 43655 Pseudoalteromonas citrea strain=DSM 8771 na latest Contig Major Full 2020-10-02 ASM23837v4 Shandong University GCA_000238375.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/375/GCF_000238375.3_ASM23837v4/ na assembly from type material na haploid bacteria 5434598 5434598 41.000000 0 27 27 NCBI RefSeq GCF_000238375.3-RS_2026_03_23 2026-03-23 4629 4454 115 22535931 GCF_000238395.3 PRJNA224116 SAMN02470925 na reference genome 1117313 394751 Pseudoalteromonas arctica A 37-1-2 strain=A 37-1-2 na latest Complete Genome Major Full 2017-09-18 ASM23839v4 Shandong University GCA_000238395.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/395/GCF_000238395.3_ASM23839v4/ na assembly from type material na haploid bacteria 4721971 4721971 39.000000 3 3 3 NCBI RefSeq GCF_000238395.3-RS_2025_09_03 2025-09-03 4273 4061 135 22535931 GCF_000238435.1 PRJNA224116 SAMN00754300 AESY00000000.1 na 766761 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 4441 H strain=4441 H na latest Contig Major Full 2011-12-16 ASM23843v2 FDA GCA_000238435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/435/GCF_000238435.1_ASM23843v2/ na na na haploid bacteria 4625661 4625661 52.000000 0 73 73 NCBI RefSeq GCF_000238435.1-RS_2025_02_04 2025-02-04 4531 4288 71 22260654 GCF_000238455.2 PRJNA224116 SAMN00754299 na na 763921 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 42N strain=42N na latest Complete Genome Major Full 2019-03-18 ASM23845v3 FDA GCA_000238455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/455/GCF_000238455.2_ASM23845v3/ na na na haploid bacteria 4768632 4768632 52.500000 1 1 1 NCBI RefSeq GCF_000238455.2-RS_2025_05_20 2025-05-20 4689 4407 128 22260654 GCF_000238475.1 PRJNA224116 SAMN00754298 AESW00000000.1 na 763920 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 29N strain=29N na latest Contig Major Full 2011-12-16 ASM23847v2 FDA GCA_000238475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/475/GCF_000238475.1_ASM23847v2/ na na na haploid bacteria 4576100 4576100 52.500000 0 78 78 NCBI RefSeq GCF_000238475.1-RS_2025_02_04 2025-02-04 4480 4216 72 22260654 GCF_000238495.1 PRJNA224116 SAMN00754297 AESU00000000.1 na 749947 28901 Salmonella enterica subsp. enterica serovar Montevideo str. SARB30 strain=SGSC 2487 na latest Contig Major Full 2011-12-16 ASM23849v2 FDA GCA_000238495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/495/GCF_000238495.1_ASM23849v2/ na na na haploid bacteria 4744762 4744762 52.000000 0 61 61 NCBI RefSeq GCF_000238495.1-RS_2025_02_11 2025-02-11 4665 4423 73 22260654 GCF_000238515.1 PRJNA224116 SAMN00754296 AEST00000000.1 na 749948 28901 Salmonella enterica subsp. enterica serovar Montevideo str. LQC 10 strain=LQC 10 na latest Contig Major Full 2011-12-16 ASM23851v2 FDA GCA_000238515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/515/GCF_000238515.1_ASM23851v2/ na na na haploid bacteria 4607060 4607060 52.500000 0 53 53 NCBI RefSeq GCF_000238515.1-RS_2025_02_04 2025-02-04 4496 4252 77 22260654 GCF_000238535.1 PRJNA224116 SAMN00754295 AESS00000000.1 na 749953 28901 Salmonella enterica subsp. enterica serovar Montevideo str. ATCC BAA710 strain=ATCC BAA710 na latest Contig Major Full 2011-12-16 ASM23853v2 FDA GCA_000238535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/535/GCF_000238535.1_ASM23853v2/ na na na haploid bacteria 4419392 4419392 52.500000 0 193 193 NCBI RefSeq GCF_000238535.1-RS_2025_02_04 2025-02-04 4412 4007 120 22260654 GCF_000238555.1 PRJNA224116 SAMN00754243 AESR00000000.1 na 749952 28901 Salmonella enterica subsp. enterica serovar Montevideo str. SARB31 strain=SARB31 na latest Contig Major Full 2011-12-16 ASM23855v2 FDA GCA_000238555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/555/GCF_000238555.1_ASM23855v2/ na na na haploid bacteria 4648271 4648271 52.500000 0 55 55 NCBI RefSeq GCF_000238555.1-RS_2025_02_04 2025-02-04 4530 4269 81 22260654 GCF_000238575.1 PRJNA224116 SAMN02471708 AGNS00000000.1 na 1087479 2751 Carnobacterium maltaromaticum ATCC 35586 strain=ATCC 35586 na latest Contig Major Full 2011-12-15 ASM23857v2 University of Copenhagen GCA_000238575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/575/GCF_000238575.1_ASM23857v2/ na assembly from heterotypic synonym type material na haploid bacteria 3542354 3542354 34.500000 0 74 74 NCBI RefSeq GCF_000238575.1-RS_2026_04_07 2026-04-07 3444 3328 75 21704418 GCF_000238595.1 PRJNA224116 SAMN02471019 AGTS00000000.1 na 512030 512030 Acidovorax sp. NO-1 strain=NO-1 na latest Contig Major Full 2011-12-15 ASM23859v2 Huazhong Agricultural University GCA_000238595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/595/GCF_000238595.1_ASM23859v2/ na na na haploid bacteria 5011736 5011736 64.500000 0 161 161 NCBI RefSeq GCF_000238595.1-RS_2024_08_13 2024-08-13 4768 4559 52 22374962 GCF_000238655.1 PRJNA224116 SAMN02463788 ACWE00000000.1 na 665957 665957 Bacillus sp. 7_6_55CFAA_CT2 strain=7_6_55CFAA_CT2 na latest Scaffold Major Full 2011-12-20 Bacillus_sp_7_6_55CFAA_CT2_V1 Broad Institute GCA_000238655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/655/GCF_000238655.1_Bacillus_sp_7_6_55CFAA_CT2_V1/ na na na haploid bacteria 5747288 5709356 35.000000 0 30 131 NCBI RefSeq GCF_000238655.1-RS_2024_05_27 2024-05-27 5883 5369 157 na GCF_000238675.1 PRJNA224116 SAMN02463789 ACWF00000000.1 na 665952 1479 Bacillus smithii 7_3_47FAA strain=7_3_47FAA na latest Scaffold Major Full 2011-12-20 Baci_smit_7_3_47FAA_V1 Broad Institute GCA_000238675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/675/GCF_000238675.1_Baci_smit_7_3_47FAA_V1/ na na na haploid bacteria 3238901 3224201 40.500000 0 28 175 NCBI RefSeq GCF_000238675.1-RS_2026_01_15 2026-01-15 3294 2941 126 na GCF_000238715.1 PRJNA224116 SAMN02463798 ACWO00000000.1 na 665944 665944 Klebsiella sp. 4_1_44FAA strain=4_1_44FAA na latest Scaffold Major Full 2011-12-20 Klebsiella_sp_4_1_44FAA_V1 Broad Institute GCA_000238715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/715/GCF_000238715.1_Klebsiella_sp_4_1_44FAA_V1/ na na na haploid bacteria 5525042 5478883 57.000000 0 78 195 NCBI RefSeq GCF_000238715.1-RS_2024_08_05 2024-08-05 5606 5114 111 na GCF_000238755.1 PRJNA224116 SAMN02463793 ACWJ00000000.1 na 665939 665939 Campylobacter sp. 10_1_50 strain=10_1_50 na latest Scaffold Major Full 2011-12-20 Campylobacter_sp_10_1_50_V1 Broad Institute GCA_000238755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/755/GCF_000238755.1_Campylobacter_sp_10_1_50_V1/ na na na haploid bacteria 1895632 1890008 39.500000 0 13 32 NCBI RefSeq GCF_000238755.1-RS_2025_08_25 2025-08-25 1978 1876 52 na GCF_000238775.2 PRJNA224116 SAMN00016772 AFEJ00000000.2 na 310037 310037 Acaryochloris sp. CCMEE 5410 strain=CCMEE 5410 na latest Contig Major Full 2022-10-04 ASM23877v3 The Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000238775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/775/GCF_000238775.2_ASM23877v3/ na na na haploid bacteria 8094429 8094429 47.000000 21 23 23 NCBI RefSeq GCF_000238775.2-RS_2024_11_06 2024-11-06 7607 7078 84 21697100;34791212 GCF_000238795.1 PRJNA224116 SAMN02393707 AFNK00000000.1 na 1035839 1078480 Haemophilus sputorum CCUG 13788 strain=CCUG 13788 na latest Contig Major Full 2011-06-01 ASM23879v2 BiRC GCA_000238795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/795/GCF_000238795.1_ASM23879v2/ na assembly from type material na haploid bacteria 2143543 2143543 39.500000 0 87 87 NCBI RefSeq GCF_000238795.1-RS_2026_04_23 2026-04-23 2123 2034 55 na GCF_000238835.1 PRJNA224116 SAMN02299435 AGEY00000000.1 na 797515 390842 Lentilactobacillus parafarraginis F0439 strain=F0439 na latest Scaffold Major Full 2011-12-20 ASM23883v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000238835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/835/GCF_000238835.1_ASM23883v1/ na na na haploid bacteria 2854910 2852137 45.500000 0 165 212 NCBI RefSeq GCF_000238835.1-RS_2025_09_10 2025-09-10 2918 2649 51 na GCF_000238895.1 PRJNA224116 SAMD00036591 BADV00000000.1 na 1097676 1097676 Pseudoalteromonas sp. BSi20429 strain=BSi20429 na latest Contig Major Full 2011-11-25 PspBSi20429_1.0 Shandong University GCA_000238895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/895/GCF_000238895.1_PspBSi20429_1.0/ na na na haploid bacteria 4495777 4495777 39.000000 0 121 121 NCBI RefSeq GCF_000238895.1-RS_2024_08_16 2024-08-16 4028 3893 74 22275105 GCF_000238915.1 PRJNA224116 SAMD00041813 BAEG00000000.1 reference genome 1077972 1665 Arthrobacter globiformis NBRC 12137 strain=NBRC 12137 na latest Contig Major Full 2011-12-02 ASM23891v2 National Institute of Technology and Evaluation GCA_000238915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/915/GCF_000238915.1_ASM23891v2/ na assembly from type material na haploid bacteria 4954410 4954410 66.000000 0 125 125 NCBI RefSeq GCF_000238915.1-RS_2024_09_02 2024-09-02 4544 4375 55 na GCF_000239035.1 PRJNA224116 SAMN02470911 AHAS00000000.1 na 1091046 36809 Mycobacteroides abscessus subsp. bolletii BD strain=BD na latest Contig Major Full 2011-12-20 ASM23903v2 Chungnam National University GCA_000239035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/035/GCF_000239035.1_ASM23903v2/ na assembly from type material na haploid bacteria 5048007 5048007 64.000000 0 22 22 NCBI RefSeq GCF_000239035.1-RS_2026_04_17 2026-04-17 4999 4879 54 22535937 GCF_000239055.1 PRJNA224116 SAMN02470910 AHAR00000000.1 na 1001714 36809 Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 strain=CCUG 48898 na latest Contig Major Full 2011-12-20 ASM23905v2 Chungnam National University GCA_000239055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/055/GCF_000239055.1_ASM23905v2/ na assembly from type material na haploid bacteria 4969787 4969787 64.000000 0 18 18 NCBI RefSeq GCF_000239055.1-RS_2026_04_17 2026-04-17 4946 4823 53 na GCF_000239075.1 PRJNA224116 SAMN02472142 AGSW00000000.1 na 1055352 1055352 Streptomyces sp. W007 strain=W007 na latest Contig Major Full 2011-12-20 ASM23907v2 Yantai Institute of Coastal Zone Research,Chinese Academy of Sciences GCA_000239075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/075/GCF_000239075.1_ASM23907v2/ na na na haploid bacteria 9057348 9057348 71.500000 0 284 284 NCBI RefSeq GCF_000239075.1-RS_2025_08_27 2025-08-27 8222 7780 74 22374958 GCF_000239095.1 PRJNA224116 SAMN02471513 AEDZ00000000.1 na 873127 1352 Enterococcus faecium E4453 strain=E4453 na latest Contig Major Full 2011-12-20 ASM23909v2 University Medical Center Utrecht, Department of Medical Microbiology, The Netherlands, Utrecht GCA_000239095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/095/GCF_000239095.1_ASM23909v2/ na na na haploid bacteria 2819308 2819308 38.000000 0 374 374 NCBI RefSeq GCF_000239095.1-RS_2025_04_20 2025-04-20 2855 2723 33 22363425 GCF_000239115.1 PRJNA224116 SAMN02471474 AEOU00000000.1 na 933356 1352 Enterococcus faecium E4452 strain=E4452 na latest Contig Major Full 2011-12-20 ASM23911v2 Department of Medical Microbiology, University Medical Center Utrecht GCA_000239115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/115/GCF_000239115.1_ASM23911v2/ na na na haploid bacteria 2769032 2769032 38.000000 0 268 268 NCBI RefSeq GCF_000239115.1-RS_2025_04_20 2025-04-20 2747 2639 30 22363425 GCF_000239135.1 PRJNA224116 SAMN02470012 AGVW00000000.2 na 1114961 1829 Rhodococcus rhodochrous BKS6-46 strain=BKS6-46 na latest Contig Major Full 2012-05-30 ASM23913v3 Institute of Microbial Technology(IMTECH),Chandigarh,India GCA_000239135.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/135/GCF_000239135.1_ASM23913v3/ na na na haploid bacteria 6213641 6213641 67.500000 0 609 609 NCBI RefSeq GCF_000239135.1-RS_2025_02_17 2025-02-17 6030 5830 60 na GCF_000239155.1 PRJNA224116 SAMN02470010 AGVX00000000.2 reference genome 1114962 252394 Actinoalloteichus spitiensis RMV-1378 strain=RMV-1378 na latest Contig Major Full 2012-05-31 ASM23915v2 Institute of Microbial Technology(IMTECH),Chandigarh,India GCA_000239155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/155/GCF_000239155.1_ASM23915v2/ na assembly from type material na haploid bacteria 5706534 5706534 72.500000 0 888 888 NCBI RefSeq GCF_000239155.1-RS_2026_05_01 2026-05-01 5109 4906 52 na GCF_000239175.1 PRJNA224116 SAMN02603182 na na 933093 446 Legionella pneumophila subsp. pneumophila ATCC 43290 strain=ATCC 43290 na latest Complete Genome Major Full 2011-12-21 ASM23917v1 Department of Microbiology - University of Chicago GCA_000239175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/175/GCF_000239175.1_ASM23917v1/ na na na haploid bacteria 3359001 3359001 38.000000 1 1 1 NCBI RefSeq GCF_000239175.1-RS_2026_03_27 2026-03-27 3019 2945 56 22374950 GCF_000239195.1 PRJNA224116 SAMN02603249 na na 347495 1396 Bacillus cereus F837/76 strain=F837/76 na latest Complete Genome Major Full 2011-12-21 ASM23919v1 Genoscope GCA_000239195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/195/GCF_000239195.1_ASM23919v1/ na na na haploid bacteria 5288498 5288498 35.500000 3 3 3 NCBI RefSeq GCF_000239195.1-RS_2025_09_19 2025-09-19 5503 5152 146 22374959 GCF_000239235.1 PRJNA224116 SAMN02603886 na na 1123523 1280 Staphylococcus aureus subsp. aureus 11819-97 strain=11819-97 na latest Complete Genome Major Full 2011-12-21 ASM23923v1 Statens Serum Institut GCA_000239235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/235/GCF_000239235.1_ASM23923v1/ na na na haploid bacteria 2868863 2868863 33.000000 2 2 2 NCBI RefSeq GCF_000239235.1-RS_2025_04_15 2025-04-15 2873 2717 78 22374956 GCF_000239255.1 PRJNA224116 SAMN02299450 AGCI00000000.1 na 1002364 569 Hafnia alvei ATCC 51873 strain=ATCC 51873 na latest Scaffold Major Full 2011-12-21 ASM23925v1 Washington University Genome Center GCA_000239255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/255/GCF_000239255.1_ASM23925v1/ na na na haploid bacteria 4883880 4880983 48.000000 0 79 118 NCBI RefSeq GCF_000239255.1-RS_2025_07_22 2025-07-22 4559 4411 78 na GCF_000239275.1 PRJNA224116 SAMN02299437 AGCJ00000000.1 reference genome 861450 156456 Megasphaera geminata F0357 strain=F0357 na latest Scaffold Major Full 2011-12-21 ASM23927v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000239275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/275/GCF_000239275.1_ASM23927v1/ na na na haploid bacteria 1798854 1794202 49.000000 0 57 103 NCBI RefSeq GCF_000239275.1-RS_2026_05_01 2026-05-01 1922 1723 51 na GCF_000239295.1 PRJNA224116 SAMN00627089 AGCK00000000.1 na 411475 292800 Flavonifractor plautii ATCC 29863 strain=ATCC 29863 na latest Scaffold Major Full 2011-12-21 ASM23929v1 Washington University Genome Sequencing Center GCA_000239295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/295/GCF_000239295.1_ASM23929v1/ na assembly from type material na haploid bacteria 3820124 3813599 61.000000 0 242 344 NCBI RefSeq GCF_000239295.1-RS_2026_02_05 2026-02-05 3886 3738 61 na GCF_000239335.1 PRJNA224116 SAMN02299454 AGCL00000000.1 na 1002368 158877 Yokenella regensburgei ATCC 43003 strain=ATCC 43003 na latest Scaffold Major Full 2011-12-21 ASM23933v1 Washington University Genome Center GCA_000239335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/335/GCF_000239335.1_ASM23933v1/ na na na haploid bacteria 4681222 4680108 55.000000 0 16 48 NCBI RefSeq GCF_000239335.1-RS_2025_07_15 2025-07-15 4514 4398 69 na GCF_000239355.1 PRJNA224116 SAMN02299434 AGCM00000000.1 na 797473 194702 Cardiobacterium valvarum F0432 strain=F0432 na latest Scaffold Major Full 2011-12-21 ASM23935v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000239355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/355/GCF_000239355.1_ASM23935v1/ na na na haploid bacteria 2553535 2547857 58.000000 0 98 198 NCBI RefSeq GCF_000239355.1-RS_2025_07_15 2025-07-15 2663 2468 53 na GCF_000239475.1 PRJNA224116 SAMN02603389 na reference genome 1081646 29519 Borreliella garinii BgVir strain=BgVir na latest Complete Genome Major Full 2011-12-22 ASM23947v1 Institute of Chemical Biology and Fundamental Medicine SB RAS GCA_000239475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/475/GCF_000239475.1_ASM23947v1/ na na na haploid bacteria 993811 993811 28.500000 3 3 3 NCBI RefSeq GCF_000239475.1-RS_2026_02_06 2026-02-06 960 894 41 23012288 GCF_000239555.1 PRJNA224116 SAMN00116844 AGTV00000000.1 na 904766 1280 Staphylococcus aureus subsp. aureus 21331 strain=21331 na latest Contig Major Full 2011-12-22 ASM23955v2 J. Craig Venter Institute GCA_000239555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/555/GCF_000239555.1_ASM23955v2/ na na na haploid bacteria 2665322 2665322 33.000000 0 40 40 NCBI RefSeq GCF_000239555.1-RS_2025_08_18 2025-08-18 2646 2505 62 na GCF_000239575.1 PRJNA224116 SAMN00116845 AGTW00000000.1 na 904768 1280 Staphylococcus aureus subsp. aureus 21334 strain=21334 na latest Contig Major Full 2011-12-22 ASM23957v2 J. Craig Venter Institute GCA_000239575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/575/GCF_000239575.1_ASM23957v2/ na na na haploid bacteria 2773658 2773658 32.500000 0 44 44 NCBI RefSeq GCF_000239575.1-RS_2025_08_16 2025-08-16 2812 2667 61 na GCF_000239595.1 PRJNA224116 SAMN00116872 AGTX00000000.1 na 904771 1280 Staphylococcus aureus subsp. aureus 21340 strain=21340 na latest Contig Major Full 2011-12-22 ASM23959v2 J. Craig Venter Institute GCA_000239595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/595/GCF_000239595.1_ASM23959v2/ na na na haploid bacteria 2803858 2803858 32.500000 0 48 48 NCBI RefSeq GCF_000239595.1-RS_2025_08_17 2025-08-17 2860 2720 64 na GCF_000239615.1 PRJNA224116 SAMN00116881 AGTY00000000.1 na 904737 1280 Staphylococcus aureus subsp. aureus 21232 strain=21232 na latest Contig Major Full 2011-12-22 ASM23961v2 J. Craig Venter Institute GCA_000239615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/615/GCF_000239615.1_ASM23961v2/ na na na haploid bacteria 2758530 2758530 32.500000 0 53 53 NCBI RefSeq GCF_000239615.1-RS_2025_08_18 2025-08-18 2777 2643 68 na GCF_000239635.1 PRJNA224116 SAMN02436364 AGRN00000000.1 na 904724 1280 Staphylococcus aureus subsp. aureus 21178 strain=21178 na latest Contig Major Full 2011-12-21 ASM23963v2 J. Craig Venter Institute GCA_000239635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/635/GCF_000239635.1_ASM23963v2/ na na na haploid bacteria 2975585 2975585 32.500000 0 109 109 NCBI RefSeq GCF_000239635.1-RS_2025_08_16 2025-08-16 3054 2896 62 na GCF_000239655.1 PRJNA224116 SAMN00116869 AGRO00000000.1 na 904732 1280 Staphylococcus aureus subsp. aureus 21202 strain=21202 na latest Contig Major Full 2011-12-21 ASM23965v2 J. Craig Venter Institute GCA_000239655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/655/GCF_000239655.1_ASM23965v2/ na na na haploid bacteria 2775807 2775807 32.500000 0 78 78 NCBI RefSeq GCF_000239655.1-RS_2025_08_16 2025-08-16 2821 2653 63 na GCF_000239675.1 PRJNA224116 SAMN00116848 AGRP00000000.1 na 904735 1280 Staphylococcus aureus subsp. aureus 21209 strain=21209 na latest Contig Major Full 2011-12-21 ASM23967v2 J. Craig Venter Institute GCA_000239675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/675/GCF_000239675.1_ASM23967v2/ na na na haploid bacteria 2885309 2885309 32.500000 0 95 95 NCBI RefSeq GCF_000239675.1-RS_2025_08_17 2025-08-17 2974 2808 64 na GCF_000239695.1 PRJNA224116 SAMN02463758 ACRN00000000.1 reference genome 435830 55565 Actinomyces graevenitzii C83 strain=C83 na latest Scaffold Major Full 2011-12-22 Acti_grae_C83_V1 Broad Institute GCA_000239695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/695/GCF_000239695.1_Acti_grae_C83_V1/ na na na haploid bacteria 2205725 2196917 58.000000 0 10 25 NCBI RefSeq GCF_000239695.1-RS_2026_02_06 2026-02-06 1926 1808 65 na GCF_000239715.1 PRJNA224116 SAMN02463764 ACTB00000000.1 na 653386 653385 Actinomyces sp. oral taxon 849 str. F0330 strain=F0330 na latest Scaffold Major Full 2011-12-22 Actinomyces_sp_F0330_V1 Broad Institute GCA_000239715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/715/GCF_000239715.1_Actinomyces_sp_F0330_V1/ na na na haploid bacteria 3459374 3385844 67.000000 0 76 255 NCBI RefSeq GCF_000239715.1-RS_2025_08_25 2025-08-25 3049 2791 64 na GCF_000239755.1 PRJNA224116 SAMEA3138405 CAFH00000000.1 na 115808 115808 Bradyrhizobium sp. ORS 285 strain=ORS 285 na latest Contig Major Full 2011-12-22 ASM23975v2 IRD LSTM GCA_000239755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/755/GCF_000239755.1_ASM23975v2/ na na na haploid bacteria 7602254 7602254 65.000000 0 301 301 NCBI RefSeq GCF_000239755.1-RS_2024_06_14 2024-06-14 6822 6642 57 24704842 GCF_000239775.1 PRJNA224116 SAMEA3138406 CAFI00000000.1 na 566679 566679 Bradyrhizobium sp. ORS 375 strain=ORS375 na latest Scaffold Major Full 2011-12-22 ASM23977v2 CEA IG Genoscope GCA_000239775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/775/GCF_000239775.1_ASM23977v2/ na na na haploid bacteria 7859468 7859458 65.500000 0 497 498 NCBI RefSeq GCF_000239775.1-RS_2024_06_14 2024-06-14 7232 6995 57 24704842 GCF_000239795.1 PRJNA224116 SAMEA2272567 CAFJ00000000.1 na 551936 551936 Bradyrhizobium sp. STM 3809 strain=STM 3809 na latest Contig Major Full 2011-12-22 ASM23979v2 CEA IG Genoscope GCA_000239795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/795/GCF_000239795.1_ASM23979v2/ na na na haploid bacteria 7311748 7311748 66.000000 0 803 803 NCBI RefSeq GCF_000239795.1-RS_2024_06_14 2024-06-14 6982 6727 54 24704842 GCF_000239815.1 PRJNA224116 SAMEA2272016 CAFK00000000.1 na 551947 551947 Bradyrhizobium sp. STM 3843 strain=STM 3843 na latest Scaffold Major Full 2011-12-22 ASM23981v2 CEA IG Genoscope GCA_000239815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/815/GCF_000239815.1_ASM23981v2/ na na na haploid bacteria 8434788 8434777 63.500000 0 350 351 NCBI RefSeq GCF_000239815.1-RS_2024_05_27 2024-05-27 7861 7659 56 24704842 GCF_000239855.1 PRJNA224116 SAMD00036589 BADT00000000.1 na 388384 388384 Pseudoalteromonas sp. BSi20652 strain=BSi20652 na latest Contig Major Full 2011-12-19 PspBSi20652_1.0 Shandong University GCA_000239855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/855/GCF_000239855.1_PspBSi20652_1.0/ na na na haploid bacteria 4253936 4253936 39.000000 0 298 298 NCBI RefSeq GCF_000239855.1-RS_2024_08_17 2024-08-17 3972 3598 61 22275105 GCF_000239875.1 PRJNA224116 SAMD00036590 BADU00000000.1 na 383911 383911 Pseudoalteromonas sp. BSi20311 strain=BSi20311 na latest Contig Major Full 2011-11-23 PspBSi20311_1.0 Shandong University GCA_000239875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/875/GCF_000239875.1_PspBSi20311_1.0/ na na na haploid bacteria 3979836 3979836 40.500000 0 195 195 NCBI RefSeq GCF_000239875.1-RS_2024_08_17 2024-08-17 3727 3563 82 22275105 GCF_000239895.1 PRJNA224116 SAMEA2272656 CAGE00000000.1 na 1108974 33964 Leuconostoc citreum LBAE C10 strain=LBAE C10 na latest Contig Major Full 2011-12-22 ASM23989v2 LISBP GCA_000239895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/895/GCF_000239895.1_ASM23989v2/ na na na haploid bacteria 1934425 1934425 39.000000 0 76 76 NCBI RefSeq GCF_000239895.1-RS_2025_07_30 2025-07-30 1987 1895 54 na GCF_000239915.1 PRJNA224116 SAMEA2272136 CAGF00000000.1 na 1127128 33964 Leuconostoc citreum LBAE C11 strain=LBAE C11 na latest Contig Major Full 2011-12-22 ASM23991v2 LISBP GCA_000239915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/915/GCF_000239915.1_ASM23991v2/ na na na haploid bacteria 1969963 1969963 38.500000 0 83 83 NCBI RefSeq GCF_000239915.1-RS_2025_07_30 2025-07-30 2022 1894 54 na GCF_000239935.1 PRJNA224116 SAMEA2272523 CAGG00000000.1 na 1127129 33964 Leuconostoc citreum LBAE E16 strain=LBAE E16 na latest Contig Major Full 2011-12-22 ASM23993v2 LISBP GCA_000239935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/935/GCF_000239935.1_ASM23993v2/ na na na haploid bacteria 1801604 1801604 39.000000 0 45 45 NCBI RefSeq GCF_000239935.1-RS_2025_07_30 2025-07-30 1843 1759 55 na GCF_000239955.1 PRJNA224116 SAMEA2272020 CAGH00000000.1 na 1127131 1583 Weissella confusa LBAE C39-2 strain=LBAE C39-2 na latest Contig Major Full 2011-12-22 ASM23995v2 LISBP GCA_000239955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/239/955/GCF_000239955.1_ASM23995v2/ na na na haploid bacteria 2284024 2284024 45.000000 0 71 71 NCBI RefSeq GCF_000239955.1-RS_2025_07_30 2025-07-30 2246 2129 87 na GCF_000240015.1 PRJNA224116 SAMN02602998 na na 1114966 1747 Cutibacterium acnes TypeIA2 P.acn33 strain=P.acn33 na latest Complete Genome Major Full 2011-12-23 ASM24001v1 BAYGEN GCA_000240015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/015/GCF_000240015.1_ASM24001v1/ na na na haploid bacteria 2489623 2489623 60.000000 1 1 1 NCBI RefSeq GCF_000240015.1-RS_2026_03_27 2026-03-27 2439 2314 58 22374954 GCF_000240035.1 PRJNA224116 SAMN02602999 na na 1114967 1747 Cutibacterium acnes TypeIA2 P.acn17 strain=P.acn17 na latest Complete Genome Major Full 2011-12-23 ASM24003v1 BAYGEN GCA_000240035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/035/GCF_000240035.1_ASM24003v1/ na na na haploid bacteria 2522885 2522885 60.000000 1 1 1 NCBI RefSeq GCF_000240035.1-RS_2026_03_27 2026-03-27 2467 2340 58 22374954 GCF_000240055.1 PRJNA224116 SAMN02603000 na na 1114969 1747 Cutibacterium acnes TypeIA2 P.acn31 strain=P.acn31 na latest Complete Genome Major Full 2011-12-23 ASM24005v1 BAYGEN GCA_000240055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/055/GCF_000240055.1_ASM24005v1/ na na na haploid bacteria 2498766 2498766 60.000000 1 1 1 NCBI RefSeq GCF_000240055.1-RS_2026_03_20 2026-03-20 2442 2322 58 22374954 GCF_000240075.2 PRJNA224116 SAMN02603612 na na 1041826 996 Flavobacterium columnare ATCC 49512 strain=ATCC 49512 na latest Complete Genome Major Full 2012-01-19 ASM24007v2 Mississippi State University GCA_000240075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/075/GCF_000240075.2_ASM24007v2/ na na na haploid bacteria 3162432 3162432 31.500000 1 1 1 NCBI RefSeq GCF_000240075.2-RS_2025_09_07 2025-09-07 2789 2656 92 22535941 GCF_000240095.2 PRJNA224116 SAMN02470679 na na 1117646 1117645 Elizabethkingia anophelis Ag1 strain=Ag1 na latest Complete Genome Major Full 2017-09-18 ASM24009v3 New Mexico State University GCA_000240095.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/095/GCF_000240095.2_ASM24009v3/ na na na haploid bacteria 4093812 4093812 35.500000 1 1 1 NCBI RefSeq GCF_000240095.2-RS_2025_12_04 2025-12-04 3808 3726 71 24309745 GCF_000240115.1 PRJNA224116 SAMN02469693 AGAH00000000.1 na 1075091 1509 Clostridium sporogenes PA 3679 strain=PA 3679 na latest Scaffold Major Full 2011-12-29 ASM24011v1 CSIRO Food and Nutritional Sciences GCA_000240115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/115/GCF_000240115.1_ASM24011v1/ na na na haploid bacteria 4180273 4173562 28.000000 0 107 256 NCBI RefSeq GCF_000240115.1-RS_2026_04_04 2026-04-04 4120 3942 47 22374960 GCF_000240135.3 PRJNA243 SAMN02953593 AACM00000000.2 reference genome 229533 5518 Fusarium graminearum PH-1 strain=PH-1; NRRL 31084 na latest Chromosome Major Full 2008-11-21 ASM24013v3 International Gibberella zeae Genomics Consortium GCA_000240135.3 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/135/GCF_000240135.3_ASM24013v3/ na na na haploid fungi 36458046 36223641 48.500000 4 31 433 International Gibberella zeae Genomics Consortium Annotation submitted by International Gibberella zeae Genomics Consortium 2024-01-02 13725 13312 402 17823352 GCF_000240165.1 PRJNA224116 SAMN02603879 na na 1003195 29303 Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 strain=DSM 46488 na latest Complete Genome Major Full 2011-12-27 ASM24016v1 State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University GCA_000240165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/165/GCF_000240165.1_ASM24016v1/ na assembly from type material na haploid bacteria 8095515 8095515 73.000000 2 2 2 NCBI RefSeq GCF_000240165.1-RS_2026_01_02 2026-01-02 7242 7001 87 na GCF_000240185.1 PRJNA84387 SAMN02602959 na reference genome 1125630 573 Klebsiella pneumoniae subsp. pneumoniae HS11286 strain=HS11286 na latest Complete Genome Major Full 2011-12-27 ASM24018v2 Bioinformatics & Microbial Genomics, State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University GCA_000240185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/185/GCF_000240185.1_ASM24018v2/ na na na haploid bacteria 5682322 5682322 57.000000 7 7 7 NCBI RefSeq Annotation submitted by NCBI RefSeq 2020-06-02 5867 5779 88 22408243 GCF_000240225.1 PRJNA224116 SAMN02391504 AGUD00000000.1 reference genome 1097667 1097667 Patulibacter medicamentivorans strain=I11 na latest Contig Major Full 2011-12-28 ASM24022v2 Aalborg University GCA_000240225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/225/GCF_000240225.1_ASM24022v2/ na assembly from type material na haploid bacteria 5092500 5092500 74.000000 0 353 353 NCBI RefSeq GCF_000240225.1-RS_2026_04_23 2026-04-23 4770 4592 51 23212173 GCF_000240245.1 PRJNA224116 SAMN02469671 AHHX00000000.1 na 1126682 1773 Mycobacterium tuberculosis OSDD071 strain=OSDD071 na latest Contig Major Full 2011-12-28 MycTub_OSDD071 Open Source Drug Discovery GCA_000240245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/245/GCF_000240245.1_MycTub_OSDD071/ na na na haploid bacteria 4285124 4285124 65.500000 0 660 660 NCBI RefSeq GCF_000240245.1-RS_2025_07_09 2025-07-09 4437 4027 50 na GCF_000240265.1 PRJNA224116 SAMN02469672 AHHY00000000.1 na 1126683 1773 Mycobacterium tuberculosis OSDD504 strain=OSDD504 na latest Contig Major Full 2011-12-28 MycTub_OSDD504 Open Source Drug Discovery GCA_000240265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/265/GCF_000240265.1_MycTub_OSDD504/ na na na haploid bacteria 4226640 4226640 65.500000 0 1040 1040 NCBI RefSeq GCF_000240265.1-RS_2025_06_29 2025-06-29 4696 4120 50 na GCF_000240285.1 PRJNA224116 SAMN02469670 AHHZ00000000.1 na 1126684 1773 Mycobacterium tuberculosis OSDD518 strain=OSDD518 na latest Contig Major Full 2011-12-28 MycTub_OSDD518 Open Source Drug Discovery GCA_000240285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/285/GCF_000240285.1_MycTub_OSDD518/ na na na haploid bacteria 4266804 4266804 65.500000 0 685 685 NCBI RefSeq GCF_000240285.1-RS_2025_06_29 2025-06-29 4453 4027 50 na GCF_000240325.1 PRJNA224116 SAMN02603580 na na 1006551 1134687 Klebsiella michiganensis KCTC 1686 strain=KCTC 1686 na latest Complete Genome Major Full 2011-12-29 ASM24032v1 Macrogen Inc. GCA_000240325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/325/GCF_000240325.1_ASM24032v1/ na na na haploid bacteria 5974109 5974109 56.000000 1 1 1 NCBI RefSeq GCF_000240325.1-RS_2025_12_14 2025-12-14 5600 5378 118 22493189 GCF_000240385.1 PRJNA224116 SAMN02472017 AGAK00000000.1 na 1078001 1764 Mycobacterium avium subsp. paratuberculosis 1281 strain=1281 na latest Contig Major Full 2011-12-29 ASM24038v2 University of Wisconsin- Madison GCA_000240385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/385/GCF_000240385.1_ASM24038v2/ na na na haploid bacteria 4755085 4755085 69.500000 0 1030 1030 NCBI RefSeq GCF_000240385.1-RS_2026_04_30 2026-04-30 5235 4632 53 22163226 GCF_000240405.1 PRJNA224116 SAMN02472019 AGAL00000000.1 na 1078002 1764 Mycobacterium avium subsp. paratuberculosis JTC 1285 strain=JTC 1285 na latest Contig Major Full 2011-12-29 ASM24040v2 University of Wisconsin- Madison GCA_000240405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/405/GCF_000240405.1_ASM24040v2/ na na na haploid bacteria 4745157 4745157 69.500000 0 1115 1115 NCBI RefSeq GCF_000240405.1-RS_2026_04_30 2026-04-30 5305 4684 53 22163226 GCF_000240425.1 PRJNA224116 SAMN02472021 AGAM00000000.1 na 1078003 1764 Mycobacterium avium subsp. paratuberculosis 4B strain=4B na latest Contig Major Full 2011-12-29 ASM24042v2 University of Wisconsin- Madison GCA_000240425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/425/GCF_000240425.1_ASM24042v2/ na na na haploid bacteria 4738595 4738595 69.500000 0 479 479 NCBI RefSeq GCF_000240425.1-RS_2026_04_25 2026-04-25 4829 4410 53 22163226 GCF_000240445.1 PRJNA224116 SAMN02472023 AGAN00000000.1 na 1078004 1764 Mycobacterium avium subsp. paratuberculosis DT 3 strain=DT 3 na latest Contig Major Full 2011-12-29 ASM24044v2 University of Wisconsin- Madison GCA_000240445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/445/GCF_000240445.1_ASM24044v2/ na na na haploid bacteria 4725169 4725169 69.500000 0 531 531 NCBI RefSeq GCF_000240445.1-RS_2026_04_25 2026-04-25 4860 4425 53 22163226 GCF_000240465.1 PRJNA224116 SAMN02472020 AGAO00000000.1 na 1078005 1764 Mycobacterium avium subsp. paratuberculosis Env 210 strain=Env 210 na latest Contig Major Full 2011-12-29 ASM24046v2 University of Wisconsin- Madison GCA_000240465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/465/GCF_000240465.1_ASM24046v2/ na na na haploid bacteria 4736143 4736143 69.500000 0 538 538 NCBI RefSeq GCF_000240465.1-RS_2026_04_25 2026-04-25 4862 4427 53 22163226 GCF_000240485.1 PRJNA224116 SAMN02472015 AGAP00000000.1 na 1078011 1764 Mycobacterium avium subsp. avium DT 78 strain=DT 78 na latest Contig Major Full 2011-12-29 ASM24048v2 University of Wisconsin- Madison GCA_000240485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/485/GCF_000240485.1_ASM24048v2/ na na na haploid bacteria 4959832 4959832 69.000000 0 1201 1201 NCBI RefSeq GCF_000240485.1-RS_2026_04_25 2026-04-25 5589 4978 53 22163226 GCF_000240525.1 PRJNA224116 SAMN02472018 AGAR00000000.1 na 1074454 1764 Mycobacterium avium subsp. paratuberculosis ATCC 19698 strain=ATCC 19698 na latest Contig Major Full 2011-12-29 ASM24052v2 University of Wisconsin- Madison GCA_000240525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/525/GCF_000240525.1_ASM24052v2/ na assembly from type material na haploid bacteria 4736327 4736327 69.500000 0 1092 1092 NCBI RefSeq GCF_000240525.1-RS_2025_09_28 2025-09-28 5303 4622 53 22163226 GCF_000240545.1 PRJNA224116 SAMN02471961 AGBN00000000.1 na 1077282 487 Neisseria meningitidis Nm8187 strain=Nm8187 na latest Contig Major Full 2011-12-29 ASM24054v2 University of Toronto GCA_000240545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/545/GCF_000240545.1_ASM24054v2/ na na na haploid bacteria 2083073 2083073 52.000000 0 173 173 NCBI RefSeq GCF_000240545.1-RS_2026_04_21 2026-04-21 2139 1915 59 22084315 GCF_000240565.1 PRJNA224116 SAMN02471969 AGBO00000000.1 na 1079752 487 Neisseria meningitidis Nm3127 strain=Nm3127 na latest Contig Major Full 2011-12-29 ASM24056v2 University of Toronto GCA_000240565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/565/GCF_000240565.1_ASM24056v2/ na na na haploid bacteria 2078784 2078784 52.000000 0 210 210 NCBI RefSeq GCF_000240565.1-RS_2026_04_25 2026-04-25 2153 1922 59 22084315 GCF_000240585.1 PRJNA224116 SAMN02471962 AGBP00000000.1 na 1079753 487 Neisseria meningitidis Nm2732 strain=Nm2732 na latest Contig Major Full 2011-12-29 ASM24058v2 University of Toronto GCA_000240585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/585/GCF_000240585.1_ASM24058v2/ na na na haploid bacteria 2164956 2164956 51.500000 0 229 229 NCBI RefSeq GCF_000240585.1-RS_2025_04_20 2025-04-20 2296 2031 58 22084315 GCF_000240605.1 PRJNA224116 SAMN02471964 AGBQ00000000.1 na 1079754 487 Neisseria meningitidis Nm6938 strain=Nm6938 na latest Contig Major Full 2011-12-29 ASM24060v2 University of Toronto GCA_000240605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/605/GCF_000240605.1_ASM24060v2/ na na na haploid bacteria 2174844 2174844 51.500000 0 193 193 NCBI RefSeq GCF_000240605.1-RS_2025_04_20 2025-04-20 2294 2033 60 22084315 GCF_000240625.1 PRJNA224116 SAMN02471970 AGBR00000000.1 na 1079755 487 Neisseria meningitidis Nm6756 strain=Nm6756 na latest Contig Major Full 2011-12-29 ASM24062v2 University of Toronto GCA_000240625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/625/GCF_000240625.1_ASM24062v2/ na na na haploid bacteria 2057401 2057401 52.000000 0 176 176 NCBI RefSeq GCF_000240625.1-RS_2026_04_24 2026-04-24 2129 1899 59 22084315 GCF_000240645.1 PRJNA224116 SAMN02471967 AGBS00000000.1 na 1079756 487 Neisseria meningitidis Nm8663 strain=Nm8663 na latest Contig Major Full 2011-12-29 ASM24064v2 University of Toronto GCA_000240645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/645/GCF_000240645.1_ASM24064v2/ na na na haploid bacteria 2057887 2057887 52.000000 0 176 176 NCBI RefSeq GCF_000240645.1-RS_2026_07_03 2026-07-03 2111 1890 52 22084315 GCF_000240665.1 PRJNA224116 SAMN02471965 AGBT00000000.1 na 1079757 487 Neisseria meningitidis Nm1140 strain=Nm1140 na latest Contig Major Full 2011-12-29 ASM24066v2 University of Toronto GCA_000240665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/665/GCF_000240665.1_ASM24066v2/ na na na haploid bacteria 2056076 2056076 52.000000 0 152 152 NCBI RefSeq GCF_000240665.1-RS_2026_07_03 2026-07-03 2108 1881 59 22084315 GCF_000240705.2 PRJNA224116 SAMN02469387 AFHN00000000.1 na 1027397 552 Erwinia amylovora ACW56400 strain=ACW56400 na latest Contig Major Full 2012-12-03 ASM24070v2 Center for Biotechnology - CeBiTec GCA_000240705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/705/GCF_000240705.2_ASM24070v2/ na na na haploid bacteria 3860835 3860835 53.500000 2 24 24 NCBI RefSeq GCF_000240705.2-RS_2026_04_18 2026-04-18 3570 3379 88 22174857 GCF_000240765.1 PRJNA224116 SAMN00764905 AHGW00000000.1 na 911598 28025 Bifidobacterium animalis subsp. lactis BS 01 strain=BS 01 na latest Scaffold Major Full 2012-01-04 BifAniBS01_1.0 Probiotical Spa GCA_000240765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/765/GCF_000240765.1_BifAniBS01_1.0/ na na na haploid bacteria 1932595 1932387 60.500000 0 2 7 NCBI RefSeq GCF_000240765.1-RS_2026_01_30 2026-01-30 1621 1537 61 na GCF_000240785.1 PRJNA224116 SAMN00754301 AHHR00000000.1 na 763922 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 80959-06 strain=80959-06 na latest Contig Major Full 2011-12-30 ASM24078v2 FDA GCA_000240785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/785/GCF_000240785.1_ASM24078v2/ na na na haploid bacteria 4646531 4646531 52.000000 0 50 50 NCBI RefSeq GCF_000240785.1-RS_2025_06_03 2025-06-03 4529 4284 81 na GCF_000240825.1 PRJNA224116 SAMN00754303 AHHT00000000.1 na 984241 28901 Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035318 strain=CT_02035318 na latest Contig Major Full 2011-12-30 ASM24082v2 FDA GCA_000240825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/825/GCF_000240825.1_ASM24082v2/ na na na haploid bacteria 4649855 4649855 52.000000 0 50 50 NCBI RefSeq GCF_000240825.1-RS_2025_02_04 2025-02-04 4524 4283 84 22260654 GCF_000240845.1 PRJNA224116 SAMN00754304 AHHU00000000.1 na 984242 28901 Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035320 strain=CT_02035320 na latest Contig Major Full 2011-12-30 ASM24084v2 FDA GCA_000240845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/845/GCF_000240845.1_ASM24084v2/ na na na haploid bacteria 4651093 4651093 52.000000 0 41 41 NCBI RefSeq GCF_000240845.1-RS_2025_02_04 2025-02-04 4528 4273 90 22260654 GCF_000240865.1 PRJNA224116 SAMN00754305 AHHV00000000.1 na 882860 28901 Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035321 strain=CT_02035321 na latest Contig Major Full 2011-12-30 ASM24086v2 FDA GCA_000240865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/865/GCF_000240865.1_ASM24086v2/ na na na haploid bacteria 4652194 4652194 52.000000 0 40 40 NCBI RefSeq GCF_000240865.1-RS_2025_02_04 2025-02-04 4534 4275 90 22260654 GCF_000240885.1 PRJNA224116 SAMN00754306 AHHW00000000.1 na 882862 28901 Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035327 strain=CT_02035327 na latest Contig Major Full 2011-12-30 ASM24088v2 FDA GCA_000240885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/885/GCF_000240885.1_ASM24088v2/ na na na haploid bacteria 4650043 4650043 52.000000 0 57 57 NCBI RefSeq GCF_000240885.1-RS_2025_02_04 2025-02-04 4539 4287 88 22260654 GCF_000240905.2 PRJNA224116 SAMN00754430 na na 941188 28901 Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 strain=ATCC 10729 na latest Complete Genome Major Full 2018-01-05 ASM24090v3 FDA GCA_000240905.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/905/GCF_000240905.2_ASM24090v3/ na na na haploid bacteria 4678025 4678025 52.000000 3 3 3 NCBI RefSeq GCF_000240905.2-RS_2025_03_24 2025-03-24 4571 4310 122 22260654 GCF_000240985.2 PRJNA224116 SAMN02471984 ADOA00000000.2 na 754505 714 Aggregatibacter actinomycetemcomitans D17P-3 strain=D17P-3 na latest Scaffold Major Full 2015-08-17 AaD17P-3v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000240985.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/985/GCF_000240985.2_AaD17P-3v2.0/ na na na haploid bacteria 2284348 2283933 44.500000 0 123 140 NCBI RefSeq GCF_000240985.2-RS_2025_12_23 2025-12-23 2321 2125 58 na GCF_000241005.2 PRJNA224116 SAMN02471983 ADOB00000000.2 na 754506 714 Aggregatibacter actinomycetemcomitans serotype c str. D17P-2 strain=D17P-2 na latest Scaffold Major Full 2015-08-17 AaD17P-2v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000241005.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/005/GCF_000241005.2_AaD17P-2v2.0/ na na na haploid bacteria 2187951 2165460 44.500000 0 51 63 NCBI RefSeq GCF_000241005.2-RS_2026_01_15 2026-01-15 2215 2043 56 23194436 GCF_000241055.1 PRJNA224116 SAMN02471115 AFVZ00000000.1 reference genome 1045004 336988 Oenococcus kitaharae DSM 17330 strain=DSM 17330 na latest Chromosome Major Full 2012-01-05 ASM24105v1 The Australian Wine Research Institute GCA_000241055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/055/GCF_000241055.1_ASM24105v1/ na assembly from type material na haploid bacteria 1842238 1842138 42.500000 2 2 2 NCBI RefSeq GCF_000241055.1-RS_2026_04_14 2026-04-14 1878 1801 54 22235313 GCF_000241125.1 PRJNA224116 SAMN02604225 na na 1129369 2100 Mesomycoplasma hyorhinis GDL-1 strain=GDL-1 na latest Complete Genome Major Full 2012-01-04 ASM24112v1 University of Missouri GCA_000241125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/125/GCF_000241125.1_ASM24112v1/ na na na haploid bacteria 837480 837480 26.000000 1 1 1 NCBI RefSeq GCF_000241125.1-RS_2026_03_26 2026-03-26 759 697 36 22408248 GCF_000241145.1 PRJNA224116 SAMN00016663 AHJG00000000.1 reference genome 859192 1007084 Candidatus Nitrosarchaeum limnium BG20 strain=BG20 na latest Contig Major Full 2012-01-04 ASM24114v2 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000241145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/145/GCF_000241145.1_ASM24114v2/ na na na haploid archaea 1855559 1855559 32.500000 0 343 343 NCBI RefSeq GCF_000241145.1-RS_2026_03_30 2026-03-30 2488 2283 49 22461554 GCF_000241165.1 PRJNA224116 SAMD00036592 BADW00000000.1 na 420915 420915 Pseudoalteromonas sp. BSi20439 strain=BSi20439 na latest Contig Major Full 2011-11-25 PspBSi20439_1.0 Shandong University GCA_000241165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/165/GCF_000241165.1_PspBSi20439_1.0/ na na na haploid bacteria 3882800 3882800 40.000000 0 243 243 NCBI RefSeq GCF_000241165.1-RS_2024_09_16 2024-09-16 3604 3363 84 22275105 GCF_000241185.1 PRJNA224116 SAMD00036594 BADY00000000.1 na 386429 386429 Pseudoalteromonas sp. BSi20495 strain=BSi20495 na latest Contig Major Full 2011-11-25 PspBSi20495_1.0 Shandong University GCA_000241185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/185/GCF_000241185.1_PspBSi20495_1.0/ na na na haploid bacteria 4826524 4826524 39.000000 0 222 222 NCBI RefSeq GCF_000241185.1-RS_2024_09_15 2024-09-15 4299 4076 75 22275105 GCF_000241225.1 PRJNA224116 SAMD00041787 BAEB00000000.1 na 1071390 1071390 Acinetobacter sp. NBRC 100985 strain=NBRC 100985 na latest Contig Major Full 2011-11-25 ASM24122v2 National Institute of Technology and Evaluation GCA_000241225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/225/GCF_000241225.1_ASM24122v2/ na na na haploid bacteria 3518097 3518097 39.000000 0 67 67 NCBI RefSeq GCF_000241225.1-RS_2024_09_16 2024-09-16 3381 3201 68 na GCF_000241245.1 PRJNA224116 SAMD00041788 BAEC00000000.1 na 1111078 285 Comamonas testosteroni NBRC 100989 strain=NBRC 100989 na latest Contig Major Full 2011-11-25 ASM24124v2 National Institute of Technology and Evaluation GCA_000241245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/245/GCF_000241245.1_ASM24124v2/ na na na haploid bacteria 5589358 5589358 62.000000 0 153 153 NCBI RefSeq GCF_000241245.1-RS_2026_03_12 2026-03-12 5171 4986 76 na GCF_000241265.1 PRJNA224116 SAMD00041783 BAEE00000000.1 reference genome 1073574 263909 Gordonia araii NBRC 100433 strain=NBRC 100433 na latest Contig Major Full 2011-11-25 ASM24126v2 National Institute of Technology and Evaluation GCA_000241265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/265/GCF_000241265.1_ASM24126v2/ na assembly from type material na haploid bacteria 3906554 3906554 68.000000 0 98 98 NCBI RefSeq GCF_000241265.1-RS_2025_09_02 2025-09-02 3815 3697 52 na GCF_000241285.1 PRJNA224116 SAMD00036596 BAEF00000000.1 na 1110694 549 Pantoea agglomerans IG1 strain=IG1 na latest Contig Major Full 2011-11-30 ASM24128v2 Department of Bioscience and Biotechnology, Faculty of Agriculture, Kyusyu University GCA_000241285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/285/GCF_000241285.1_ASM24128v2/ na na na haploid bacteria 4829577 4829577 55.000000 0 18 18 NCBI RefSeq GCF_000241285.1-RS_2025_08_09 2025-08-09 4515 4392 73 na GCF_000241305.1 PRJNA224116 SAMD00041782 BAEH00000000.1 reference genome 1077974 263908 Gordonia effusa NBRC 100432 strain=NBRC 100432 na latest Contig Major Full 2011-12-02 ASM24130v2 National Institute of Technology and Evaluation GCA_000241305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/305/GCF_000241305.1_ASM24130v2/ na assembly from type material na haploid bacteria 4703019 4703019 62.500000 0 133 133 NCBI RefSeq GCF_000241305.1-RS_2025_09_02 2025-09-02 4459 4348 57 na GCF_000241325.1 PRJNA224116 SAMD00041829 BAEI00000000.1 na 1077976 84595 Gordonia polyisoprenivorans NBRC 16320 = JCM 10675 strain=NBRC 16320 na latest Contig Major Full 2011-12-02 ASM24132v2 National Institute of Technology and Evaluation GCA_000241325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/325/GCF_000241325.1_ASM24132v2/ na assembly from type material na haploid bacteria 6285478 6285478 67.000000 0 113 113 NCBI RefSeq GCF_000241325.1-RS_2025_09_02 2025-09-02 5651 5500 54 na GCF_000241345.1 PRJNA224116 SAMD00041822 BAED00000000.1 na 1075090 36821 Gordonia amarae NBRC 15530 strain=NBRC 15530 na latest Contig Major Full 2011-11-25 ASM24134v2 National Institute of Technology and Evaluation GCA_000241345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/345/GCF_000241345.1_ASM24134v2/ na assembly from type material na haploid bacteria 5306375 5306375 67.500000 0 83 83 NCBI RefSeq GCF_000241345.1-RS_2025_09_02 2025-09-02 4748 4611 60 na GCF_000241365.1 PRJNA224116 SAMD00036593 BADX00000000.1 na 386428 386428 Pseudoalteromonas sp. BSi20480 strain=BSi20480 na latest Contig Major Full 2011-11-25 PspBSi20480_1.0 Shandong University GCA_000241365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/365/GCF_000241365.1_PspBSi20480_1.0/ na na na haploid bacteria 4149214 4149214 39.500000 0 201 201 NCBI RefSeq GCF_000241365.1-RS_2026_03_16 2026-03-16 3833 3534 69 22275105 GCF_000241385.1 PRJNA224116 SAMN02603160 na na 1116375 1116375 Vibrio sp. EJY3 strain=EJY3 na latest Complete Genome Major Full 2012-01-05 ASM24138v1 Computational & Synthetic Biology Laboratory GCA_000241385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/385/GCF_000241385.1_ASM24138v1/ na na na haploid bacteria 5452646 5452646 45.000000 2 2 2 NCBI RefSeq GCF_000241385.1-RS_2024_09_18 2024-09-18 4922 4718 150 22535948 GCF_000241405.1 PRJNA224116 SAMN02299452 AGCN00000000.1 na 1002366 1642 Listeria innocua ATCC 33091 strain=ATCC 33091 na latest Scaffold Major Full 2012-01-06 ASM24140v1 Washington University Genome Center GCA_000241405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/405/GCF_000241405.1_ASM24140v1/ na na na haploid bacteria 2892121 2890783 37.500000 0 17 45 NCBI RefSeq GCF_000241405.1-RS_2025_07_15 2025-07-15 2922 2845 40 na GCF_000241465.1 PRJNA224116 SAMN02470172 AHIR00000000.1 na 1112212 59803 Sphingomonas echinoides ATCC 14820 strain=ATCC 14820 na latest Scaffold Major Full 2012-01-06 ASM24146v1 Korea Polar Research Institute GCA_000241465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/465/GCF_000241465.1_ASM24146v1/ na assembly from type material na haploid bacteria 4264936 4180007 64.500000 0 6 64 NCBI RefSeq GCF_000241465.1-RS_2026_05_01 2026-05-01 4028 3939 51 22408244 GCF_000241485.1 PRJNA224116 SAMN02470159 AHIS00000000.1 na 1112214 1112214 Sphingomonas sp. PAMC 26605 strain=PAMC 26605 na latest Scaffold Major Full 2012-01-06 ASM24148v1 Korea Polar Research Institute GCA_000241485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/485/GCF_000241485.1_ASM24148v1/ na na na haploid bacteria 4798322 4662119 66.000000 0 23 166 NCBI RefSeq GCF_000241485.1-RS_2025_08_25 2025-08-25 4523 4372 51 22374946 GCF_000241525.1 PRJNA224116 SAMN02470044 AHIL00000000.1 na 1009852 285 Comamonas testosteroni ATCC 11996 strain=ATCC 11996 na latest Contig Major Full 2012-01-06 ASM24152v2 Institute of Toxicology and Pharmacology for Natural Scientists, University Medical School, Schleswig-Holstein, Campus Kiel GCA_000241525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/525/GCF_000241525.1_ASM24152v2/ na assembly from type material na haploid bacteria 5410155 5410155 61.500000 0 63 63 NCBI RefSeq GCF_000241525.1-RS_2026_03_27 2026-03-27 5010 4868 73 22374961 GCF_000241625.1 PRJNA224116 SAMD00036553 BACG00000000.1 na 940265 438 Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471 strain=IFO 3191 na latest Contig Major Full 2012-01-06 ASM24162v2 Yamaguchi University GCA_000241625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/625/GCF_000241625.1_ASM24162v2/ na assembly from type material na haploid bacteria 2888200 2888200 53.000000 0 306 306 NCBI RefSeq GCF_000241625.1-RS_2024_12_15 2024-12-15 2778 2629 48 22016572 GCF_000241705.1 PRJNA224116 SAMN02435969 AHAI00000000.1 na 1116235 470 Acinetobacter baumannii AB5256 strain=AB5256 na latest Contig Major Full 2012-01-06 ASM24170v2 University of Maryland School of Medicine GCA_000241705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/705/GCF_000241705.1_ASM24170v2/ na na na haploid bacteria 4158015 4158015 39.000000 0 50 50 NCBI RefSeq GCF_000241705.1-RS_2026_01_25 2026-01-25 3965 3751 117 22374953 GCF_000241725.1 PRJNA224116 SAMN02436013 AHAJ00000000.1 na 1116236 470 Acinetobacter baumannii AB5711 strain=AB5711 na latest Contig Major Full 2012-01-06 ASM24172v2 University of Maryland School of Medicine GCA_000241725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/725/GCF_000241725.1_ASM24172v2/ na na na haploid bacteria 4000401 4000401 39.000000 0 45 45 NCBI RefSeq GCF_000241725.1-RS_2025_09_10 2025-09-10 3913 3695 114 22374953 GCF_000241785.1 PRJNA224116 SAMN02470712 AHIH00000000.1 na 1088719 668 Aliivibrio fischeri SR5 strain=SR5 na latest Chromosome Major Full 2012-01-10 ASM24178v1 Northwestern University GCA_000241785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/785/GCF_000241785.1_ASM24178v1/ na na na haploid bacteria 4273614 4272414 38.500000 2 63 75 NCBI RefSeq GCF_000241785.1-RS_2026_04_05 2026-04-05 3965 3754 180 22374964 GCF_000241815.1 PRJNA224116 SAMN02261371 AGCQ00000000.1 na 880073 187145 Caldithrix abyssi DSM 13497 strain=DSM 13497 na latest Chromosome Major Full 2012-01-10 ASM24181v1 JGI GCA_000241815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/815/GCF_000241815.1_ASM24181v1/ na assembly from type material na haploid bacteria 4955439 4955239 45.000000 1 1 3 NCBI RefSeq GCF_000241815.1-RS_2025_09_10 2025-09-10 3858 3773 52 na GCF_000241855.1 PRJNA224116 SAMN02603750 na na 1087452 1719 Corynebacterium pseudotuberculosis 3/99-5 strain=3/99-5 na latest Complete Genome Major Full 2012-01-10 ASM24185v1 Rede Paraense de Genomica e Proteomica GCA_000241855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/855/GCF_000241855.1_ASM24185v1/ na na na haploid bacteria 2337938 2337938 52.000000 1 1 1 NCBI RefSeq GCF_000241855.1-RS_2026_03_27 2026-03-27 2127 2006 63 22887652 GCF_000241875.1 PRJNA224116 SAMN02603066 na na 698962 1717 Corynebacterium diphtheriae 31A strain=31A na latest Complete Genome Major Full 2012-01-10 ASM24187v1 Center for Biotechnology, Bielefeld University GCA_000241875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/875/GCF_000241875.1_ASM24187v1/ na na na haploid bacteria 2535346 2535346 53.500000 1 1 1 NCBI RefSeq GCF_000241875.1-RS_2026_02_06 2026-02-06 2458 2305 67 22505676 GCF_000241895.1 PRJNA224116 SAMN02603070 na na 698966 1717 Corynebacterium diphtheriae 241 strain=241 na latest Complete Genome Major Full 2012-01-10 ASM24189v1 Center for Biotechnology, Bielefeld University GCA_000241895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/895/GCF_000241895.1_ASM24189v1/ na na na haploid bacteria 2426551 2426551 53.500000 1 1 1 NCBI RefSeq GCF_000241895.1-RS_2026_04_02 2026-04-02 2314 2172 67 22505676 GCF_000241915.1 PRJNA224116 SAMN02603075 na na 698972 1717 Corynebacterium diphtheriae INCA 402 strain=INCA 402 na latest Complete Genome Major Full 2012-01-10 ASM24191v1 Center for Biotechnology, Bielefeld University GCA_000241915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/915/GCF_000241915.1_ASM24191v1/ na na na haploid bacteria 2449071 2449071 53.500000 1 1 1 NCBI RefSeq GCF_000241915.1-RS_2026_02_06 2026-02-06 2332 2189 68 22505676 GCF_000241935.1 PRJNA224116 SAMN02603077 na na 698973 1717 Corynebacterium diphtheriae BH8 strain=BH8 na latest Complete Genome Major Full 2012-01-10 ASM24193v1 Center for Biotechnology, Bielefeld University GCA_000241935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/935/GCF_000241935.1_ASM24193v1/ na na na haploid bacteria 2485519 2485519 53.500000 1 1 1 NCBI RefSeq GCF_000241935.1-RS_2026_02_06 2026-02-06 2414 2244 70 22505676 GCF_000241955.1 PRJNA224116 SAMN02261385 na reference genome 745277 34038 Rahnella aquatilis CIP 78.65 = ATCC 33071 strain=CIP 78.65 na latest Chromosome Major Full 2012-01-10 ASM24195v1 JGI GCA_000241955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/955/GCF_000241955.1_ASM24195v1/ na assembly from type material na haploid bacteria 5448900 5446950 52.000000 4 4 5 NCBI RefSeq GCF_000241955.1-RS_2026_03_27 2026-03-27 5008 4826 108 22582378 GCF_000241975.1 PRJNA224116 SAMN02596700 AEXH00000000.1 na 656398 562 Escherichia coli H397 strain=H397 na latest Scaffold Major Full 2012-01-10 Esch_coli_H397_V1 Broad Institute GCA_000241975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/975/GCF_000241975.1_Esch_coli_H397_V1/ na na na haploid bacteria 5242596 5209129 50.500000 0 39 120 NCBI RefSeq GCF_000241975.1-RS_2025_06_13 2025-06-13 5258 4863 114 na GCF_000241995.1 PRJNA224116 SAMN02596699 AEXG00000000.1 na 550685 562 Escherichia coli E101 strain=E101 na latest Scaffold Major Full 2012-01-10 Esch_coli_E101_V1 Broad Institute GCA_000241995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/241/995/GCF_000241995.1_Esch_coli_E101_V1/ na na na haploid bacteria 5181904 5181904 50.500000 0 95 95 NCBI RefSeq GCF_000241995.1-RS_2025_06_13 2025-06-13 5133 4774 121 na GCF_000242015.1 PRJNA224116 SAMN02596698 AEXF00000000.1 na 550674 562 Escherichia coli B093 strain=B093 na latest Scaffold Major Full 2012-01-10 Esch_coli_B093_V1 Broad Institute GCA_000242015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/015/GCF_000242015.1_Esch_coli_B093_V1/ na na na haploid bacteria 5205351 5190898 50.500000 0 104 186 NCBI RefSeq GCF_000242015.1-RS_2025_06_13 2025-06-13 5130 4769 94 na GCF_000242035.1 PRJNA224116 SAMN02596701 AFQH00000000.1 na 656405 562 Escherichia coli H494 strain=H494 na latest Scaffold Major Full 2012-01-10 Esch_coli_H494_V1 Broad Institute GCA_000242035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/035/GCF_000242035.1_Esch_coli_H494_V1/ na na na haploid bacteria 5107409 5093196 50.500000 0 40 114 NCBI RefSeq GCF_000242035.1-RS_2025_06_13 2025-06-13 5098 4674 123 na GCF_000242055.1 PRJNA224116 SAMN02596702 AFQI00000000.1 na 656435 562 Escherichia coli TA124 strain=TA124 na latest Scaffold Major Full 2012-01-10 Esch_coli_TA124_V1 Broad Institute GCA_000242055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/055/GCF_000242055.1_Esch_coli_TA124_V1/ na na na haploid bacteria 4936245 4918175 50.500000 0 75 127 NCBI RefSeq GCF_000242055.1-RS_2025_06_13 2025-06-13 4810 4460 100 na GCF_000242075.2 PRJNA224116 SAMN02463909 AGEC00000000.2 na 883150 76832 Myroides odoratimimus CCUG 10230 strain=CCUG 10230 na latest Scaffold Major Full 2013-06-21 Myro_odor_CCUG_10230_V2 Broad Institute GCA_000242075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/075/GCF_000242075.2_Myro_odor_CCUG_10230_V2/ na na na haploid bacteria 4026612 3992214 34.000000 0 7 38 NCBI RefSeq GCF_000242075.2-RS_2025_12_04 2025-12-04 3618 3502 88 na GCF_000242095.1 PRJNA224116 SAMN02463910 AGED00000000.1 na 883152 76832 Myroides odoratimimus CCUG 12901 strain=CCUG 12901 na latest Scaffold Major Full 2012-01-11 Myro_odor_CCUG_12901_V1 Broad Institute GCA_000242095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/095/GCF_000242095.1_Myro_odor_CCUG_12901_V1/ na na na haploid bacteria 4070988 4037729 34.000000 0 3 54 NCBI RefSeq GCF_000242095.1-RS_2025_12_04 2025-12-04 3665 3548 88 na GCF_000242115.1 PRJNA224116 SAMN02469910 AHIP00000000.1 na 1117958 359110 Pseudomonas extremaustralis 14-3 substr. 14-3b strain=14-3 substr. 14-3b na latest Contig Major Full 2012-01-10 Pext14-3B_1.0 INDEAR GCA_000242115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/115/GCF_000242115.1_Pext14-3B_1.0/ na assembly from type material na haploid bacteria 6586244 6586244 60.500000 0 135 135 NCBI RefSeq GCF_000242115.1-RS_2025_08_18 2025-08-18 6228 5993 70 22493195 GCF_000242135.1 PRJNA224116 SAMN02463911 AGEE00000000.1 na 883154 76832 Myroides odoratimimus CIP 101113 strain=CIP 101113 na latest Scaffold Major Full 2012-01-11 Myro_odor_CIP_101113_V1 Broad Institute GCA_000242135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/135/GCF_000242135.1_Myro_odor_CIP_101113_V1/ na na na haploid bacteria 4138659 4092291 34.000000 0 3 59 NCBI RefSeq GCF_000242135.1-RS_2025_12_19 2025-12-19 3683 3556 84 na GCF_000242235.1 PRJNA224116 SAMN02463871 AGEL00000000.1 reference genome 796942 796942 Stomatobaculum longum strain=ACC2 na latest Scaffold Major Full 2012-01-11 Lach_bact_ACC2_V1 Broad Institute GCA_000242235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/235/GCF_000242235.1_Lach_bact_ACC2_V1/ na assembly from type material na haploid bacteria 2313632 2308581 55.000000 0 5 16 NCBI RefSeq GCF_000242235.1-RS_2025_12_13 2025-12-13 2178 2059 77 na GCF_000242255.2 PRJNA224116 SAMN02261415 na reference genome 767434 81475 Frateuria aurantia DSM 6220 strain=DSM 6220 na latest Complete Genome Major Full 2012-03-02 ASM24225v3 JGI GCA_000242255.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/255/GCF_000242255.2_ASM24225v3/ na assembly from type material na haploid bacteria 3603458 3603458 63.500000 1 1 1 NCBI RefSeq GCF_000242255.2-RS_2026_05_13 2026-05-13 3275 3140 90 na GCF_000242275.1 PRJNA224116 SAMN02299436 AGRJ00000000.1 na 797516 481722 Lentilactobacillus kisonensis F0435 strain=F0435 na latest Scaffold Major Full 2012-01-11 ASM24227v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000242275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/275/GCF_000242275.1_ASM24227v1/ na na na haploid bacteria 2987059 2970276 41.500000 0 86 285 NCBI RefSeq GCF_000242275.1-RS_2025_09_10 2025-09-10 2930 2663 52 na GCF_000242295.1 PRJNA224116 SAMN02299433 AGRK00000000.1 na 762965 762964 Haemophilus sp. oral taxon 851 str. F0397 strain=F0397 na latest Scaffold Major Full 2012-01-11 ASM24229v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000242295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/295/GCF_000242295.1_ASM24229v1/ na na na haploid bacteria 1838618 1837573 38.500000 0 21 37 NCBI RefSeq GCF_000242295.1-RS_2024_07_21 2024-07-21 1805 1708 55 na GCF_000242335.1 PRJNA224116 SAMN02232045 na reference genome 908937 52227 Prevotella dentalis DSM 3688 strain=DSM 3688 na latest Complete Genome Major Full 2012-12-27 ASM24233v3 DOE Joint Genome Institute GCA_000242335.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/335/GCF_000242335.1_ASM24233v3/ na assembly from type material na haploid bacteria 3350206 3350206 56.000000 4 4 4 NCBI RefSeq GCF_000242335.1-RS_2025_12_10 2025-12-10 2655 2517 78 na GCF_000242355.1 PRJNA224116 SAMN02471299 AHJJ00000000.1 na 1125976 1496 Clostridioides difficile CD37 strain=CD37 na latest Contig Major Full 2012-01-11 ASM24235v2 UCL Eastman Dental Institute GCA_000242355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/355/GCF_000242355.1_ASM24235v2/ na na na haploid bacteria 4010233 4010233 28.500000 0 245 245 NCBI RefSeq GCF_000242355.1-RS_2026_03_04 2026-03-04 3742 3639 25 22461557 GCF_000242375.1 PRJNA224116 SAMN00113350 AEIO00000000.1 na 885273 197 Campylobacter jejuni subsp. jejuni P110B strain=P110B na latest Contig Major Full 2012-01-11 ASM24237v2 Institute of Veterinary, Animal and Biomedical Sciences, Massey University GCA_000242375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/375/GCF_000242375.1_ASM24237v2/ na na na haploid bacteria 1656341 1656341 30.500000 0 29 29 NCBI RefSeq GCF_000242375.1-RS_2025_05_22 2025-05-22 1717 1592 56 22096527 GCF_000242395.1 PRJNA224116 SAMN00113351 AEIP00000000.1 na 885274 197 Campylobacter jejuni subsp. jejuni H22082 strain=H22082 na latest Contig Major Full 2012-01-11 ASM24239v2 Institute of Veterinary, Animal and Biomedical Sciences, Massey University GCA_000242395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/395/GCF_000242395.1_ASM24239v2/ na na na haploid bacteria 1659123 1659123 30.500000 0 28 28 NCBI RefSeq GCF_000242395.1-RS_2025_05_21 2025-05-21 1724 1596 56 22096527 GCF_000242415.2 PRJNA224116 SAMEA2272221 CAGB00000000.1 na 1116230 955 Wolbachia pipientis wAlbB strain=wAlbB na latest Contig Major Full 2012-01-11 ASM24241v3 CEA/IG-Genoscope GCA_000242415.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/415/GCF_000242415.2_ASM24241v3/ na na na haploid bacteria 1162431 1162431 34.000000 0 156 156 NCBI RefSeq GCF_000242415.2-RS_2026_01_08 2026-01-08 1137 1027 41 na GCF_000242435.1 PRJNA224116 SAMN02463860 ADLT00000000.1 na 742743 487173 Dialister succinatiphilus YIT 11850 strain=YIT 11850 na latest Scaffold Major Full 2012-01-19 Dial_succ_YIT_11850_V1 Broad Institute GCA_000242435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/435/GCF_000242435.1_Dial_succ_YIT_11850_V1/ na assembly from type material na haploid bacteria 2499879 2457811 50.500000 0 14 98 NCBI RefSeq GCF_000242435.1-RS_2026_02_14 2026-02-14 2127 2046 68 na GCF_000242455.2 PRJNA224116 SAMN02232051 na reference genome 886293 466153 Singulisphaera acidiphila DSM 18658 strain=DSM 18658 na latest Complete Genome Major Full 2012-12-17 ASM24245v3 DOE Joint Genome Institute GCA_000242455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/455/GCF_000242455.2_ASM24245v3/ na assembly from type material na haploid bacteria 9755686 9755686 62.000000 4 4 4 NCBI RefSeq GCF_000242455.2-RS_2025_11_20 2025-11-20 7378 7167 99 na GCF_000242475.1 PRJNA224116 SAMN00116884 AHJV00000000.1 na 904743 1280 Staphylococcus aureus subsp. aureus 21252 strain=21252 na latest Contig Major Full 2012-01-12 ASM24247v2 J. Craig Venter Institute GCA_000242475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/475/GCF_000242475.1_ASM24247v2/ na na na haploid bacteria 2777170 2777170 33.000000 0 57 57 NCBI RefSeq GCF_000242475.1-RS_2025_08_18 2025-08-18 2790 2642 65 na GCF_000242495.1 PRJNA224116 SAMN00116870 AHJW00000000.1 na 904745 1280 Staphylococcus aureus subsp. aureus 21262 strain=21262 na latest Contig Major Full 2012-01-12 ASM24249v2 J. Craig Venter Institute GCA_000242495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/495/GCF_000242495.1_ASM24249v2/ na na na haploid bacteria 2783499 2783499 32.500000 0 66 66 NCBI RefSeq GCF_000242495.1-RS_2025_08_17 2025-08-17 2817 2662 62 na GCF_000242515.1 PRJNA224116 SAMN00116893 AHJX00000000.1 na 904746 1280 Staphylococcus aureus subsp. aureus 21264 strain=21264 na latest Contig Major Full 2012-01-12 ASM24251v2 J. Craig Venter Institute GCA_000242515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/515/GCF_000242515.1_ASM24251v2/ na na na haploid bacteria 2843563 2843563 32.500000 0 56 56 NCBI RefSeq GCF_000242515.1-RS_2025_08_18 2025-08-18 2883 2709 65 na GCF_000242535.1 PRJNA224116 SAMN00116882 AHJY00000000.1 na 904750 1280 Staphylococcus aureus subsp. aureus 21272 strain=21272 na latest Contig Major Full 2012-01-12 ASM24253v2 J. Craig Venter Institute GCA_000242535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/535/GCF_000242535.1_ASM24253v2/ na na na haploid bacteria 2755879 2755879 32.500000 0 35 35 NCBI RefSeq GCF_000242535.1-RS_2025_08_17 2025-08-17 2754 2634 58 na GCF_000242555.1 PRJNA224116 SAMN00117448 AHJZ00000000.1 na 904754 1280 Staphylococcus aureus subsp. aureus 21283 strain=21283 na latest Contig Major Full 2012-01-12 ASM24255v2 J. Craig Venter Institute GCA_000242555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/555/GCF_000242555.1_ASM24255v2/ na na na haploid bacteria 2823252 2823252 32.500000 0 120 120 NCBI RefSeq GCF_000242555.1-RS_2025_08_17 2025-08-17 2899 2768 48 na GCF_000242575.1 PRJNA224116 SAMN00116858 AHKA00000000.1 na 904767 1280 Staphylococcus aureus subsp. aureus 21333 strain=21333 na latest Contig Major Full 2012-01-12 ASM24257v2 J. Craig Venter Institute GCA_000242575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/575/GCF_000242575.1_ASM24257v2/ na na na haploid bacteria 2791149 2791149 32.500000 0 50 50 NCBI RefSeq GCF_000242575.1-RS_2025_08_18 2025-08-18 2800 2647 68 na GCF_000242595.2 PRJNA224116 SAMN02232053 na reference genome 889378 46355 Spirochaeta africana DSM 8902 strain=DSM 8902 na latest Complete Genome Major Full 2012-04-02 ASM24259v3 DOE Joint Genome Institute GCA_000242595.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/595/GCF_000242595.2_ASM24259v3/ na assembly from type material na haploid bacteria 3285855 3285855 58.000000 1 1 1 NCBI RefSeq GCF_000242595.2-RS_2026_05_01 2026-05-01 2871 2803 58 na GCF_000242615.2 PRJNA224116 SAMN02256516 AGSB00000000.2 reference genome 903818 35839 Holophaga foetida DSM 6591 strain=DSM 6591 na latest Scaffold Major Full 2014-01-16 ASM24261v3 DOE Joint Genome Institute GCA_000242615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/615/GCF_000242615.2_ASM24261v3/ na assembly from type material na haploid bacteria 4127237 4123637 63.000000 0 3 39 NCBI RefSeq GCF_000242615.2-RS_2026_04_23 2026-04-23 3652 3545 57 22768361 GCF_000242635.2 PRJNA224116 SAMN02232052 na reference genome 929556 995 Solitalea canadensis DSM 3403 strain=DSM 3403 na latest Complete Genome Major Full 2012-03-08 ASM24263v3 DOE Joint Genome Institute GCA_000242635.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/635/GCF_000242635.2_ASM24263v3/ na assembly from type material na haploid bacteria 5202069 5202069 37.500000 1 1 1 NCBI RefSeq GCF_000242635.2-RS_2025_12_10 2025-12-10 4481 4381 75 na GCF_000242655.1 PRJNA224116 SAMN02470163 AHHC00000000.1 na 1125977 1125977 Pseudomonas sp. PAMC 25886 strain=PAMC 25886 na latest Contig Major Full 2012-01-12 ASM24265v2 Korea Polar Research Institute GCA_000242655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/655/GCF_000242655.1_ASM24265v2/ na na na haploid bacteria 7021839 7021839 61.000000 0 95 95 NCBI RefSeq GCF_000242655.1-RS_2025_08_27 2025-08-27 6450 6307 78 22408245 GCF_000242715.1 PRJNA224116 SAMN02471769 AHBF00000000.1 na 1116232 42234 Streptomyces acidiscabies 84-104 strain=84-104 na latest Contig Major Full 2012-01-13 ASM24271v2 University of Florida GCA_000242715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/715/GCF_000242715.1_ASM24271v2/ na na na haploid bacteria 11005945 11005945 70.500000 0 244 244 NCBI RefSeq GCF_000242715.1-RS_2026_02_06 2026-02-06 9991 9550 111 22408247 GCF_000242735.1 PRJNA224116 SAMN02471928 AGRQ00000000.1 na 1055328 487 Neisseria meningitidis NM233 strain=NM233 na latest Contig Major Full 2012-01-13 ASM24273v2 University of Pittsburgh School of Medicine GCA_000242735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/735/GCF_000242735.1_ASM24273v2/ na na na haploid bacteria 2004707 2004707 52.000000 0 314 314 NCBI RefSeq GCF_000242735.1-RS_2026_07_01 2026-07-01 2068 1865 57 22558202 GCF_000242755.1 PRJNA224116 SAMN02471929 AGRR00000000.1 na 1053687 487 Neisseria meningitidis NM220 strain=NM220 na latest Contig Major Full 2012-01-13 ASM24275v2 University of Pittsburgh School of Medicine GCA_000242755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/755/GCF_000242755.1_ASM24275v2/ na na na haploid bacteria 2017695 2017695 52.000000 0 339 339 NCBI RefSeq GCF_000242755.1-RS_2025_04_20 2025-04-20 2101 1884 58 22558202 GCF_000242775.1 PRJNA224116 SAMN02603073 na na 698969 1717 Corynebacterium diphtheriae HC03 strain=HC03 na latest Complete Genome Major Full 2012-01-13 ASM24277v1 Center for Biotechnology, Bielefeld University GCA_000242775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/775/GCF_000242775.1_ASM24277v1/ na na na haploid bacteria 2478364 2478364 53.500000 1 1 1 NCBI RefSeq GCF_000242775.1-RS_2026_04_01 2026-04-01 2349 2211 67 22505676 GCF_000242795.1 PRJNA224116 SAMN00754308 AHIK00000000.1 na 882868 28901 Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008286 strain=IA_2010008286 na latest Contig Major Full 2012-01-13 ASM24279v2 FDA GCA_000242795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/795/GCF_000242795.1_ASM24279v2/ na na na haploid bacteria 4652992 4652992 52.000000 0 38 38 NCBI RefSeq GCF_000242795.1-RS_2025_07_13 2025-07-13 4546 4275 96 na GCF_000242835.1 PRJNA224116 SAMN02470169 AHHA00000000.1 na 1112216 1112216 Sphingomonas sp. PAMC 26617 strain=PAMC 26617 na latest Scaffold Major Full 2012-01-20 ASM24283v1 korea Polar Research Institute GCA_000242835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/835/GCF_000242835.1_ASM24283v1/ na na na haploid bacteria 4760413 4663101 65.500000 0 10 70 NCBI RefSeq GCF_000242835.1-RS_2025_08_25 2025-08-25 4404 4283 49 22582371 GCF_000242855.2 PRJNA224116 SAMN02603349 na na 1091041 1390 Bacillus amyloliquefaciens IT-45 strain=IT-45 na latest Complete Genome Major Full 2013-02-13 ASM24285v2 Institut Rosell Lallemand, Inc. GCA_000242855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/855/GCF_000242855.2_ASM24285v2/ na na na haploid bacteria 3936866 3936866 46.500000 2 2 2 NCBI RefSeq GCF_000242855.2-RS_2025_01_30 2025-01-30 3947 3741 130 na GCF_000242875.2 PRJNA224116 SAMN00016669 AEXL00000000.2 reference genome 859350 1170320 Candidatus Nitrosopumilus salarius BD31 strain=BD31 na latest Contig Major Full 2012-05-09 ASM24287v3 Gordon and Betty Moore Foundation Marine Microbiology Initiative GCA_000242875.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/875/GCF_000242875.2_ASM24287v3/ na na na haploid archaea 1572957 1572957 34.000000 0 171 171 NCBI RefSeq GCF_000242875.2-RS_2026_05_13 2026-05-13 1980 1868 44 22461555 GCF_000242895.2 PRJNA224116 SAMN02598535 na na 666686 666686 Bacillus sp. 1NLA3E strain=1NLA3E na latest Complete Genome Major Full 2013-04-30 ASM24289v3 JGI GCA_000242895.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/895/GCF_000242895.2_ASM24289v3/ na na na haploid bacteria 4815602 4815602 38.000000 1 1 1 NCBI RefSeq GCF_000242895.2-RS_2025_08_25 2025-08-25 4727 4471 130 23833140 GCF_000242915.1 PRJNA224116 SAMN02470075 AFRZ00000000.1 reference genome 929558 1176482 Sulfurimonas gotlandica GD1 strain=GD1 na latest Complete Genome Major Full 2012-01-18 ASM24291v2 IOW-Leibniz Institute for Baltic Sea Research GCA_000242915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/915/GCF_000242915.1_ASM24291v2/ na assembly from type material na haploid bacteria 2952682 2952682 33.500000 1 1 1 NCBI RefSeq GCF_000242915.1-RS_2026_05_27 2026-05-27 2931 2846 64 22203982 GCF_000242975.1 PRJNA224116 SAMN02463936 AGEH00000000.1 na 999414 76859 Fusobacterium animalis F0419 strain=F0419 na latest Scaffold Major Full 2012-01-19 Fuso_nucl_OT_420_V1 Broad Institute GCA_000242975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/975/GCF_000242975.1_Fuso_nucl_OT_420_V1/ na na na haploid bacteria 2424697 2408755 27.000000 0 4 39 NCBI RefSeq GCF_000242975.1-RS_2026_04_15 2026-04-15 2340 2249 49 na GCF_000242995.2 PRJNA224116 SAMN02596750 AGWJ00000000.2 na 457404 861 Fusobacterium ulcerans 12-1B strain=12_1B na latest Scaffold Major Full 2013-06-21 Fusobacterium_sp_12_1B_V2 Broad Institute GCA_000242995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/242/995/GCF_000242995.2_Fusobacterium_sp_12_1B_V2/ na na na haploid bacteria 3726942 3677742 30.500000 0 8 38 NCBI RefSeq GCF_000242995.2-RS_2025_12_04 2025-12-04 3610 3495 71 na GCF_000243015.1 PRJNA224116 SAMN02463943 AGEK00000000.1 reference genome 999422 439703 Segatella maculosa OT 289 strain=OT 289 na latest Scaffold Major Full 2012-01-19 Prev_macu_OT_289_V1 Broad Institute GCA_000243015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/015/GCF_000243015.1_Prev_macu_OT_289_V1/ na na na haploid bacteria 3151214 3134147 47.500000 0 21 54 NCBI RefSeq GCF_000243015.1-RS_2025_11_27 2025-11-27 2487 2388 56 na GCF_000243035.1 PRJNA224116 SAMN02463881 AGWK00000000.1 reference genome 883158 189723 Prevotella micans F0438 strain=F0438 na latest Scaffold Major Full 2012-01-19 Prev_mica_F0438_V1 Broad Institute GCA_000243035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/035/GCF_000243035.1_Prev_mica_F0438_V1/ na na na haploid bacteria 2487950 2467372 45.500000 0 12 69 NCBI RefSeq GCF_000243035.1-RS_2025_12_11 2025-12-11 2005 1889 56 na GCF_000243075.1 PRJNA224116 SAMN02603427 na na 511062 511062 Oceanimonas sp. GK1 strain=GK1 na latest Complete Genome Major Full 2012-01-19 ASM24307v1 Iranian Biological Resource Center GCA_000243075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/075/GCF_000243075.1_ASM24307v1/ na na na haploid bacteria 3527244 3527244 61.000000 3 3 3 NCBI RefSeq GCF_000243075.1-RS_2024_08_22 2024-08-22 3355 3224 115 22461556 GCF_000243095.1 PRJNA224116 SAMN02469316 AHJE00000000.1 na 1127483 68895 Cupriavidus basilensis OR16 strain=OR16 na latest Contig Major Full 2012-01-19 ASM24309v2 BAYGEN GCA_000243095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/095/GCF_000243095.1_ASM24309v2/ na na na haploid bacteria 8546215 8546215 65.500000 0 416 416 NCBI RefSeq GCF_000243095.1-RS_2025_04_15 2025-04-15 8353 7155 70 22461549 GCF_000243115.2 PRJNA224116 SAMN02261390 na reference genome 929713 446683 Niabella soli DSM 19437 strain=DSM 19437 na latest Complete Genome Major Full 2014-01-03 ASM24311v3 JGI GCA_000243115.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/115/GCF_000243115.2_ASM24311v3/ na assembly from type material na haploid bacteria 4697343 4697343 45.000000 1 1 1 NCBI RefSeq GCF_000243115.2-RS_2025_11_21 2025-11-21 3846 3792 49 na GCF_000243135.2 PRJNA224116 SAMN02232012 na reference genome 871963 233055 Desulfitobacterium dichloroeliminans LMG P-21439 strain=LMG P-21439 na latest Complete Genome Major Full 2012-12-19 ASM24313v3 DOE Joint Genome Institute GCA_000243135.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/135/GCF_000243135.2_ASM24313v3/ na na na haploid bacteria 3624449 3624449 44.000000 1 1 1 NCBI RefSeq GCF_000243135.2-RS_2026_05_13 2026-05-13 3487 3349 94 29040502 GCF_000243155.2 PRJNA224116 SAMN02261389 na reference genome 756499 36854 Desulfitobacterium dehalogenans ATCC 51507 strain=ATCC 51507 na latest Complete Genome Major Full 2012-06-11 ASM24315v3 JGI GCA_000243155.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/155/GCF_000243155.2_ASM24315v3/ na assembly from type material na haploid bacteria 4321753 4321753 45.000000 1 1 1 NCBI RefSeq GCF_000243155.2-RS_2026_05_13 2026-05-13 4250 4104 97 25512312 GCF_000243175.1 PRJNA224116 SAMN02463856 ADLP00000000.1 na 742739 1502 Clostridium perfringens WAL-14572 strain=WAL-14572 na latest Scaffold Major Full 2012-01-23 Clos_perf_WAL_14572_V2 Broad Institute GCA_000243175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/175/GCF_000243175.1_Clos_perf_WAL_14572_V2/ na na na haploid bacteria 3466039 3462156 28.000000 0 20 35 NCBI RefSeq GCF_000243175.1-RS_2026_03_03 2026-03-03 3272 3089 131 na GCF_000243215.1 PRJNA224116 SAMN02463867 ADMC00000000.1 reference genome 742817 626933 Odoribacter laneus YIT 12061 strain=YIT 12061 na latest Scaffold Major Full 2012-01-23 Odor_lane_YIT_12061_V1 Broad Institute GCA_000243215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/215/GCF_000243215.1_Odor_lane_YIT_12061_V1/ na assembly from type material na haploid bacteria 3773011 3753461 40.500000 0 9 42 NCBI RefSeq GCF_000243215.1-RS_2025_12_11 2025-12-11 3121 3008 66 na GCF_000243235.1 PRJNA224116 SAMN02261365 AHKR00000000.1 reference genome 865937 195907 Gillisia limnaea DSM 15749 strain=DSM 15749 na latest Scaffold Major Full 2012-01-24 ASM24323v1 JGI GCA_000243235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/235/GCF_000243235.1_ASM24323v1/ na assembly from type material na haploid bacteria 3966857 3963630 37.500000 0 2 35 NCBI RefSeq GCF_000243235.1-RS_2026_05_01 2026-05-01 3527 3427 50 23450183 GCF_000243255.1 PRJNA224116 SAMN02261391 AHKP00000000.1 reference genome 937775 2315 Methanoplanus limicola DSM 2279 strain=DSM 2279 na latest Chromosome Major Full 2012-01-24 ASM24325v1 JGI GCA_000243255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/255/GCF_000243255.1_ASM24325v1/ na assembly from type material na haploid archaea 3200946 3200246 42.000000 1 1 8 NCBI RefSeq GCF_000243255.1-RS_2025_11_21 2025-11-21 3126 3032 65 na GCF_000243275.1 PRJNA224116 SAMN02256523 AHKQ00000000.1 na 929704 256 Myroides odoratus DSM 2801 strain=DSM 2801 na latest Chromosome Major Full 2012-01-24 ASM24327v1 DOE Joint Genome Institute GCA_000243275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/275/GCF_000243275.1_ASM24327v1/ na assembly from type material na haploid bacteria 4301842 4296542 36.000000 1 1 54 NCBI RefSeq GCF_000243275.1-RS_2025_12_03 2025-12-03 3863 3720 90 na GCF_000243315.1 PRJNA224116 SAMN02261413 AHKJ00000000.1 reference genome 671065 1111107 Metallosphaera yellowstonensis MK1 strain=MK1 na latest Scaffold Major Full 2012-01-23 ASM24331v1 JGI GCA_000243315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/315/GCF_000243315.1_ASM24331v1/ na na na haploid archaea 2817452 2807552 47.500000 0 21 120 NCBI RefSeq GCF_000243315.1-RS_2026_05_01 2026-05-01 3292 2833 53 na GCF_000243335.1 PRJNA224116 SAMN02256522 AHKT00000000.1 reference genome 929563 183 Leptonema illini DSM 21528 strain=DSM 21528 na latest Scaffold Major Full 2012-01-24 ASM24333v1 DOE Joint Genome Institute GCA_000243335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/335/GCF_000243335.1_ASM24333v1/ na assembly from type material na haploid bacteria 4522760 4521060 54.500000 0 3 20 NCBI RefSeq GCF_000243335.1-RS_2026_05_10 2026-05-10 4263 4171 48 na GCF_000243375.1 PRJNA79345 SAMEA2272433 na reference genome 4950 4950 Torulaspora delbrueckii strain=type strain:CBS 1146 na latest Chromosome Major Full 2011-12-08 ASM24337v1 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000243375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/375/GCF_000243375.1_ASM24337v1/ na assembly designated as neotype na haploid fungi 9220678 9218568 42.000000 8 8 34 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5174 4970 204 22123960 GCF_000243395.2 PRJNA224116 SAMN02441787 AGJI00000000.2 reference genome 928724 40990 Saccharomonospora glauca K62 strain=K62 na latest Chromosome Major Full 2012-04-18 ASM24339v3 JGI GCA_000243395.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/395/GCF_000243395.2_ASM24339v3/ na assembly from type material na haploid bacteria 4564108 4563208 69.000000 2 2 11 NCBI RefSeq GCF_000243395.2-RS_2025_12_13 2025-12-13 4363 4261 57 na GCF_000243415.2 PRJNA224116 SAMN02256521 AGJJ00000000.2 na 710687 75922 Mycolicibacterium tusciae JS617 strain=JS617 na latest Scaffold Major Full 2014-01-16 ASM24341v3 DOE Joint Genome Institute GCA_000243415.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/415/GCF_000243415.2_ASM24341v3/ na na na haploid bacteria 7306413 7306213 65.500000 0 4 6 NCBI RefSeq GCF_000243415.2-RS_2025_04_15 2025-04-15 7144 6840 57 na GCF_000243435.1 PRJNA224116 SAMN02261401 AGJK00000000.1 na 882800 408 Methylorubrum extorquens DSM 13060 strain=DSM 13060 na latest Contig Major Full 2012-01-23 ASM24343v2 JGI GCA_000243435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/435/GCF_000243435.1_ASM24343v2/ na na na haploid bacteria 6671206 6671206 68.500000 0 612 612 NCBI RefSeq GCF_000243435.1-RS_2026_04_29 2026-04-29 6780 6270 65 na GCF_000243455.1 PRJNA224116 SAMN02261372 AGJL00000000.1 na 647171 213185 Methanotorris formicicus Mc-S-70 strain=Mc-S-70 na latest Contig Major Full 2012-01-23 ASM24345v2 JGI GCA_000243455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/455/GCF_000243455.1_ASM24345v2/ na assembly from type material na haploid archaea 1818783 1818783 32.500000 0 121 121 NCBI RefSeq GCF_000243455.1-RS_2025_11_20 2025-11-20 2047 1919 43 na GCF_000243475.1 PRJNA224116 SAMN02261361 AGJM00000000.1 na 691164 28232 Geobacter metallireducens RCH3 strain=RCH3 na latest Contig Major Full 2012-01-23 ASM24347v2 JGI GCA_000243475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/475/GCF_000243475.1_ASM24347v2/ na na na haploid bacteria 3778796 3778796 60.000000 0 89 89 NCBI RefSeq GCF_000243475.1-RS_2025_11_24 2025-11-24 3518 3423 54 na GCF_000243515.1 PRJNA224116 SAMN02436505 AHME00000000.2 na 1049927 173 Leptospira interrogans serovar Pyrogenes str. 2006006960 strain=2006006960 na latest Contig Major Full 2012-11-05 gls454019v2.0 J. Craig Venter Institute GCA_000243515.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/515/GCF_000243515.1_gls454019v2.0/ na na na haploid bacteria 4875498 4875498 35.000000 0 71 71 NCBI RefSeq GCF_000243515.1-RS_2026_02_17 2026-02-17 4071 3792 42 na GCF_000243535.2 PRJNA224116 SAMN02436432 AHMF00000000.2 na 1049973 28182 Leptospira noguchii str. 1993005606 strain=1993005606 na latest Contig Major Full 2013-06-18 gls454021v02 J. Craig Venter Institute GCA_000243535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/535/GCF_000243535.2_gls454021v02/ na na na haploid bacteria 4970642 4970642 36.000000 0 141 141 NCBI RefSeq GCF_000243535.2-RS_2026_01_30 2026-01-30 4264 3756 44 na GCF_000243555.1 PRJNA224116 SAMN02436506 AHMG00000000.2 na 1049930 173 Leptospira interrogans str. 2002000623 strain=2002000623 na latest Contig Major Full 2012-11-02 Lint2002000623v2.0 J. Craig Venter Institute GCA_000243555.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/555/GCF_000243555.1_Lint2002000623v2.0/ na na na haploid bacteria 4928546 4928546 35.000000 0 73 73 NCBI RefSeq GCF_000243555.1-RS_2026_02_06 2026-02-06 4140 3853 44 na GCF_000243575.1 PRJNA224116 SAMN02436594 AHMH00000000.2 na 1049974 28182 Leptospira noguchii str. 2007001578 strain=2007001578 na latest Contig Major Full 2013-03-15 gls454035v02 J. Craig Venter Institute GCA_000243575.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/575/GCF_000243575.1_gls454035v02/ na na na haploid bacteria 4965419 4965419 35.500000 0 162 162 NCBI RefSeq GCF_000243575.1-RS_2026_02_15 2026-02-15 4262 3744 43 na GCF_000243615.1 PRJNA224116 SAMN02436368 AHMJ00000000.2 na 1049946 29507 Leptospira kirschneri serovar Grippotyphosa str. RM52 strain=RM52 na latest Contig Major Full 2012-08-13 gls454044v1.0 J. Craig Venter Institute GCA_000243615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/615/GCF_000243615.1_gls454044v1.0/ na na na haploid bacteria 4365006 4365006 36.000000 0 28 28 NCBI RefSeq GCF_000243615.1-RS_2025_07_15 2025-07-15 3650 3419 43 na GCF_000243635.1 PRJNA224116 SAMN02436433 AHMK00000000.2 na 1049924 173 Leptospira interrogans serovar Pomona str. Kennewicki LC82-25 strain=Kennewicki LC82-25 na latest Contig Major Full 2012-08-13 gls454045v1.0 J. Craig Venter Institute GCA_000243635.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/635/GCF_000243635.1_gls454045v1.0/ na na na haploid bacteria 4608327 4608327 35.000000 0 71 71 NCBI RefSeq GCF_000243635.1-RS_2026_02_15 2026-02-15 3850 3558 45 na GCF_000243655.2 PRJNA224116 SAMN02436369 AHML00000000.2 na 1049941 29507 Leptospira kirschneri serovar Bim str. 1051 strain=1051 na latest Contig Major Full 2013-03-15 gls454046v2.0 J. Craig Venter Institute GCA_000243655.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/655/GCF_000243655.2_gls454046v2.0/ na na na haploid bacteria 4399180 4399180 36.000000 0 36 36 NCBI RefSeq GCF_000243655.2-RS_2026_02_15 2026-02-15 3658 3454 44 na GCF_000243675.2 PRJNA224116 SAMN02436595 AHMM00000000.2 reference genome 1049790 29506 Leptospira inadai serovar Lyme str. 10 strain=10 na latest Contig Major Full 2013-08-07 gls454047v02 J. Craig Venter Institute GCA_000243675.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/675/GCF_000243675.2_gls454047v02/ na assembly from type material na haploid bacteria 4457871 4457871 44.500000 0 27 27 NCBI RefSeq GCF_000243675.2-RS_2026_03_21 2026-03-21 4004 3904 48 na GCF_000243695.2 PRJNA224116 SAMN02436434 AHMN00000000.2 reference genome 1049942 29507 Leptospira kirschneri serovar Cynopteri str. 3522 CT strain=3522 CT na latest Contig Major Full 2013-06-21 gls454049v02 J. Craig Venter Institute GCA_000243695.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/695/GCF_000243695.2_gls454049v02/ na assembly from type material na haploid bacteria 4409424 4409424 36.000000 0 24 24 NCBI RefSeq GCF_000243695.2-RS_2026_03_31 2026-03-31 3676 3409 43 na GCF_000243715.2 PRJNA224116 SAMN02436587 AHMO00000000.2 reference genome 1049789 301541 Leptospira broomii serovar Hurstbridge str. 5399 strain=5399 na latest Contig Major Full 2013-08-07 gls454050v02 J. Craig Venter Institute GCA_000243715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/715/GCF_000243715.2_gls454050v02/ na assembly from type material na haploid bacteria 4395904 4395904 43.000000 0 12 12 NCBI RefSeq GCF_000243715.2-RS_2025_12_13 2025-12-13 3968 3891 47 na GCF_000243735.2 PRJNA224116 SAMN02436507 AHMP00000000.2 na 1049970 408139 Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 strain=Bejo-Iso9 na latest Contig Major Full 2013-08-07 gls454052v1.0 J. Craig Venter Institute GCA_000243735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/735/GCF_000243735.2_gls454052v1.0/ na assembly from type material na haploid bacteria 4418431 4418431 45.000000 0 4 4 NCBI RefSeq GCF_000243735.2-RS_2026_04_23 2026-04-23 4044 3933 47 na GCF_000243755.2 PRJNA224116 SAMN02436508 AHMQ00000000.2 na 1049923 173 Leptospira interrogans serovar Muenchen str. Brem 129 strain=Brem 129 na latest Contig Major Full 2013-03-15 gls454053v2.0 J. Craig Venter Institute GCA_000243755.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/755/GCF_000243755.2_gls454053v2.0/ na na na haploid bacteria 4630975 4630975 35.000000 0 44 44 NCBI RefSeq GCF_000243755.2-RS_2026_02_15 2026-02-15 3858 3595 43 na GCF_000243775.1 PRJNA224116 SAMN02436370 AHMR00000000.2 na 1049786 174 Leptospira borgpetersenii str. Brem 307 strain=Brem 307 na latest Contig Major Full 2013-03-15 gls454055v02 J. Craig Venter Institute GCA_000243775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/775/GCF_000243775.1_gls454055v02/ na na na haploid bacteria 3829818 3829818 40.000000 0 140 140 NCBI RefSeq GCF_000243775.1-RS_2024_09_03 2024-09-03 3616 3113 43 na GCF_000243795.1 PRJNA224116 SAMN02436509 AHMS00000000.2 na 1049780 174 Leptospira borgpetersenii str. Brem 328 strain=Brem 328 na latest Contig Major Full 2013-03-15 gls454056v2.0 J. Craig Venter Institute GCA_000243795.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/795/GCF_000243795.1_gls454056v2.0/ na na na haploid bacteria 3833809 3833809 40.000000 0 49 49 NCBI RefSeq GCF_000243795.1-RS_2024_09_03 2024-09-03 3689 3279 42 na GCF_000243815.2 PRJNA224116 SAMN02436435 AHMT00000000.2 reference genome 1049759 100053 Leptospira alexanderi serovar Manhao 3 str. L 60 strain=L 60 na latest Contig Major Full 2013-08-07 gls454062v02 J. Craig Venter Institute GCA_000243815.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/815/GCF_000243815.2_gls454062v02/ na assembly from type material na haploid bacteria 4223825 4223825 40.000000 0 65 65 NCBI RefSeq GCF_000243815.2-RS_2026_04_23 2026-04-23 3949 3438 45 na GCF_000243835.1 PRJNA224116 SAMN02436499 AHMU00000000.2 na 1049976 28183 Leptospira santarosai serovar Arenal str. MAVJ 401 strain=MAVJ 401 na latest Contig Major Full 2013-03-15 gls454063v02 J. Craig Venter Institute GCA_000243835.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/835/GCF_000243835.1_gls454063v02/ na na na haploid bacteria 4245663 4245663 41.500000 0 87 87 NCBI RefSeq GCF_000243835.1-RS_2026_02_15 2026-02-15 4064 3739 44 na GCF_000243855.1 PRJNA224116 SAMN02436371 AHMV00000000.2 na 1049945 29507 Leptospira kirschneri serovar Grippotyphosa str. Moskva strain=Moskva na latest Contig Major Full 2012-11-05 LkirsMoskvav2.0 J. Craig Venter Institute GCA_000243855.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/855/GCF_000243855.1_LkirsMoskvav2.0/ na na na haploid bacteria 4335799 4335799 36.000000 0 31 31 NCBI RefSeq GCF_000243855.1-RS_2026_02_17 2026-02-17 3619 3368 42 na GCF_000243875.1 PRJNA224116 SAMN02436423 AHMW00000000.2 na 1049964 29507 Leptospira kirschneri serovar Sokoine str. RM1 strain=RM1 na latest Contig Major Full 2013-03-15 LkirsRM1v0.2 J. Craig Venter Institute GCA_000243875.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/875/GCF_000243875.1_LkirsRM1v0.2/ na na na haploid bacteria 4430104 4430104 36.000000 0 58 58 NCBI RefSeq GCF_000243875.1-RS_2026_02_15 2026-02-15 3709 3478 43 na GCF_000243895.1 PRJNA224116 SAMN02436424 AHMX00000000.2 na 1049931 173 Leptospira interrogans str. FPW2026 strain=FPW2026 na latest Contig Major Full 2012-08-13 LintFPW2026v1.0 J. Craig Venter Institute GCA_000243895.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/895/GCF_000243895.1_LintFPW2026v1.0/ na na na haploid bacteria 4880272 4880272 35.000000 0 93 93 NCBI RefSeq GCF_000243895.1-RS_2026_02_17 2026-02-17 4124 3850 42 na GCF_000243915.1 PRJNA224116 SAMN02436372 AHMY00000000.2 na 1049966 29507 Leptospira kirschneri str. H1 strain=H1 na latest Contig Major Full 2012-10-23 gls454081v2.0 J. Craig Venter Institute GCA_000243915.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/915/GCF_000243915.1_gls454081v2.0/ na na na haploid bacteria 4594734 4594734 36.000000 0 75 75 NCBI RefSeq GCF_000243915.1-RS_2026_02_17 2026-02-17 3909 3542 45 na GCF_000243955.2 PRJNA224116 SAMN02436373 AHNA00000000.2 na 1049920 173 Leptospira interrogans serovar Medanensis str. L0448 strain=L0448 na latest Contig Major Full 2013-03-15 LintL0448v0.2 J. Craig Venter Institute GCA_000243955.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/955/GCF_000243955.2_LintL0448v0.2/ na na na haploid bacteria 4950201 4950201 35.000000 0 81 81 NCBI RefSeq GCF_000243955.2-RS_2026_02_15 2026-02-15 4241 3949 43 na GCF_000243975.2 PRJNA224116 SAMN02436425 AHNB00000000.2 na 1049932 173 Leptospira interrogans str. L0996 strain=L0996 na latest Contig Major Full 2013-03-15 LintL0996v0.2 J. Craig Venter Institute GCA_000243975.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/975/GCF_000243975.2_LintL0996v0.2/ na na na haploid bacteria 4845034 4845034 35.000000 0 73 73 NCBI RefSeq GCF_000243975.2-RS_2026_02_15 2026-02-15 4168 3816 43 na GCF_000243995.1 PRJNA224116 SAMN02436426 AHNC00000000.2 na 1088541 28184 Leptospira weilii str. LNT 1234 strain=LNT 1234 na latest Contig Major Full 2013-03-15 gls454086v02 J. Craig Venter Institute GCA_000243995.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/995/GCF_000243995.1_gls454086v02/ na na na haploid bacteria 4263624 4263624 41.000000 0 83 83 NCBI RefSeq GCF_000243995.1-RS_2026_02_15 2026-02-15 3935 3636 45 na GCF_000244015.1 PRJNA224116 SAMN02436427 AHND00000000.2 na 1049804 173 Leptospira interrogans serovar Bataviae str. L1111 strain=L1111 na latest Contig Major Full 2012-11-05 gls454087v2.0 J. Craig Venter Institute GCA_000244015.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/015/GCF_000244015.1_gls454087v2.0/ na na na haploid bacteria 4853577 4853577 35.000000 0 82 82 NCBI RefSeq GCF_000244015.1-RS_2026_02_06 2026-02-06 4104 3794 44 na GCF_000244055.1 PRJNA224116 SAMN02436428 AHNF00000000.2 na 1049795 173 Leptospira interrogans serovar Autumnalis str. LP101 strain=LP101 na latest Contig Major Full 2013-03-15 gls454089v02 J. Craig Venter Institute GCA_000244055.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/055/GCF_000244055.1_gls454089v02/ na na na haploid bacteria 5030188 5030188 35.000000 0 127 127 NCBI RefSeq GCF_000244055.1-RS_2026_02_06 2026-02-06 4267 3953 45 na GCF_000244075.1 PRJNA224116 SAMN02436588 AHNG00000000.2 na 1049766 174 Leptospira borgpetersenii serovar Javanica str. MK146 strain=MK146 na latest Contig Major Full 2013-03-15 gls454090v2.0 J. Craig Venter Institute GCA_000244075.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/075/GCF_000244075.1_gls454090v2.0/ na na na haploid bacteria 3886371 3886371 40.000000 0 36 36 NCBI RefSeq GCF_000244075.1-RS_2026_01_30 2026-01-30 3434 3190 42 na GCF_000244095.1 PRJNA224116 SAMN02436589 AHNH00000000.2 na 1049929 173 Leptospira interrogans serovar Pyrogenes str. R168 strain=R168 na latest Contig Major Full 2013-03-15 gls454092v02 J. Craig Venter Institute GCA_000244095.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/095/GCF_000244095.1_gls454092v02/ na na na haploid bacteria 4868353 4868353 35.000000 0 99 99 NCBI RefSeq GCF_000244095.1-RS_2026_02_06 2026-02-06 4112 3854 45 na GCF_000244115.1 PRJNA224116 SAMN02436375 AHNI00000000.2 na 1049906 173 Leptospira interrogans serovar Hebdomadis str. R499 strain=R499 na latest Contig Major Full 2012-11-05 gls454096v2.0 J. Craig Venter Institute GCA_000244115.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/115/GCF_000244115.1_gls454096v2.0/ na na na haploid bacteria 4702752 4702752 35.000000 0 70 70 NCBI RefSeq GCF_000244115.1-RS_2026_02_17 2026-02-17 3973 3680 44 na GCF_000244135.1 PRJNA224116 SAMN02436429 AHNJ00000000.2 na 1049902 173 Leptospira interrogans serovar Grippotyphosa str. UI 08368 strain=UI 08368 na latest Contig Major Full 2012-11-05 gls454097v02 J. Craig Venter Institute GCA_000244135.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/135/GCF_000244135.1_gls454097v02/ na na na haploid bacteria 4871482 4871482 35.000000 0 78 78 NCBI RefSeq GCF_000244135.1-RS_2026_02_17 2026-02-17 4088 3864 44 na GCF_000244155.2 PRJNA224116 SAMN02436376 AHNK00000000.2 na 1049903 173 Leptospira interrogans serovar Grippotyphosa str. UI 08434 strain=UI 08434 na latest Contig Major Full 2013-03-15 LintUI08434v0.2 J. Craig Venter Institute GCA_000244155.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/155/GCF_000244155.2_LintUI08434v0.2/ na na na haploid bacteria 4741376 4741376 35.000000 0 60 60 NCBI RefSeq GCF_000244155.2-RS_2026_02_06 2026-02-06 3939 3694 43 na GCF_000244175.1 PRJNA224116 SAMN02436590 AHNL00000000.2 na 1049935 173 Leptospira interrogans str. UI 08452 strain=UI 08452 na latest Contig Major Full 2012-11-05 gls454099v02 J. Craig Venter Institute GCA_000244175.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/175/GCF_000244175.1_gls454099v02/ na na na haploid bacteria 4864825 4864825 35.000000 0 66 66 NCBI RefSeq GCF_000244175.1-RS_2026_02_15 2026-02-15 4149 3853 43 na GCF_000244215.1 PRJNA224116 SAMN02436500 AHNN00000000.2 na 1049782 174 Leptospira borgpetersenii str. UI 09149 strain=UI 09149 na latest Contig Major Full 2012-11-05 LborgUI09149v2.0 J. Craig Venter Institute GCA_000244215.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/215/GCF_000244215.1_LborgUI09149v2.0/ na na na haploid bacteria 3888658 3888658 40.000000 0 27 27 NCBI RefSeq GCF_000244215.1-RS_2026_01_30 2026-01-30 3428 3180 44 na GCF_000244235.2 PRJNA224116 SAMN02436377 AHNO00000000.2 na 1049936 173 Leptospira interrogans str. UI 09600 strain=UI 09600 na latest Contig Major Full 2013-03-15 gls454102v2.0 J. Craig Venter Institute GCA_000244235.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/235/GCF_000244235.2_gls454102v2.0/ na na na haploid bacteria 4716518 4716518 35.000000 0 55 55 NCBI RefSeq GCF_000244235.2-RS_2026_02_15 2026-02-15 3929 3664 42 na GCF_000244255.2 PRJNA224116 SAMN02436592 AHNP00000000.2 na 1049767 174 Leptospira borgpetersenii serovar Javanica str. UI 09931 strain=UI 09931 na latest Contig Major Full 2013-06-21 gls454103v02 J. Craig Venter Institute GCA_000244255.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/255/GCF_000244255.2_gls454103v02/ na na na haploid bacteria 3894772 3894772 40.000000 0 15 15 NCBI RefSeq GCF_000244255.2-RS_2026_01_30 2026-01-30 3432 3176 43 na GCF_000244275.1 PRJNA224116 SAMN02436582 AHNQ00000000.2 na 1049937 173 Leptospira interrogans str. UI 12621 strain=UI 12621 na latest Contig Major Full 2012-10-23 gls454104v2.0 J. Craig Venter Institute GCA_000244275.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/275/GCF_000244275.1_gls454104v2.0/ na na na haploid bacteria 4981617 4981617 35.000000 0 59 59 NCBI RefSeq GCF_000244275.1-RS_2026_02_06 2026-02-06 4181 3903 43 na GCF_000244295.1 PRJNA224116 SAMN02436378 AHNR00000000.2 na 1049938 173 Leptospira interrogans str. UI 12758 strain=UI 12758 na latest Contig Major Full 2012-11-05 gls454105v2.0 J. Craig Venter Institute GCA_000244295.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/295/GCF_000244295.1_gls454105v2.0/ na na na haploid bacteria 5102030 5102030 35.000000 0 83 83 NCBI RefSeq GCF_000244295.1-RS_2026_02_06 2026-02-06 4376 4117 43 na GCF_000244315.2 PRJNA224116 SAMN02436430 AHNS00000000.2 na 1049904 173 Leptospira interrogans serovar Grippotyphosa str. UI 12764 strain=UI 12764 na latest Contig Major Full 2013-03-15 LintUI12764v0.2 J. Craig Venter Institute GCA_000244315.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/315/GCF_000244315.2_LintUI12764v0.2/ na na na haploid bacteria 5077604 5077604 35.000000 0 73 73 NCBI RefSeq GCF_000244315.2-RS_2026_02_06 2026-02-06 4324 4052 43 na GCF_000244335.2 PRJNA224116 SAMN02436501 AHNT00000000.2 na 1049905 173 Leptospira interrogans serovar Grippotyphosa str. UI 12769 strain=UI 12769 na latest Contig Major Full 2013-03-15 gls454107v02 J. Craig Venter Institute GCA_000244335.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/335/GCF_000244335.2_gls454107v02/ na na na haploid bacteria 4900685 4900685 35.000000 0 94 94 NCBI RefSeq GCF_000244335.2-RS_2026_02_06 2026-02-06 4105 3867 42 na GCF_000244355.1 PRJNA224116 SAMN02436583 AHNU00000000.2 na 1088542 28184 Leptospira weilii str. UI 13098 strain=UI 13098 na latest Contig Major Full 2013-03-16 LweiUI13098v0.2 J. Craig Venter Institute GCA_000244355.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/355/GCF_000244355.1_LweiUI13098v0.2/ na na na haploid bacteria 4554081 4554081 40.500000 0 89 89 NCBI RefSeq GCF_000244355.1-RS_2026_02_15 2026-02-15 4267 3942 44 na GCF_000244375.2 PRJNA224116 SAMN02436416 AHNV00000000.2 na 1049939 173 Leptospira interrogans str. UI 13372 strain=UI 13372 na latest Contig Major Full 2013-03-16 LintUI13372v0.2 J. Craig Venter Institute GCA_000244375.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/375/GCF_000244375.2_LintUI13372v0.2/ na na na haploid bacteria 5096193 5096193 35.000000 0 283 283 NCBI RefSeq GCF_000244375.2-RS_2026_02_06 2026-02-06 4467 4089 43 na GCF_000244395.2 PRJNA224116 SAMN02436502 AHNW00000000.2 na 1049922 173 Leptospira interrogans serovar Medanensis str. UT053 strain=UT053 na latest Contig Major Full 2013-03-16 gls454110v02 J. Craig Venter Institute GCA_000244395.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/395/GCF_000244395.2_gls454110v02/ na na na haploid bacteria 5157642 5157642 35.000000 0 174 174 NCBI RefSeq GCF_000244395.2-RS_2026_04_04 2026-04-04 4504 4147 44 na GCF_000244415.1 PRJNA224116 SAMN02436379 AHNX00000000.2 na 1049925 173 Leptospira interrogans serovar Pomona str. UT364 strain=UT364 na latest Contig Major Full 2013-03-16 LintUT364v0.2 J. Craig Venter Institute GCA_000244415.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/415/GCF_000244415.1_LintUT364v0.2/ na na na haploid bacteria 5113459 5113459 35.000000 0 291 291 NCBI RefSeq GCF_000244415.1-RS_2025_08_05 2025-08-05 4434 4041 46 na GCF_000244475.1 PRJNA224116 SAMN02436584 AHOA00000000.2 na 1049977 28183 Leptospira santarosai str. 200702252 strain=200702252 na latest Contig Major Full 2013-03-16 gls454120v02 J. Craig Venter Institute GCA_000244475.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/475/GCF_000244475.1_gls454120v02/ na na na haploid bacteria 4031631 4031631 42.000000 0 39 39 NCBI RefSeq GCF_000244475.1-RS_2026_01_30 2026-01-30 3727 3504 45 na GCF_000244495.1 PRJNA224116 SAMN02436417 AHOB00000000.2 na 1049762 174 Leptospira borgpetersenii serovar Castellonis str. 200801910 strain=200801910 na latest Contig Major Full 2012-11-05 Lborg200801910v2.0 J. Craig Venter Institute GCA_000244495.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/495/GCF_000244495.1_Lborg200801910v2.0/ na na na haploid bacteria 3970478 3970478 40.000000 0 22 22 NCBI RefSeq GCF_000244495.1-RS_2026_01_30 2026-01-30 3505 3189 45 na GCF_000244515.1 PRJNA224116 SAMN02436380 AHOC00000000.2 na 1049968 29507 Leptospira kirschneri serovar Valbuzzi str. 200702274 strain=200702274 na latest Contig Major Full 2012-11-05 Lkirs200702274v2.0 J. Craig Venter Institute GCA_000244515.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/515/GCF_000244515.1_Lkirs200702274v2.0/ na na na haploid bacteria 4317431 4317431 36.000000 0 22 22 NCBI RefSeq GCF_000244515.1-RS_2026_04_23 2026-04-23 3605 3375 44 na GCF_000244555.1 PRJNA224116 SAMN02436503 AHOE00000000.2 na 1049978 28183 Leptospira santarosai str. CBC379 strain=CBC379 na latest Contig Major Full 2012-11-05 gls454163v02 J. Craig Venter Institute GCA_000244555.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/555/GCF_000244555.1_gls454163v02/ na na na haploid bacteria 4170210 4170210 41.500000 0 69 69 NCBI RefSeq GCF_000244555.1-RS_2025_07_15 2025-07-15 3981 3698 43 na GCF_000244575.1 PRJNA224116 SAMN02436504 AHOF00000000.2 na 1049979 28183 Leptospira santarosai str. CBC523 strain=CBC523 na latest Contig Major Full 2013-03-16 gls454165v2.0 J. Craig Venter Institute GCA_000244575.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/575/GCF_000244575.1_gls454165v2.0/ na na na haploid bacteria 4037660 4037660 42.000000 0 37 37 NCBI RefSeq GCF_000244575.1-RS_2026_01_30 2026-01-30 3785 3591 43 na GCF_000244595.2 PRJNA224116 SAMN02436381 AHOG00000000.2 na 1049819 173 Leptospira interrogans serovar Copenhageni str. HAI0188 strain=HAI0188 na latest Contig Major Full 2013-03-16 gls454167v02 J. Craig Venter Institute GCA_000244595.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/595/GCF_000244595.2_gls454167v02/ na na na haploid bacteria 4617362 4617362 35.000000 0 31 31 NCBI RefSeq GCF_000244595.2-RS_2026_02_15 2026-02-15 3807 3636 43 na GCF_000244615.1 PRJNA224116 SAMN02436418 AHOH00000000.2 na 1049980 28183 Leptospira santarosai str. HAI134 strain=HAI134 na latest Contig Major Full 2013-03-16 gls454168v2.0 J. Craig Venter Institute GCA_000244615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/615/GCF_000244615.1_gls454168v2.0/ na na na haploid bacteria 4056214 4056214 41.500000 0 48 48 NCBI RefSeq GCF_000244615.1-RS_2026_01_30 2026-01-30 3805 3541 42 na GCF_000244655.1 PRJNA224116 SAMN02436497 AHOJ00000000.2 na 1049982 28183 Leptospira santarosai str. HAI1380 strain=HAI1380 na latest Contig Major Full 2013-03-16 gls454171v2.0 J. Craig Venter Institute GCA_000244655.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/655/GCF_000244655.1_gls454171v2.0/ na na na haploid bacteria 3990385 3990385 42.000000 0 38 38 NCBI RefSeq GCF_000244655.1-RS_2026_01_30 2026-01-30 3697 3498 42 na GCF_000244675.1 PRJNA224116 SAMN02436585 AHOK00000000.2 na 1049983 28183 Leptospira santarosai str. HAI821 strain=HAI821 na latest Contig Major Full 2013-03-16 gls454175v2.0 J. Craig Venter Institute GCA_000244675.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/675/GCF_000244675.1_gls454175v2.0/ na na na haploid bacteria 3992158 3992158 41.500000 0 52 52 NCBI RefSeq GCF_000244675.1-RS_2026_01_30 2026-01-30 3664 3468 42 na GCF_000244695.2 PRJNA224116 SAMN02436498 AHOL00000000.2 na 1049934 173 Leptospira interrogans str. MMD3731 strain=MMD3731 na latest Contig Major Full 2013-03-16 gls454177v02 J. Craig Venter Institute GCA_000244695.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/695/GCF_000244695.2_gls454177v02/ na na na haploid bacteria 4591690 4591690 35.000000 0 38 38 NCBI RefSeq GCF_000244695.2-RS_2026_02_15 2026-02-15 3785 3617 43 na GCF_000244715.1 PRJNA224116 SAMN02436419 AHOM00000000.2 na 1049971 447106 Leptospira licerasiae str. MMD4847 strain=MMD4847 na latest Contig Major Full 2012-09-11 gls454178v1.0 J. Craig Venter Institute GCA_000244715.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/715/GCF_000244715.1_gls454178v1.0/ na na na haploid bacteria 4201335 4201335 41.000000 0 10 10 NCBI RefSeq GCF_000244715.1-RS_2026_02_15 2026-02-15 3889 3831 44 na GCF_000244735.1 PRJNA224116 SAMN02436420 AHON00000000.2 na 1049984 28183 Leptospira santarosai str. MOR084 strain=MOR084 na latest Contig Major Full 2012-10-23 gls454179v2.0 J. Craig Venter Institute GCA_000244735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/735/GCF_000244735.1_gls454179v2.0/ na na na haploid bacteria 4139620 4139620 41.500000 0 90 90 NCBI RefSeq GCF_000244735.1-RS_2026_02_17 2026-02-17 3880 3611 42 na GCF_000244755.1 PRJNA224116 SAMN02436421 AHOO00000000.2 na 1049972 447106 Leptospira licerasiae serovar Varillal str. VAR 010 strain=VAR 010 na latest Contig Major Full 2012-04-12 ASM24475v3 J. Craig Venter Institute GCA_000244755.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/755/GCF_000244755.1_ASM24475v3/ na assembly from type material na haploid bacteria 4211147 4211147 41.000000 0 14 14 NCBI RefSeq GCF_000244755.1-RS_2026_03_31 2026-03-31 3904 3839 45 23145189 GCF_000244775.1 PRJNA224116 SAMN02436382 AHOP00000000.2 na 1085540 28182 Leptospira noguchii serovar Autumnalis str. ZUN142 strain=ZUN142 na latest Contig Major Full 2013-03-16 gls454186v02 J. Craig Venter Institute GCA_000244775.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/775/GCF_000244775.1_gls454186v02/ na na na haploid bacteria 4844090 4844090 35.500000 0 68 68 NCBI RefSeq GCF_000244775.1-RS_2025_08_25 2025-08-25 4034 3701 44 na GCF_000244795.1 PRJNA224116 SAMN02436422 AHOQ00000000.2 na 1049985 28183 Leptospira santarosai str. ZUN179 strain=ZUN179 na latest Contig Major Full 2013-03-16 gls454187v02 J. Craig Venter Institute GCA_000244795.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/795/GCF_000244795.1_gls454187v02/ na na na haploid bacteria 4072579 4072579 41.500000 0 55 55 NCBI RefSeq GCF_000244795.1-RS_2026_01_30 2026-01-30 3818 3587 43 na GCF_000244835.1 PRJNA224116 SAMN02436414 AHOS00000000.2 na 1049776 174 Leptospira borgpetersenii serovar Mini str. 201000851 strain=201000851 na latest Contig Major Full 2013-04-15 gls454191v02 J. Craig Venter Institute GCA_000244835.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/835/GCF_000244835.1_gls454191v02/ na na na haploid bacteria 3973764 3973764 40.000000 0 41 41 NCBI RefSeq GCF_000244835.1-RS_2026_01_30 2026-01-30 3553 3285 44 na GCF_000244875.1 PRJNA224116 SAMN02261430 na na 755731 755731 Clostridium sp. BNL1100 strain=BNL1100 na latest Complete Genome Major Full 2012-01-25 ASM24487v1 JGI GCA_000244875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/875/GCF_000244875.1_ASM24487v1/ na na na haploid bacteria 4613747 4613747 37.500000 1 1 1 NCBI RefSeq GCF_000244875.1-RS_2024_05_28 2024-05-28 4086 3955 89 23209234 GCF_000244895.1 PRJNA224116 SAMN02261386 AHLV00000000.1 reference genome 768710 339862 Desulfosporosinus youngiae DSM 17734 strain=DSM 17734 na latest Chromosome Major Full 2012-02-01 ASM24489v1 JGI GCA_000244895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/895/GCF_000244895.1_ASM24489v1/ na assembly from type material na haploid bacteria 5660978 5660678 44.000000 1 1 4 NCBI RefSeq GCF_000244895.1-RS_2026_05_13 2026-05-13 5416 5206 112 na GCF_000244915.1 PRJNA224116 SAMN02261395 AHLW00000000.1 na 319017 319017 Bradyrhizobium sp. WSM471 strain=WSM471 na latest Chromosome Major Full 2012-02-01 ASM24491v1 JGI GCA_000244915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/915/GCF_000244915.1_ASM24491v1/ na na na haploid bacteria 7784016 7783916 63.500000 1 1 2 NCBI RefSeq GCF_000244915.1-RS_2024_08_22 2024-08-22 7332 7104 54 na GCF_000244935.1 PRJNA224116 SAMN02261403 AHMB00000000.1 na 319003 319003 Bradyrhizobium sp. WSM1253 strain=WSM1253 na latest Scaffold Major Full 2012-05-01 ASM24493v1 JGI GCA_000244935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/935/GCF_000244935.1_ASM24493v1/ na na na haploid bacteria 8719808 8712908 63.000000 0 2 71 NCBI RefSeq GCF_000244935.1-RS_2024_08_22 2024-08-22 8283 8001 55 26629308 GCF_000244955.1 PRJNA224116 SAMN02261396 AHLX00000000.1 reference genome 882083 632569 Saccharomonospora marina XMU15 strain=XMU15 na latest Chromosome Major Full 2012-02-03 ASM24495v1 JGI GCA_000244955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/955/GCF_000244955.1_ASM24495v1/ na assembly from type material na haploid bacteria 5965593 5964893 69.000000 1 1 8 NCBI RefSeq GCF_000244955.1-RS_2025_12_13 2025-12-13 5776 5638 60 22768369 GCF_000244975.1 PRJNA224116 SAMN02256534 AHLY00000000.1 reference genome 882082 40989 Saccharomonospora cyanea NA-134 strain=NA-134 na latest Chromosome Major Full 2012-02-03 ASM24497v1 DOE Joint Genome Institute GCA_000244975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/244/975/GCF_000244975.1_ASM24497v1/ na assembly from type material na haploid bacteria 5408301 5407901 69.500000 1 1 5 NCBI RefSeq GCF_000244975.1-RS_2025_12_13 2025-12-13 5193 5085 60 na GCF_000245015.1 PRJNA224116 SAMN02261399 AHMA00000000.1 reference genome 395493 1022 Beggiatoa alba B18LD strain=B18LD na latest Scaffold Major Full 2012-05-04 ASM24501v1 JGI GCA_000245015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/015/GCF_000245015.1_ASM24501v1/ na assembly from type material na haploid bacteria 4265146 4263346 40.500000 0 3 21 NCBI RefSeq GCF_000245015.1-RS_2025_12_13 2025-12-13 3569 3497 53 na GCF_000245035.1 PRJNA224116 SAMN02435808 AFSG00000000.1 na 1051503 96241 Bacillus spizizenii DV1-B-1 strain=DV1-B-1 na latest Contig Major Full 2012-01-25 ASM24503v2 Institute for Genome Sciences GCA_000245035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/035/GCF_000245035.1_ASM24503v2/ na na na haploid bacteria 3974551 3974551 43.500000 0 20 20 NCBI RefSeq GCF_000245035.1-RS_2026_03_06 2026-03-06 4151 3780 106 22493193 GCF_000245095.1 PRJNA224116 SAMN02471813 AHJK00000000.1 na 1132497 43080 Saccharolobus islandicus M.16.2 strain=M.16.2 na latest Complete Genome Major Full 2012-01-25 ASM24509v2 University of Illinois GCA_000245095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/095/GCF_000245095.1_ASM24509v2/ na na na haploid archaea 2645252 2645252 35.000000 1 1 1 NCBI RefSeq GCF_000245095.1-RS_2025_12_22 2025-12-22 2932 2602 51 22363207 GCF_000245115.1 PRJNA224116 SAMN02471807 AHJL00000000.1 na 1132498 43080 Saccharolobus islandicus M.16.12 strain=M.16.12 na latest Contig Major Full 2012-01-25 ASM24511v2 University of Illinois GCA_000245115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/115/GCF_000245115.1_ASM24511v2/ na na na haploid archaea 2680814 2680814 35.000000 0 5 5 NCBI RefSeq GCF_000245115.1-RS_2025_12_22 2025-12-22 3007 2638 52 22363207 GCF_000245135.1 PRJNA224116 SAMN02471814 AHJM00000000.1 na 1132499 43080 Saccharolobus islandicus M.16.13 strain=M.16.13 na latest Contig Major Full 2012-01-25 ASM24513v2 University of Illinois GCA_000245135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/135/GCF_000245135.1_ASM24513v2/ na na na haploid archaea 2635815 2635815 35.000000 0 3 3 NCBI RefSeq GCF_000245135.1-RS_2025_12_22 2025-12-22 2913 2599 51 22363207 GCF_000245155.1 PRJNA224116 SAMN02471818 AHJN00000000.1 na 1132500 43080 Saccharolobus islandicus M.16.22 strain=M.16.22 na latest Contig Major Full 2012-01-25 ASM24515v2 University of Illinois GCA_000245155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/155/GCF_000245155.1_ASM24515v2/ na na na haploid archaea 2680985 2680985 35.000000 0 3 3 NCBI RefSeq GCF_000245155.1-RS_2025_12_22 2025-12-22 3007 2613 52 22363207 GCF_000245175.1 PRJNA224116 SAMN02471819 AHJO00000000.1 na 1132501 43080 Saccharolobus islandicus M.16.23 strain=M.16.23 na latest Complete Genome Major Full 2012-01-25 ASM24517v2 University of Illinois GCA_000245175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/175/GCF_000245175.1_ASM24517v2/ na na na haploid archaea 2601131 2601131 35.000000 1 1 1 NCBI RefSeq GCF_000245175.1-RS_2025_12_22 2025-12-22 2886 2605 51 22363207 GCF_000245195.1 PRJNA224116 SAMN02471824 AHJP00000000.1 na 1132502 43080 Saccharolobus islandicus M.16.30 strain=M.16.30 na latest Contig Major Full 2012-01-25 ASM24519v2 University of Illinois GCA_000245195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/195/GCF_000245195.1_ASM24519v2/ na na na haploid archaea 2608312 2608312 35.000000 0 4 4 NCBI RefSeq GCF_000245195.1-RS_2025_12_22 2025-12-22 2899 2605 51 22363207 GCF_000245215.1 PRJNA224116 SAMN02471808 AHJQ00000000.1 na 1132503 43080 Saccharolobus islandicus M.16.40 strain=M.16.40 na latest Complete Genome Major Full 2012-01-25 ASM24521v2 University of Illinois GCA_000245215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/215/GCF_000245215.1_ASM24521v2/ na na na haploid archaea 2664783 2664783 35.000000 1 1 1 NCBI RefSeq GCF_000245215.1-RS_2025_12_22 2025-12-22 2974 2643 52 22363207 GCF_000245235.1 PRJNA224116 SAMN02471809 AHJR00000000.1 na 1132504 43080 Saccharolobus islandicus M.16.43 strain=M.16.43 na latest Complete Genome Major Full 2012-01-25 ASM24523v2 University of Illinois GCA_000245235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/235/GCF_000245235.1_ASM24523v2/ na na na haploid archaea 2589840 2589840 35.000000 1 1 1 NCBI RefSeq GCF_000245235.1-RS_2025_12_22 2025-12-22 2893 2614 52 22363207 GCF_000245255.1 PRJNA224116 SAMN02471810 AHJS00000000.1 na 1132505 43080 Saccharolobus islandicus M.16.46 strain=M.16.46 na latest Contig Major Full 2012-01-25 ASM24525v2 University of Illinois GCA_000245255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/255/GCF_000245255.1_ASM24525v2/ na na na haploid archaea 2694762 2694762 35.000000 0 2 2 NCBI RefSeq GCF_000245255.1-RS_2025_12_22 2025-12-22 2979 2598 52 22363207 GCF_000245275.1 PRJNA224116 SAMN02471811 AHJT00000000.1 na 1132506 43080 Saccharolobus islandicus M.16.47 strain=M.16.47 na latest Complete Genome Major Full 2012-01-25 ASM24527v2 University of Illinois GCA_000245275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/275/GCF_000245275.1_ASM24527v2/ na na na haploid archaea 2637559 2637559 35.000000 1 1 1 NCBI RefSeq GCF_000245275.1-RS_2025_12_22 2025-12-22 2931 2568 51 22363207 GCF_000245295.1 PRJNA224116 SAMN00000705 AFSF00000000.1 na 565143 1423 Bacillus subtilis subsp. subtilis str. AUSI98 strain=AUSI98 na latest Scaffold Major Full 2012-01-25 ASM24529v1 University of Maryland Institute for Genome Sciences GCA_000245295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/295/GCF_000245295.1_ASM24529v1/ na na na haploid bacteria 4353151 4353051 43.500000 0 123 128 NCBI RefSeq GCF_000245295.1-RS_2025_06_29 2025-06-29 4691 4385 126 22493193 GCF_000245395.1 PRJNA224116 SAMN02471731 AGNN00000000.1 na 1094175 317 Pseudomonas syringae pv. theae NCPPB 2598 strain=NCPPB 2598 na latest Scaffold Major Full 2012-02-02 ASM24539v1 University of Exeter GCA_000245395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/395/GCF_000245395.1_ASM24539v1/ na na na haploid bacteria 6653895 6315169 58.500000 0 216 1603 NCBI RefSeq GCF_000245395.1-RS_2025_02_17 2025-02-17 6717 6130 52 na GCF_000245415.1 PRJNA224116 SAMN02471738 AGNO00000000.1 na 1094176 317 Pseudomonas syringae pv. actinidiae CFBP 7286 strain=CFBP 7286 na latest Scaffold Major Full 2012-02-02 ASM24541v1 University of Exeter GCA_000245415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/415/GCF_000245415.1_ASM24541v1/ na na na haploid bacteria 6139481 6124586 58.500000 0 351 462 NCBI RefSeq GCF_000245415.1-RS_2025_07_15 2025-07-15 5714 5343 55 na GCF_000245435.1 PRJNA224116 SAMN02471723 AGNP00000000.1 na 1094177 317 Pseudomonas syringae pv. actinidiae KW41 strain=KW41 na latest Scaffold Major Full 2012-02-02 ASM24543v1 University of Exeter GCA_000245435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/435/GCF_000245435.1_ASM24543v1/ na na na haploid bacteria 5921835 5887867 59.000000 0 428 662 NCBI RefSeq GCF_000245435.1-RS_2025_07_15 2025-07-15 5595 5165 65 na GCF_000245455.1 PRJNA224116 SAMN02471732 AGNQ00000000.1 na 1094178 317 Pseudomonas syringae pv. actinidiae PA459 strain=PA459 na latest Scaffold Major Full 2012-02-02 ASM24545v1 University of Exeter GCA_000245455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/455/GCF_000245455.1_ASM24545v1/ na na na haploid bacteria 6461320 6415594 58.500000 0 390 730 NCBI RefSeq GCF_000245455.1-RS_2025_07_15 2025-07-15 6215 5747 57 na GCF_000245475.1 PRJNA224116 SAMN02471733 AGUH00000000.1 na 1108968 317 Pseudomonas syringae pv. actinidiae CH2010-6 strain=CH2010-6 na latest Scaffold Major Full 2012-02-02 ASM24547v1 University of Exeter GCA_000245475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/475/GCF_000245475.1_ASM24547v1/ na na na haploid bacteria 6196569 6166361 58.500000 0 342 563 NCBI RefSeq GCF_000245475.1-RS_2025_07_15 2025-07-15 5801 5376 56 na GCF_000245495.1 PRJNA224116 SAMN02603393 na na 1028799 1280 Staphylococcus aureus subsp. aureus VC40 strain=VC40 na latest Complete Genome Major Full 2012-02-01 ASM24549v1 Institute of Medical Microbiology, Immunology and Parasitology (IMMIP), University of Bonn, Sigmund-Freud-Str. 25, 53105 Bonn, Germany GCA_000245495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/495/GCF_000245495.1_ASM24549v1/ na na na haploid bacteria 2692570 2692570 33.000000 1 1 1 NCBI RefSeq GCF_000245495.1-RS_2025_09_19 2025-09-19 2650 2492 79 22461548 GCF_000245515.1 PRJNA224116 SAMN02604278 na na 1048689 562 Escherichia coli O55:H7 str. RM12579 strain=RM12579 na latest Complete Genome Major Full 2012-02-01 ASM24551v1 USDA/ARS GCA_000245515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/515/GCF_000245515.1_ASM24551v1/ na na na haploid bacteria 5448306 5448306 50.500000 6 6 6 NCBI RefSeq GCF_000245515.1-RS_2025_04_26 2025-04-26 5369 4985 131 22328665 GCF_000245535.1 PRJNA224116 SAMN02603101 na na 1132507 28901 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 strain=P-stx-12 na latest Complete Genome Major Full 2012-02-01 ASM24553v1 Centre for Chemical Biology (CCB@USM) GCA_000245535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/535/GCF_000245535.1_ASM24553v1/ na na na haploid bacteria 4949783 4949783 52.000000 2 2 2 NCBI RefSeq GCF_000245535.1-RS_2025_04_26 2025-04-26 4893 4447 109 22461552 GCF_000245555.1 PRJNA224116 SAMN02471037 AHKH00000000.1 na 1131935 130049 Paenibacillus dendritiformis C454 strain=C454 na latest Contig Major Full 2012-02-01 PdendC454 Tel-Aviv University, Israel GCA_000245555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/555/GCF_000245555.1_PdendC454/ na na na haploid bacteria 6375964 6375964 54.000000 0 199 199 NCBI RefSeq GCF_000245555.1-RS_2026_03_28 2026-03-28 5805 5670 33 22461558 GCF_000245575.1 PRJNA224116 SAMN00117467 AHKU00000000.1 na 904772 1280 Staphylococcus aureus subsp. aureus 21342 strain=21342 na latest Contig Major Full 2012-02-01 ASM24557v2 J. Craig Venter Institute GCA_000245575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/575/GCF_000245575.1_ASM24557v2/ na na na haploid bacteria 2815489 2815489 32.500000 0 108 108 NCBI RefSeq GCF_000245575.1-RS_2025_08_17 2025-08-17 2859 2651 63 na GCF_000245595.1 PRJNA224116 SAMN00116875 AHKV00000000.1 na 904773 1280 Staphylococcus aureus subsp. aureus 21343 strain=21343 na latest Contig Major Full 2012-02-01 ASM24559v2 J. Craig Venter Institute GCA_000245595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/595/GCF_000245595.1_ASM24559v2/ na na na haploid bacteria 2819942 2819942 32.500000 0 61 61 NCBI RefSeq GCF_000245595.1-RS_2025_08_17 2025-08-17 2899 2738 63 na GCF_000245615.1 PRJNA224116 SAMN00117461 AHKW00000000.1 na 904774 1280 Staphylococcus aureus subsp. aureus 21345 strain=21345 na latest Contig Major Full 2012-02-01 ASM24561v2 J. Craig Venter Institute GCA_000245615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/615/GCF_000245615.1_ASM24561v2/ na na na haploid bacteria 2774880 2774880 32.500000 0 67 67 NCBI RefSeq GCF_000245615.1-RS_2025_08_17 2025-08-17 2795 2633 63 na GCF_000245635.1 PRJNA224116 SAMN00117454 AHKX00000000.1 na 904320 1282 Staphylococcus epidermidis VCU041 strain=VCU041 na latest Contig Major Full 2012-02-01 ASM24563v2 J. Craig Venter Institute GCA_000245635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/635/GCF_000245635.1_ASM24563v2/ na na na haploid bacteria 2585009 2585009 32.000000 0 87 87 NCBI RefSeq GCF_000245635.1-RS_2025_07_31 2025-07-31 2546 2365 66 na GCF_000245675.1 PRJNA224116 SAMN00117455 AHKZ00000000.1 na 904324 1282 Staphylococcus epidermidis VCU065 strain=VCU065 na latest Contig Major Full 2012-02-01 ASM24567v2 J. Craig Venter Institute GCA_000245675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/675/GCF_000245675.1_ASM24567v2/ na na na haploid bacteria 2546497 2546497 32.000000 0 87 87 NCBI RefSeq GCF_000245675.1-RS_2025_07_31 2025-07-31 2501 2356 67 na GCF_000245695.1 PRJNA224116 SAMN00117450 AHLU00000000.1 na 904326 1282 Staphylococcus epidermidis VCU081 strain=VCU081 na latest Contig Major Full 2012-02-01 ASM24569v2 J. Craig Venter Institute GCA_000245695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/695/GCF_000245695.1_ASM24569v2/ na na na haploid bacteria 2379998 2379998 32.000000 0 78 78 NCBI RefSeq GCF_000245695.1-RS_2025_07_31 2025-07-31 2280 2178 44 na GCF_000245715.1 PRJNA224116 SAMN02471007 AGFI00000000.1 na 1050222 1050222 Paenibacillus sp. Aloe-11 strain=Aloe-11 na latest Scaffold Major Full 2012-02-09 ASM24571v1 College of Animal Science and Technology, Southwest University, China GCA_000245715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/715/GCF_000245715.1_ASM24571v1/ na na na haploid bacteria 5812362 5792040 46.500000 0 52 334 NCBI RefSeq GCF_000245715.1-RS_2025_08_25 2025-08-25 5471 5152 90 22461553 GCF_000245735.1 PRJNA224116 SAMN02470203 AHTH00000000.1 reference genome 1129374 545533 Alishewanella jeotgali KCTC 22429 strain=KCTC 22429 na latest Contig Major Full 2012-02-03 ASM24573v2 Department of Environmental Science and Ecological Engineering, Korea University GCA_000245735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/735/GCF_000245735.1_ASM24573v2/ na assembly from type material na haploid bacteria 3831357 3831357 50.500000 0 65 65 NCBI RefSeq GCF_000245735.1-RS_2026_03_20 2026-03-20 3615 3491 79 22461542 GCF_000245755.1 PRJNA224116 SAMN02596728 AGEI00000000.1 reference genome 883114 40091 Helcococcus kunzii ATCC 51366 strain=ATCC 51366 na latest Scaffold Major Full 2012-02-07 Helc_kunz_ATCC_51366_V1 Broad Institute GCA_000245755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/755/GCF_000245755.1_Helc_kunz_ATCC_51366_V1/ na assembly from type material na haploid bacteria 2096464 2083191 29.500000 0 2 39 NCBI RefSeq GCF_000245755.1-RS_2026_05_01 2026-05-01 1913 1849 41 na GCF_000245775.1 PRJNA224116 SAMN02463866 ADMB00000000.1 na 742816 437897 Megamonas funiformis YIT 11815 strain=YIT 11815 na latest Scaffold Major Full 2012-02-07 Mega_funi_YIT_11815_V1 Broad Institute GCA_000245775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/775/GCF_000245775.1_Mega_funi_YIT_11815_V1/ na assembly from type material na haploid bacteria 2562512 2533141 31.500000 0 13 116 NCBI RefSeq GCF_000245775.1-RS_2026_04_03 2026-04-03 2569 2490 59 na GCF_000245795.1 PRJNA224116 SAMN02463907 AGEG00000000.1 reference genome 883113 82347 Facklamia languida CCUG 37842 strain=CCUG 37842 na latest Scaffold Major Full 2012-02-07 Fack_lang_CCUG_37842_V1 Broad Institute GCA_000245795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/795/GCF_000245795.1_Fack_lang_CCUG_37842_V1/ na assembly from type material na haploid bacteria 1717767 1708389 44.000000 0 1 17 NCBI RefSeq GCF_000245795.1-RS_2025_12_13 2025-12-13 1600 1517 58 na GCF_000245815.1 PRJNA224116 SAMN02463904 AGEF00000000.1 reference genome 883103 29394 Dolosigranulum pigrum ATCC 51524 strain=ATCC 51524 na latest Scaffold Major Full 2012-02-07 Dolo_pigr_ATCC_51524_V1 Broad Institute GCA_000245815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/815/GCF_000245815.1_Dolo_pigr_ATCC_51524_V1/ na assembly from type material na haploid bacteria 1862135 1846028 39.500000 0 2 16 NCBI RefSeq GCF_000245815.1-RS_2025_08_21 2025-08-21 1726 1665 36 na GCF_000245835.1 PRJNA224116 SAMN02596739 AGVF00000000.1 na 1051055 235 Brucella abortus bv. 1 str. NI435a strain=NI435a na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI435a_V1 Broad Institute GCA_000245835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/835/GCF_000245835.1_Bruc_abor_bv1_NI435a_V1/ na na na haploid bacteria 3303039 3298740 57.000000 0 3 15 NCBI RefSeq GCF_000245835.1-RS_2026_05_15 2026-05-15 3253 2987 86 na GCF_000245855.1 PRJNA224116 SAMN02596741 AGVH00000000.1 na 1051057 235 Brucella abortus bv. 1 str. NI486 strain=NI486 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI486_V1 Broad Institute GCA_000245855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/855/GCF_000245855.1_Bruc_abor_bv1_NI486_V1/ na na na haploid bacteria 3285698 3283799 57.000000 0 4 21 NCBI RefSeq GCF_000245855.1-RS_2026_05_15 2026-05-15 3231 2986 69 na GCF_000245875.1 PRJNA224116 SAMN02596740 AGVG00000000.1 na 1051056 235 Brucella abortus bv. 1 str. NI474 strain=NI474 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI474_V1 Broad Institute GCA_000245875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/875/GCF_000245875.1_Bruc_abor_bv1_NI474_V1/ na na na haploid bacteria 3303032 3299154 57.000000 0 3 15 NCBI RefSeq GCF_000245875.1-RS_2026_05_15 2026-05-15 3247 2983 80 na GCF_000245895.1 PRJNA224116 SAMN02596742 AGVI00000000.1 na 1051058 235 Brucella abortus bv. 1 str. NI488 strain=NI488 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI488_V1 Broad Institute GCA_000245895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/895/GCF_000245895.1_Bruc_abor_bv1_NI488_V1/ na na na haploid bacteria 3295757 3293157 57.000000 0 5 31 NCBI RefSeq GCF_000245895.1-RS_2026_05_17 2026-05-17 3247 2995 69 na GCF_000245915.1 PRJNA224116 SAMN02596743 AGVJ00000000.1 na 1051059 235 Brucella abortus bv. 1 str. NI010 strain=NI010 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI010_V1 Broad Institute GCA_000245915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/915/GCF_000245915.1_Bruc_abor_bv1_NI010_V1/ na na na haploid bacteria 3296700 3291732 57.000000 0 3 14 NCBI RefSeq GCF_000245915.1-RS_2026_05_14 2026-05-14 3234 2981 75 na GCF_000245935.1 PRJNA224116 SAMN02596744 AGVK00000000.1 na 1051060 235 Brucella abortus bv. 1 str. NI016 strain=NI016 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI016_V1 Broad Institute GCA_000245935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/935/GCF_000245935.1_Bruc_abor_bv1_NI016_V1/ na na na haploid bacteria 3286592 3283756 57.000000 0 3 12 NCBI RefSeq GCF_000245935.1-RS_2026_05_15 2026-05-15 3235 2985 69 na GCF_000245955.1 PRJNA224116 SAMN02596745 AGVL00000000.1 na 1051061 235 Brucella abortus bv. 1 str. NI021 strain=NI021 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI021_V1 Broad Institute GCA_000245955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/955/GCF_000245955.1_Bruc_abor_bv1_NI021_V1/ na na na haploid bacteria 3297792 3293739 57.000000 0 3 17 NCBI RefSeq GCF_000245955.1-RS_2026_05_15 2026-05-15 3247 2988 78 na GCF_000245975.1 PRJNA224116 SAMN02596746 AGVM00000000.1 na 1051062 235 Brucella abortus bv. 1 str. NI259 strain=NI259 na latest Scaffold Major Full 2012-02-07 Bruc_abor_bv1_NI259_V1 Broad Institute GCA_000245975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/975/GCF_000245975.1_Bruc_abor_bv1_NI259_V1/ na na na haploid bacteria 3282437 3279800 57.000000 0 4 13 NCBI RefSeq GCF_000245975.1-RS_2026_05_16 2026-05-16 3230 2995 59 na GCF_000245995.1 PRJNA224116 SAMN00739360 AHPR00000000.1 na 1085548 173 Leptospira interrogans serovar Manilae str. M001_Tn_Mutant_Parent strain=M001_Tn_Mutant_Parent na latest Scaffold Major Full 2012-02-03 CLC_glsol001 J. Craig Venter Institute GCA_000245995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/245/995/GCF_000245995.1_CLC_glsol001/ na na na haploid bacteria 4592418 4592320 35.000000 0 271 277 NCBI RefSeq GCF_000245995.1-RS_2026_05_19 2026-05-19 3860 3623 41 na GCF_000246015.1 PRJNA224116 SAMN00739361 AHPS00000000.1 na 1085547 173 Leptospira interrogans serovar Manilae str. M933_lip32_mutant strain=M933_lip32_mutant na latest Scaffold Major Full 2012-02-03 CLC_glsol002 J. Craig Venter Institute GCA_000246015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/015/GCF_000246015.1_CLC_glsol002/ na na na haploid bacteria 4594682 4594607 35.000000 0 271 277 NCBI RefSeq GCF_000246015.1-RS_2026_05_19 2026-05-19 3872 3627 42 na GCF_000246035.1 PRJNA224116 SAMN00739362 AHPT00000000.1 na 1085545 173 Leptospira interrogans serovar Manilae str. M776_fur_mutant strain=M776_fur_mutant na latest Scaffold Major Full 2012-02-03 CLC_glsol003 J. Craig Venter Institute GCA_000246035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/035/GCF_000246035.1_CLC_glsol003/ na na na haploid bacteria 4598978 4598325 35.000000 0 282 327 NCBI RefSeq GCF_000246035.1-RS_2026_05_19 2026-05-19 3871 3626 42 na GCF_000246055.1 PRJNA224116 SAMN00739363 AHPU00000000.1 na 1085546 173 Leptospira interrogans serovar Manilae str. M874_LA0615_mutant strain=M874_LA0615_mutant na latest Scaffold Major Full 2012-02-03 CLC_glsol004 J. Craig Venter Institute GCA_000246055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/055/GCF_000246055.1_CLC_glsol004/ na na na haploid bacteria 4602799 4602393 35.000000 0 309 331 NCBI RefSeq GCF_000246055.1-RS_2026_05_19 2026-05-19 3880 3631 42 na GCF_000246075.1 PRJNA224116 SAMN00739397 AHPV00000000.1 na 1085544 173 Leptospira interrogans serovar Manilae str. M1352_LPS_mutant strain=M1352_LPS_mutant na latest Scaffold Major Full 2012-02-03 CLC_glsol005 J. Craig Venter Institute GCA_000246075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/075/GCF_000246075.1_CLC_glsol005/ na na na haploid bacteria 4597337 4596630 35.000000 0 283 328 NCBI RefSeq GCF_000246075.1-RS_2026_05_19 2026-05-19 3858 3620 42 na GCF_000246095.1 PRJNA224116 SAMN00739364 AHPW00000000.1 na 1049926 173 Leptospira interrogans serovar Pyrogenes str. 2006006956 strain=2006006956 na latest Scaffold Major Full 2012-02-03 CLC_glsol031 J. Craig Venter Institute GCA_000246095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/095/GCF_000246095.1_CLC_glsol031/ na na na haploid bacteria 4772789 4772500 35.000000 0 344 363 NCBI RefSeq GCF_000246095.1-RS_2026_05_19 2026-05-19 4007 3763 42 na GCF_000246115.1 PRJNA224116 SAMN00739365 AHPX00000000.1 na 1049802 173 Leptospira interrogans serovar Bataviae str. 2006006976 strain=2006006976 na latest Scaffold Major Full 2012-02-03 CLC_glsol033 J. Craig Venter Institute GCA_000246115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/115/GCF_000246115.1_CLC_glsol033/ na na na haploid bacteria 4708826 4708342 35.000000 0 314 341 NCBI RefSeq GCF_000246115.1-RS_2026_05_19 2026-05-19 4004 3773 42 na GCF_000246135.1 PRJNA224116 SAMN00739366 AHPY00000000.1 na 1049801 173 Leptospira interrogans serovar Bataviae str. 2006006959 strain=2006006959 na latest Scaffold Major Full 2012-02-03 CLC_glsol034 J. Craig Venter Institute GCA_000246135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/135/GCF_000246135.1_CLC_glsol034/ na na na haploid bacteria 4709453 4708896 35.000000 0 319 349 NCBI RefSeq GCF_000246135.1-RS_2026_05_19 2026-05-19 3993 3761 42 na GCF_000246155.1 PRJNA224116 SAMN00739367 AHPZ00000000.1 na 1049944 29507 Leptospira kirschneri serovar Grippotyphosa str. Duyster-Boelhouwer strain=Duyster-Boelhouwer na latest Scaffold Major Full 2012-02-03 CLC_glsol046 J. Craig Venter Institute GCA_000246155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/155/GCF_000246155.1_CLC_glsol046/ na na na haploid bacteria 4270628 4270528 36.000000 0 266 274 NCBI RefSeq GCF_000246155.1-RS_2025_07_31 2025-07-31 3601 3366 42 na GCF_000246175.1 PRJNA224116 SAMN00739368 AHQA00000000.1 na 1049943 29507 Leptospira kirschneri serovar Grippotyphosa str. 'Brem 127 Duyster' strain=Brem 127 Duyster na latest Scaffold Major Full 2012-02-03 CLC_glsol047 J. Craig Venter Institute GCA_000246175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/175/GCF_000246175.1_CLC_glsol047/ na na na haploid bacteria 4267588 4267495 36.000000 0 263 269 NCBI RefSeq GCF_000246175.1-RS_2025_07_31 2025-07-31 3591 3357 42 na GCF_000246215.1 PRJNA224116 SAMN00739370 AHQC00000000.1 na 1049912 173 Leptospira interrogans serovar Lai str. Lai LPS mutant strain=Lai LPS mutant na latest Scaffold Major Full 2012-02-03 CLC_glsol049 J. Craig Venter Institute GCA_000246215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/215/GCF_000246215.1_CLC_glsol049/ na na na haploid bacteria 4598894 4598574 35.000000 0 250 269 NCBI RefSeq GCF_000246215.1-RS_2026_05_19 2026-05-19 3848 3617 42 na GCF_000246235.1 PRJNA224116 SAMN00739371 AHQD00000000.1 na 1049913 173 Leptospira interrogans serovar Lai str. Langkawi strain=Langkawi na latest Scaffold Major Full 2012-02-03 CLC_glsol050 J. Craig Venter Institute GCA_000246235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/235/GCF_000246235.1_CLC_glsol050/ na na na haploid bacteria 4771678 4771213 35.000000 0 304 328 NCBI RefSeq GCF_000246235.1-RS_2026_05_19 2026-05-19 4076 3875 42 na GCF_000246255.1 PRJNA224116 SAMN00739372 AHQE00000000.1 na 1049805 173 Leptospira interrogans serovar Bataviae str. Swart strain=Swart na latest Scaffold Major Full 2012-02-03 CLC_glsol051 J. Craig Venter Institute GCA_000246255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/255/GCF_000246255.1_CLC_glsol051/ na na na haploid bacteria 4721878 4721243 35.000000 0 318 354 NCBI RefSeq GCF_000246255.1-RS_2026_04_02 2026-04-02 4012 3789 42 na GCF_000246275.1 PRJNA224116 SAMN00739373 AHQF00000000.1 na 1049803 173 Leptospira interrogans serovar Bataviae str. Kariadi-Satu strain=Kariadi-Satu na latest Scaffold Major Full 2012-02-03 CLC_glsol052 J. Craig Venter Institute GCA_000246275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/275/GCF_000246275.1_CLC_glsol052/ na na na haploid bacteria 4681849 4681174 35.000000 0 331 370 NCBI RefSeq GCF_000246275.1-RS_2026_05_19 2026-05-19 3967 3742 42 na GCF_000246295.1 PRJNA224116 SAMN00739374 AHQG00000000.1 na 1049969 29507 Leptospira kirschneri serovar Valbuzzi str. Brem 179 strain=Brem 179 na latest Scaffold Major Full 2012-02-03 CLC_glsol056 J. Craig Venter Institute GCA_000246295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/295/GCF_000246295.1_CLC_glsol056/ na na na haploid bacteria 4310799 4310497 36.000000 0 321 342 NCBI RefSeq GCF_000246295.1-RS_2025_07_31 2025-07-31 3647 3416 42 na GCF_000246315.1 PRJNA224116 SAMN00739375 AHQH00000000.1 na 1049815 173 Leptospira interrogans serovar Bratislava str. Brem 137 strain=Brem 137 na latest Scaffold Major Full 2012-02-03 CLC_glsol058 J. Craig Venter Institute GCA_000246315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/315/GCF_000246315.1_CLC_glsol058/ na na na haploid bacteria 4629078 4628597 35.000000 0 270 303 NCBI RefSeq GCF_000246315.1-RS_2026_05_19 2026-05-19 3875 3640 42 na GCF_000246335.1 PRJNA224116 SAMN00739376 AHQI00000000.1 na 1049962 29507 Leptospira kirschneri serovar Mozdok str. Brem 166 strain=Brem 166 na latest Scaffold Major Full 2012-02-03 CLC_glsol059 J. Craig Venter Institute GCA_000246335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/335/GCF_000246335.1_CLC_glsol059/ na na na haploid bacteria 4353628 4353376 36.000000 0 475 491 NCBI RefSeq GCF_000246335.1-RS_2025_07_31 2025-07-31 3714 3485 43 na GCF_000246355.1 PRJNA224116 SAMN00739378 AHQJ00000000.1 na 1049961 29507 Leptospira kirschneri serovar Mozdok str. 'B 81/7 type 3/Tsaratsovo' strain=B 81/7 type 3/Tsaratsovo na latest Scaffold Major Full 2012-02-03 CLC_glsol065 J. Craig Venter Institute GCA_000246355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/355/GCF_000246355.1_CLC_glsol065/ na na na haploid bacteria 4247341 4247053 36.000000 0 570 592 NCBI RefSeq GCF_000246355.1-RS_2025_07_31 2025-07-31 3668 3311 42 na GCF_000246375.1 PRJNA224116 SAMN00739379 AHQK00000000.1 na 1085550 28183 Leptospira santarosai serovar Arenal str. 7 strain=7 na latest Scaffold Major Full 2012-02-03 CLC_glsol066 J. Craig Venter Institute GCA_000246375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/375/GCF_000246375.1_CLC_glsol066/ na na na haploid bacteria 4179638 4179624 41.500000 0 536 537 NCBI RefSeq GCF_000246375.1-RS_2025_07_31 2025-07-31 4148 3744 42 na GCF_000246395.1 PRJNA224116 SAMN00739380 AHQL00000000.1 na 1085549 28183 Leptospira santarosai serovar Arenal str. 11 strain=11 na latest Scaffold Major Full 2012-02-03 CLC_glsol067 J. Craig Venter Institute GCA_000246395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/395/GCF_000246395.1_CLC_glsol067/ na na na haploid bacteria 4013562 4013504 41.500000 0 407 411 NCBI RefSeq GCF_000246395.1-RS_2026_05_19 2026-05-19 3876 3568 41 na GCF_000246415.1 PRJNA224116 SAMN00739381 AHQM00000000.1 na 1085542 173 Leptospira interrogans serovar Pyrogenes str. SriLanka1 strain=SriLanka1 na latest Scaffold Major Full 2012-02-03 CLC_glsol068 J. Craig Venter Institute GCA_000246415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/415/GCF_000246415.1_CLC_glsol068/ na na na haploid bacteria 4837126 4836847 35.000000 0 667 689 NCBI RefSeq GCF_000246415.1-RS_2026_05_27 2026-05-27 4302 3983 41 na GCF_000246435.1 PRJNA224116 SAMN00739377 AHQN00000000.1 na 1085543 173 Leptospira interrogans serovar Pyrogenes str. SriLanka2 strain=SriLanka2 na latest Scaffold Major Full 2012-02-03 CLC_glsol069 J. Craig Venter Institute GCA_000246435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/435/GCF_000246435.1_CLC_glsol069/ na na na haploid bacteria 4902160 4901573 35.000000 0 964 1003 NCBI RefSeq GCF_000246435.1-RS_2026_05_28 2026-05-28 4500 4105 43 na GCF_000246455.1 PRJNA224116 SAMN00739382 AHQO00000000.1 na 1049820 173 Leptospira interrogans serovar Copenhageni str. P2518 strain=P2518 na latest Scaffold Major Full 2012-02-03 CLC_glsol071 J. Craig Venter Institute GCA_000246455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/455/GCF_000246455.1_CLC_glsol071/ na na na haploid bacteria 4545020 4544572 35.000000 0 492 525 NCBI RefSeq GCF_000246455.1-RS_2025_07_31 2025-07-31 3821 3632 41 na GCF_000246475.1 PRJNA224116 SAMN00739388 AHQP00000000.1 na 1049907 173 Leptospira interrogans serovar Icterohaemorrhagiae str. P2422 strain=P2422 na latest Scaffold Major Full 2012-02-03 CLC_glsol073 J. Craig Venter Institute GCA_000246475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/475/GCF_000246475.1_CLC_glsol073/ na na na haploid bacteria 4530019 4529828 35.000000 0 412 426 NCBI RefSeq GCF_000246475.1-RS_2025_07_31 2025-07-31 3798 3619 41 na GCF_000246495.1 PRJNA224116 SAMN00739383 AHQQ00000000.1 na 1049909 173 Leptospira interrogans serovar Icterohaemorrhagiae str. P2554 strain=P2554 na latest Scaffold Major Full 2012-02-03 CLC_glsol074 J. Craig Venter Institute GCA_000246495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/495/GCF_000246495.1_CLC_glsol074/ na na na haploid bacteria 4547086 4546870 35.000000 0 471 486 NCBI RefSeq GCF_000246495.1-RS_2025_07_31 2025-07-31 3835 3625 42 na GCF_000246515.1 PRJNA224116 SAMN00739384 AHQR00000000.1 na 1049908 173 Leptospira interrogans serovar Icterohaemorrhagiae str. P2547 strain=P2547 na latest Scaffold Major Full 2012-02-03 CLC_glsol075 J. Craig Venter Institute GCA_000246515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/515/GCF_000246515.1_CLC_glsol075/ na na na haploid bacteria 4547256 4547004 35.000000 0 462 479 NCBI RefSeq GCF_000246515.1-RS_2025_07_31 2025-07-31 3804 3625 42 na GCF_000246535.1 PRJNA224116 SAMN00739385 AHQS00000000.1 na 1049814 173 Leptospira interrogans serovar Bim str. P2529 strain=P2529 na latest Scaffold Major Full 2012-02-03 CLC_glsol076 J. Craig Venter Institute GCA_000246535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/535/GCF_000246535.1_CLC_glsol076/ na na na haploid bacteria 4837877 4837583 35.000000 0 957 976 NCBI RefSeq GCF_000246535.1-RS_2025_08_06 2025-08-06 4362 4009 41 na GCF_000246555.1 PRJNA224116 SAMN00739389 AHQT00000000.1 na 1049773 174 Leptospira borgpetersenii serovar Kenya str. TE 0159 strain=TE 0159 na latest Scaffold Major Full 2012-02-03 CLC_glsol078 J. Craig Venter Institute GCA_000246555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/555/GCF_000246555.1_CLC_glsol078/ na na na haploid bacteria 3923830 3923771 40.000000 0 241 245 NCBI RefSeq GCF_000246555.1-RS_2026_05_19 2026-05-19 3539 3287 42 na GCF_000246575.1 PRJNA224116 SAMN00739390 AHQU00000000.1 na 1049821 173 Leptospira interrogans serovar Copenhageni str. R103 strain=R103 na latest Scaffold Major Full 2012-02-03 CLC_glsol166 J. Craig Venter Institute GCA_000246575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/575/GCF_000246575.1_CLC_glsol166/ na na na haploid bacteria 4557317 4556952 35.000000 0 228 255 NCBI RefSeq GCF_000246575.1-RS_2025_07_31 2025-07-31 3779 3620 42 na GCF_000246595.1 PRJNA224116 SAMN00739391 AHQV00000000.1 na 1049807 173 Leptospira interrogans serovar Bataviae str. UT234 strain=UT234 na latest Scaffold Major Full 2012-02-03 CLC_glsol169 J. Craig Venter Institute GCA_000246595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/595/GCF_000246595.1_CLC_glsol169/ na na na haploid bacteria 4830171 4830072 35.000000 0 410 416 NCBI RefSeq GCF_000246595.1-RS_2026_05_19 2026-05-19 4184 3921 42 na GCF_000246615.1 PRJNA224116 SAMN00739392 AHQW00000000.1 na 1049921 173 Leptospira interrogans serovar Medanensis str. L0887 strain=L0887 na latest Scaffold Major Full 2012-02-03 CLC_glsol170 J. Craig Venter Institute GCA_000246615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/615/GCF_000246615.1_CLC_glsol170/ na na na haploid bacteria 4760420 4760260 35.000000 0 365 374 NCBI RefSeq GCF_000246615.1-RS_2026_05_19 2026-05-19 4066 3809 42 na GCF_000246635.1 PRJNA224116 SAMN00739393 AHQX00000000.1 na 1088543 28184 Leptospira weilii str. LNT 1194 strain=LNT 1194 na latest Scaffold Major Full 2012-02-03 CLC_glsol171 J. Craig Venter Institute GCA_000246635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/635/GCF_000246635.1_CLC_glsol171/ na na na haploid bacteria 4249835 4249587 40.500000 0 367 384 NCBI RefSeq GCF_000246635.1-RS_2025_07_31 2025-07-31 3950 3644 42 na GCF_000246655.1 PRJNA224116 SAMN00739394 AHQY00000000.1 na 1088544 28184 Leptospira weilii str. UI 14631 strain=UI 14631 na latest Scaffold Major Full 2012-02-03 CLC_glsol172 J. Craig Venter Institute GCA_000246655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/655/GCF_000246655.1_CLC_glsol172/ na na na haploid bacteria 4313152 4312967 40.500000 0 431 446 NCBI RefSeq GCF_000246655.1-RS_2025_07_31 2025-07-31 4033 3698 42 na GCF_000246675.1 PRJNA224116 SAMN00739395 AHQZ00000000.1 na 1049947 29507 Leptospira kirschneri serovar Grippotyphosa str. UT130 strain=UT130 na latest Scaffold Major Full 2012-02-03 CLC_glsol173 J. Craig Venter Institute GCA_000246675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/675/GCF_000246675.1_CLC_glsol173/ na na na haploid bacteria 4465030 4464839 36.000000 0 410 422 NCBI RefSeq GCF_000246675.1-RS_2025_07_31 2025-07-31 3835 3555 42 na GCF_000246695.1 PRJNA224116 SAMN00739396 AHRA00000000.1 na 1049765 174 Leptospira borgpetersenii serovar Javanica str. L0864 strain=L0864 na latest Scaffold Major Full 2012-02-03 CLC_glsol175 J. Craig Venter Institute GCA_000246695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/695/GCF_000246695.1_CLC_glsol175/ na na na haploid bacteria 3855185 3855146 40.000000 0 178 181 NCBI RefSeq GCF_000246695.1-RS_2026_05_19 2026-05-19 3455 3191 42 na GCF_000246715.1 PRJNA224116 SAMN02471340 AHIZ00000000.1 na 1130827 35793 Rickettsia sibirica subsp. sibirica BJ-90 strain=BJ-90 na latest Contig Major Full 2012-02-03 ASM24671v2 Unite des Rickettsies GCA_000246715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/715/GCF_000246715.1_ASM24671v2/ na na na haploid bacteria 1254734 1254734 32.500000 0 8 8 NCBI RefSeq GCF_000246715.1-RS_2026_01_08 2026-01-08 1436 1288 40 22493192 GCF_000246755.1 PRJNA224116 SAMN00000317 na na 491078 160 Treponema pallidum subsp. pertenue str. SamoaD strain=pertenue Samoa D na latest Chromosome Major Full 2012-02-06 ASM24675v1 Baylor College of Medecine GCA_000246755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/755/GCF_000246755.1_ASM24675v1/ na na na haploid bacteria 1139330 1139100 53.000000 1 1 7 NCBI RefSeq GCF_000246755.1-RS_2026_04_01 2026-04-01 1040 978 54 22292095 GCF_000246775.1 PRJNA224116 SAMN02603003 na na 491079 160 Treponema pallidum subsp. pertenue str. CDC2 strain=CDC2 na latest Chromosome Major Full 2012-02-06 ASM24677v1 Baylor College of Medicine GCA_000246775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/775/GCF_000246775.1_ASM24677v1/ na na na haploid bacteria 1139744 1139654 53.000000 1 1 4 NCBI RefSeq GCF_000246775.1-RS_2025_07_04 2025-07-04 1040 977 54 na GCF_000246795.1 PRJNA224116 SAMN02603004 na na 491080 160 Treponema pallidum subsp. pertenue str. Gauthier strain=Gauthier na latest Chromosome Major Full 2012-02-06 ASM24679v1 Baylor College of Medicine GCA_000246795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/795/GCF_000246795.1_ASM24679v1/ na na na haploid bacteria 1139417 1139325 53.000000 1 1 5 NCBI RefSeq GCF_000246795.1-RS_2025_07_04 2025-07-04 1038 976 54 na GCF_000246815.1 PRJNA224116 SAMN02603007 na na 491081 160 Treponema pallidum subsp. pallidum DAL-1 strain=DAL-1 na latest Chromosome Major Full 2012-02-06 ASM24681v1 Baylor College of Medicine GCA_000246815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/815/GCF_000246815.1_ASM24681v1/ na na na haploid bacteria 1139971 1139909 53.000000 1 1 5 NCBI RefSeq GCF_000246815.1-RS_2026_04_02 2026-04-02 1042 978 54 22292095 GCF_000246855.1 PRJNA224116 SAMN02232043 na reference genome 700598 354356 Niastella koreensis GR20-10 strain=GR20-10 na latest Complete Genome Major Full 2011-12-14 ASM24685v1 DOE Joint Genome Institute GCA_000246855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/855/GCF_000246855.1_ASM24685v1/ na assembly from type material na haploid bacteria 9033684 9033684 45.000000 1 1 1 NCBI RefSeq GCF_000246855.1-RS_2026_04_26 2026-04-26 7220 7126 68 na GCF_000246875.1 PRJNA224116 SAMD00036607 BAEU00000000.1 na 590061 590061 Halomonas sp. KM-1 strain=KM-1 na latest Contig Major Full 2012-02-06 ASM24687v2 National Institute of Advanced Industrial Science and Technology (AIST) GCA_000246875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/875/GCF_000246875.1_ASM24687v2/ na na na haploid bacteria 4992811 4992811 64.000000 0 173 173 NCBI RefSeq GCF_000246875.1-RS_2024_08_17 2024-08-17 4685 4563 64 22172913;22535927 GCF_000246895.1 PRJNA224116 SAMD00036608 BAEV00000000.1 reference genome 545243 1137848 Clostridium arbusti SL206 strain=SL206 na latest Contig Major Full 2012-02-06 ASM24689v2 Korea Research Institute of Bioscience and Biotechnology GCA_000246895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/895/GCF_000246895.1_ASM24689v2/ na assembly from type material na haploid bacteria 3970278 3970278 30.000000 0 243 243 NCBI RefSeq GCF_000246895.1-RS_2025_09_09 2025-09-09 3783 3608 93 22535938 GCF_000246925.1 PRJNA224116 SAMD00036609 BAEW00000000.1 reference genome 875454 1175452 Peptoniphilus rhinitidis 1-13 strain=42017 na latest Contig Major Full 2012-02-07 ASM24692v2 Korea Research Institute of Bioscience and Biotechnology GCA_000246925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/925/GCF_000246925.1_ASM24692v2/ na assembly from type material na haploid bacteria 1885265 1885265 30.000000 0 56 56 NCBI RefSeq GCF_000246925.1-RS_2025_08_08 2025-08-08 1878 1798 48 22493209 GCF_000246945.1 PRJNA224116 SAMD00036610 BAEX00000000.1 reference genome 1008457 1183151 Myroides injenensis M09-0166 strain=M09-0166 na latest Contig Major Full 2012-02-07 ASM24694v2 Korea Research Institute of Bioscience and Biotechnology GCA_000246945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/945/GCF_000246945.1_ASM24694v2/ na assembly from type material na haploid bacteria 3458160 3458160 31.500000 0 226 226 NCBI RefSeq GCF_000246945.1-RS_2025_08_08 2025-08-08 3080 2952 74 22535932 GCF_000246965.1 PRJNA224116 SAMD00036611 BAEY00000000.1 reference genome 1123284 444463 Sporolactobacillus vineae DSM 21990 = SL153 strain=SL153 na latest Contig Major Full 2012-02-07 ASM24696v2 Korea Research Institute of Bioscience and Biotechnology GCA_000246965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/965/GCF_000246965.1_ASM24696v2/ na assembly from type material na haploid bacteria 2873984 2873984 49.500000 0 92 92 NCBI RefSeq GCF_000246965.1-RS_2025_08_08 2025-08-08 2810 2699 74 22582374 GCF_000246985.2 PRJNA224116 SAMN02603679 na reference genome 523849 2265 Thermococcus litoralis DSM 5473 strain=DSM 5473 na latest Complete Genome Major Full 2013-08-13 ASM24698v3 New England Biolabs, Inc. GCA_000246985.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/246/985/GCF_000246985.2_ASM24698v3/ na assembly from type material na haploid archaea 2215172 2215172 43.000000 1 1 1 NCBI RefSeq GCF_000246985.2-RS_2025_11_21 2025-11-21 2515 2402 52 22493191 GCF_000247005.2 PRJNA224116 SAMN02470464 AHTI00000000.2 na 1136159 47951 Vibrio cyclitrophicus 1F111 strain=1F111 na latest Scaffold Major Full 2016-09-16 ASM24700v2 Massachusetts Institute of Technology GCA_000247005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/005/GCF_000247005.2_ASM24700v2/ na na na haploid bacteria 5229607 5222588 43.500000 0 159 373 NCBI RefSeq GCF_000247005.2-RS_2026_04_07 2026-04-07 4775 4548 54 22491847 GCF_000247025.1 PRJNA224116 SAMN00116890 AHLA00000000.1 na 904335 1282 Staphylococcus epidermidis VCU117 strain=VCU117 na latest Contig Major Full 2012-02-07 ASM24702v2 J. Craig Venter Institute GCA_000247025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/025/GCF_000247025.1_ASM24702v2/ na na na haploid bacteria 2448224 2448224 32.000000 0 90 90 NCBI RefSeq GCF_000247025.1-RS_2025_07_31 2025-07-31 2355 2220 64 na GCF_000247045.1 PRJNA224116 SAMN00116847 AHLB00000000.1 na 904336 1282 Staphylococcus epidermidis VCU118 strain=VCU118 na latest Contig Major Full 2012-02-07 ASM24704v2 J. Craig Venter Institute GCA_000247045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/045/GCF_000247045.1_ASM24704v2/ na na na haploid bacteria 2551817 2551817 32.000000 0 75 75 NCBI RefSeq GCF_000247045.1-RS_2025_07_31 2025-07-31 2521 2360 64 na GCF_000247065.1 PRJNA224116 SAMN00117466 AHLC00000000.1 na 904337 1282 Staphylococcus epidermidis VCU120 strain=VCU120 na latest Contig Major Full 2012-02-07 ASM24706v2 J. Craig Venter Institute GCA_000247065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/065/GCF_000247065.1_ASM24706v2/ na na na haploid bacteria 2553157 2553157 32.000000 0 61 61 NCBI RefSeq GCF_000247065.1-RS_2025_07_31 2025-07-31 2489 2344 67 na GCF_000247085.1 PRJNA224116 SAMN00116834 AHLD00000000.1 na 904339 1290 Staphylococcus hominis VCU122 strain=VCU122 na latest Contig Major Full 2012-02-07 ASM24708v2 J. Craig Venter Institute GCA_000247085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/085/GCF_000247085.1_ASM24708v2/ na na na haploid bacteria 2232173 2232173 31.500000 0 70 70 NCBI RefSeq GCF_000247085.1-RS_2025_07_31 2025-07-31 2254 2113 68 na GCF_000247125.1 PRJNA224116 SAMN00116836 AHLF00000000.1 na 904341 1282 Staphylococcus epidermidis VCU125 strain=VCU125 na latest Contig Major Full 2012-02-07 ASM24712v2 J. Craig Venter Institute GCA_000247125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/125/GCF_000247125.1_ASM24712v2/ na na na haploid bacteria 2436337 2436337 32.000000 0 70 70 NCBI RefSeq GCF_000247125.1-RS_2025_07_31 2025-07-31 2348 2229 68 na GCF_000247145.1 PRJNA224116 SAMN00116846 AHLG00000000.1 na 904342 1282 Staphylococcus epidermidis VCU126 strain=VCU126 na latest Contig Major Full 2012-02-07 ASM24714v2 J. Craig Venter Institute GCA_000247145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/145/GCF_000247145.1_ASM24714v2/ na na na haploid bacteria 2445254 2445254 32.000000 0 80 80 NCBI RefSeq GCF_000247145.1-RS_2025_07_31 2025-07-31 2353 2208 67 na GCF_000247165.1 PRJNA224116 SAMN00117463 AHLH00000000.1 na 904343 1282 Staphylococcus epidermidis VCU127 strain=VCU127 na latest Contig Major Full 2012-02-07 ASM24716v2 J. Craig Venter Institute GCA_000247165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/165/GCF_000247165.1_ASM24716v2/ na na na haploid bacteria 2429603 2429603 32.000000 0 81 81 NCBI RefSeq GCF_000247165.1-RS_2025_07_31 2025-07-31 2350 2203 64 na GCF_000247185.1 PRJNA224116 SAMN00116852 AHLI00000000.1 na 904344 1282 Staphylococcus epidermidis VCU128 strain=VCU128 na latest Contig Major Full 2012-02-07 ASM24718v2 J. Craig Venter Institute GCA_000247185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/185/GCF_000247185.1_ASM24718v2/ na na na haploid bacteria 2527042 2527042 32.000000 0 58 58 NCBI RefSeq GCF_000247185.1-RS_2025_07_31 2025-07-31 2470 2298 68 na GCF_000247205.1 PRJNA224116 SAMN00117464 AHLJ00000000.1 na 904345 1282 Staphylococcus epidermidis VCU129 strain=VCU129 na latest Contig Major Full 2012-02-07 ASM24720v2 J. Craig Venter Institute GCA_000247205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/205/GCF_000247205.1_ASM24720v2/ na na na haploid bacteria 2435484 2435484 32.000000 0 36 36 NCBI RefSeq GCF_000247205.1-RS_2026_01_11 2026-01-11 2341 2214 66 na GCF_000247225.1 PRJNA224116 SAMN02436593 AHLK00000000.1 na 904346 28035 Staphylococcus lugdunensis VCU139 strain=VCU139 na latest Contig Major Full 2012-02-07 ASM24722v2 J. Craig Venter Institute GCA_000247225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/225/GCF_000247225.1_ASM24722v2/ na na na haploid bacteria 2524140 2524140 33.500000 0 69 69 NCBI RefSeq GCF_000247225.1-RS_2025_07_31 2025-07-31 2469 2279 65 na GCF_000247275.1 PRJNA224116 SAMN02436431 AHLL00000000.1 na 904775 1280 Staphylococcus aureus subsp. aureus IS-3 strain=IS-3 na latest Contig Major Full 2012-02-08 ASM24727v2 J. Craig Venter Institute GCA_000247275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/275/GCF_000247275.1_ASM24727v2/ na na na haploid bacteria 2896386 2896386 33.000000 0 91 91 NCBI RefSeq GCF_000247275.1-RS_2025_08_17 2025-08-17 3010 2766 74 na GCF_000247375.1 PRJNA224116 SAMN00189691 AHLR00000000.1 na 904781 1280 Staphylococcus aureus subsp. aureus IS-105 strain=IS-105 na latest Contig Major Full 2012-02-08 ASM24737v2 J. Craig Venter Institute GCA_000247375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/375/GCF_000247375.1_ASM24737v2/ na na na haploid bacteria 2775462 2775462 32.500000 0 127 127 NCBI RefSeq GCF_000247375.1-RS_2025_08_18 2025-08-18 2846 2604 61 na GCF_000247395.1 PRJNA224116 SAMN00189692 AHLS00000000.1 na 904782 1280 Staphylococcus aureus subsp. aureus IS-111 strain=IS-111 na latest Contig Major Full 2012-02-08 ASM24739v2 J. Craig Venter Institute GCA_000247395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/395/GCF_000247395.1_ASM24739v2/ na na na haploid bacteria 2935250 2935250 32.500000 0 147 147 NCBI RefSeq GCF_000247395.1-RS_2025_08_18 2025-08-18 3085 2791 64 na GCF_000247415.1 PRJNA224116 SAMN00189693 AHLT00000000.1 na 904783 1280 Staphylococcus aureus subsp. aureus IS-122 strain=IS-122 na latest Contig Major Full 2012-02-08 ASM24741v2 J. Craig Venter Institute GCA_000247415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/415/GCF_000247415.1_ASM24741v2/ na na na haploid bacteria 2808298 2808298 32.500000 0 96 96 NCBI RefSeq GCF_000247415.1-RS_2025_08_18 2025-08-18 2868 2667 66 na GCF_000247435.1 PRJNA224116 SAMN02471696 AHKM00000000.1 na 1131757 287 Pseudomonas aeruginosa MPAO1/P1 strain=MPAO1/P1 na latest Contig Major Full 2012-02-08 ASM24743v2 Argonne National Laboratory GCA_000247435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/435/GCF_000247435.1_ASM24743v2/ na na na haploid bacteria 6260813 6260813 66.500000 0 140 140 NCBI RefSeq GCF_000247435.1-RS_2025_05_16 2025-05-16 5906 5722 72 22952955 GCF_000247455.1 PRJNA224116 SAMN02471697 AHKN00000000.1 na 1131758 287 Pseudomonas aeruginosa MPAO1/P2 strain=MPAO1/P2 na latest Contig Major Full 2012-02-08 ASM24745v2 Argonne National Laboratory GCA_000247455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/455/GCF_000247455.1_ASM24745v2/ na na na haploid bacteria 6276335 6276335 66.500000 0 301 301 NCBI RefSeq GCF_000247455.1-RS_2025_05_16 2025-05-16 6057 5783 69 22952955 GCF_000247475.1 PRJNA224116 SAMN02470738 AHZC00000000.1 na 1125979 1125979 Rhizobium sp. PDO1-076 strain=PDO-076 na latest Contig Major Full 2012-02-08 ASM24747v2 Oak Ridge National Laboratory GCA_000247475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/475/GCF_000247475.1_ASM24747v2/ na na na haploid bacteria 5505000 5505000 60.000000 0 441 441 NCBI RefSeq GCF_000247475.1-RS_2026_01_06 2026-01-06 5424 5137 52 22493196 GCF_000247495.1 PRJNA224116 SAMN02470160 AHVZ00000000.1 na 1112209 1112209 Psychrobacter sp. PAMC 21119 strain=PAMC 21119 na latest Contig Major Full 2012-02-09 ASM24749v2 Korea Polar Research Institute GCA_000247495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/495/GCF_000247495.1_ASM24749v2/ na na na haploid bacteria 3510716 3510716 43.500000 0 42 42 NCBI RefSeq GCF_000247495.1-RS_2025_01_31 2025-01-31 2900 2806 60 22493207 GCF_000247525.1 PRJNA224116 SAMN02471822 AFNE00000000.1 na 1030842 1265 Ruminococcus flavefaciens 17 strain=17 na latest Contig Major Full 2012-02-10 ASM24752v2 University of Illinois GCA_000247525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/525/GCF_000247525.1_ASM24752v2/ na na na haploid bacteria 3454940 3454940 45.000000 0 489 489 NCBI RefSeq GCF_000247525.1-RS_2025_06_06 2025-06-06 3458 3203 56 22004549 GCF_000247565.1 PRJNA224116 SAMN02604338 na reference genome 1142511 51229 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) na WGM latest Complete Genome Major Full 2012-02-10 ASM24756v1 Yale University School of Public Health GCA_000247565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/565/GCF_000247565.1_ASM24756v1/ na na na haploid bacteria 719535 719535 25.000000 1 1 1 NCBI RefSeq GCF_000247565.1-RS_2025_12_11 2025-12-11 690 635 44 22334516 GCF_000247605.1 PRJNA224116 SAMN02603267 na reference genome 931626 33952 Acetobacterium woodii DSM 1030 strain=DSM 1030 na latest Complete Genome Major Full 2012-02-14 ASM24760v1 Georg-August-University Goettingen GCA_000247605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/605/GCF_000247605.1_ASM24760v1/ na assembly from type material na haploid bacteria 4044777 4044777 39.500000 1 1 1 NCBI RefSeq GCF_000247605.1-RS_2025_12_13 2025-12-13 3719 3609 80 22479398 GCF_000247625.1 PRJNA224116 SAMN02471337 AHZB00000000.1 na 1144280 35793 Rickettsia sibirica subsp. mongolitimonae HA-91 strain=HA-91 na latest Contig Major Full 2012-02-14 ASM24762v2 URMITE CNRS UMR 6236 IRD 198 GCA_000247625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/625/GCF_000247625.1_ASM24762v2/ na assembly from type material na haploid bacteria 1252337 1252337 32.500000 0 21 21 NCBI RefSeq GCF_000247625.1-RS_2026_01_08 2026-01-08 1450 1257 40 22493199 GCF_000247645.1 PRJNA224116 SAMN02470161 AHWA00000000.1 na 1112215 1112215 Salinibacterium sp. PAMC 21357 strain=PAMC 21357 na latest Contig Major Full 2012-02-14 ASM24764v2 Korea Polar Research Institute GCA_000247645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/645/GCF_000247645.1_ASM24764v2/ na na na haploid bacteria 3109262 3109262 60.000000 0 6 6 NCBI RefSeq GCF_000247645.1-RS_2025_08_27 2025-08-27 3051 2914 55 22493208 GCF_000247665.3 PRJNA224116 SAMN02469320 AHZD00000000.2 na 1137135 562 Escherichia coli O157:H43 str. T22 strain=T22 na latest Scaffold Major Full 2013-04-12 EcoliT22_2.0 BAYGEN GCA_000247665.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/665/GCF_000247665.3_EcoliT22_2.0/ na na na haploid bacteria 4958978 4958978 51.000000 1 64 64 NCBI RefSeq GCF_000247665.3-RS_2026_06_09 2026-06-09 4920 4511 84 23723396 GCF_000247715.1 PRJNA224116 SAMN02603285 na reference genome 1112204 84595 Gordonia polyisoprenivorans VH2 strain=VH2 na latest Complete Genome Major Full 2012-02-16 ASM24771v1 Goettingen Genomics Laboratory GCA_000247715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/715/GCF_000247715.1_ASM24771v1/ na na na haploid bacteria 5844299 5844299 67.000000 2 2 2 NCBI RefSeq GCF_000247715.1-RS_2026_03_28 2026-03-28 5257 5122 62 22327575 GCF_000247735.1 PRJNA224116 SAMN02470702 AGRI00000000.1 na 1036177 1590 Lactiplantibacillus plantarum subsp. plantarum NC8 strain=NC8 na latest Contig Major Full 2012-02-16 ASM24773v2 CMBI Radboud University Medical Centre, Nijmegen GCA_000247735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/735/GCF_000247735.1_ASM24773v2/ na na na haploid bacteria 3207224 3207224 44.500000 0 10 10 NCBI RefSeq GCF_000247735.1-RS_2026_05_01 2026-05-01 3044 2921 82 22493200 GCF_000247755.1 PRJNA224116 SAMN02471362 AFVV00000000.1 na 1036735 1685 Bifidobacterium breve CECT 7263 strain=CECT 7263 na latest Contig Major Full 2012-02-16 ASM24775v2 Universidad Complutense de Madrid GCA_000247755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/755/GCF_000247755.1_ASM24775v2/ na na na haploid bacteria 2314396 2314396 59.000000 0 34 34 NCBI RefSeq GCF_000247755.1-RS_2026_03_28 2026-03-28 2000 1852 59 22740680 GCF_000247775.1 PRJNA224116 SAMN02471359 AICN00000000.1 na 1144300 227942 Limosilactobacillus gastricus PS3 strain=PS3 na latest Contig Major Full 2012-02-16 ASM24777v2 Era7 Bioinformatics GCA_000247775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/775/GCF_000247775.1_ASM24777v2/ na na na haploid bacteria 1904872 1904872 42.000000 0 80 80 NCBI RefSeq GCF_000247775.1-RS_2026_01_27 2026-01-27 1998 1888 54 23846278 GCF_000247855.1 PRJNA224116 SAMN02463894 AGDJ00000000.1 na 883118 571 Klebsiella oxytoca 10-5243 strain=Oct-43 na latest Scaffold Major Full 2012-02-21 Kleb_oxyt_10-5243_V1 Broad Institute GCA_000247855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/855/GCF_000247855.1_Kleb_oxyt_10-5243_V1/ na na na haploid bacteria 5994455 5981227 55.000000 0 3 38 NCBI RefSeq GCF_000247855.1-RS_2025_12_06 2025-12-06 5623 5446 111 na GCF_000247875.1 PRJNA224116 SAMN02463895 AGDL00000000.1 na 883120 571 Klebsiella oxytoca 10-5245 strain=Oct-45 na latest Scaffold Major Full 2012-02-21 Kleb_oxyt_10-5245_V1 Broad Institute GCA_000247875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/875/GCF_000247875.1_Kleb_oxyt_10-5245_V1/ na na na haploid bacteria 6178377 6152139 55.000000 0 6 52 NCBI RefSeq GCF_000247875.1-RS_2025_12_22 2025-12-22 5878 5643 92 na GCF_000247895.1 PRJNA224116 SAMN02463896 AGDM00000000.1 na 883121 54291 Klebsiella ornithinolytica 10-5246 strain=Oct-46 na latest Scaffold Major Full 2012-02-21 Kleb_oxyt_10-5246_V1 Broad Institute GCA_000247895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/895/GCF_000247895.1_Kleb_oxyt_10-5246_V1/ na na na haploid bacteria 5735978 5706020 55.500000 0 4 58 NCBI RefSeq GCF_000247895.1-RS_2025_12_16 2025-12-16 5427 5221 94 na GCF_000247995.1 PRJNA224116 SAMD00041798 BAFE00000000.1 reference genome 1089455 746032 Mobilicoccus pelagius NBRC 104925 strain=NBRC 104925 na latest Contig Major Full 2012-02-18 ASM24799v2 National Institute of Technology and Evaluation GCA_000247995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/247/995/GCF_000247995.1_ASM24799v2/ na assembly from type material na haploid bacteria 3544917 3544917 72.000000 0 97 97 NCBI RefSeq GCF_000247995.1-RS_2025_09_02 2025-09-02 3139 3028 54 na GCF_000248015.1 PRJNA224116 SAMD00041803 BAFF00000000.1 na 1115512 565 Atlantibacter hermannii NBRC 105704 strain=NBRC 105704 na latest Contig Major Full 2012-02-18 ASM24801v2 National Institute of Technology and Evaluation (NITE) GCA_000248015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/015/GCF_000248015.1_ASM24801v2/ na assembly from type material na haploid bacteria 4495280 4495280 54.000000 0 44 44 NCBI RefSeq GCF_000248015.1-RS_2025_08_09 2025-08-09 4240 4099 75 na GCF_000248035.1 PRJNA224116 SAMD00041763 BAFD00000000.1 na 1089454 2055 Gordonia terrae NBRC 100016 strain=NBRC 100016 na latest Contig Major Full 2012-02-18 ASM24803v2 National Institute of Technology and Evaluation GCA_000248035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/035/GCF_000248035.1_ASM24803v2/ na assembly from type material na haploid bacteria 5669149 5669149 68.000000 0 130 130 NCBI RefSeq GCF_000248035.1-RS_2025_09_02 2025-09-02 5159 5022 55 na GCF_000248055.1 PRJNA224116 SAMD00041776 BAFC00000000.1 reference genome 1089453 36823 Gordonia sputi NBRC 100414 strain=NBRC 100414 na latest Contig Major Full 2012-02-18 ASM24805v2 National Institute of Technology and Evaluation GCA_000248055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/055/GCF_000248055.1_ASM24805v2/ na assembly from type material na haploid bacteria 4952979 4952979 65.500000 0 158 158 NCBI RefSeq GCF_000248055.1-RS_2025_09_02 2025-09-02 4569 4396 53 na GCF_000248075.1 PRJNA224116 SAMD00041778 BAFB00000000.1 na 1108044 249058 Gordonia otitidis NBRC 100426 strain=NBRC 100426 na latest Contig Major Full 2012-02-18 ASM24807v2 National Institute of Technology and Evaluation (NITE) GCA_000248075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/075/GCF_000248075.1_ASM24807v2/ na assembly from type material na haploid bacteria 5295895 5295895 65.500000 0 273 273 NCBI RefSeq GCF_000248075.1-RS_2025_09_02 2025-09-02 4976 4744 55 na GCF_000248095.2 PRJNA224116 SAMN02470226 na na 1130798 97478 Limosilactobacillus mucosae LM1 strain=LM1 na latest Complete Genome Major Full 2015-03-11 ASM24809v3 chunlab Inc. GCA_000248095.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/095/GCF_000248095.2_ASM24809v3/ na na na haploid bacteria 2434610 2434610 46.000000 2 2 2 NCBI RefSeq GCF_000248095.2-RS_2026_04_05 2026-04-05 2336 2171 120 22887668 GCF_000248155.1 PRJNA224116 SAMN02471588 AIEB00000000.1 na 981333 134533 Acinetobacter parvus DSM 16617 = CIP 108168 strain=DSM 16617 na latest Contig Major Full 2012-02-21 ASM24815v2 University of Birmingham GCA_000248155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/155/GCF_000248155.1_ASM24815v2/ na assembly from type material na haploid bacteria 2878042 2878042 41.500000 0 225 225 NCBI RefSeq GCF_000248155.1-RS_2025_07_24 2025-07-24 3038 2502 89 23259572 GCF_000248375.2 PRJNA224116 SAMN02603747 na na 1074485 1719 Corynebacterium pseudotuberculosis 316 strain=316 na latest Complete Genome Major Full 2019-12-16 ASM24837v2 Rede Paraense de Genomica e Proteomica GCA_000248375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/375/GCF_000248375.2_ASM24837v2/ na na na haploid bacteria 2368850 2368850 52.000000 1 1 1 NCBI RefSeq GCF_000248375.2-RS_2026_04_16 2026-04-16 2164 2059 65 23144380;31705053 GCF_000248395.1 PRJNA224116 SAMN02472011 AHIE00000000.1 na 660596 66269 Pantoea stewartii subsp. stewartii DC283 strain=DC283 na latest Contig Major Full 2012-02-22 ASM24839v2 University of Wisconsin, Madison GCA_000248395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/395/GCF_000248395.1_ASM24839v2/ na na na haploid bacteria 5233214 5233214 54.000000 0 65 65 NCBI RefSeq GCF_000248395.1-RS_2026_04_03 2026-04-03 5389 4904 94 22111898 GCF_000248415.2 PRJNA224116 SAMN02604301 na na 1001542 263 Francisella tularensis subsp. tularensis TIGB03 strain=TIGB03 na latest Complete Genome Minor Full 2018-05-03 ASM24841v2 Virginia Polytechnic Institute and State University GCA_000248415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/415/GCF_000248415.2_ASM24841v2/ na na na haploid bacteria 1968610 1968610 32.500000 1 1 1 NCBI RefSeq GCF_000248415.2-RS_2026_06_11 2026-06-11 2043 1819 53 22535949 GCF_000248435.2 PRJNA224116 SAMN02604300 na na 1001534 263 Francisella tularensis subsp. tularensis TI0902 strain=TI0902 na latest Complete Genome Minor Full 2018-05-03 ASM24843v2 Virginia Polytechnic Institute and State University GCA_000248435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/435/GCF_000248435.2_ASM24843v2/ na na na haploid bacteria 1892857 1892857 32.500000 1 1 1 NCBI RefSeq GCF_000248435.2-RS_2026_03_06 2026-03-06 1952 1731 52 22535949 GCF_000248475.1 PRJNA224116 SAMN02435806 AHVK00000000.1 na 931432 1280 Staphylococcus aureus subsp. aureus CIG1057 strain=CIG1057 na latest Contig Major Full 2012-02-22 ASM24847v2 University of Maryland GCA_000248475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/475/GCF_000248475.1_ASM24847v2/ na na na haploid bacteria 2968765 2968765 33.000000 0 15 15 NCBI RefSeq GCF_000248475.1-RS_2025_08_17 2025-08-17 3003 2831 88 na GCF_000248495.1 PRJNA224116 SAMN00627112 AHKD00000000.1 na 931433 1280 Staphylococcus aureus subsp. aureus CIG1114 strain=StaphylococcusaureusCIG1114 na latest Contig Major Full 2012-02-22 ASM24849v2 University of Maryland GCA_000248495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/495/GCF_000248495.1_ASM24849v2/ na na na haploid bacteria 2939208 2939208 33.000000 0 15 15 NCBI RefSeq GCF_000248495.1-RS_2025_02_04 2025-02-04 2987 2787 89 na GCF_000248515.1 PRJNA224116 SAMN00627114 AHVE00000000.1 na 931434 1280 Staphylococcus aureus subsp. aureus CIG1165 strain=StaphylococcusaureusCIG1165 na latest Contig Major Full 2012-02-22 ASM24851v2 University of Maryland GCA_000248515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/515/GCF_000248515.1_ASM24851v2/ na na na haploid bacteria 2940706 2940706 32.500000 0 16 16 NCBI RefSeq GCF_000248515.1-RS_2025_02_04 2025-02-04 2981 2802 76 na GCF_000248535.1 PRJNA224116 SAMN00627117 AHVM00000000.1 na 931435 1280 Staphylococcus aureus subsp. aureus CIG1214 strain=StaphylococcusaureusCIG1214 na latest Contig Major Full 2012-02-22 ASM24853v2 University of Maryland GCA_000248535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/535/GCF_000248535.1_ASM24853v2/ na na na haploid bacteria 3027776 3027776 33.000000 0 16 16 NCBI RefSeq GCF_000248535.1-RS_2025_02_04 2025-02-04 3078 2851 85 na GCF_000248555.2 PRJNA224116 SAMN00627119 AIEO00000000.1 na 931436 1280 Staphylococcus aureus subsp. aureus CIG1242 strain=CIG1242 na latest Contig Minor Full 2012-02-22 ASM24855v3 University of Maryland GCA_000248555.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/555/GCF_000248555.2_ASM24855v3/ na na na haploid bacteria 3017437 3017437 33.000000 0 54 54 NCBI RefSeq GCF_000248555.2-RS_2025_08_17 2025-08-17 3041 2779 85 na GCF_000248575.1 PRJNA224116 SAMN00627545 AIEP00000000.1 na 931437 1280 Staphylococcus aureus subsp. aureus CIG1500 strain=StaphylococcusaureusCIG1500 na latest Contig Major Full 2012-02-22 ASM24857v2 University of Maryland GCA_000248575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/575/GCF_000248575.1_ASM24857v2/ na na na haploid bacteria 3069467 3069467 33.000000 0 20 20 NCBI RefSeq GCF_000248575.1-RS_2025_02_04 2025-02-04 3108 2873 87 na GCF_000248595.1 PRJNA224116 SAMN00627547 AHKE00000000.1 na 931438 1280 Staphylococcus aureus subsp. aureus CIG1605 strain=StaphylococcusaureusCIG1605 na latest Contig Major Full 2012-02-22 ASM24859v2 University of Maryland GCA_000248595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/595/GCF_000248595.1_ASM24859v2/ na na na haploid bacteria 2974437 2974437 33.000000 0 14 14 NCBI RefSeq GCF_000248595.1-RS_2025_02_04 2025-02-04 2995 2762 88 na GCF_000248615.1 PRJNA224116 SAMN00672560 AHVX00000000.1 na 931439 1280 Staphylococcus aureus subsp. aureus CIG1750 strain=StaphylococcusaureusCIG1750 na latest Contig Major Full 2012-02-22 ASM24861v2 University of Maryland GCA_000248615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/615/GCF_000248615.1_ASM24861v2/ na na na haploid bacteria 2975153 2975153 33.000000 0 43 43 NCBI RefSeq GCF_000248615.1-RS_2025_02_04 2025-02-04 3048 2833 95 na GCF_000248635.1 PRJNA224116 SAMN00627548 AHVG00000000.1 na 931440 1280 Staphylococcus aureus subsp. aureus CIG1769 strain=StaphylococcusaureusCIG1769 na latest Contig Major Full 2012-02-22 ASM24863v2 University of Maryland GCA_000248635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/635/GCF_000248635.1_ASM24863v2/ na na na haploid bacteria 2855112 2855112 33.000000 0 27 27 NCBI RefSeq GCF_000248635.1-RS_2025_02_04 2025-02-04 2889 2715 83 na GCF_000248655.1 PRJNA224116 SAMN00627551 AIEQ00000000.1 na 931441 1280 Staphylococcus aureus subsp. aureus CIG1835 strain=StaphylococcusaureusCIG1835 na latest Contig Major Full 2012-02-22 ASM24865v2 University of Maryland GCA_000248655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/655/GCF_000248655.1_ASM24865v2/ na na na haploid bacteria 2830474 2830474 33.000000 0 12 12 NCBI RefSeq GCF_000248655.1-RS_2025_02_04 2025-02-04 2821 2672 80 na GCF_000248675.1 PRJNA224116 SAMN00627563 AHVQ00000000.1 na 931442 1280 Staphylococcus aureus subsp. aureus CIG547 strain=StaphylococcusaureusCIG547 na latest Contig Major Full 2012-02-22 ASM24867v2 University of Maryland GCA_000248675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/675/GCF_000248675.1_ASM24867v2/ na na na haploid bacteria 2882216 2882216 32.500000 0 12 12 NCBI RefSeq GCF_000248675.1-RS_2025_02_04 2025-02-04 2890 2715 81 na GCF_000248695.1 PRJNA224116 SAMN02435805 AIER00000000.1 na 931443 1280 Staphylococcus aureus subsp. aureus CIG1096 strain=CIG1096 na latest Contig Major Full 2012-02-22 ASM24869v2 University of Maryland GCA_000248695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/695/GCF_000248695.1_ASM24869v2/ na na na haploid bacteria 2908169 2908169 33.000000 0 12 12 NCBI RefSeq GCF_000248695.1-RS_2025_08_18 2025-08-18 2915 2746 83 na GCF_000248715.1 PRJNA224116 SAMN00627113 AHVH00000000.1 na 931444 1280 Staphylococcus aureus subsp. aureus CIG1150 strain=StaphylococcusaureusCIG1150 na latest Contig Major Full 2012-02-22 ASM24871v2 University of Maryland GCA_000248715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/715/GCF_000248715.1_ASM24871v2/ na na na haploid bacteria 2816236 2816236 32.500000 0 40 40 NCBI RefSeq GCF_000248715.1-RS_2025_02_04 2025-02-04 2850 2673 74 na GCF_000248735.1 PRJNA224116 SAMN00627115 AHVJ00000000.1 na 931445 1280 Staphylococcus aureus subsp. aureus CIG1176 strain=StaphylococcusaureusCIG1176 na latest Contig Major Full 2012-02-22 ASM24873v2 University of Maryland GCA_000248735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/735/GCF_000248735.1_ASM24873v2/ na na na haploid bacteria 3025531 3025531 33.000000 0 20 20 NCBI RefSeq GCF_000248735.1-RS_2025_02_04 2025-02-04 3074 2838 82 na GCF_000248755.1 PRJNA224116 SAMN00627116 AHVF00000000.1 na 931446 1280 Staphylococcus aureus subsp. aureus CIG1213 strain=CIG1213 na latest Contig Major Full 2012-02-22 ASM24875v2 University of Maryland GCA_000248755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/755/GCF_000248755.1_ASM24875v2/ na na na haploid bacteria 2936197 2936197 33.000000 0 16 16 NCBI RefSeq GCF_000248755.1-RS_2025_08_17 2025-08-17 2985 2795 88 na GCF_000248775.1 PRJNA224116 SAMN00627118 AHVU00000000.1 na 931447 1280 Staphylococcus aureus subsp. aureus CIG1233 strain=StaphylococcusaureusCIG1233 na latest Contig Major Full 2012-02-22 ASM24877v2 University of Maryland GCA_000248775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/775/GCF_000248775.1_ASM24877v2/ na na na haploid bacteria 2983692 2983692 33.000000 0 14 14 NCBI RefSeq GCF_000248775.1-RS_2025_02_04 2025-02-04 2973 2753 83 na GCF_000248795.1 PRJNA224116 SAMN00627592 AHVW00000000.1 na 931448 1280 Staphylococcus aureus subsp. aureus CIG1612 strain=StaphylococcusaureusCIG1612 na latest Contig Major Full 2012-02-22 ASM24879v2 University of Maryland GCA_000248795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/795/GCF_000248795.1_ASM24879v2/ na na na haploid bacteria 2959192 2959192 33.000000 0 18 18 NCBI RefSeq GCF_000248795.1-RS_2025_02_04 2025-02-04 2989 2799 65 na GCF_000248815.1 PRJNA224116 SAMN00672571 AHVN00000000.1 na 931449 1280 Staphylococcus aureus subsp. aureus CIG1770 strain=StaphylococcusaureusCIG1770 na latest Contig Major Full 2012-02-22 ASM24881v2 University of Maryland GCA_000248815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/815/GCF_000248815.1_ASM24881v2/ na na na haploid bacteria 2937359 2937359 33.000000 0 14 14 NCBI RefSeq GCF_000248815.1-RS_2025_02_04 2025-02-04 2987 2769 90 na GCF_000248835.1 PRJNA224116 SAMN00678219 AHVV00000000.1 na 931450 1280 Staphylococcus aureus subsp. aureus CIG2018 strain=StaphylococcusaureusCIG2018 na latest Contig Major Full 2012-02-22 ASM24883v2 University of Maryland GCA_000248835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/835/GCF_000248835.1_ASM24883v2/ na na na haploid bacteria 2966700 2966700 33.000000 0 18 18 NCBI RefSeq GCF_000248835.1-RS_2025_02_04 2025-02-04 3027 2834 90 na GCF_000248855.1 PRJNA224116 SAMN00627552 AIES00000000.1 na 931451 1280 Staphylococcus aureus subsp. aureus CIG290 strain=StaphylococcusaureusCIG290 na latest Contig Major Full 2012-02-22 ASM24885v2 University of Maryland GCA_000248855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/855/GCF_000248855.1_ASM24885v2/ na na na haploid bacteria 2904780 2904780 33.000000 0 19 19 NCBI RefSeq GCF_000248855.1-RS_2025_02_04 2025-02-04 2888 2705 88 na GCF_000248875.1 PRJNA224116 SAMN00627120 AHVS00000000.1 na 931452 1280 Staphylococcus aureus subsp. aureus CIG1267 strain=StaphylococcusaureusCIG1267 na latest Contig Major Full 2012-02-22 ASM24887v2 University of Maryland GCA_000248875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/875/GCF_000248875.1_ASM24887v2/ na na na haploid bacteria 3004248 3004248 33.000000 0 14 14 NCBI RefSeq GCF_000248875.1-RS_2025_02_04 2025-02-04 3023 2781 87 na GCF_000248895.1 PRJNA224116 SAMN00627544 AHVP00000000.1 na 931453 1280 Staphylococcus aureus subsp. aureus CIG149 strain=StaphylococcusaureusCIG149 na latest Contig Major Full 2012-02-22 ASM24889v2 University of Maryland GCA_000248895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/895/GCF_000248895.1_ASM24889v2/ na na na haploid bacteria 2938720 2938720 33.000000 0 29 29 NCBI RefSeq GCF_000248895.1-RS_2025_02_04 2025-02-04 2960 2734 81 na GCF_000248915.1 PRJNA224116 SAMN00627546 AHVI00000000.1 na 931454 1280 Staphylococcus aureus subsp. aureus CIG1524 strain=StaphylococcusaureusCIG1524 na latest Contig Major Full 2012-02-22 ASM24891v2 University of Maryland GCA_000248915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/915/GCF_000248915.1_ASM24891v2/ na na na haploid bacteria 2751482 2751482 33.000000 0 12 12 NCBI RefSeq GCF_000248915.1-RS_2025_02_04 2025-02-04 2716 2547 85 na GCF_000248935.1 PRJNA224116 SAMN00672572 AHVR00000000.1 na 931455 1280 Staphylococcus aureus subsp. aureus CIGC340D strain=StaphylococcusaureusCIGC340D na latest Contig Major Full 2012-02-22 ASM24893v2 University of Maryland GCA_000248935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/935/GCF_000248935.1_ASM24893v2/ na na na haploid bacteria 2785207 2785207 33.000000 0 9 9 NCBI RefSeq GCF_000248935.1-RS_2025_02_04 2025-02-04 2761 2605 78 na GCF_000248955.1 PRJNA224116 SAMN00627579 AHVL00000000.1 na 931456 1280 Staphylococcus aureus subsp. aureus CIGC341D strain=StaphylococcusaureusCIGC341D na latest Contig Major Full 2012-02-22 ASM24895v2 University of Maryland GCA_000248955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/955/GCF_000248955.1_ASM24895v2/ na na na haploid bacteria 3054526 3054526 33.000000 0 23 23 NCBI RefSeq GCF_000248955.1-RS_2025_02_04 2025-02-04 3124 2881 85 na GCF_000248975.1 PRJNA224116 SAMN00627580 AHVO00000000.1 na 931457 1280 Staphylococcus aureus subsp. aureus CIGC345D strain=StaphylococcusaureusCIGC345D na latest Contig Major Full 2012-02-22 ASM24897v2 University of Maryland GCA_000248975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/975/GCF_000248975.1_ASM24897v2/ na na na haploid bacteria 2808663 2808663 32.500000 0 13 13 NCBI RefSeq GCF_000248975.1-RS_2025_02_04 2025-02-04 2800 2633 80 na GCF_000248995.1 PRJNA224116 SAMN00627581 AHVT00000000.1 na 931458 1280 Staphylococcus aureus subsp. aureus CIGC348 strain=StaphylococcusaureusCIGC348 na latest Contig Major Full 2012-02-22 ASM24899v2 University of Maryland GCA_000248995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/248/995/GCF_000248995.1_ASM24899v2/ na na na haploid bacteria 2930253 2930253 33.000000 0 24 24 NCBI RefSeq GCF_000248995.1-RS_2025_02_04 2025-02-04 2976 2801 82 na GCF_000249015.1 PRJNA224116 SAMN00627578 AHVY00000000.1 na 931459 1280 Staphylococcus aureus subsp. aureus CIGC128 strain=StaphylococcusaureusCIGC128 na latest Contig Major Full 2012-02-22 ASM24901v2 University of Maryland GCA_000249015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/015/GCF_000249015.1_ASM24901v2/ na na na haploid bacteria 2899532 2899532 33.000000 0 42 42 NCBI RefSeq GCF_000249015.1-RS_2025_02_04 2025-02-04 2941 2754 100 na GCF_000249035.1 PRJNA224116 SAMN00627583 AHVD00000000.1 na 931460 1280 Staphylococcus aureus subsp. aureus CIGC93 strain=StaphylococcusaureusCIGC93 na latest Contig Major Full 2012-02-22 ASM24903v2 University of Maryland GCA_000249035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/035/GCF_000249035.1_ASM24903v2/ na na na haploid bacteria 2680536 2680536 33.000000 0 30 30 NCBI RefSeq GCF_000249035.1-RS_2025_02_04 2025-02-04 2646 2484 82 na GCF_000249055.1 PRJNA224116 SAMN00191023 AIEV00000000.1 na 868133 562 Escherichia coli DEC1A strain=DEC1A na latest Contig Major Full 2012-02-23 ASM24905v2 Institute for Genome Sciences GCA_000249055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/055/GCF_000249055.1_ASM24905v2/ na na na haploid bacteria 5108720 5108720 50.500000 0 63 63 NCBI RefSeq GCF_000249055.1-RS_2025_04_26 2025-04-26 5193 4626 141 22582382 GCF_000249095.1 PRJNA224116 SAMN00191020 AIEX00000000.1 na 868135 562 Escherichia coli DEC1C strain=DEC1C na latest Contig Major Full 2012-02-23 ASM24909v2 Institute for Genome Sciences GCA_000249095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/095/GCF_000249095.1_ASM24909v2/ na na na haploid bacteria 5277068 5277068 50.500000 0 81 81 NCBI RefSeq GCF_000249095.1-RS_2025_06_09 2025-06-09 5425 4815 144 22582382 GCF_000249115.1 PRJNA224116 SAMN00191019 AIEY00000000.1 na 868136 562 Escherichia coli DEC1D strain=DEC1D na latest Contig Major Full 2012-02-23 ASM24911v2 Institute for Genome Sciences GCA_000249115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/115/GCF_000249115.1_ASM24911v2/ na na na haploid bacteria 5159414 5159414 50.500000 0 66 66 NCBI RefSeq GCF_000249115.1-RS_2025_06_09 2025-06-09 5317 4711 144 22582382 GCF_000249135.1 PRJNA224116 SAMN00191014 AIEZ00000000.1 na 868137 562 Escherichia coli DEC1E strain=DEC1E na latest Contig Major Full 2012-02-23 ASM24913v2 Institute for Genome Sciences GCA_000249135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/135/GCF_000249135.1_ASM24913v2/ na na na haploid bacteria 5153920 5153920 50.500000 0 50 50 NCBI RefSeq GCF_000249135.1-RS_2025_06_09 2025-06-09 5267 4660 147 22582382 GCF_000249175.1 PRJNA224116 SAMN00191015 AFJB00000000.1 na 868139 562 Escherichia coli DEC2B strain=DEC2B na latest Contig Major Full 2012-02-23 ASM24917v2 Institute for Genome Sciences GCA_000249175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/175/GCF_000249175.1_ASM24917v2/ na na na haploid bacteria 5134451 5134451 50.500000 0 54 54 NCBI RefSeq GCF_000249175.1-RS_2025_06_13 2025-06-13 5223 4637 146 na GCF_000249215.1 PRJNA224116 SAMN00116898 AIFC00000000.1 na 868141 562 Escherichia coli DEC2D strain=DEC2D na latest Contig Major Full 2012-02-23 ASM24921v2 Institute for Genome Sciences GCA_000249215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/215/GCF_000249215.1_ASM24921v2/ na na na haploid bacteria 5094716 5094716 50.500000 0 45 45 NCBI RefSeq GCF_000249215.1-RS_2025_06_09 2025-06-09 5143 4588 139 22582382 GCF_000249255.1 PRJNA224116 SAMN00191000 AIFE00000000.1 na 868143 562 Escherichia coli DEC3A strain=DEC3A na latest Contig Major Full 2012-02-23 ASM24925v2 Institute for Genome Sciences GCA_000249255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/255/GCF_000249255.1_ASM24925v2/ na na na haploid bacteria 5445263 5445263 50.500000 0 61 61 NCBI RefSeq GCF_000249255.1-RS_2025_06_09 2025-06-09 5464 4840 159 22582382 GCF_000249495.1 PRJNA224116 SAMN00191005 AIFQ00000000.1 na 868155 562 Escherichia coli DEC5A strain=DEC5A na latest Contig Major Full 2012-02-23 ASM24949v2 Institute for Genome Sciences GCA_000249495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/495/GCF_000249495.1_ASM24949v2/ na na na haploid bacteria 5371562 5371562 50.500000 0 47 47 NCBI RefSeq GCF_000249495.1-RS_2025_06_09 2025-06-09 5325 4873 129 22582382 GCF_000249515.1 PRJNA224116 SAMN00191006 AIFR00000000.1 na 868156 562 Escherichia coli DEC5B strain=DEC5B na latest Contig Major Full 2012-02-23 ASM24951v2 Institute for Genome Sciences GCA_000249515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/515/GCF_000249515.1_ASM24951v2/ na na na haploid bacteria 5483140 5483140 50.500000 0 73 73 NCBI RefSeq GCF_000249515.1-RS_2025_06_09 2025-06-09 5496 4919 148 22582382 GCF_000249535.1 PRJNA224116 SAMN00191007 AIFS00000000.1 na 868157 562 Escherichia coli DEC5C strain=DEC5C na latest Contig Major Full 2012-02-23 ASM24953v2 Institute for Genome Sciences GCA_000249535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/535/GCF_000249535.1_ASM24953v2/ na na na haploid bacteria 5325581 5325581 50.500000 0 54 54 NCBI RefSeq GCF_000249535.1-RS_2025_06_09 2025-06-09 5313 4843 123 22582382 GCF_000249555.1 PRJNA224116 SAMN00191002 AIFT00000000.1 na 868158 562 Escherichia coli DEC5D strain=DEC5D na latest Contig Major Full 2012-02-23 ASM24955v2 Institute for Genome Sciences GCA_000249555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/555/GCF_000249555.1_ASM24955v2/ na na na haploid bacteria 5231963 5231963 50.500000 0 48 48 NCBI RefSeq GCF_000249555.1-RS_2025_06_09 2025-06-09 5120 4640 124 22582382 GCF_000249575.1 PRJNA224116 SAMN00191021 AIFU00000000.1 na 868159 562 Escherichia coli DEC5E strain=DEC5E na latest Contig Major Full 2012-02-23 ASM24957v2 Institute for Genome Sciences GCA_000249575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/575/GCF_000249575.1_ASM24957v2/ na na na haploid bacteria 5680760 5680760 50.500000 0 49 49 NCBI RefSeq GCF_000249575.1-RS_2025_04_26 2025-04-26 5701 5103 146 22582382 GCF_000249675.1 PRJNA224116 SAMN00190994 AIFZ00000000.1 na 868164 562 Escherichia coli DEC6E strain=DEC6E na latest Contig Major Full 2012-02-23 ASM24967v2 Institute for Genome Sciences GCA_000249675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/675/GCF_000249675.1_ASM24967v2/ na na na haploid bacteria 5076807 5076807 50.500000 0 53 53 NCBI RefSeq GCF_000249675.1-RS_2025_06_08 2025-06-08 5125 4478 153 22582382 GCF_000249695.1 PRJNA224116 SAMN00190992 AIGA00000000.1 na 868165 562 Escherichia coli DEC7A strain=DEC7A na latest Contig Major Full 2012-02-23 ASM24969v2 Institute for Genome Sciences GCA_000249695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/695/GCF_000249695.1_ASM24969v2/ na na na haploid bacteria 5248121 5248121 50.500000 0 64 64 NCBI RefSeq GCF_000249695.1-RS_2026_06_09 2026-06-09 5224 4653 141 22582382 GCF_000249715.1 PRJNA224116 SAMN00190993 AIGB00000000.1 na 868166 562 Escherichia coli DEC7B strain=DEC7B na latest Contig Major Full 2012-02-23 ASM24971v2 Institute for Genome Sciences GCA_000249715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/715/GCF_000249715.1_ASM24971v2/ na na na haploid bacteria 5240824 5240824 50.500000 0 148 148 NCBI RefSeq GCF_000249715.1-RS_2025_06_09 2025-06-09 5271 4747 139 22582382 GCF_000249735.1 PRJNA224116 SAMN00217322 AIGC00000000.1 na 868167 562 Escherichia coli DEC7C strain=DEC7C na latest Contig Major Full 2012-02-23 ASM24973v2 Institute for Genome Sciences GCA_000249735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/735/GCF_000249735.1_ASM24973v2/ na na na haploid bacteria 5308142 5308142 50.500000 0 68 68 NCBI RefSeq GCF_000249735.1-RS_2025_06_09 2025-06-09 5320 4788 153 22582382 GCF_000249755.1 PRJNA224116 SAMN00217323 AIGD00000000.1 na 868168 562 Escherichia coli DEC7D strain=DEC7D na latest Contig Major Full 2012-02-23 ASM24975v2 Institute for Genome Sciences GCA_000249755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/755/GCF_000249755.1_ASM24975v2/ na na na haploid bacteria 5361432 5361432 50.500000 0 48 48 NCBI RefSeq GCF_000249755.1-RS_2025_06_08 2025-06-08 5359 4823 137 22582382 GCF_000249775.1 PRJNA224116 SAMN00190987 AIGE00000000.1 na 868169 562 Escherichia coli DEC7E strain=DEC7E na latest Contig Major Full 2012-02-23 ASM24977v2 Institute for Genome Sciences GCA_000249775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/775/GCF_000249775.1_ASM24977v2/ na na na haploid bacteria 5138978 5138978 50.500000 0 57 57 NCBI RefSeq GCF_000249775.1-RS_2025_04_26 2025-04-26 5075 4564 130 22582382 GCF_000249855.1 PRJNA224116 SAMN00190971 AIGI00000000.1 na 868173 562 Escherichia coli DEC8D strain=DEC8D na latest Contig Major Full 2012-02-23 ASM24985v2 Institute for Genome Sciences GCA_000249855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/855/GCF_000249855.1_ASM24985v2/ na na na haploid bacteria 5460414 5460414 50.500000 0 61 61 NCBI RefSeq GCF_000249855.1-RS_2025_06_08 2025-06-08 5530 4960 148 22582382 GCF_000249895.1 PRJNA224116 SAMN00190967 AIGK00000000.1 na 868175 562 Escherichia coli DEC9A strain=DEC9A na latest Contig Major Full 2012-02-23 ASM24989v2 Institute for Genome Sciences GCA_000249895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/895/GCF_000249895.1_ASM24989v2/ na na na haploid bacteria 5408446 5408446 50.500000 0 80 80 NCBI RefSeq GCF_000249895.1-RS_2025_06_09 2025-06-09 5490 4937 163 22582382 GCF_000249915.1 PRJNA224116 SAMN00190968 AIGL00000000.1 na 868176 562 Escherichia coli DEC9B strain=DEC9B na latest Contig Major Full 2012-02-23 ASM24991v2 Institute for Genome Sciences GCA_000249915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/915/GCF_000249915.1_ASM24991v2/ na na na haploid bacteria 5361604 5361604 50.500000 0 64 64 NCBI RefSeq GCF_000249915.1-RS_2025_06_09 2025-06-09 5425 4901 153 22582382 GCF_000249935.1 PRJNA224116 SAMN00190970 AIGM00000000.1 na 868177 562 Escherichia coli DEC9C strain=DEC9C na latest Contig Major Full 2012-02-23 ASM24993v2 Institute for Genome Sciences GCA_000249935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/935/GCF_000249935.1_ASM24993v2/ na na na haploid bacteria 5194722 5194722 50.500000 0 66 66 NCBI RefSeq GCF_000249935.1-RS_2025_06_08 2025-06-08 5241 4754 141 22582382 GCF_000249955.1 PRJNA224116 SAMN00190986 AIGN00000000.1 na 868178 562 Escherichia coli DEC9D strain=DEC9D na latest Contig Major Full 2012-02-23 ASM24995v2 Institute for Genome Sciences GCA_000249955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/249/955/GCF_000249955.1_ASM24995v2/ na na na haploid bacteria 5485621 5485621 50.500000 0 65 65 NCBI RefSeq GCF_000249955.1-RS_2025_06_09 2025-06-09 5572 5080 153 22582382 GCF_000250115.1 PRJNA224116 SAMN00199323 AIGV00000000.1 na 868186 562 Escherichia coli DEC11A strain=DEC11A na latest Contig Major Full 2012-02-23 ASM25011v2 Institute for Genome Sciences GCA_000250115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/115/GCF_000250115.1_ASM25011v2/ na na na haploid bacteria 5215872 5215872 50.500000 0 56 56 NCBI RefSeq GCF_000250115.1-RS_2025_06_09 2025-06-09 5240 4844 130 22582382 GCF_000250135.1 PRJNA224116 SAMN00199316 AIGW00000000.1 na 868187 562 Escherichia coli DEC11B strain=DEC11B na latest Contig Major Full 2012-02-23 ASM25013v2 Institute for Genome Sciences GCA_000250135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/135/GCF_000250135.1_ASM25013v2/ na na na haploid bacteria 5230874 5230874 50.500000 0 49 49 NCBI RefSeq GCF_000250135.1-RS_2025_06_09 2025-06-09 5281 4907 135 22582382 GCF_000250175.1 PRJNA224116 SAMN00199069 AIGY00000000.1 na 868189 562 Escherichia coli DEC11D strain=DEC11D na latest Contig Major Full 2012-02-23 ASM25017v2 Institute for Genome Sciences GCA_000250175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/175/GCF_000250175.1_ASM25017v2/ na na na haploid bacteria 5304883 5304883 50.500000 0 56 56 NCBI RefSeq GCF_000250175.1-RS_2025_06_09 2025-06-09 5371 4792 149 22582382 GCF_000250215.1 PRJNA224116 SAMN00199081 AIHA00000000.1 na 868191 562 Escherichia coli DEC12A strain=DEC12A na latest Contig Major Full 2012-02-23 ASM25021v2 Institute for Genome Sciences GCA_000250215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/215/GCF_000250215.1_ASM25021v2/ na na na haploid bacteria 5361548 5361548 50.500000 0 81 81 NCBI RefSeq GCF_000250215.1-RS_2025_06_09 2025-06-09 5529 4895 152 22582382 GCF_000250275.1 PRJNA224116 SAMN00222130 AIHD00000000.1 na 868194 562 Escherichia coli DEC12D strain=DEC12D na latest Contig Major Full 2012-02-23 ASM25027v2 Institute for Genome Sciences GCA_000250275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/275/GCF_000250275.1_ASM25027v2/ na na na haploid bacteria 5403985 5403985 50.500000 0 88 88 NCBI RefSeq GCF_000250275.1-RS_2025_04_26 2025-04-26 5621 4959 146 22582382 GCF_000250295.1 PRJNA224116 SAMN00210683 AIHE00000000.1 na 868195 562 Escherichia coli DEC12E strain=DEC12E na latest Contig Major Full 2012-02-23 ASM25029v2 Institute for Genome Sciences GCA_000250295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/295/GCF_000250295.1_ASM25029v2/ na na na haploid bacteria 5296965 5296965 50.500000 0 97 97 NCBI RefSeq GCF_000250295.1-RS_2025_06_09 2025-06-09 5416 4843 143 22582382 GCF_000250315.1 PRJNA224116 SAMN00199317 AIHF00000000.1 na 868196 562 Escherichia coli DEC13A strain=DEC13A na latest Contig Major Full 2012-02-23 ASM25031v2 Institute for Genome Sciences GCA_000250315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/315/GCF_000250315.1_ASM25031v2/ na na na haploid bacteria 4688704 4688704 51.000000 0 37 37 NCBI RefSeq GCF_000250315.1-RS_2025_06_09 2025-06-09 4642 4273 141 22582382 GCF_000250335.1 PRJNA224116 SAMN00199318 AIHG00000000.1 na 868197 562 Escherichia coli DEC13B strain=DEC13B na latest Contig Major Full 2012-02-23 ASM25033v2 Institute for Genome Sciences GCA_000250335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/335/GCF_000250335.1_ASM25033v2/ na na na haploid bacteria 4709936 4709936 50.500000 0 53 53 NCBI RefSeq GCF_000250335.1-RS_2025_06_09 2025-06-09 4688 4337 152 22582382 GCF_000250355.1 PRJNA224116 SAMN00199319 AIHH00000000.1 na 868198 562 Escherichia coli DEC13C strain=DEC13C na latest Contig Major Full 2012-02-23 ASM25035v2 Institute for Genome Sciences GCA_000250355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/355/GCF_000250355.1_ASM25035v2/ na na na haploid bacteria 5294966 5294966 50.500000 0 68 68 NCBI RefSeq GCF_000250355.1-RS_2025_06_09 2025-06-09 5351 4778 149 22582382 GCF_000250375.1 PRJNA224116 SAMN00199321 AIHI00000000.1 na 868199 562 Escherichia coli DEC13D strain=DEC13D na latest Contig Major Full 2012-02-23 ASM25037v2 Institute for Genome Sciences GCA_000250375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/375/GCF_000250375.1_ASM25037v2/ na na na haploid bacteria 5009832 5009832 51.000000 0 42 42 NCBI RefSeq GCF_000250375.1-RS_2025_06_09 2025-06-09 5015 4558 146 22582382 GCF_000250395.1 PRJNA224116 SAMN00199320 AIHJ00000000.1 na 868200 562 Escherichia coli DEC13E strain=DEC13E na latest Contig Major Full 2012-02-23 ASM25039v2 Institute for Genome Sciences GCA_000250395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/395/GCF_000250395.1_ASM25039v2/ na na na haploid bacteria 4979690 4979690 50.500000 0 54 54 NCBI RefSeq GCF_000250395.1-RS_2025_06_09 2025-06-09 4924 4476 134 22582382 GCF_000250475.1 PRJNA224116 SAMN00210678 AIHN00000000.1 na 868204 562 Escherichia coli DEC14D strain=DEC14D na latest Contig Major Full 2012-02-23 ASM25047v2 Institute for Genome Sciences GCA_000250475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/475/GCF_000250475.1_ASM25047v2/ na na na haploid bacteria 5178701 5178701 50.500000 0 76 76 NCBI RefSeq GCF_000250475.1-RS_2025_06_13 2025-06-13 5192 4681 140 22582382 GCF_000250495.1 PRJNA224116 SAMN00210681 AIHO00000000.1 na 868206 562 Escherichia coli DEC15A strain=DEC15A na latest Contig Major Full 2012-02-23 ASM25049v2 Institute for Genome Sciences GCA_000250495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/495/GCF_000250495.1_ASM25049v2/ na na na haploid bacteria 5246096 5246096 50.500000 0 60 60 NCBI RefSeq GCF_000250495.1-RS_2025_04_26 2025-04-26 5242 4725 148 22582382 GCF_000250515.1 PRJNA224116 SAMN00210682 AIHP00000000.1 na 868207 562 Escherichia coli DEC15B strain=DEC15B na latest Contig Major Full 2012-02-23 ASM25051v2 Institute for Genome Sciences GCA_000250515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/515/GCF_000250515.1_ASM25051v2/ na na na haploid bacteria 5264871 5264871 50.500000 0 45 45 NCBI RefSeq GCF_000250515.1-RS_2025_06_09 2025-06-09 5269 4746 151 22582382 GCF_000250535.1 PRJNA224116 SAMN00210684 AIHQ00000000.1 na 868208 562 Escherichia coli DEC15C strain=DEC15C na latest Contig Major Full 2012-02-23 ASM25053v2 Institute for Genome Sciences GCA_000250535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/535/GCF_000250535.1_ASM25053v2/ na na na haploid bacteria 5201291 5201291 50.500000 0 32 32 NCBI RefSeq GCF_000250535.1-RS_2025_06_09 2025-06-09 5169 4696 157 22582382 GCF_000250555.1 PRJNA224116 SAMN00210679 AIHR00000000.1 na 868209 562 Escherichia coli DEC15D strain=DEC15D na latest Contig Major Full 2012-02-23 ASM25055v2 Institute for Genome Sciences GCA_000250555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/555/GCF_000250555.1_ASM25055v2/ na na na haploid bacteria 5210334 5210334 50.500000 0 31 31 NCBI RefSeq GCF_000250555.1-RS_2025_06_13 2025-06-13 5172 4693 146 22582382 GCF_000250615.1 PRJNA224116 SAMN02470566 AHZX00000000.1 na 1136138 296 Pseudomonas fragi B25 strain=B25 na latest Scaffold Major Full 2012-03-09 ASM25061v1 Nanjing Normal University GCA_000250615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/615/GCF_000250615.1_ASM25061v1/ na na na haploid bacteria 5020393 5000569 59.500000 0 11 227 NCBI RefSeq GCF_000250615.1-RS_2026_02_15 2026-02-15 4719 4509 69 22628506 GCF_000250635.1 PRJNA224116 SAMN02602989 na reference genome 984262 1008 Saprospira grandis str. Lewin strain=Lewin na latest Complete Genome Major Full 2012-02-27 ASM25063v1 ASGPB, University of Hawaii at Manoa GCA_000250635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/635/GCF_000250635.1_ASM25063v1/ na na na haploid bacteria 4400185 4400185 46.500000 2 2 2 NCBI RefSeq GCF_000250635.1-RS_2026_05_01 2026-05-01 3442 3365 60 22675601 GCF_000250655.1 PRJNA224116 SAMN02603387 na na 1116391 61624 Paenibacillus mucilaginosus 3016 strain=3016 na latest Complete Genome Major Full 2012-02-27 ASM25065v1 Institute of Agricultural Resources and Regional Planning, GCA_000250655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/655/GCF_000250655.1_ASM25065v1/ na na na haploid bacteria 8739048 8739048 58.500000 1 1 1 NCBI RefSeq GCF_000250655.1-RS_2026_03_28 2026-03-28 7612 7099 221 22535950 GCF_000250675.2 PRJNA224116 SAMN02603853 na na 1133849 37326 Nocardia brasiliensis ATCC 700358 strain=HUJEG-1 na latest Complete Genome Major Full 2012-09-28 ASM25067v3 Servicio de Dermatología, Hospital Universitario, U.A.N.L., Monterrey, N.L., México GCA_000250675.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/675/GCF_000250675.2_ASM25067v3/ na na na haploid bacteria 9436348 9436348 68.000000 1 1 1 NCBI RefSeq GCF_000250675.2-RS_2025_04_18 2025-04-18 8558 8428 62 22535940 GCF_000250715.1 PRJNA224116 SAMN01121066 AEIS00000000.1 na 393119 1639 Listeria monocytogenes FSL J1-208 strain=FSL J1-208 na latest Chromosome Major Full 2012-02-28 ASM25071v1 Food Safety Laboratory, Cornell University GCA_000250715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/715/GCF_000250715.1_ASM25071v1/ na na na haploid bacteria 2854354 2819078 37.500000 2 2 9 NCBI RefSeq GCF_000250715.1-RS_2025_04_15 2025-04-15 2822 2754 36 22247147 GCF_000250735.1 PRJNA224116 SAMN02471584 AHZV00000000.1 na 1144273 177400 Anaerophaga thermohalophila str. Valhall strain=Valhall na latest Contig Major Full 2012-02-28 ASM25073v2 University of Bergen GCA_000250735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/735/GCF_000250735.1_ASM25073v2/ na na na haploid bacteria 4543205 4543205 41.500000 0 371 371 NCBI RefSeq GCF_000250735.1-RS_2025_08_17 2025-08-17 3676 3563 53 na GCF_000250775.1 PRJNA224116 SAMN02469569 AHWB00000000.1 na 1148757 29459 Brucella melitensis S66 strain=S66 na latest Contig Major Full 2012-02-28 ASM25077v2 Chinese PLA Institute for Disease Control and Prevention, Academy of Military Medical Sciences GCA_000250775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/775/GCF_000250775.1_ASM25077v2/ na na na haploid bacteria 3287279 3287279 57.500000 0 73 73 NCBI RefSeq GCF_000250775.1-RS_2026_06_01 2026-06-01 3199 3017 54 22965081 GCF_000250795.1 PRJNA224116 SAMN02469571 AHWC00000000.1 na 224914 29459 Brucella melitensis bv. 1 str. 16M strain=16M na latest Contig Major Full 2012-02-28 ASM25079v2 Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences GCA_000250795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/795/GCF_000250795.1_ASM25079v2/ na assembly from type material na haploid bacteria 3283081 3283081 57.000000 0 75 75 NCBI RefSeq GCF_000250795.1-RS_2026_04_26 2026-04-26 3220 3000 54 22965104 GCF_000250815.1 PRJNA224116 SAMN02469567 AHWD00000000.1 na 1143190 29459 Brucella melitensis 16M1W strain=16M1W na latest Contig Major Full 2012-02-28 ASM25081v2 Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences GCA_000250815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/815/GCF_000250815.1_ASM25081v2/ na na na haploid bacteria 3283366 3283366 57.000000 0 83 83 NCBI RefSeq GCF_000250815.1-RS_2026_04_27 2026-04-27 3226 3003 54 22965104 GCF_000250835.1 PRJNA224116 SAMN02469570 AHWE00000000.1 na 1143191 29459 Brucella melitensis 16M13W strain=16M13W na latest Contig Major Full 2012-02-28 ASM25083v2 Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences GCA_000250835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/835/GCF_000250835.1_ASM25083v2/ na na na haploid bacteria 3259991 3259991 57.000000 0 77 77 NCBI RefSeq GCF_000250835.1-RS_2025_04_14 2025-04-14 3186 2948 55 22965104 GCF_000250855.1 PRJNA224116 SAMN02603415 na na 1134456 666 Vibrio cholerae IEC224 strain=IEC224 na latest Complete Genome Major Full 2012-02-29 ASM25085v1 Instituto Evandro Chagas GCA_000250855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/855/GCF_000250855.1_ASM25085v1/ na na na haploid bacteria 4079586 4079586 47.500000 2 2 2 NCBI RefSeq GCF_000250855.1-RS_2026_04_17 2026-04-17 3766 3583 127 22535947;22662140 GCF_000250875.1 PRJNA224116 SAMN00189160 AFBQ00000000.1 reference genome 762967 437898 Sutterella parvirubra YIT 11816 strain=YIT 11816 na latest Scaffold Major Full 2012-03-01 ASM25087v1 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine GCA_000250875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/875/GCF_000250875.1_ASM25087v1/ na assembly from type material na haploid bacteria 2376899 2368415 65.500000 0 188 391 NCBI RefSeq GCF_000250875.1-RS_2026_05_01 2026-05-01 2169 2033 67 na GCF_000250905.1 PRJNA224116 SAMN02603944 na na 798300 1314 Streptococcus pyogenes MGAS15252 strain=MGAS15252 na latest Complete Genome Major Full 2012-03-01 ASM25090v1 The Methodist Hospital Research Institute GCA_000250905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/905/GCF_000250905.1_ASM25090v1/ na na na haploid bacteria 1750832 1750832 38.500000 1 1 1 NCBI RefSeq GCF_000250905.1-RS_2026_03_28 2026-03-28 1708 1576 76 22330677 GCF_000250925.1 PRJNA224116 SAMN02603945 na na 1010840 1314 Streptococcus pyogenes MGAS1882 strain=MGAS1882 na latest Complete Genome Major Full 2012-03-01 ASM25092v1 The Methodist Hospital Research Institute GCA_000250925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/925/GCF_000250925.1_ASM25092v1/ na na na haploid bacteria 1781029 1781029 38.500000 1 1 1 NCBI RefSeq GCF_000250925.1-RS_2026_01_10 2026-01-10 1744 1608 76 na GCF_000250945.2 PRJNA224116 SAMN02604218 na na 1155766 1352 Enterococcus faecium Aus0004 strain=Aus0004 na latest Complete Genome Major Full 2025-05-16 ASM25094v2 University of Melbourne, Australia GCA_000250945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/945/GCF_000250945.2_ASM25094v2/ na na na haploid bacteria 3027337 3027337 38.500000 5 5 5 NCBI RefSeq GCF_000250945.2-RS_2026_06_26 2026-06-26 3033 2862 93 22366422 GCF_000250985.1 PRJNA242543 SAMN02981274 AEFF00000000.2 reference genome 881290 586133 Nematocida parisii ERTm1 strain=ERTm1 na latest Scaffold Major Full 2012-05-14 Nema_parisii_ERTm1_V3 Broad Institute GCA_000250985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/250/985/GCF_000250985.1_Nema_parisii_ERTm1_V3/ na na na haploid fungi 4071346 4029057 34.500000 0 65 126 Broad Institute Annotation submitted by Broad Institute 2024-01-02 2724 2661 63 na GCF_000251085.2 PRJNA224116 SAMN02604071 na na 1130804 1313 Streptococcus pneumoniae ST556 strain=ST556 na latest Complete Genome Major Full 2015-08-03 ASM25108v2 Tsinghua University GCA_000251085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/085/GCF_000251085.2_ASM25108v2/ na na na haploid bacteria 2150813 2150813 39.500000 1 1 1 NCBI RefSeq GCF_000251085.2-RS_2025_04_02 2025-04-02 2226 1999 73 18670623;22628517 GCF_000251105.1 PRJNA224116 SAMN02603117 na reference genome 1041930 1175444 Methanocella conradii HZ254 strain=HZ254 na latest Complete Genome Major Full 2012-03-07 ASM25110v1 China Agricultural University GCA_000251105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/105/GCF_000251105.1_ASM25110v1/ na assembly from type material na haploid archaea 2378438 2378438 52.500000 1 1 1 NCBI RefSeq GCF_000251105.1-RS_2025_11_21 2025-11-21 2576 2497 59 22493204;22530002;25727385 GCF_000251125.1 PRJNA224116 SAMN02469603 AHKB00000000.1 na 1131257 29385 Staphylococcus saprophyticus subsp. saprophyticus KACC 16562 strain=KACC 16562 na latest Contig Major Full 2012-03-07 ASM25112v2 Chunlab Inc. GCA_000251125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/125/GCF_000251125.1_ASM25112v2/ na na na haploid bacteria 2619936 2619936 33.000000 0 58 58 NCBI RefSeq GCF_000251125.1-RS_2026_03_28 2026-03-28 2663 2499 74 22843581 GCF_000251145.1 PRJNA224116 SAMN02470168 AIDW00000000.1 na 1112213 1112213 Sphingomonas sp. PAMC 26621 strain=PAMC 26621 na latest Contig Major Full 2012-03-07 ASM25114v2 korea Polar Research Institute GCA_000251145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/145/GCF_000251145.1_ASM25114v2/ na na na haploid bacteria 4769930 4769930 65.500000 0 68 68 NCBI RefSeq GCF_000251145.1-RS_2025_08_27 2025-08-27 4585 4354 51 22582384 GCF_000251185.1 PRJNA224116 SAMN02471737 AIEU00000000.1 na 1150862 53407 Pseudomonas fuscovaginae UPB0736 strain=UPB0736 E124 latest Scaffold Major Full 2012-03-13 ASM25118v1 University of Exeter GCA_000251185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/185/GCF_000251185.1_ASM25118v1/ na na na haploid bacteria 6708432 6350233 61.500000 0 102 273 NCBI RefSeq GCF_000251185.1-RS_2026_05_05 2026-05-05 5817 5624 57 22535942 GCF_000251205.1 PRJNA224116 SAMN02469799 AIII00000000.1 na 1151114 529 Brucella anthropi CTS-325 strain=CTS-325 na latest Scaffold Major Full 2012-03-19 ASM25120v1 Fujian Institute of Research on the Structure of Matter, CAS GCA_000251205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/205/GCF_000251205.1_ASM25120v1/ na na na haploid bacteria 4726982 4712978 56.000000 0 15 47 NCBI RefSeq GCF_000251205.1-RS_2026_01_27 2026-01-27 4457 4348 53 20131597 GCF_000251345.1 PRJNA224116 SAMN00632913 AIKM00000000.1 na 760749 1313 Streptococcus pneumoniae GA05248 strain=GA05248 na latest Contig Major Full 2012-03-07 ASM25134v2 Institute for Genome Sciences GCA_000251345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/345/GCF_000251345.1_ASM25134v2/ na na na haploid bacteria 2127842 2127842 40.000000 0 10 10 NCBI RefSeq GCF_000251345.1-RS_2025_07_31 2025-07-31 2227 1959 78 na GCF_000251365.1 PRJNA224116 SAMN00690870 AIKN00000000.1 na 760750 1313 Streptococcus pneumoniae GA06083 strain=GA06083 na latest Contig Major Full 2012-03-07 ASM25136v2 Institute for Genome Sciences GCA_000251365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/365/GCF_000251365.1_ASM25136v2/ na na na haploid bacteria 2104391 2104391 39.500000 0 12 12 NCBI RefSeq GCF_000251365.1-RS_2025_07_31 2025-07-31 2142 1904 75 na GCF_000251385.1 PRJNA224116 SAMN00632920 AIKO00000000.1 na 760756 1313 Streptococcus pneumoniae GA07914 strain=GA07914 na latest Contig Major Full 2012-03-07 ASM25138v2 Institute for Genome Sciences GCA_000251385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/385/GCF_000251385.1_ASM25138v2/ na na na haploid bacteria 2046314 2046314 40.000000 0 8 8 NCBI RefSeq GCF_000251385.1-RS_2025_07_31 2025-07-31 2118 1860 87 na GCF_000251445.1 PRJNA224116 SAMN00690871 AIKP00000000.1 na 760770 1313 Streptococcus pneumoniae GA13430 strain=GA13430 na latest Contig Major Full 2012-03-07 ASM25144v2 Institute for Genome Sciences GCA_000251445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/445/GCF_000251445.1_ASM25144v2/ na na na haploid bacteria 2186233 2186233 39.500000 0 10 10 NCBI RefSeq GCF_000251445.1-RS_2025_07_31 2025-07-31 2229 1978 84 na GCF_000251485.1 PRJNA224116 SAMN00738151 AILN00000000.1 na 760776 1313 Streptococcus pneumoniae GA14373 strain=GA14373 na latest Contig Major Full 2012-03-07 ASM25148v2 Institute for Genome Sciences GCA_000251485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/485/GCF_000251485.1_ASM25148v2/ na na na haploid bacteria 2181002 2181002 39.500000 0 18 18 NCBI RefSeq GCF_000251485.1-RS_2025_07_31 2025-07-31 2273 2005 81 na GCF_000251505.1 PRJNA224116 SAMN00668331 AIKQ00000000.1 na 760777 1313 Streptococcus pneumoniae GA14688 strain=GA14688 na latest Contig Major Full 2012-03-07 ASM25150v2 Institute for Genome Sciences GCA_000251505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/505/GCF_000251505.1_ASM25150v2/ na na na haploid bacteria 2121718 2121718 40.000000 0 15 15 NCBI RefSeq GCF_000251505.1-RS_2025_07_31 2025-07-31 2239 1968 77 na GCF_000251545.1 PRJNA224116 SAMN00738150 AILO00000000.1 na 760792 1313 Streptococcus pneumoniae GA17719 strain=GA17719 na latest Contig Major Full 2012-03-07 ASM25154v2 Institute for Genome Sciences GCA_000251545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/545/GCF_000251545.1_ASM25154v2/ na na na haploid bacteria 2148253 2148253 39.500000 0 12 12 NCBI RefSeq GCF_000251545.1-RS_2025_07_31 2025-07-31 2198 1929 80 na GCF_000251565.1 PRJNA224116 SAMN00717552 AIKR00000000.1 na 760794 1313 Streptococcus pneumoniae GA18068 strain=GA18068 na latest Contig Major Full 2012-03-07 ASM25156v2 Institute for Genome Sciences GCA_000251565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/565/GCF_000251565.1_ASM25156v2/ na na na haploid bacteria 2165361 2165361 39.500000 0 8 8 NCBI RefSeq GCF_000251565.1-RS_2025_07_31 2025-07-31 2226 1964 79 na GCF_000251645.1 PRJNA224116 SAMN00717377 AIJX00000000.1 na 760804 1313 Streptococcus pneumoniae GA40183 strain=GA40183 na latest Contig Major Full 2012-03-07 ASM25164v2 Institute for Genome Sciences GCA_000251645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/645/GCF_000251645.1_ASM25164v2/ na na na haploid bacteria 2139157 2139157 39.500000 0 9 9 NCBI RefSeq GCF_000251645.1-RS_2025_07_31 2025-07-31 2193 1930 76 na GCF_000251705.1 PRJNA224116 SAMN00718935 AIKU00000000.1 na 760816 1313 Streptococcus pneumoniae GA43257 strain=GA43257 na latest Contig Major Full 2012-03-07 ASM25170v2 Institute for Genome Sciences GCA_000251705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/705/GCF_000251705.1_ASM25170v2/ na na na haploid bacteria 2118472 2118472 39.500000 0 11 11 NCBI RefSeq GCF_000251705.1-RS_2025_07_31 2025-07-31 2200 1941 73 na GCF_000251745.1 PRJNA224116 SAMN00632910 AIKV00000000.1 na 760820 1313 Streptococcus pneumoniae GA44128 strain=GA44128 na latest Contig Major Full 2012-03-07 ASM25174v2 Institute for Genome Sciences GCA_000251745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/745/GCF_000251745.1_ASM25174v2/ na na na haploid bacteria 2105822 2105822 39.500000 0 9 9 NCBI RefSeq GCF_000251745.1-RS_2025_07_31 2025-07-31 2212 1952 74 na GCF_000251765.1 PRJNA224116 SAMN00718797 AIKW00000000.1 na 760824 1313 Streptococcus pneumoniae GA44386 strain=GA44386 na latest Contig Major Full 2012-03-07 ASM25176v2 Institute for Genome Sciences GCA_000251765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/765/GCF_000251765.1_ASM25176v2/ na na na haploid bacteria 2185940 2185940 39.500000 0 13 13 NCBI RefSeq GCF_000251765.1-RS_2025_07_31 2025-07-31 2250 1972 86 na GCF_000251785.1 PRJNA224116 SAMN00717565 AIKX00000000.1 na 760829 1313 Streptococcus pneumoniae GA47179 strain=GA47179 na latest Contig Major Full 2012-03-07 ASM25178v2 Institute for Genome Sciences GCA_000251785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/785/GCF_000251785.1_ASM25178v2/ na na na haploid bacteria 2128823 2128823 39.500000 0 14 14 NCBI RefSeq GCF_000251785.1-RS_2025_07_31 2025-07-31 2197 1934 81 na GCF_000251805.1 PRJNA224116 SAMN00718792 AIKY00000000.1 na 760830 1313 Streptococcus pneumoniae GA47210 strain=GA47210 na latest Contig Major Full 2012-03-07 ASM25180v2 Institute for Genome Sciences GCA_000251805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/805/GCF_000251805.1_ASM25180v2/ na na na haploid bacteria 2122377 2122377 39.500000 0 7 7 NCBI RefSeq GCF_000251805.1-RS_2025_07_31 2025-07-31 2190 1955 72 na GCF_000251825.1 PRJNA224116 SAMN00717580 AIKZ00000000.1 na 760838 1313 Streptococcus pneumoniae GA47461 strain=GA47461 na latest Contig Major Full 2012-03-07 ASM25182v2 Institute for Genome Sciences GCA_000251825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/825/GCF_000251825.1_ASM25182v2/ na na na haploid bacteria 2047242 2047242 40.000000 0 7 7 NCBI RefSeq GCF_000251825.1-RS_2025_07_31 2025-07-31 2092 1849 80 na GCF_000251845.1 PRJNA224116 SAMN00632917 AILA00000000.1 na 760840 1313 Streptococcus pneumoniae GA47522 strain=GA47522 na latest Contig Major Full 2012-03-07 ASM25184v2 Institute for Genome Sciences GCA_000251845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/845/GCF_000251845.1_ASM25184v2/ na na na haploid bacteria 2110379 2110379 39.500000 0 11 11 NCBI RefSeq GCF_000251845.1-RS_2025_07_31 2025-07-31 2155 1887 76 na GCF_000251865.1 PRJNA224116 SAMN00668054 AILB00000000.1 na 760842 1313 Streptococcus pneumoniae GA47597 strain=GA47597 na latest Contig Major Full 2012-03-07 ASM25186v2 Institute for Genome Sciences GCA_000251865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/865/GCF_000251865.1_ASM25186v2/ na na na haploid bacteria 2073425 2073425 39.500000 0 10 10 NCBI RefSeq GCF_000251865.1-RS_2025_07_31 2025-07-31 2135 1870 76 na GCF_000251885.1 PRJNA224116 SAMN00718795 AILC00000000.1 na 760843 1313 Streptococcus pneumoniae GA47628 strain=GA47628 na latest Contig Major Full 2012-03-07 ASM25188v2 Institute for Genome Sciences GCA_000251885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/885/GCF_000251885.1_ASM25188v2/ na na na haploid bacteria 2120267 2120267 40.000000 0 12 12 NCBI RefSeq GCF_000251885.1-RS_2025_07_31 2025-07-31 2192 1939 84 na GCF_000251905.1 PRJNA224116 SAMN00632918 AILD00000000.1 na 760846 1313 Streptococcus pneumoniae GA47760 strain=GA47760 na latest Contig Major Full 2012-03-07 ASM25190v2 Institute for Genome Sciences GCA_000251905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/905/GCF_000251905.1_ASM25190v2/ na na na haploid bacteria 2023877 2023877 40.000000 0 14 14 NCBI RefSeq GCF_000251905.1-RS_2025_07_31 2025-07-31 2088 1847 73 na GCF_000251925.1 PRJNA224116 SAMN00738292 AILQ00000000.1 na 760848 1313 Streptococcus pneumoniae GA47794 strain=GA47794 na latest Contig Major Full 2012-03-07 ASM25192v2 Institute for Genome Sciences GCA_000251925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/925/GCF_000251925.1_ASM25192v2/ na na na haploid bacteria 2104244 2104244 39.500000 0 9 9 NCBI RefSeq GCF_000251925.1-RS_2025_07_31 2025-07-31 2164 1909 81 na GCF_000251945.1 PRJNA224116 SAMN00718785 AILE00000000.1 na 760852 1313 Streptococcus pneumoniae GA49194 strain=GA49194 na latest Contig Major Full 2012-03-07 ASM25194v2 Institute for Genome Sciences GCA_000251945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/945/GCF_000251945.1_ASM25194v2/ na na na haploid bacteria 2093149 2093149 39.500000 0 4 4 NCBI RefSeq GCF_000251945.1-RS_2025_07_31 2025-07-31 2149 1901 81 na GCF_000251965.1 PRJNA224116 SAMN00632919 AILF00000000.1 na 760855 1313 Streptococcus pneumoniae GA49542 strain=GA49542 na latest Contig Major Full 2012-03-07 ASM25196v2 Institute for Genome Sciences GCA_000251965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/965/GCF_000251965.1_ASM25196v2/ na na na haploid bacteria 2145249 2145249 39.500000 0 9 9 NCBI RefSeq GCF_000251965.1-RS_2025_07_31 2025-07-31 2227 1963 77 na GCF_000251985.1 PRJNA224116 SAMN00691436 AIJY00000000.1 na 760867 1313 Streptococcus pneumoniae 8190-05 strain=8190-05 na latest Contig Major Full 2012-03-07 ASM25198v2 Institute for Genome Sciences GCA_000251985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/251/985/GCF_000251985.1_ASM25198v2/ na na na haploid bacteria 2069738 2069738 40.000000 0 32 32 NCBI RefSeq GCF_000251985.1-RS_2025_07_31 2025-07-31 2152 1886 71 na GCF_000252025.1 PRJNA224116 SAMN00630315 AIJU00000000.1 na 760871 1313 Streptococcus pneumoniae 5652-06 strain=5652-06 na latest Contig Major Full 2012-03-07 ASM25202v2 Institute for Genome Sciences GCA_000252025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/025/GCF_000252025.1_ASM25202v2/ na na na haploid bacteria 2080889 2080889 40.000000 0 13 13 NCBI RefSeq GCF_000252025.1-RS_2025_07_31 2025-07-31 2139 1890 76 na GCF_000252065.1 PRJNA224116 SAMN00632922 AIKE00000000.1 na 760873 1313 Streptococcus pneumoniae 4075-00 strain=4075-00 na latest Contig Major Full 2012-03-07 ASM25206v2 Institute for Genome Sciences GCA_000252065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/065/GCF_000252065.1_ASM25206v2/ na na na haploid bacteria 2084867 2084867 40.000000 0 8 8 NCBI RefSeq GCF_000252065.1-RS_2025_07_31 2025-07-31 2143 1890 79 na GCF_000252085.1 PRJNA224116 SAMN00632921 AIKF00000000.1 na 760878 1313 Streptococcus pneumoniae EU-NP02 strain=EU-NP02 na latest Contig Major Full 2012-03-07 ASM25208v2 Institute for Genome Sciences GCA_000252085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/085/GCF_000252085.1_ASM25208v2/ na na na haploid bacteria 2110309 2110309 40.000000 0 13 13 NCBI RefSeq GCF_000252085.1-RS_2025_07_31 2025-07-31 2181 1921 78 na GCF_000252105.1 PRJNA224116 SAMN00632911 AIKG00000000.1 na 760879 1313 Streptococcus pneumoniae EU-NP03 strain=EU-NP03 na latest Contig Major Full 2012-03-07 ASM25210v2 Institute for Genome Sciences GCA_000252105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/105/GCF_000252105.1_ASM25210v2/ na na na haploid bacteria 2111371 2111371 39.500000 0 10 10 NCBI RefSeq GCF_000252105.1-RS_2025_07_31 2025-07-31 2160 1892 80 na GCF_000252125.1 PRJNA224116 SAMN02471905 AHKF00000000.1 na 1086011 229204 Flavobacterium frigoris PS1 strain=PS1 na latest Contig Major Full 2012-03-08 ASM25212v2 University of Nevada Las Vegas GCA_000252125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/125/GCF_000252125.1_ASM25212v2/ na na na haploid bacteria 3934101 3934101 34.500000 0 52 52 NCBI RefSeq GCF_000252125.1-RS_2025_01_08 2025-01-08 3425 3343 52 24699650 GCF_000252165.1 PRJNA224116 SAMD00036606 BAET00000000.1 na 1121923 56804 Glaciecola punicea ACAM 611 strain=ACAM 611 na latest Contig Major Full 2012-03-07 ASM25216v2 Shandong University GCA_000252165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/165/GCF_000252165.1_ASM25216v2/ na assembly from type material na haploid bacteria 3076861 3076861 43.000000 0 35 35 NCBI RefSeq GCF_000252165.1-RS_2025_08_08 2025-08-08 2765 2663 52 22628500;25009843 GCF_000252185.1 PRJNA224116 SAMN00723186 AILK00000000.1 na 1069628 1313 Streptococcus pneumoniae GA08825 strain=GA08825 na latest Contig Major Full 2012-03-07 ASM25218v2 Institute for Genome Sciences GCA_000252185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/185/GCF_000252185.1_ASM25218v2/ na na na haploid bacteria 2103417 2103417 40.000000 0 10 10 NCBI RefSeq GCF_000252185.1-RS_2025_07_31 2025-07-31 2169 1915 80 na GCF_000252205.1 PRJNA224116 SAMN00722746 AILJ00000000.1 na 1069626 1313 Streptococcus pneumoniae GA02506 strain=GA02506 na latest Contig Major Full 2012-03-07 ASM25220v2 Institute for Genome Sciences GCA_000252205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/205/GCF_000252205.1_ASM25220v2/ na na na haploid bacteria 2049637 2049637 40.000000 0 8 8 NCBI RefSeq GCF_000252205.1-RS_2025_07_31 2025-07-31 2118 1862 85 na GCF_000252225.1 PRJNA224116 SAMN00718798 AILI00000000.1 na 1069625 1313 Streptococcus pneumoniae England14-9 strain=England14-9 na latest Contig Major Full 2012-03-07 ASM25222v2 Institute for Genome Sciences GCA_000252225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/225/GCF_000252225.1_ASM25222v2/ na na na haploid bacteria 2087621 2087621 39.500000 0 8 8 NCBI RefSeq GCF_000252225.1-RS_2025_07_31 2025-07-31 2125 1882 71 na GCF_000252245.1 PRJNA224116 SAMN00722745 AILH00000000.1 na 1069623 1313 Streptococcus pneumoniae GA05578 strain=GA05578 na latest Contig Major Full 2012-03-07 ASM25224v2 Institute for Genome Sciences GCA_000252245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/245/GCF_000252245.1_ASM25224v2/ na na na haploid bacteria 2107559 2107559 40.000000 0 7 7 NCBI RefSeq GCF_000252245.1-RS_2025_07_31 2025-07-31 2196 1963 70 na GCF_000252265.1 PRJNA224116 SAMN00721740 AILG00000000.1 na 760883 1313 Streptococcus pneumoniae NP141 strain=NP141 na latest Contig Major Full 2012-03-07 ASM25226v2 Institute for Genome Sciences GCA_000252265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/265/GCF_000252265.1_ASM25226v2/ na na na haploid bacteria 2056675 2056675 40.000000 0 9 9 NCBI RefSeq GCF_000252265.1-RS_2025_07_31 2025-07-31 2103 1835 78 na GCF_000252305.1 PRJNA224116 SAMN00632907 AIKH00000000.1 na 760880 1313 Streptococcus pneumoniae EU-NP04 strain=EU-NP04 na latest Contig Major Full 2012-03-07 ASM25230v2 Institute for Genome Sciences GCA_000252305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/305/GCF_000252305.1_ASM25230v2/ na na na haploid bacteria 2123188 2123188 40.000000 0 12 12 NCBI RefSeq GCF_000252305.1-RS_2025_07_31 2025-07-31 2199 1914 85 na GCF_000252365.1 PRJNA224116 SAMN02603557 na na 1105109 35794 Rickettsia slovaca str. D-CWPP strain=D-CWPP na latest Complete Genome Major Full 2012-03-09 ASM25236v1 Los Alamos National Laboratory GCA_000252365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/365/GCF_000252365.1_ASM25236v1/ na na na haploid bacteria 1275720 1275720 32.500000 1 1 1 NCBI RefSeq GCF_000252365.1-RS_2026_01_08 2026-01-08 1475 1338 40 na GCF_000252385.1 PRJNA224116 SAMN02469319 AIJP00000000.1 na 1136877 1747 Cutibacterium acnes PRP-38 strain=PRP-38 na latest Contig Major Full 2012-03-09 ASM25238v2 BAYGEN GCA_000252385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/385/GCF_000252385.1_ASM25238v2/ na na na haploid bacteria 2507426 2507426 60.000000 0 12 12 NCBI RefSeq GCF_000252385.1-RS_2026_03_28 2026-03-28 2434 2264 58 22628495 GCF_000252405.1 PRJNA224116 SAMN02469651 AIDT00000000.1 na 1155079 1280 Staphylococcus aureus subsp. aureus DR10 strain=DR10 na latest Contig Major Full 2012-03-12 ASM25240v2 Integrated Genomics GCA_000252405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/405/GCF_000252405.1_ASM25240v2/ na na na haploid bacteria 2725515 2725515 33.000000 0 44 44 NCBI RefSeq GCF_000252405.1-RS_2025_02_07 2025-02-07 2738 2586 64 22375071 GCF_000252445.1 PRJNA224116 SAMN02603039 na reference genome 745776 502394 Deinococcus gobiensis I-0 strain=I-0 na latest Complete Genome Major Full 2012-03-12 ASM25244v1 Biotechnology Research Institute, the Chinese Academy of Agricultural Sciences GCA_000252445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/445/GCF_000252445.1_ASM25244v1/ na assembly from type material na haploid bacteria 4406036 4406036 69.000000 7 7 7 NCBI RefSeq GCF_000252445.1-RS_2026_03_30 2026-03-30 4338 4207 65 22470573 GCF_000252625.1 PRJNA224116 SAMN00794682 AGUG00000000.1 na 1081736 1069827 Listeria fleischmannii subsp. coloradonensis strain=TTU M1-001 na latest Contig Major Full 2012-03-14 ASM25262v2 Cornell University GCA_000252625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/625/GCF_000252625.1_ASM25262v2/ na assembly from type material na haploid bacteria 2817512 2817512 38.500000 0 406 406 NCBI RefSeq GCF_000252625.1-RS_2026_03_31 2026-03-31 2942 2610 33 23524352 GCF_000252805.1 PRJNA224116 SAMN02471695 AJFG00000000.1 na 1144302 562 Escherichia coli SCI-07 strain=SCI-07 na latest Contig Major Full 2012-03-14 ASM25280v2 UNICAMP GCA_000252805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/805/GCF_000252805.1_ASM25280v2/ na na na haploid bacteria 4972327 4972327 50.500000 0 68 68 NCBI RefSeq GCF_000252805.1-RS_2025_06_14 2025-06-14 4851 4565 65 22582380 GCF_000252835.1 PRJNA224116 SAMN02471718 AIJQ00000000.1 na 456163 456163 Thermus parvatiensis strain=RL na latest Contig Major Full 2012-03-15 ASM25283v2 University of Delhi GCA_000252835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/835/GCF_000252835.1_ASM25283v2/ na assembly from type material na haploid bacteria 2036600 2036600 68.500000 0 17 17 NCBI RefSeq GCF_000252835.1-RS_2026_02_06 2026-02-06 2281 1902 59 22689228 GCF_000252855.1 PRJNA224116 SAMN02602991 na na 693978 34085 Riemerella anatipestifer ATCC 11845 = DSM 15868 strain=ATCC 11845 na latest Complete Genome Major Full 2012-03-15 ASM25285v1 Avian Disease Centre of the College of Veterinary Medicine, Sichuan Agricultural University GCA_000252855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/855/GCF_000252855.1_ASM25285v1/ na assembly from type material na haploid bacteria 2164087 2164087 35.000000 1 1 1 NCBI RefSeq GCF_000252855.1-RS_2025_12_03 2025-12-03 2064 1995 49 22628503 GCF_000252875.1 PRJNA224116 SAMN02604223 na na 1008297 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 strain=798 na latest Complete Genome Major Full 2012-03-15 ASM25287v1 University of Minnesota GCA_000252875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/875/GCF_000252875.1_ASM25287v1/ na na na haploid bacteria 4970096 4970096 52.000000 2 2 2 NCBI RefSeq GCF_000252875.1-RS_2025_05_23 2025-05-23 4871 4575 116 22937065 GCF_000252895.1 PRJNA224116 SAMN02469698 AGNM00000000.1 na 1086030 623 Shigella flexneri 5a str. M90T strain=M90T na latest Chromosome Major Full 2012-04-06 ASM25289v1 Dalhousie University GCA_000252895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/895/GCF_000252895.1_ASM25289v1/ na na na haploid bacteria 4580866 4568966 51.000000 1 1 120 NCBI RefSeq GCF_000252895.1-RS_2025_07_19 2025-07-19 4733 3942 128 22582379 GCF_000252915.2 PRJNA224116 SAMN02471877 AIEM00000000.1 na 1134455 571 Klebsiella oxytoca 11492-1 strain=11492-1 na latest Contig Minor Full 2012-03-16 Ko11492-1_1.0 Institute for Genome Science GCA_000252915.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/915/GCF_000252915.2_Ko11492-1_1.0/ na na na haploid bacteria 6171098 6171098 55.000000 0 212 212 NCBI RefSeq GCF_000252915.2-RS_2026_03_21 2026-03-21 5974 5757 84 22582383 GCF_000252955.1 PRJNA224116 SAMEA3138407 na reference genome 406817 628 Xenorhabdus nematophila ATCC 19061 strain=ATCC 19061 na latest Chromosome Major Full 2010-06-07 ASM25295v1 Danforth Science Center GCA_000252955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/955/GCF_000252955.1_ASM25295v1/ na assembly from type material na haploid bacteria 4587917 4587841 44.000000 2 2 4 NCBI RefSeq GCF_000252955.1-RS_2026_03_30 2026-03-30 4243 3738 106 22125637 GCF_000252975.1 PRJNA224116 SAMEA3138408 na na 881621 1638 Listeria ivanovii subsp. ivanovii PAM 55 strain=PAM 55 na latest Complete Genome Major Full 2011-09-15 ASM25297v1 Institut Pasteur GCA_000252975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/975/GCF_000252975.1_ASM25297v1/ na assembly designated as clade exemplar na haploid bacteria 2928879 2928879 37.000000 1 1 1 NCBI RefSeq GCF_000252975.1-RS_2026_02_10 2026-02-10 2915 2739 89 22072644 GCF_000252995.1 PRJNA224116 SAMEA3138409 na reference genome 218493 54736 Salmonella bongori NCTC 12419 strain=NCTC 12419 na latest Complete Genome Major Full 2011-07-06 ASM25299v1 Sanger Institute GCA_000252995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/995/GCF_000252995.1_ASM25299v1/ na assembly from type material na haploid bacteria 4460105 4460105 51.500000 1 1 1 NCBI RefSeq GCF_000252995.1-RS_2025_12_10 2025-12-10 4236 3984 117 21876672 GCF_000253015.1 PRJNA224116 SAMEA2272739 na reference genome 696125 56426 Bartonella clarridgeiae 73 strain=73 na latest Complete Genome Major Full 2011-01-17 ASM25301v1 Focal area Infection Biology, Biozentrum, University of Basel, Switzerland GCA_000253015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/015/GCF_000253015.1_ASM25301v1/ na na na haploid bacteria 1522743 1522743 35.500000 1 1 1 NCBI RefSeq GCF_000253015.1-RS_2025_07_15 2025-07-15 1287 1196 51 21347280 GCF_000253035.1 PRJNA224116 SAMEA2272163 na reference genome 765952 83552 Parachlamydia acanthamoebae UV-7 strain=UV-7 na latest Complete Genome Major Full 2011-06-21 ASM25303v1 University of Vienna, Dept. of Microbial Ecology GCA_000253035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/035/GCF_000253035.1_ASM25303v1/ na na na haploid bacteria 3072383 3072383 39.000000 1 1 1 NCBI RefSeq GCF_000253035.1-RS_2025_12_13 2025-12-13 2643 2527 53 21690563 GCF_000253055.1 PRJNA224116 SAMEA2272453 na reference genome 768679 2271 Thermoproteus tenax Kra 1 strain=Kra 1 na latest Complete Genome Major Full 2011-10-06 ASM25305v1 University of Duisburg-Essen, Faculty of Chemistry, Molecular Enzyme Technology and Biochemistry GCA_000253055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/055/GCF_000253055.1_ASM25305v1/ na assembly from type material na haploid archaea 1841542 1841542 55.000000 1 1 1 NCBI RefSeq GCF_000253055.1-RS_2026_03_30 2026-03-30 2125 2051 49 22003381 GCF_000253075.1 PRJNA224116 SAMEA2272808 na na 862259 2102 Mycoplasma mycoides subsp. capri LC str. 95010 strain=95010 na latest Complete Genome Major Full 2011-04-12 ASM25307v1 Genoscope GCA_000253075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/075/GCF_000253075.1_ASM25307v1/ na na na haploid bacteria 1155838 1155838 24.000000 2 2 2 NCBI RefSeq GCF_000253075.1-RS_2026_02_26 2026-02-26 978 925 39 21324191 GCF_000253095.1 PRJNA224116 SAMEA2272153 na na 866629 2105 Mycoplasma leachii 99/014/6 strain=99/014/6 na latest Chromosome Major Full 2011-07-04 ASM25309v1 Swiss Institute of Bioinformatics (Vital-IT) GCA_000253095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/095/GCF_000253095.1_ASM25309v1/ na na na haploid bacteria 1017232 1016732 23.500000 1 1 6 NCBI RefSeq GCF_000253095.1-RS_2026_02_26 2026-02-26 922 853 39 na GCF_000253115.1 PRJNA224116 SAMEA2272520 na reference genome 426114 426114 Thiomonas arsenitoxydans strain=3As na latest Chromosome Major Full 2010-04-07 ASM25311v1 Génétique Moléculaire, Génomique et Microbiologie UMR 7156 ULP - CNRS Université Louis Pasteur GCA_000253115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/115/GCF_000253115.1_ASM25311v1/ na assembly from type material na haploid bacteria 3785534 3777700 64.000000 2 2 3 NCBI RefSeq GCF_000253115.1-RS_2025_12_11 2025-12-11 3659 3537 50 na GCF_000253135.1 PRJNA224116 SAMEA2271964 na na 889933 1280 Staphylococcus aureus subsp. aureus ECT-R 2 na ECT-R 2 latest Complete Genome Major Full 2010-11-24 ASM25313v1 The Norwegian High-Throughput Sequencing Centre GCA_000253135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/135/GCF_000253135.1_ASM25313v1/ na na na haploid bacteria 2759052 2759052 33.000000 3 3 3 NCBI RefSeq GCF_000253135.1-RS_2025_08_25 2025-08-25 2728 2581 79 21590357 GCF_000253155.1 PRJNA224116 SAMEA2272261 na na 927666 1303 Streptococcus oralis Uo5 strain=Uo5 na latest Complete Genome Major Full 2011-03-23 ASM25315v1 Nano+Bio Center, University of Kaiserslautern GCA_000253155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/155/GCF_000253155.1_ASM25315v1/ na na na haploid bacteria 1958690 1958690 41.000000 1 1 1 NCBI RefSeq GCF_000253155.1-RS_2026_02_16 2026-02-16 1952 1819 76 21460080 GCF_000253175.1 PRJNA224116 SAMEA2271938 na reference genome 930944 630 Yersinia enterocolitica subsp. palearctica Y11 strain=Y11 na latest Complete Genome Major Full 2011-01-20 ASM25317v1 Max von Pettenkofer-Institute GCA_000253175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/175/GCF_000253175.1_ASM25317v1/ na assembly from type material na haploid bacteria 4625880 4625880 47.000000 2 2 2 NCBI RefSeq GCF_000253175.1-RS_2025_12_20 2025-12-20 4241 3902 100 21296963 GCF_000253195.1 PRJNA224116 SAMEA2272270 na na 941968 1491 Clostridium botulinum H04402 065 strain=H04402 065 na latest Complete Genome Major Full 2011-02-08 ASM25319v1 The Institute of Food Research, Norwich GCA_000253195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/195/GCF_000253195.1_ASM25319v1/ na na na haploid bacteria 3919740 3919740 28.000000 1 1 1 NCBI RefSeq GCF_000253195.1-RS_2026_04_27 2026-04-27 3688 3381 103 21378191 GCF_000253215.1 PRJNA224116 SAMEA2272690 na na 942513 487 Neisseria meningitidis WUE 2594 strain=WUE 2594 na latest Complete Genome Major Full 2011-01-17 ASM25321v1 Bielefeld Univeristy - Center for Biotechnology (CeBiTec) GCA_000253215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/215/GCF_000253215.1_ASM25321v1/ na na na haploid bacteria 2227255 2227255 52.000000 1 1 1 NCBI RefSeq GCF_000253215.1-RS_2026_02_16 2026-02-16 2268 1998 71 21296965 GCF_000253235.1 PRJNA224116 SAMEA3138410 na na 953739 54571 Streptomyces venezuelae ATCC 10712 strain=ATCC 10712 na latest Chromosome Major Full 2011-04-13 ASM25323v1 John Innes Centre GCA_000253235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/235/GCF_000253235.1_ASM25323v1/ na assembly from type material na haploid bacteria 8226158 8217299 72.500000 1 1 114 NCBI RefSeq GCF_000253235.1-RS_2026_01_15 2026-01-15 7485 7239 84 21463507 GCF_000253255.1 PRJNA224116 SAMEA2272572 na na 702113 702113 Novosphingobium sp. PP1Y strain=PP1Y na latest Complete Genome Major Full 2011-05-24 ASM25325v1 Ceinge Biotecnologie Avanzate GCA_000253255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/255/GCF_000253255.1_ASM25325v1/ na na na haploid bacteria 5313905 5313905 63.500000 4 4 4 NCBI RefSeq GCF_000253255.1-RS_2024_08_13 2024-08-13 4953 4805 70 21685292 GCF_000253275.1 PRJNA224116 SAMEA3138411 na reference genome 1034807 55197 Flavobacterium branchiophilum FL-15 strain=FL-15 na latest Complete Genome Major Full 2011-09-06 ASM25327v1 Institut National de la Recherche Agronomique (INRA) GCA_000253275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/275/GCF_000253275.1_ASM25327v1/ na na na haploid bacteria 3563292 3563292 33.000000 2 2 2 NCBI RefSeq GCF_000253275.1-RS_2026_03_30 2026-03-30 3075 2988 56 21926215 GCF_000253295.1 PRJNA224116 SAMEA3138412 na na 717785 717785 Hyphomicrobium sp. MC1 strain=MC1 na latest Complete Genome Major Full 2011-06-24 ASM25329v1 Genoscope GCA_000253295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/295/GCF_000253295.1_ASM25329v1/ na na na haploid bacteria 4757528 4757528 59.000000 1 1 1 NCBI RefSeq GCF_000253295.1-RS_2024_08_22 2024-08-22 4554 4463 56 na GCF_000253315.1 PRJNA224116 SAMEA2272047 na reference genome 347253 1304 Streptococcus salivarius JIM8777 strain=JIM8777 na latest Complete Genome Major Full 2011-06-27 ASM25331v1 Institut National de la Recherche Agronomique (INRA) GCA_000253315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/315/GCF_000253315.1_ASM25331v1/ na na na haploid bacteria 2210574 2210574 40.000000 1 1 1 NCBI RefSeq GCF_000253315.1-RS_2025_12_11 2025-12-11 2055 1936 90 21742871 GCF_000253335.1 PRJNA224116 SAMEA2272545 na na 1048332 1304 Streptococcus salivarius CCHSS3 strain=CCHSS3 na latest Complete Genome Major Full 2011-06-27 ASM25333v1 Institut National de la Recherche Agronomique (INRA) GCA_000253335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/335/GCF_000253335.1_ASM25333v1/ na na na haploid bacteria 2217184 2217184 40.000000 1 1 1 NCBI RefSeq GCF_000253335.1-RS_2026_02_10 2026-02-10 2099 1947 90 na GCF_000253355.1 PRJNA224116 SAMEA2272165 na na 572418 1773 Mycobacterium tuberculosis variant africanum GM041182 strain=GM041182 na latest Complete Genome Major Full 2011-07-05 ASM25335v1 Wellcome Trust Sanger Insititute GCA_000253355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/355/GCF_000253355.1_ASM25335v1/ na na na haploid bacteria 4389314 4389314 65.500000 1 1 1 NCBI RefSeq GCF_000253355.1-RS_2025_05_21 2025-05-21 4130 3857 51 22389744 GCF_000253375.1 PRJNA224116 SAMEA2272660 na reference genome 1048245 78331 Mycobacterium canetti CIPT 140010059 strain=CIPT 140010059 na latest Complete Genome Major Full 2011-07-14 ASM25337v1 Wellcome Trust Sanger Insititute GCA_000253375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/375/GCF_000253375.1_ASM25337v1/ na na na haploid bacteria 4482059 4482059 65.500000 1 1 1 NCBI RefSeq GCF_000253375.1-RS_2025_12_16 2025-12-16 4205 3932 51 22389744;23291586 GCF_000253395.1 PRJNA224116 SAMEA2272807 na na 1051074 1308 Streptococcus thermophilus JIM 8232 strain=JIM 8232 na latest Complete Genome Major Full 2011-07-04 ASM25339v1 Institut National de la Recherche Agronomique (INRA) GCA_000253395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/395/GCF_000253395.1_ASM25339v1/ na na na haploid bacteria 1929905 1929905 39.000000 1 1 1 NCBI RefSeq GCF_000253395.1-RS_2026_02_10 2026-02-10 1978 1669 89 na GCF_000253415.1 PRJNA224116 SAMN02428935 AIMI00000000.1 na 887280 195 Campylobacter coli 111-3 strain=111-3 na latest Contig Major Full 2012-03-16 ASM25341v2 Cornell University GCA_000253415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/415/GCF_000253415.1_ASM25341v2/ na na na haploid bacteria 1709586 1709586 31.000000 0 122 122 NCBI RefSeq GCF_000253415.1-RS_2025_04_15 2025-04-15 1842 1727 39 23279811 GCF_000253435.1 PRJNA224116 SAMN02428936 AIMJ00000000.1 na 887286 195 Campylobacter coli 90-3 strain=90-3 na latest Contig Major Full 2012-03-16 ASM25343v2 Cornell University GCA_000253435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/435/GCF_000253435.1_ASM25343v2/ na na na haploid bacteria 1765378 1765378 31.000000 0 121 121 NCBI RefSeq GCF_000253435.1-RS_2026_03_28 2026-03-28 1920 1805 37 23279811 GCF_000253455.1 PRJNA224116 SAMN02429053 AIMK00000000.1 na 887314 195 Campylobacter coli Z163 strain=Z163 na latest Contig Major Full 2012-03-16 ASM25345v2 Cornell University GCA_000253455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/455/GCF_000253455.1_ASM25345v2/ na na na haploid bacteria 1677293 1677293 31.500000 0 105 105 NCBI RefSeq GCF_000253455.1-RS_2025_07_31 2025-07-31 1813 1703 40 na GCF_000253495.1 PRJNA224116 SAMN02428967 AIMM00000000.1 na 887316 195 Campylobacter coli 2553 strain=2553 na latest Contig Major Full 2012-03-16 ASM25349v2 Cornell University GCA_000253495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/495/GCF_000253495.1_ASM25349v2/ na na na haploid bacteria 1825665 1825665 31.000000 0 208 208 NCBI RefSeq GCF_000253495.1-RS_2026_06_21 2026-06-21 1980 1858 32 23279811 GCF_000253515.1 PRJNA224116 SAMN02429055 AIMN00000000.1 na 887317 195 Campylobacter coli 2680 strain=2680 na latest Contig Major Full 2012-03-16 ASM25351v2 Cornell University GCA_000253515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/515/GCF_000253515.1_ASM25351v2/ na na na haploid bacteria 1696901 1696901 31.500000 0 128 128 NCBI RefSeq GCF_000253515.1-RS_2025_07_31 2025-07-31 1858 1739 38 na GCF_000253535.1 PRJNA224116 SAMN02429056 AIMO00000000.1 na 887318 195 Campylobacter coli 2685 strain=2685 na latest Contig Major Full 2012-03-16 ASM25353v2 Cornell University GCA_000253535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/535/GCF_000253535.1_ASM25353v2/ na na na haploid bacteria 1713585 1713585 31.500000 0 103 103 NCBI RefSeq GCF_000253535.1-RS_2025_07_31 2025-07-31 1851 1754 39 na GCF_000253555.1 PRJNA224116 SAMN02429017 AIMP00000000.1 na 887319 195 Campylobacter coli 2688 strain=2688 na latest Contig Major Full 2012-03-16 ASM25355v2 Cornell University GCA_000253555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/555/GCF_000253555.1_ASM25355v2/ na na na haploid bacteria 1744090 1744090 31.500000 0 209 209 NCBI RefSeq GCF_000253555.1-RS_2025_07_31 2025-07-31 1951 1804 34 na GCF_000253615.1 PRJNA224116 SAMN02428937 AIMS00000000.1 na 887287 195 Campylobacter coli 84-2 strain=84-2 na latest Contig Major Full 2012-03-16 ASM25361v2 Cornell University GCA_000253615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/615/GCF_000253615.1_ASM25361v2/ na na na haploid bacteria 1605339 1605339 31.500000 0 99 99 NCBI RefSeq GCF_000253615.1-RS_2025_07_31 2025-07-31 1709 1611 35 na GCF_000253635.1 PRJNA224116 SAMN02429019 AIMT00000000.1 na 887288 195 Campylobacter coli 80352 strain=80352 na latest Contig Major Full 2012-03-16 ASM25363v2 Cornell University GCA_000253635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/635/GCF_000253635.1_ASM25363v2/ na na na haploid bacteria 1918861 1918861 31.000000 0 260 260 NCBI RefSeq GCF_000253635.1-RS_2025_07_31 2025-07-31 2113 1972 37 na GCF_000253655.1 PRJNA224116 SAMN02428969 AIMU00000000.1 na 887289 195 Campylobacter coli 86119 strain=86119 na latest Contig Major Full 2012-03-16 ASM25365v2 Cornell University GCA_000253655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/655/GCF_000253655.1_ASM25365v2/ na na na haploid bacteria 1736982 1736982 31.500000 0 120 120 NCBI RefSeq GCF_000253655.1-RS_2025_07_31 2025-07-31 1883 1787 35 na GCF_000253675.1 PRJNA224116 SAMN02429020 AIMV00000000.1 na 887290 195 Campylobacter coli 1091 strain=1091 na latest Contig Major Full 2012-03-16 ASM25367v2 Cornell University GCA_000253675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/675/GCF_000253675.1_ASM25367v2/ na na na haploid bacteria 1654672 1654672 31.500000 0 132 132 NCBI RefSeq GCF_000253675.1-RS_2025_07_31 2025-07-31 1772 1669 35 na GCF_000253695.1 PRJNA224116 SAMN02428970 AIMW00000000.1 na 887291 195 Campylobacter coli 1098 strain=1098 na latest Contig Major Full 2012-03-16 ASM25369v2 Cornell University GCA_000253695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/695/GCF_000253695.1_ASM25369v2/ na na na haploid bacteria 1740626 1740626 31.500000 0 126 126 NCBI RefSeq GCF_000253695.1-RS_2025_07_31 2025-07-31 1877 1753 34 na GCF_000253715.1 PRJNA224116 SAMN02428971 AIMX00000000.1 na 887292 195 Campylobacter coli 1148 strain=1148 na latest Contig Major Full 2012-03-16 ASM25371v2 Campylobacter coli 1148 GCA_000253715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/715/GCF_000253715.1_ASM25371v2/ na na na haploid bacteria 1703486 1703486 31.000000 0 113 113 NCBI RefSeq GCF_000253715.1-RS_2025_07_31 2025-07-31 1815 1722 35 na GCF_000253735.1 PRJNA224116 SAMN02429057 AIMY00000000.1 na 887293 195 Campylobacter coli 1417 strain=1417 na latest Contig Major Full 2012-03-16 ASM25373v2 Cornell University GCA_000253735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/735/GCF_000253735.1_ASM25373v2/ na na na haploid bacteria 1731356 1731356 31.500000 0 97 97 NCBI RefSeq GCF_000253735.1-RS_2025_07_31 2025-07-31 1891 1776 38 na GCF_000253815.2 PRJNA224116 SAMN02428938 AINC00000000.1 na 887295 195 Campylobacter coli 1909 strain=1909 na latest Contig Minor Full 2012-03-16 ASM25381v3 Cornell University GCA_000253815.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/815/GCF_000253815.2_ASM25381v3/ na na na haploid bacteria 1700554 1700554 31.500000 0 132 132 NCBI RefSeq GCF_000253815.2-RS_2025_08_22 2025-08-22 1824 1719 35 na GCF_000253835.1 PRJNA224116 SAMN02429022 AIND00000000.1 na 887283 195 Campylobacter coli 59-2 strain=59-2 na latest Contig Major Full 2012-03-16 ASM25383v2 Cornell University GCA_000253835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/835/GCF_000253835.1_ASM25383v2/ na na na haploid bacteria 1763010 1763010 31.000000 0 140 140 NCBI RefSeq GCF_000253835.1-RS_2025_07_31 2025-07-31 1923 1795 38 na GCF_000253855.2 PRJNA224116 SAMN02429060 AINE00000000.1 na 887296 195 Campylobacter coli 1948 strain=1948 na latest Contig Minor Full 2012-03-16 ASM25385v3 Cornell University GCA_000253855.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/855/GCF_000253855.2_ASM25385v3/ na na na haploid bacteria 1618428 1618428 31.500000 0 104 104 NCBI RefSeq GCF_000253855.2-RS_2025_08_22 2025-08-22 1733 1639 38 na GCF_000253875.1 PRJNA224116 SAMN02429001 AINF00000000.1 na 887297 195 Campylobacter coli 1957 strain=1957 na latest Contig Major Full 2012-03-16 ASM25387v2 Cornell University GCA_000253875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/875/GCF_000253875.1_ASM25387v2/ na na na haploid bacteria 1735394 1735394 31.500000 0 123 123 NCBI RefSeq GCF_000253875.1-RS_2025_07_31 2025-07-31 1884 1779 37 na GCF_000253895.2 PRJNA224116 SAMN02428972 AING00000000.1 na 887298 195 Campylobacter coli 1961 strain=1961 na latest Contig Minor Full 2012-03-16 ASM25389v3 Cornell University GCA_000253895.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/895/GCF_000253895.2_ASM25389v3/ na na na haploid bacteria 1728167 1728167 31.000000 0 127 127 NCBI RefSeq GCF_000253895.2-RS_2025_08_22 2025-08-22 1855 1744 36 na GCF_000253915.1 PRJNA224116 SAMN02428939 AINH00000000.1 na 887299 195 Campylobacter coli 202/04 strain=202/04 na latest Contig Major Full 2012-03-16 ASM25391v2 Cornell University GCA_000253915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/915/GCF_000253915.1_ASM25391v2/ na na na haploid bacteria 1675391 1675391 31.500000 0 104 104 NCBI RefSeq GCF_000253915.1-RS_2025_07_31 2025-07-31 1794 1696 35 na GCF_000253955.2 PRJNA224116 SAMN02428940 AINJ00000000.1 na 887300 195 Campylobacter coli 317/04 strain=317/04 na latest Contig Minor Full 2012-03-16 ASM25395v3 Cornell University GCA_000253955.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/955/GCF_000253955.2_ASM25395v3/ na na na haploid bacteria 1747801 1747801 31.000000 0 132 132 NCBI RefSeq GCF_000253955.2-RS_2025_08_22 2025-08-22 1901 1775 35 na GCF_000253975.1 PRJNA224116 SAMN02428973 AINK00000000.1 na 887301 195 Campylobacter coli 37/05 strain=37/05 na latest Contig Major Full 2012-03-16 ASM25397v2 Cornell University GCA_000253975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/975/GCF_000253975.1_ASM25397v2/ na na na haploid bacteria 1710249 1710249 31.500000 0 122 122 NCBI RefSeq GCF_000253975.1-RS_2025_07_31 2025-07-31 1879 1763 35 na GCF_000253995.1 PRJNA224116 SAMN02428941 AINL00000000.1 na 887302 195 Campylobacter coli LMG 9854 strain=LMG 9854 na latest Contig Major Full 2012-03-16 ASM25399v2 Cornell University GCA_000253995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/253/995/GCF_000253995.1_ASM25399v2/ na na na haploid bacteria 1715684 1715684 31.500000 0 118 118 NCBI RefSeq GCF_000253995.1-RS_2025_07_31 2025-07-31 1830 1739 35 na GCF_000254015.1 PRJNA224116 SAMN02429062 AINM00000000.1 na 887303 195 Campylobacter coli LMG 23336 strain=LMG 23336 na latest Contig Major Full 2012-03-16 ASM25401v2 Cornell University GCA_000254015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/015/GCF_000254015.1_ASM25401v2/ na na na haploid bacteria 1648169 1648169 31.500000 0 120 120 NCBI RefSeq GCF_000254015.1-RS_2025_07_31 2025-07-31 1766 1665 35 na GCF_000254035.1 PRJNA224116 SAMN02429002 AINN00000000.1 na 887304 195 Campylobacter coli LMG 23341 strain=LMG 23341 na latest Contig Major Full 2012-03-16 ASM25403v2 Cornell University GCA_000254035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/035/GCF_000254035.1_ASM25403v2/ na na na haploid bacteria 1617023 1617023 31.500000 0 118 118 NCBI RefSeq GCF_000254035.1-RS_2025_07_31 2025-07-31 1742 1647 35 na GCF_000254055.1 PRJNA224116 SAMN02428942 AINO00000000.1 na 887305 195 Campylobacter coli LMG 23342 strain=LMG 23342 na latest Contig Major Full 2012-03-16 ASM25405v2 Cornell University GCA_000254055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/055/GCF_000254055.1_ASM25405v2/ na na na haploid bacteria 1616549 1616549 31.500000 0 109 109 NCBI RefSeq GCF_000254055.1-RS_2025_07_31 2025-07-31 1733 1638 35 na GCF_000254075.1 PRJNA224116 SAMN02428974 AINP00000000.1 na 887306 195 Campylobacter coli LMG 23344 strain=LMG 23344 na latest Contig Major Full 2012-03-16 ASM25407v2 Cornell University GCA_000254075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/075/GCF_000254075.1_ASM25407v2/ na na na haploid bacteria 1784159 1784159 31.000000 0 192 192 NCBI RefSeq GCF_000254075.1-RS_2025_07_31 2025-07-31 1942 1818 37 na GCF_000254095.1 PRJNA224116 SAMN02428943 AINQ00000000.1 na 887285 195 Campylobacter coli 151-9 strain=151-9 na latest Contig Major Full 2012-03-16 ASM25409v2 Cornell University GCA_000254095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/095/GCF_000254095.1_ASM25409v2/ na na na haploid bacteria 1680317 1680317 31.500000 0 107 107 NCBI RefSeq GCF_000254095.1-RS_2025_07_31 2025-07-31 1795 1688 37 na GCF_000254115.1 PRJNA224116 SAMN02429063 AINR00000000.1 na 887307 195 Campylobacter coli LMG 9853 strain=LMG 9853 na latest Contig Major Full 2012-03-16 ASM25411v2 Cornell University GCA_000254115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/115/GCF_000254115.1_ASM25411v2/ na na na haploid bacteria 1666318 1666318 31.500000 0 85 85 NCBI RefSeq GCF_000254115.1-RS_2025_07_31 2025-07-31 1754 1672 35 na GCF_000254135.1 PRJNA224116 SAMN02428959 AINS00000000.1 na 887308 195 Campylobacter coli LMG 9860 strain=LMG 9860 na latest Contig Major Full 2012-03-16 ASM25413v2 Cornell University GCA_000254135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/135/GCF_000254135.1_ASM25413v2/ na assembly from type material na haploid bacteria 1851478 1851478 31.000000 0 187 187 NCBI RefSeq GCF_000254135.1-RS_2026_03_20 2026-03-20 2050 1924 35 na GCF_000254175.1 PRJNA224116 SAMN02428960 AINU00000000.1 na 887310 195 Campylobacter coli H8 strain=H8 na latest Contig Major Full 2012-03-16 ASM25417v2 Cornell University GCA_000254175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/175/GCF_000254175.1_ASM25417v2/ na na na haploid bacteria 1798181 1798181 31.000000 0 191 191 NCBI RefSeq GCF_000254175.1-RS_2025_07_31 2025-07-31 1957 1807 35 na GCF_000254195.1 PRJNA224116 SAMN02429003 AINV00000000.1 na 887311 195 Campylobacter coli H9 strain=H9 na latest Contig Major Full 2012-03-16 ASM25419v2 Cornell University GCA_000254195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/195/GCF_000254195.1_ASM25419v2/ na na na haploid bacteria 1603498 1603498 31.500000 0 91 91 NCBI RefSeq GCF_000254195.1-RS_2025_07_31 2025-07-31 1704 1616 33 na GCF_000254215.1 PRJNA224116 SAMN02429065 AINW00000000.1 na 887312 195 Campylobacter coli H56 strain=H56 na latest Contig Major Full 2012-03-16 ASM25421v2 Cornell University GCA_000254215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/215/GCF_000254215.1_ASM25421v2/ na na na haploid bacteria 1736886 1736886 31.500000 0 134 134 NCBI RefSeq GCF_000254215.1-RS_2025_07_31 2025-07-31 1883 1761 35 na GCF_000254235.1 PRJNA224116 SAMN02429004 AINX00000000.1 na 887313 195 Campylobacter coli Z156 strain=Z156 na latest Contig Major Full 2012-03-16 ASM25423v2 Cornell University GCA_000254235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/235/GCF_000254235.1_ASM25423v2/ na na na haploid bacteria 1686229 1686229 31.500000 0 87 87 NCBI RefSeq GCF_000254235.1-RS_2025_07_31 2025-07-31 1815 1709 42 na GCF_000254255.1 PRJNA224116 SAMN02429066 AINY00000000.1 na 889213 197 Campylobacter jejuni subsp. jejuni 129-258 strain=129-258 na latest Contig Major Full 2012-03-16 ASM25425v2 Cornell University GCA_000254255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/255/GCF_000254255.1_ASM25425v2/ na na na haploid bacteria 1608162 1608162 30.500000 0 102 102 NCBI RefSeq GCF_000254255.1-RS_2025_06_29 2025-06-29 1709 1590 38 na GCF_000254275.1 PRJNA224116 SAMN02429005 AINZ00000000.1 na 889216 197 Campylobacter jejuni subsp. jejuni 51494 strain=51494 na latest Contig Major Full 2012-03-16 ASM25427v2 Cornell University GCA_000254275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/275/GCF_000254275.1_ASM25427v2/ na na na haploid bacteria 1803640 1803640 30.000000 0 215 215 NCBI RefSeq GCF_000254275.1-RS_2025_06_27 2025-06-27 2012 1830 39 na GCF_000254315.1 PRJNA224116 SAMN02429006 AIOB00000000.1 na 889240 197 Campylobacter jejuni subsp. jejuni LMG 23218 strain=LMG 23218 na latest Contig Major Full 2012-03-16 ASM25431v2 Cornell University GCA_000254315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/315/GCF_000254315.1_ASM25431v2/ na na na haploid bacteria 1678928 1678928 30.500000 0 106 106 NCBI RefSeq GCF_000254315.1-RS_2025_06_27 2025-06-27 1787 1661 39 na GCF_000254335.1 PRJNA224116 SAMN02428945 AIOC00000000.1 na 889241 197 Campylobacter jejuni subsp. jejuni LMG 23223 strain=LMG 23223 na latest Contig Major Full 2012-03-16 ASM25433v2 Cornell University GCA_000254335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/335/GCF_000254335.1_ASM25433v2/ na na na haploid bacteria 1632500 1632500 30.500000 0 105 105 NCBI RefSeq GCF_000254335.1-RS_2025_06_28 2025-06-28 1763 1600 39 na GCF_000254355.1 PRJNA224116 SAMN02429044 AIOD00000000.1 na 889242 197 Campylobacter jejuni subsp. jejuni LMG 23263 strain=LMG 23263 na latest Contig Major Full 2012-03-16 ASM25435v2 Cornell University GCA_000254355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/355/GCF_000254355.1_ASM25435v2/ na na na haploid bacteria 1744709 1744709 30.500000 0 172 172 NCBI RefSeq GCF_000254355.1-RS_2025_06_27 2025-06-27 1927 1754 39 na GCF_000254375.1 PRJNA224116 SAMN02429007 AIOE00000000.1 na 889217 197 Campylobacter jejuni subsp. jejuni 60004 strain=60004 na latest Contig Major Full 2012-03-16 ASM25437v2 Cornell University GCA_000254375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/375/GCF_000254375.1_ASM25437v2/ na na na haploid bacteria 1675414 1675414 30.500000 0 143 143 NCBI RefSeq GCF_000254375.1-RS_2025_06_27 2025-06-27 1812 1675 39 na GCF_000254395.1 PRJNA224116 SAMN02429008 AIOF00000000.1 na 889243 197 Campylobacter jejuni subsp. jejuni LMG 23264 strain=LMG 23264 na latest Contig Major Full 2012-03-16 ASM25439v2 Cornell University GCA_000254395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/395/GCF_000254395.1_ASM25439v2/ na na na haploid bacteria 1720846 1720846 30.500000 0 147 147 NCBI RefSeq GCF_000254395.1-RS_2025_07_09 2025-07-09 1897 1746 39 na GCF_000254415.1 PRJNA224116 SAMN02428961 AIOG00000000.1 na 889244 197 Campylobacter jejuni subsp. jejuni LMG 23269 strain=LMG 23269 na latest Contig Major Full 2012-03-16 ASM25441v2 Cornell University GCA_000254415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/415/GCF_000254415.1_ASM25441v2/ na na na haploid bacteria 1628395 1628395 30.500000 0 124 124 NCBI RefSeq GCF_000254415.1-RS_2025_06_28 2025-06-28 1776 1641 38 na GCF_000254435.1 PRJNA224116 SAMN02429009 AIOH00000000.1 na 889218 197 Campylobacter jejuni subsp. jejuni 55037 strain=55037 na latest Contig Major Full 2012-03-16 ASM25443v2 Cornell University GCA_000254435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/435/GCF_000254435.1_ASM25443v2/ na na na haploid bacteria 1589716 1589716 30.500000 0 104 104 NCBI RefSeq GCF_000254435.1-RS_2025_06_27 2025-06-27 1696 1580 39 na GCF_000254455.1 PRJNA224116 SAMN02429010 AIOI00000000.1 na 889245 197 Campylobacter jejuni subsp. jejuni LMG 9879 strain=LMG 9879 na latest Contig Major Full 2012-03-16 ASM25445v2 Cornell University GCA_000254455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/455/GCF_000254455.1_ASM25445v2/ na na na haploid bacteria 1650812 1650812 30.500000 0 129 129 NCBI RefSeq GCF_000254455.1-RS_2025_06_29 2025-06-29 1798 1676 39 na GCF_000254475.1 PRJNA224116 SAMN02429045 AIOJ00000000.1 na 889219 197 Campylobacter jejuni subsp. jejuni 86605 strain=86605 na latest Contig Major Full 2012-03-16 ASM25447v2 Cornell University GCA_000254475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/475/GCF_000254475.1_ASM25447v2/ na na na haploid bacteria 1638403 1638403 30.500000 0 120 120 NCBI RefSeq GCF_000254475.1-RS_2025_06_27 2025-06-27 1749 1626 39 na GCF_000254495.1 PRJNA224116 SAMN02428946 AIOK00000000.1 na 889246 197 Campylobacter jejuni subsp. jejuni LMG 23357 strain=LMG 23357 na latest Contig Major Full 2012-03-16 ASM25449v2 Cornell University GCA_000254495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/495/GCF_000254495.1_ASM25449v2/ na na na haploid bacteria 1672858 1672858 30.500000 0 126 126 NCBI RefSeq GCF_000254495.1-RS_2025_07_09 2025-07-09 1816 1684 39 na GCF_000254515.1 PRJNA224116 SAMN02428947 AIOL00000000.1 na 889247 197 Campylobacter jejuni subsp. jejuni ATCC 33560 strain=ATCC 33560 na latest Contig Major Full 2012-03-16 ASM25451v2 Cornell University GCA_000254515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/515/GCF_000254515.1_ASM25451v2/ na assembly from type material na haploid bacteria 1712461 1712461 30.000000 0 220 220 NCBI RefSeq GCF_000254515.1-RS_2025_06_27 2025-06-27 1874 1670 38 na GCF_000254535.1 PRJNA224116 SAMN02429011 AIOM00000000.1 na 889248 197 Campylobacter jejuni subsp. jejuni LMG 9081 strain=LMG 9081 na latest Contig Major Full 2012-03-16 ASM25453v2 Cornell University GCA_000254535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/535/GCF_000254535.1_ASM25453v2/ na na na haploid bacteria 1593841 1593841 30.500000 0 108 108 NCBI RefSeq GCF_000254535.1-RS_2025_06_27 2025-06-27 1705 1584 39 na GCF_000254555.1 PRJNA224116 SAMN02429012 AION00000000.1 na 889220 197 Campylobacter jejuni subsp. jejuni 53161 strain=53161 na latest Contig Major Full 2012-03-16 ASM25455v2 Cornell University GCA_000254555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/555/GCF_000254555.1_ASM25455v2/ na na na haploid bacteria 1562744 1562744 30.500000 0 123 123 NCBI RefSeq GCF_000254555.1-RS_2025_06_29 2025-06-29 1719 1558 40 na GCF_000254575.1 PRJNA224116 SAMN02428962 AIOO00000000.1 na 889249 197 Campylobacter jejuni subsp. jejuni LMG 9217 strain=LMG 9217 na latest Contig Major Full 2012-03-16 ASM25457v2 Cornell University GCA_000254575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/575/GCF_000254575.1_ASM25457v2/ na na na haploid bacteria 1653445 1653445 30.500000 0 118 118 NCBI RefSeq GCF_000254575.1-RS_2025_06_27 2025-06-27 1809 1679 39 na GCF_000254595.1 PRJNA224116 SAMN02429046 AIOP00000000.1 na 889250 197 Campylobacter jejuni subsp. jejuni 2008-1025 strain=2008-1025 na latest Contig Major Full 2012-03-16 ASM25459v2 Cornell University GCA_000254595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/595/GCF_000254595.1_ASM25459v2/ na na na haploid bacteria 1661042 1661042 30.500000 0 139 139 NCBI RefSeq GCF_000254595.1-RS_2025_07_09 2025-07-09 1813 1681 39 na GCF_000254615.1 PRJNA224116 SAMN02429047 AIOQ00000000.1 na 889251 197 Campylobacter jejuni subsp. jejuni 2008-894 strain=2008-894 na latest Contig Major Full 2012-03-16 ASM25461v2 Cornell University GCA_000254615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/615/GCF_000254615.1_ASM25461v2/ na na na haploid bacteria 1627929 1627929 30.500000 0 116 116 NCBI RefSeq GCF_000254615.1-RS_2025_06_27 2025-06-27 1753 1623 39 na GCF_000254635.1 PRJNA224116 SAMN02428948 AIOR00000000.1 na 889252 197 Campylobacter jejuni subsp. jejuni 2008-872 strain=2008-872 na latest Contig Major Full 2012-03-16 ASM25463v2 Cornell University GCA_000254635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/635/GCF_000254635.1_ASM25463v2/ na na na haploid bacteria 1602313 1602313 30.500000 0 114 114 NCBI RefSeq GCF_000254635.1-RS_2025_06_29 2025-06-29 1715 1588 39 na GCF_000254655.1 PRJNA224116 SAMN02428949 AIOS00000000.1 na 889253 197 Campylobacter jejuni subsp. jejuni 2008-988 strain=2008-988 na latest Contig Major Full 2012-03-16 ASM25465v2 Cornell University GCA_000254655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/655/GCF_000254655.1_ASM25465v2/ na na na haploid bacteria 1820783 1820783 30.000000 0 206 206 NCBI RefSeq GCF_000254655.1-RS_2025_06_29 2025-06-29 2017 1865 39 na GCF_000254675.1 PRJNA224116 SAMN02428963 AIOT00000000.1 na 889221 197 Campylobacter jejuni subsp. jejuni 1997-1 strain=1997-1 na latest Contig Major Full 2012-03-16 ASM25467v2 Cornell University GCA_000254675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/675/GCF_000254675.1_ASM25467v2/ na na na haploid bacteria 1604303 1604303 30.500000 0 112 112 NCBI RefSeq GCF_000254675.1-RS_2025_06_28 2025-06-28 1734 1590 39 na GCF_000254695.1 PRJNA224116 SAMN02428950 AIOU00000000.1 na 889254 197 Campylobacter jejuni subsp. jejuni 2008-979 strain=2008-979 na latest Contig Major Full 2012-03-16 ASM25469v2 Cornell University GCA_000254695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/695/GCF_000254695.1_ASM25469v2/ na na na haploid bacteria 1798433 1798433 30.000000 0 217 217 NCBI RefSeq GCF_000254695.1-RS_2025_07_09 2025-07-09 2023 1824 37 na GCF_000254715.1 PRJNA224116 SAMN02429048 AIOV00000000.1 na 889255 197 Campylobacter jejuni subsp. jejuni 2008-831 strain=2008-831 na latest Contig Major Full 2012-03-16 ASM25471v2 Cornell University GCA_000254715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/715/GCF_000254715.1_ASM25471v2/ na na na haploid bacteria 1609412 1609412 30.500000 0 120 120 NCBI RefSeq GCF_000254715.1-RS_2025_06_28 2025-06-28 1731 1606 39 na GCF_000254735.1 PRJNA224116 SAMN02429049 AIOW00000000.1 na 889222 197 Campylobacter jejuni subsp. jejuni 1997-4 strain=1997-4 na latest Contig Major Full 2012-03-16 ASM25473v2 Cornell University GCA_000254735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/735/GCF_000254735.1_ASM25473v2/ na na na haploid bacteria 1670223 1670223 30.500000 0 129 129 NCBI RefSeq GCF_000254735.1-RS_2025_06_29 2025-06-29 1785 1663 39 na GCF_000254755.1 PRJNA224116 SAMN02429050 AIOX00000000.1 na 889223 197 Campylobacter jejuni subsp. jejuni 1997-7 strain=1997-7 na latest Contig Major Full 2012-03-16 ASM25475v2 Cornell University GCA_000254755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/755/GCF_000254755.1_ASM25475v2/ na na na haploid bacteria 1589764 1589764 30.500000 0 76 76 NCBI RefSeq GCF_000254755.1-RS_2025_06_29 2025-06-29 1695 1584 38 na GCF_000254775.1 PRJNA224116 SAMN02429013 AIOY00000000.1 na 889224 197 Campylobacter jejuni subsp. jejuni 1997-10 strain=1997-10 na latest Contig Major Full 2012-03-16 ASM25477v2 Cornell University GCA_000254775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/775/GCF_000254775.1_ASM25477v2/ na na na haploid bacteria 1780746 1780746 30.000000 0 193 193 NCBI RefSeq GCF_000254775.1-RS_2025_06_28 2025-06-28 1964 1799 37 na GCF_000254795.1 PRJNA224116 SAMN02429014 AIOZ00000000.1 na 889225 197 Campylobacter jejuni subsp. jejuni 1997-11 strain=1997-11 na latest Contig Major Full 2012-03-16 ASM25479v2 Cornell University GCA_000254795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/795/GCF_000254795.1_ASM25479v2/ na na na haploid bacteria 1601760 1601760 30.500000 0 115 115 NCBI RefSeq GCF_000254795.1-RS_2025_06_29 2025-06-29 1714 1605 39 na GCF_000254815.1 PRJNA224116 SAMN02429015 AIPA00000000.1 na 889226 197 Campylobacter jejuni subsp. jejuni 1997-14 strain=1997-14 na latest Contig Major Full 2012-03-16 ASM25481v2 Cornell University GCA_000254815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/815/GCF_000254815.1_ASM25481v2/ na na na haploid bacteria 1766943 1766943 30.500000 0 196 196 NCBI RefSeq GCF_000254815.1-RS_2025_06_27 2025-06-27 1966 1795 39 na GCF_000254835.1 PRJNA224116 SAMN02429016 AIPB00000000.1 na 889227 197 Campylobacter jejuni subsp. jejuni 51037 strain=51037 na latest Contig Major Full 2012-03-16 ASM25483v2 Cornell University GCA_000254835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/835/GCF_000254835.1_ASM25483v2/ na na na haploid bacteria 1747358 1747358 30.000000 0 207 207 NCBI RefSeq GCF_000254835.1-RS_2025_06_28 2025-06-28 1926 1739 39 na GCF_000254855.1 PRJNA224116 SAMN02428995 AIPC00000000.1 na 889214 197 Campylobacter jejuni subsp. jejuni 110-21 strain=110-21 na latest Contig Major Full 2012-03-16 ASM25485v2 Cornell University GCA_000254855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/855/GCF_000254855.1_ASM25485v2/ na na na haploid bacteria 1619234 1619234 30.500000 0 113 113 NCBI RefSeq GCF_000254855.1-RS_2025_06_27 2025-06-27 1745 1617 40 na GCF_000254875.1 PRJNA224116 SAMN02428964 AIPD00000000.1 na 889228 197 Campylobacter jejuni subsp. jejuni 87330 strain=87330 na latest Contig Major Full 2012-03-16 ASM25487v2 Cornell University GCA_000254875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/875/GCF_000254875.1_ASM25487v2/ na na na haploid bacteria 1610401 1610401 30.500000 0 107 107 NCBI RefSeq GCF_000254875.1-RS_2025_06_27 2025-06-27 1736 1613 40 na GCF_000254895.1 PRJNA224116 SAMN02428951 AIPE00000000.1 na 889229 197 Campylobacter jejuni subsp. jejuni 87459 strain=87459 na latest Contig Major Full 2012-03-16 ASM25489v2 Cornell University GCA_000254895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/895/GCF_000254895.1_ASM25489v2/ na na na haploid bacteria 1727997 1727997 30.500000 0 201 201 NCBI RefSeq GCF_000254895.1-RS_2025_06_27 2025-06-27 1927 1757 39 na GCF_000254915.1 PRJNA224116 SAMN02428952 AIPF00000000.1 na 889215 197 Campylobacter jejuni subsp. jejuni 140-16 strain=140-16 na latest Contig Major Full 2012-03-16 ASM25491v2 Cornell University GCA_000254915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/915/GCF_000254915.1_ASM25491v2/ na na na haploid bacteria 1678201 1678201 30.500000 0 123 123 NCBI RefSeq GCF_000254915.1-RS_2025_06_27 2025-06-27 1817 1674 40 na GCF_000254935.1 PRJNA224116 SAMN02429051 AIPG00000000.1 na 889230 197 Campylobacter jejuni subsp. jejuni 1213 strain=1213 na latest Contig Major Full 2012-03-16 ASM25493v2 Cornell University GCA_000254935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/935/GCF_000254935.1_ASM25493v2/ na na na haploid bacteria 1648061 1648061 30.500000 0 125 125 NCBI RefSeq GCF_000254935.1-RS_2025_06_27 2025-06-27 1770 1642 39 na GCF_000254955.1 PRJNA224116 SAMN02428996 AIPH00000000.1 na 889231 197 Campylobacter jejuni subsp. jejuni 1577 strain=1577 na latest Contig Major Full 2012-03-16 ASM25495v2 Cornell University GCA_000254955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/955/GCF_000254955.1_ASM25495v2/ na na na haploid bacteria 1703661 1703661 30.500000 0 170 170 NCBI RefSeq GCF_000254955.1-RS_2025_06_27 2025-06-27 1865 1711 37 na GCF_000254975.1 PRJNA224116 SAMN02428997 AIPI00000000.1 na 889232 197 Campylobacter jejuni subsp. jejuni 1798 strain=1798 na latest Contig Major Full 2012-03-16 ASM25497v2 Cornell University GCA_000254975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/975/GCF_000254975.1_ASM25497v2/ na na na haploid bacteria 1602805 1602805 30.500000 0 106 106 NCBI RefSeq GCF_000254975.1-RS_2025_06_28 2025-06-28 1714 1587 39 na GCF_000254995.1 PRJNA224116 SAMN02428998 AIPJ00000000.1 na 889233 197 Campylobacter jejuni subsp. jejuni 1854 strain=1854 na latest Contig Major Full 2012-03-16 ASM25499v2 Cornell University GCA_000254995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/254/995/GCF_000254995.1_ASM25499v2/ na na na haploid bacteria 1622514 1622514 30.500000 0 110 110 NCBI RefSeq GCF_000254995.1-RS_2025_06_28 2025-06-28 1736 1607 39 na GCF_000255015.1 PRJNA224116 SAMN02428965 AIPK00000000.1 na 889234 197 Campylobacter jejuni subsp. jejuni 1893 strain=1893 na latest Contig Major Full 2012-03-16 ASM25501v2 Cornell University GCA_000255015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/015/GCF_000255015.1_ASM25501v2/ na na na haploid bacteria 1626431 1626431 30.500000 0 101 101 NCBI RefSeq GCF_000255015.1-RS_2025_06_05 2025-06-05 1758 1618 40 23279811 GCF_000255035.1 PRJNA224116 SAMN02428999 AIPL00000000.1 na 889235 197 Campylobacter jejuni subsp. jejuni 1928 strain=1928 na latest Contig Major Full 2012-03-16 ASM25503v2 Cornell University GCA_000255035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/035/GCF_000255035.1_ASM25503v2/ na na na haploid bacteria 1637403 1637403 30.500000 0 127 127 NCBI RefSeq GCF_000255035.1-RS_2025_06_27 2025-06-27 1766 1653 38 23279811 GCF_000255055.1 PRJNA224116 SAMN02429000 AIPM00000000.1 na 889236 197 Campylobacter jejuni subsp. jejuni LMG 9872 strain=LMG 9872 na latest Contig Major Full 2012-03-16 ASM25505v2 Cornell University GCA_000255055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/055/GCF_000255055.1_ASM25505v2/ na na na haploid bacteria 1620398 1620398 30.500000 0 91 91 NCBI RefSeq GCF_000255055.1-RS_2025_06_28 2025-06-28 1742 1596 39 na GCF_000255075.1 PRJNA224116 SAMN02428966 AIPN00000000.1 na 889237 197 Campylobacter jejuni subsp. jejuni LMG 23210 strain=LMG 23210 na latest Contig Major Full 2012-03-16 ASM25507v2 Cornell University GCA_000255075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/075/GCF_000255075.1_ASM25507v2/ na na na haploid bacteria 1764103 1764103 30.000000 0 164 164 NCBI RefSeq GCF_000255075.1-RS_2025_06_27 2025-06-27 1923 1774 38 na GCF_000255095.1 PRJNA224116 SAMN02429052 AIPO00000000.1 na 889238 197 Campylobacter jejuni subsp. jejuni LMG 23211 strain=LMG 23211 na latest Contig Major Full 2012-03-16 ASM25509v2 Cornell University GCA_000255095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/095/GCF_000255095.1_ASM25509v2/ na na na haploid bacteria 1672359 1672359 30.500000 0 112 112 NCBI RefSeq GCF_000255095.1-RS_2025_06_28 2025-06-28 1803 1667 39 23279811 GCF_000255115.2 PRJNA224116 SAMN02232014 na reference genome 646529 885581 Desulfosporosinus acidiphilus SJ4 strain=SJ4 na latest Complete Genome Major Full 2012-06-15 ASM25511v3 DOE Joint Genome Institute GCA_000255115.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/115/GCF_000255115.2_ASM25511v3/ na assembly from type material na haploid bacteria 4991181 4991181 42.000000 3 3 3 NCBI RefSeq GCF_000255115.2-RS_2026_05_13 2026-05-13 4727 4575 97 23105050 GCF_000255135.1 PRJNA224116 SAMN02261422 na reference genome 443254 149715 Marinitoga piezophila KA3 strain=KA3 na latest Complete Genome Major Full 2012-01-13 ASM25513v1 JGI GCA_000255135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/135/GCF_000255135.1_ASM25513v1/ na assembly from type material na haploid bacteria 2244793 2244793 29.000000 2 2 2 NCBI RefSeq GCF_000255135.1-RS_2026_03_28 2026-03-28 2124 2047 63 23045491 GCF_000255155.1 PRJNA224116 SAMN02603072 na na 698968 1717 Corynebacterium diphtheriae HC02 strain=HC02 na latest Complete Genome Major Full 2012-01-13 ASM25515v1 Center for Biotechnology, Bielefeld University GCA_000255155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/155/GCF_000255155.1_ASM25515v1/ na na na haploid bacteria 2468612 2468612 53.500000 1 1 1 NCBI RefSeq GCF_000255155.1-RS_2026_03_28 2026-03-28 2343 2191 70 22505676 GCF_000255175.1 PRJNA224116 SAMN02603067 na na 698963 1717 Corynebacterium diphtheriae C7 (beta) strain=C7 (beta) na latest Complete Genome Major Full 2012-01-13 ASM25517v1 Center for Biotechnology, Bielefeld University GCA_000255175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/175/GCF_000255175.1_ASM25517v1/ na na na haploid bacteria 2499189 2499189 53.500000 1 1 1 NCBI RefSeq GCF_000255175.1-RS_2026_02_06 2026-02-06 2430 2273 71 22505676 GCF_000255195.1 PRJNA224116 SAMN02603074 na na 698970 1717 Corynebacterium diphtheriae HC04 strain=HC04 na latest Complete Genome Major Full 2012-01-13 ASM25519v1 Center for Biotechnology, Bielefeld University GCA_000255195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/195/GCF_000255195.1_ASM25519v1/ na na na haploid bacteria 2484332 2484332 53.500000 1 1 1 NCBI RefSeq GCF_000255195.1-RS_2026_02_06 2026-02-06 2368 2238 67 22505676 GCF_000255215.1 PRJNA224116 SAMN02603069 na na 698965 1717 Corynebacterium diphtheriae CDCE 8392 strain=CDCE 8392 na latest Complete Genome Major Full 2012-01-13 ASM25521v1 Center for Biotechnology, Bielefeld University GCA_000255215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/215/GCF_000255215.1_ASM25521v1/ na na na haploid bacteria 2433326 2433326 53.500000 1 1 1 NCBI RefSeq GCF_000255215.1-RS_2026_03_28 2026-03-28 2320 2164 70 22505676 GCF_000255235.1 PRJNA224116 SAMN02603071 na na 698967 1717 Corynebacterium diphtheriae HC01 strain=HC01 na latest Complete Genome Major Full 2012-01-13 ASM25523v1 Center for Biotechnology, Bielefeld University GCA_000255235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/235/GCF_000255235.1_ASM25523v1/ na na na haploid bacteria 2427149 2427149 53.500000 1 1 1 NCBI RefSeq GCF_000255235.1-RS_2026_02_06 2026-02-06 2320 2181 70 22505676 GCF_000255255.1 PRJNA224116 SAMN02603076 na na 698971 1717 Corynebacterium diphtheriae VA01 strain=VA01 na latest Complete Genome Major Full 2012-01-13 ASM25525v1 Center for Biotechnology, Bielefeld University GCA_000255255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/255/GCF_000255255.1_ASM25525v1/ na na na haploid bacteria 2395441 2395441 53.500000 1 1 1 NCBI RefSeq GCF_000255255.1-RS_2026_02_06 2026-02-06 2268 2139 67 22505676 GCF_000255275.1 PRJNA224116 SAMN02603068 na na 698964 1717 Corynebacterium diphtheriae PW8 strain=PW8 na latest Complete Genome Major Full 2012-01-13 ASM25527v1 Center for Biotechnology, Bielefeld University GCA_000255275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/275/GCF_000255275.1_ASM25527v1/ na na na haploid bacteria 2530683 2530683 53.500000 1 1 1 NCBI RefSeq GCF_000255275.1-RS_2026_03_20 2026-03-20 2412 2235 68 22505676 GCF_000255295.1 PRJNA224116 SAMN02603593 na reference genome 1144275 184914 Corallococcus coralloides DSM 2259 strain=DSM 2259 na latest Complete Genome Major Full 2012-03-20 ASM25529v1 Max Planck Institute for Terrestrial Microbiology GCA_000255295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/295/GCF_000255295.1_ASM25529v1/ na assembly from type material na haploid bacteria 10080619 10080619 70.000000 1 1 1 NCBI RefSeq GCF_000255295.1-RS_2026_03_20 2026-03-20 8168 8047 73 22582372 GCF_000255315.1 PRJNA224116 SAMN02472063 AJFP00000000.1 na 593105 593105 Pantoea sp. Sc1 strain=Sc1 na latest Contig Major Full 2012-03-20 ASM25531v2 USDA-ARS GCA_000255315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/315/GCF_000255315.1_ASM25531v2/ na na na haploid bacteria 4447209 4447209 57.000000 0 4 4 NCBI RefSeq GCF_000255315.1-RS_2024_08_13 2024-08-13 4171 4045 77 22582377 GCF_000255355.1 PRJNA224116 SAMN02471333 AICO00000000.1 na 1144888 35789 Rickettsia helvetica C9P9 strain=C9P9 na latest Chromosome Major Full 2012-04-05 ASM25535v1 CNRS UMR 6236, Faculté de médecine, Université de la Méditerranée GCA_000255355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/355/GCF_000255355.1_ASM25535v1/ na na na haploid bacteria 1417115 1417015 32.000000 2 2 2 NCBI RefSeq GCF_000255355.1-RS_2026_01_08 2026-01-08 1641 1369 40 22535934 GCF_000255375.1 PRJNA224116 SAMN02436385 AJFX00000000.1 na 1161914 2130 Ureaplasma urealyticum 2033 strain=2033 na latest Contig Major Full 2012-03-20 Uurealyticum2033v1.0 The J. Craig Venter Institute GCA_000255375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/375/GCF_000255375.1_Uurealyticum2033v1.0/ na na na haploid bacteria 803533 803533 25.500000 0 13 13 NCBI RefSeq GCF_000255375.1-RS_2026_02_26 2026-02-26 668 609 36 na GCF_000255395.1 PRJNA224116 SAMN02436386 AJFY00000000.1 na 1161915 2130 Ureaplasma urealyticum 2608 strain=2608 na latest Contig Major Full 2012-03-20 Uurealyticum2608v1.0 The J. Craig Venter Institute GCA_000255395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/395/GCF_000255395.1_Uurealyticum2608v1.0/ na na na haploid bacteria 855948 855948 25.500000 0 13 13 NCBI RefSeq GCF_000255395.1-RS_2026_02_26 2026-02-26 693 627 42 na GCF_000255415.1 PRJNA224116 SAMN02436579 AJFZ00000000.1 na 1161916 2130 Ureaplasma urealyticum 4155 strain=4155 na latest Contig Major Full 2012-03-20 Uurealyticum4155v1.0 The J. Craig Venter Institute GCA_000255415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/415/GCF_000255415.1_Uurealyticum4155v1.0/ na na na haploid bacteria 858138 858138 25.500000 0 17 17 NCBI RefSeq GCF_000255415.1-RS_2026_02_26 2026-02-26 715 646 41 na GCF_000255435.1 PRJNA224116 SAMN02436580 AJGA00000000.1 na 1161917 2130 Ureaplasma urealyticum 4318 strain=4318 na latest Contig Major Full 2012-03-20 Uurealyticum4318v1.0 The J. Craig Venter Institute GCA_000255435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/435/GCF_000255435.1_Uurealyticum4318v1.0/ na na na haploid bacteria 843929 843929 25.500000 0 15 15 NCBI RefSeq GCF_000255435.1-RS_2026_02_26 2026-02-26 690 628 42 na GCF_000255455.1 PRJNA224116 SAMN02470972 AHHE00000000.2 reference genome 620914 1087449 Aquimarina agarilytica ZC1 strain=ZC1 na latest Scaffold Major Full 2012-03-21 ASM25545v1 Shantou University GCA_000255455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/455/GCF_000255455.1_ASM25545v1/ na assembly from type material na haploid bacteria 4257070 4253672 33.000000 0 89 131 NCBI RefSeq GCF_000255455.1-RS_2025_11_21 2025-11-21 3571 3483 40 22535944 GCF_000255475.1 PRJNA224116 SAMN00199225 AFES00000000.1 na 883064 1502 Clostridium perfringens F262 strain=F262 na latest Chromosome Major Full 2012-03-21 ASM25547v1 University of Guelph GCA_000255475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/475/GCF_000255475.1_ASM25547v1/ na na na haploid bacteria 3468406 3464306 28.000000 5 14 53 NCBI RefSeq GCF_000255475.1-RS_2026_04_21 2026-04-21 3218 3109 85 22412860 GCF_000255495.1 PRJNA224116 SAMN02471380 AHYZ00000000.1 na 1133569 238015 Liquorilactobacillus vini DSM 20605 strain=DSM 20605 na latest Contig Major Full 2012-03-20 ASM25549v2 Universidade Federal do Rio de Janeiro GCA_000255495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/495/GCF_000255495.1_ASM25549v2/ na assembly from type material na haploid bacteria 2195706 2195706 37.500000 0 220 220 NCBI RefSeq GCF_000255495.1-RS_2026_01_27 2026-01-27 2296 2130 61 22582376 GCF_000255515.1 PRJNA224116 SAMN02471381 AHZA00000000.1 na 1133851 238015 Liquorilactobacillus vini JP7.8.9 strain=JP7.8.9 na latest Contig Major Full 2012-03-20 ASM25551v2 Universidade Federal do Rio de Janeiro GCA_000255515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/515/GCF_000255515.1_ASM25551v2/ na na na haploid bacteria 2275066 2275066 37.500000 0 837 837 NCBI RefSeq GCF_000255515.1-RS_2026_01_27 2026-01-27 2821 2249 59 22582376 GCF_000255555.1 PRJNA224116 SAMN02261376 AGRW00000000.1 na 907348 165 Treponema saccharophilum DSM 2985 strain=DSM 2985 na latest Contig Major Full 2012-03-21 ASM25555v2 JGI GCA_000255555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/555/GCF_000255555.1_ASM25555v2/ na assembly from type material na haploid bacteria 3453898 3453898 53.000000 0 56 56 NCBI RefSeq GCF_000255555.1-RS_2026_05_01 2026-05-01 2992 2902 68 na GCF_000255575.1 PRJNA224116 SAMN02470754 AJGT00000000.1 na 1094188 1515 Acetivibrio thermocellus YS strain=YS na latest Contig Major Full 2012-03-21 ASM25557v2 ORNL GCA_000255575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/575/GCF_000255575.1_ASM25557v2/ na na na haploid bacteria 3464366 3464366 39.000000 0 100 100 NCBI RefSeq GCF_000255575.1-RS_2026_01_27 2026-01-27 3070 2947 59 22628515 GCF_000255615.2 PRJNA224116 SAMN02470739 na na 1138384 1515 Acetivibrio thermocellus AD2 strain=AD2 na latest Complete Genome Major Full 2016-01-08 ASM25561v3 ORNL GCA_000255615.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/615/GCF_000255615.2_ASM25561v3/ na na na haploid bacteria 3554854 3554854 39.000000 1 1 1 NCBI RefSeq GCF_000255615.2-RS_2026_03_03 2026-03-03 3109 2985 72 22628515 GCF_000255635.1 PRJNA224116 SAMN02470276 AJGB00000000.1 na 1150867 504 Kingella kingae PYKK081 strain=PYKK081 na latest Scaffold Major Full 2012-03-21 ASM25563v1 Los Alamos National Laboratory GCA_000255635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/635/GCF_000255635.1_ASM25563v1/ na na na haploid bacteria 2097547 2049500 46.500000 0 94 163 NCBI RefSeq GCF_000255635.1-RS_2026_04_04 2026-04-04 2258 2081 69 22582375 GCF_000255655.1 PRJNA224116 SAMN02469369 AHZR00000000.1 reference genome 1123242 360056 Schlesneria paludicola DSM 18645 strain=DSM 18645 na latest Scaffold Major Full 2012-04-12 ASM25565v1 Building No.11, Beishan Industial Zone, Yantian District, Shenzhen 518083, China GCA_000255655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/655/GCF_000255655.1_ASM25565v1/ na assembly from type material na haploid bacteria 8702386 8639329 55.500000 0 23 106 NCBI RefSeq GCF_000255655.1-RS_2025_11_20 2025-11-20 6357 6218 83 22740668 GCF_000255675.1 PRJNA224116 SAMN02469378 AHZQ00000000.1 na 886293 466153 Singulisphaera acidiphila DSM 18658 strain=DSM 18658 na latest Scaffold Major Full 2012-04-10 ASM25567v1 Building No.11, Beishan Industial Zone, Yantian District, Shenzhen 518083, China GCA_000255675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/675/GCF_000255675.1_ASM25567v1/ na assembly from type material na haploid bacteria 9728001 9470362 62.000000 0 81 621 NCBI RefSeq GCF_000255675.1-RS_2025_12_12 2025-12-12 7635 7248 80 22740668 GCF_000255705.1 PRJNA224116 SAMN02469381 AIAB00000000.1 reference genome 1123508 360055 Zavarzinella formosa DSM 19928 strain=DSM 19928 na latest Scaffold Major Full 2012-04-12 ASM25570v1 BGI-shenzhen GCA_000255705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/705/GCF_000255705.1_ASM25570v1/ na assembly from type material na haploid bacteria 10086423 9855884 59.000000 0 105 594 NCBI RefSeq GCF_000255705.1-RS_2025_11_20 2025-11-20 8710 8407 86 22740668 GCF_000255735.1 PRJNA224116 SAMN01831184 AGJS00000000.1 na 1084226 632 Yersinia pestis biovar Orientalis str. BA200901799 strain=BA200901799 na latest Contig Major Full 2012-03-22 ASM25573v1 US Army Edgewood Chemical Biological Center GCA_000255735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/735/GCF_000255735.1_ASM25573v1/ na na na haploid bacteria 4581111 4581111 47.500000 0 199 199 NCBI RefSeq GCF_000255735.1-RS_2026_04_29 2026-04-29 4179 3919 73 22359605 GCF_000255755.1 PRJNA224116 SAMN01831182 AGJT00000000.1 na 1084227 632 Yersinia pestis biovar Orientalis str. AS200901539 strain=AS200901539 na latest Contig Major Full 2012-03-22 ASM25575v1 US Army Edgewood Chemical Biological Center GCA_000255755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/755/GCF_000255755.1_ASM25575v1/ na na na haploid bacteria 4572127 4572127 47.500000 0 250 250 NCBI RefSeq GCF_000255755.1-RS_2026_06_01 2026-06-01 4180 3860 64 22359605 GCF_000255775.1 PRJNA224116 SAMN01831179 AGJU00000000.1 na 1084228 632 Yersinia pestis biovar Orientalis str. AS200901156 strain=AS200901156 na latest Contig Major Full 2012-03-22 ASM25577v1 US Army Edgewood Chemical Biological Center GCA_000255775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/775/GCF_000255775.1_ASM25577v1/ na na na haploid bacteria 4578309 4578309 47.500000 0 220 220 NCBI RefSeq GCF_000255775.1-RS_2026_04_29 2026-04-29 4179 3913 72 22359605 GCF_000255795.1 PRJNA224116 SAMN01831183 AGJV00000000.1 na 1084229 632 Yersinia pestis biovar Orientalis str. BA200901703 strain=BA200901703 na latest Contig Major Full 2012-03-22 ASM25579v1 US Army Edgewood Chemical Biological Center GCA_000255795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/795/GCF_000255795.1_ASM25579v1/ na na na haploid bacteria 4560176 4560176 47.500000 0 282 282 NCBI RefSeq GCF_000255795.1-RS_2026_06_01 2026-06-01 4172 3850 67 22359605 GCF_000255815.1 PRJNA224116 SAMN01831185 AGJW00000000.1 na 1084230 632 Yersinia pestis biovar Orientalis str. BA200901990 strain=BA200901990 na latest Contig Major Full 2012-03-22 ASM25581v1 US Army Edgewood Chemical Biological Center GCA_000255815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/815/GCF_000255815.1_ASM25581v1/ na na na haploid bacteria 4527493 4527493 47.500000 0 210 210 NCBI RefSeq GCF_000255815.1-RS_2026_04_29 2026-04-29 4099 3859 73 22359605 GCF_000255835.1 PRJNA224116 SAMN01831186 AGJX00000000.1 na 1084231 632 Yersinia pestis biovar Orientalis str. BA200902009 strain=BA200902009 na latest Contig Major Full 2012-03-22 ASM25583v1 US Army Edgewood Chemical Biological Center GCA_000255835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/835/GCF_000255835.1_ASM25583v1/ na na na haploid bacteria 4563812 4563812 47.500000 0 256 256 NCBI RefSeq GCF_000255835.1-RS_2026_04_29 2026-04-29 4170 3893 65 22359605 GCF_000255855.1 PRJNA224116 SAMN01831187 AGJY00000000.1 na 1084232 632 Yersinia pestis biovar Orientalis str. AS200902147 strain=AS200902147 na latest Contig Major Full 2012-03-22 ASM25585v1 US Army Edgewood Chemical Biological Center GCA_000255855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/855/GCF_000255855.1_ASM25585v1/ na na na haploid bacteria 4592682 4592682 47.500000 0 277 277 NCBI RefSeq GCF_000255855.1-RS_2026_06_13 2026-06-13 4234 3819 71 22359605 GCF_000255875.1 PRJNA224116 SAMN01831180 AGJZ00000000.1 na 1084233 632 Yersinia pestis biovar Orientalis str. AS200901434 strain=AS200901434 na latest Contig Major Full 2012-03-22 ASM25587v1 US Army Edgewood Chemical Biological Center GCA_000255875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/875/GCF_000255875.1_ASM25587v1/ na na na haploid bacteria 4572981 4572981 47.500000 0 237 237 NCBI RefSeq GCF_000255875.1-RS_2026_05_30 2026-05-30 4181 3879 70 22359605 GCF_000255895.1 PRJNA224116 SAMN01831181 AGKA00000000.1 na 1084234 632 Yersinia pestis biovar Orientalis str. AS200901509 strain=AS200901509 na latest Contig Major Full 2012-03-22 ASM25589v1 US Army Edgewood Chemical Biological Center GCA_000255895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/895/GCF_000255895.1_ASM25589v1/ na na na haploid bacteria 4605070 4605070 47.500000 0 263 263 NCBI RefSeq GCF_000255895.1-RS_2026_05_30 2026-05-30 4232 3916 71 22359605 GCF_000255915.1 PRJNA224116 SAMN02603325 na na 1132496 747 Pasteurella multocida subsp. multocida str. HN06 strain=HN06 na latest Complete Genome Major Full 2012-03-23 ASM25591v1 Huazhong Agricultural University GCA_000255915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/915/GCF_000255915.1_ASM25591v1/ na na na haploid bacteria 2407578 2407578 40.000000 2 2 2 NCBI RefSeq GCF_000255915.1-RS_2026_01_02 2026-01-02 2334 2228 78 22628516 GCF_000255935.1 PRJNA224116 SAMN02603743 na na 1117942 1719 Corynebacterium pseudotuberculosis P54B96 strain=P54B96 na latest Complete Genome Major Full 2012-03-23 ASM25593v1 Rede Paraense de Genômica e Proteômica GCA_000255935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/935/GCF_000255935.1_ASM25593v1/ na na na haploid bacteria 2337657 2337657 52.000000 1 1 1 NCBI RefSeq GCF_000255935.1-RS_2026_01_30 2026-01-30 2126 1962 63 na GCF_000255955.1 PRJNA224116 SAMN02604318 na na 1055527 210 Helicobacter pylori ELS37 strain=ELS37 na latest Complete Genome Major Full 2012-03-23 ASM25595v1 Washington University Med. School GCA_000255955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/955/GCF_000255955.1_ASM25595v1/ na na na haploid bacteria 1669876 1669876 39.000000 2 2 2 NCBI RefSeq GCF_000255955.1-RS_2026_01_15 2026-01-15 1601 1457 45 na GCF_000255975.2 PRJNA224116 SAMN02469356 AJHE00000000.2 na 1162297 573 Klebsiella pneumoniae subsp. pneumoniae LCT-KP214 strain=LCT-KP214 na latest Scaffold Major Full 2013-10-23 ASM25597v2 BGI GCA_000255975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/255/975/GCF_000255975.2_ASM25597v2/ na na na haploid bacteria 5791462 5631234 56.500000 0 6 473 NCBI RefSeq GCF_000255975.2-RS_2025_02_19 2025-02-19 6044 5583 119 25015528 GCF_000256015.1 PRJNA224116 SAMN02415287 AJGK00000000.1 na 1156917 28901 Salmonella enterica subsp. enterica serovar Typhi str. BL196 strain=BL196 na latest Contig Major Full 2012-03-26 SalTypBL196 1.0 University of Hyderabad GCA_000256015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/015/GCF_000256015.1_SalTypBL196_1.0/ na na na haploid bacteria 4689922 4689922 52.000000 0 191 191 NCBI RefSeq GCF_000256015.1-RS_2025_04_15 2025-04-15 4750 4279 81 22689247 GCF_000256035.1 PRJNA224116 SAMN02471796 AJGJ00000000.2 na 1156915 210 Helicobacter pylori NAD1 strain=NAD1 na latest Contig Major Full 2012-08-13 ASM25603v2 University of Hyderabad GCA_000256035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/035/GCF_000256035.1_ASM25603v2/ na na na haploid bacteria 1603561 1603561 39.000000 0 103 103 NCBI RefSeq GCF_000256035.1-RS_2026_03_20 2026-03-20 1596 1462 42 23045484 GCF_000256075.1 PRJNA224116 SAMN02471794 AJFA00000000.2 na 1156914 210 Helicobacter pylori NAB47 strain=NAB47 na latest Contig Major Full 2012-08-13 ASM25607v2 University of Hyderabad GCA_000256075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/075/GCF_000256075.1_ASM25607v2/ na na na haploid bacteria 1585921 1585921 39.000000 0 107 107 NCBI RefSeq GCF_000256075.1-RS_2026_03_20 2026-03-20 1577 1416 42 23045484 GCF_000256095.3 PRJNA224116 SAMN02470480 AICZ00000000.3 na 1136157 47951 Vibrio cyclitrophicus 1F53 strain=1F53 na latest Contig Major Full 2024-12-09 ASM25609v3 Massachusetts Institute of Technology GCA_000256095.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/095/GCF_000256095.3_ASM25609v3/ na na na haploid bacteria 5154800 5154800 43.500000 0 6 6 NCBI RefSeq GCF_000256095.3-RS_2025_12_22 2025-12-22 4622 4333 187 22491847;39423289 GCF_000256115.3 PRJNA224116 SAMN02470293 AIDA00000000.3 na 1136158 47951 Vibrio cyclitrophicus 1F97 strain=1F97 na latest Scaffold Major Full 2024-08-26 ASM25611v3 Massachusetts Institute of Technology GCA_000256115.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/115/GCF_000256115.3_ASM25611v3/ na na na haploid bacteria 5292989 5292103 43.500000 0 128 137 NCBI RefSeq GCF_000256115.3-RS_2025_12_19 2025-12-19 4753 4573 33 22491847;39423289 GCF_000256135.2 PRJNA224116 SAMN02470505 AIDB00000000.2 na 1136160 47951 Vibrio cyclitrophicus 1F175 strain=1F175 na latest Scaffold Major Full 2016-09-16 ASM25613v2 Massachusetts Institute of Technology GCA_000256135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/135/GCF_000256135.2_ASM25613v2/ na na na haploid bacteria 5276659 5276475 43.500000 0 109 121 NCBI RefSeq GCF_000256135.2-RS_2026_04_07 2026-04-07 4762 4572 76 22491847 GCF_000256165.3 PRJNA224116 SAMN02470294 AIDC00000000.3 na 1136161 47951 Vibrio cyclitrophicus 1F273 strain=1F273 na latest Scaffold Major Full 2024-12-09 ASM25616v3 Massachusetts Institute of Technology GCA_000256165.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/165/GCF_000256165.3_ASM25616v3/ na na na haploid bacteria 5447498 5447498 43.500000 4 8 8 NCBI RefSeq GCF_000256165.3-RS_2025_12_22 2025-12-22 4909 4550 186 22491847;39423289 GCF_000256185.2 PRJNA224116 SAMN02470508 AIDD00000000.2 na 1136162 47951 Vibrio cyclitrophicus 1F289 strain=1F289 na latest Scaffold Major Full 2016-09-16 ASM25618v2 Massachusetts Institute of Technology GCA_000256185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/185/GCF_000256185.2_ASM25618v2/ na na na haploid bacteria 5056222 5051210 43.500000 0 35 195 NCBI RefSeq GCF_000256185.2-RS_2025_04_04 2025-04-04 4580 4425 58 22491847 GCF_000256205.2 PRJNA224116 SAMN02470295 AIDE00000000.2 na 1136163 47951 Vibrio cyclitrophicus FF75 strain=FF75 na latest Scaffold Major Full 2016-09-16 ASM25620v2 Massachusetts Institute of Technology GCA_000256205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/205/GCF_000256205.2_ASM25620v2/ na na na haploid bacteria 5001944 5001760 43.500000 0 73 80 NCBI RefSeq GCF_000256205.2-RS_2026_04_04 2026-04-04 4444 4312 89 22491847 GCF_000256245.1 PRJNA224116 SAMN02470481 AIDG00000000.1 na 1136165 47951 Vibrio cyclitrophicus FF274 strain=FF274 na latest Scaffold Major Full 2012-04-12 Vibcyclo-FF-274_1.0 Massachusetts Institute of Technology GCA_000256245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/245/GCF_000256245.1_Vibcyclo-FF-274_1.0/ na na na haploid bacteria 5150900 5150605 43.500000 0 138 148 NCBI RefSeq GCF_000256245.1-RS_2026_02_02 2026-02-02 4599 4397 80 22491847 GCF_000256265.3 PRJNA224116 SAMN02470506 na na 1136166 47951 Vibrio cyclitrophicus ZF14 strain=ZF14 na latest Complete Genome Major Full 2025-01-22 ASM25626v3 Massachusetts Institute of Technology GCA_000256265.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/265/GCF_000256265.3_ASM25626v3/ na na na haploid bacteria 5268071 5268071 43.500000 2 2 2 NCBI RefSeq GCF_000256265.3-RS_2025_01_23 2025-01-23 4686 4417 185 22491847 GCF_000256285.2 PRJNA224116 SAMN02470484 AIDI00000000.2 na 1136167 47951 Vibrio cyclitrophicus ZF28 strain=ZF28 na latest Scaffold Major Full 2016-09-16 ASM25628v2 Massachusetts Institute of Technology GCA_000256285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/285/GCF_000256285.2_ASM25628v2/ na na na haploid bacteria 4900035 4899870 43.500000 0 73 86 NCBI RefSeq GCF_000256285.2-RS_2026_04_04 2026-04-04 4341 4206 80 22491847 GCF_000256305.2 PRJNA224116 SAMN02470482 AIDJ00000000.2 na 1136168 47951 Vibrio cyclitrophicus ZF30 strain=ZF30 na latest Scaffold Major Full 2016-09-16 ASM25630v2 Massachusetts Institute of Technology GCA_000256305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/305/GCF_000256305.2_ASM25630v2/ na na na haploid bacteria 5033552 5033436 43.500000 0 84 91 NCBI RefSeq GCF_000256305.2-RS_2026_04_04 2026-04-04 4499 4348 85 22491847 GCF_000256325.2 PRJNA224116 SAMN02470463 AIDK00000000.2 na 1136169 47951 Vibrio cyclitrophicus ZF65 strain=ZF65 na latest Scaffold Major Full 2016-09-16 ASM25632v2 Massachusetts Institute of Technology GCA_000256325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/325/GCF_000256325.2_ASM25632v2/ na na na haploid bacteria 4910949 4910776 43.500000 0 92 105 NCBI RefSeq GCF_000256325.2-RS_2026_04_04 2026-04-04 4308 4237 19 22491847 GCF_000256345.2 PRJNA224116 SAMN02470460 AIDL00000000.2 na 1136170 47951 Vibrio cyclitrophicus ZF99 strain=ZF99 na latest Scaffold Major Full 2016-09-16 ASM25634v2 Massachusetts Institute of Technology GCA_000256345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/345/GCF_000256345.2_ASM25634v2/ na na na haploid bacteria 4917290 4917208 43.500000 0 80 87 NCBI RefSeq GCF_000256345.2-RS_2026_04_04 2026-04-04 4326 4200 72 22491847 GCF_000256365.2 PRJNA224116 SAMN02470436 AIDM00000000.2 na 1136171 47951 Vibrio cyclitrophicus ZF170 strain=ZF170 na latest Scaffold Major Full 2016-09-16 ASM25636v2 Massachusetts Institute of Technology GCA_000256365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/365/GCF_000256365.2_ASM25636v2/ na na na haploid bacteria 4872233 4871056 43.500000 0 47 76 NCBI RefSeq GCF_000256365.2-RS_2026_04_04 2026-04-04 4307 4206 64 22491847 GCF_000256385.2 PRJNA224116 SAMN02470507 AIDN00000000.2 na 1136173 47951 Vibrio cyclitrophicus ZF207 strain=ZF207 na latest Scaffold Major Full 2016-09-16 ASM25638v2 Massachusetts Institute of Technology GCA_000256385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/385/GCF_000256385.2_ASM25638v2/ na na na haploid bacteria 5051453 5050172 43.500000 0 93 151 NCBI RefSeq GCF_000256385.2-RS_2026_04_04 2026-04-04 4525 4367 83 22491847 GCF_000256405.2 PRJNA224116 SAMN02470461 AIDO00000000.2 na 1136172 47951 Vibrio cyclitrophicus ZF205 strain=ZF205 na latest Scaffold Major Full 2016-09-16 ASM25640v2 Massachusetts Institute of Technology GCA_000256405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/405/GCF_000256405.2_ASM25640v2/ na na na haploid bacteria 4892674 4875135 43.500000 0 58 73 NCBI RefSeq GCF_000256405.2-RS_2026_04_04 2026-04-04 4325 4186 94 22491847 GCF_000256425.1 PRJNA224116 SAMN02470483 AIDP00000000.1 na 1136174 47951 Vibrio cyclitrophicus ZF255 strain=ZF255 na latest Scaffold Major Full 2012-04-12 Vibcyclo-ZF-255_1.0 Massachusetts Institute of Technology GCA_000256425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/425/GCF_000256425.1_Vibcyclo-ZF-255_1.0/ na na na haploid bacteria 4968591 4968531 43.500000 0 126 132 NCBI RefSeq GCF_000256425.1-RS_2025_12_10 2025-12-10 4424 4285 79 22491847 GCF_000256445.2 PRJNA224116 SAMN02470509 AIDQ00000000.2 na 1136175 47951 Vibrio cyclitrophicus ZF264 strain=ZF264 na latest Scaffold Major Full 2016-09-16 ASM25644v2 Massachusetts Institute of Technology GCA_000256445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/445/GCF_000256445.2_ASM25644v2/ na na na haploid bacteria 4910942 4908290 43.500000 0 56 128 NCBI RefSeq GCF_000256445.2-RS_2026_04_04 2026-04-04 4354 4245 62 22491847 GCF_000256465.2 PRJNA224116 SAMN02470504 AIDR00000000.2 na 1136176 47951 Vibrio cyclitrophicus ZF270 strain=ZF270 na latest Scaffold Major Full 2016-09-16 ASM25646v2 Massachusetts Institute of Technology GCA_000256465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/465/GCF_000256465.2_ASM25646v2/ na na na haploid bacteria 5182207 5147715 43.500000 0 45 244 NCBI RefSeq GCF_000256465.2-RS_2026_04_07 2026-04-07 4651 4459 50 22491847 GCF_000256485.1 PRJNA224116 SAMN02470437 AIDS00000000.1 na 530557 29497 Vibrio splendidus 12F01 strain=12F01 na latest Contig Major Full 2012-03-26 Vsplend_12F01_1.0 Massachusetts Institute of Technology GCA_000256485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/485/GCF_000256485.1_Vsplend_12F01_1.0/ na na na haploid bacteria 5810698 5810698 44.000000 0 87 87 NCBI RefSeq GCF_000256485.1-RS_2026_04_20 2026-04-20 5138 4960 76 22491847 GCF_000256505.1 PRJNA224116 SAMN02470971 AJFC00000000.1 na 450821 450821 Rhodococcus sp. P14 strain=P14 na latest Contig Major Full 2012-03-26 ASM25650v1 Shantou University GCA_000256505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/505/GCF_000256505.1_ASM25650v1/ na na na haploid bacteria 5669990 5669990 70.500000 0 427 427 NCBI RefSeq GCF_000256505.1-RS_2025_08_27 2025-08-27 5480 5230 54 22689235 GCF_000256525.1 PRJNA224116 SAMN02470833 AIIE00000000.1 na 707237 1773 Mycobacterium tuberculosis CTRI-4 strain=CTRI-4 na latest Contig Major Full 2012-03-26 ASM25652v1 Research Institute for Physical-Chemical Medicine, Moscow, Russia GCA_000256525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/525/GCF_000256525.1_ASM25652v1/ na na na haploid bacteria 4321569 4321569 65.500000 0 44 44 NCBI RefSeq GCF_000256525.1-RS_2025_05_23 2025-05-23 4159 3908 51 23437175 GCF_000256565.1 PRJNA224116 SAMN02469784 AJHH00000000.1 na 1161913 213312 Herbaspirillum lusitanum P6-12 strain=P6-12 na latest Contig Major Full 2012-03-26 Asm2.0 INCT of Biological Nitrogen Fixation GCA_000256565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/565/GCF_000256565.1_Asm2.0/ na assembly from type material na haploid bacteria 4904866 4904866 60.500000 0 820 820 NCBI RefSeq GCF_000256565.1-RS_2026_02_06 2026-02-06 5223 4582 49 22815451 GCF_000256605.2 PRJNA224116 SAMN02470462 AIDF00000000.2 na 1136164 47951 Vibrio cyclitrophicus FF160 strain=FF160 na latest Scaffold Major Full 2016-09-16 ASM25660v2 Massachusetts Institute of Technology GCA_000256605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/605/GCF_000256605.2_ASM25660v2/ na na na haploid bacteria 5191142 5190126 43.500000 0 109 174 NCBI RefSeq GCF_000256605.2-RS_2025_04_04 2025-04-04 4636 4454 78 22491847 GCF_000256625.1 PRJNA224116 SAMN01816202 AJGW00000000.1 na 1124937 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41579 strain=41579 na latest Contig Major Full 2012-03-27 ASM25662v1 FDA GCA_000256625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/625/GCF_000256625.1_ASM25662v1/ na na na haploid bacteria 4890155 4890155 52.000000 0 61 61 NCBI RefSeq GCF_000256625.1-RS_2025_06_04 2025-06-04 4841 4550 106 22628505 GCF_000256645.1 PRJNA224116 SAMN02393735 ADNO00000000.1 na 497739 1313 Streptococcus pneumoniae SV36 strain=SV36 na latest Contig Major Full 2012-03-27 ASM25664v1 Center for Genomic Sciences GCA_000256645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/645/GCF_000256645.1_ASM25664v1/ na na na haploid bacteria 2156372 2156372 39.500000 0 9 9 NCBI RefSeq GCF_000256645.1-RS_2026_02_07 2026-02-07 2211 1953 74 na GCF_000256665.1 PRJNA224116 SAMN02393736 ABXO00000000.1 na 497980 1313 Streptococcus pneumoniae 459-5 strain=459-5 na latest Contig Major Full 2012-03-27 ASM25666v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000256665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/665/GCF_000256665.1_ASM25666v1/ na na na haploid bacteria 2169192 2169192 39.500000 0 47 47 NCBI RefSeq GCF_000256665.1-RS_2025_02_17 2025-02-17 2239 2034 36 na GCF_000256685.1 PRJNA224116 SAMN02393734 ADNN00000000.1 na 497738 1313 Streptococcus pneumoniae SV35 strain=SV35 na latest Contig Major Full 2012-03-27 ASM25668v1 Center for Genomic Sciences GCA_000256685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/256/685/GCF_000256685.1_ASM25668v1/ na na na haploid bacteria 2161785 2161785 39.500000 0 11 11 NCBI RefSeq GCF_000256685.1-RS_2026_01_01 2026-01-01 2186 1966 42 na GCF_000257145.1 PRJNA224116 SAMN02470550 AJFF00000000.1 na 1154769 28068 Rubrivivax gelatinosus CBS strain=CBS na latest Contig Major Full 2012-03-30 ASM25714v1 Michigan State University GCA_000257145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/145/GCF_000257145.1_ASM25714v1/ na na na haploid bacteria 5010880 5010880 70.500000 0 1219 1219 NCBI RefSeq GCF_000257145.1-RS_2025_12_05 2025-12-05 5598 5050 53 22628496 GCF_000257165.1 PRJNA224116 SAMN02470770 AEZA00000000.1 na 990314 55601 Vibrio anguillarum 96F strain=96F na latest Contig Major Full 2011-06-22 ASM25716v1 OHSU GCA_000257165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/165/GCF_000257165.1_ASM25716v1/ na na na haploid bacteria 4062170 4062170 44.500000 0 193 193 NCBI RefSeq GCF_000257165.1-RS_2026_02_06 2026-02-06 3726 3589 71 21576332 GCF_000257205.1 PRJNA224116 SAMN02470772 AEZC00000000.1 na 990998 28174 Vibrio ordalii ATCC 33509 strain=ATCC 33509 na latest Contig Major Full 2011-06-22 ASM25720v1 Oregon Health Sciences University GCA_000257205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/205/GCF_000257205.1_ASM25720v1/ na assembly from type material na haploid bacteria 3412166 3412166 44.500000 0 254 254 NCBI RefSeq GCF_000257205.1-RS_2026_06_22 2026-06-22 3209 2936 70 21576332 GCF_000257225.2 PRJNA224116 SAMN02471415 AJGF00000000.1 na 1149134 36809 Mycobacteroides abscessus M93 strain=M93 na latest Contig Minor Full 2012-03-30 ASM25722v2 Faculty of Dentistry, Universiti Malaya, Kuala Lumpur GCA_000257225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/225/GCF_000257225.2_ASM25722v2/ na na na haploid bacteria 5073598 5073598 64.000000 0 41 41 NCBI RefSeq GCF_000257225.2-RS_2026_06_30 2026-06-30 5002 4900 52 22628507 GCF_000257245.2 PRJNA224116 SAMN02471416 AJGG00000000.1 na 1158135 36809 Mycobacteroides abscessus M94 strain=M94 na latest Contig Minor Full 2012-03-30 ASM25724v2 Universiti Malaya, Kuala Lumpur GCA_000257245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/245/GCF_000257245.2_ASM25724v2/ na na na haploid bacteria 5090110 5090110 64.000000 0 82 82 NCBI RefSeq GCF_000257245.2-RS_2026_03_21 2026-03-21 5129 4834 67 23012295 GCF_000257395.1 PRJNA224116 SAMN02471334 AJGC00000000.1 reference genome 1156986 676517 Rickettsiella massiliensis 20B strain=20B na latest Contig Major Full 2012-04-02 ASM25739v1 Unité des Rickettsies CNRS URMITE 3236 (WHO Collaborative center) GCA_000257395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/395/GCF_000257395.1_ASM25739v1/ na assembly from type material na haploid bacteria 1727973 1727973 39.000000 0 6 6 NCBI RefSeq GCF_000257395.1-RS_2025_12_11 2025-12-11 2185 1901 46 22628513 GCF_000257415.2 PRJNA224116 SAMN02469782 AJFN00000000.2 na 1147127 666 Vibrio cholerae 2011EL-301 strain=2011EL-301 na latest Contig Major Full 2013-03-15 ASM25741v2 Central Research Institute for Epidemiology GCA_000257415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/415/GCF_000257415.2_ASM25741v2/ na na na haploid bacteria 4002872 4002872 47.500000 0 163 163 NCBI RefSeq GCF_000257415.2-RS_2025_12_25 2025-12-25 3665 3538 85 23969060 GCF_000257455.1 PRJNA224116 SAMN00761855 AJKQ00000000.1 na 1095741 1303 Streptococcus oralis SK610 strain=SK610 na latest Contig Major Full 2012-04-02 SoralisSK610v1.0 J. Craig Venter Institute GCA_000257455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/455/GCF_000257455.1_SoralisSK610v1.0/ na na na haploid bacteria 1986816 1986816 41.000000 0 31 31 NCBI RefSeq GCF_000257455.1-RS_2025_02_17 2025-02-17 1926 1854 33 na GCF_000257475.1 PRJNA224116 SAMN00761854 AJKP00000000.1 na 1095740 1303 Streptococcus oralis SK100 strain=SK100 na latest Contig Major Full 2012-04-02 SoralisSK100v1.0 J. Craig Venter Institute GCA_000257475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/475/GCF_000257475.1_SoralisSK100v1.0/ na na na haploid bacteria 1920577 1920577 41.000000 0 51 51 NCBI RefSeq GCF_000257475.1-RS_2026_01_30 2026-01-30 1961 1853 40 na GCF_000257495.1 PRJNA224116 SAMN00761853 AJKO00000000.1 na 1095739 1303 Streptococcus oralis SK10 strain=SK10 na latest Contig Major Full 2012-04-02 SoralisSK10v1.0 J. Craig Venter Institute GCA_000257495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/495/GCF_000257495.1_SoralisSK10v1.0/ na na na haploid bacteria 1938353 1938353 41.500000 0 39 39 NCBI RefSeq GCF_000257495.1-RS_2026_01_30 2026-01-30 1924 1829 46 na GCF_000257545.3 PRJNA224116 SAMN02469697 na na 1147786 75612 Pseudomonas mandelii JR-1 strain=JR-1 na latest Complete Genome Major Full 2014-05-15 ASM25754v3 Daegu University GCA_000257545.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/545/GCF_000257545.3_ASM25754v3/ na na na haploid bacteria 7188564 7188564 59.000000 2 2 2 NCBI RefSeq GCF_000257545.3-RS_2026_03_28 2026-03-28 6676 6419 88 22628497 GCF_000257605.1 PRJNA224116 SAMN02471581 AHZM00000000.1 na 1144884 1144884 Pseudomonas sp. R62 strain=R62 na latest Scaffold Major Full 2012-04-05 ASM25760v1 Botanical Institute GCA_000257605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/605/GCF_000257605.1_ASM25760v1/ na na na haploid bacteria 6583569 5957261 60.000000 0 192 991 NCBI RefSeq GCF_000257605.1-RS_2025_08_27 2025-08-27 6012 5558 69 22628504 GCF_000257625.1 PRJNA224116 SAMN02471582 AHZN00000000.1 na 1144885 1144885 Pseudomonas sp. R81 strain=R81 na latest Scaffold Major Full 2012-04-05 ASM25762v1 Botanical Institute GCA_000257625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/625/GCF_000257625.1_ASM25762v1/ na na na haploid bacteria 6225770 6131782 60.500000 0 8 151 NCBI RefSeq GCF_000257625.1-RS_2025_08_27 2025-08-27 5807 5609 66 22628504 GCF_000257645.1 PRJNA224116 SAMN02471700 AJHJ00000000.1 na 932213 932213 Serratia sp. M24T3 strain=M24T3 na latest Contig Major Full 2012-04-05 ASM25764v1 University of Coimbra - Faculty of Life Sciences GCA_000257645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/645/GCF_000257645.1_ASM25764v1/ na na na haploid bacteria 5254550 5254550 50.000000 0 114 114 NCBI RefSeq GCF_000257645.1-RS_2024_08_12 2024-08-12 4936 4733 78 22740681 GCF_000257665.1 PRJNA224116 SAMN02469920 AJKR00000000.1 na 1081644 1081644 Candidatus Aquiluna sp. IMCC13023 strain=IMCC13023 na latest Contig Major Full 2012-04-05 ASM25766v1 Inha University GCA_000257665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/665/GCF_000257665.1_ASM25766v1/ na na na haploid bacteria 1359862 1359862 51.500000 0 6 6 NCBI RefSeq GCF_000257665.1-RS_2024_06_15 2024-06-15 1387 1335 47 22689238 GCF_000257705.1 PRJNA224116 SAMN00761826 AJGH00000000.1 na 1095750 467210 Lachnoanaerobaculum saburreum F0468 strain=F0468 na latest Contig Major Full 2012-04-05 EsaburreumF0468v1.0 J. Craig Venter Institute GCA_000257705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/705/GCF_000257705.1_EsaburreumF0468v1.0/ na na na haploid bacteria 3074086 3074086 36.500000 0 143 143 NCBI RefSeq GCF_000257705.1-RS_2026_02_27 2026-02-27 3070 2888 54 na GCF_000257725.1 PRJNA224116 SAMN02470133 AJFJ00000000.1 na 1150599 1771 Mycolicibacterium phlei RIVM601174 strain=RIVM601174 na latest Contig Major Full 2012-04-05 ASM25772v1 KAUST GCA_000257725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/725/GCF_000257725.1_ASM25772v1/ na na na haploid bacteria 5681954 5681954 69.000000 0 102 102 NCBI RefSeq GCF_000257725.1-RS_2026_03_20 2026-03-20 5710 5520 57 22628511 GCF_000257745.1 PRJNA224116 SAMN02470128 AJFI00000000.1 na 1150591 1789 Mycobacterium xenopi RIVM700367 strain=RIVM700367 na latest Contig Major Full 2012-04-05 ASM25774v1 KAUST GCA_000257745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/745/GCF_000257745.1_ASM25774v1/ na na na haploid bacteria 4434836 4434836 66.000000 0 117 117 NCBI RefSeq GCF_000257745.1-RS_2026_03_20 2026-03-20 4397 4119 54 22628510 GCF_000257765.1 PRJNA224116 SAMN00761791 AICP00000000.1 na 1095729 1328 Streptococcus anginosus subsp. whileyi CCUG 39159 strain=CCUG 39159 na latest Contig Major Full 2012-04-05 ASM25776v1 J. Craig Venter Institute GCA_000257765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/765/GCF_000257765.1_ASM25776v1/ na assembly from type material na haploid bacteria 2294730 2294730 38.500000 0 83 83 NCBI RefSeq GCF_000257765.1-RS_2025_02_17 2025-02-17 2298 2107 49 na GCF_000257785.1 PRJNA224116 SAMN00761792 AICQ00000000.1 na 1095730 76860 Streptococcus constellatus subsp. constellatus SK53 strain=SK53 na latest Contig Major Full 2012-04-05 ASM25778v1 J. Craig Venter Institute GCA_000257785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/785/GCF_000257785.1_ASM25778v1/ na na na haploid bacteria 1840061 1840061 38.000000 0 54 54 NCBI RefSeq GCF_000257785.1-RS_2025_02_17 2025-02-17 1831 1713 38 na GCF_000257825.1 PRJNA224116 SAMN00761794 AICS00000000.1 na 889205 257758 Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455 strain=ATCC BAA-960 na latest Contig Major Full 2012-04-05 ASM25782v1 J. Craig Venter Institute GCA_000257825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/825/GCF_000257825.1_ASM25782v1/ na assembly from type material na haploid bacteria 2085749 2085749 40.000000 0 253 253 NCBI RefSeq GCF_000257825.1-RS_2025_07_29 2025-07-29 2153 1986 31 na GCF_000257845.1 PRJNA224116 SAMN00761796 AICT00000000.1 na 1095738 1303 Streptococcus oralis SK1074 strain=SK1074 na latest Contig Major Full 2012-04-05 ASM25784v1 J. Craig Venter Institute GCA_000257845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/845/GCF_000257845.1_ASM25784v1/ na na na haploid bacteria 1853895 1853895 41.500000 0 20 20 NCBI RefSeq GCF_000257845.1-RS_2025_08_25 2025-08-25 1807 1736 35 na GCF_000257865.1 PRJNA224116 SAMN00761799 AICU00000000.1 na 1095736 28037 Streptococcus mitis SK575 strain=SK575 na latest Contig Major Full 2012-04-05 ASM25786v1 J. Craig Venter Institute GCA_000257865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/865/GCF_000257865.1_ASM25786v1/ na na na haploid bacteria 2018798 2018798 39.500000 0 90 90 NCBI RefSeq GCF_000257865.1-RS_2026_03_16 2026-03-16 1994 1898 35 na GCF_000257885.1 PRJNA224116 SAMN02471955 AJGI00000000.1 na 1162302 1717 Corynebacterium diphtheriae bv. mitis str. NC03529 strain=NC03529 na latest Contig Major Full 2012-04-05 ASM25788v1 Strathclyde Institute Of Pharmacy And Biomedical Sciences, University of Strathclyde, Glasgow GCA_000257885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/885/GCF_000257885.1_ASM25788v1/ na na na haploid bacteria 2483675 2483675 53.500000 0 43 43 NCBI RefSeq GCF_000257885.1-RS_2026_03_20 2026-03-20 2432 2281 58 22628502 GCF_000257925.1 PRJNA224116 SAMN00761833 AJIN00000000.1 na 1095752 712461 Prevotella sp. oral taxon 306 str. F0472 strain=F0472 na latest Contig Major Full 2012-04-05 PspF0472v1.0 J. Craig Venter Institute GCA_000257925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/925/GCF_000257925.1_PspF0472v1.0/ na na na haploid bacteria 2945767 2945767 41.500000 0 74 74 NCBI RefSeq GCF_000257925.1-RS_2025_01_07 2025-01-07 2486 2351 58 na GCF_000257965.1 PRJNA224116 SAMN00189683 AJJS00000000.1 na 904791 1282 Staphylococcus epidermidis IS-K strain=IS-K na latest Contig Major Full 2012-04-05 SaureusISKv1.0 J. Craig Venter Institute GCA_000257965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/965/GCF_000257965.1_SaureusISKv1.0/ na na na haploid bacteria 2528532 2528532 32.000000 0 57 57 NCBI RefSeq GCF_000257965.1-RS_2026_03_15 2026-03-15 2464 2252 80 na GCF_000257985.1 PRJNA224116 SAMN00189695 AJLD00000000.1 na 904792 1280 Staphylococcus aureus subsp. aureus IS-M strain=IS-M na latest Contig Major Full 2012-04-05 SaureusISMv1.0 J. Craig Venter Institute GCA_000257985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/257/985/GCF_000257985.1_SaureusISMv1.0/ na na na haploid bacteria 2811317 2811317 32.500000 0 49 49 NCBI RefSeq GCF_000257985.1-RS_2025_04_15 2025-04-15 2836 2595 72 na GCF_000258025.1 PRJNA224116 SAMN02604168 na na 595495 562 Escherichia coli KO11FL strain=KO11FL na latest Complete Genome Major Full 2012-04-06 ASM25802v1 University of Florida GCA_000258025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/025/GCF_000258025.1_ASM25802v1/ na na na haploid bacteria 5027172 5027172 51.000000 2 2 2 NCBI RefSeq GCF_000258025.1-RS_2025_06_09 2025-06-09 4920 4535 120 22075923 GCF_000258125.2 PRJNA224116 SAMN02469900 na na 1126218 1402 Bacillus licheniformis WX-02 strain=WX-02 na latest Chromosome Major Full 2015-07-16 ASM25812v2 State Key Laboratory of Agricultural Microbiology GCA_000258125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/125/GCF_000258125.2_ASM25812v2/ na na na haploid bacteria 4286821 4286052 46.000000 1 1 3 NCBI RefSeq GCF_000258125.2-RS_2026_02_06 2026-02-06 4456 4244 108 22689245 GCF_000258145.1 PRJNA224116 SAMN02604169 na na 566546 562 Escherichia coli W strain=W na latest Complete Genome Major Full 2012-04-06 ASM25814v1 University of Florida GCA_000258145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/145/GCF_000258145.1_ASM25814v1/ na na na haploid bacteria 5005347 5005347 51.000000 3 3 3 NCBI RefSeq GCF_000258145.1-RS_2025_06_09 2025-06-09 4905 4676 119 22075923 GCF_000258175.1 PRJNA224116 SAMN02261402 AICV00000000.1 reference genome 882086 75294 Saccharomonospora xinjiangensis XJ-54 strain=XJ-54 na latest Scaffold Major Full 2012-04-06 ASM25817v1 JGI GCA_000258175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/175/GCF_000258175.1_ASM25817v1/ na assembly from type material na haploid bacteria 4776006 4774606 69.000000 0 2 16 NCBI RefSeq GCF_000258175.1-RS_2025_08_25 2025-08-25 4408 4320 59 na GCF_000258205.1 PRJNA224116 SAMN00792226 AJJQ00000000.1 na 1125724 172042 Rothia aeria F0474 strain=F0474 na latest Contig Major Full 2012-04-06 RaeriaF0474v1.0 NCBI GCA_000258205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/205/GCF_000258205.1_RaeriaF0474v1.0/ na na na haploid bacteria 2584293 2584293 56.500000 0 50 50 NCBI RefSeq GCF_000258205.1-RS_2025_02_17 2025-02-17 2266 2203 50 na GCF_000258245.1 PRJNA224116 SAMN02261423 na na 798128 274 Thermus thermophilus JL-18 strain=JL-18 na latest Complete Genome Major Full 2012-04-09 ASM25824v1 JGI GCA_000258245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/245/GCF_000258245.1_ASM25824v1/ na na na haploid bacteria 2311212 2311212 69.000000 3 3 3 NCBI RefSeq GCF_000258245.1-RS_2025_12_06 2025-12-06 2535 2422 57 23405355 GCF_000258265.1 PRJNA224116 SAMN00761851 AJKE00000000.1 na 1095734 257758 Streptococcus pseudopneumoniae SK674 strain=SK674 na latest Contig Major Full 2012-04-09 SpseudopneumoniaeSK674v1.0 J. Craig Venter Institute GCA_000258265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/265/GCF_000258265.1_SpseudopneumoniaeSK674v1.0/ na na na haploid bacteria 2078115 2078115 40.000000 0 109 109 NCBI RefSeq GCF_000258265.1-RS_2026_04_07 2026-04-07 2187 1951 35 na GCF_000258325.1 PRJNA224116 SAMN02469377 AJKH00000000.1 na 1167697 1352 Enterococcus faecium LCT-EF90 strain=LCT-EF90 na latest Scaffold Major Full 2012-04-12 Enterococcus faecium LCT-EF90,version 1.0 BGI-shenzhen GCA_000258325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/325/GCF_000258325.1_Enterococcus_faecium_LCT-EF90_version_1.0/ na na na haploid bacteria 2773995 2715222 38.000000 0 31 118 NCBI RefSeq GCF_000258325.1-RS_2026_03_20 2026-03-20 2682 2517 40 22689242 GCF_000258345.2 PRJNA224116 SAMN02712577 AJLH00000000.2 na 1163751 138072 Candidatus Hamiltonella defensa MED (Bemisia tabaci) strain=MED (Bemisia tabaci) na latest Contig Major Full 2015-09-01 ASM25834v2 Zhejiang University GCA_000258345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/345/GCF_000258345.2_ASM25834v2/ na na na haploid bacteria 1800792 1800792 40.500000 0 92 92 NCBI RefSeq GCF_000258345.2-RS_2026_05_18 2026-05-18 1836 1655 49 22689243;25887812 GCF_000258365.1 PRJNA224116 SAMN02603149 na na 1160717 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 strain=B182 na latest Complete Genome Major Full 2012-04-10 ASM25836v1 CNRS-UMR6290 GCA_000258365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/365/GCF_000258365.1_ASM25836v1/ na na na haploid bacteria 4788046 4788046 52.000000 2 2 2 NCBI RefSeq GCF_000258365.1-RS_2025_04_26 2025-04-26 4678 4337 121 22689230 GCF_000258385.1 PRJNA224116 SAMN02603753 na na 1089446 1719 Corynebacterium pseudotuberculosis 267 strain=267 na latest Complete Genome Major Full 2012-04-10 ASM25838v1 Rede Paraense de Genomica e Proteomica GCA_000258385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/385/GCF_000258385.1_ASM25838v1/ na na na haploid bacteria 2337628 2337628 52.000000 1 1 1 NCBI RefSeq GCF_000258385.1-RS_2026_03_20 2026-03-20 2121 2024 63 22689248 GCF_000258405.1 PRJNA224116 SAMN02603949 na reference genome 945713 591197 Ignavibacterium album JCM 16511 strain=JCM 16511 na latest Complete Genome Major Full 2012-04-10 ASM25840v1 The Pennsylvania State University GCA_000258405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/405/GCF_000258405.1_ASM25840v1/ na assembly from type material na haploid bacteria 3658997 3658997 34.000000 1 1 1 NCBI RefSeq GCF_000258405.1-RS_2026_03_30 2026-03-30 3183 3119 51 22661972 GCF_000258425.1 PRJNA224116 SAMN02603095 na reference genome 1163730 683846 Fervidicoccus fontis Kam940 strain=Kam940 na latest Complete Genome Major Full 2012-04-10 ASM25842v1 Centre Bioengineering RAS GCA_000258425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/425/GCF_000258425.1_ASM25842v1/ na assembly from type material na haploid archaea 1319206 1319206 37.500000 1 1 1 NCBI RefSeq GCF_000258425.1-RS_2026_04_23 2026-04-23 1419 1350 49 24366681 GCF_000258445.1 PRJNA224116 SAMN00761834 AJKN00000000.1 na 1095731 1338 Streptococcus intermedius SK54 = ATCC 27335 strain=SK54 na latest Contig Major Full 2012-04-10 SintermediusSK54v1.0 J. Craig Venter Institute GCA_000258445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/445/GCF_000258445.1_SintermediusSK54v1.0/ na assembly from type material na haploid bacteria 1910718 1910718 37.500000 0 17 17 NCBI RefSeq GCF_000258445.1-RS_2026_04_16 2026-04-16 1876 1774 34 na GCF_000258495.1 PRJNA224116 SAMN02470139 AJLG00000000.1 na 1149865 454586 Pedobacter agri PB92 strain=PB92 na latest Contig Major Full 2012-04-11 PB92_1.0 Korea Basic Science Institute (KBSI) GCA_000258495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/495/GCF_000258495.1_PB92_1.0/ na assembly from type material na haploid bacteria 5141552 5141552 38.000000 0 379 379 NCBI RefSeq GCF_000258495.1-RS_2025_12_03 2025-12-03 4874 4676 55 22740666 GCF_000258515.1 PRJNA224116 SAMN02470188 AJLF00000000.1 reference genome 1151117 54076 Thermococcus zilligii AN1 strain=AN1 na latest Contig Major Full 2012-04-11 TheZil1.0 Korea Research Institute of Bioscience and Biotechnology GCA_000258515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/515/GCF_000258515.1_TheZil1.0/ na assembly from type material na haploid archaea 1764559 1764559 54.500000 0 5 5 NCBI RefSeq GCF_000258515.1-RS_2025_11_20 2025-11-20 1918 1833 52 22740682 GCF_000258535.2 PRJNA224116 SAMN02603635 na reference genome 997761 61624 Paenibacillus mucilaginosus K02 strain=K02 na latest Complete Genome Major Full 2013-06-10 ASM25853v2 Nanjing Normal University GCA_000258535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/535/GCF_000258535.2_ASM25853v2/ na na na haploid bacteria 8819200 8819200 58.500000 1 1 1 NCBI RefSeq GCF_000258535.2-RS_2026_04_02 2026-04-02 7495 7208 194 na GCF_000258575.2 PRJNA224116 SAMN02470951 AJLO00000000.2 na 1167641 86188 Stenotrophomonas geniculata N1 strain=N1 na latest Contig Major Full 2015-08-17 ASM25857v2 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000258575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/575/GCF_000258575.2_ASM25857v2/ na na na haploid bacteria 4678478 4678478 66.500000 0 48 48 NCBI RefSeq GCF_000258575.2-RS_2026_05_07 2026-05-07 4163 4068 70 22689240 GCF_000258595.1 PRJNA224116 SAMN02471954 AJJM00000000.1 na 1134445 78355 Streptomyces somaliensis DSM 40738 strain=DSM 40738 na latest Contig Major Full 2012-04-12 Ssomaliensis1 Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde GCA_000258595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/595/GCF_000258595.1_Ssomaliensis1/ na na na haploid bacteria 5176903 5176903 74.000000 0 243 243 NCBI RefSeq GCF_000258595.1-RS_2025_07_11 2025-07-11 4710 4518 66 22689234 GCF_000258615.1 PRJNA224116 SAMN02472117 AHZF00000000.1 na 1136218 562 Escherichia coli O104:H4 str. ON2011 strain=ON2011 na latest Scaffold Major Full 2012-04-13 ASM25861v1 Wayne State University GCA_000258615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/615/GCF_000258615.1_ASM25861v1/ na na na haploid bacteria 5415204 5230424 50.500000 0 7 116 NCBI RefSeq GCF_000258615.1-RS_2025_05_23 2025-05-23 5235 4811 92 22493677 GCF_000258635.1 PRJNA224116 SAMN02472119 AHZE00000000.1 na 1136217 562 Escherichia coli O104:H4 str. ON2010 strain=ON2010 na latest Scaffold Major Full 2012-04-13 ASM25863v1 Wayne State University GCA_000258635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/635/GCF_000258635.1_ASM25863v1/ na na na haploid bacteria 5111373 5100158 50.500000 0 5 80 NCBI RefSeq GCF_000258635.1-RS_2025_05_23 2025-05-23 5129 4720 100 22493677 GCF_000258685.1 PRJNA224116 SAMN02603419 na na 1155084 1280 Staphylococcus aureus subsp. aureus 71193 strain=71193 na latest Chromosome Major Full 2012-04-13 ASM25868v1 Integrated Genomics GCA_000258685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/685/GCF_000258685.1_ASM25868v1/ na na na haploid bacteria 2715000 2714534 33.000000 1 1 3 NCBI RefSeq GCF_000258685.1-RS_2025_02_25 2025-02-25 2668 2498 78 22375071 GCF_000258725.1 PRJNA224116 SAMN02471215 AJJN00000000.1 na 1136178 1426 Parageobacillus thermoglucosidasius TNO-09.020 strain=TNO-09.020 na latest Chromosome Major Full 2012-04-18 ASM25872v1 CMBI GCA_000258725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/725/GCF_000258725.1_ASM25872v1/ na na na haploid bacteria 3740238 3737238 44.000000 1 1 31 NCBI RefSeq GCF_000258725.1-RS_2026_01_30 2026-01-30 3835 3595 104 22815439 GCF_000258765.1 PRJNA224116 SAMN02470140 AJLT00000000.1 reference genome 1167637 1167637 Gillisia marina strain=CBA3202 na latest Contig Major Full 2012-04-13 CBA3202_1.0 Korea Basic Science Institute (KBSI) GCA_000258765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/765/GCF_000258765.1_CBA3202_1.0/ na assembly from type material na haploid bacteria 2981404 2981404 35.000000 0 116 116 NCBI RefSeq GCF_000258765.1-RS_2025_11_21 2025-11-21 2949 2683 41 22740667 GCF_000258785.1 PRJNA224116 SAMN02470174 AJLU00000000.1 na 1169863 562 Escherichia coli NCCP15657 strain=NCCP15657 na latest Contig Major Full 2012-04-13 EscCol1.0 Korea Research Institute of Bioscience and Biotechnology GCA_000258785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/785/GCF_000258785.1_EscCol1.0/ na na na haploid bacteria 5015691 5015691 50.500000 0 93 93 NCBI RefSeq GCF_000258785.1-RS_2025_06_09 2025-06-09 5046 4722 127 22740674 GCF_000258845.1 PRJNA224116 SAMN02472263 AIHX00000000.1 na 102618 210 Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 strain=CCUG 17874 na latest Contig Major Full 2012-04-16 ASM25884v1 Microbiology Dept, University College Cork GCA_000258845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/845/GCF_000258845.1_ASM25884v1/ na assembly from type material na haploid bacteria 1600513 1600513 39.000000 0 163 163 NCBI RefSeq GCF_000258845.1-RS_2025_04_07 2025-04-07 1664 1452 41 22493206 GCF_000258865.1 PRJNA224116 SAMN02470906 AICK00000000.1 na 1144303 562 Escherichia coli J53 strain=J53 na latest Contig Major Full 2012-04-16 ASM25886v1 Seoul National University GCA_000258865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/865/GCF_000258865.1_ASM25886v1/ na na na haploid bacteria 4650823 4650823 51.000000 0 42 42 NCBI RefSeq GCF_000258865.1-RS_2025_06_09 2025-06-09 4548 4243 94 22740669 GCF_000258885.1 PRJNA224116 SAMN02603474 na na 768494 1392 Bacillus anthracis str. H9401 strain=H9401 na latest Complete Genome Major Full 2012-04-17 ASM25888v1 Korea Center for Disease Control & Prevention GCA_000258885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/885/GCF_000258885.1_ASM25888v1/ na na na haploid bacteria 5495471 5495471 35.000000 3 3 3 NCBI RefSeq GCF_000258885.1-RS_2026_03_15 2026-03-15 5767 5233 131 22815438 GCF_000258905.1 PRJNA224116 SAMN02604190 na na 1126011 1639 Listeria monocytogenes 07PF0776 strain=07PF0776 na latest Complete Genome Major Full 2012-04-17 ASM25890v1 University of Illinois at Chicago GCA_000258905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/905/GCF_000258905.1_ASM25890v1/ na na na haploid bacteria 2901562 2901562 38.000000 1 1 1 NCBI RefSeq GCF_000258905.1-RS_2025_04_26 2025-04-26 2902 2754 89 22689239 GCF_000258925.1 PRJNA224116 SAMN02471767 AJFQ00000000.1 na 1117644 29555 Mycoplasmopsis canis PG 14 strain=PG 14 na latest Contig Major Full 2012-04-17 ASM25892v1 University of Florida GCA_000258925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/925/GCF_000258925.1_ASM25892v1/ na assembly from type material na haploid bacteria 867208 867208 27.000000 0 6 6 NCBI RefSeq GCF_000258925.1-RS_2026_02_26 2026-02-26 714 676 36 22815452 GCF_000258945.1 PRJNA224116 SAMN02471766 AJFR00000000.1 na 1131452 29555 Mycoplasmopsis canis UF31 strain=UF31 na latest Contig Major Full 2012-04-17 ASM25894v1 University of Florida GCA_000258945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/945/GCF_000258945.1_ASM25894v1/ na na na haploid bacteria 862059 862059 27.000000 0 5 5 NCBI RefSeq GCF_000258945.1-RS_2026_02_26 2026-02-26 703 661 36 22815452 GCF_000258965.1 PRJNA224116 SAMN02471771 AJFS00000000.1 na 1131453 29555 Mycoplasmopsis canis UF33 strain=UF33 na latest Contig Major Full 2012-04-17 ASM25896v1 University of Florida GCA_000258965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/965/GCF_000258965.1_ASM25896v1/ na na na haploid bacteria 869506 869506 27.000000 0 5 5 NCBI RefSeq GCF_000258965.1-RS_2026_02_26 2026-02-26 697 659 36 22815452 GCF_000258985.1 PRJNA224116 SAMN02471765 AJFT00000000.1 na 1131454 29555 Mycoplasmopsis canis UFG1 strain=UFG1 na latest Contig Major Full 2012-04-17 ASM25898v1 University of Florida GCA_000258985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/258/985/GCF_000258985.1_ASM25898v1/ na na na haploid bacteria 868614 868614 27.000000 0 5 5 NCBI RefSeq GCF_000258985.1-RS_2026_02_26 2026-02-26 690 651 36 22815452 GCF_000259005.1 PRJNA224116 SAMN02471774 AJFU00000000.1 na 1131455 29555 Mycoplasmopsis canis UFG4 strain=UFG4 na latest Contig Major Full 2012-04-17 ASM25900v1 University of Florida GCA_000259005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/005/GCF_000259005.1_ASM25900v1/ na na na haploid bacteria 867444 867444 27.000000 0 6 6 NCBI RefSeq GCF_000259005.1-RS_2026_02_26 2026-02-26 690 650 36 22815452 GCF_000259025.1 PRJNA224116 SAMN02471032 AJHI00000000.1 na 1134459 287 Pseudomonas aeruginosa PADK2_CF510 strain=PADK2_CF510 na latest Contig Major Full 2012-04-17 ASM25902v1 DTU Systems Biology GCA_000259025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/025/GCF_000259025.1_ASM25902v1/ na na na haploid bacteria 6683163 6683163 66.000000 0 71 71 NCBI RefSeq GCF_000259025.1-RS_2025_05_24 2025-05-24 6356 6005 80 22672046 GCF_000259075.1 PRJNA224116 SAMN02469978 AJKI00000000.1 reference genome 1168289 989 Marinilabilia salmonicolor JCM 21150 strain=JCM 21150 na latest Contig Major Full 2012-04-17 ASM25907v1 Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036 GCA_000259075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/075/GCF_000259075.1_ASM25907v1/ na assembly from type material na haploid bacteria 4982627 4982627 42.000000 0 72 72 NCBI RefSeq GCF_000259075.1-RS_2025_11_21 2025-11-21 3843 3774 57 22740671 GCF_000259115.1 PRJNA224116 SAMN02470762 AJMP00000000.1 na 1165091 184924 Pseudoalteromonas flavipulchra JG1 strain=JG1 na latest Scaffold Major Full 2012-06-11 ASM25911v1 Ocean university of china GCA_000259115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/115/GCF_000259115.1_ASM25911v1/ na na na haploid bacteria 5503991 5499106 43.000000 0 61 118 NCBI RefSeq GCF_000259115.1-RS_2025_08_19 2025-08-19 4902 4728 115 22740664 GCF_000259135.1 PRJNA224116 SAMN02470913 AJPQ00000000.1 na 1089445 562 Escherichia coli AI27 strain=AI27 na latest Contig Major Full 2012-04-17 ECAI27.hybrid.1 Seoul National University GCA_000259135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/135/GCF_000259135.1_ECAI27.hybrid.1/ na na na haploid bacteria 4901168 4901168 50.500000 0 262 262 NCBI RefSeq GCF_000259135.1-RS_2025_06_09 2025-06-09 4936 4651 78 23144394 GCF_000259155.4 PRJNA224116 SAMN02603749 na na 1087451 1719 Corynebacterium pseudotuberculosis 31 strain=31 na latest Complete Genome Major Full 2019-12-13 ASM25915v4 Rede Paraense de Genomica e Proteomica GCA_000259155.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/155/GCF_000259155.4_ASM25915v4/ na na na haploid bacteria 2404921 2404921 52.000000 1 1 1 NCBI RefSeq GCF_000259155.4-RS_2026_04_23 2026-04-23 2200 2082 66 23144408;31705053 GCF_000259175.1 PRJNA224116 SAMN02604304 na na 1157951 588 Providencia stuartii MRSN 2154 strain=MRSN 2154 na latest Complete Genome Major Full 2012-04-18 ASM25917v1 Walter Reed Army Institute of Research GCA_000259175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/175/GCF_000259175.1_ASM25917v1/ na na na haploid bacteria 4402109 4402109 41.500000 1 1 1 NCBI RefSeq GCF_000259175.1-RS_2026_03_11 2026-03-11 4200 3917 101 22740665 GCF_000259215.1 PRJNA224116 SAMN02470884 AJRK00000000.1 na 1132509 332168 Halococcus hamelinensis 100A6 strain=100A6 na latest Contig Major Full 2012-04-18 ASM25921v1 School of Biotechnology and Biomolecular Sciences GCA_000259215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/215/GCF_000259215.1_ASM25921v1/ na assembly from type material na haploid archaea 3383679 3383679 65.500000 0 453 453 NCBI RefSeq GCF_000259215.1-RS_2025_12_02 2025-12-02 3660 3464 50 22461544 GCF_000259235.1 PRJNA224116 SAMN02603197 na na 1163743 210 Helicobacter pylori HUP-B14 strain=HUP-B14 na latest Complete Genome Major Full 2012-04-19 ASM25923v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000259235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/235/GCF_000259235.1_ASM25923v1/ na na na haploid bacteria 1607584 1607584 39.000000 2 2 2 NCBI RefSeq GCF_000259235.1-RS_2026_01_10 2026-01-10 1550 1429 45 na GCF_000259255.1 PRJNA224116 SAMN02603199 na na 182217 138563 Helicobacter cetorum MIT 00-7128 strain=MIT 00-7128 na latest Complete Genome Major Full 2012-04-19 ASM25925v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000259255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/255/GCF_000259255.1_ASM25925v1/ na na na haploid bacteria 1960111 1960111 34.500000 2 2 2 NCBI RefSeq GCF_000259255.1-RS_2025_03_13 2025-03-13 1818 1714 48 na GCF_000259275.1 PRJNA224116 SAMN02603198 na reference genome 1163745 138563 Helicobacter cetorum MIT 99-5656 strain=MIT 99-5656 na latest Complete Genome Major Full 2012-04-19 ASM25927v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000259275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/275/GCF_000259275.1_ASM25927v1/ na assembly from type material na haploid bacteria 1847790 1847790 35.500000 2 2 2 NCBI RefSeq GCF_000259275.1-RS_2026_01_12 2026-01-12 1783 1651 46 24358262 GCF_000259295.1 PRJNA224116 SAMN02470815 AHHF00000000.1 na 866909 29498 Vibrio tubiashii NCIMB 1337 = ATCC 19106 strain=NCIMB 1337 na latest Contig Major Full 2012-04-19 ASM25929v1 Plymouth Marine Laboratory GCA_000259295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/295/GCF_000259295.1_ASM25929v1/ na na na haploid bacteria 5328293 5328293 45.000000 0 125 125 NCBI RefSeq GCF_000259295.1-RS_2026_04_04 2026-04-04 4943 4840 66 21677855 GCF_000259315.1 PRJNA224116 SAMN02471189 AENQ00000000.1 na 929793 199 Campylobacter concisus UNSWCD strain=UNSWCD na latest Contig Major Full 2012-04-19 ASM25931v1 University of New South Wales GCA_000259315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/315/GCF_000259315.1_ASM25931v1/ na na na haploid bacteria 1778912 1778912 40.000000 0 86 86 NCBI RefSeq GCF_000259315.1-RS_2025_05_18 2025-05-18 1864 1784 39 21829448 GCF_000259345.1 PRJNA224116 SAMN02604274 na na 1155096 29520 Borrelia crocidurae str. Achema strain=Achema na latest Chromosome Major Full 2012-04-20 ASM25934v1 URMITE GCA_000259345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/345/GCF_000259345.1_ASM25934v1/ na na na haploid bacteria 1528893 1449092 28.000000 40 40 136 NCBI RefSeq GCF_000259345.1-RS_2025_07_09 2025-07-09 1449 1229 38 22740657 GCF_000259365.1 PRJNA224116 SAMN02603480 na na 1127744 1127744 Bacillus sp. JS strain=JS na latest Complete Genome Major Full 2012-04-20 ASM25936v1 Korea Research Institute of Bioscience and Biotechnology GCA_000259365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/365/GCF_000259365.1_ASM25936v1/ na na na haploid bacteria 4120406 4120406 44.000000 1 1 1 NCBI RefSeq GCF_000259365.1-RS_2025_08_27 2025-08-27 4193 3963 121 22740679 GCF_000259385.1 PRJNA224116 SAMN02470175 AJMB00000000.1 na 1169663 562 Escherichia coli NCCP15647 strain=NCCP15647 na latest Contig Major Full 2012-04-23 NCCP15647_1.0 KRIBB GCA_000259385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/385/GCF_000259385.1_NCCP15647_1.0/ na na na haploid bacteria 5146299 5146299 50.500000 0 126 126 NCBI RefSeq GCF_000259385.1-RS_2025_04_26 2025-04-26 5174 4849 93 22740672 GCF_000259405.1 PRJNA224116 SAMN02470191 AJST00000000.1 na 1127743 1127743 Bacillus sp. 5B6 strain=5B6 na latest Contig Major Full 2012-04-23 ASM25940v1 Korea Research Institute of Bioscience and Biotechnology GCA_000259405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/405/GCF_000259405.1_ASM25940v1/ na na na haploid bacteria 3899657 3899657 46.500000 0 1 1 NCBI RefSeq GCF_000259405.1-RS_2025_08_27 2025-08-27 3853 3660 121 22740678 GCF_000259425.1 PRJNA224116 SAMN02470124 AJQW00000000.1 na 1167694 562 Escherichia coli O32:H37 str. P4 strain=P4 na latest Contig Major Full 2012-04-23 ASM25942v1 Kimron Veterinary Institute GCA_000259425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/425/GCF_000259425.1_ASM25942v1/ na na na haploid bacteria 4872465 4872465 50.500000 0 72 72 NCBI RefSeq GCF_000259425.1-RS_2025_06_08 2025-06-08 4779 4417 83 22740662 GCF_000259445.1 PRJNA224116 SAMN02470120 AJJO00000000.1 na 1150615 346 Xanthomonas citri pv. glycines str. 12-2 strain=2-Dec na latest Contig Major Full 2012-04-23 Xag Kasetsart University GCA_000259445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/445/GCF_000259445.1_Xag/ na na na haploid bacteria 5265866 5265866 64.500000 0 465 465 NCBI RefSeq GCF_000259445.1-RS_2026_05_17 2026-05-17 4911 4513 96 na GCF_000259485.1 PRJNA224116 SAMN00761858 AJMW00000000.1 na 1095745 729 Haemophilus parainfluenzae HK262 strain=HK262 na latest Contig Major Full 2012-04-23 HparainfluenzaeHK262v1.0 J. Craig Venter Institute GCA_000259485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/485/GCF_000259485.1_HparainfluenzaeHK262v1.0/ na na na haploid bacteria 2107814 2107814 39.000000 0 68 68 NCBI RefSeq GCF_000259485.1-RS_2025_03_19 2025-03-19 2047 1967 44 na GCF_000259505.1 PRJNA224116 SAMN00761857 AJMM00000000.1 na 1095727 1095727 Streptococcus sp. SK643 strain=SK643 na latest Contig Major Full 2012-04-23 SspSK643v1.0 J. Craig Venter Institute GCA_000259505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/505/GCF_000259505.1_SspSK643v1.0/ na na na haploid bacteria 1860312 1860312 39.000000 0 31 31 NCBI RefSeq GCF_000259505.1-RS_2025_08_25 2025-08-25 1833 1750 36 na GCF_000259525.1 PRJNA224116 SAMN00761856 AJML00000000.1 na 1095726 1095726 Streptococcus sp. SK140 strain=SK140 na latest Contig Major Full 2012-04-23 SspSK140v1.0 J. Craig Venter Institute GCA_000259525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/525/GCF_000259525.1_SspSK140v1.0/ na na na haploid bacteria 1902560 1902560 39.500000 0 46 46 NCBI RefSeq GCF_000259525.1-RS_2025_08_25 2025-08-25 1886 1804 31 na GCF_000259545.1 PRJNA224116 SAMN02603505 na na 584721 747 Pasteurella multocida subsp. multocida str. 3480 strain=3480 na latest Complete Genome Major Full 2012-04-24 ASM25954v1 Laboratory for Genomics and Bioinformatics, University of Oklahoma Health Sciences Center GCA_000259545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/545/GCF_000259545.1_ASM25954v1/ na na na haploid bacteria 2378127 2378127 40.500000 1 1 1 NCBI RefSeq GCF_000259545.1-RS_2026_01_30 2026-01-30 2270 2137 78 na GCF_000259695.1 PRJNA224116 SAMN02469360 AJRI00000000.1 na 1163386 562 Escherichia coli LCT-EC106 strain=LCT-EC106 na latest Scaffold Major Full 2012-04-27 ASM25969v1 Escherichia coli GCA_000259695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/695/GCF_000259695.1_ASM25969v1/ na na na haploid bacteria 5212598 5120061 50.500000 0 37 201 NCBI RefSeq GCF_000259695.1-RS_2025_06_09 2025-06-09 5103 4744 77 22843582 GCF_000259715.1 PRJNA224116 SAMN00780326 AJGE00000000.1 na 1144271 1280 Staphylococcus aureus subsp. aureus 118 strain=118 na latest Contig Major Full 2012-04-27 S_aureus_118_1 National Center for Biological Sciences GCA_000259715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/715/GCF_000259715.1_S_aureus_118_1/ na na na haploid bacteria 2761398 2761398 32.500000 0 78 78 NCBI RefSeq GCF_000259715.1-RS_2025_04_26 2025-04-26 2747 2637 32 22740659 GCF_000259735.1 PRJNA224116 SAMN02471975 AHJA00000000.1 na 1085027 28450 Burkholderia pseudomallei 1026a strain=1026a na latest Contig Major Full 2012-04-27 ASM25973v1 University of Washington GCA_000259735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/735/GCF_000259735.1_ASM25973v1/ na na na haploid bacteria 7156856 7156856 68.000000 0 291 291 NCBI RefSeq GCF_000259735.1-RS_2025_04_18 2025-04-18 6646 6332 87 22615773 GCF_000259775.1 PRJNA224116 SAMN02471976 AHJC00000000.1 na 1086033 28450 Burkholderia pseudomallei 1258b strain=1258b na latest Contig Major Full 2012-04-27 ASM25977v1 University of Washington GCA_000259775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/775/GCF_000259775.1_ASM25977v1/ na na na haploid bacteria 7076126 7076126 68.000000 0 352 352 NCBI RefSeq GCF_000259775.1-RS_2025_04_20 2025-04-20 6479 6216 46 22615773 GCF_000259795.1 PRJNA224116 SAMN02471990 AHJD00000000.1 na 1086036 28450 Burkholderia pseudomallei 354e strain=354e na latest Contig Major Full 2012-04-27 ASM25979v1 University of Washington GCA_000259795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/795/GCF_000259795.1_ASM25979v1/ na na na haploid bacteria 7111387 7111387 68.000000 0 338 338 NCBI RefSeq GCF_000259795.1-RS_2025_04_20 2025-04-20 6581 6282 78 22615773 GCF_000259815.1 PRJNA224116 SAMN02471985 AGVS00000000.1 na 1086034 28450 Burkholderia pseudomallei 354a strain=354a na latest Contig Major Full 2012-04-27 ASM25981v1 University of Washington GCA_000259815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/815/GCF_000259815.1_ASM25981v1/ na na na haploid bacteria 7177819 7177819 68.000000 0 907 907 NCBI RefSeq GCF_000259815.1-RS_2025_04_20 2025-04-20 6969 6482 90 22615773 GCF_000259875.1 PRJNA224116 SAMN02469786 AGIE00000000.1 na 1088888 680 Vibrio campbellii DS40M4 strain=DS40M4 na latest Contig Major Full 2011-11-28 ASM25987v1 Universidade Federal Do Rio De Janeiro GCA_000259875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/875/GCF_000259875.1_ASM25987v1/ na na na haploid bacteria 5124098 5124098 45.000000 0 121 121 NCBI RefSeq GCF_000259875.1-RS_2026_03_20 2026-03-20 4838 4594 85 22275102 GCF_000259895.1 PRJNA224116 SAMN02469879 AGNH00000000.1 na 1073567 1073567 Streptomyces sp. TOR3209 strain=TOR3209 na latest Contig Major Full 2011-12-05 ASM25989v1 Institute of Genetics and Physiology?Hebei Academy of Agriculture and Forestry Sciences GCA_000259895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/895/GCF_000259895.1_ASM25989v1/ na na na haploid bacteria 8013370 8013370 72.500000 0 729 729 NCBI RefSeq GCF_000259895.1-RS_2025_08_27 2025-08-27 7591 7184 83 22374957 GCF_000259915.1 PRJNA224116 SAMN02471881 AHGR00000000.1 na 1089447 714 Aggregatibacter actinomycetemcomitans RhAA1 strain=RhAA1 na latest Contig Major Full 2011-12-09 ASM25991v1 University of Medicine and Dentistry of New Jersey GCA_000259915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/915/GCF_000259915.1_ASM25991v1/ na na na haploid bacteria 2233070 2233070 44.500000 0 11 11 NCBI RefSeq GCF_000259915.1-RS_2026_03_28 2026-03-28 2221 2111 51 22328766 GCF_000259935.1 PRJNA224116 SAMN02469604 AHHQ00000000.1 na 1125980 669 Vibrio harveyi CAIM 1792 strain=CAIM 1792 na latest Contig Major Full 2012-02-03 ASM25993v1 CIAD, A.C. GCA_000259935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/935/GCF_000259935.1_ASM25993v1/ na na na haploid bacteria 5827413 5827413 44.500000 0 86 86 NCBI RefSeq GCF_000259935.1-RS_2026_03_28 2026-03-28 5302 5169 66 22461546 GCF_000259955.1 PRJNA224116 SAMN02471022 AHKO00000000.1 na 400971 160791 Rhizorhabdus wittichii DP58 strain=DP58 na latest Contig Major Full 2012-02-09 ASM25995v1 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000259955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/259/955/GCF_000259955.1_ASM25995v1/ na na na haploid bacteria 5628887 5628887 68.000000 0 739 739 NCBI RefSeq GCF_000259955.1-RS_2026_03_03 2026-03-03 5704 5453 52 22689229 GCF_000260015.1 PRJNA224116 SAMN02436496 AICH00000000.1 na 904785 1280 Staphylococcus aureus subsp. aureus IS-157 strain=IS-157 na latest Contig Major Full 2012-02-15 SaureusIS157v1.0 J. Craig Venter Institute GCA_000260015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/015/GCF_000260015.1_SaureusIS157v1.0/ na na na haploid bacteria 2973980 2973980 32.500000 0 185 185 NCBI RefSeq GCF_000260015.1-RS_2025_03_19 2025-03-19 3117 2838 66 na GCF_000260115.1 PRJNA224116 SAMN02261416 AJUG00000000.1 reference genome 926559 453852 Galbibacter orientalis DSM 19592 strain=DSM 19592 na latest Scaffold Major Full 2012-05-04 ASM26011v1 JGI GCA_000260115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/115/GCF_000260115.1_ASM26011v1/ na assembly from type material na haploid bacteria 4508243 4508143 33.500000 0 2 3 NCBI RefSeq GCF_000260115.1-RS_2025_11_22 2025-11-22 3949 3841 58 na GCF_000260135.1 PRJNA224116 SAMN02256515 AJUL00000000.1 reference genome 870187 1031 Thiothrix nivea DSM 5205 strain=DSM 5205 na latest Scaffold Major Full 2012-05-04 ASM26013v1 DOE Joint Genome Institute GCA_000260135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/135/GCF_000260135.1_ASM26013v1/ na assembly from type material na haploid bacteria 4691711 4690611 55.000000 0 4 15 NCBI RefSeq GCF_000260135.1-RS_2026_05_01 2026-05-01 4657 4467 54 22675589 GCF_000260195.1 PRJNA309638 SAMN02981379 AGND00000000.1 reference genome 1089451 2502994 Fusarium odoratissimum NRRL 54006 strain=54006 na latest Scaffold Major Full 2014-02-19 FO_II5_V1 Broad Institute GCA_000260195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/195/GCF_000260195.1_FO_II5_V1/ na na na haploid fungi 46553780 46425687 47.500000 0 418 716 Broad Institute Annotation submitted by Broad Institute 2020-08-07 16975 16634 334 na GCF_000260275.1 PRJNA224116 SAMN00116871 AGUA00000000.1 na 904314 170573 Staphylococcus pettenkoferi VCU012 strain=VCU012 na latest Contig Major Full 2011-12-22 ASM26027v1 J. Craig Venter Institute GCA_000260275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/275/GCF_000260275.1_ASM26027v1/ na na na haploid bacteria 2454960 2454960 38.500000 0 116 116 NCBI RefSeq GCF_000260275.1-RS_2025_02_17 2025-02-17 2383 2229 65 na GCF_000260295.1 PRJNA224116 SAMN00116887 AGUB00000000.1 na 904325 1282 Staphylococcus epidermidis VCU071 strain=VCU071 na latest Contig Major Full 2011-12-22 ASM26029v1 J. Craig Venter Institute GCA_000260295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/295/GCF_000260295.1_ASM26029v1/ na na na haploid bacteria 2396372 2396372 32.000000 0 46 46 NCBI RefSeq GCF_000260295.1-RS_2025_02_17 2025-02-17 2315 2176 66 na GCF_000260315.1 PRJNA224116 SAMN00138234 AGTZ00000000.1 na 904313 1280 Staphylococcus aureus subsp. aureus VCU006 strain=VCU006 na latest Contig Major Full 2011-12-22 ASM26031v1 J. Craig Venter Institute GCA_000260315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/315/GCF_000260315.1_ASM26031v1/ na na na haploid bacteria 2679285 2679285 32.500000 0 37 37 NCBI RefSeq GCF_000260315.1-RS_2025_08_25 2025-08-25 2671 2470 61 na GCF_000260335.1 PRJNA224116 SAMN02470767 AICL00000000.1 na 1108963 1624 Ligilactobacillus salivarius SMXD51 strain=SMXD51 na latest Scaffold Major Full 2012-03-16 ASM26033v1 Oniris GCA_000260335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/335/GCF_000260335.1_ASM26033v1/ na na na haploid bacteria 1967690 1967690 33.000000 4 10 10 NCBI RefSeq GCF_000260335.1-RS_2026_01_27 2026-01-27 1921 1725 105 22582370 GCF_000260395.1 PRJNA224116 SAMD00036559 BACO00000000.1 na 1423807 152335 Paucilactobacillus suebicus DSM 5007 = KCTC 3549 strain=KCTC 3549 na latest Contig Major Full 2011-06-27 ASM26039v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/395/GCF_000260395.1_ASM26039v1/ na assembly from type material na haploid bacteria 2656936 2656936 39.000000 0 143 143 NCBI RefSeq GCF_000260395.1-RS_2025_08_08 2025-08-08 2601 2463 62 21914862 GCF_000260415.1 PRJNA224116 SAMD00036560 BACP00000000.1 na 1046596 1618 Liquorilactobacillus mali KCTC 3596 = DSM 20444 strain=KCTC 3596 na latest Contig Major Full 2011-06-27 ASM26041v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/415/GCF_000260415.1_ASM26041v1/ na assembly from type material na haploid bacteria 2652969 2652969 36.000000 0 122 122 NCBI RefSeq GCF_000260415.1-RS_2025_08_09 2025-08-09 2694 2552 63 21742889 GCF_000260435.1 PRJNA224116 SAMD00036561 BACQ00000000.1 na 1423816 57037 Lacticaseibacillus zeae DSM 20178 = KCTC 3804 strain=KCTC 3804 na latest Contig Major Full 2011-06-27 ASM26043v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/435/GCF_000260435.1_ASM26043v1/ na assembly from type material na haploid bacteria 3110326 3110326 48.000000 0 113 113 NCBI RefSeq GCF_000260435.1-RS_2025_08_09 2025-08-09 2989 2817 60 21868802 GCF_000260455.1 PRJNA224116 SAMD00036562 BACR00000000.1 na 1423815 194326 Companilactobacillus versmoldensis DSM 14857 = KCTC 3814 strain=KCTC 3814 na latest Contig Major Full 2011-06-27 ASM26045v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/455/GCF_000260455.1_ASM26045v1/ na assembly from type material na haploid bacteria 2398051 2398051 38.000000 0 102 102 NCBI RefSeq GCF_000260455.1-RS_2025_08_08 2025-08-08 2411 2282 61 21914893 GCF_000260475.1 PRJNA224116 SAMN02470181 AJMD00000000.1 na 1169862 562 Escherichia coli NCCP15658 strain=NCCP15658 na latest Contig Major Full 2012-04-30 NCCP15658v1.0 Korea Research Institute of Bioscience and Biotechnology GCA_000260475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/475/GCF_000260475.1_NCCP15658v1.0/ na na na haploid bacteria 5462312 5462312 50.500000 0 51 51 NCBI RefSeq GCF_000260475.1-RS_2025_03_23 2025-03-23 5491 5017 133 22740673 GCF_000260515.1 PRJNA224116 SAMN02604257 na na 884204 28450 Burkholderia pseudomallei 1026b strain=1026b na latest Complete Genome Major Full 2012-04-30 ASM26051v1 University of Washington GCA_000260515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/515/GCF_000260515.1_ASM26051v1/ na na na haploid bacteria 7231415 7231415 68.000000 2 2 2 NCBI RefSeq GCF_000260515.1-RS_2026_04_03 2026-04-03 6508 6297 77 22615773 GCF_000260535.1 PRJNA224116 SAMN02470889 AJLW00000000.1 na 1169412 1402 Bacillus licheniformis 5-2-D strain=5-2-D na latest Contig Major Full 2012-04-30 Blic5 Shanghai Jiao Tong University GCA_000260535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/535/GCF_000260535.1_Blic5/ na na na haploid bacteria 4161258 4161258 46.000000 0 46 46 NCBI RefSeq GCF_000260535.1-RS_2026_02_06 2026-02-06 4339 4147 101 22815449 GCF_000260555.1 PRJNA224116 SAMN02470888 AJLV00000000.1 na 1169411 1402 Bacillus licheniformis 10-1-A strain=10-1-A na latest Contig Major Full 2012-04-30 Blic10 Shanghai Jiao Tong University GCA_000260555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/555/GCF_000260555.1_Blic10/ na na na haploid bacteria 4317010 4317010 46.000000 0 31 31 NCBI RefSeq GCF_000260555.1-RS_2026_03_20 2026-03-20 4550 4348 95 22815449 GCF_000260575.2 PRJNA224116 SAMN02471414 AJMA00000000.1 na 1162288 36809 Mycobacteroides abscessus M154 strain=M154 na latest Contig Minor Full 2012-04-30 ASM26057v2 Universiti Malaya, Kuala Lumpur GCA_000260575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/575/GCF_000260575.2_ASM26057v2/ na na na haploid bacteria 4794504 4794504 64.500000 0 40 40 NCBI RefSeq GCF_000260575.2-RS_2026_03_21 2026-03-21 4720 4598 51 22887675 GCF_000260595.1 PRJNA224116 SAMN02471412 AJLZ00000000.1 na 1162287 36809 Mycobacteroides abscessus M115 strain=M115 na latest Contig Major Full 2012-04-30 ASM26059v1 Universiti Malaya, Kuala Lumpur GCA_000260595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/595/GCF_000260595.1_ASM26059v1/ na na na haploid bacteria 4975940 4975940 64.000000 0 47 47 NCBI RefSeq GCF_000260595.1-RS_2025_07_31 2025-07-31 4985 4844 53 22887681 GCF_000260615.2 PRJNA224116 SAMN02471408 AJLY00000000.2 na 1162284 36809 Mycobacteroides abscessus M24 strain=M24 na latest Contig Major Full 2013-07-22 M24_version02 Universiti Malaya, Kuala Lumpur GCA_000260615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/615/GCF_000260615.2_M24_version02/ na na na haploid bacteria 5488620 5488620 64.000000 0 67 67 NCBI RefSeq GCF_000260615.2-RS_2026_03_21 2026-03-21 5599 5418 90 22843600 GCF_000260635.1 PRJNA224116 SAMD00036563 BACS00000000.1 na 1046599 89059 Ligilactobacillus acidipiscis KCTC 13900 strain=KCTC 13900 na latest Contig Major Full 2011-06-27 ASM26063v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/635/GCF_000260635.1_ASM26063v1/ na assembly from heterotypic synonym type material na haploid bacteria 2286440 2286440 39.000000 0 487 487 NCBI RefSeq GCF_000260635.1-RS_2025_08_09 2025-08-09 2328 2093 58 21742864 GCF_000260655.1 PRJNA224116 SAMN00761806 AJMT00000000.1 na 1095748 490 Neisseria sicca VK64 strain=VK64 na latest Contig Major Full 2012-04-30 NsiccaVK64v1.0 J. Craig Venter Institute GCA_000260655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/655/GCF_000260655.1_NsiccaVK64v1.0/ na na na haploid bacteria 2638449 2638449 51.000000 0 210 210 NCBI RefSeq GCF_000260655.1-RS_2025_03_13 2025-03-13 2579 2416 50 na GCF_000260675.1 PRJNA224116 SAMN00761819 AJMU00000000.1 na 1095743 736 Haemophilus paraphrohaemolyticus HK411 strain=HK411 na latest Contig Major Full 2012-04-30 HparaphrohaemolyticusHK411v1.0 J. Craig Venter Institute GCA_000260675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/675/GCF_000260675.1_HparaphrohaemolyticusHK411v1.0/ na na na haploid bacteria 2021208 2021208 41.000000 0 78 78 NCBI RefSeq GCF_000260675.1-RS_2026_02_17 2026-02-17 2044 1937 51 na GCF_000260695.1 PRJNA224116 SAMN00761820 AJMV00000000.1 na 1095733 1318 Streptococcus parasanguinis F0449 strain=F0449 na latest Contig Major Full 2012-04-30 SparasanguinisF0449v1.0 J. Craig Venter Institute GCA_000260695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/695/GCF_000260695.1_SparasanguinisF0449v1.0/ na na na haploid bacteria 2082334 2082334 42.000000 0 134 134 NCBI RefSeq GCF_000260695.1-RS_2025_02_17 2025-02-17 1986 1920 37 na GCF_000260715.1 PRJNA224116 SAMN02603717 na na 703613 28025 Bifidobacterium animalis subsp. animalis ATCC 25527 strain=ATCC 25527 na latest Complete Genome Major Full 2012-04-30 ASM26071v1 Penn State University, Department of Food Science GCA_000260715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/715/GCF_000260715.1_ASM26071v1/ na assembly from type material na haploid bacteria 1932693 1932693 60.500000 1 1 1 NCBI RefSeq GCF_000260715.1-RS_2026_03_20 2026-03-20 1596 1503 66 22118077 GCF_000260755.1 PRJNA224116 SAMN00761850 AJTA00000000.1 na 889204 68892 Streptococcus infantis ATCC 700779 strain=ATCC 700779 na latest Contig Major Full 2012-04-30 SinfantisSK959v1.0 J. Craig Venter Institute GCA_000260755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/755/GCF_000260755.1_SinfantisSK959v1.0/ na assembly from type material na haploid bacteria 1857230 1857230 39.000000 0 53 53 NCBI RefSeq GCF_000260755.1-RS_2026_04_02 2026-04-02 1970 1870 46 na GCF_000260775.1 PRJNA224116 SAMD00036558 BACN00000000.1 na 1122149 176292 Secundilactobacillus malefermentans DSM 5705 = KCTC 3548 strain=KCTC 3548 na latest Contig Major Full 2011-06-27 ASM26077v1 Korea Research Institute of Bioscience and Biotechnology GCA_000260775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/775/GCF_000260775.1_ASM26077v1/ na assembly from type material na haploid bacteria 2003922 2003922 41.000000 0 172 172 NCBI RefSeq GCF_000260775.1-RS_2025_08_08 2025-08-08 2059 1942 70 21914865 GCF_000260795.1 PRJNA224116 SAMN00828826 AJGU00000000.1 na 1124982 1124982 Treponema sp. JC4 strain=JC4 na latest Contig Major Full 2012-04-10 ASM26079v1 Commonwealth Scientific and Industrial Research Organisation GCA_000260795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/795/GCF_000260795.1_ASM26079v1/ na na na haploid bacteria 3032045 3032045 40.500000 0 147 147 NCBI RefSeq GCF_000260795.1-RS_2024_08_13 2024-08-13 2776 2691 53 22815447 GCF_000260815.1 PRJNA224116 SAMN02470011 AJJH00000000.1 na 1165867 37919 Rhodococcus opacus RKJ300 = JCM 13270 strain=RKJ300 na latest Contig Major Full 2012-04-10 ASM26081v1 Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036 GCA_000260815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/815/GCF_000260815.1_ASM26081v1/ na assembly from heterotypic synonym type material na haploid bacteria 8231340 8231340 67.000000 0 178 178 NCBI RefSeq GCF_000260815.1-RS_2026_03_20 2026-03-20 7963 7480 57 22689233 GCF_000260835.1 PRJNA224116 SAMN02469995 AJJU00000000.1 na 946077 1165090 Imtechella halotolerans K1 strain=K1 na latest Contig Major Full 2012-04-10 ASM26083v1 Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036 GCA_000260835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/835/GCF_000260835.1_ASM26083v1/ na assembly from type material na haploid bacteria 3086951 3086951 35.500000 0 44 44 NCBI RefSeq GCF_000260835.1-RS_2026_03_31 2026-03-31 2753 2692 44 22740661 GCF_000260965.1 PRJNA224116 SAMN02603343 na reference genome 754477 754477 Methylophaga frappieri strain=JAM7 na latest Complete Genome Major Full 2012-05-03 ASM26096v1 INRS-Institut Armand-Frappier GCA_000260965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/965/GCF_000260965.1_ASM26096v1/ na assembly from type material na haploid bacteria 2745290 2745290 48.000000 2 2 2 NCBI RefSeq GCF_000260965.1-RS_2026_03_28 2026-03-28 2671 2597 54 22815445 GCF_000260985.4 PRJNA224116 SAMN02603342 na reference genome 754476 754476 Methylophaga nitratireducenticrescens strain=JAM1 na latest Complete Genome Major Full 2017-06-27 ASM26098v3 INRS-Institut Armand-Frappier GCA_000260985.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/260/985/GCF_000260985.4_ASM26098v3/ na assembly from type material na haploid bacteria 3137100 3137100 44.500000 1 1 1 NCBI RefSeq GCF_000260985.4-RS_2025_12_11 2025-12-11 3006 2923 57 22815445;23148104 GCF_000261005.1 PRJNA224116 SAMN02469491 AJQU00000000.1 na 794846 794846 Sinorhizobium sp. CCBAU 05631 strain=CCBAU 05631 na latest Contig Major Full 2012-05-03 05631 China Agricultural University GCA_000261005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/005/GCF_000261005.1_05631/ na na na haploid bacteria 6297759 6297759 62.500000 0 242 242 NCBI RefSeq GCF_000261005.1-RS_2024_06_01 2024-06-01 6105 5717 54 22586130 GCF_000261025.1 PRJNA224116 SAMN02603988 na na 246198 28131 Prevotella intermedia 17 strain=17 na latest Complete Genome Major Full 2012-05-04 ASM26102v1 TIGR GCA_000261025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/025/GCF_000261025.1_ASM26102v1/ na na na haploid bacteria 2699437 2699437 43.500000 2 2 2 NCBI RefSeq GCF_000261025.1-RS_2025_12_06 2025-12-06 2304 2163 65 na GCF_000261045.2 PRJNA224116 SAMN02470676 na na 1154756 2338073 Serratia inhibens PRI-2C strain=PRI-2C na latest Complete Genome Major Full 2016-07-15 ASM26104v2 NIOO-KNAW GCA_000261045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/045/GCF_000261045.2_ASM26104v2/ na na na haploid bacteria 5474685 5474685 55.500000 1 1 1 NCBI RefSeq GCF_000261045.2-RS_2026_03_05 2026-03-05 5148 4934 121 22815440 GCF_000261085.1 PRJNA224116 SAMN02471409 AJSC00000000.1 na 1162283 36809 Mycobacteroides abscessus subsp. bolletii M18 strain=M18 na latest Contig Major Full 2012-05-04 ASM26108v1 Universiti Malaya, Kuala Lumpur GCA_000261085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/085/GCF_000261085.1_ASM26108v1/ na na na haploid bacteria 4886939 4886939 64.000000 0 34 34 NCBI RefSeq GCF_000261085.1-RS_2025_07_31 2025-07-31 4872 4763 51 22815444 GCF_000261105.1 PRJNA224116 SAMN02471413 AJSD00000000.1 na 1162285 36809 Mycobacteroides abscessus M159 strain=M159 na latest Contig Major Full 2012-05-04 ASM26110v1 Universiti Malaya, Kuala Lumpur GCA_000261105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/105/GCF_000261105.1_ASM26110v1/ na na na haploid bacteria 4935864 4935864 64.500000 0 118 118 NCBI RefSeq GCF_000261105.1-RS_2025_08_01 2025-08-01 4929 4739 54 23990576 GCF_000261125.1 PRJNA224116 SAMN02471419 AJSE00000000.1 na 1162286 36809 Mycobacteroides abscessus M172 strain=M172 na latest Contig Major Full 2012-05-04 ASM26112v1 Universiti Malaya, Kuala Lumpur GCA_000261125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/125/GCF_000261125.1_ASM26112v1/ na na na haploid bacteria 5204460 5204460 64.000000 0 33 33 NCBI RefSeq GCF_000261125.1-RS_2025_08_01 2025-08-01 5271 5137 54 22933758 GCF_000261145.1 PRJNA224116 SAMN02596697 AEVZ00000000.1 na 656421 562 Escherichia coli M919 strain=M919 na latest Scaffold Major Full 2012-05-10 Esch_coli_M919_V2 Broad Institute GCA_000261145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/145/GCF_000261145.1_Esch_coli_M919_V2/ na na na haploid bacteria 5403974 5246303 50.500000 0 21 118 NCBI RefSeq GCF_000261145.1-RS_2025_06_13 2025-06-13 5253 4882 98 na GCF_000261165.1 PRJNA224116 SAMN02469359 AJLP00000000.1 na 1163749 1280 Staphylococcus aureus subsp. aureus LCT-SA112 strain=LCT-SA112 na latest Scaffold Major Full 2012-06-13 ASM26116v1 BGI GCA_000261165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/165/GCF_000261165.1_ASM26116v1/ na na na haploid bacteria 2793131 2750696 32.500000 0 6 72 NCBI RefSeq GCF_000261165.1-RS_2025_04_26 2025-04-26 2734 2603 42 22815443 GCF_000261205.1 PRJNA224116 SAMN00829155 AJTJ00000000.1 na 1161745 216816 Bifidobacterium longum subsp. longum 2-2B strain=2-2B na latest Contig Major Full 2012-05-04 Blongum22Bv1.0 JCVI GCA_000261205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/205/GCF_000261205.1_Blongum22Bv1.0/ na na na haploid bacteria 2625697 2625697 59.500000 0 141 141 NCBI RefSeq GCF_000261205.1-RS_2026_01_23 2026-01-23 2411 2153 88 23682142 GCF_000261225.1 PRJNA224116 SAMN00829158 AJTI00000000.1 na 1161904 216816 Bifidobacterium longum subsp. longum 35B strain=35B na latest Contig Major Full 2012-05-04 Blongum35Bv1.0 JCVI GCA_000261225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/225/GCF_000261225.1_Blongum35Bv1.0/ na na na haploid bacteria 2514431 2514431 60.000000 0 131 131 NCBI RefSeq GCF_000261225.1-RS_2025_12_31 2025-12-31 2245 2003 67 23682142 GCF_000261245.1 PRJNA224116 SAMN00829154 AJTF00000000.1 na 1161744 216816 Bifidobacterium longum subsp. longum 1-6B strain=1-6B na latest Contig Major Full 2012-05-04 Blongum16Bv1.0 JCVI GCA_000261245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/245/GCF_000261245.1_Blongum16Bv1.0/ na na na haploid bacteria 2686768 2686768 59.500000 0 171 171 NCBI RefSeq GCF_000261245.1-RS_2026_01_23 2026-01-23 2457 2276 88 23682142 GCF_000261265.1 PRJNA224116 SAMN00829148 AJTM00000000.1 na 1161743 216816 Bifidobacterium longum subsp. longum 44B strain=44B na latest Contig Major Full 2012-05-04 Blongum44Bv1.0 JCVI GCA_000261265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/265/GCF_000261265.1_Blongum44Bv1.0/ na na na haploid bacteria 2559217 2559217 59.500000 0 62 62 NCBI RefSeq GCF_000261265.1-RS_2026_01_23 2026-01-23 2305 2150 88 23682142 GCF_000261285.1 PRJNA224116 SAMN00761859 AJTC00000000.1 na 1095746 729 Haemophilus parainfluenzae HK2019 strain=HK2019 na latest Contig Major Full 2012-05-04 HparainfluenzaeHK2019v1.0 J. Craig Venter Institute GCA_000261285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/285/GCF_000261285.1_HparainfluenzaeHK2019v1.0/ na na na haploid bacteria 2101432 2101432 39.000000 0 42 42 NCBI RefSeq GCF_000261285.1-RS_2025_08_25 2025-08-25 2060 1986 42 na GCF_000261345.2 PRJNA224116 SAMN02469977 na reference genome 1172567 1908 Streptomyces globisporus C-1027 strain=C-1027 na latest Complete Genome Major Full 2016-01-04 ASM26134v2 Key Laboratory of Biotechnology of Antibiotics of Ministry of Health, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China GCA_000261345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/345/GCF_000261345.2_ASM26134v2/ na na na haploid bacteria 7783599 7783599 71.500000 3 3 3 NCBI RefSeq GCF_000261345.2-RS_2026_03_03 2026-03-03 7022 6776 88 22815456 GCF_000261365.1 PRJNA224116 SAMN02469572 AJVC00000000.1 na 1175306 1175306 Herbaspirillum sp. GW103 strain=GW103 na latest Contig Major Full 2012-05-04 ASM26136v1 Chonbuk National University GCA_000261365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/365/GCF_000261365.1_ASM26136v1/ na na na haploid bacteria 5047645 5047645 62.500000 0 6 6 NCBI RefSeq GCF_000261365.1-RS_2024_08_13 2024-08-13 4596 4497 66 22815460 GCF_000261385.1 PRJNA224116 SAMN02596895 AHWG00000000.1 na 550682 562 Escherichia coli B799 strain=B799 na latest Scaffold Major Full 2012-08-10 Esch_coli_B799_V1 Broad Institute GCA_000261385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/385/GCF_000261385.1_Esch_coli_B799_V1/ na na na haploid bacteria 5393412 5297946 50.500000 0 13 78 NCBI RefSeq GCF_000261385.1-RS_2025_06_14 2025-06-14 5316 5031 95 na GCF_000261405.1 PRJNA224116 SAMN02596894 AHWF00000000.1 na 656413 562 Escherichia coli H730 strain=H730 na latest Scaffold Major Full 2012-08-10 Esch_coli_H730_V1 Broad Institute GCA_000261405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/405/GCF_000261405.1_Esch_coli_H730_V1/ na na na haploid bacteria 5155675 5054119 51.000000 0 10 97 NCBI RefSeq GCF_000261405.1-RS_2025_06_13 2025-06-13 5046 4684 106 na GCF_000261465.1 PRJNA224116 SAMN02471548 AJVA00000000.1 na 1134914 1283 Staphylococcus haemolyticus R1P1 strain=R1P1 na latest Contig Major Full 2012-05-07 ASM26146v1 University of Arizona GCA_000261465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/465/GCF_000261465.1_ASM26146v1/ na na na haploid bacteria 2395399 2395399 32.500000 0 77 77 NCBI RefSeq GCF_000261465.1-RS_2026_02_17 2026-02-17 2418 2267 70 na GCF_000261485.1 PRJNA224116 SAMN02469481 AJQT00000000.1 na 716928 716925 Sinorhizobium sojae CCBAU 05684 strain=CCBAU 05684 na latest Contig Major Full 2012-05-03 05684 China Agricultural University GCA_000261485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/485/GCF_000261485.1_05684/ na assembly from type material na haploid bacteria 5964336 5964336 62.000000 0 231 231 NCBI RefSeq GCF_000261485.1-RS_2025_09_13 2025-09-13 5751 5422 54 22586130 GCF_000261505.1 PRJNA224116 SAMN02469485 AJPV00000000.1 na 1128203 29448 Bradyrhizobium elkanii CCBAU 05737 strain=CCBAU 05737 na latest Contig Major Full 2012-05-03 05737 China Agricultural University GCA_000261505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/505/GCF_000261505.1_05737/ na na na haploid bacteria 9773178 9773178 63.500000 0 751 751 NCBI RefSeq GCF_000261505.1-RS_2026_04_16 2026-04-16 9817 9221 61 22586130 GCF_000261525.1 PRJNA224116 SAMN02469464 AJPW00000000.1 na 1128204 29448 Bradyrhizobium elkanii CCBAU 43297 strain=CCBAU 43297 na latest Contig Major Full 2012-05-03 43297 China Agricultural University GCA_000261525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/525/GCF_000261525.1_43297/ na na na haploid bacteria 9347700 9347700 63.500000 0 654 654 NCBI RefSeq GCF_000261525.1-RS_2026_04_16 2026-04-16 9258 8736 59 22586130 GCF_000261545.1 PRJNA224116 SAMN02469475 AJPX00000000.1 na 1128253 375 Bradyrhizobium japonicum CCBAU 15354 strain=CCBAU 15354 na latest Contig Major Full 2012-05-03 15354 China Agricultural University GCA_000261545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/545/GCF_000261545.1_15354/ na na na haploid bacteria 10126594 10126594 63.500000 0 951 951 NCBI RefSeq GCF_000261545.1-RS_2026_06_21 2026-06-21 10359 9578 55 22586130 GCF_000261565.1 PRJNA224116 SAMN02469482 AJPY00000000.1 na 1128254 375 Bradyrhizobium japonicum CCBAU 15517 strain=CCBAU 15517 na latest Contig Major Full 2012-05-03 15517 China Agricultural University GCA_000261565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/565/GCF_000261565.1_15517/ na na na haploid bacteria 9917031 9917031 63.500000 0 1129 1129 NCBI RefSeq GCF_000261565.1-RS_2026_06_21 2026-06-21 10246 9498 55 22586130 GCF_000261585.1 PRJNA224116 SAMN02469476 AJPZ00000000.1 na 1128255 375 Bradyrhizobium japonicum CCBAU 15618 strain=CCBAU 15618 na latest Contig Major Full 2012-05-03 15618 China Agricultural University GCA_000261585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/585/GCF_000261585.1_15618/ na na na haploid bacteria 9824012 9824012 63.500000 0 691 691 NCBI RefSeq GCF_000261585.1-RS_2026_04_15 2026-04-15 9835 9287 61 22586130 GCF_000261605.1 PRJNA224116 SAMN02469483 AJQA00000000.1 na 1128256 375 Bradyrhizobium japonicum CCBAU 25435 strain=CCBAU 25435 na latest Contig Major Full 2012-05-03 25435 China Agricultural University GCA_000261605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/605/GCF_000261605.1_25435/ na na na haploid bacteria 9460795 9460795 63.500000 0 520 520 NCBI RefSeq GCF_000261605.1-RS_2026_05_26 2026-05-26 9269 8828 60 22586130 GCF_000261625.1 PRJNA224116 SAMN02469465 AJQB00000000.1 na 1128257 375 Bradyrhizobium japonicum CCBAU 83623 strain=CCBAU 83623 na latest Contig Major Full 2012-05-03 83623 China Agricultural University GCA_000261625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/625/GCF_000261625.1_83623/ na na na haploid bacteria 10074298 10074298 63.500000 0 1212 1212 NCBI RefSeq GCF_000261625.1-RS_2026_04_16 2026-04-16 10493 9719 59 22586130 GCF_000261645.1 PRJNA224116 SAMN02469466 AJQC00000000.1 na 1128287 43992 Bradyrhizobium liaoningense CCBAU 05525 strain=CCBAU 05525 na latest Contig Major Full 2012-05-03 05525 China Agricultural University GCA_000261645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/645/GCF_000261645.1_05525/ na na na haploid bacteria 8164124 8164124 64.000000 0 1040 1040 NCBI RefSeq GCF_000261645.1-RS_2026_05_26 2026-05-26 8305 7599 53 22586130 GCF_000261665.1 PRJNA224116 SAMN02469477 AJQD00000000.1 na 1128288 43992 Bradyrhizobium liaoningense CCBAU 83689 strain=CCBAU 83689 na latest Contig Major Full 2012-05-03 83689 China Agricultural University GCA_000261665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/665/GCF_000261665.1_83689/ na na na haploid bacteria 8009819 8009819 64.000000 0 1133 1133 NCBI RefSeq GCF_000261665.1-RS_2025_12_03 2025-12-03 8208 7516 53 22586130 GCF_000261685.1 PRJNA224116 SAMN02469467 AJQE00000000.1 na 2683269 2683269 Bradyrhizobium genomosp. I (2014) strain=CCBAU 43298 na latest Contig Major Full 2012-05-03 43298 China Agricultural University GCA_000261685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/685/GCF_000261685.1_43298/ na na na haploid bacteria 7916986 7916986 64.000000 0 508 508 NCBI RefSeq GCF_000261685.1-RS_2025_08_15 2025-08-15 7774 7385 55 22586130 GCF_000261705.1 PRJNA224116 SAMN02469468 AJQF00000000.1 na 2683271 2683271 Bradyrhizobium genomosp. III strain=CCBAU 15544 na latest Contig Major Full 2012-05-03 15544 China Agricultural University GCA_000261705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/705/GCF_000261705.1_15544/ na na na haploid bacteria 8484383 8484383 63.500000 0 612 612 NCBI RefSeq GCF_000261705.1-RS_2025_08_15 2025-08-15 8308 7855 58 22586130 GCF_000261725.1 PRJNA224116 SAMN02469484 AJQG00000000.1 na 2683271 2683271 Bradyrhizobium genomosp. III strain=CCBAU 15615 na latest Contig Major Full 2012-05-03 15615 China Agricultural University GCA_000261725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/725/GCF_000261725.1_15615/ na na na haploid bacteria 8852539 8852539 63.500000 0 453 453 NCBI RefSeq GCF_000261725.1-RS_2025_08_15 2025-08-15 8558 8091 57 22586130 GCF_000261745.1 PRJNA224116 SAMN02469488 AJQH00000000.1 na 2683271 2683271 Bradyrhizobium genomosp. III strain=CCBAU 15635 na latest Contig Major Full 2012-05-03 15635 China Agricultural University GCA_000261745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/745/GCF_000261745.1_15635/ na na na haploid bacteria 8288715 8288715 64.000000 0 456 456 NCBI RefSeq GCF_000261745.1-RS_2025_08_15 2025-08-15 8033 7646 59 22586130 GCF_000261785.1 PRJNA224116 SAMN02469473 AJQJ00000000.1 na 1128326 108015 Bradyrhizobium yuanmingense CCBAU 05623 strain=CCBAU 05623 na latest Contig Major Full 2012-05-03 05623 China Agricultural University GCA_000261785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/785/GCF_000261785.1_05623/ na na na haploid bacteria 8245751 8245751 64.000000 0 570 570 NCBI RefSeq GCF_000261785.1-RS_2026_04_01 2026-04-01 8174 7736 56 22586130 GCF_000261805.1 PRJNA224116 SAMN02469474 AJQK00000000.1 na 1128327 108015 Bradyrhizobium yuanmingense CCBAU 25021 strain=CCBAU 25021 na latest Contig Major Full 2012-05-03 25021 China Agricultural University GCA_000261805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/805/GCF_000261805.1_25021/ na na na haploid bacteria 7990949 7990949 64.000000 0 490 490 NCBI RefSeq GCF_000261805.1-RS_2026_04_01 2026-04-01 7849 7433 55 22586130 GCF_000261825.1 PRJNA224116 SAMN02469469 AJQL00000000.1 na 1128328 108015 Bradyrhizobium yuanmingense CCBAU 35157 strain=CCBAU 35157 na latest Contig Major Full 2012-05-03 35157 China Agricultural University GCA_000261825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/825/GCF_000261825.1_35157/ na na na haploid bacteria 7854129 7854129 64.000000 0 457 457 NCBI RefSeq GCF_000261825.1-RS_2026_04_01 2026-04-01 7651 7318 59 22586130 GCF_000261845.1 PRJNA224116 SAMN02469489 AJQM00000000.1 na 1128329 380 Sinorhizobium fredii CCBAU 05557 strain=CCBAU 05557 na latest Contig Major Full 2012-05-03 05557 China Agricultural University GCA_000261845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/845/GCF_000261845.1_05557/ na na na haploid bacteria 6587698 6587698 62.500000 0 382 382 NCBI RefSeq GCF_000261845.1-RS_2026_04_24 2026-04-24 6455 6112 59 22586130 GCF_000261865.1 PRJNA224116 SAMN02469478 AJQN00000000.1 na 1128330 380 Sinorhizobium fredii CCBAU 25509 strain=CCBAU 25509 na latest Contig Major Full 2012-05-03 25509 China Agricultural University GCA_000261865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/865/GCF_000261865.1_25509/ na na na haploid bacteria 6580016 6580016 62.000000 0 443 443 NCBI RefSeq GCF_000261865.1-RS_2026_04_23 2026-04-23 6483 6086 57 22586130 GCF_000261885.1 PRJNA224116 SAMN02469479 AJQO00000000.1 na 1128331 380 Sinorhizobium fredii CCBAU 45436 strain=CCBAU 45436 na latest Contig Major Full 2012-05-03 45436 China Agricultural University GCA_000261885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/885/GCF_000261885.1_45436/ na na na haploid bacteria 6815462 6815462 62.000000 0 327 327 NCBI RefSeq GCF_000261885.1-RS_2026_04_23 2026-04-23 6675 6306 72 22586130 GCF_000261905.1 PRJNA224116 SAMN02469480 AJQP00000000.1 na 1128332 380 Sinorhizobium fredii CCBAU 83622 strain=CCBAU 83622 na latest Contig Major Full 2012-05-03 83622 China Agricultural University GCA_000261905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/905/GCF_000261905.1_83622/ na na na haploid bacteria 6567745 6567745 62.500000 0 401 401 NCBI RefSeq GCF_000261905.1-RS_2026_04_23 2026-04-23 6459 6092 58 22586130 GCF_000261925.1 PRJNA224116 SAMN02469486 AJQQ00000000.1 na 1128333 380 Sinorhizobium fredii CCBAU 83643 strain=CCBAU 83643 na latest Contig Major Full 2012-05-03 83643 China Agricultural University GCA_000261925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/925/GCF_000261925.1_83643/ na na na haploid bacteria 6876949 6876949 62.000000 0 438 438 NCBI RefSeq GCF_000261925.1-RS_2026_04_23 2026-04-23 6788 6322 56 22586130 GCF_000261945.1 PRJNA224116 SAMN02469490 AJQR00000000.1 na 1128334 380 Sinorhizobium fredii CCBAU 83666 strain=CCBAU 83666 na latest Contig Major Full 2012-05-03 83666 China Agricultural University GCA_000261945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/945/GCF_000261945.1_83666/ na na na haploid bacteria 6838011 6838011 62.000000 0 536 536 NCBI RefSeq GCF_000261945.1-RS_2026_04_03 2026-04-03 6818 6316 53 22586130 GCF_000261965.1 PRJNA224116 SAMN02469470 AJQS00000000.1 na 1128335 380 Sinorhizobium fredii CCBAU 83753 strain=CCBAU 83753 na latest Contig Major Full 2012-05-03 83753 China Agricultural University GCA_000261965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/965/GCF_000261965.1_83753/ na na na haploid bacteria 6832812 6832812 62.000000 0 417 417 NCBI RefSeq GCF_000261965.1-RS_2026_03_28 2026-03-28 6723 6297 57 22586130 GCF_000261985.1 PRJNA224116 SAMN02415216 AJVD00000000.1 na 1179780 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010-1237 strain=2010-1237 na latest Contig Major Full 2012-05-08 CDC_2010-1237v1.0 Centers for Disease Control & Prevention GCA_000261985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/261/985/GCF_000261985.1_CDC_2010-1237v1.0/ na na na haploid bacteria 4666245 4666245 52.000000 0 44 44 NCBI RefSeq GCF_000261985.1-RS_2025_03_19 2025-03-19 4576 4242 85 na GCF_000262005.1 PRJNA224116 SAMN02470886 AHGZ00000000.1 na 1123524 76759 Pseudomonas monteilii QM strain=QM na latest Contig Major Full 2012-05-08 ASM26200v1 School of Environmental Science and Technology, Dalian University of Technology GCA_000262005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/005/GCF_000262005.1_ASM26200v1/ na na na haploid bacteria 5763138 5763138 62.000000 0 278 278 NCBI RefSeq GCF_000262005.1-RS_2026_01_15 2026-01-15 5553 5314 50 22843591 GCF_000262045.1 PRJNA224116 SAMN02414599 AJVF00000000.1 na 1177185 659243 Bacillus siamensis KCTC 13613 strain=KCTC 13613(T) na latest Contig Major Full 2012-05-08 KCTC_13613_01 KRIBB GCA_000262045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/045/GCF_000262045.1_KCTC_13613_01/ na assembly from type material na haploid bacteria 3779696 3779696 46.500000 0 51 51 NCBI RefSeq GCF_000262045.1-RS_2026_03_24 2026-03-24 3874 3692 86 22815459 GCF_000262065.2 PRJNA224116 SAMN02471394 AJMR00000000.1 na 1149133 1149133 Metapseudomonas furukawaii strain=KF707 na latest Scaffold Major Full 2013-01-18 KF707_a1 Dipartimento di Bioscienze, Biotecnologie e Scienze Farmacologiche GCA_000262065.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/065/GCF_000262065.2_KF707_a1/ na assembly from type material na haploid bacteria 6678055 6678027 65.500000 0 229 231 NCBI RefSeq GCF_000262065.2-RS_2025_12_03 2025-12-03 6342 6118 106 22843571 GCF_000262085.1 PRJNA224116 SAMN02471140 AJTG00000000.1 na 1175629 1377 Aerococcus viridans LL1 strain=LL1 na latest Contig Major Full 2012-05-08 AeroviriLL11.0 Zhejiang University GCA_000262085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/085/GCF_000262085.1_AeroviriLL11.0/ na na na haploid bacteria 1994039 1994039 39.500000 0 31 31 NCBI RefSeq GCF_000262085.1-RS_2025_04_15 2025-04-15 1865 1787 52 22815455 GCF_000262105.1 PRJNA224116 SAMN02469370 AJUP00000000.1 na 1178528 1352 Enterococcus faecium LCT-EF128 strain=LCT-EF128 na latest Scaffold Major Full 2012-06-13 Enterococcus faecium LCT-EF128,version 1.0 BGI-shenzhen GCA_000262105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/105/GCF_000262105.1_Enterococcus_faecium_LCT-EF128_version_1.0/ na na na haploid bacteria 2678262 2593481 38.000000 0 14 114 NCBI RefSeq GCF_000262105.1-RS_2026_03_20 2026-03-20 2535 2430 33 22887667 GCF_000262125.1 PRJNA224116 SAMN02603645 na na 741093 562 Escherichia coli Xuzhou21 strain=Xuzhou21 na latest Complete Genome Major Full 2012-05-09 ASM26212v1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000262125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/125/GCF_000262125.1_ASM26212v1/ na na na haploid bacteria 5516736 5516736 50.500000 3 3 3 NCBI RefSeq GCF_000262125.1-RS_2025_03_20 2025-03-20 5500 5079 123 21346051;22558360 GCF_000262145.1 PRJNA224116 SAMN02603112 na na 1114965 1318 Streptococcus parasanguinis FW213 strain=FW213 na latest Complete Genome Major Full 2012-05-09 ASM26214v1 Chang Gung University GCA_000262145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/145/GCF_000262145.1_ASM26214v1/ na na na haploid bacteria 2171609 2171609 41.500000 1 1 1 NCBI RefSeq GCF_000262145.1-RS_2026_04_18 2026-04-18 2072 1943 77 22529932 GCF_000262165.1 PRJNA224116 SAMN02603851 na na 1168287 1168287 Mycobacterium sp. MOTT36Y strain=MOTT36Y na latest Complete Genome Major Full 2012-05-09 ASM26216v1 Seoul National University College of Medicine GCA_000262165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/165/GCF_000262165.1_ASM26216v1/ na na na haploid bacteria 5613626 5613626 68.000000 1 1 1 NCBI RefSeq GCF_000262165.1-RS_2024_08_13 2024-08-13 5261 5093 52 22815454 GCF_000262205.1 PRJNA224116 SAMN02604140 na na 1163389 299583 Francisella orientalis str. Toba 04 strain=Toba 04 na latest Complete Genome Major Full 2012-05-10 ASM26220v1 University of Bergen GCA_000262205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/205/GCF_000262205.1_ASM26220v1/ na na na haploid bacteria 1847202 1847202 32.000000 1 1 1 NCBI RefSeq GCF_000262205.1-RS_2025_08_24 2025-08-24 2013 1690 43 na GCF_000262225.1 PRJNA224116 SAMN00761801 AJSY00000000.1 na 1095747 859 Fusobacterium necrophorum subsp. funduliforme ATCC 51357 strain=ATCC 51357 na latest Contig Major Full 2012-05-10 ASM26222v1 J. Craig Venter Institute GCA_000262225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/225/GCF_000262225.1_ASM26222v1/ na assembly from type material na haploid bacteria 2110802 2110802 35.000000 0 45 45 NCBI RefSeq GCF_000262225.1-RS_2025_07_29 2025-07-29 2063 2001 41 na GCF_000262245.1 PRJNA224116 SAMN00761813 AJSX00000000.1 reference genome 1095749 752 Pasteurella bettyae CCUG 2042 strain=CCUG 2042 na latest Contig Major Full 2012-05-10 ASM26224v1 J. Craig Venter Institute GCA_000262245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/245/GCF_000262245.1_ASM26224v1/ na assembly from type material na haploid bacteria 2253160 2253160 36.000000 0 47 47 NCBI RefSeq GCF_000262245.1-RS_2025_12_11 2025-12-11 2220 2108 52 na GCF_000262265.1 PRJNA224116 SAMN00761805 AJSW00000000.1 na 1095744 735 Haemophilus parahaemolyticus HK385 strain=HK385 na latest Contig Major Full 2012-05-10 ASM26226v1 J. Craig Venter Institute GCA_000262265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/265/GCF_000262265.1_ASM26226v1/ na assembly from type material na haploid bacteria 2030584 2030584 40.000000 0 61 61 NCBI RefSeq GCF_000262265.1-RS_2026_02_17 2026-02-17 2008 1914 43 na GCF_000262285.1 PRJNA224116 SAMN00761814 AJSV00000000.1 na 1095742 726 Haemophilus haemolyticus HK386 strain=HK386 na latest Contig Major Full 2012-05-10 ASM26228v1 J. Craig Venter Institute GCA_000262285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/285/GCF_000262285.1_ASM26228v1/ na na na haploid bacteria 1822726 1822726 38.500000 0 30 30 NCBI RefSeq GCF_000262285.1-RS_2026_02_17 2026-02-17 1757 1686 46 na GCF_000262305.1 PRJNA224116 SAMN02603253 na reference genome 630626 563 Shimwellia blattae DSM 4481 = NBRC 105725 strain=DSM 4481 na latest Complete Genome Major Full 2012-05-10 ASM26230v1 Georg August University Goettingen GCA_000262305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/305/GCF_000262305.1_ASM26230v1/ na assembly from type material na haploid bacteria 4158725 4158725 56.500000 1 1 1 NCBI RefSeq GCF_000262305.1-RS_2026_03_20 2026-03-20 3953 3754 128 22843577 GCF_000262345.1 PRJNA224116 SAMN02469700 AJTQ00000000.1 reference genome 1565415 1565415 Streptomyces xiaopingdaonensis strain=DUT 180 na latest Contig Major Full 2012-05-11 Streptomyces sulphureus L180, version 1.0 Dalian University of Technology GCA_000262345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/345/GCF_000262345.1_Streptomyces_sulphureus_L180_version_1.0/ na assembly from type material na haploid bacteria 6466982 6466982 72.000000 0 385 385 NCBI RefSeq GCF_000262345.1-RS_2026_03_20 2026-03-20 5784 5574 53 22843605 GCF_000262385.1 PRJNA224116 SAMN02603232 na na 1155777 492670 Bacillus velezensis YAU B9601-Y2 strain=YAU B9601-Y2 na latest Complete Genome Major Full 2012-05-11 ASM26238v1 Faculty of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201 , PR China GCA_000262385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/385/GCF_000262385.1_ASM26238v1/ na na na haploid bacteria 4238624 4238624 46.000000 1 1 1 NCBI RefSeq GCF_000262385.1-RS_2026_06_30 2026-06-30 4268 4048 120 23357245 GCF_000262405.1 PRJNA224116 SAMN02261420 AJUA00000000.1 na 864069 864069 Microvirga lotononidis strain=WSM3557 na latest Scaffold Major Full 2012-05-29 ASM26240v1 JGI GCA_000262405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/405/GCF_000262405.1_ASM26240v1/ na assembly from type material na haploid bacteria 7082538 7073938 63.000000 0 18 104 NCBI RefSeq GCF_000262405.1-RS_2026_04_29 2026-04-29 6949 6606 68 na GCF_000262445.1 PRJNA224116 SAMN02261414 AJUD00000000.1 reference genome 880478 106578 Thermoanaerobacter siderophilus SR4 strain=SR4 na latest Chromosome Major Full 2012-06-19 ASM26244v1 JGI GCA_000262445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/445/GCF_000262445.1_ASM26244v1/ na assembly from type material na haploid bacteria 2540159 2538059 34.000000 1 1 22 NCBI RefSeq GCF_000262445.1-RS_2026_04_23 2026-04-23 2629 2255 69 na GCF_000262465.1 PRJNA224116 SAMN02256510 AJWA00000000.1 na 710111 710111 Frankia sp. QA3 strain=QA3 na latest Chromosome Major Full 2012-06-19 ASM26246v1 DOE Joint Genome Institute GCA_000262465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/465/GCF_000262465.1_ASM26246v1/ na na na haploid bacteria 7590853 7578953 72.500000 1 1 120 NCBI RefSeq GCF_000262465.1-RS_2024_08_13 2024-08-13 6430 6089 51 23516220 GCF_000262525.1 PRJNA224116 SAMN02256546 AJUC00000000.1 reference genome 735332 735331 Leptothrix ochracea L12 strain=L12 na latest Scaffold Major Full 2012-05-29 ASM26252v1 DOE Joint Genome Institute GCA_000262525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/525/GCF_000262525.1_ASM26252v1/ na assembly designated as reftype na haploid bacteria 510792 509591 58.000000 0 36 47 NCBI RefSeq GCF_000262525.1-RS_2026_03_30 2026-03-30 533 473 14 na GCF_000262545.1 PRJNA224116 SAMN02261368 AJVZ00000000.1 reference genome 868129 28125 Prevotella bivia DSM 20514 strain=DSM 20514 na latest Scaffold Major Full 2012-05-29 ASM26254v1 JGI GCA_000262545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/545/GCF_000262545.1_ASM26254v1/ na assembly from type material na haploid bacteria 2521238 2520138 40.000000 0 3 14 NCBI RefSeq GCF_000262545.1-RS_2026_01_08 2026-01-08 2192 2057 65 na GCF_000262615.1 PRJNA224116 SAMN02415289 AJTE00000000.1 na 1169661 28901 Salmonella enterica subsp. enterica serovar Typhi str. UJ816A strain=UJ816A na latest Contig Major Full 2012-05-14 SalTypUJ816A 1.0 University of Hyderabad GCA_000262615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/615/GCF_000262615.1_SalTypUJ816A_1.0/ na na na haploid bacteria 4627917 4627917 52.000000 0 334 334 NCBI RefSeq GCF_000262615.1-RS_2025_04_26 2025-04-26 4820 4324 78 22933755 GCF_000262635.1 PRJNA224116 SAMN02415288 AJTD00000000.1 na 1169660 28901 Salmonella enterica subsp. enterica serovar Typhi str. UJ308A strain=UJ308A na latest Contig Major Full 2012-05-14 SalTypUJ308A 1.0 University of Hyderabad GCA_000262635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/635/GCF_000262635.1_SalTypUJ308A_1.0/ na na na haploid bacteria 4615920 4615920 52.000000 0 416 416 NCBI RefSeq GCF_000262635.1-RS_2025_04_26 2025-04-26 4876 4370 73 22933755 GCF_000262675.1 PRJNA224116 SAMN02603848 na na 1187956 1308 Streptococcus thermophilus MN-ZLW-002 strain=MN-ZLW-002 na latest Complete Genome Major Full 2012-05-14 ASM26267v1 School of Food Science and Engineering, Harbin Institute of Technology GCA_000262675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/675/GCF_000262675.1_ASM26267v1/ na na na haploid bacteria 1848520 1848520 39.000000 1 1 1 NCBI RefSeq GCF_000262675.1-RS_2026_02_06 2026-02-06 1920 1607 76 22843572 GCF_000262695.1 PRJNA224116 SAMN02603481 na na 416344 416344 Burkholderia sp. KJ006 strain=KJ006 na latest Complete Genome Major Full 2012-05-14 ASM26269v1 Korea Research Institute of Bioscience and Biotechnology GCA_000262695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/695/GCF_000262695.1_ASM26269v1/ na na na haploid bacteria 6629912 6629912 67.000000 4 4 4 NCBI RefSeq GCF_000262695.1-RS_2025_08_27 2025-08-27 5950 5759 90 22843575 GCF_000262715.1 PRJNA224116 SAMN02604334 na na 1186051 1186051 Blattabacterium sp. (Blaberus giganteus) strain=BGIGA na latest Complete Genome Major Full 2012-05-14 ASM26271v1 Yale University GCA_000262715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/715/GCF_000262715.1_ASM26271v1/ na na na haploid bacteria 632588 632588 25.500000 2 2 2 NCBI RefSeq GCF_000262715.1-RS_2024_08_13 2024-08-13 619 579 38 22843586 GCF_000262735.1 PRJNA224116 SAMN02470993 ADWW00000000.1 na 796606 1471 Bacillus methanolicus MGA3 strain=MGA3 na latest Contig Major Full 2012-05-14 ASM26273v1 SINTEF Materials and Chemistry GCA_000262735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/735/GCF_000262735.1_ASM26273v1/ na na na haploid bacteria 3398994 3398994 38.500000 2 12 12 NCBI RefSeq GCF_000262735.1-RS_2025_03_23 2025-03-23 3461 3204 101 22610424 GCF_000262755.1 PRJNA224116 SAMN00261231 AFEU00000000.1 reference genome 997296 1471 Bacillus methanolicus PB1 strain=PB1 na latest Contig Major Full 2012-05-14 ASM26275v1 SINTEF Materials and Chemistry GCA_000262755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/755/GCF_000262755.1_ASM26275v1/ na assembly from type material na haploid bacteria 3426513 3426513 39.000000 1 7 7 NCBI RefSeq GCF_000262755.1-RS_2026_03_28 2026-03-28 3420 3186 105 22610424 GCF_000262815.1 PRJNA224116 SAMN02596782 AHBK00000000.1 na 1116214 1280 Staphylococcus aureus subsp. aureus VRS1 strain=VRS1 na latest Contig Major Full 2012-05-15 VRSA01_3 Broad Institute GCA_000262815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/815/GCF_000262815.1_VRSA01_3/ na na na haploid bacteria 2922609 2922609 32.500000 0 123 123 NCBI RefSeq GCF_000262815.1-RS_2025_02_04 2025-02-04 3032 2824 64 22617140 GCF_000262835.1 PRJNA224116 SAMN02596783 AHBL00000000.1 na 1116215 1280 Staphylococcus aureus subsp. aureus VRS2 strain=VRS2 na latest Contig Major Full 2012-05-15 VRSA02_3 Broad Institute GCA_000262835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/835/GCF_000262835.1_VRSA02_3/ na na na haploid bacteria 2973853 2973853 33.000000 0 97 97 NCBI RefSeq GCF_000262835.1-RS_2025_02_08 2025-02-08 3062 2839 72 22617140 GCF_000262855.1 PRJNA224116 SAMN02596784 AHBM00000000.1 na 1116216 1280 Staphylococcus aureus subsp. aureus VRS3a strain=VRS3a na latest Contig Major Full 2012-05-15 VRSA03_3 Broad Institute GCA_000262855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/855/GCF_000262855.1_VRSA03_3/ na na na haploid bacteria 2890074 2890074 32.500000 0 91 91 NCBI RefSeq GCF_000262855.1-RS_2025_02_08 2025-02-08 2972 2762 70 22617140 GCF_000262875.1 PRJNA224116 SAMN02596785 AHBN00000000.1 na 1116217 1280 Staphylococcus aureus subsp. aureus VRS4 strain=VRS4 na latest Contig Major Full 2012-05-15 VRSA04_3 Broad Institute GCA_000262875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/875/GCF_000262875.1_VRSA04_3/ na na na haploid bacteria 2859195 2859195 33.000000 0 72 72 NCBI RefSeq GCF_000262875.1-RS_2025_02_08 2025-02-08 2936 2751 75 22617140 GCF_000262895.1 PRJNA224116 SAMN02596786 AHBO00000000.1 na 1116218 1280 Staphylococcus aureus subsp. aureus VRS5 strain=VRS5 na latest Contig Major Full 2012-05-15 VRSA05_2 Broad Institute GCA_000262895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/895/GCF_000262895.1_VRSA05_2/ na na na haploid bacteria 2919993 2919993 33.000000 0 96 96 NCBI RefSeq GCF_000262895.1-RS_2025_02_08 2025-02-08 3023 2830 63 22617140 GCF_000262915.1 PRJNA224116 SAMN02596787 AHBP00000000.1 na 1116219 1280 Staphylococcus aureus subsp. aureus VRS6 strain=VRS6 na latest Contig Major Full 2012-05-15 VRSA06_2 Broad Institute GCA_000262915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/915/GCF_000262915.1_VRSA06_2/ na na na haploid bacteria 2908442 2908442 33.000000 0 103 103 NCBI RefSeq GCF_000262915.1-RS_2025_09_22 2025-09-22 3018 2799 71 22617140 GCF_000262935.1 PRJNA224116 SAMN02596788 AHBQ00000000.1 na 1116220 1280 Staphylococcus aureus subsp. aureus VRS7 strain=VRS7 na latest Contig Major Full 2012-05-15 VRSA07_3 Broad Institute GCA_000262935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/935/GCF_000262935.1_VRSA07_3/ na na na haploid bacteria 3089104 3089104 33.000000 0 125 125 NCBI RefSeq GCF_000262935.1-RS_2025_02_08 2025-02-08 3237 3031 71 22617140 GCF_000262955.1 PRJNA224116 SAMN02596789 AHBR00000000.1 na 1116221 1280 Staphylococcus aureus subsp. aureus VRS8 strain=VRS8 na latest Contig Major Full 2012-05-15 VRSA08_2 Broad Institute GCA_000262955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/955/GCF_000262955.1_VRSA08_2/ na na na haploid bacteria 2932690 2932690 33.000000 0 79 79 NCBI RefSeq GCF_000262955.1-RS_2025_02_08 2025-02-08 3034 2806 76 22617140 GCF_000262975.1 PRJNA224116 SAMN02596790 AHBS00000000.1 na 1116222 1280 Staphylococcus aureus subsp. aureus VRS9 strain=VRS9 na latest Contig Major Full 2012-05-15 VRSA09_2 Broad Institute GCA_000262975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/975/GCF_000262975.1_VRSA09_2/ na na na haploid bacteria 2914280 2914280 32.500000 0 68 68 NCBI RefSeq GCF_000262975.1-RS_2025_02_08 2025-02-08 2985 2772 75 22617140 GCF_000262995.1 PRJNA224116 SAMN02596791 AHBT00000000.1 na 1116223 1280 Staphylococcus aureus subsp. aureus VRS10 strain=VRS10 na latest Contig Major Full 2012-05-17 VRSA10_2 Broad Institute GCA_000262995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/262/995/GCF_000262995.1_VRSA10_2/ na na na haploid bacteria 3013275 3013275 33.000000 0 65 65 NCBI RefSeq GCF_000262995.1-RS_2025_02_08 2025-02-08 3141 2951 80 22617140 GCF_000263015.1 PRJNA224116 SAMN02596792 AHBU00000000.1 na 1116224 1280 Staphylococcus aureus subsp. aureus VRS11a strain=VRS11a na latest Contig Major Full 2012-05-15 VRSA11a_2 Broad Institute GCA_000263015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/015/GCF_000263015.1_VRSA11a_2/ na na na haploid bacteria 2985100 2985100 33.000000 0 59 59 NCBI RefSeq GCF_000263015.1-RS_2025_02_08 2025-02-08 3065 2877 76 22617140 GCF_000263035.1 PRJNA224116 SAMN02596793 AHBV00000000.1 na 1116225 1280 Staphylococcus aureus subsp. aureus VRS11b strain=VRS11b na latest Contig Major Full 2012-05-15 VRSA11b_2 Broad Institute GCA_000263035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/035/GCF_000263035.1_VRSA11b_2/ na na na haploid bacteria 2986927 2986927 33.000000 0 62 62 NCBI RefSeq GCF_000263035.1-RS_2025_02_07 2025-02-07 3065 2876 78 22617140 GCF_000263055.1 PRJNA224116 SAMN02469768 AJTT00000000.1 reference genome 1175313 37816 Rickettsia honei RB strain=RB na latest Contig Major Full 2012-05-16 Rho1.0 URMITE GCA_000263055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/055/GCF_000263055.1_Rho1.0/ na assembly from type material na haploid bacteria 1268758 1268758 32.500000 0 11 11 NCBI RefSeq GCF_000263055.1-RS_2026_01_08 2026-01-08 1494 1310 40 22815457 GCF_000263075.1 PRJNA224116 SAMN02470171 AJTK00000000.1 na 1175295 1175295 Pseudoalteromonas sp. PAMC 22718 strain=PAMC 22718 na latest Contig Major Full 2012-05-16 PAMC22718V0 Korea Polar Research Institute GCA_000263075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/075/GCF_000263075.1_PAMC22718V0/ na na na haploid bacteria 4184624 4184624 40.000000 0 56 56 NCBI RefSeq GCF_000263075.1-RS_2025_08_27 2025-08-27 3856 3681 89 22815453 GCF_000263095.1 PRJNA224116 SAMN02470950 AJVY00000000.1 na 1177153 573 Klebsiella pneumoniae subsp. pneumoniae LZ strain=LZ na latest Contig Major Full 2012-05-16 Klebphe1.0 Shanghai Jiao Tong University GCA_000263095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/095/GCF_000263095.1_Klebphe1.0/ na na na haploid bacteria 5431750 5431750 57.000000 0 196 196 NCBI RefSeq GCF_000263095.1-RS_2025_01_05 2025-01-05 5412 5156 92 22843590 GCF_000263115.1 PRJNA224116 SAMN02463925 AGXM00000000.1 na 997882 817 Bacteroides fragilis CL07T00C01 strain=CL07T00C01 na latest Scaffold Major Full 2012-09-18 Bact_frag_CL07T00C01_V1 Broad Institute GCA_000263115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/115/GCF_000263115.1_Bact_frag_CL07T00C01_V1/ na na na haploid bacteria 5423654 5414224 43.500000 0 9 24 NCBI RefSeq GCF_000263115.1-RS_2025_12_25 2025-12-25 4542 4347 89 na GCF_000263135.1 PRJNA224116 SAMN02471106 AJSF00000000.1 na 757419 1773 Mycobacterium tuberculosis H37RvCO strain=H37RvCO na latest Chromosome Major Full 2012-06-19 H37RvCO4 Texas A&M University GCA_000263135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/135/GCF_000263135.1_H37RvCO4/ na na na haploid bacteria 4412883 4354567 65.500000 1 1 137 NCBI RefSeq GCF_000263135.1-RS_2025_06_29 2025-06-29 4265 3989 51 20472797 GCF_000263195.1 PRJNA224116 SAMN02232019 na reference genome 929562 312279 Emticicia oligotrophica DSM 17448 strain=DSM 17448 na latest Complete Genome Major Full 2012-05-17 ASM26319v1 DOE Joint Genome Institute GCA_000263195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/195/GCF_000263195.1_ASM26319v1/ na assembly from type material na haploid bacteria 5220361 5220361 35.500000 6 6 6 NCBI RefSeq GCF_000263195.1-RS_2025_09_16 2025-09-16 4339 4278 49 na GCF_000263215.1 PRJNA224116 SAMN02603850 na na 1138308 28141 Cronobacter sakazakii ES15 strain=ES15 na latest Complete Genome Major Full 2012-05-17 ASM26321v1 Seoul National University GCA_000263215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/215/GCF_000263215.1_ASM26321v1/ na na na haploid bacteria 4268675 4268675 57.000000 1 1 1 NCBI RefSeq GCF_000263215.1-RS_2026_03_20 2026-03-20 4032 3869 110 22843579 GCF_000263255.1 PRJNA224116 SAMN02470108 AHKI00000000.1 na 257438 257438 Gluconobacter thailandicus strain=WSH-003 na latest Scaffold Major Full 2012-05-18 GluOxy-1.0 Gluconobacter oxydans WSH-003 GCA_000263255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/255/GCF_000263255.1_GluOxy-1.0/ na na na haploid bacteria 3749027 3715361 56.000000 0 50 179 NCBI RefSeq GCF_000263255.1-RS_2025_12_15 2025-12-15 3546 3350 55 22843589 GCF_000263295.1 PRJNA224116 SAMEA2272617 CAGQ00000000.1 na 1147753 28901 Salmonella enterica subsp. enterica serovar Senftenberg str. SS209 strain=SS209 na latest Contig Major Full 2012-03-09 SE-SS209 Institut National de la Recherche Agronomique (INRA) GCA_000263295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/295/GCF_000263295.1_SE-SS209/ na na na haploid bacteria 5016891 5016891 51.500000 0 109 109 NCBI RefSeq GCF_000263295.1-RS_2025_03_18 2025-03-18 4940 4679 64 na GCF_000263315.1 PRJNA224116 SAMEA2272718 CAHN00000000.1 na 1138874 1314 Streptococcus pyogenes NS88.2 strain=NS88.2 na latest Contig Major Full 2012-03-09 SPNS88.2 University of Wollongong GCA_000263315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/315/GCF_000263315.1_SPNS88.2/ na na na haploid bacteria 1720933 1720933 38.500000 0 298 298 NCBI RefSeq GCF_000263315.1-RS_2026_01_14 2026-01-14 1806 1655 39 na GCF_000263335.2 PRJNA224116 SAMEA2272013 na na 1156940 346 Xanthomonas citri pv. mangiferaeindicae LMG 941 strain=LMG 941 na latest Complete Genome Major Full 2026-05-12 ASM26333v2 Institute of Microbial Technology (CSIR) GCA_000263335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/335/GCF_000263335.2_ASM26333v2/ na na na haploid bacteria 5372108 5372108 64.500000 3 3 3 NCBI RefSeq GCF_000263335.2-RS_2026_05_14 2026-05-14 4631 4243 96 na GCF_000263355.1 PRJNA224116 SAMN02471006 AICM00000000.1 na 1134474 1134474 Cellvibrio sp. BR strain=BR na latest Scaffold Major Full 2012-05-22 ASM26335v1 Animal Science and Technology of southwest University GCA_000263355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/355/GCF_000263355.1_ASM26335v1/ na na na haploid bacteria 4850682 4850031 49.000000 0 23 29 NCBI RefSeq GCF_000263355.1-RS_2024_08_13 2024-08-13 4165 4089 50 na GCF_000263375.1 PRJNA225533 SAMN02769629 AFQX00000000.1 reference genome 671144 1708541 Wallemia mellicola CBS 633.66 strain=CBS 633.66 na latest Scaffold Major Full 2012-05-29 Wallemia sebi v1.0 JGI GCA_000263375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/375/GCF_000263375.1_Wallemia_sebi_v1.0/ na assembly from type material na haploid fungi 9815586 9798416 40.000000 0 56 106 JGI Annotation submitted by JGI 2017-07-12 5395 5277 116 22326418 GCF_000263415.1 PRJNA224116 SAMN02471953 AJVH00000000.1 na 1166015 1717 Corynebacterium diphtheriae bv. intermedius str. NCTC 5011 strain=NCTC 5011 na latest Contig Major Full 2012-05-21 ASM26341v1 Strathclyde Institute of Pharmacy and Biomedical Science, University of Strathclyde GCA_000263415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/415/GCF_000263415.1_ASM26341v1/ na na na haploid bacteria 2380361 2380361 53.500000 0 34 34 NCBI RefSeq GCF_000263415.1-RS_2026_03_20 2026-03-20 2285 2141 53 22887653 GCF_000263435.1 PRJNA224116 SAMN02393773 ADEL00000000.1 na 698950 2702 Gardnerella vaginalis 284V strain=284V na latest Contig Major Full 2012-05-21 ASM26343v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/435/GCF_000263435.1_ASM26343v1/ na na na haploid bacteria 1650838 1650838 41.000000 0 16 16 NCBI RefSeq GCF_000263435.1-RS_2026_02_17 2026-02-17 1306 1240 55 na GCF_000263475.1 PRJNA224116 SAMN02393778 ADEQ00000000.1 na 698955 2702 Gardnerella vaginalis 55152 strain=55152 na latest Contig Major Full 2012-05-21 ASM26347v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/475/GCF_000263475.1_ASM26347v1/ na na na haploid bacteria 1643189 1643189 41.500000 0 25 25 NCBI RefSeq GCF_000263475.1-RS_2025_03_12 2025-03-12 1323 1229 51 na GCF_000263495.1 PRJNA224116 SAMN02393779 ADER00000000.1 na 3383029 3383029 Gardnerella lacydonensis strain=1400E na latest Contig Major Full 2012-05-21 ASM26349v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/495/GCF_000263495.1_ASM26349v1/ na na na haploid bacteria 1716325 1716325 41.000000 0 28 28 NCBI RefSeq GCF_000263495.1-RS_2026_03_12 2026-03-12 1398 1319 51 na GCF_000263515.1 PRJNA224116 SAMN02393782 ADEU00000000.1 na 698959 2914924 Gardnerella pickettii 00703C2mash strain=00703C2mash na latest Contig Major Full 2012-05-21 ASM26351v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/515/GCF_000263515.1_ASM26351v1/ na na na haploid bacteria 1546682 1546682 42.500000 0 22 22 NCBI RefSeq GCF_000263515.1-RS_2025_12_06 2025-12-06 1243 1166 52 na GCF_000263535.1 PRJNA224116 SAMN02393774 ADEM00000000.1 na 698951 2702 Gardnerella vaginalis 75712 strain=75712 na latest Contig Major Full 2012-05-21 ASM26353v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/535/GCF_000263535.1_ASM26353v1/ na na na haploid bacteria 1672968 1672968 41.500000 0 3 3 NCBI RefSeq GCF_000263535.1-RS_2026_01_30 2026-01-30 1324 1253 51 na GCF_000263555.1 PRJNA224116 SAMN02393775 ADEN00000000.1 na 698952 2702 Gardnerella vaginalis 0288E strain=0288E na latest Contig Major Full 2012-05-21 ASM26355v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/555/GCF_000263555.1_ASM26355v1/ na na na haploid bacteria 1708773 1708773 41.000000 0 17 17 NCBI RefSeq GCF_000263555.1-RS_2026_01_30 2026-01-30 1378 1298 51 na GCF_000263595.1 PRJNA224116 SAMN02393780 ADES00000000.1 na 698957 2702 Gardnerella vaginalis 1500E strain=1500E na latest Contig Major Full 2012-05-21 ASM26359v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/595/GCF_000263595.1_ASM26359v1/ na na na haploid bacteria 1548244 1548244 43.000000 0 27 27 NCBI RefSeq GCF_000263595.1-RS_2025_03_12 2025-03-12 1243 1171 51 na GCF_000263615.1 PRJNA224116 SAMN02393781 ADET00000000.1 na 698958 2914924 Gardnerella pickettii 00703Bmash strain=00703Bmash na latest Contig Major Full 2012-05-21 ASM26361v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/615/GCF_000263615.1_ASM26361v1/ na na na haploid bacteria 1566055 1566055 42.500000 0 16 16 NCBI RefSeq GCF_000263615.1-RS_2025_12_04 2025-12-04 1270 1208 51 na GCF_000263635.1 PRJNA224116 SAMN02393783 ADEV00000000.1 na 698960 2914925 Gardnerella greenwoodii 00703Dmash strain=00703Dmash na latest Contig Major Full 2012-05-21 ASM26363v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/635/GCF_000263635.1_ASM26363v1/ na na na haploid bacteria 1490797 1490797 43.500000 0 11 11 NCBI RefSeq GCF_000263635.1-RS_2026_01_30 2026-01-30 1198 1121 51 na GCF_000263655.1 PRJNA224116 SAMN02393784 ADEW00000000.1 na 3383031 3383031 Gardnerella bretellae strain=6119V5 na latest Contig Major Full 2012-05-21 ASM26365v1 Center for Genomic Sciences, Allegheny-Singer Research Institute GCA_000263655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/655/GCF_000263655.1_ASM26365v1/ na na na haploid bacteria 1499602 1499602 43.500000 0 12 12 NCBI RefSeq GCF_000263655.1-RS_2026_03_12 2026-03-12 1195 1122 51 na GCF_000263675.1 PRJNA224116 SAMN02436383 AHPN00000000.1 na 1615674 1615674 Pseudomonas lactis strain=SS101 na latest Chromosome Major Full 2012-06-13 ASM26367v2 USDA - Agricultural Research Service, USA GCA_000263675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/675/GCF_000263675.1_ASM26367v2/ na na na haploid bacteria 6179543 6179443 60.000000 1 1 2 NCBI RefSeq GCF_000263675.1-RS_2026_04_02 2026-04-02 5544 5378 91 22792073 GCF_000263715.2 PRJNA224116 SAMN02436586 AHPP00000000.1 na 96901 47883 Pseudomonas synxantha BG33R strain=BG33R na latest Chromosome Major Full 2012-06-13 ASM26371v2 USDA - Agricultural Research Service, USA GCA_000263715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/715/GCF_000263715.2_ASM26371v2/ na na na haploid bacteria 6297495 6297295 59.500000 1 1 3 NCBI RefSeq GCF_000263715.2-RS_2025_03_18 2025-03-18 5679 5482 91 22792073 GCF_000263735.1 PRJNA224116 SAMN02603491 na na 1183377 1183377 Pyrococcus sp. ST04 strain=ST04 na latest Complete Genome Major Full 2012-05-22 ASM26373v1 Kyung Hee University GCA_000263735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/735/GCF_000263735.1_ASM26373v1/ na na na haploid archaea 1736885 1736885 42.500000 1 1 1 NCBI RefSeq GCF_000263735.1-RS_2024_10_21 2024-10-21 1899 1810 68 22843576 GCF_000263755.5 PRJNA224116 SAMN02603745 na na 1168865 1719 Corynebacterium pseudotuberculosis 258 strain=258 na latest Complete Genome Major Full 2019-12-13 ASM26375v3 Rede Paraense de Genômica e Proteômica GCA_000263755.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/755/GCF_000263755.5_ASM26375v3/ na na na haploid bacteria 2368876 2368876 52.000000 1 1 1 NCBI RefSeq GCF_000263755.5-RS_2026_03_22 2026-03-22 2162 2061 65 23201561 GCF_000263775.1 PRJNA224116 SAMN02471139 AJTH00000000.1 na 1189311 29388 Staphylococcus capitis QN1 strain=QN1 na latest Contig Major Full 2012-05-22 StacapQN11.0 Zhejiang University GCA_000263775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/775/GCF_000263775.1_StacapQN11.0/ na na na haploid bacteria 2430101 2430101 33.000000 0 30 30 NCBI RefSeq GCF_000263775.1-RS_2026_02_17 2026-02-17 2435 2267 71 na GCF_000263795.2 PRJNA224116 SAMN02471431 na na 795665 795665 Hydrogenophaga sp. PBC strain=PBC na latest Complete Genome Major Full 2016-09-28 Hint_PBC Universiti Teknologi Malaysia GCA_000263795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/795/GCF_000263795.2_Hint_PBC/ na na na haploid bacteria 5232477 5232477 68.500000 1 1 1 NCBI RefSeq GCF_000263795.2-RS_2025_08_25 2025-08-25 5088 4978 50 22887664 GCF_000263835.1 PRJNA224116 SAMN02470938 AJVO00000000.1 na 1182783 339 Xanthomonas campestris JX strain=JX na latest Contig Major Full 2012-05-22 Xc1.0 Shanghai Jiao Tong University GCA_000263835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/835/GCF_000263835.1_Xc1.0/ na na na haploid bacteria 5023003 5023003 65.000000 0 155 155 NCBI RefSeq GCF_000263835.1-RS_2026_05_29 2026-05-29 4456 4152 145 22887662 GCF_000263855.1 PRJNA224116 SAMN02471701 AJWX00000000.1 na 1179778 1179778 Pseudomonas sp. M47T1 strain=M47T1 na latest Contig Major Full 2012-05-22 ASM26385v1 University of Coimbra - Faculty of Life Sciences GCA_000263855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/855/GCF_000263855.1_ASM26385v1/ na na na haploid bacteria 6310633 6310633 62.500000 0 88 88 NCBI RefSeq GCF_000263855.1-RS_2025_08_27 2025-08-27 5889 5645 79 22887683 GCF_000263875.1 PRJNA224116 SAMN02472143 AJLQ00000000.1 na 186196 186196 Rhodococcus aromaticivorans strain=DK17 na latest Contig Major Full 2012-05-23 RhoDK17.2 Yonsei University GCA_000263875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/875/GCF_000263875.1_RhoDK17.2/ na na na haploid bacteria 9107362 9107362 67.000000 0 135 135 NCBI RefSeq GCF_000263875.1-RS_2025_08_27 2025-08-27 8627 8178 59 22843580 GCF_000263895.1 PRJNA224116 SAMN00991746 AJVQ00000000.1 na 1165940 562 Escherichia coli O103:H25 str. CVM9340 strain=CVM9340 na latest Contig Major Full 2012-05-23 ASM26389v1 FDA GCA_000263895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/895/GCF_000263895.1_ASM26389v1/ na assembly designated as clade exemplar na haploid bacteria 5260670 5260670 50.500000 0 301 301 NCBI RefSeq GCF_000263895.1-RS_2025_06_09 2025-06-09 5470 5013 97 23052305 GCF_000263915.1 PRJNA224116 SAMN00991747 AJVR00000000.1 na 1165941 562 Escherichia coli O103:H2 str. CVM9450 strain=CVM9450 na latest Contig Major Full 2012-05-23 ASM26391v1 FDA GCA_000263915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/915/GCF_000263915.1_ASM26391v1/ na na na haploid bacteria 5388828 5388828 50.500000 0 322 322 NCBI RefSeq GCF_000263915.1-RS_2025_06_09 2025-06-09 5609 5149 85 23052305 GCF_000263935.1 PRJNA224116 SAMN00991745 AJVS00000000.1 na 1165946 562 Escherichia coli O111:H11 str. CVM9534 strain=CVM9534 na latest Contig Major Full 2012-05-23 ASM26393v1 FDA GCA_000263935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/935/GCF_000263935.1_ASM26393v1/ na na na haploid bacteria 5459491 5459491 50.500000 0 559 559 NCBI RefSeq GCF_000263935.1-RS_2025_06_09 2025-06-09 5917 5277 92 23052305 GCF_000263955.1 PRJNA224116 SAMN00991742 AJVT00000000.1 na 1163391 562 Escherichia coli O111:H11 str. CVM9545 strain=CVM9545 na latest Contig Major Full 2012-05-23 ASM26395v1 US Food and Drug Administration GCA_000263955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/955/GCF_000263955.1_ASM26395v1/ na na na haploid bacteria 5614799 5614799 50.500000 0 790 790 NCBI RefSeq GCF_000263955.1-RS_2026_06_09 2026-06-09 6359 5616 106 23052305 GCF_000263975.1 PRJNA224116 SAMN00991744 AJVU00000000.1 na 1165945 562 Escherichia coli O111:H8 str. CVM9570 strain=CVM9570 na latest Contig Major Full 2012-05-23 ASM26397v1 FDA GCA_000263975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/975/GCF_000263975.1_ASM26397v1/ na na na haploid bacteria 5514200 5514200 50.500000 0 633 633 NCBI RefSeq GCF_000263975.1-RS_2025_04_26 2025-04-26 6077 5319 115 23052305 GCF_000263995.1 PRJNA224116 SAMN00991743 AJVV00000000.1 na 1165943 562 Escherichia coli O111:H8 str. CVM9574 strain=CVM9574 na latest Contig Major Full 2012-05-23 ASM26399v1 FDA GCA_000263995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/995/GCF_000263995.1_ASM26399v1/ na na na haploid bacteria 5360802 5360802 50.500000 0 469 469 NCBI RefSeq GCF_000263995.1-RS_2025_06_09 2025-06-09 5777 5161 106 23052305 GCF_000264015.1 PRJNA224116 SAMN00991748 AJVW00000000.1 na 1165949 562 Escherichia coli O26:H11 str. CVM9942 strain=CVM9942 na latest Contig Major Full 2012-05-23 ASM26401v1 FDA GCA_000264015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/015/GCF_000264015.1_ASM26401v1/ na na na haploid bacteria 5619284 5619284 50.500000 0 568 568 NCBI RefSeq GCF_000264015.1-RS_2025_06_09 2025-06-09 6161 5512 108 23052305 GCF_000264035.1 PRJNA224116 SAMN00991749 AJVX00000000.1 na 1165951 562 Escherichia coli O26:H11 str. CVM10026 strain=CVM10026 na latest Contig Major Full 2012-05-23 ASM26403v1 FDA GCA_000264035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/035/GCF_000264035.1_ASM26403v1/ na na na haploid bacteria 5572799 5572799 50.500000 0 485 485 NCBI RefSeq GCF_000264035.1-RS_2025_06_09 2025-06-09 6019 5386 104 23052305 GCF_000264055.1 PRJNA224116 SAMN02471958 AJXL00000000.1 na 1189620 1189620 Flavobacterium sp. ACAM 123 strain=ACAM 123 na latest Contig Major Full 2012-05-23 Flav123_1.0 University of Tasmania GCA_000264055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/055/GCF_000264055.1_Flav123_1.0/ na na na haploid bacteria 3955605 3955605 35.000000 0 285 285 NCBI RefSeq GCF_000264055.1-RS_2025_01_08 2025-01-08 3559 3368 52 na GCF_000264075.1 PRJNA224116 SAMN02472172 AJVN00000000.1 na 1175299 204042 Dickeya zeae ZJU1202 strain=ZJU1202 na latest Contig Major Full 2012-05-23 ASM26407v1 Institute of Biotechnology GCA_000264075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/075/GCF_000264075.1_ASM26407v1/ na na na haploid bacteria 4587105 4587105 53.500000 0 188 188 NCBI RefSeq GCF_000264075.1-RS_2025_08_12 2025-08-12 4049 3892 89 22843587 GCF_000264095.1 PRJNA224116 SAMN02429040 AJWO00000000.1 na 752783 562 Escherichia coli KD1 strain=KD1 na latest Contig Major Full 2012-05-23 ASM26409v1 Cornell University GCA_000264095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/095/GCF_000264095.1_ASM26409v1/ na na na haploid bacteria 4842831 4842831 50.500000 0 157 157 NCBI RefSeq GCF_000264095.1-RS_2025_06_13 2025-06-13 4779 4492 73 na GCF_000264115.1 PRJNA224116 SAMN02428992 AJWQ00000000.1 na 752785 562 Escherichia coli 541-15 strain=541-15 na latest Contig Major Full 2012-05-23 ASM26411v1 Cornell University GCA_000264115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/115/GCF_000264115.1_ASM26411v1/ na na na haploid bacteria 5033472 5033472 51.000000 0 301 301 NCBI RefSeq GCF_000264115.1-RS_2025_06_13 2025-06-13 5153 4783 79 na GCF_000264135.1 PRJNA224116 SAMN02429042 AJWS00000000.1 na 752787 562 Escherichia coli 576-1 strain=576-1 na latest Contig Major Full 2012-05-23 ASM26413v1 Cornell University GCA_000264135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/135/GCF_000264135.1_ASM26413v1/ na na na haploid bacteria 5191076 5191076 50.500000 0 507 507 NCBI RefSeq GCF_000264135.1-RS_2025_06_13 2025-06-13 5376 4979 77 na GCF_000264155.1 PRJNA224116 SAMN02428993 AJWT00000000.1 na 752788 562 Escherichia coli 75 strain=75 na latest Contig Major Full 2012-05-23 ASM26415v1 Cornell University GCA_000264155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/155/GCF_000264155.1_ASM26415v1/ na na na haploid bacteria 4598368 4598368 50.500000 0 254 254 NCBI RefSeq GCF_000264155.1-RS_2025_06_13 2025-06-13 4571 4216 75 na GCF_000264175.1 PRJNA224116 SAMN02428954 AJWU00000000.1 na 752789 562 Escherichia coli HM605 strain=HM605 na latest Contig Major Full 2012-05-23 ASM26417v1 Cornell University GCA_000264175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/175/GCF_000264175.1_ASM26417v1/ na na na haploid bacteria 5122071 5122071 50.500000 0 289 289 NCBI RefSeq GCF_000264175.1-RS_2025_06_13 2025-06-13 5225 4840 73 na GCF_000264195.1 PRJNA224116 SAMN02429041 AJWP00000000.1 na 752784 562 Escherichia coli KD2 strain=KD2 na latest Contig Major Full 2012-05-23 ASM26419v1 Cornell University GCA_000264195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/195/GCF_000264195.1_ASM26419v1/ na na na haploid bacteria 4965414 4965414 50.500000 0 264 264 NCBI RefSeq GCF_000264195.1-RS_2025_06_13 2025-06-13 4877 4612 71 na GCF_000264215.1 PRJNA224116 SAMN02428958 AJWR00000000.1 na 752786 562 Escherichia coli 541-1 strain=541-1 na latest Contig Major Full 2012-05-23 ASM26421v1 Cornell University GCA_000264215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/215/GCF_000264215.1_ASM26421v1/ na na na haploid bacteria 4999788 4999788 50.500000 0 383 383 NCBI RefSeq GCF_000264215.1-RS_2025_06_13 2025-06-13 5046 4685 73 na GCF_000264235.1 PRJNA224116 SAMN02428994 AJWV00000000.1 na 752790 562 Escherichia coli CUMT8 strain=CUMT8 na latest Contig Major Full 2012-05-23 ASM26423v1 Cornell University GCA_000264235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/235/GCF_000264235.1_ASM26423v1/ na na na haploid bacteria 4713709 4713709 50.500000 0 172 172 NCBI RefSeq GCF_000264235.1-RS_2025_06_13 2025-06-13 4692 4454 78 na GCF_000264255.1 PRJNA224116 SAMN02469599 AJWW00000000.1 na 1177926 1177926 Bacillus sp. M 2-6 strain=KACC 16563 na latest Contig Major Full 2012-05-23 ASM26425v1 Chunlab, Inc. GCA_000264255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/255/GCF_000264255.1_ASM26425v1/ na na na haploid bacteria 3795647 3795647 41.000000 0 67 67 NCBI RefSeq GCF_000264255.1-RS_2025_08_27 2025-08-27 3971 3831 70 23209247 GCF_000264275.1 PRJNA224116 SAMN02469363 AJUV00000000.1 na 1162294 615 Serratia marcescens LCT-SM213 strain=LCT-SM213 na latest Scaffold Major Full 2012-05-29 ASM26427v1 BGI GCA_000264275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/275/GCF_000264275.1_ASM26427v1/ na na na haploid bacteria 5067328 5018857 59.500000 0 11 36 NCBI RefSeq GCF_000264275.1-RS_2026_03_20 2026-03-20 4800 4669 89 22843602 GCF_000264295.1 PRJNA224116 SAMN02469836 AJXT00000000.1 reference genome 1163407 347483 Rhodanobacter spathiphylli B39 strain=B39 na latest Contig Major Full 2012-05-23 Rh17631 NIH GCA_000264295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/295/GCF_000264295.1_Rh17631/ na assembly from type material na haploid bacteria 3910579 3910579 66.500000 0 203 203 NCBI RefSeq GCF_000264295.1-RS_2026_05_05 2026-05-05 3574 3480 56 22843592 GCF_000264315.1 PRJNA224116 SAMN02469837 AJXU00000000.1 reference genome 1163408 219571 Rhodanobacter fulvus Jip2 strain=Jip2 na latest Contig Major Full 2012-05-23 Rh18449 NIH GCA_000264315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/315/GCF_000264315.1_Rh18449/ na assembly from type material na haploid bacteria 3879600 3879600 65.500000 0 130 130 NCBI RefSeq GCF_000264315.1-RS_2026_05_05 2026-05-05 3521 3428 53 22843592 GCF_000264335.1 PRJNA224116 SAMN02469842 AJXS00000000.1 na 1162282 1162282 Rhodanobacter sp. FW021-MT20 strain=115 na latest Contig Major Full 2012-05-23 Rh115 NCBI / NLM / NIH GCA_000264335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/335/GCF_000264335.1_Rh115/ na na na haploid bacteria 4239760 4239760 64.500000 0 485 485 NCBI RefSeq GCF_000264335.1-RS_2024_05_05 2024-05-05 4128 3690 53 22843592 GCF_000264375.1 PRJNA224116 SAMN02469838 AJXW00000000.1 reference genome 1163409 416169 Rhodanobacter thiooxydans LCS2 strain=LCS2 na latest Contig Major Full 2012-05-23 Rh18863 NIH GCA_000264375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/375/GCF_000264375.1_Rh18863/ na assembly from type material na haploid bacteria 4093898 4093898 67.000000 0 210 210 NCBI RefSeq GCF_000264375.1-RS_2026_05_05 2026-05-05 3808 3675 51 22843592 GCF_000264395.1 PRJNA224116 SAMN02470933 AJRJ00000000.1 na 334727 1452 Bacillus atrophaeus C89 strain=C89 na latest Contig Major Full 2012-05-24 C89 version 1 Lab of Marine Biotechnology GCA_000264395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/395/GCF_000264395.1_C89_version_1/ na na na haploid bacteria 4114046 4114046 43.000000 0 91 91 NCBI RefSeq GCF_000264395.1-RS_2026_03_20 2026-03-20 4256 4003 47 22843588 GCF_000264415.1 PRJNA224116 SAMN02470076 AJYB00000000.1 na 1185653 161360 Planococcus antarcticus DSM 14505 strain=DSM 14505 na latest Contig Major Full 2012-05-24 ASM26441v1 IPLA-CSIC GCA_000264415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/415/GCF_000264415.1_ASM26441v1/ na assembly from type material na haploid bacteria 3772109 3772109 43.000000 0 160 160 NCBI RefSeq GCF_000264415.1-RS_2026_02_06 2026-02-06 3817 3635 63 22843594 GCF_000264435.2 PRJNA224116 SAMN02470459 AJWN00000000.2 na 1185651 188144 Enterovibrio norvegicus FF-454 strain=FF-454 na latest Scaffold Major Full 2016-09-16 ASM26443v2 MIT GCA_000264435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/435/GCF_000264435.2_ASM26443v2/ na na na haploid bacteria 5001806 5001716 47.500000 0 112 121 NCBI RefSeq GCF_000264435.2-RS_2025_06_03 2025-06-03 4458 4339 87 22955834 GCF_000264455.2 PRJNA224116 SAMN02603926 na na 1110502 171437 Tistrella mobilis KA081020-065 strain=KA081020-065 na latest Complete Genome Major Full 2012-12-05 ASM26445v2 the Hong Kong University of Science and Technology GCA_000264455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/455/GCF_000264455.2_ASM26445v2/ na na na haploid bacteria 6512983 6512983 68.000000 5 5 5 NCBI RefSeq GCF_000264455.2-RS_2025_02_17 2025-02-17 5923 5773 70 22458477 GCF_000264495.1 PRJNA224116 SAMN02603096 na reference genome 1184251 1200300 Thermogladius calderae 1633 strain=1633 na latest Complete Genome Major Full 2012-05-25 ASM26449v1 Centre Bioengineering RAS GCA_000264495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/495/GCF_000264495.1_ASM26449v1/ na assembly from type material na haploid archaea 1356318 1356318 55.500000 1 1 1 NCBI RefSeq GCF_000264495.1-RS_2026_03_30 2026-03-30 1473 1418 51 22843584;26801582 GCF_000264555.1 PRJNA224116 SAMN02436415 AHOT00000000.1 na 1037915 587753 Pseudomonas chlororaphis O6 strain=O6 na latest Chromosome Major Full 2012-05-31 ASM26455v1 U.S. Department of Agriculture, Agricultural Research Service GCA_000264555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/555/GCF_000264555.1_ASM26455v1/ na na na haploid bacteria 6980251 6977251 63.000000 1 1 31 NCBI RefSeq GCF_000264555.1-RS_2026_02_15 2026-02-15 6393 6223 71 22792073 GCF_000264665.3 PRJNA224116 SAMN02603188 na na 231023 303 Pseudomonas putida ND6 strain=ND6 na latest Complete Genome Major Full 2012-05-29 ASM26466v2 Department of Microbiology of Nankai University GCA_000264665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/665/GCF_000264665.3_ASM26466v2/ na na na haploid bacteria 6304310 6304310 61.500000 3 3 3 NCBI RefSeq GCF_000264665.3-RS_2025_04_26 2025-04-26 5813 5587 99 15246534;22933774 GCF_000264725.1 PRJNA224116 SAMN02471709 AJXD00000000.1 na 1173062 1173062 Acinetobacter sp. HA strain=HA na latest Contig Major Full 2012-05-30 ASM26472v1 University of Delhi GCA_000264725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/725/GCF_000264725.1_ASM26472v1/ na na na haploid bacteria 3125085 3125085 42.500000 0 102 102 NCBI RefSeq GCF_000264725.1-RS_2025_01_31 2025-01-31 3069 2793 86 22933775 GCF_000264745.1 PRJNA224116 SAMN02469789 AJYC00000000.2 na 1129896 37919 Rhodococcus opacus M213 strain=M213 na latest Contig Major Full 2012-11-14 ASM26474v2 University of Illinois at Chicago GCA_000264745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/745/GCF_000264745.1_ASM26474v2/ na na na haploid bacteria 9194165 9194165 67.000000 0 483 483 NCBI RefSeq GCF_000264745.1-RS_2026_06_01 2026-06-01 8864 8376 58 23409266 GCF_000264765.2 PRJNA224116 SAMN02469761 na reference genome 667120 1821960 Edwardsiella anguillarum ET080813 strain=80813 na latest Complete Genome Major Full 2014-08-12 ASM26476v2 State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology GCA_000264765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/765/GCF_000264765.2_ASM26476v2/ na assembly from type material na haploid bacteria 4329652 4329652 58.500000 3 3 3 NCBI RefSeq GCF_000264765.2-RS_2026_04_01 2026-04-01 4046 3806 126 22590641 GCF_000264785.1 PRJNA224116 SAMN02469763 AFJI00000000.1 na 1027360 67780 Edwardsiella ictaluri ATCC 33202 strain=ATCC 33202 na latest Contig Major Full 2012-05-31 ASM26478v1 East China University of Science and Technology, China GCA_000264785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/785/GCF_000264785.1_ASM26478v1/ na assembly from type material na haploid bacteria 3703689 3703689 57.500000 0 117 117 NCBI RefSeq GCF_000264785.1-RS_2026_04_05 2026-04-05 3525 3243 73 22590641 GCF_000264805.1 PRJNA224116 SAMN02469762 AFJG00000000.1 na 667121 636 Edwardsiella tarda ATCC 15947 = NBRC 105688 strain=ATCC 15947 na latest Contig Major Full 2012-05-31 ASM26480v1 State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology GCA_000264805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/805/GCF_000264805.1_ASM26480v1/ na assembly from type material na haploid bacteria 3694689 3694689 57.000000 0 247 247 NCBI RefSeq GCF_000264805.1-RS_2026_04_04 2026-04-04 3466 3337 24 22590641 GCF_000264825.1 PRJNA224116 SAMN02469760 AFJJ00000000.1 na 1027364 636 Edwardsiella tarda DT strain=DT na latest Contig Major Full 2012-05-31 ASM26482v1 East China University of Science and Technology, China GCA_000264825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/825/GCF_000264825.1_ASM26482v1/ na na na haploid bacteria 3759581 3759581 57.000000 0 83 83 NCBI RefSeq GCF_000264825.1-RS_2026_04_03 2026-04-03 3552 3403 78 22590641 GCF_000264905.1 PRJNA225528 SAMN02981277 AEGX00000000.1 reference genome 721885 40492 Stereum hirsutum FP-91666 SS1 strain=FP-91666 SS1 na latest Scaffold Major Full 2012-06-04 Stehi1 JGI GCA_000264905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/905/GCF_000264905.1_Stehi1/ na na na haploid fungi 46511623 45647489 51.500000 0 159 669 JGI Annotation submitted by JGI 2024-01-02 14449 14062 339 22745431 GCF_000264945.2 PRJNA224116 SAMN02471717 na na 861109 332055 Sphingobium indicum B90A strain=B90A na latest Complete Genome Major Full 2016-12-12 ASM26494v2 University of Delhi GCA_000264945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/945/GCF_000264945.2_ASM26494v2/ na assembly from type material na haploid bacteria 3945731 3945731 65.000000 4 4 4 NCBI RefSeq GCF_000264945.2-RS_2025_12_22 2025-12-22 3841 3718 61 22843598 GCF_000264975.1 PRJNA224116 SAMN02469855 AKAP00000000.1 na 1156939 1311 Streptococcus agalactiae ZQ0910 strain=ZQ0910 na latest Scaffold Major Full 2012-06-05 ASM26497v1 Fisheries College, Guangdong Ocean University GCA_000264975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/975/GCF_000264975.1_ASM26497v1/ na na na haploid bacteria 2034915 2008809 35.500000 0 14 54 NCBI RefSeq GCF_000264975.1-RS_2025_12_30 2025-12-30 2028 1913 35 22933761 GCF_000264995.1 PRJNA242546 SAMN00632096 AEGM00000000.1 reference genome 741275 202698 Punctularia strigosozonata HHB-11173 SS5 strain=HHB-11173 SS5 na latest Scaffold Major Full 2012-06-11 Punctularia strigosozonata v1.0 JGI GCA_000264995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/995/GCF_000264995.1_Punctularia_strigosozonata_v1.0/ na na na haploid fungi 34171901 33070052 55.000000 0 195 856 JGI Annotation submitted by JGI 2024-01-02 11644 11537 105 22745431 GCF_000265035.1 PRJNA224116 SAMN02470958 AJXX00000000.1 na 1169413 287 Pseudomonas aeruginosa XMG strain=XMG na latest Contig Major Full 2012-06-04 ASM26503v1 Shanghai Jiao Tong University GCA_000265035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/035/GCF_000265035.1_ASM26503v1/ na na na haploid bacteria 6453808 6453808 66.500000 0 225 225 NCBI RefSeq GCF_000265035.1-RS_2025_04_15 2025-04-15 6149 5985 63 22887660 GCF_000265055.1 PRJNA224116 SAMN02469968 AJXZ00000000.1 na 1189611 204799 Nitratireductor aquibiodomus RA22 strain=RA22 na latest Contig Major Full 2012-06-04 ASM26505v1 Institute of Genomics and Integrative Biology GCA_000265055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/055/GCF_000265055.1_ASM26505v1/ na na na haploid bacteria 4592790 4592790 61.500000 0 95 95 NCBI RefSeq GCF_000265055.1-RS_2026_02_24 2026-02-24 4539 3999 57 23105054 GCF_000265075.1 PRJNA224116 SAMN02469971 AJYA00000000.1 reference genome 1189621 590849 Nitritalea halalkaliphila LW7 strain=LW7 na latest Contig Major Full 2012-06-04 ASM26507v1 Institute of Genomics and Integrative Biology GCA_000265075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/075/GCF_000265075.1_ASM26507v1/ na assembly from type material na haploid bacteria 3633701 3633701 48.500000 0 140 140 NCBI RefSeq GCF_000265075.1-RS_2025_11_21 2025-11-21 3816 3313 49 23012274 GCF_000265095.1 PRJNA224116 SAMN02603486 na na 484020 1681 Bifidobacterium bifidum BGN4 strain=BGN4 na latest Complete Genome Major Full 2012-06-05 ASM26509v1 Korea Research Institute of Bioscience and Biotechnology (KRIBB) GCA_000265095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/095/GCF_000265095.1_ASM26509v1/ na na na haploid bacteria 2223664 2223664 62.500000 1 1 1 NCBI RefSeq GCF_000265095.1-RS_2026_03_28 2026-03-28 1861 1737 64 22887663 GCF_000265205.3 PRJNA224116 SAMN02641503 na na 1185652 380 Sinorhizobium fredii USDA 257 strain=USDA 257 na latest Chromosome Major Full 2012-06-06 ASM26520v2 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000265205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/205/GCF_000265205.3_ASM26520v2/ na na na haploid bacteria 7032323 7032323 62.000000 2 20 20 NCBI RefSeq GCF_000265205.2-RS_2025_09_21 2025-09-21 6717 6297 68 22843606 GCF_000265225.2 PRJNA224116 SAMN02709030 AJWD00000000.2 na 1182263 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) strain=MEAM1 (Bemisia tabaci) na latest Contig Major Full 2016-03-28 ASM26522v2 Zhejiang University, China GCA_000265225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/225/GCF_000265225.2_ASM26522v2/ na na na haploid bacteria 1221534 1221534 32.000000 0 219 219 NCBI RefSeq GCF_000265225.2-RS_2025_01_08 2025-01-08 1290 1146 39 22887655 GCF_000265245.1 PRJNA224116 SAMN02470292 AJKS00000000.2 reference genome 339656 720605 Halomonas smyrnensis AAD6 strain=AAD6 na latest Contig Major Full 2012-07-23 HalSmy2.0 Marmara University GCA_000265245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/245/GCF_000265245.1_HalSmy2.0/ na assembly from type material na haploid bacteria 3561919 3561919 68.000000 0 34 34 NCBI RefSeq GCF_000265245.1-RS_2026_03_21 2026-03-21 3352 3236 69 23012275 GCF_000265295.1 PRJNA224116 SAMN02232056 na reference genome 760154 44674 Sulfurospirillum barnesii SES-3 strain=SES-3 na latest Complete Genome Major Full 2012-06-07 ASM26529v1 DOE Joint Genome Institute GCA_000265295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/295/GCF_000265295.1_ASM26529v1/ na assembly from type material na haploid bacteria 2510109 2510109 39.000000 1 1 1 NCBI RefSeq GCF_000265295.1-RS_2026_04_30 2026-04-30 2564 2500 51 na GCF_000265365.1 PRJNA224116 SAMN02232007 na na 679935 214856 Alistipes finegoldii DSM 17242 strain=DSM 17242 na latest Complete Genome Major Full 2012-06-08 ASM26536v1 DOE Joint Genome Institute GCA_000265365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/365/GCF_000265365.1_ASM26536v1/ na assembly from type material na haploid bacteria 3734239 3734239 56.500000 1 1 1 NCBI RefSeq GCF_000265365.1-RS_2026_04_04 2026-04-04 3241 3119 57 na GCF_000265385.1 PRJNA224116 SAMN02232006 na reference genome 746697 101385 Aequorivita sublithincola DSM 14238 strain=DSM 14238 na latest Complete Genome Major Full 2012-06-08 ASM26538v1 DOE Joint Genome Institute GCA_000265385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/385/GCF_000265385.1_ASM26538v1/ na assembly from type material na haploid bacteria 3520671 3520671 36.000000 1 1 1 NCBI RefSeq GCF_000265385.1-RS_2026_05_01 2026-05-01 3219 3157 48 na GCF_000265405.1 PRJNA224116 SAMN02232009 na reference genome 866536 232259 Belliella baltica DSM 15883 strain=DSM 15883 na latest Complete Genome Major Full 2012-06-08 ASM26540v1 DOE Joint Genome Institute GCA_000265405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/405/GCF_000265405.1_ASM26540v1/ na assembly from type material na haploid bacteria 4196595 4196595 37.000000 1 1 1 NCBI RefSeq GCF_000265405.1-RS_2026_05_01 2026-05-01 3826 3731 54 na GCF_000265425.1 PRJNA224116 SAMN02261411 na reference genome 926566 392734 Terriglobus roseus DSM 18391 strain=DSM 18391 na latest Complete Genome Major Full 2012-06-08 ASM26542v1 JGI GCA_000265425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/425/GCF_000265425.1_ASM26542v1/ na assembly from type material na haploid bacteria 5227858 5227858 60.500000 1 1 1 NCBI RefSeq GCF_000265425.1-RS_2026_05_01 2026-05-01 4339 4249 62 na GCF_000265445.1 PRJNA224116 SAMN02471151 AIPP00000000.1 na 1156938 1406 Paenibacillus polymyxa OSY-DF strain=OSY-DF na latest Contig Major Full 2012-06-08 PaePol1.0 The Ohio State University GCA_000265445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/445/GCF_000265445.1_PaePol1.0/ na na na haploid bacteria 5695430 5695430 45.500000 0 139 139 NCBI RefSeq GCF_000265445.1-RS_2026_03_20 2026-03-20 5132 5028 32 22887654 GCF_000265465.1 PRJNA224116 SAMN02261366 na reference genome 867902 28251 Ornithobacterium rhinotracheale DSM 15997 strain=DSM 15997 na latest Complete Genome Major Full 2012-06-11 ASM26546v1 JGI GCA_000265465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/465/GCF_000265465.1_ASM26546v1/ na assembly from type material na haploid bacteria 2399175 2399175 37.000000 1 1 1 NCBI RefSeq GCF_000265465.1-RS_2025_12_22 2025-12-22 2326 2244 55 na GCF_000265505.1 PRJNA224116 SAMN02261370 na reference genome 880071 999 Bernardetia litoralis DSM 6794 strain=DSM 6794 na latest Complete Genome Major Full 2012-06-11 ASM26550v1 JGI GCA_000265505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/505/GCF_000265505.1_ASM26550v1/ na assembly from type material na haploid bacteria 4919337 4919337 30.500000 1 1 1 NCBI RefSeq GCF_000265505.1-RS_2026_05_01 2026-05-01 4095 4000 61 na GCF_000265525.1 PRJNA224116 SAMN02603492 na reference genome 163003 163003 Thermococcus cleftensis strain=CL1 na latest Complete Genome Major Full 2012-06-11 ASM26552v1 Kyung Hee University GCA_000265525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/525/GCF_000265525.1_ASM26552v1/ na assembly from type material na haploid archaea 1950313 1950313 56.000000 1 1 1 NCBI RefSeq GCF_000265525.1-RS_2025_11_21 2025-11-21 2123 2063 52 22887670 GCF_000265545.3 PRJNA224116 SAMN02603744 na na 1161911 1719 Corynebacterium pseudotuberculosis Cp162 strain=Cp162 na latest Complete Genome Major Full 2019-12-16 ASM26554v3 Rede Paraense de Genômica e Proteômica GCA_000265545.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/545/GCF_000265545.3_ASM26554v3/ na na na haploid bacteria 2382103 2382103 52.000000 1 1 1 NCBI RefSeq GCF_000265545.3-RS_2026_04_16 2026-04-16 2162 2027 63 23012291;31705053 GCF_000265565.1 PRJNA224116 SAMN01090343 AKEM00000000.1 na 1185662 1985254 Xanthomonas phaseoli pv. manihotis str. UA303 strain=UA303 na latest Contig Major Full 2012-06-11 UA303 University of California, Berkeley GCA_000265565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/565/GCF_000265565.1_UA303/ na na na haploid bacteria 4872968 4872968 65.000000 0 130 130 NCBI RefSeq GCF_000265565.1-RS_2026_05_15 2026-05-15 4225 3995 74 22699502 GCF_000265585.1 PRJNA224116 SAMN01090342 AKEL00000000.1 na 1185661 1985254 Xanthomonas phaseoli pv. manihotis str. UA226 strain=UA226 na latest Contig Major Full 2012-06-11 UA226 University of California, Berkeley GCA_000265585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/585/GCF_000265585.1_UA226/ na na na haploid bacteria 4951862 4951862 65.000000 0 129 129 NCBI RefSeq GCF_000265585.1-RS_2026_05_07 2026-05-07 4339 4082 76 22699502 GCF_000265605.1 PRJNA224116 SAMN01090338 AKEH00000000.1 na 1185702 1985254 Xanthomonas phaseoli pv. manihotis str. ORST17 strain=ORST17 na latest Contig Major Full 2012-06-11 ORST17 University of California, Berkeley GCA_000265605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/605/GCF_000265605.1_ORST17/ na na na haploid bacteria 5128104 5128104 65.000000 0 177 177 NCBI RefSeq GCF_000265605.1-RS_2026_05_15 2026-05-15 4551 4295 83 22699502 GCF_000265625.1 PRJNA224116 SAMN01090314 AKDJ00000000.1 na 1185678 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2666 strain=IBSBF 2666 na latest Contig Major Full 2012-06-11 IBSBF2666 University of California, Berkeley GCA_000265625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/625/GCF_000265625.1_IBSBF2666/ na na na haploid bacteria 4842277 4842277 65.000000 0 311 311 NCBI RefSeq GCF_000265625.1-RS_2026_05_15 2026-05-15 4357 3951 76 22699502 GCF_000265645.1 PRJNA224116 SAMN01090313 AKDI00000000.1 na 1185677 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2665 strain=IBSBF 2665 na latest Contig Major Full 2012-06-11 IBSBF2665 University of California, Berkeley GCA_000265645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/645/GCF_000265645.1_IBSBF2665/ na na na haploid bacteria 4836797 4836797 65.000000 0 434 434 NCBI RefSeq GCF_000265645.1-RS_2026_05_15 2026-05-15 4406 4074 77 22699502 GCF_000265665.1 PRJNA224116 SAMN01090330 AKDZ00000000.1 na 1185694 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 321 strain=IBSBF 321 na latest Contig Major Full 2012-06-11 IBSBF321 University of California, Berkeley GCA_000265665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/665/GCF_000265665.1_IBSBF321/ na na na haploid bacteria 4593056 4593056 65.000000 0 888 888 NCBI RefSeq GCF_000265665.1-RS_2025_05_13 2025-05-13 4530 3982 73 22699502 GCF_000265685.1 PRJNA224116 SAMN01090332 AKEB00000000.1 na 1185696 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 436 strain=IBSBF 436 na latest Contig Major Full 2012-06-11 IBSBF436 University of California, Berkeley GCA_000265685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/685/GCF_000265685.1_IBSBF436/ na na na haploid bacteria 4903327 4903327 65.000000 0 149 149 NCBI RefSeq GCF_000265685.1-RS_2026_05_07 2026-05-07 4267 4020 77 22699502 GCF_000265705.1 PRJNA224116 SAMN01090337 AKEG00000000.1 na 1185701 1985254 Xanthomonas phaseoli pv. manihotis str. NG1 strain=NG1 na latest Contig Major Full 2012-06-11 NG1 University of California, Berkeley GCA_000265705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/705/GCF_000265705.1_NG1/ na na na haploid bacteria 4737721 4737721 65.000000 0 785 785 NCBI RefSeq GCF_000265705.1-RS_2025_05_07 2025-05-07 4575 4082 75 22699502 GCF_000265725.1 PRJNA224116 SAMN01090331 AKEA00000000.1 na 1185695 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 356 strain=IBSBF 356 na latest Contig Major Full 2012-06-11 IBSBF356 University of California, Berkeley GCA_000265725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/725/GCF_000265725.1_IBSBF356/ na na na haploid bacteria 4847079 4847079 65.000000 0 130 130 NCBI RefSeq GCF_000265725.1-RS_2026_05_15 2026-05-15 4187 3954 77 22699502 GCF_000265745.1 PRJNA224116 SAMN01090329 AKDY00000000.1 na 1185693 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 320 strain=IBSBF 320 na latest Contig Major Full 2012-06-11 IBSBF320 University of California, Berkeley GCA_000265745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/745/GCF_000265745.1_IBSBF320/ na na na haploid bacteria 4803726 4803726 65.000000 0 121 121 NCBI RefSeq GCF_000265745.1-RS_2026_05_07 2026-05-07 4153 3923 76 22699502 GCF_000265765.1 PRJNA224116 SAMN01090302 AKCX00000000.1 na 1189616 1985254 Xanthomonas phaseoli pv. manihotis str. AT6B strain=AT6B na latest Contig Major Full 2012-06-11 AT6B University of California, Berkeley GCA_000265765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/765/GCF_000265765.1_AT6B/ na na na haploid bacteria 4946093 4946093 65.000000 0 163 163 NCBI RefSeq GCF_000265765.1-RS_2026_05_14 2026-05-14 4324 4080 74 22699502 GCF_000265785.1 PRJNA224116 SAMN01090301 AKCW00000000.1 na 1189618 1985254 Xanthomonas phaseoli pv. manihotis str. AFNC1360 strain=AFNC1360 na latest Contig Major Full 2012-06-11 AFNC1360 University of California, Berkeley GCA_000265785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/785/GCF_000265785.1_AFNC1360/ na na na haploid bacteria 4921075 4921075 65.000000 0 149 149 NCBI RefSeq GCF_000265785.1-RS_2026_05_07 2026-05-07 4301 4070 75 22699502 GCF_000265805.1 PRJNA224116 SAMN01090303 AKCY00000000.1 na 1189617 1985254 Xanthomonas phaseoli pv. manihotis str. CFBP1851 strain=CFBP1851 na latest Contig Major Full 2012-06-11 CFBP1851 University of California, Berkeley GCA_000265805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/805/GCF_000265805.1_CFBP1851/ na na na haploid bacteria 4798436 4798436 65.000000 0 123 123 NCBI RefSeq GCF_000265805.1-RS_2026_05_07 2026-05-07 4156 3914 77 22699502 GCF_000265825.1 PRJNA224116 SAMN01090304 AKCZ00000000.1 na 1185659 1985254 Xanthomonas phaseoli pv. manihotis str. CIO1 strain=CIO1 na latest Contig Major Full 2012-06-11 CIO1 University of California, Berkeley GCA_000265825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/825/GCF_000265825.1_CIO1/ na na na haploid bacteria 4898899 4898899 65.000000 0 128 128 NCBI RefSeq GCF_000265825.1-RS_2026_05_15 2026-05-15 4251 4001 78 22699502 GCF_000265845.1 PRJNA224116 SAMN01090305 AKDA00000000.1 na 1185660 1985254 Xanthomonas phaseoli pv. manihotis str. CIO151 strain=CIO151 na latest Contig Major Full 2012-06-11 CIO151 University of California, Berkeley GCA_000265845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/845/GCF_000265845.1_CIO151/ na na na haploid bacteria 4911246 4911246 65.000000 0 175 175 NCBI RefSeq GCF_000265845.1-RS_2026_05_07 2026-05-07 4307 4040 74 22699502 GCF_000265865.1 PRJNA224116 SAMN01090306 AKDB00000000.1 na 1185670 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 1182 strain=IBSBF 1182 na latest Contig Major Full 2012-06-11 IBSBF1182 University of California, Berkeley GCA_000265865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/865/GCF_000265865.1_IBSBF1182/ na na na haploid bacteria 4773692 4773692 65.000000 0 648 648 NCBI RefSeq GCF_000265865.1-RS_2026_05_15 2026-05-15 4540 4101 75 22699502 GCF_000265885.1 PRJNA224116 SAMN01090307 AKDC00000000.1 na 1185671 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 1411 strain=IBSBF 1411 na latest Contig Major Full 2012-06-11 IBSBF1411 University of California, Berkeley GCA_000265885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/885/GCF_000265885.1_IBSBF1411/ na na na haploid bacteria 4856132 4856132 65.000000 0 130 130 NCBI RefSeq GCF_000265885.1-RS_2026_05_15 2026-05-15 4213 3964 77 22699502 GCF_000265905.1 PRJNA224116 SAMN01090308 AKDD00000000.1 na 1185672 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 1994 strain=IBSBF 1994 na latest Contig Major Full 2012-06-11 IBSBF1994 University of California, Berkeley GCA_000265905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/905/GCF_000265905.1_IBSBF1994/ na na na haploid bacteria 4774518 4774518 65.000000 0 677 677 NCBI RefSeq GCF_000265905.1-RS_2026_05_15 2026-05-15 4522 4103 75 22699502 GCF_000265925.1 PRJNA224116 SAMN01090309 AKDE00000000.1 na 1185673 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2345 strain=IBSBF 2345 na latest Contig Major Full 2012-06-11 IBSBF2345 University of California, Berkeley GCA_000265925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/925/GCF_000265925.1_IBSBF2345/ na na na haploid bacteria 4819772 4819772 65.000000 0 128 128 NCBI RefSeq GCF_000265925.1-RS_2026_05_15 2026-05-15 4160 3943 77 22699502 GCF_000265945.1 PRJNA224116 SAMN01090310 AKDF00000000.1 na 1185674 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2346 strain=IBSBF 2346 na latest Contig Major Full 2012-06-11 IBSBF2346 University of California, Berkeley GCA_000265945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/945/GCF_000265945.1_IBSBF2346/ na na na haploid bacteria 4874593 4874593 65.000000 0 122 122 NCBI RefSeq GCF_000265945.1-RS_2026_05_15 2026-05-15 4221 3989 77 22699502 GCF_000265965.1 PRJNA224116 SAMN01090311 AKDG00000000.1 na 1185675 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2538 strain=IBSBF 2538 na latest Contig Major Full 2012-06-11 IBSBF2538 University of California, Berkeley GCA_000265965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/965/GCF_000265965.1_IBSBF2538/ na na na haploid bacteria 4833429 4833429 65.000000 0 573 573 NCBI RefSeq GCF_000265965.1-RS_2026_05_13 2026-05-13 4526 4140 73 22699502 GCF_000265985.1 PRJNA224116 SAMN01090312 AKDH00000000.1 na 1185676 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2539 strain=IBSBF 2539 na latest Contig Major Full 2012-06-11 IBSBF2539 University of California, Berkeley GCA_000265985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/265/985/GCF_000265985.1_IBSBF2539/ na na na haploid bacteria 4952612 4952612 65.000000 0 138 138 NCBI RefSeq GCF_000265985.1-RS_2026_05_07 2026-05-07 4339 4094 75 22699502 GCF_000266005.1 PRJNA224116 SAMN01090317 AKDM00000000.1 na 1185681 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2672 strain=IBSBF 2672 na latest Contig Major Full 2012-06-11 IBSBF2672 University of California, Berkeley GCA_000266005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/005/GCF_000266005.1_IBSBF2672/ na na na haploid bacteria 4856510 4856510 65.000000 0 131 131 NCBI RefSeq GCF_000266005.1-RS_2026_05_07 2026-05-07 4212 3968 76 22699502 GCF_000266025.1 PRJNA224116 SAMN01090318 AKDN00000000.1 na 1185682 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2673 strain=IBSBF 2673 na latest Contig Major Full 2012-06-11 IBSBF2673 University of California, Berkeley GCA_000266025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/025/GCF_000266025.1_IBSBF2673/ na na na haploid bacteria 4830620 4830620 65.000000 0 305 305 NCBI RefSeq GCF_000266025.1-RS_2026_05_07 2026-05-07 4324 4010 77 22699502 GCF_000266045.1 PRJNA224116 SAMN01090319 AKDO00000000.1 na 1185683 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 278 strain=IBSBF 278 na latest Contig Major Full 2012-06-11 IBSBF278 University of California, Berkeley GCA_000266045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/045/GCF_000266045.1_IBSBF278/ na na na haploid bacteria 5020210 5020210 65.000000 0 138 138 NCBI RefSeq GCF_000266045.1-RS_2026_05_07 2026-05-07 4390 4138 76 22699502 GCF_000266065.1 PRJNA224116 SAMN01090320 AKDP00000000.1 na 1185684 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 280 strain=IBSBF 280 na latest Contig Major Full 2012-06-11 IBSBF280 University of California, Berkeley GCA_000266065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/065/GCF_000266065.1_IBSBF280/ na na na haploid bacteria 4842752 4842752 65.000000 0 850 850 NCBI RefSeq GCF_000266065.1-RS_2026_05_15 2026-05-15 4740 4205 75 22699502 GCF_000266085.1 PRJNA224116 SAMN01090321 AKDQ00000000.1 na 1185685 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2816 strain=IBSBF 2816 na latest Contig Major Full 2012-06-11 IBSBF2816 University of California, Berkeley GCA_000266085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/085/GCF_000266085.1_IBSBF2816/ na na na haploid bacteria 4902619 4902619 65.000000 0 145 145 NCBI RefSeq GCF_000266085.1-RS_2026_05_07 2026-05-07 4274 4039 77 22699502 GCF_000266105.2 PRJNA224116 SAMN01090322 AKDR00000000.2 na 1185686 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2818 strain=IBSBF 2818 na latest Contig Major Full 2020-01-09 ASM26610v2 University of California, Berkeley GCA_000266105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/105/GCF_000266105.2_ASM26610v2/ na na na haploid bacteria 5015437 5015437 65.000000 0 146 146 NCBI RefSeq GCF_000266105.2-RS_2026_05_07 2026-05-07 4400 4119 76 22699502 GCF_000266125.1 PRJNA224116 SAMN01090323 AKDS00000000.1 na 1185687 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2819 strain=IBSBF 2819 na latest Contig Major Full 2012-06-11 IBSBF2819 University of California, Berkeley GCA_000266125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/125/GCF_000266125.1_IBSBF2819/ na na na haploid bacteria 4852810 4852810 65.000000 0 557 557 NCBI RefSeq GCF_000266125.1-RS_2026_05_15 2026-05-15 4522 4145 77 22699502 GCF_000266145.1 PRJNA224116 SAMN01090324 AKDT00000000.1 na 1185688 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2820 strain=IBSBF 2820 na latest Contig Major Full 2012-06-11 IBSBF2820 University of California, Berkeley GCA_000266145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/145/GCF_000266145.1_IBSBF2820/ na na na haploid bacteria 4930429 4930429 65.000000 0 150 150 NCBI RefSeq GCF_000266145.1-RS_2026_05_07 2026-05-07 4313 4072 76 22699502 GCF_000266165.1 PRJNA224116 SAMN01090325 AKDU00000000.1 na 1185689 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2821 strain=IBSBF 2821 na latest Contig Major Full 2012-06-11 IBSBF2821 University of California, Berkeley GCA_000266165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/165/GCF_000266165.1_IBSBF2821/ na na na haploid bacteria 4906958 4906958 65.000000 0 161 161 NCBI RefSeq GCF_000266165.1-RS_2026_05_13 2026-05-13 4294 4055 77 22699502 GCF_000266185.1 PRJNA224116 SAMN01090326 AKDV00000000.1 na 1185690 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2822 strain=IBSBF 2822 na latest Contig Major Full 2012-06-11 IBSBF2822 University of California, Berkeley GCA_000266185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/185/GCF_000266185.1_IBSBF2822/ na na na haploid bacteria 4831349 4831349 65.000000 0 464 464 NCBI RefSeq GCF_000266185.1-RS_2026_05_15 2026-05-15 4429 4059 79 22699502 GCF_000266205.1 PRJNA224116 SAMN01090327 AKDW00000000.1 na 1185691 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 285 strain=IBSBF 285 na latest Contig Major Full 2012-06-11 IBSBF285 University of California, Berkeley GCA_000266205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/205/GCF_000266205.1_IBSBF285/ na na na haploid bacteria 4972047 4972047 65.000000 0 147 147 NCBI RefSeq GCF_000266205.1-RS_2026_05_07 2026-05-07 4383 4114 77 22699502 GCF_000266225.1 PRJNA224116 SAMN01090328 AKDX00000000.1 na 1185692 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 289 strain=IBSBF 289 na latest Contig Major Full 2012-06-11 IBSBF289 University of California, Berkeley GCA_000266225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/225/GCF_000266225.1_IBSBF289/ na na na haploid bacteria 4847529 4847529 65.000000 0 155 155 NCBI RefSeq GCF_000266225.1-RS_2026_05_15 2026-05-15 4217 3966 77 22699502 GCF_000266245.1 PRJNA224116 SAMN01090334 AKED00000000.1 na 1185698 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 725 strain=IBSBF 725 na latest Contig Major Full 2012-06-11 IBSBF725 University of California, Berkeley GCA_000266245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/245/GCF_000266245.1_IBSBF725/ na na na haploid bacteria 4886517 4886517 65.000000 0 141 141 NCBI RefSeq GCF_000266245.1-RS_2026_05_07 2026-05-07 4241 3999 76 22699502 GCF_000266265.1 PRJNA224116 SAMN01090335 AKEE00000000.1 na 1185699 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 726 strain=IBSBF 726 na latest Contig Major Full 2012-06-11 IBSBF726 University of California, Berkeley GCA_000266265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/265/GCF_000266265.1_IBSBF726/ na na na haploid bacteria 4832905 4832905 65.000000 0 140 140 NCBI RefSeq GCF_000266265.1-RS_2026_05_15 2026-05-15 4193 3951 76 22699502 GCF_000266285.1 PRJNA224116 SAMN01090336 AKEF00000000.1 na 1185700 1985254 Xanthomonas phaseoli pv. manihotis str. NCPPB 1159 strain=NCPPB 1159 na latest Contig Major Full 2012-06-11 NCPPB1159 University of California, Berkeley GCA_000266285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/285/GCF_000266285.1_NCPPB1159/ na na na haploid bacteria 4797980 4797980 65.000000 0 128 128 NCBI RefSeq GCF_000266285.1-RS_2026_05_15 2026-05-15 4148 3898 77 22699502 GCF_000266305.1 PRJNA224116 SAMN01090339 AKEI00000000.1 na 1185703 1985254 Xanthomonas phaseoli pv. manihotis str. ORST4 strain=ORST4 na latest Contig Major Full 2012-06-11 ORST4 University of California, Berkeley GCA_000266305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/305/GCF_000266305.1_ORST4/ na na na haploid bacteria 4650210 4650210 65.000000 0 767 767 NCBI RefSeq GCF_000266305.1-RS_2025_05_07 2025-05-07 4501 3996 74 22699502 GCF_000266325.1 PRJNA224116 SAMN01090340 AKEJ00000000.1 na 1185704 1985254 Xanthomonas phaseoli pv. manihotis str. ORST X27 strain=ORST X27 na latest Contig Major Full 2012-06-11 ORSTX27 University of California, Berkeley GCA_000266325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/325/GCF_000266325.1_ORSTX27/ na na na haploid bacteria 4931909 4931909 65.000000 0 133 133 NCBI RefSeq GCF_000266325.1-RS_2026_05_05 2026-05-05 4299 4077 75 22699502 GCF_000266345.1 PRJNA224116 SAMN01090341 AKEK00000000.1 na 1185705 1985254 Xanthomonas phaseoli pv. manihotis str. ThaiXam strain=ThaiXam na latest Contig Major Full 2012-06-11 ThaiXam University of California, Berkeley GCA_000266345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/345/GCF_000266345.1_ThaiXam/ na na na haploid bacteria 4874623 4874623 65.000000 0 324 324 NCBI RefSeq GCF_000266345.1-RS_2026_05_07 2026-05-07 4371 4083 74 22699502 GCF_000266365.1 PRJNA224116 SAMN01090347 AKEQ00000000.1 na 1185666 1985254 Xanthomonas phaseoli pv. manihotis str. UA536 strain=UA536 na latest Contig Major Full 2012-06-11 UA536 University of California, Berkeley GCA_000266365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/365/GCF_000266365.1_UA536/ na na na haploid bacteria 4866301 4866301 65.000000 0 142 142 NCBI RefSeq GCF_000266365.1-RS_2026_05_15 2026-05-15 4224 3996 74 22699502 GCF_000266385.1 PRJNA224116 SAMN01090348 AKER00000000.1 na 1185667 1985254 Xanthomonas phaseoli pv. manihotis str. UA556 strain=UA556 na latest Contig Major Full 2012-06-11 UA556 University of California, Berkeley GCA_000266385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/385/GCF_000266385.1_UA556/ na na na haploid bacteria 4842655 4842655 65.000000 0 139 139 NCBI RefSeq GCF_000266385.1-RS_2026_05_15 2026-05-15 4215 3964 75 22699502 GCF_000266405.1 PRJNA224116 SAMN01090349 AKES00000000.1 na 1185668 1985254 Xanthomonas phaseoli pv. manihotis str. UA560 strain=UA560 na latest Contig Major Full 2012-06-11 UA560 University of California, Berkeley GCA_000266405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/405/GCF_000266405.1_UA560/ na na na haploid bacteria 4897922 4897922 65.000000 0 154 154 NCBI RefSeq GCF_000266405.1-RS_2026_05_15 2026-05-15 4252 4015 74 22699502 GCF_000266425.1 PRJNA224116 SAMN01090350 AKET00000000.1 na 1185669 1985254 Xanthomonas phaseoli pv. manihotis str. UA686 strain=UA686 na latest Contig Major Full 2012-06-11 UA686 University of California, Berkeley GCA_000266425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/425/GCF_000266425.1_UA686/ na na na haploid bacteria 4898003 4898003 65.000000 0 143 143 NCBI RefSeq GCF_000266425.1-RS_2026_05_07 2026-05-07 4257 4026 74 22699502 GCF_000266445.1 PRJNA224116 SAMN01090351 AKEU00000000.1 na 1185706 1985254 Xanthomonas phaseoli pv. manihotis str. UG21 strain=UG21 na latest Contig Major Full 2012-06-11 UG21 University of California, Berkeley GCA_000266445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/445/GCF_000266445.1_UG21/ na na na haploid bacteria 5010468 5010468 65.000000 0 148 148 NCBI RefSeq GCF_000266445.1-RS_2026_05_07 2026-05-07 4408 4175 74 22699502 GCF_000266465.1 PRJNA224116 SAMN01090352 AKEV00000000.1 na 1185707 1985254 Xanthomonas phaseoli pv. manihotis str. UG23 strain=UG23 na latest Contig Major Full 2012-06-11 UG23 University of California, Berkeley GCA_000266465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/465/GCF_000266465.1_UG23/ na na na haploid bacteria 4924062 4924062 65.000000 0 133 133 NCBI RefSeq GCF_000266465.1-RS_2026_05_14 2026-05-14 4302 4054 75 22699502 GCF_000266485.1 PRJNA224116 SAMN01090353 AKEW00000000.1 na 1185708 1985254 Xanthomonas phaseoli pv. manihotis str. UG24 strain=UG24 na latest Contig Major Full 2012-06-11 UG24 University of California, Berkeley GCA_000266485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/485/GCF_000266485.1_UG24/ na na na haploid bacteria 4909909 4909909 65.000000 0 145 145 NCBI RefSeq GCF_000266485.1-RS_2026_05_14 2026-05-14 4276 4030 76 22699502 GCF_000266505.1 PRJNA224116 SAMN01090354 AKEX00000000.1 na 1185709 1985254 Xanthomonas phaseoli pv. manihotis str. UG27 strain=UG27 na latest Contig Major Full 2012-06-11 UG27 University of California, Berkeley GCA_000266505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/505/GCF_000266505.1_UG27/ na na na haploid bacteria 4903342 4903342 65.000000 0 131 131 NCBI RefSeq GCF_000266505.1-RS_2026_05_07 2026-05-07 4254 4015 76 22699502 GCF_000266525.1 PRJNA224116 SAMN01090355 AKEY00000000.1 na 1185710 1985254 Xanthomonas phaseoli pv. manihotis str. UG28 strain=UG28 na latest Contig Major Full 2012-06-11 UG28 University of California, Berkeley GCA_000266525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/525/GCF_000266525.1_UG28/ na na na haploid bacteria 4722734 4722734 65.000000 0 676 676 NCBI RefSeq GCF_000266525.1-RS_2026_05_07 2026-05-07 4493 4094 74 22699502 GCF_000266545.1 PRJNA224116 SAMN01090356 AKEZ00000000.1 na 1185711 1985254 Xanthomonas phaseoli pv. manihotis str. UG39 strain=UG39 na latest Contig Major Full 2012-06-11 UG39 University of California, Berkeley GCA_000266545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/545/GCF_000266545.1_UG39/ na na na haploid bacteria 4911502 4911502 65.000000 0 130 130 NCBI RefSeq GCF_000266545.1-RS_2026_05_07 2026-05-07 4275 4040 75 22699502 GCF_000266565.1 PRJNA224116 SAMN01090357 AKFA00000000.1 na 1185712 1985254 Xanthomonas phaseoli pv. manihotis str. UG43 strain=UG43 na latest Contig Major Full 2012-06-11 UG43 University of California, Berkeley GCA_000266565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/565/GCF_000266565.1_UG43/ na na na haploid bacteria 4924182 4924182 65.000000 0 145 145 NCBI RefSeq GCF_000266565.1-RS_2026_05_14 2026-05-14 4296 4053 75 22699502 GCF_000266585.1 PRJNA224116 SAMN01090358 AKFB00000000.1 na 1185713 1985254 Xanthomonas phaseoli pv. manihotis str. UG44 strain=UG44 na latest Contig Major Full 2012-06-11 UG44 University of California, Berkeley GCA_000266585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/585/GCF_000266585.1_UG44/ na na na haploid bacteria 4895442 4895442 65.000000 0 141 141 NCBI RefSeq GCF_000266585.1-RS_2026_05_14 2026-05-14 4271 4029 75 22699502 GCF_000266605.1 PRJNA224116 SAMN01090359 AKFC00000000.1 na 1185714 1985254 Xanthomonas phaseoli pv. manihotis str. UG45 strain=UG45 na latest Contig Major Full 2012-06-11 UG45 University of California, Berkeley GCA_000266605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/605/GCF_000266605.1_UG45/ na na na haploid bacteria 4986397 4986397 65.000000 0 323 323 NCBI RefSeq GCF_000266605.1-RS_2026_05_15 2026-05-15 4464 4177 77 22699502 GCF_000266625.1 PRJNA224116 SAMN01090360 AKFD00000000.1 na 1185715 1985254 Xanthomonas phaseoli pv. manihotis str. UG51 strain=UG51 na latest Contig Major Full 2012-06-11 UG51 University of California, Berkeley GCA_000266625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/625/GCF_000266625.1_UG51/ na na na haploid bacteria 4871289 4871289 65.000000 0 140 140 NCBI RefSeq GCF_000266625.1-RS_2026_05_15 2026-05-15 4240 4024 75 22699502 GCF_000266645.1 PRJNA224116 SAMN01090300 AKFE00000000.1 na 1185658 1985254 Xanthomonas phaseoli pv. manihotis str. Xam1134 strain=Xam1134 na latest Contig Major Full 2012-06-11 Xam1134 University of California, Berkeley GCA_000266645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/645/GCF_000266645.1_Xam1134/ na na na haploid bacteria 4894844 4894844 65.000000 0 158 158 NCBI RefSeq GCF_000266645.1-RS_2026_05_05 2026-05-05 4274 4055 75 22699502 GCF_000266665.1 PRJNA224116 SAMN01090296 AKFF00000000.1 na 1185327 1985254 Xanthomonas phaseoli pv. manihotis str. Xam668 strain=Xam668 na latest Contig Major Full 2012-06-11 Xam668 University of California, Berkeley GCA_000266665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/665/GCF_000266665.1_Xam668/ na na na haploid bacteria 4954860 4954860 65.000000 0 195 195 NCBI RefSeq GCF_000266665.1-RS_2026_05_07 2026-05-07 4376 4105 75 22699502 GCF_000266685.1 PRJNA224116 SAMN01090297 AKFG00000000.1 na 1185655 1985254 Xanthomonas phaseoli pv. manihotis str. Xam669 strain=Xam669 na latest Contig Major Full 2012-06-11 Xam669 University of California, Berkeley GCA_000266685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/685/GCF_000266685.1_Xam669/ na na na haploid bacteria 4820297 4820297 65.000000 0 137 137 NCBI RefSeq GCF_000266685.1-RS_2026_05_15 2026-05-15 4181 3957 75 22699502 GCF_000266705.1 PRJNA224116 SAMN01090298 AKFH00000000.1 na 1185656 1985254 Xanthomonas phaseoli pv. manihotis str. Xam672 strain=Xam672 na latest Contig Major Full 2012-06-11 Xam672 University of California, Berkeley GCA_000266705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/705/GCF_000266705.1_Xam672/ na na na haploid bacteria 5016075 5016075 65.000000 0 165 165 NCBI RefSeq GCF_000266705.1-RS_2026_05_07 2026-05-07 4396 4157 76 22699502 GCF_000266725.1 PRJNA224116 SAMN01090299 AKFI00000000.1 na 1185657 1985254 Xanthomonas phaseoli pv. manihotis str. Xam678 strain=Xam678 na latest Contig Major Full 2012-06-11 Xam678 University of California, Berkeley GCA_000266725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/725/GCF_000266725.1_Xam678/ na na na haploid bacteria 4894142 4894142 65.000000 0 256 256 NCBI RefSeq GCF_000266725.1-RS_2026_05_07 2026-05-07 4347 4080 75 22699502 GCF_000266745.1 PRJNA224116 SAMN01090315 AKDK00000000.1 na 1185679 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2667 strain=IBSBF 2667 na latest Contig Major Full 2012-06-11 IBSBF2667 University of California, Berkeley GCA_000266745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/745/GCF_000266745.1_IBSBF2667/ na na na haploid bacteria 4913060 4913060 65.000000 0 138 138 NCBI RefSeq GCF_000266745.1-RS_2026_05_07 2026-05-07 4279 4028 77 22699502 GCF_000266765.1 PRJNA224116 SAMN01090316 AKDL00000000.1 na 1185680 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 2670 strain=IBSBF 2670 na latest Contig Major Full 2012-06-11 IBSBF2670 University of California, Berkeley GCA_000266765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/765/GCF_000266765.1_IBSBF2670/ na na na haploid bacteria 4902902 4902902 65.000000 0 139 139 NCBI RefSeq GCF_000266765.1-RS_2026_05_07 2026-05-07 4281 4045 77 22699502 GCF_000266785.1 PRJNA224116 SAMN01090333 AKEC00000000.1 na 1185697 1985254 Xanthomonas phaseoli pv. manihotis str. IBSBF 614 strain=IBSBF 614 na latest Contig Major Full 2012-06-11 IBSBF614 University of California, Berkeley GCA_000266785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/785/GCF_000266785.1_IBSBF614/ na na na haploid bacteria 4730788 4730788 65.000000 0 706 706 NCBI RefSeq GCF_000266785.1-RS_2025_05_12 2025-05-12 4503 4018 76 22699502 GCF_000266805.1 PRJNA224116 SAMN01090345 AKEO00000000.1 na 1185664 1985254 Xanthomonas phaseoli pv. manihotis str. UA323 strain=UA323 na latest Contig Major Full 2012-06-11 UA323 University of California, Berkeley GCA_000266805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/805/GCF_000266805.1_UA323/ na na na haploid bacteria 4872007 4872007 65.000000 0 151 151 NCBI RefSeq GCF_000266805.1-RS_2026_05_15 2026-05-15 4221 3973 75 22699502 GCF_000266825.1 PRJNA224116 SAMN01090344 AKEN00000000.1 na 1185663 1985254 Xanthomonas phaseoli pv. manihotis str. UA306 strain=UA306 na latest Contig Major Full 2012-06-11 UA306 University of California, Berkeley GCA_000266825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/825/GCF_000266825.1_UA306/ na na na haploid bacteria 5065231 5065231 65.000000 0 144 144 NCBI RefSeq GCF_000266825.1-RS_2026_05_07 2026-05-07 4464 4242 75 22699502 GCF_000266845.1 PRJNA224116 SAMN01090346 AKEP00000000.1 na 1185665 1985254 Xanthomonas phaseoli pv. manihotis str. UA324 strain=UA324 na latest Contig Major Full 2012-06-11 UA324 University of California, Berkeley GCA_000266845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/845/GCF_000266845.1_UA324/ na na na haploid bacteria 4916013 4916013 65.000000 0 146 146 NCBI RefSeq GCF_000266845.1-RS_2026_05_07 2026-05-07 4272 4031 75 22699502 GCF_000266865.1 PRJNA224116 SAMN02471344 AJPR00000000.1 na 1110504 2110 Mycoplasmopsis agalactiae 14628 strain=14628 na latest Contig Major Full 2012-06-11 ASM26686v1 EVOLMYCO GCA_000266865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/865/GCF_000266865.1_ASM26686v1/ na na na haploid bacteria 919593 919593 30.000000 0 22 22 NCBI RefSeq GCF_000266865.1-RS_2025_03_21 2025-03-21 836 770 43 22522685 GCF_000266885.1 PRJNA224116 SAMN02232065 na reference genome 869212 29510 Turneriella parva DSM 21527 strain=DSM 21527 na latest Complete Genome Major Full 2012-06-12 ASM26688v1 DOE Joint Genome Institute GCA_000266885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/885/GCF_000266885.1_ASM26688v1/ na assembly from type material na haploid bacteria 4409302 4409302 53.500000 2 2 2 NCBI RefSeq GCF_000266885.1-RS_2026_05_01 2026-05-01 4204 4113 47 na GCF_000266905.1 PRJNA224116 SAMN02261374 na na 710421 1800 Mycolicibacterium chubuense NBB4 strain=NBB4 na latest Complete Genome Major Full 2012-06-12 ASM26690v1 JGI GCA_000266905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/905/GCF_000266905.1_ASM26690v1/ na na na haploid bacteria 6342624 6342624 68.500000 3 3 3 NCBI RefSeq GCF_000266905.1-RS_2025_05_20 2025-05-20 6047 5864 55 na GCF_000266945.1 PRJNA224116 SAMN02232013 na reference genome 706587 2358 Desulfomonile tiedjei DSM 6799 strain=DSM 6799 na latest Complete Genome Major Full 2012-06-12 ASM26694v1 DOE Joint Genome Institute GCA_000266945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/945/GCF_000266945.1_ASM26694v1/ na assembly from type material na haploid bacteria 6527027 6527027 50.000000 2 2 2 NCBI RefSeq GCF_000266945.1-RS_2026_07_03 2026-07-03 5398 5304 54 na GCF_000266985.1 PRJNA224116 SAMN02470032 AJXB00000000.1 na 441157 430531 Burkholderia humptydooensis MSMB43 strain=MSMB43 na latest Scaffold Major Full 2012-06-12 ASM26698v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000266985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/266/985/GCF_000266985.1_ASM26698v1/ na assembly from type material na haploid bacteria 7245989 7209234 67.000000 0 61 176 NCBI RefSeq GCF_000266985.1-RS_2025_09_13 2025-09-13 6690 6262 68 22887659 GCF_000267005.2 PRJNA224116 SAMN02435932 AKKW00000000.1 na 1005471 562 Escherichia coli FDA505 strain=FDA505 na latest Scaffold Minor Full 2012-06-15 ASM26700v2 Institute for Genome Sciences GCA_000267005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/005/GCF_000267005.2_ASM26700v2/ na na na haploid bacteria 5349086 5347073 50.500000 0 486 539 NCBI RefSeq GCF_000267005.2-RS_2025_06_16 2025-06-16 5685 5116 102 23516226 GCF_000267025.1 PRJNA224116 SAMN02435976 AKMN00000000.1 na 1005535 562 Escherichia coli EC1738 strain=EC1738 na latest Contig Major Full 2012-06-12 ASM26702v1 Institute for Genome Sciences GCA_000267025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/025/GCF_000267025.1_ASM26702v1/ na na na haploid bacteria 5478162 5478162 50.500000 0 62 62 NCBI RefSeq GCF_000267025.1-RS_2025_05_16 2025-05-16 5498 4956 148 23516226 GCF_000267045.1 PRJNA224116 SAMN02435977 AKMO00000000.1 na 1005536 562 Escherichia coli EC1734 strain=EC1734 na latest Contig Major Full 2012-06-12 ASM26704v1 Institute for Genome Sciences GCA_000267045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/045/GCF_000267045.1_ASM26704v1/ na na na haploid bacteria 5427907 5427907 50.500000 0 54 54 NCBI RefSeq GCF_000267045.1-RS_2025_05_23 2025-05-23 5476 4997 132 23516226 GCF_000267065.1 PRJNA224116 SAMN02435927 AKLY00000000.1 na 1005520 562 Escherichia coli TW09109 strain=TW09109 na latest Contig Major Full 2012-06-12 ASM26706v1 Institute for Genome Sciences GCA_000267065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/065/GCF_000267065.1_ASM26706v1/ na na na haploid bacteria 5578209 5578209 50.500000 0 66 66 NCBI RefSeq GCF_000267065.1-RS_2025_05_23 2025-05-23 5659 5110 146 23516226 GCF_000267085.1 PRJNA224116 SAMN02435925 AKLI00000000.1 na 1005497 562 Escherichia coli PA22 strain=PA22 na latest Contig Major Full 2012-06-12 ASM26708v1 Institute for Genome Sciences GCA_000267085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/085/GCF_000267085.1_ASM26708v1/ na na na haploid bacteria 5494508 5494508 50.500000 0 75 75 NCBI RefSeq GCF_000267085.1-RS_2025_06_14 2025-06-14 5551 5006 133 na GCF_000267105.1 PRJNA224116 SAMN00760005 AKLQ00000000.1 na 1005508 562 Escherichia coli PA40 strain=PA40 na latest Contig Major Full 2012-06-12 ASM26710v1 Institute for Genome Sciences GCA_000267105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/105/GCF_000267105.1_ASM26710v1/ na na na haploid bacteria 5525229 5525229 50.000000 0 66 66 NCBI RefSeq GCF_000267105.1-RS_2025_07_08 2025-07-08 5653 5142 133 na GCF_000267125.1 PRJNA224116 SAMN02435920 AKLT00000000.1 na 1005515 562 Escherichia coli TW06591 strain=TW06591 na latest Contig Major Full 2012-06-12 ASM26712v1 Institute for Genome Sciences GCA_000267125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/125/GCF_000267125.1_ASM26712v1/ na na na haploid bacteria 5475455 5475455 50.500000 0 45 45 NCBI RefSeq GCF_000267125.1-RS_2025_06_14 2025-06-14 5527 5075 143 na GCF_000267145.1 PRJNA224116 SAMN02435921 AKLV00000000.1 na 1005517 562 Escherichia coli TW10246 strain=TW10246 na latest Contig Major Full 2012-06-12 ASM26714v1 Institute for Genome Sciences GCA_000267145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/145/GCF_000267145.1_ASM26714v1/ na na na haploid bacteria 5446604 5446604 50.500000 0 47 47 NCBI RefSeq GCF_000267145.1-RS_2025_05_16 2025-05-16 5464 4964 151 23516226 GCF_000267165.1 PRJNA224116 SAMN02435981 AKLW00000000.1 na 1005518 562 Escherichia coli TW11039 strain=TW11039 na latest Contig Major Full 2012-06-12 ASM26716v1 Institute for Genome Sciences GCA_000267165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/165/GCF_000267165.1_ASM26716v1/ na na na haploid bacteria 5596176 5596176 50.500000 0 71 71 NCBI RefSeq GCF_000267165.1-RS_2025_05_23 2025-05-23 5727 5177 155 23516226 GCF_000267185.1 PRJNA224116 SAMN02435953 AKMA00000000.1 na 1005522 562 Escherichia coli TW10119 strain=TW10119 na latest Contig Major Full 2012-06-12 ASM26718v1 Institute for Genome Sciences GCA_000267185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/185/GCF_000267185.1_ASM26718v1/ na na na haploid bacteria 5551996 5551996 50.500000 0 56 56 NCBI RefSeq GCF_000267185.1-RS_2025_05_23 2025-05-23 5625 5097 135 23516226 GCF_000267205.2 PRJNA224116 SAMN02435978 AKMQ00000000.1 na 1005548 562 Escherichia coli EC1863 strain=EC1863 na latest Scaffold Minor Full 2012-06-15 ASM26720v2 Institute for Genome Sciences GCA_000267205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/205/GCF_000267205.2_ASM26720v2/ na na na haploid bacteria 5375508 5373050 50.500000 0 370 411 NCBI RefSeq GCF_000267205.2-RS_2025_06_15 2025-06-15 5639 5141 98 na GCF_000267225.2 PRJNA224116 SAMN02435956 AKMP00000000.1 na 1005540 562 Escherichia coli EC1845 strain=EC1845 na latest Scaffold Minor Full 2012-06-15 ASM26722v2 Institute for Genome Sciences GCA_000267225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/225/GCF_000267225.2_ASM26722v2/ na na na haploid bacteria 5362246 5359441 50.500000 0 486 539 NCBI RefSeq GCF_000267225.2-RS_2025_06_16 2025-06-16 5723 5158 108 na GCF_000267245.2 PRJNA224116 SAMN02435931 AKMM00000000.1 na 1005534 562 Escherichia coli EC4448 strain=EC4448 na latest Scaffold Minor Full 2012-06-15 ASM26724v2 Institute for Genome Sciences GCA_000267245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/245/GCF_000267245.2_ASM26724v2/ na na na haploid bacteria 5491524 5487319 50.000000 0 500 565 NCBI RefSeq GCF_000267245.2-RS_2025_06_16 2025-06-16 5864 5321 102 23516226 GCF_000267265.2 PRJNA224116 SAMN02435975 AKML00000000.1 na 1005533 562 Escherichia coli EC4437 strain=EC4437 na latest Scaffold Minor Full 2012-06-15 ASM26726v2 Institute for Genome Sciences GCA_000267265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/265/GCF_000267265.2_ASM26726v2/ na na na haploid bacteria 5403658 5401346 50.000000 0 372 422 NCBI RefSeq GCF_000267265.2-RS_2025_06_15 2025-06-15 5657 5165 95 na GCF_000267285.2 PRJNA224116 SAMN02435985 AKMK00000000.1 na 1005532 562 Escherichia coli EC4436 strain=EC4436 na latest Scaffold Minor Full 2012-06-15 ASM26728v2 Institute for Genome Sciences GCA_000267285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/285/GCF_000267285.2_ASM26728v2/ na na na haploid bacteria 5411936 5409979 50.500000 0 422 455 NCBI RefSeq GCF_000267285.2-RS_2025_06_15 2025-06-15 5692 5177 99 23516226 GCF_000267305.2 PRJNA224116 SAMN02435930 AKMJ00000000.1 na 1005531 562 Escherichia coli EC4439 strain=EC4439 na latest Scaffold Minor Full 2012-06-15 ASM26730v2 Institute for Genome Sciences GCA_000267305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/305/GCF_000267305.2_ASM26730v2/ na na na haploid bacteria 5397564 5394616 50.000000 0 489 533 NCBI RefSeq GCF_000267305.2-RS_2025_06_16 2025-06-16 5753 5197 107 23516226 GCF_000267325.1 PRJNA224116 SAMN02435929 AKMI00000000.1 na 1005530 562 Escherichia coli EC4402 strain=EC4402 na latest Scaffold Major Full 2012-06-15 ASM26732v1 Institute for Genome Sciences GCA_000267325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/325/GCF_000267325.1_ASM26732v1/ na na na haploid bacteria 5454811 5446996 50.500000 0 654 785 NCBI RefSeq GCF_000267325.1-RS_2025_08_12 2025-08-12 5927 5280 98 23516226 GCF_000267345.2 PRJNA224116 SAMN02435923 AKMH00000000.1 na 1005529 562 Escherichia coli EC4013 strain=EC4013 na latest Scaffold Minor Full 2012-06-15 ASM26734v2 Institute for Genome Sciences GCA_000267345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/345/GCF_000267345.2_ASM26734v2/ na na na haploid bacteria 5349923 5346638 50.500000 0 399 462 NCBI RefSeq GCF_000267345.2-RS_2025_06_16 2025-06-16 5647 5138 98 23516226 GCF_000267365.2 PRJNA224116 SAMN02435955 AKMG00000000.1 na 1005528 562 Escherichia coli EC4422 strain=EC4422 na latest Scaffold Minor Full 2012-06-15 ASM26736v2 Institute for Genome Sciences GCA_000267365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/365/GCF_000267365.2_ASM26736v2/ na na na haploid bacteria 5312801 5310231 50.500000 0 352 392 NCBI RefSeq GCF_000267365.2-RS_2025_06_15 2025-06-15 5518 5045 91 23516226 GCF_000267385.2 PRJNA224116 SAMN02435984 AKMF00000000.1 na 1005527 562 Escherichia coli EC4421 strain=EC4421 na latest Scaffold Minor Full 2012-06-15 ASM26738v2 Institute for Genome Sciences GCA_000267385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/385/GCF_000267385.2_ASM26738v2/ na na na haploid bacteria 5313940 5310335 50.500000 0 393 436 NCBI RefSeq GCF_000267385.2-RS_2025_06_15 2025-06-15 5549 5051 97 23516226 GCF_000267405.2 PRJNA224116 SAMN02435983 AKME00000000.1 na 1005526 562 Escherichia coli TW14301 strain=TW14301 na latest Scaffold Minor Full 2012-06-15 ASM26740v2 Institute for Genome Sciences GCA_000267405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/405/GCF_000267405.2_ASM26740v2/ na na na haploid bacteria 5295674 5292995 50.500000 0 437 484 NCBI RefSeq GCF_000267405.2-RS_2025_06_15 2025-06-15 5553 5010 96 23516226 GCF_000267425.2 PRJNA224116 SAMN02435982 AKMD00000000.1 na 1286877 562 Escherichia coli O157:H7 str. TW14313 strain=TW14313 na latest Scaffold Minor Full 2012-06-15 ASM26742v2 Institute for Genome Sciences GCA_000267425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/425/GCF_000267425.2_ASM26742v2/ na na na haploid bacteria 5330280 5326996 50.500000 0 664 726 NCBI RefSeq GCF_000267425.2-RS_2025_06_16 2025-06-16 5705 5101 100 na GCF_000267445.2 PRJNA224116 SAMN02435954 AKMC00000000.1 na 1005524 562 Escherichia coli EC4196 strain=EC4196 na latest Scaffold Minor Full 2012-06-15 ASM26744v2 Institute for Genome Sciences GCA_000267445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/445/GCF_000267445.2_ASM26744v2/ na na na haploid bacteria 5359575 5357545 50.500000 0 515 572 NCBI RefSeq GCF_000267445.2-RS_2025_06_16 2025-06-16 5722 5175 102 na GCF_000267465.2 PRJNA224116 SAMN02435928 AKMB00000000.1 na 1005523 562 Escherichia coli EC4203 strain=EC4203 na latest Scaffold Minor Full 2012-06-15 ASM26746v2 Institute for Genome Sciences GCA_000267465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/465/GCF_000267465.2_ASM26746v2/ na na na haploid bacteria 5391129 5386213 50.500000 0 489 551 NCBI RefSeq GCF_000267465.2-RS_2025_06_15 2025-06-15 5779 5202 110 23516226 GCF_000267485.2 PRJNA224116 SAMN02435933 AKKX00000000.1 na 1005473 562 Escherichia coli FDA517 strain=FDA517 na latest Scaffold Minor Full 2012-06-15 ASM26748v2 Institute for Genome Sciences GCA_000267485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/485/GCF_000267485.2_ASM26748v2/ na na na haploid bacteria 5522241 5519369 50.000000 0 487 532 NCBI RefSeq GCF_000267485.2-RS_2025_06_15 2025-06-15 5906 5333 103 23516226 GCF_000267505.2 PRJNA224116 SAMN02435915 AKKY00000000.1 na 1005475 562 Escherichia coli FRIK1996 strain=FRIK1996 na latest Scaffold Minor Full 2012-06-15 ASM26750v2 Institute for Genome Sciences GCA_000267505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/505/GCF_000267505.2_ASM26750v2/ na na na haploid bacteria 5432058 5429286 50.500000 0 536 579 NCBI RefSeq GCF_000267505.2-RS_2025_06_16 2025-06-16 5891 5270 107 23516226 GCF_000267525.2 PRJNA224116 SAMN02435986 AKKZ00000000.1 na 1005476 562 Escherichia coli FRIK1985 strain=FRIK1985 na latest Scaffold Minor Full 2012-06-15 ASM26752v2 Institute for Genome Sciences GCA_000267525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/525/GCF_000267525.2_ASM26752v2/ na na na haploid bacteria 5538631 5535202 50.500000 0 671 729 NCBI RefSeq GCF_000267525.2-RS_2025_06_16 2025-06-16 6047 5393 113 23516226 GCF_000267545.1 PRJNA224116 SAMN02603608 na na 1196835 316 Stutzerimonas stutzeri CCUG 29243 strain=CCUG 29243 na latest Complete Genome Major Full 2012-06-13 ASM26754v1 MICROGEN: Microbial Comparative Genomics GCA_000267545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/545/GCF_000267545.1_ASM26754v1/ na na na haploid bacteria 4709064 4709064 62.500000 1 1 1 NCBI RefSeq GCF_000267545.1-RS_2026_02_02 2026-02-02 4427 4280 78 23144395 GCF_000267565.1 PRJNA224116 SAMN00989039 AJXA00000000.1 na 1176487 28901 Salmonella enterica subsp. enterica serovar Typhi str. ST0208 strain=ST0208 na latest Contig Major Full 2012-06-13 YKP860805.1 University of Malaya GCA_000267565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/565/GCF_000267565.1_YKP860805.1/ na na na haploid bacteria 4690773 4690773 52.000000 0 222 222 NCBI RefSeq GCF_000267565.1-RS_2025_04_26 2025-04-26 4776 4317 77 22933756 GCF_000267585.2 PRJNA224116 SAMN02435922 AKLZ00000000.1 na 1005521 562 Escherichia coli TW09195 strain=TW09195 na latest Scaffold Minor Full 2012-06-15 ASM26758v2 Institute for Genome Sciences GCA_000267585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/585/GCF_000267585.2_ASM26758v2/ na na na haploid bacteria 5468826 5463918 50.500000 0 1163 1287 NCBI RefSeq GCF_000267585.2-RS_2025_06_16 2025-06-16 6131 5399 98 23516226 GCF_000267605.2 PRJNA224116 SAMN02435952 AKLX00000000.1 na 1005519 562 Escherichia coli TW09098 strain=TW09098 na latest Scaffold Minor Full 2012-06-15 ASM26760v2 Institute for Genome Sciences GCA_000267605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/605/GCF_000267605.2_ASM26760v2/ na na na haploid bacteria 5483302 5480602 50.500000 0 441 485 NCBI RefSeq GCF_000267605.2-RS_2025_06_16 2025-06-16 5779 5236 95 23516226 GCF_000267625.2 PRJNA224116 SAMN02435980 AKLU00000000.1 na 1005516 562 Escherichia coli TW07945 strain=TW07945 na latest Scaffold Minor Full 2012-06-15 ASM26762v2 Institute for Genome Sciences GCA_000267625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/625/GCF_000267625.2_ASM26762v2/ na na na haploid bacteria 5362277 5358595 50.500000 0 356 403 NCBI RefSeq GCF_000267625.2-RS_2025_06_17 2025-06-17 5598 5082 102 23516226 GCF_000267645.2 PRJNA224116 SAMN02435979 AKLS00000000.1 na 1005510 562 Escherichia coli PA42 strain=PA42 na latest Scaffold Minor Full 2012-06-15 ASM26764v2 Institute for Genome Sciences GCA_000267645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/645/GCF_000267645.2_ASM26764v2/ na na na haploid bacteria 5390951 5389317 50.500000 0 433 466 NCBI RefSeq GCF_000267645.2-RS_2025_06_16 2025-06-16 5717 5184 103 na GCF_000267665.2 PRJNA224116 SAMN00769924 AKLR00000000.1 na 1005509 562 Escherichia coli PA41 strain=PA41 na latest Scaffold Minor Full 2012-06-15 ASM26766v2 Institute for Genome Sciences GCA_000267665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/665/GCF_000267665.2_ASM26766v2/ na na na haploid bacteria 5473898 5472307 50.500000 0 525 565 NCBI RefSeq GCF_000267665.2-RS_2025_06_16 2025-06-16 5869 5287 100 na GCF_000267685.2 PRJNA224116 SAMN02435919 AKLP00000000.1 na 1005507 562 Escherichia coli PA39 strain=PA39 na latest Scaffold Minor Full 2012-06-15 ASM26768v2 Institute for Genome Sciences GCA_000267685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/685/GCF_000267685.2_ASM26768v2/ na na na haploid bacteria 5364936 5358480 50.500000 0 794 888 NCBI RefSeq GCF_000267685.2-RS_2025_06_15 2025-06-15 5856 5171 110 na GCF_000267705.2 PRJNA224116 SAMN02435990 AKLO00000000.1 na 1005504 562 Escherichia coli PA33 strain=PA33 na latest Scaffold Minor Full 2012-06-15 ASM26770v2 Institute for Genome Sciences GCA_000267705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/705/GCF_000267705.2_ASM26770v2/ na na na haploid bacteria 5347937 5345178 50.500000 0 548 595 NCBI RefSeq GCF_000267705.2-RS_2025_06_16 2025-06-16 5722 5134 104 na GCF_000267725.2 PRJNA224116 SAMN02435951 AKLN00000000.1 na 1005503 562 Escherichia coli PA32 strain=PA32 na latest Scaffold Minor Full 2012-06-15 ASM26772v2 Institute for Genome Sciences GCA_000267725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/725/GCF_000267725.2_ASM26772v2/ na na na haploid bacteria 5363077 5359898 50.500000 0 556 606 NCBI RefSeq GCF_000267725.2-RS_2025_06_15 2025-06-15 5703 5141 102 na GCF_000267745.2 PRJNA224116 SAMN02435918 AKLM00000000.1 na 1005502 562 Escherichia coli PA31 strain=PA31 na latest Scaffold Minor Full 2012-06-15 ASM26774v2 Institute for Genome Sciences GCA_000267745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/745/GCF_000267745.2_ASM26774v2/ na na na haploid bacteria 5369413 5366281 50.500000 0 543 597 NCBI RefSeq GCF_000267745.2-RS_2025_06_15 2025-06-15 5715 5121 103 na GCF_000267765.2 PRJNA224116 SAMN02435926 AKLL00000000.1 na 1005501 562 Escherichia coli PA28 strain=PA28 na latest Scaffold Minor Full 2012-06-15 ASM26776v2 Institute for Genome Sciences GCA_000267765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/765/GCF_000267765.2_ASM26776v2/ na na na haploid bacteria 5402274 5399260 50.000000 0 429 471 NCBI RefSeq GCF_000267765.2-RS_2025_06_15 2025-06-15 5706 5167 100 na GCF_000267785.2 PRJNA224116 SAMN02435917 AKLK00000000.1 na 1005500 562 Escherichia coli PA25 strain=PA25 na latest Scaffold Minor Full 2012-06-15 ASM26778v2 Institute for Genome Sciences GCA_000267785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/785/GCF_000267785.2_ASM26778v2/ na na na haploid bacteria 5366179 5363021 50.500000 0 423 462 NCBI RefSeq GCF_000267785.2-RS_2025_06_16 2025-06-16 5673 5152 104 na GCF_000267805.2 PRJNA224116 SAMN02435950 AKLJ00000000.1 na 1005499 562 Escherichia coli PA24 strain=PA24 na latest Scaffold Minor Full 2012-06-15 ASM26780v2 Institute for Genome Sciences GCA_000267805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/805/GCF_000267805.2_ASM26780v2/ na na na haploid bacteria 5315868 5313552 50.500000 0 465 512 NCBI RefSeq GCF_000267805.2-RS_2025_06_17 2025-06-17 5580 5062 95 na GCF_000267825.2 PRJNA224116 SAMN02435916 AKLH00000000.1 na 1005496 562 Escherichia coli PA15 strain=PA15 na latest Scaffold Minor Full 2012-06-15 ASM26782v2 Institute for Genome Sciences GCA_000267825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/825/GCF_000267825.2_ASM26782v2/ na na na haploid bacteria 5439602 5437832 50.500000 0 492 529 NCBI RefSeq GCF_000267825.2-RS_2025_06_15 2025-06-15 5798 5218 107 na GCF_000267845.2 PRJNA224116 SAMN02435936 AKLG00000000.1 na 1005495 562 Escherichia coli PA14 strain=PA14 na latest Scaffold Minor Full 2012-06-15 ASM26784v2 Institute for Genome Sciences GCA_000267845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/845/GCF_000267845.2_ASM26784v2/ na na na haploid bacteria 5469138 5466082 50.500000 0 560 614 NCBI RefSeq GCF_000267845.2-RS_2025_06_15 2025-06-15 5862 5255 99 na GCF_000267865.2 PRJNA224116 SAMN02435935 AKLF00000000.1 na 1005494 562 Escherichia coli PA10 strain=PA10 na latest Scaffold Minor Full 2012-06-15 ASM26786v2 Institute for Genome Sciences GCA_000267865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/865/GCF_000267865.2_ASM26786v2/ na na na haploid bacteria 5569047 5562978 50.500000 0 485 619 NCBI RefSeq GCF_000267865.2-RS_2025_06_16 2025-06-16 6009 5395 103 na GCF_000267885.2 PRJNA224116 SAMN02435989 AKLE00000000.1 na 1005493 562 Escherichia coli PA9 strain=PA9 na latest Scaffold Minor Full 2012-06-15 ASM26788v2 Institute for Genome Sciences GCA_000267885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/885/GCF_000267885.2_ASM26788v2/ na na na haploid bacteria 5417958 5415428 50.500000 0 386 426 NCBI RefSeq GCF_000267885.2-RS_2025_06_15 2025-06-15 5702 5184 99 23516226 GCF_000267905.2 PRJNA224116 SAMN02435988 AKLD00000000.1 na 1005490 562 Escherichia coli PA5 strain=PA5 na latest Scaffold Minor Full 2012-06-15 ASM26790v2 Institute for Genome Sciences GCA_000267905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/905/GCF_000267905.2_ASM26790v2/ na na na haploid bacteria 5347112 5344723 50.500000 0 512 553 NCBI RefSeq GCF_000267905.2-RS_2025_06_15 2025-06-15 5686 5124 100 23516226 GCF_000267925.2 PRJNA224116 SAMN02435987 AKLC00000000.1 na 1005488 562 Escherichia coli PA3 strain=PA3 na latest Scaffold Minor Full 2012-06-15 ASM26792v2 Institute for Genome Sciences GCA_000267925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/925/GCF_000267925.2_ASM26792v2/ na na na haploid bacteria 5368310 5363669 50.500000 0 428 507 NCBI RefSeq GCF_000267925.2-RS_2025_06_15 2025-06-15 5696 5172 99 23516226 GCF_000267945.2 PRJNA224116 SAMN02435949 AKLB00000000.1 na 1005481 562 Escherichia coli 93-001 strain=93-001 na latest Scaffold Minor Full 2012-06-15 ASM26794v2 Institute for Genome Sciences GCA_000267945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/945/GCF_000267945.2_ASM26794v2/ na na na haploid bacteria 5378490 5375591 50.500000 0 438 478 NCBI RefSeq GCF_000267945.2-RS_2025_06_15 2025-06-15 5674 5183 97 na GCF_000267965.2 PRJNA224116 SAMN02435934 AKLA00000000.1 na 1005478 562 Escherichia coli FRIK1990 strain=FRIK1990 na latest Scaffold Minor Full 2012-06-15 ASM26796v2 Institute for Genome Sciences GCA_000267965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/965/GCF_000267965.2_ASM26796v2/ na na na haploid bacteria 5518143 5514082 50.500000 0 569 628 NCBI RefSeq GCF_000267965.2-RS_2025_06_17 2025-06-17 5954 5371 97 23516226 GCF_000267985.1 PRJNA224116 SAMN00016949 AKMW00000000.1 na 754091 623 Shigella flexneri CCH060 strain=CCH060 na latest Contig Major Full 2012-06-14 ASM26798v1 Institute for Genome Sciences GCA_000267985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/267/985/GCF_000267985.1_ASM26798v1/ na na na haploid bacteria 4771765 4771765 51.000000 0 80 80 NCBI RefSeq GCF_000267985.1-RS_2026_07_02 2026-07-02 5023 4066 117 na GCF_000268105.1 PRJNA224116 SAMN00752563 AKNG00000000.1 na 766143 622 Shigella dysenteriae 225-75 strain=225-75 na latest Contig Major Full 2012-06-14 ASM26810v1 Institute for Genome Sciences GCA_000268105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/105/GCF_000268105.1_ASM26810v1/ na na na haploid bacteria 4813170 4813170 51.000000 0 111 111 NCBI RefSeq GCF_000268105.1-RS_2026_06_10 2026-06-10 5162 4081 144 na GCF_000268145.1 PRJNA224116 SAMN00016948 AKNA00000000.1 na 766138 621 Shigella boydii 965-58 strain=965-58 na latest Contig Major Full 2012-06-14 ASM26814v1 Institute for Genome Sciences GCA_000268145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/145/GCF_000268145.1_ASM26814v1/ na na na haploid bacteria 5184598 5184598 50.500000 0 96 96 NCBI RefSeq GCF_000268145.1-RS_2026_06_10 2026-06-10 5425 4176 135 na GCF_000268185.1 PRJNA224116 SAMN00752565 AKNB00000000.1 na 766140 621 Shigella boydii 4444-74 strain=4444-74 na latest Contig Major Full 2012-06-14 ASM26818v1 Institute for Genome Sciences GCA_000268185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/185/GCF_000268185.1_ASM26818v1/ na na na haploid bacteria 4976410 4976410 51.000000 0 313 313 NCBI RefSeq GCF_000268185.1-RS_2025_07_05 2025-07-05 5330 4195 151 na GCF_000268285.2 PRJNA224116 SAMN02469452 AHJU00000000.2 na 1128399 396 Rhizobium phaseoli Ch24-10 strain=Ch24-10 na latest Scaffold Major Full 2015-05-19 RPHCH2410v2 Esperanza Martínez-Romero, Ph. D GCA_000268285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/285/GCF_000268285.2_RPHCH2410v2/ na na na haploid bacteria 6732565 6732565 61.500000 4 28 28 NCBI RefSeq GCF_000268285.2-RS_2026_04_24 2026-04-24 6561 6247 64 22858268 GCF_000268305.3 PRJNA224116 SAMN02428975 AIDX00000000.1 na 482234 1329 Streptococcus canis FSL Z3-227 strain=FSL Z3-227 na latest Contig Major Full 2012-12-13 ASM26830v2 Cornell University GCA_000268305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/305/GCF_000268305.3_ASM26830v2/ na na na haploid bacteria 2267856 2267856 39.500000 0 1 1 NCBI RefSeq GCF_000268305.3-RS_2025_04_02 2025-04-02 2244 2031 89 22666370 GCF_000268325.1 PRJNA224116 SAMN02141449 AKRN00000000.1 na 992128 632 Yersinia pestis PY-02 strain=PY-02 na latest Contig Major Full 2012-06-15 ASM26832v1 Institute for Genome Sciences GCA_000268325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/325/GCF_000268325.1_ASM26832v1/ na na na haploid bacteria 4643211 4643211 47.500000 0 578 578 NCBI RefSeq GCF_000268325.1-RS_2026_06_03 2026-06-03 4531 4151 77 na GCF_000268345.1 PRJNA224116 SAMN02141452 AKRQ00000000.1 na 992131 632 Yersinia pestis PY-05 strain=PY-05 na latest Contig Major Full 2012-06-15 ASM26834v1 Institute for Genome Sciences GCA_000268345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/345/GCF_000268345.1_ASM26834v1/ na na na haploid bacteria 4685275 4685275 47.500000 0 479 479 NCBI RefSeq GCF_000268345.1-RS_2026_06_03 2026-06-03 4489 4117 78 na GCF_000268365.1 PRJNA224116 SAMN02141453 AKRR00000000.1 na 992132 632 Yersinia pestis PY-06 strain=PY-06 na latest Contig Major Full 2012-06-15 ASM26836v1 Institute for Genome Sciences GCA_000268365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/365/GCF_000268365.1_ASM26836v1/ na na na haploid bacteria 4787942 4787942 47.500000 0 524 524 NCBI RefSeq GCF_000268365.1-RS_2026_06_03 2026-06-03 4596 4201 76 na GCF_000268385.1 PRJNA224116 SAMN02141454 AKRS00000000.1 na 992133 632 Yersinia pestis PY-07 strain=PY-07 na latest Contig Major Full 2012-06-15 ASM26838v1 Institute for Genome Sciences GCA_000268385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/385/GCF_000268385.1_ASM26838v1/ na na na haploid bacteria 4764013 4764013 47.500000 0 471 471 NCBI RefSeq GCF_000268385.1-RS_2026_06_03 2026-06-03 4541 4176 78 na GCF_000268405.1 PRJNA224116 SAMN02141455 AKRT00000000.1 na 992134 632 Yersinia pestis PY-08 strain=PY-08 na latest Contig Major Full 2012-06-15 ASM26840v1 Institute for Genome Sciences GCA_000268405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/405/GCF_000268405.1_ASM26840v1/ na na na haploid bacteria 4763599 4763599 47.500000 0 515 515 NCBI RefSeq GCF_000268405.1-RS_2026_03_20 2026-03-20 4579 4194 78 na GCF_000268425.1 PRJNA224116 SAMN02141456 AKRU00000000.1 na 992135 632 Yersinia pestis PY-09 strain=PY-09 na latest Contig Major Full 2012-06-15 ASM26842v1 Institute for Genome Sciences GCA_000268425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/425/GCF_000268425.1_ASM26842v1/ na na na haploid bacteria 4645028 4645028 47.500000 0 541 541 NCBI RefSeq GCF_000268425.1-RS_2026_03_20 2026-03-20 4505 4119 77 na GCF_000268445.1 PRJNA224116 SAMN02141457 AKRV00000000.1 na 992136 632 Yersinia pestis PY-10 strain=PY-10 na latest Contig Major Full 2012-06-15 ASM26844v1 Institute for Genome Sciences GCA_000268445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/445/GCF_000268445.1_ASM26844v1/ na na na haploid bacteria 4740424 4740424 47.500000 0 542 542 NCBI RefSeq GCF_000268445.1-RS_2026_03_20 2026-03-20 4558 4170 78 na GCF_000268465.1 PRJNA224116 SAMN02141460 AKRY00000000.1 na 992139 632 Yersinia pestis PY-13 strain=PY-13 na latest Contig Major Full 2012-06-15 ASM26846v1 Institute for Genome Sciences GCA_000268465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/465/GCF_000268465.1_ASM26846v1/ na na na haploid bacteria 4735638 4735638 47.500000 0 563 563 NCBI RefSeq GCF_000268465.1-RS_2026_03_20 2026-03-20 4590 4205 76 na GCF_000268485.2 PRJNA224116 SAMN02141461 AKRZ00000000.1 na 992140 632 Yersinia pestis PY-14 strain=PY-14 na latest Contig Minor Full 2012-06-15 ASM26848v2 Institute for Genome Sciences GCA_000268485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/485/GCF_000268485.2_ASM26848v2/ na na na haploid bacteria 4588680 4588680 48.000000 0 695 695 NCBI RefSeq GCF_000268485.2-RS_2026_06_03 2026-06-03 4420 4010 77 na GCF_000268505.1 PRJNA224116 SAMN02141463 AKSB00000000.1 na 992142 632 Yersinia pestis PY-16 strain=PY-16 na latest Contig Major Full 2012-06-15 ASM26850v1 Institute for Genome Sciences GCA_000268505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/505/GCF_000268505.1_ASM26850v1/ na na na haploid bacteria 4687256 4687256 47.500000 0 481 481 NCBI RefSeq GCF_000268505.1-RS_2026_03_20 2026-03-20 4494 4133 78 na GCF_000268525.1 PRJNA224116 SAMN02141464 AKSC00000000.1 na 992143 632 Yersinia pestis PY-19 strain=PY-19 na latest Contig Major Full 2012-06-15 ASM26852v1 Institute for Genome Sciences GCA_000268525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/525/GCF_000268525.1_ASM26852v1/ na na na haploid bacteria 4510880 4510880 47.500000 0 535 535 NCBI RefSeq GCF_000268525.1-RS_2026_06_03 2026-06-03 4344 3982 78 na GCF_000268545.1 PRJNA224116 SAMN02141448 AKRM00000000.1 na 992127 632 Yersinia pestis PY-01 strain=PY-01 na latest Contig Major Full 2012-06-15 ASM26854v1 Institute for Genome Sciences GCA_000268545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/545/GCF_000268545.1_ASM26854v1/ na na na haploid bacteria 4734683 4734683 47.500000 0 568 568 NCBI RefSeq GCF_000268545.1-RS_2026_06_03 2026-06-03 4601 4215 79 na GCF_000268565.1 PRJNA224116 SAMN02141450 AKRO00000000.1 na 992129 632 Yersinia pestis PY-03 strain=PY-03 na latest Contig Major Full 2012-06-15 ASM26856v1 Institute for Genome Sciences GCA_000268565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/565/GCF_000268565.1_ASM26856v1/ na na na haploid bacteria 4688983 4688983 47.500000 0 751 751 NCBI RefSeq GCF_000268565.1-RS_2026_06_04 2026-06-04 4676 4229 82 na GCF_000268585.1 PRJNA224116 SAMN02141451 AKRP00000000.1 na 992130 632 Yersinia pestis PY-04 strain=PY-04 na latest Contig Major Full 2012-06-15 ASM26858v1 Institute for Genome Sciences GCA_000268585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/585/GCF_000268585.1_ASM26858v1/ na na na haploid bacteria 4761753 4761753 47.500000 0 528 528 NCBI RefSeq GCF_000268585.1-RS_2026_06_04 2026-06-04 4595 4224 77 na GCF_000268605.1 PRJNA224116 SAMN02141458 AKRW00000000.1 na 992137 632 Yersinia pestis PY-11 strain=PY-11 na latest Contig Major Full 2012-06-15 ASM26860v1 Institute for Genome Sciences GCA_000268605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/605/GCF_000268605.1_ASM26860v1/ na na na haploid bacteria 4682466 4682466 47.500000 0 616 616 NCBI RefSeq GCF_000268605.1-RS_2026_03_20 2026-03-20 4588 4185 78 na GCF_000268625.1 PRJNA224116 SAMN02141459 AKRX00000000.1 na 992138 632 Yersinia pestis PY-12 strain=PY-12 na latest Contig Major Full 2012-06-15 ASM26862v1 Institute for Genome Sciences GCA_000268625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/625/GCF_000268625.1_ASM26862v1/ na na na haploid bacteria 4827600 4827600 47.500000 0 491 491 NCBI RefSeq GCF_000268625.1-RS_2026_03_20 2026-03-20 4639 4260 82 na GCF_000268645.1 PRJNA224116 SAMN02141462 AKSA00000000.1 na 992141 632 Yersinia pestis PY-15 strain=PY-15 na latest Contig Major Full 2012-06-15 ASM26864v1 Institute for Genome Sciences GCA_000268645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/645/GCF_000268645.1_ASM26864v1/ na na na haploid bacteria 4753444 4753444 47.500000 0 503 503 NCBI RefSeq GCF_000268645.1-RS_2026_03_20 2026-03-20 4548 4177 76 na GCF_000268665.1 PRJNA224116 SAMN02141465 AKSD00000000.1 na 992144 632 Yersinia pestis PY-25 strain=PY-25 na latest Contig Major Full 2012-06-15 ASM26866v1 Institute for Genome Sciences GCA_000268665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/665/GCF_000268665.1_ASM26866v1/ na na na haploid bacteria 4769912 4769912 47.500000 0 533 533 NCBI RefSeq GCF_000268665.1-RS_2026_06_04 2026-06-04 4611 4223 78 na GCF_000268685.1 PRJNA224116 SAMN02141466 AKSE00000000.1 na 992145 632 Yersinia pestis PY-29 strain=PY-29 na latest Contig Major Full 2012-06-15 ASM26868v1 Institute for Genome Sciences GCA_000268685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/685/GCF_000268685.1_ASM26868v1/ na na na haploid bacteria 4758035 4758035 47.500000 0 428 428 NCBI RefSeq GCF_000268685.1-RS_2026_06_03 2026-06-03 4501 4155 76 na GCF_000268705.1 PRJNA224116 SAMN02141467 AKSF00000000.1 na 992146 632 Yersinia pestis PY-32 strain=PY-32 na latest Contig Major Full 2012-06-15 ASM26870v1 Institute for Genome Sciences GCA_000268705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/705/GCF_000268705.1_ASM26870v1/ na na na haploid bacteria 4900596 4900596 47.500000 0 576 576 NCBI RefSeq GCF_000268705.1-RS_2026_03_20 2026-03-20 4748 4344 79 na GCF_000268725.2 PRJNA224116 SAMN02141468 AKSG00000000.1 na 992147 632 Yersinia pestis PY-34 strain=PY-34 na latest Contig Minor Full 2012-06-15 ASM26872v2 Institute for Genome Sciences GCA_000268725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/725/GCF_000268725.2_ASM26872v2/ na na na haploid bacteria 4681941 4681941 47.500000 0 513 513 NCBI RefSeq GCF_000268725.2-RS_2026_06_03 2026-06-03 4479 4124 77 na GCF_000268745.1 PRJNA224116 SAMN02141471 AKSJ00000000.1 na 992150 632 Yersinia pestis PY-45 strain=PY-45 na latest Contig Major Full 2012-06-15 ASM26874v1 Institute for Genome Sciences GCA_000268745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/745/GCF_000268745.1_ASM26874v1/ na na na haploid bacteria 4754544 4754544 47.500000 0 471 471 NCBI RefSeq GCF_000268745.1-RS_2026_06_04 2026-06-04 4523 4162 78 na GCF_000268765.1 PRJNA224116 SAMN02141474 AKSM00000000.1 na 992153 632 Yersinia pestis PY-48 strain=PY-48 na latest Contig Major Full 2012-06-15 ASM26876v1 Institute for Genome Sciences GCA_000268765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/765/GCF_000268765.1_ASM26876v1/ na na na haploid bacteria 4630493 4630493 47.500000 0 584 584 NCBI RefSeq GCF_000268765.1-RS_2026_06_04 2026-06-04 4498 4098 83 na GCF_000268785.1 PRJNA224116 SAMN02141476 AKSO00000000.1 na 992155 632 Yersinia pestis PY-53 strain=PY-53 na latest Contig Major Full 2012-06-15 ASM26878v1 Institute for Genome Sciences GCA_000268785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/785/GCF_000268785.1_ASM26878v1/ na na na haploid bacteria 4650519 4650519 47.500000 0 650 650 NCBI RefSeq GCF_000268785.1-RS_2026_06_04 2026-06-04 4514 4110 77 na GCF_000268805.2 PRJNA224116 SAMN02141477 AKSP00000000.1 na 992156 632 Yersinia pestis PY-54 strain=PY-54 na latest Contig Minor Full 2012-06-15 ASM26880v2 Institute for Genome Sciences GCA_000268805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/805/GCF_000268805.2_ASM26880v2/ na na na haploid bacteria 4604232 4604232 47.500000 0 1330 1330 NCBI RefSeq GCF_000268805.2-RS_2026_06_05 2026-06-05 4592 4110 67 na GCF_000268825.1 PRJNA224116 SAMN02141478 AKSQ00000000.1 na 992157 632 Yersinia pestis PY-55 strain=PY-55 na latest Contig Major Full 2012-06-15 ASM26882v1 Institute for Genome Sciences GCA_000268825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/825/GCF_000268825.1_ASM26882v1/ na na na haploid bacteria 4753010 4753010 47.500000 0 471 471 NCBI RefSeq GCF_000268825.1-RS_2026_06_03 2026-06-03 4527 4165 77 na GCF_000268845.1 PRJNA224116 SAMN02141479 AKSR00000000.1 na 992158 632 Yersinia pestis PY-56 strain=PY-56 na latest Contig Major Full 2012-06-15 ASM26884v1 Institute for Genome Sciences GCA_000268845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/845/GCF_000268845.1_ASM26884v1/ na na na haploid bacteria 4650569 4650569 47.500000 0 616 616 NCBI RefSeq GCF_000268845.1-RS_2026_06_04 2026-06-04 4547 4143 76 na GCF_000268865.2 PRJNA224116 SAMN02141480 AKSS00000000.1 na 992159 632 Yersinia pestis PY-58 strain=PY-58 na latest Contig Minor Full 2012-06-15 ASM26886v2 Institute for Genome Sciences GCA_000268865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/865/GCF_000268865.2_ASM26886v2/ na na na haploid bacteria 4602734 4602734 47.500000 0 832 832 NCBI RefSeq GCF_000268865.2-RS_2026_06_03 2026-06-03 4531 4090 76 na GCF_000268885.1 PRJNA224116 SAMN02141481 AKST00000000.1 na 992160 632 Yersinia pestis PY-59 strain=PY-59 na latest Contig Major Full 2012-06-15 ASM26888v1 Institute for Genome Sciences GCA_000268885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/885/GCF_000268885.1_ASM26888v1/ na na na haploid bacteria 4676686 4676686 47.500000 0 602 602 NCBI RefSeq GCF_000268885.1-RS_2026_06_04 2026-06-04 4542 4146 76 na GCF_000268905.1 PRJNA224116 SAMN02141482 AKSU00000000.1 na 992161 632 Yersinia pestis PY-60 strain=PY-60 na latest Contig Major Full 2012-06-15 ASM26890v1 Institute for Genome Sciences GCA_000268905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/905/GCF_000268905.1_ASM26890v1/ na na na haploid bacteria 4648076 4648076 47.500000 0 521 521 NCBI RefSeq GCF_000268905.1-RS_2026_06_03 2026-06-03 4494 4110 77 na GCF_000268925.1 PRJNA224116 SAMN02141484 AKSW00000000.1 na 992163 632 Yersinia pestis PY-63 strain=PY-63 na latest Contig Major Full 2012-06-15 ASM26892v1 Institute for Genome Sciences GCA_000268925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/925/GCF_000268925.1_ASM26892v1/ na na na haploid bacteria 4680474 4680474 47.500000 0 524 524 NCBI RefSeq GCF_000268925.1-RS_2026_06_03 2026-06-03 4468 4110 79 na GCF_000268945.1 PRJNA224116 SAMN02141485 AKSX00000000.1 na 992164 632 Yersinia pestis PY-64 strain=PY-64 na latest Contig Major Full 2012-06-15 ASM26894v1 Institute for Genome Sciences GCA_000268945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/945/GCF_000268945.1_ASM26894v1/ na na na haploid bacteria 4682001 4682001 47.500000 0 974 974 NCBI RefSeq GCF_000268945.1-RS_2026_06_06 2026-06-06 4723 4259 73 na GCF_000268965.1 PRJNA224116 SAMN02141486 AKSY00000000.1 na 992165 632 Yersinia pestis PY-65 strain=PY-65 na latest Contig Major Full 2012-06-15 ASM26896v1 Institute for Genome Sciences GCA_000268965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/965/GCF_000268965.1_ASM26896v1/ na na na haploid bacteria 4641789 4641789 47.500000 0 498 498 NCBI RefSeq GCF_000268965.1-RS_2026_06_04 2026-06-04 4461 4082 77 na GCF_000268985.1 PRJNA224116 SAMN02141488 AKTA00000000.1 na 992167 632 Yersinia pestis PY-71 strain=PY-71 na latest Contig Major Full 2012-06-15 ASM26898v1 Institute for Genome Sciences GCA_000268985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/268/985/GCF_000268985.1_ASM26898v1/ na na na haploid bacteria 4498491 4498491 47.500000 0 477 477 NCBI RefSeq GCF_000268985.1-RS_2026_06_03 2026-06-03 4331 3982 73 na GCF_000269005.1 PRJNA224116 SAMN02141489 AKTB00000000.1 na 992168 632 Yersinia pestis PY-72 strain=PY-72 na latest Contig Major Full 2012-06-15 ASM26900v1 Institute for Genome Sciences GCA_000269005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/005/GCF_000269005.1_ASM26900v1/ na na na haploid bacteria 4471609 4471609 47.500000 0 544 544 NCBI RefSeq GCF_000269005.1-RS_2026_06_03 2026-06-03 4335 3977 76 na GCF_000269025.1 PRJNA224116 SAMN02141490 AKTC00000000.1 na 992169 632 Yersinia pestis PY-76 strain=PY-76 na latest Contig Major Full 2012-06-15 ASM26902v1 Institute for Genome Sciences GCA_000269025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/025/GCF_000269025.1_ASM26902v1/ na na na haploid bacteria 4498987 4498987 47.500000 0 462 462 NCBI RefSeq GCF_000269025.1-RS_2026_06_03 2026-06-03 4300 3962 73 na GCF_000269045.1 PRJNA224116 SAMN02141492 AKTE00000000.1 na 992171 632 Yersinia pestis PY-89 strain=PY-89 na latest Contig Major Full 2012-06-15 ASM26904v1 Institute for Genome Sciences GCA_000269045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/045/GCF_000269045.1_ASM26904v1/ na na na haploid bacteria 4677447 4677447 47.500000 0 703 703 NCBI RefSeq GCF_000269045.1-RS_2026_06_03 2026-06-03 4566 4150 72 na GCF_000269065.1 PRJNA224116 SAMN02141493 AKTF00000000.1 na 992172 632 Yersinia pestis PY-90 strain=PY-90 na latest Contig Major Full 2012-06-15 ASM26906v1 Institute for Genome Sciences GCA_000269065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/065/GCF_000269065.1_ASM26906v1/ na na na haploid bacteria 4675930 4675930 47.500000 0 512 512 NCBI RefSeq GCF_000269065.1-RS_2026_06_03 2026-06-03 4474 4107 75 na GCF_000269085.1 PRJNA224116 SAMN02141494 AKTG00000000.1 na 992173 632 Yersinia pestis PY-91 strain=PY-91 na latest Contig Major Full 2012-06-15 ASM26908v1 Institute for Genome Sciences GCA_000269085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/085/GCF_000269085.1_ASM26908v1/ na na na haploid bacteria 4675127 4675127 47.500000 0 543 543 NCBI RefSeq GCF_000269085.1-RS_2026_06_03 2026-06-03 4461 4112 76 na GCF_000269105.1 PRJNA224116 SAMN02141495 AKTH00000000.1 na 992174 632 Yersinia pestis PY-92 strain=PY-92 na latest Contig Major Full 2012-06-15 ASM26910v1 Institute for Genome Sciences GCA_000269105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/105/GCF_000269105.1_ASM26910v1/ na na na haploid bacteria 4762725 4762725 47.500000 0 545 545 NCBI RefSeq GCF_000269105.1-RS_2026_06_03 2026-06-03 4612 4216 79 na GCF_000269125.1 PRJNA224116 SAMN02141496 AKTI00000000.1 na 992175 632 Yersinia pestis PY-93 strain=PY-93 na latest Contig Major Full 2012-06-15 ASM26912v1 Institute for Genome Sciences GCA_000269125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/125/GCF_000269125.1_ASM26912v1/ na na na haploid bacteria 4770670 4770670 47.500000 0 487 487 NCBI RefSeq GCF_000269125.1-RS_2026_06_03 2026-06-03 4576 4188 78 na GCF_000269145.1 PRJNA224116 SAMN02141499 AKTL00000000.1 na 992178 632 Yersinia pestis PY-96 strain=PY-96 na latest Contig Major Full 2012-06-15 ASM26914v1 Institute for Genome Sciences GCA_000269145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/145/GCF_000269145.1_ASM26914v1/ na na na haploid bacteria 4706123 4706123 47.500000 0 580 580 NCBI RefSeq GCF_000269145.1-RS_2026_06_03 2026-06-03 4562 4171 76 na GCF_000269165.1 PRJNA224116 SAMN02141500 AKTM00000000.1 na 992179 632 Yersinia pestis PY-98 strain=PY-98 na latest Contig Major Full 2012-06-15 ASM26916v1 Institute for Genome Sciences GCA_000269165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/165/GCF_000269165.1_ASM26916v1/ na na na haploid bacteria 4780039 4780039 47.500000 0 520 520 NCBI RefSeq GCF_000269165.1-RS_2026_03_20 2026-03-20 4560 4192 77 na GCF_000269185.1 PRJNA224116 SAMN02141501 AKTN00000000.1 na 992180 632 Yersinia pestis PY-99 strain=PY-99 na latest Contig Major Full 2012-06-15 ASM26918v1 Institute for Genome Sciences GCA_000269185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/185/GCF_000269185.1_ASM26918v1/ na na na haploid bacteria 4662275 4662275 47.500000 0 519 519 NCBI RefSeq GCF_000269185.1-RS_2026_06_04 2026-06-04 4509 4136 78 na GCF_000269205.1 PRJNA224116 SAMN02141502 AKTO00000000.1 na 992181 632 Yersinia pestis PY-100 strain=PY-100 na latest Contig Major Full 2012-06-15 ASM26920v1 Institute for Genome Sciences GCA_000269205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/205/GCF_000269205.1_ASM26920v1/ na na na haploid bacteria 4631765 4631765 47.500000 0 491 491 NCBI RefSeq GCF_000269205.1-RS_2026_06_03 2026-06-03 4427 4068 77 na GCF_000269225.1 PRJNA224116 SAMN02141504 AKTQ00000000.1 na 992183 632 Yersinia pestis PY-102 strain=PY-102 na latest Contig Major Full 2012-06-15 ASM26922v1 Institute for Genome Sciences GCA_000269225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/225/GCF_000269225.1_ASM26922v1/ na na na haploid bacteria 4672350 4672350 47.500000 0 537 537 NCBI RefSeq GCF_000269225.1-RS_2026_06_04 2026-06-04 4508 4129 76 na GCF_000269245.1 PRJNA224116 SAMN02141506 AKTS00000000.1 na 992185 632 Yersinia pestis PY-113 strain=PY-113 na latest Contig Major Full 2012-06-15 ASM26924v1 Institute for Genome Sciences GCA_000269245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/245/GCF_000269245.1_ASM26924v1/ na na na haploid bacteria 4615891 4615891 47.500000 0 600 600 NCBI RefSeq GCF_000269245.1-RS_2026_03_20 2026-03-20 4449 4081 77 na GCF_000269265.1 PRJNA224116 SAMN02141469 AKSH00000000.1 na 992148 632 Yersinia pestis PY-36 strain=PY-36 na latest Contig Major Full 2012-06-15 ASM26926v1 Institute for Genome Sciences GCA_000269265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/265/GCF_000269265.1_ASM26926v1/ na na na haploid bacteria 4716906 4716906 47.500000 0 591 591 NCBI RefSeq GCF_000269265.1-RS_2026_06_04 2026-06-04 4612 4224 77 na GCF_000269285.2 PRJNA224116 SAMN02141470 AKSI00000000.1 na 992149 632 Yersinia pestis PY-42 strain=PY-42 na latest Contig Minor Full 2012-06-15 ASM26928v2 Institute for Genome Sciences GCA_000269285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/285/GCF_000269285.2_ASM26928v2/ na na na haploid bacteria 4732312 4732312 47.500000 0 522 522 NCBI RefSeq GCF_000269285.2-RS_2026_06_03 2026-06-03 4553 4168 74 na GCF_000269305.1 PRJNA224116 SAMN02141472 AKSK00000000.1 na 992151 632 Yersinia pestis PY-46 strain=PY-46 na latest Contig Major Full 2012-06-15 ASM26930v1 Institute for Genome Sciences GCA_000269305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/305/GCF_000269305.1_ASM26930v1/ na na na haploid bacteria 4674925 4674925 47.500000 0 460 460 NCBI RefSeq GCF_000269305.1-RS_2026_06_03 2026-06-03 4476 4110 76 na GCF_000269325.1 PRJNA224116 SAMN02141473 AKSL00000000.1 na 992152 632 Yersinia pestis PY-47 strain=PY-47 na latest Contig Major Full 2012-06-15 ASM26932v1 Institute for Genome Sciences GCA_000269325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/325/GCF_000269325.1_ASM26932v1/ na na na haploid bacteria 4682892 4682892 47.500000 0 534 534 NCBI RefSeq GCF_000269325.1-RS_2026_06_04 2026-06-04 4540 4150 78 na GCF_000269345.1 PRJNA224116 SAMN02141475 AKSN00000000.1 na 992154 632 Yersinia pestis PY-52 strain=PY-52 na latest Contig Major Full 2012-06-15 ASM26934v1 Institute for Genome Sciences GCA_000269345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/345/GCF_000269345.1_ASM26934v1/ na na na haploid bacteria 4689160 4689160 47.500000 0 699 699 NCBI RefSeq GCF_000269345.1-RS_2026_06_04 2026-06-04 4559 4157 72 na GCF_000269365.1 PRJNA224116 SAMN02141483 AKSV00000000.1 na 992162 632 Yersinia pestis PY-61 strain=PY-61 na latest Contig Major Full 2012-06-15 ASM26936v1 Institute for Genome Sciences GCA_000269365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/365/GCF_000269365.1_ASM26936v1/ na na na haploid bacteria 4735275 4735275 47.500000 0 510 510 NCBI RefSeq GCF_000269365.1-RS_2026_06_03 2026-06-03 4525 4157 75 na GCF_000269385.1 PRJNA224116 SAMN02141487 AKSZ00000000.1 na 992166 632 Yersinia pestis PY-66 strain=PY-66 na latest Contig Major Full 2012-06-15 ASM26938v1 Institute for Genome Sciences GCA_000269385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/385/GCF_000269385.1_ASM26938v1/ na na na haploid bacteria 4573944 4573944 48.000000 0 1315 1315 NCBI RefSeq GCF_000269385.1-RS_2026_06_10 2026-06-10 4729 4163 79 na GCF_000269405.1 PRJNA224116 SAMN02141491 AKTD00000000.1 na 992170 632 Yersinia pestis PY-88 strain=PY-88 na latest Contig Major Full 2012-06-15 ASM26940v1 Institute for Genome Sciences GCA_000269405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/405/GCF_000269405.1_ASM26940v1/ na na na haploid bacteria 4634520 4634520 47.500000 0 682 682 NCBI RefSeq GCF_000269405.1-RS_2026_06_04 2026-06-04 4565 4181 74 na GCF_000269425.1 PRJNA224116 SAMN02141497 AKTJ00000000.1 na 992176 632 Yersinia pestis PY-94 strain=PY-94 na latest Contig Major Full 2012-06-15 ASM26942v1 Institute for Genome Sciences GCA_000269425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/425/GCF_000269425.1_ASM26942v1/ na na na haploid bacteria 4644905 4644905 47.500000 0 585 585 NCBI RefSeq GCF_000269425.1-RS_2026_06_04 2026-06-04 4545 4145 77 na GCF_000269445.1 PRJNA224116 SAMN02141498 AKTK00000000.1 na 992177 632 Yersinia pestis PY-95 strain=PY-95 na latest Contig Major Full 2012-06-15 ASM26944v1 Institute for Genome Sciences GCA_000269445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/445/GCF_000269445.1_ASM26944v1/ na na na haploid bacteria 4687267 4687267 47.500000 0 456 456 NCBI RefSeq GCF_000269445.1-RS_2026_06_03 2026-06-03 4470 4116 75 na GCF_000269465.1 PRJNA224116 SAMN02141503 AKTP00000000.1 na 992182 632 Yersinia pestis PY-101 strain=PY-101 na latest Contig Major Full 2012-06-15 ASM26946v1 Institute for Genome Sciences GCA_000269465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/465/GCF_000269465.1_ASM26946v1/ na na na haploid bacteria 4732273 4732273 47.500000 0 500 500 NCBI RefSeq GCF_000269465.1-RS_2026_03_20 2026-03-20 4492 4128 77 na GCF_000269485.1 PRJNA224116 SAMN02141505 AKTR00000000.1 na 992184 632 Yersinia pestis PY-103 strain=PY-103 na latest Contig Major Full 2012-06-15 ASM26948v1 Institute for Genome Sciences GCA_000269485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/485/GCF_000269485.1_ASM26948v1/ na na na haploid bacteria 4591865 4591865 48.000000 0 933 933 NCBI RefSeq GCF_000269485.1-RS_2026_06_04 2026-06-04 4565 4112 78 na GCF_000269525.1 PRJNA224116 SAMN02463923 AKBY00000000.1 na 997880 817 Bacteroides fragilis CL05T00C42 strain=CL05T00C42 na latest Contig Major Full 2012-06-15 PB_Bact_frag_CL05T00C42_V1 Broad Institute GCA_000269525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/525/GCF_000269525.1_PB_Bact_frag_CL05T00C42_V1/ na na na haploid bacteria 5300647 5300647 43.500000 0 12 12 NCBI RefSeq GCF_000269525.1-RS_2024_10_25 2024-10-25 4430 4267 94 22829535 GCF_000269545.1 PRJNA224116 SAMN02463931 AKBZ00000000.1 na 997888 338188 Bacteroides finegoldii CL09T03C10 strain=CL09T03C10 na latest Contig Major Full 2012-06-15 PB_Bact_thet_CL09T03C10_V1 Broad Institute GCA_000269545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/545/GCF_000269545.1_PB_Bact_thet_CL09T03C10_V1/ na na na haploid bacteria 5124109 5124109 42.500000 0 16 16 NCBI RefSeq GCF_000269545.1-RS_2025_01_08 2025-01-08 4238 4046 93 22829535 GCF_000269565.1 PRJNA224116 SAMN02463702 AKCB00000000.1 reference genome 100884 100884 Coprobacillus cateniformis strain=D6 na latest Contig Major Full 2012-06-15 PB_Copr_sp_D6_V1 Broad Institute GCA_000269565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/565/GCF_000269565.1_PB_Copr_sp_D6_V1/ na na na haploid bacteria 3861289 3861289 31.500000 0 9 9 NCBI RefSeq GCF_000269565.1-RS_2026_03_12 2026-03-12 3904 3787 87 22829535 GCF_000269585.1 PRJNA224116 SAMN02463897 AKCF00000000.1 na 883123 571 Klebsiella oxytoca 10-5248 strain=10-5248 na latest Contig Major Full 2012-06-15 PB_Kleb_oxyt_10-5248_V1 Broad Institute GCA_000269585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/585/GCF_000269585.1_PB_Kleb_oxyt_10-5248_V1/ na na na haploid bacteria 6029795 6029795 55.000000 0 4 4 NCBI RefSeq GCF_000269585.1-RS_2025_12_22 2025-12-22 5730 5492 114 22829535 GCF_000269605.1 PRJNA224116 SAMN02463874 AKCI00000000.1 na 857290 230143 Scardovia wiggsiae F0424 strain=F0424 na latest Contig Major Full 2012-06-15 PB_Scar_wigg_F0424_V1 Broad Institute GCA_000269605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/605/GCF_000269605.1_PB_Scar_wigg_F0424_V1/ na na na haploid bacteria 1550817 1550817 53.000000 0 1 1 NCBI RefSeq GCF_000269605.1-RS_2026_01_15 2026-01-15 1285 1215 55 22829535 GCF_000269625.1 PRJNA224116 SAMN02596919 AKBU00000000.1 na 272943 1063 Cereibacter sphaeroides 2.4.1 strain=2.4.1 na latest Chromosome Major Full 2012-06-15 PB_Rhod_Spha_2_4_1_V1 Broad Institute GCA_000269625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/625/GCF_000269625.1_PB_Rhod_Spha_2_4_1_V1/ na assembly from type material na haploid bacteria 4606604 4606604 69.000000 8 11 11 NCBI RefSeq GCF_000269625.1-RS_2025_12_07 2025-12-07 4472 4327 65 22829535 GCF_000269685.1 PRJNA224116 SAMN02471141 AKGC00000000.1 na 1185421 1290 Staphylococcus hominis subsp. hominis ZBW5 strain=ZBW5 na latest Contig Major Full 2012-06-17 Stahom1.0 The First Affiliated Hospital, School of Medicine, Zhejiang University GCA_000269685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/685/GCF_000269685.1_Stahom1.0/ na na na haploid bacteria 2335704 2335704 31.500000 0 47 47 NCBI RefSeq GCF_000269685.1-RS_2026_03_20 2026-03-20 2390 2278 49 22887665 GCF_000269705.1 PRJNA224116 SAMN02470077 AKFO00000000.1 na 1181234 1363 Lactococcus garvieae IPLA 31405 strain=IPLA 31405 na latest Contig Major Full 2012-06-17 ASM26970v1 Era7 Bioinformatics GCA_000269705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/705/GCF_000269705.1_ASM26970v1/ na na na haploid bacteria 2052312 2052312 38.500000 0 23 23 NCBI RefSeq GCF_000269705.1-RS_2026_02_06 2026-02-06 2082 1993 53 22933752 GCF_000269725.1 PRJNA224116 SAMN00216032 AFSW00000000.1 na 766729 672 Vibrio vulnificus JY1305 strain=JY1305 na latest Contig Major Full 2012-06-18 ASM26972v1 University of North Carolina at Charlotte GCA_000269725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/725/GCF_000269725.1_ASM26972v1/ na na na haploid bacteria 4950327 4950327 46.500000 0 153 153 NCBI RefSeq GCF_000269725.1-RS_2026_05_03 2026-05-03 4537 4228 179 22662170 GCF_000269805.1 PRJNA224116 SAMN02469892 AKIO00000000.1 reference genome 1167628 461393 Actinomyces massiliensis 4401292 strain=4401292 na latest Scaffold Major Full 2012-06-18 ASM26980v1 URMITE GCA_000269805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/805/GCF_000269805.1_ASM26980v1/ na assembly from type material na haploid bacteria 3371034 3348548 68.000000 0 13 35 NCBI RefSeq GCF_000269805.1-RS_2026_03_28 2026-03-28 2840 2755 55 22933754 GCF_000269845.1 PRJNA224116 SAMN02470079 AKII00000000.1 na 1193128 78258 Parascardovia denticolens IPLA 20019 strain=IPLA 20019 na latest Contig Major Full 2012-06-18 ASM26984v1 IPLA-CSIC GCA_000269845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/845/GCF_000269845.1_ASM26984v1/ na na na haploid bacteria 2003311 2003311 58.500000 0 38 38 NCBI RefSeq GCF_000269845.1-RS_2026_03_20 2026-03-20 1749 1650 71 22887674 GCF_000269865.1 PRJNA224116 SAMN02471793 AKKV00000000.1 reference genome 1196324 245160 Fictibacillus macauensis ZFHKF-1 strain=ZFHKF-1 na latest Contig Major Full 2012-06-18 ASM26986v1 The University of Hong Kong GCA_000269865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/865/GCF_000269865.1_ASM26986v1/ na assembly from type material na haploid bacteria 3736359 3736359 40.500000 0 55 55 NCBI RefSeq GCF_000269865.1-RS_2026_05_13 2026-05-13 3972 3856 58 22887677 GCF_000269905.1 PRJNA224116 SAMN02470881 AKIF00000000.1 na 1193119 94136 Alkalibacillus haloalkaliphilus C5 strain=C5 na latest Contig Major Full 2012-06-18 ASM26990v1 Anand Agricultural University GCA_000269905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/905/GCF_000269905.1_ASM26990v1/ na na na haploid bacteria 2908057 2908057 37.000000 0 325 325 NCBI RefSeq GCF_000269905.1-RS_2026_04_15 2026-04-15 3318 3057 57 22887673 GCF_000269925.1 PRJNA224116 SAMD00060911 na na 420889 1363 Lactococcus garvieae ATCC 49156 strain=ATCC 49156 na latest Complete Genome Major Full 2011-08-09 ASM26992v1 Kitasato Institute for Life Sciences GCA_000269925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/925/GCF_000269925.1_ASM26992v1/ na assembly from heterotypic synonym type material na haploid bacteria 1950135 1950135 39.000000 1 1 1 NCBI RefSeq GCF_000269925.1-RS_2026_03_31 2026-03-31 1999 1874 81 21829716 GCF_000269945.1 PRJNA224116 SAMD00060912 na na 420890 1363 Lactococcus garvieae Lg2 strain=Lg2 na latest Complete Genome Major Full 2011-08-09 ASM26994v1 Kitasato Institute for Life Sciences GCA_000269945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/945/GCF_000269945.1_ASM26994v1/ na na na haploid bacteria 1963964 1963964 39.000000 1 1 1 NCBI RefSeq GCF_000269945.1-RS_2026_03_31 2026-03-31 2016 1883 81 21829716 GCF_000269965.1 PRJNA224116 SAMD00060952 na na 391904 216816 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 strain=JCM 1222 na latest Complete Genome Major Full 2011-01-28 ASM26996v1 University of Tokyo, Graduate School of Frontier Sciences GCA_000269965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/965/GCF_000269965.1_ASM26996v1/ na assembly from type material na haploid bacteria 2828958 2828958 60.000000 1 1 1 NCBI RefSeq GCF_000269965.1-RS_2026_07_01 2026-07-01 2665 2455 100 21270894 GCF_000269985.1 PRJNA224116 SAMD00060928 na reference genome 452652 2066 Kitasatospora setae KM-6054 strain=KM-6054 na latest Complete Genome Major Full 2010-11-11 ASM26998v1 NITE GCA_000269985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/269/985/GCF_000269985.1_ASM26998v1/ na assembly from type material na haploid bacteria 8783278 8783278 74.000000 1 1 1 NCBI RefSeq GCF_000269985.1-RS_2025_12_11 2025-12-11 7707 7478 108 21059706 GCF_000270005.1 PRJNA224116 SAMD00060971 na na 866344 210 Helicobacter pylori F16 strain=F16 na latest Complete Genome Major Full 2011-01-07 ASM27000v1 The University of Tokyo GCA_000270005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/005/GCF_000270005.1_ASM27000v1/ na na na haploid bacteria 1575399 1575399 39.000000 1 1 1 NCBI RefSeq GCF_000270005.1-RS_2026_02_10 2026-02-10 1527 1385 45 21212362;21575176 GCF_000270025.1 PRJNA224116 SAMD00060972 na na 866345 210 Helicobacter pylori F30 strain=F30 na latest Complete Genome Major Full 2011-01-07 ASM27002v1 The University of Tokyo GCA_000270025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/025/GCF_000270025.1_ASM27002v1/ na na na haploid bacteria 1579693 1579693 39.000000 2 2 2 NCBI RefSeq GCF_000270025.1-RS_2026_02_10 2026-02-10 1531 1410 45 21212362;21575176 GCF_000270045.1 PRJNA224116 SAMD00060973 na na 102608 210 Helicobacter pylori F32 strain=F32 na latest Complete Genome Major Full 2011-01-07 ASM27004v1 The University of Tokyo GCA_000270045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/045/GCF_000270045.1_ASM27004v1/ na na na haploid bacteria 1581461 1581461 39.000000 2 2 2 NCBI RefSeq GCF_000270045.1-RS_2026_02_16 2026-02-16 1538 1424 45 21212362;21575176 GCF_000270065.1 PRJNA224116 SAMD00060974 na na 866346 210 Helicobacter pylori F57 strain=F57 na latest Complete Genome Major Full 2011-01-07 ASM27006v1 The University of Tokyo GCA_000270065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/065/GCF_000270065.1_ASM27006v1/ na na na haploid bacteria 1609006 1609006 38.500000 1 1 1 NCBI RefSeq GCF_000270065.1-RS_2026_02_16 2026-02-16 1553 1418 45 21212362;21575176 GCF_000270085.1 PRJNA224116 SAMD00060966 na reference genome 650150 1648 Erysipelothrix rhusiopathiae str. Fujisawa strain=Fujisawa na latest Complete Genome Major Full 2011-05-30 ASM27008v1 National Institute of Animal Health (Japan) GCA_000270085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/085/GCF_000270085.1_ASM27008v1/ na na na haploid bacteria 1787941 1787941 36.500000 1 1 1 NCBI RefSeq GCF_000270085.1-RS_2026_06_16 2026-06-16 1760 1674 80 21478354 GCF_000270105.1 PRJNA224116 SAMD00060976 na na 536056 562 Escherichia coli DH1 strain=DH1 na latest Complete Genome Major Full 2010-12-16 ASM27010v1 Symbiotic Network Design Laboratory, Graduate School of Information Science and Technology, Osaka University GCA_000270105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/105/GCF_000270105.1_ASM27010v1/ na na na haploid bacteria 4621430 4621430 51.000000 1 1 1 NCBI RefSeq GCF_000270105.1-RS_2025_05_23 2025-05-23 4491 4174 118 21611185 GCF_000270125.2 PRJNA224116 SAMD00060978 na na 932677 553 Pantoea ananatis AJ13355 strain=AJ13355 na latest Complete Genome Minor Full 2016-02-10 ASM27012v2 Ajinomoto Co.,Inc GCA_000270125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/125/GCF_000270125.2_ASM27012v2/ na na na haploid bacteria 4877279 4877279 53.500000 2 2 2 NCBI RefSeq GCF_000270125.2-RS_2026_02_11 2026-02-11 4524 4274 116 na GCF_000270145.1 PRJNA224116 SAMD00060983 na na 981539 315405 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 strain=ATCC 43143 na latest Complete Genome Major Full 2011-05-28 ASM27014v1 Yang-Ming Genome Sequencing Center, National Yang-Ming University GCA_000270145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/145/GCF_000270145.1_ASM27014v1/ na na na haploid bacteria 2362241 2362241 37.500000 1 1 1 NCBI RefSeq GCF_000270145.1-RS_2026_04_01 2026-04-01 2357 2239 79 21633709 GCF_000270165.1 PRJNA224116 SAMD00060984 na na 981540 197614 Streptococcus pasteurianus ATCC 43144 strain=ATCC 43144 na latest Complete Genome Major Full 2011-05-28 ASM27016v1 Yang-Ming Genome Sequencing Center, National Yang-Ming University GCA_000270165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/165/GCF_000270165.1_ASM27016v1/ na na na haploid bacteria 2100077 2100077 37.500000 1 1 1 NCBI RefSeq GCF_000270165.1-RS_2026_04_01 2026-04-01 2119 1933 79 21633709 GCF_000270185.1 PRJNA224116 SAMD00060979 na na 940190 33970 Melissococcus plutonius ATCC 35311 strain=ATCC 35311 na latest Chromosome Major Full 2011-05-09 ASM27018v1 National Center for Global Health and Medicine GCA_000270185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/185/GCF_000270185.1_ASM27018v1/ na assembly from type material na haploid bacteria 2068732 2068712 31.000000 2 2 3 NCBI RefSeq GCF_000270185.1-RS_2026_02_10 2026-02-10 1890 1674 77 21622755 GCF_000270205.1 PRJNA224116 SAMD00060989 na na 1029718 49118 Candidatus Arthromitus sp. SFB-mouse-Japan na mouse isolate latest Complete Genome Major Full 2011-08-02 ASM27020v1 Frontier Science Research Center, University of Miyazaki GCA_000270205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/205/GCF_000270205.1_ASM27020v1/ na na na haploid bacteria 1620005 1620005 28.500000 1 1 1 NCBI RefSeq GCF_000270205.1-RS_2025_08_03 2025-08-03 1593 1515 61 21791478 GCF_000270225.1 PRJNA224116 SAMD00060990 na na 1030843 837 Porphyromonas gingivalis TDC60 strain=TDC60 na latest Complete Genome Major Full 2011-05-23 ASM27022v1 Tokyo Medical and Dental University GCA_000270225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/225/GCF_000270225.1_ASM27022v1/ na na na haploid bacteria 2339898 2339898 48.500000 1 1 1 NCBI RefSeq GCF_000270225.1-RS_2025_12_03 2025-12-03 2061 1939 67 21705612 GCF_000270245.1 PRJNA224116 SAMD00061117 na reference genome 1032480 29405 Microlunatus phosphovorus NM-1 strain=NM-1 na latest Complete Genome Major Full 2011-06-01 ASM27024v1 National Institute of Technology and Evaluation GCA_000270245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/245/GCF_000270245.1_ASM27024v1/ na assembly from type material na haploid bacteria 5683123 5683123 67.500000 1 1 1 NCBI RefSeq GCF_000270245.1-RS_2025_12_11 2025-12-11 5229 5117 52 na GCF_000270285.1 PRJNA224116 SAMD00060993 na na 502558 502558 Eggerthella sp. YY7918 strain=YY7918 na latest Complete Genome Major Full 2011-06-30 ASM27028v1 Gifu University, United Graduate School of Agricultural Science GCA_000270285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/285/GCF_000270285.1_ASM27028v1/ na na na haploid bacteria 3123671 3123671 56.000000 1 1 1 NCBI RefSeq GCF_000270285.1-RS_2024_08_13 2024-08-13 2660 2586 59 21914883 GCF_000270305.1 PRJNA224116 SAMD00060994 na na 1042156 1042156 Clostridium sp. SY8519 strain=SY8519 na latest Complete Genome Major Full 2011-06-30 ASM27030v1 Gifu University, United Graduate School of Agricultural Science GCA_000270305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/305/GCF_000270305.1_ASM27030v1/ na na na haploid bacteria 2835737 2835737 50.500000 1 1 1 NCBI RefSeq GCF_000270305.1-RS_2024_05_28 2024-05-28 2598 2505 69 21914882 GCF_000270365.1 PRJNA224116 SAMN02603011 na na 443150 1773 Mycobacterium tuberculosis CCDC5180 strain=CCDC5180 na latest Complete Genome Major Full 2011-07-05 ASM27036v1 Beijing Genomics institute and National Institue for Communicable Disease Control and Prevetion GCA_000270365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/365/GCF_000270365.1_ASM27036v1/ na na na haploid bacteria 4405981 4405981 65.500000 1 1 1 NCBI RefSeq GCF_000270365.1-RS_2025_06_28 2025-06-28 4164 3854 51 21914894 GCF_000270385.1 PRJNA224116 SAMN02603519 na na 1112250 83554 Chlamydia psittaci C19/98 strain=C19/98 na latest Complete Genome Major Full 2011-06-02 ASM27038v1 Leibniz Institute for Natural Product Research and Infection Biology GCA_000270385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/385/GCF_000270385.1_ASM27038v1/ na na na haploid bacteria 1169374 1169374 39.000000 1 1 1 NCBI RefSeq GCF_000270385.1-RS_2026_03_20 2026-03-20 1027 973 44 21705611 GCF_000270405.1 PRJNA224116 SAMN02603517 na na 1112252 83554 Chlamydia psittaci 01DC11 strain=01DC11 na latest Complete Genome Major Full 2011-06-02 ASM27040v1 Leibniz Institute for Natural Product Research and Infection Biology GCA_000270405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/405/GCF_000270405.1_ASM27040v1/ na na na haploid bacteria 1172197 1172197 39.000000 1 1 1 NCBI RefSeq GCF_000270405.1-RS_2026_03_20 2026-03-20 1027 971 44 21705611 GCF_000270425.1 PRJNA224116 SAMN02603518 na na 1112254 83554 Chlamydia psittaci 02DC15 strain=02DC15 na latest Complete Genome Major Full 2011-06-02 ASM27042v1 Leibniz Institute for Natural Product Research and Infection Biology GCA_000270425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/425/GCF_000270425.1_ASM27042v1/ na na na haploid bacteria 1172182 1172182 39.000000 1 1 1 NCBI RefSeq GCF_000270425.1-RS_2026_03_20 2026-03-20 1031 979 44 21705611 GCF_000270445.1 PRJNA224116 SAMN02603520 na na 1112267 83554 Chlamydia psittaci 08DC60 strain=08DC60 na latest Complete Genome Major Full 2011-06-02 ASM27044v1 Leibniz Institute for Natural Product Research and Infection Biology GCA_000270445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/445/GCF_000270445.1_ASM27044v1/ na na na haploid bacteria 1172032 1172032 39.000000 1 1 1 NCBI RefSeq GCF_000270445.1-RS_2026_03_20 2026-03-20 1028 970 44 21705611 GCF_000270465.1 PRJNA224116 SAMEA2272235 na na 1034809 28035 Staphylococcus lugdunensis N920143 strain=N920143 na latest Complete Genome Major Full 2011-07-13 ASM27046v1 Wellcome Trust Sanger Insititute GCA_000270465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/465/GCF_000270465.1_ASM27046v1/ na na na haploid bacteria 2595888 2595888 34.000000 1 1 1 NCBI RefSeq GCF_000270465.1-RS_2026_02_06 2026-02-06 2498 2381 73 21682763 GCF_000270525.1 PRJNA224116 SAMN02603874 na na 767465 28903 Mycoplasmopsis bovis HB0801 strain=HB0801 na latest Complete Genome Major Full 2012-06-19 ASM27052v1 State Key Laboratory of Agricultural Microbiology(AML) GCA_000270525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/525/GCF_000270525.1_ASM27052v1/ na na na haploid bacteria 991702 991702 29.500000 1 1 1 NCBI RefSeq GCF_000270525.1-RS_2026_02_26 2026-02-26 860 776 43 22693604 GCF_000270565.1 PRJNA224116 SAMN00728496 AKVB00000000.1 na 1001720 36809 Mycobacteroides abscessus 3A-0930-R strain=3A-0930-R na latest Contig Major Full 2012-06-19 ASM27056v1 Institute for Genome Sciences GCA_000270565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/565/GCF_000270565.1_ASM27056v1/ na na na haploid bacteria 5273535 5273535 64.000000 0 13 13 NCBI RefSeq GCF_000270565.1-RS_2026_06_24 2026-06-24 5333 5210 53 na GCF_000270585.1 PRJNA224116 SAMN00672648 AKUZ00000000.1 na 1001716 36809 Mycobacteroides abscessus 3A-0122-S strain=3A-0122-S na latest Contig Major Full 2012-06-19 ASM27058v1 Institute for Genome Sciences GCA_000270585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/585/GCF_000270585.1_ASM27058v1/ na na na haploid bacteria 5233665 5233665 64.000000 0 18 18 NCBI RefSeq GCF_000270585.1-RS_2026_04_26 2026-04-26 5264 5156 53 na GCF_000270605.1 PRJNA224116 SAMN00717269 AKUS00000000.1 na 1001737 36809 Mycobacteroides abscessus 6G-0728-R strain=6G-0728-R na latest Contig Major Full 2012-06-19 ASM27060v1 Institute for Genome Sciences GCA_000270605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/605/GCF_000270605.1_ASM27060v1/ na na na haploid bacteria 5341825 5341825 64.000000 0 8 8 NCBI RefSeq GCF_000270605.1-RS_2025_04_18 2025-04-18 5387 5263 81 na GCF_000270625.1 PRJNA224116 SAMN00728579 AKVE00000000.1 na 1001724 36809 Mycobacteroides abscessus 4S-0116-S strain=4S-0116-S na latest Contig Major Full 2012-06-19 ASM27062v1 Institute for Genome Sciences GCA_000270625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/625/GCF_000270625.1_ASM27062v1/ na na na haploid bacteria 4841923 4841923 64.000000 0 7 7 NCBI RefSeq GCF_000270625.1-RS_2026_06_22 2026-06-22 4808 4695 54 na GCF_000270645.1 PRJNA224116 SAMN00672657 AKUR00000000.1 na 1001739 36809 Mycobacteroides abscessus 6G-0212 strain=6G-0212 na latest Contig Major Full 2012-06-19 ASM27064v1 Institute for Genome Sciences GCA_000270645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/645/GCF_000270645.1_ASM27064v1/ na na na haploid bacteria 5144692 5144692 64.000000 0 13 13 NCBI RefSeq GCF_000270645.1-RS_2026_04_18 2026-04-18 5128 5029 53 na GCF_000270665.1 PRJNA224116 SAMN00672674 AKVF00000000.1 na 1001714 36809 Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 strain=CCUG48898 na latest Contig Major Full 2012-06-19 ASM27066v1 Institute for Genome Sciences GCA_000270665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/665/GCF_000270665.1_ASM27066v1/ na assembly from type material na haploid bacteria 5195205 5195205 64.000000 0 5 5 NCBI RefSeq GCF_000270665.1-RS_2026_01_27 2026-01-27 5140 5027 55 22965080 GCF_000270685.2 PRJNA224116 SAMN00728552 AKVD00000000.1 na 1001725 36809 Mycobacteroides abscessus 4S-0116-R strain=4S-0116-R na latest Contig Minor Full 2012-06-19 ASM27068v2 Institute for Genome Sciences GCA_000270685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/685/GCF_000270685.2_ASM27068v2/ na na na haploid bacteria 4839534 4839534 64.000000 0 5 5 NCBI RefSeq GCF_000270685.2-RS_2026_06_22 2026-06-22 4805 4694 54 na GCF_000270705.1 PRJNA224116 SAMN00672649 AKVA00000000.1 na 1001718 36809 Mycobacteroides abscessus 3A-0731 strain=3A-0731 na latest Contig Major Full 2012-06-19 ASM27070v1 Institute for Genome Sciences GCA_000270705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/705/GCF_000270705.1_ASM27070v1/ na na na haploid bacteria 5386957 5386957 64.000000 0 12 12 NCBI RefSeq GCF_000270705.1-RS_2025_04_18 2025-04-18 5428 5323 53 na GCF_000270725.1 PRJNA224116 SAMN00672652 AKVC00000000.1 na 1001719 36809 Mycobacteroides abscessus 3A-0930-S strain=3A-0930-S na latest Contig Major Full 2012-06-19 ASM27072v1 Institute for Genome Sciences GCA_000270725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/725/GCF_000270725.1_ASM27072v1/ na na na haploid bacteria 5249987 5249987 64.000000 0 12 12 NCBI RefSeq GCF_000270725.1-RS_2026_06_22 2026-06-22 5313 5204 53 na GCF_000270745.2 PRJNA224116 SAMN00728580 AKUT00000000.1 na 1001723 36809 Mycobacteroides abscessus 4S-0206 strain=4S-0206 na latest Contig Minor Full 2012-06-19 ASM27074v2 Institute for Genome Sciences GCA_000270745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/745/GCF_000270745.2_ASM27074v2/ na na na haploid bacteria 4849390 4849390 64.000000 0 10 10 NCBI RefSeq GCF_000270745.2-RS_2026_06_23 2026-06-23 4819 4706 51 na GCF_000270765.1 PRJNA224116 SAMN00672641 AKUU00000000.1 na 1001713 36809 Mycobacteroides abscessus subsp. bolletii 2B-0307 strain=2B-0307 na latest Contig Major Full 2012-06-19 ASM27076v1 Institute for Genome Sciences GCA_000270765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/765/GCF_000270765.1_ASM27076v1/ na na na haploid bacteria 4809972 4809972 64.000000 0 9 9 NCBI RefSeq GCF_000270765.1-RS_2025_04_18 2025-04-18 4779 4672 52 na GCF_000270785.1 PRJNA224116 SAMN00715106 AKUW00000000.1 na 1001712 36809 Mycobacteroides abscessus subsp. bolletii 2B-0912-S strain=2B-0912-S na latest Contig Major Full 2012-06-19 ASM27078v1 Institute for Genome Sciences GCA_000270785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/785/GCF_000270785.1_ASM27078v1/ na na na haploid bacteria 4809311 4809311 64.000000 0 12 12 NCBI RefSeq GCF_000270785.1-RS_2025_04_18 2025-04-18 4781 4675 52 na GCF_000270805.1 PRJNA224116 SAMN00672643 AKUV00000000.1 na 1001711 36809 Mycobacteroides abscessus subsp. bolletii 2B-0912-R strain=2B-0912-R na latest Contig Major Full 2012-06-19 ASM27080v1 Institute for Genome Sciences GCA_000270805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/805/GCF_000270805.1_ASM27080v1/ na na na haploid bacteria 4809994 4809994 64.000000 0 9 9 NCBI RefSeq GCF_000270805.1-RS_2025_04_18 2025-04-18 4778 4674 52 na GCF_000270825.1 PRJNA224116 SAMN00728494 AKUX00000000.1 na 1001721 36809 Mycobacteroides abscessus 3A-0119-R strain=3A-0119-R na latest Contig Major Full 2012-06-19 ASM27082v1 Institute for Genome Sciences GCA_000270825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/825/GCF_000270825.1_ASM27082v1/ na na na haploid bacteria 5281259 5281259 64.000000 0 13 13 NCBI RefSeq GCF_000270825.1-RS_2026_06_23 2026-06-23 5334 5214 52 na GCF_000270845.1 PRJNA224116 SAMN00715826 AKUY00000000.1 na 1001715 36809 Mycobacteroides abscessus 3A-0122-R strain=3A-0122-R na latest Contig Major Full 2012-06-19 ASM27084v1 Institute for Genome Sciences GCA_000270845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/845/GCF_000270845.1_ASM27084v1/ na na na haploid bacteria 5231383 5231383 64.000000 0 33 33 NCBI RefSeq GCF_000270845.1-RS_2026_07_02 2026-07-02 5272 5159 53 na GCF_000270865.1 PRJNA224116 SAMN00672659 AKUF00000000.1 na 1001741 36809 Mycobacteroides abscessus 6G-0125-S strain=6G-0125-S na latest Contig Major Full 2012-06-19 ASM27086v1 Institute for Genome Sciences GCA_000270865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/865/GCF_000270865.1_ASM27086v1/ na na na haploid bacteria 5328817 5328817 64.000000 0 8 8 NCBI RefSeq GCF_000270865.1-RS_2025_04_18 2025-04-18 5378 5249 81 na GCF_000270885.1 PRJNA224116 SAMN00714442 AKUK00000000.1 na 1001706 36809 Mycobacteroides abscessus subsp. bolletii 1S-153-0915 strain=1S-153-0915 na latest Contig Major Full 2012-06-19 ASM27088v1 Institute for Genome Sciences GCA_000270885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/885/GCF_000270885.1_ASM27088v1/ na na na haploid bacteria 4894488 4894488 64.000000 0 13 13 NCBI RefSeq GCF_000270885.1-RS_2026_04_27 2026-04-27 4879 4771 53 na GCF_000270905.1 PRJNA224116 SAMN00672642 AKUM00000000.1 na 1001708 36809 Mycobacteroides abscessus subsp. bolletii 2B-0626 strain=2B-0626 na latest Contig Major Full 2012-06-19 ASM27090v1 Institute for Genome Sciences GCA_000270905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/905/GCF_000270905.1_ASM27090v1/ na na na haploid bacteria 4810868 4810868 64.000000 0 6 6 NCBI RefSeq GCF_000270905.1-RS_2025_04_18 2025-04-18 4775 4677 52 na GCF_000270925.1 PRJNA224116 SAMN00672644 AKUO00000000.1 na 1001709 36809 Mycobacteroides abscessus subsp. bolletii 2B-1231 strain=2B-1231 na latest Contig Major Full 2012-06-19 ASM27092v1 Institute for Genome Sciences GCA_000270925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/925/GCF_000270925.1_ASM27092v1/ na na na haploid bacteria 4811264 4811264 64.000000 0 9 9 NCBI RefSeq GCF_000270925.1-RS_2025_04_18 2025-04-18 4781 4681 52 na GCF_000270945.1 PRJNA224116 SAMN00714551 AKUN00000000.1 na 1001710 36809 Mycobacteroides abscessus subsp. bolletii 2B-0107 strain=2B-0107 na latest Contig Major Full 2012-06-19 ASM27094v1 Institute for Genome Sciences GCA_000270945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/945/GCF_000270945.1_ASM27094v1/ na na na haploid bacteria 4811369 4811369 64.000000 0 7 7 NCBI RefSeq GCF_000270945.1-RS_2025_04_18 2025-04-18 4780 4679 52 24565502 GCF_000270965.1 PRJNA224116 SAMN00672660 AKUQ00000000.1 na 1001732 36809 Mycobacteroides abscessus 5S-0921 strain=5S-0921 na latest Contig Major Full 2012-06-19 ASM27096v1 Institute for Genome Sciences GCA_000270965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/965/GCF_000270965.1_ASM27096v1/ na na na haploid bacteria 5254648 5254648 64.000000 0 12 12 NCBI RefSeq GCF_000270965.1-RS_2026_06_29 2026-06-29 5315 5156 87 na GCF_000270985.1 PRJNA224116 SAMN00672655 AKUE00000000.1 na 1001740 36809 Mycobacteroides abscessus 6G-0125-R strain=6G-0125-R na latest Contig Major Full 2012-06-19 ASM27098v1 Institute for Genome Sciences GCA_000270985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/985/GCF_000270985.1_ASM27098v1/ na na na haploid bacteria 5139423 5139423 64.000000 0 5 5 NCBI RefSeq GCF_000270985.1-RS_2026_04_18 2026-04-18 5119 5022 53 na GCF_000271005.1 PRJNA224116 SAMN00672654 AKUB00000000.1 na 1001735 36809 Mycobacteroides abscessus 5S-0817 strain=5S-0817 na latest Contig Major Full 2012-06-19 ASM27100v1 Institute for Genome Sciences GCA_000271005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/005/GCF_000271005.1_ASM27100v1/ na na na haploid bacteria 5248885 5248885 64.000000 0 12 12 NCBI RefSeq GCF_000271005.1-RS_2026_06_24 2026-06-24 5309 5155 87 24565502 GCF_000271025.1 PRJNA224116 SAMN00672656 AKUC00000000.1 na 1001733 36809 Mycobacteroides abscessus 5S-1212 strain=5S-1212 na latest Contig Major Full 2012-06-19 ASM27102v1 Institute for Genome Sciences GCA_000271025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/025/GCF_000271025.1_ASM27102v1/ na na na haploid bacteria 5239840 5239840 64.000000 0 7 7 NCBI RefSeq GCF_000271025.1-RS_2026_06_14 2026-06-14 5295 5138 87 na GCF_000271045.1 PRJNA224116 SAMN00672658 AKUD00000000.1 na 1001734 36809 Mycobacteroides abscessus 5S-1215 strain=5S-1215 na latest Contig Major Full 2012-06-19 ASM27104v1 Institute for Genome Sciences GCA_000271045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/045/GCF_000271045.1_ASM27104v1/ na na na haploid bacteria 5206300 5206300 64.000000 0 5 5 NCBI RefSeq GCF_000271045.1-RS_2025_04_18 2025-04-18 5261 5111 86 na GCF_000271065.1 PRJNA224116 SAMN00672653 AKTZ00000000.1 na 1001731 36809 Mycobacteroides abscessus 5S-0422 strain=5S-0422 na latest Contig Major Full 2012-06-19 ASM27106v1 Institute for Genome Sciences GCA_000271065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/065/GCF_000271065.1_ASM27106v1/ na na na haploid bacteria 5323965 5323965 64.000000 0 13 13 NCBI RefSeq GCF_000271065.1-RS_2025_04_15 2025-04-15 5388 5238 87 na GCF_000271085.1 PRJNA224116 SAMN00728603 AKUA00000000.1 na 1001730 36809 Mycobacteroides abscessus 5S-0708 strain=5S-0708 na latest Contig Major Full 2012-06-19 ASM27108v1 Institute for Genome Sciences GCA_000271085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/085/GCF_000271085.1_ASM27108v1/ na na na haploid bacteria 5253252 5253252 64.000000 0 6 6 NCBI RefSeq GCF_000271085.1-RS_2026_06_24 2026-06-24 5308 5159 87 na GCF_000271105.1 PRJNA224116 SAMN00672650 AKUP00000000.1 na 1001717 36809 Mycobacteroides abscessus 3A-0810-R strain=3A-0810-R na latest Contig Major Full 2012-06-19 ASM27110v1 Institute for Genome Sciences GCA_000271105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/105/GCF_000271105.1_ASM27110v1/ na na na haploid bacteria 5287644 5287644 64.000000 0 20 20 NCBI RefSeq GCF_000271105.1-RS_2026_06_23 2026-06-23 5351 5236 53 na GCF_000271125.1 PRJNA224116 SAMN00728581 AKTU00000000.1 na 1001722 36809 Mycobacteroides abscessus 4S-0303 strain=4S-0303 na latest Contig Major Full 2012-06-19 ASM27112v1 Institute for Genome Sciences GCA_000271125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/125/GCF_000271125.1_ASM27112v1/ na na na haploid bacteria 4864284 4864284 64.000000 0 8 8 NCBI RefSeq GCF_000271125.1-RS_2026_06_23 2026-06-23 4809 4699 51 na GCF_000271145.1 PRJNA224116 SAMN00672662 AKUH00000000.1 na 1001738 36809 Mycobacteroides abscessus 6G-1108 strain=6G-1108 na latest Contig Major Full 2012-06-19 ASM27114v1 Institute for Genome Sciences GCA_000271145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/145/GCF_000271145.1_ASM27114v1/ na na na haploid bacteria 5337035 5337035 64.000000 0 16 16 NCBI RefSeq GCF_000271145.1-RS_2025_04_18 2025-04-18 5391 5262 81 na GCF_000271165.1 PRJNA224116 SAMN02435974 AKUI00000000.1 na 1001704 36809 Mycobacteroides abscessus subsp. bolletii 1S-151-0930 strain=1S-151-0930 na latest Contig Major Full 2012-06-19 ASM27116v1 Institute for Genome Sciences GCA_000271165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/165/GCF_000271165.1_ASM27116v1/ na na na haploid bacteria 4895763 4895763 64.500000 0 6 6 NCBI RefSeq GCF_000271165.1-RS_2026_04_27 2026-04-27 4875 4766 53 24565502 GCF_000271185.1 PRJNA224116 SAMN00672661 AKUG00000000.1 na 1001736 36809 Mycobacteroides abscessus 6G-0728-S strain=6G-0728-S na latest Contig Major Full 2012-06-19 ASM27118v1 Institute for Genome Sciences GCA_000271185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/185/GCF_000271185.1_ASM27118v1/ na na na haploid bacteria 5315024 5315024 64.000000 0 6 6 NCBI RefSeq GCF_000271185.1-RS_2026_06_21 2026-06-21 5385 5264 81 na GCF_000271205.1 PRJNA224116 SAMN00728601 AKTX00000000.1 na 1001728 36809 Mycobacteroides abscessus 5S-0304 strain=5S-0304 na latest Contig Major Full 2012-06-19 ASM27120v1 Institute for Genome Sciences GCA_000271205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/205/GCF_000271205.1_ASM27120v1/ na na na haploid bacteria 5253081 5253081 64.000000 0 7 7 NCBI RefSeq GCF_000271205.1-RS_2026_06_22 2026-06-22 5307 5162 87 na GCF_000271225.1 PRJNA224116 SAMN00728602 AKTY00000000.1 na 1001729 36809 Mycobacteroides abscessus 5S-0421 strain=5S-0421 na latest Contig Major Full 2012-06-19 ASM27122v1 Institute for Genome Sciences GCA_000271225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/225/GCF_000271225.1_ASM27122v1/ na na na haploid bacteria 5242408 5242408 64.000000 0 6 6 NCBI RefSeq GCF_000271225.1-RS_2026_05_01 2026-05-01 5295 5148 87 na GCF_000271245.1 PRJNA224116 SAMN00728582 AKTV00000000.1 na 1001726 36809 Mycobacteroides abscessus 4S-0726-RA strain=4S-0726-RA na latest Contig Major Full 2012-06-19 ASM27124v1 Institute for Genome Sciences GCA_000271245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/245/GCF_000271245.1_ASM27124v1/ na na na haploid bacteria 4842208 4842208 64.000000 0 6 6 NCBI RefSeq GCF_000271245.1-RS_2026_06_24 2026-06-24 4807 4692 54 na GCF_000271265.1 PRJNA224116 SAMN00728583 AKTW00000000.1 na 1001727 36809 Mycobacteroides abscessus 4S-0726-RB strain=4S-0726-RB na latest Contig Major Full 2012-06-19 ASM27126v1 Institute for Genome Sciences GCA_000271265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/265/GCF_000271265.1_ASM27126v1/ na na na haploid bacteria 4862293 4862293 64.000000 0 6 6 NCBI RefSeq GCF_000271265.1-RS_2026_06_23 2026-06-23 4808 4696 51 na GCF_000271285.1 PRJNA224116 SAMN00672647 AKUJ00000000.1 na 1001705 36809 Mycobacteroides abscessus subsp. bolletii 1S-152-0914 strain=1S-152-0914 na latest Contig Major Full 2012-06-19 ASM27128v1 Institute for Genome Sciences GCA_000271285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/285/GCF_000271285.1_ASM27128v1/ na na na haploid bacteria 4897666 4897666 64.500000 0 2 2 NCBI RefSeq GCF_000271285.1-RS_2026_04_16 2026-04-16 4873 4769 53 na GCF_000271305.1 PRJNA224116 SAMN02469573 AKGD00000000.1 reference genome 1172194 243629 Hydrocarboniphaga effusa AP103 strain=AP103 na latest Contig Major Full 2012-06-17 ASM27130v1 Chonbuk National University GCA_000271305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/305/GCF_000271305.1_ASM27130v1/ na assembly from type material na haploid bacteria 5193926 5193926 65.000000 0 4 4 NCBI RefSeq GCF_000271305.1-RS_2025_07_15 2025-07-15 4625 4504 77 22933753 GCF_000271325.1 PRJNA224116 SAMD00060988 na na 1002809 76853 Solibacillus silvestris StLB046 strain=StLB046 na latest Complete Genome Major Full 2011-04-04 ASM27132v1 Department of Material and Environmental Chemistry Utsunomiya University GCA_000271325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/325/GCF_000271325.1_ASM27132v1/ na na na haploid bacteria 3984229 3984229 38.500000 2 2 2 NCBI RefSeq GCF_000271325.1-RS_2025_03_18 2025-03-18 4034 3858 137 22019407 GCF_000271365.1 PRJNA224116 SAMN02603895 na na 1093787 287 Pseudomonas aeruginosa DK2 strain=DK2 na latest Complete Genome Major Full 2012-06-20 ASM27136v1 Technical University of Denmark GCA_000271365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/365/GCF_000271365.1_ASM27136v1/ na na na haploid bacteria 6402658 6402658 66.500000 1 1 1 NCBI RefSeq GCF_000271365.1-RS_2025_01_30 2025-01-30 5996 5811 80 22672046 GCF_000271405.2 PRJNA224116 SAMN02604142 na na 768486 1354 Enterococcus hirae ATCC 9790 strain=ATCC 9790 na latest Complete Genome Major Full 2012-06-20 ASM27140v2 University of Bern GCA_000271405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/405/GCF_000271405.2_ASM27140v2/ na assembly from type material na haploid bacteria 2856440 2856440 37.000000 2 2 2 NCBI RefSeq GCF_000271405.2-RS_2026_03_28 2026-03-28 2755 2518 93 22933757 GCF_000271425.1 PRJNA224116 SAMN02471743 AKIQ00000000.1 na 1191460 52133 Acinetobacter venetianus RAG-1 = CIP 110063 strain=RAG-1 na latest Scaffold Major Full 2012-06-17 A. venetianus RAG-1 v. 1.0 University of Florence GCA_000271425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/425/GCF_000271425.1_A._venetianus_RAG-1_v._1.0/ na assembly from type material na haploid bacteria 3464338 3464326 39.000000 0 87 88 NCBI RefSeq GCF_000271425.1-RS_2025_12_03 2025-12-03 3343 3199 105 22887671 GCF_000271485.2 PRJNA224116 SAMN01057329 AKVN00000000.2 reference genome 1122947 365349 Pelosinus fermentans DSM 17108 strain=R7 na latest Contig Major Full 2016-05-23 Pelosinus fermentans DSM 17108_v1.1 ORNL GCA_000271485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/485/GCF_000271485.2_Pelosinus_fermentans_DSM_17108_v1.1/ na assembly from type material na haploid bacteria 5027115 5027115 40.000000 0 2 2 NCBI RefSeq GCF_000271485.2-RS_2026_03_31 2026-03-31 4722 4579 113 22933770 GCF_000271505.1 PRJNA224116 SAMN01057330 AKVJ00000000.1 na 1149862 365349 Pelosinus fermentans B4 strain=B4 na latest Contig Major Full 2012-06-20 Pelosinus.strB4_v1.0 ENIGMA GCA_000271505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/505/GCF_000271505.1_Pelosinus.strB4_v1.0/ na na na haploid bacteria 5040108 5040108 40.000000 0 76 76 NCBI RefSeq GCF_000271505.1-RS_2026_03_20 2026-03-20 4750 4630 82 22933770 GCF_000271545.1 PRJNA224116 SAMN01057331 AKVM00000000.1 na 1149860 365349 Pelosinus fermentans A11 strain=A11 na latest Contig Major Full 2012-06-20 Pelosinus.strA11_v1.0 ENIGMA GCA_000271545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/545/GCF_000271545.1_Pelosinus.strA11_v1.0/ na na na haploid bacteria 5063494 5063494 40.000000 0 134 134 NCBI RefSeq GCF_000271545.1-RS_2026_03_20 2026-03-20 4821 4693 80 22933770 GCF_000271585.1 PRJNA242547 SAMN02981287 AEJI00000000.1 reference genome 717944 5325 Trametes versicolor FP-101664 SS1 strain=FP-101664 SS1 na latest Scaffold Major Full 2012-06-22 Trametes versicolor v1.0 JGI GCA_000271585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/585/GCF_000271585.1_Trametes_versicolor_v1.0/ na na na haploid fungi 44794008 42885174 57.500000 0 283 977 JGI Annotation submitted by JGI 2022-04-18 14562 14292 268 22745431 GCF_000271605.1 PRJNA225512 SAMN02981288 AEJJ00000000.1 reference genome 694068 208960 Fomitiporia mediterranea MF3/22 strain=MF3/22 na latest Scaffold Major Full 2012-06-29 Fomme1 JGI GCA_000271605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/605/GCF_000271605.1_Fomme1/ na na na haploid fungi 63354419 56770801 41.000000 0 1412 3952 JGI Annotation submitted by JGI 2020-02-04 11411 11330 81 22745431 GCF_000271625.1 PRJNA245129 SAMN02981286 AEIT00000000.1 reference genome 741705 80637 Coniophora puteana RWD-64-598 SS2 strain=RWD-64-598 SS2 na latest Scaffold Major Full 2012-06-25 Conpu1 DOE Joint Genome Institute GCA_000271625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/625/GCF_000271625.1_Conpu1/ na na na haploid fungi 42968544 41864241 52.500000 0 210 692 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2024-01-02 13894 13756 137 22745431 GCF_000271645.1 PRJNA225529 SAMN02744056 AFVY00000000.1 reference genome 578456 5217 Tremella mesenterica DSM 1558 strain=Fries na latest Scaffold Major Full 2012-06-22 Treme1 DOE Joint Genome Institute GCA_000271645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/645/GCF_000271645.1_Treme1/ na na na haploid fungi 28639919 27987508 46.500000 0 45 484 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-02-05 8292 8291 0 22745431 GCF_000271665.2 PRJNA224116 SAMN00996448 na na 1192197 365349 Pelosinus fermentans JBW45 strain=JBW45 na latest Complete Genome Major Full 2015-03-02 ASM27166v2 Oak Ridge National Laboratory GCA_000271665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/665/GCF_000271665.2_ASM27166v2/ na na na haploid bacteria 5380816 5380816 39.500000 1 1 1 NCBI RefSeq GCF_000271665.2-RS_2025_03_11 2025-03-11 4888 4754 111 26404608 GCF_000271785.1 PRJNA224116 SAMN02261418 AKHZ00000000.1 na 754764 384 Rhizobium leguminosarum bv. trifolii WSM597 strain=WSM597 na latest Scaffold Major Full 2012-06-26 ASM27178v1 JGI GCA_000271785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/785/GCF_000271785.1_ASM27178v1/ na na na haploid bacteria 7634384 7629284 61.000000 0 2 53 NCBI RefSeq GCF_000271785.1-RS_2025_06_11 2025-06-11 7399 7088 54 na GCF_000271845.1 PRJNA224116 SAMN02256543 AJUK00000000.1 na 754762 384 Rhizobium leguminosarum bv. trifolii WSM2297 strain=WSM2297 na latest Scaffold Major Full 2012-06-28 ASM27184v1 DOE Joint Genome Institute GCA_000271845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/845/GCF_000271845.1_ASM27184v1/ na na na haploid bacteria 7999455 7996855 61.000000 0 4 30 NCBI RefSeq GCF_000271845.1-RS_2025_06_10 2025-06-10 7734 7397 57 na GCF_000271865.1 PRJNA224116 SAMN02603489 na na 1198676 1309 Streptococcus mutans GS-5 strain=GS-5 na latest Complete Genome Major Full 2012-06-25 ASM27186v1 KUMC GCA_000271865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/865/GCF_000271865.1_ASM27186v1/ na na na haploid bacteria 2027088 2027088 37.000000 1 1 1 NCBI RefSeq GCF_000271865.1-RS_2026_01_02 2026-01-02 1995 1802 84 22887682 GCF_000271885.2 PRJNA224116 SAMN05172397 na na 930778 28901 Salmonella enterica subsp. enterica serovar Newport str. Levine 1 strain=Levine 1 na latest Complete Genome Major Full 2016-12-06 ASM27188v2 FDA GCA_000271885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/885/GCF_000271885.2_ASM27188v2/ na na na haploid bacteria 4841916 4841916 52.000000 1 1 1 NCBI RefSeq GCF_000271885.2-RS_2025_03_23 2025-03-23 4745 4436 126 na GCF_000271905.2 PRJNA224116 SAMN05172398 na na 930779 28901 Salmonella enterica subsp. enterica serovar Newport str. Levine 15 strain=Levine 15 na latest Complete Genome Major Full 2016-12-06 ASM27190v2 FDA GCA_000271905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/905/GCF_000271905.2_ASM27190v2/ na na na haploid bacteria 4883715 4883715 52.000000 1 1 1 NCBI RefSeq GCF_000271905.2-RS_2025_03_23 2025-03-23 4796 4505 124 na GCF_000271925.1 PRJNA224116 SAMN00792225 AJZR00000000.1 na 1125721 712218 Capnocytophaga sp. oral taxon 412 str. F0487 strain=F0487 na latest Contig Major Full 2012-06-25 Coraltaxon412F0487v1.0 J. Craig Venter Institute GCA_000271925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/925/GCF_000271925.1_Coraltaxon412F0487v1.0/ na na na haploid bacteria 2590781 2590781 39.500000 0 62 62 NCBI RefSeq GCF_000271925.1-RS_2025_01_08 2025-01-08 2250 2156 63 na GCF_000271945.1 PRJNA224116 SAMN00792205 AJZS00000000.1 na 1125722 837 Porphyromonas gingivalis W50 strain=W50 na latest Contig Major Full 2012-06-25 PgingivalisW50v1.0 J. Craig Venter Institute GCA_000271945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/945/GCF_000271945.1_PgingivalisW50v1.0/ na na na haploid bacteria 2242062 2242062 48.500000 0 104 104 NCBI RefSeq GCF_000271945.1-RS_2025_12_14 2025-12-14 2046 1901 53 na GCF_000271965.2 PRJNA224116 SAMN02470955 na na 1193499 303 Pseudomonas putida SJTE-1 strain=SJTE-1 na latest Complete Genome Major Full 2016-06-02 ASM27196v2 Shanghai Jiao Tong University GCA_000271965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/965/GCF_000271965.2_ASM27196v2/ na na na haploid bacteria 6077201 6077201 62.000000 1 1 1 NCBI RefSeq GCF_000271965.2-RS_2025_03_23 2025-03-23 5558 5372 96 22887678 GCF_000271985.2 PRJNA224116 SAMN02470939 na na 1193501 287 Pseudomonas aeruginosa SJTD-1 strain=SJTD-1 na latest Complete Genome Major Full 2016-06-02 ASM27198v2 Shanghai Jiao Tong University GCA_000271985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/271/985/GCF_000271985.2_ASM27198v2/ na na na haploid bacteria 6243825 6243825 66.500000 1 1 1 NCBI RefSeq GCF_000271985.2-RS_2025_03_23 2025-03-23 5761 5641 79 22887679 GCF_000272005.1 PRJNA224116 SAMN02470206 AKKU00000000.1 reference genome 1195246 553384 Alishewanella agri BL06 strain=BL06 na latest Contig Major Full 2012-06-25 ASM27200v1 Department of Environmental Science and Ecological Engineering, Korea University GCA_000272005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/005/GCF_000272005.1_ASM27200v1/ na assembly from type material na haploid bacteria 3491709 3491709 50.500000 0 30 30 NCBI RefSeq GCF_000272005.1-RS_2026_03_20 2026-03-20 3244 3150 73 22933763 GCF_000272025.2 PRJNA224116 SAMN02471424 AKCV00000000.2 na 3058603 3058603 Imbroritus primus strain=PBA na latest Contig Major Full 2019-06-03 PBA_v2 Universiti Teknologi Malaysia GCA_000272025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/025/GCF_000272025.2_PBA_v2/ na na na haploid bacteria 3817596 3817596 63.500000 0 26 26 NCBI RefSeq GCF_000272025.2-RS_2025_08_18 2025-08-18 3545 3470 44 na GCF_000272045.2 PRJNA224116 SAMN02470442 AJYZ00000000.2 na 1191301 246167 Vibrio crassostreae 9ZC13 strain=9ZC13 na latest Scaffold Major Full 2016-09-16 ASM27204v2 Broad Institute GCA_000272045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/045/GCF_000272045.2_ASM27204v2/ na na na haploid bacteria 5009683 4954748 44.500000 0 43 157 NCBI RefSeq GCF_000272045.2-RS_2025_06_02 2025-06-02 4440 4238 102 22955834 GCF_000272065.2 PRJNA224116 SAMN02470499 AJZA00000000.2 na 1191302 246167 Vibrio crassostreae 9ZC77 strain=9ZC77 na latest Scaffold Major Full 2016-09-16 ASM27206v2 Broad Institute GCA_000272065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/065/GCF_000272065.2_ASM27206v2/ na na na haploid bacteria 4820065 4819975 44.500000 0 595 604 NCBI RefSeq GCF_000272065.2-RS_2025_06_03 2025-06-03 4521 4268 54 22955834 GCF_000272085.2 PRJNA224116 SAMN02470500 AJZC00000000.2 na 1191303 246167 Vibrio crassostreae ZF-91 strain=ZF-91 na latest Scaffold Major Full 2016-09-16 ASM27208v2 Broad Institute GCA_000272085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/085/GCF_000272085.2_ASM27208v2/ na na na haploid bacteria 5056409 5056299 44.500000 0 296 307 NCBI RefSeq GCF_000272085.2-RS_2025_06_02 2025-06-02 4600 4378 76 22955834 GCF_000272105.2 PRJNA224116 SAMN02470443 AJZD00000000.2 na 1191305 29497 Vibrio splendidus 12E03 strain=12E03 na latest Scaffold Major Full 2016-09-16 ASM27210v2 Broad Institute GCA_000272105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/105/GCF_000272105.2_ASM27210v2/ na na na haploid bacteria 5369111 5368947 44.500000 0 360 374 NCBI RefSeq GCF_000272105.2-RS_2025_06_02 2025-06-02 4903 4708 20 22955834 GCF_000272125.2 PRJNA224116 SAMN02470501 AJZF00000000.2 na 617147 29497 Vibrio splendidus ZF-90 strain=ZF-90 na latest Scaffold Major Full 2016-09-16 ASM27212v2 Broad Institute GCA_000272125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/125/GCF_000272125.2_ASM27212v2/ na na na haploid bacteria 5422263 5421816 44.000000 0 183 218 NCBI RefSeq GCF_000272125.2-RS_2026_04_18 2026-04-18 4799 4686 25 22955834 GCF_000272145.2 PRJNA224116 SAMN02470455 AJYW00000000.2 na 1191298 723172 Vibrio genomosp. F6 str. FF-238 strain=FF-238 na latest Scaffold Major Full 2016-09-16 ASM27214v2 Broad Institute GCA_000272145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/145/GCF_000272145.2_ASM27214v2/ na na na haploid bacteria 4239624 4239349 42.500000 0 313 339 NCBI RefSeq GCF_000272145.2-RS_2025_06_03 2025-06-03 3859 3738 31 22955834 GCF_000272165.3 PRJNA224116 SAMN02470441 AJYX00000000.3 na 1191299 170673 Vibrio kanaloae 5S-149 strain=5S-149 na latest Scaffold Major Full 2024-08-26 ASM27216v3 Broad Institute GCA_000272165.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/165/GCF_000272165.3_ASM27216v3/ na na na haploid bacteria 4618721 4617943 44.000000 0 64 72 NCBI RefSeq GCF_000272165.3-RS_2025_12_12 2025-12-12 4103 4005 39 22955834;39423289 GCF_000272205.2 PRJNA224116 SAMN02470487 AJZB00000000.2 na 1191304 246167 Vibrio crassostreae 9ZC88 strain=9ZC88 na latest Scaffold Major Full 2016-09-16 ASM27220v2 Broad Institute GCA_000272205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/205/GCF_000272205.2_ASM27220v2/ na na na haploid bacteria 4845980 4845504 44.500000 0 173 212 NCBI RefSeq GCF_000272205.2-RS_2025_06_03 2025-06-03 4335 4189 24 22955834 GCF_000272245.2 PRJNA224116 SAMN02470477 AJZG00000000.2 na 617148 29497 Vibrio splendidus 5S-101 strain=5S-101 na latest Scaffold Major Full 2016-09-16 ASM27224v2 Broad Institute GCA_000272245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/245/GCF_000272245.2_ASM27224v2/ na na na haploid bacteria 5458218 5420682 44.000000 0 40 90 NCBI RefSeq GCF_000272245.2-RS_2026_03_31 2026-03-31 4789 4629 105 22955834 GCF_000272265.2 PRJNA224116 SAMN02470478 AJZH00000000.2 na 1191309 29497 Vibrio splendidus FF-500 strain=FF-500 na latest Scaffold Major Full 2016-09-16 ASM27226v2 Broad Institute GCA_000272265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/265/GCF_000272265.2_ASM27226v2/ na na na haploid bacteria 5858828 5795040 44.000000 0 58 167 NCBI RefSeq GCF_000272265.2-RS_2026_04_21 2026-04-21 5256 5019 101 22955834 GCF_000272285.1 PRJNA224116 SAMN02470445 AJZK00000000.1 na 1191312 29497 Vibrio splendidus 0407ZC148 strain=0407ZC148 na latest Contig Major Full 2012-06-25 Vib-0407ZC148 Broad Institute GCA_000272285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/285/GCF_000272285.1_Vib-0407ZC148/ na na na haploid bacteria 5497717 5497717 44.000000 0 282 282 NCBI RefSeq GCF_000272285.1-RS_2026_04_19 2026-04-19 4951 4819 22 22955834 GCF_000272305.2 PRJNA224116 SAMN02470502 AJZL00000000.2 na 1191313 29497 Vibrio splendidus 1S-124 strain=1S-124 na latest Scaffold Major Full 2016-09-16 ASM27230v2 Broad Institute GCA_000272305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/305/GCF_000272305.2_ASM27230v2/ na na na haploid bacteria 5272753 5272431 44.000000 0 313 340 NCBI RefSeq GCF_000272305.2-RS_2026_04_17 2026-04-17 4705 4601 26 22955834 GCF_000272325.2 PRJNA224116 SAMN02470457 AJZI00000000.2 na 617146 29497 Vibrio splendidus FF-6 strain=FF-6 na latest Scaffold Major Full 2016-09-16 ASM27232v2 Broad Institute GCA_000272325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/325/GCF_000272325.2_ASM27232v2/ na na na haploid bacteria 5639868 5639396 44.000000 0 340 382 NCBI RefSeq GCF_000272325.2-RS_2026_04_20 2026-04-20 5145 4970 26 22955834 GCF_000272345.2 PRJNA224116 SAMN02470444 AJZJ00000000.2 na 617145 29497 Vibrio splendidus 1F-157 strain=1F-157 na latest Scaffold Major Full 2016-09-16 ASM27234v2 Broad Institute GCA_000272345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/345/GCF_000272345.2_ASM27234v2/ na na na haploid bacteria 5590424 5589962 44.000000 0 603 645 NCBI RefSeq GCF_000272345.2-RS_2026_04_20 2026-04-20 5204 4910 28 22955834 GCF_000272365.2 PRJNA224116 SAMN02470458 AJZO00000000.2 na 1191324 212663 Vibrio tasmaniensis 1F-267 strain=1F-267 na latest Scaffold Major Full 2016-09-16 ASM27236v2 Broad Institute GCA_000272365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/365/GCF_000272365.2_ASM27236v2/ na na na haploid bacteria 5127516 5126856 44.000000 0 275 341 NCBI RefSeq GCF_000272365.2-RS_2025_06_02 2025-06-02 4686 4496 22 22955834 GCF_000272385.2 PRJNA224116 SAMN02470479 AJZN00000000.2 na 1191323 212663 Vibrio tasmaniensis 1F-155 strain=1F-155 na latest Scaffold Major Full 2016-09-16 ASM27238v2 Broad Institute GCA_000272385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/385/GCF_000272385.2_ASM27238v2/ na na na haploid bacteria 5193878 5193365 43.500000 0 743 792 NCBI RefSeq GCF_000272385.2-RS_2025_06_02 2025-06-02 4917 4659 26 22955834 GCF_000272425.1 PRJNA224116 SAMN02470485 AJZP00000000.1 na 1191325 212663 Vibrio tasmaniensis 5F-79 strain=5F-79 na latest Contig Major Full 2012-06-25 Vib-5F-79 Broad Institute GCA_000272425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/425/GCF_000272425.1_Vib-5F-79/ na na na haploid bacteria 5205437 5205437 44.000000 0 370 370 NCBI RefSeq GCF_000272425.1-RS_2025_06_02 2025-06-02 4900 4548 81 22955834 GCF_000272445.2 PRJNA224116 SAMN02470446 AJZQ00000000.2 na 1191326 212663 Vibrio tasmaniensis ZS-17 strain=ZS-17 na latest Scaffold Major Full 2016-09-16 ASM27244v2 Broad Institute GCA_000272445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/445/GCF_000272445.2_ASM27244v2/ na na na haploid bacteria 5612421 5547768 44.000000 0 58 141 NCBI RefSeq GCF_000272445.2-RS_2025_03_11 2025-03-11 5198 4910 107 22955834 GCF_000272475.1 PRJNA224116 SAMN02470867 AKFJ00000000.1 na 555793 555793 Novosphingobium sp. Rr 2-17 strain=Rr 2-17 na latest Contig Major Full 2012-06-25 ASM27247v1 Rochester Institute of Technology GCA_000272475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/475/GCF_000272475.1_ASM27247v1/ na na na haploid bacteria 4539029 4539029 62.500000 0 166 166 NCBI RefSeq GCF_000272475.1-RS_2025_08_27 2025-08-27 4378 4154 55 22933764 GCF_000272495.1 PRJNA224116 SAMN02470868 AKFK00000000.1 na 1096546 1096546 Methylobacterium sp. GXF4 strain=GXF4 na latest Contig Major Full 2012-06-25 ASM27249v1 Rochester Institute of Technology GCA_000272495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/495/GCF_000272495.1_ASM27249v1/ na na na haploid bacteria 6116340 6116340 69.500000 0 123 123 NCBI RefSeq GCF_000272495.1-RS_2024_06_01 2024-06-01 6000 5860 55 22933776 GCF_000272515.1 PRJNA224116 SAMN00811533 AHTJ00000000.1 na 789642 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 35185 strain=CVM 35185 na latest Contig Major Full 2012-06-25 ASM27251v1 FDA GCA_000272515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/515/GCF_000272515.1_ASM27251v1/ na na na haploid bacteria 4705783 4705783 52.000000 0 75 75 NCBI RefSeq GCF_000272515.1-RS_2025_04_26 2025-04-26 4558 4333 73 22933769 GCF_000272535.3 PRJNA224116 SAMN01813479 na na 789646 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 35188 strain=CVM 35188 na latest Complete Genome Major Full 2025-04-04 ASM27253v3 Center for Food Safety and Applied Nutrition GCA_000272535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/535/GCF_000272535.3_ASM27253v3/ na na na haploid bacteria 4759223 4759223 52.000000 2 2 2 NCBI RefSeq GCF_000272535.3-RS_2025_04_17 2025-04-17 4603 4341 121 na GCF_000272555.1 PRJNA224116 SAMN01805324 AHTO00000000.1 na 789647 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 21559 strain=CVM 21559 na latest Contig Major Full 2012-06-25 ASM27255v1 FDA GCA_000272555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/555/GCF_000272555.1_ASM27255v1/ na na na haploid bacteria 4742393 4742393 52.000000 0 56 56 NCBI RefSeq GCF_000272555.1-RS_2025_07_22 2025-07-22 4659 4447 81 na GCF_000272575.1 PRJNA224116 SAMN01816116 AHTP00000000.1 na 796737 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19447 strain=CVM 19447 na latest Contig Major Full 2012-06-25 ASM27257v1 FDA GCA_000272575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/575/GCF_000272575.1_ASM27257v1/ na na na haploid bacteria 4663815 4663815 52.000000 0 44 44 NCBI RefSeq GCF_000272575.1-RS_2025_03_19 2025-03-19 4525 4298 81 na GCF_000272595.1 PRJNA224116 SAMN00811536 AHTR00000000.1 na 796735 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19567 strain=CVM 19567 na latest Contig Major Full 2012-06-25 ASM27259v1 FDA GCA_000272595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/595/GCF_000272595.1_ASM27259v1/ na na na haploid bacteria 4663844 4663844 52.000000 0 40 40 NCBI RefSeq GCF_000272595.1-RS_2025_03_19 2025-03-19 4532 4318 83 na GCF_000272615.1 PRJNA224116 SAMN01813480 AHTS00000000.1 na 796734 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 35202 strain=CVM 35202 na latest Contig Major Full 2012-06-25 ASM27261v1 FDA GCA_000272615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/615/GCF_000272615.1_ASM27261v1/ na na na haploid bacteria 4955264 4955264 52.000000 0 63 63 NCBI RefSeq GCF_000272615.1-RS_2025_07_22 2025-07-22 4920 4669 90 na GCF_000272635.1 PRJNA224116 SAMN00811534 AHTK00000000.1 na 789643 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 35199 strain=CVM 35199 na latest Contig Major Full 2012-06-25 ASM27263v1 FDA GCA_000272635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/635/GCF_000272635.1_ASM27263v1/ na na na haploid bacteria 4747356 4747356 52.000000 0 57 57 NCBI RefSeq GCF_000272635.1-RS_2025_03_19 2025-03-19 4648 4417 72 na GCF_000272655.1 PRJNA224116 SAMN00811535 AHTL00000000.1 na 789644 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 21539 strain=CVM 21539 na latest Contig Major Full 2012-06-25 ASM27265v1 FDA GCA_000272655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/655/GCF_000272655.1_ASM27265v1/ na na na haploid bacteria 4711861 4711861 52.000000 0 57 57 NCBI RefSeq GCF_000272655.1-RS_2025_03_19 2025-03-19 4582 4354 82 na GCF_000272675.1 PRJNA224116 SAMN01765622 AHTM00000000.1 na 789645 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 33953 strain=CVM 33953 na latest Contig Major Full 2012-06-25 ASM27267v1 FDA GCA_000272675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/675/GCF_000272675.1_ASM27267v1/ na na na haploid bacteria 4798278 4798278 52.000000 0 68 68 NCBI RefSeq GCF_000272675.1-RS_2025_06_04 2025-06-04 4709 4486 75 22933769 GCF_000272695.1 PRJNA224116 SAMN01813413 AHTQ00000000.1 na 796736 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19449 strain=CVM 19449 na latest Contig Major Full 2012-06-25 ASM27269v1 FDA GCA_000272695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/695/GCF_000272695.1_ASM27269v1/ na na na haploid bacteria 4696073 4696073 52.000000 0 64 64 NCBI RefSeq GCF_000272695.1-RS_2025_03_19 2025-03-19 4580 4350 80 na GCF_000272715.4 PRJNA224116 SAMN01765627 na na 796733 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 strain=CVM 21550 na latest Complete Genome Major Full 2015-03-12 ASM27271v4 FDA GCA_000272715.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/715/GCF_000272715.4_ASM27271v4/ na na na haploid bacteria 4978519 4978519 52.000000 2 2 2 NCBI RefSeq GCF_000272715.4-RS_2026_06_28 2026-06-28 4926 4659 122 25720681 GCF_000272735.4 PRJNA224116 SAMN01805325 na na 796732 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 strain=CVM 22513 na latest Complete Genome Major Full 2015-03-12 ASM27273v4 FDA GCA_000272735.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/735/GCF_000272735.4_ASM27273v4/ na na na haploid bacteria 4951115 4951115 52.000000 2 2 2 NCBI RefSeq GCF_000272735.4-RS_2025_02_10 2025-02-10 4876 4579 121 25720681 GCF_000272755.4 PRJNA224116 SAMN01765628 na na 796731 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 strain=CVM 21538 na latest Complete Genome Major Full 2015-03-12 ASM27275v4 FDA GCA_000272755.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/755/GCF_000272755.4_ASM27275v4/ na na na haploid bacteria 4875940 4875940 52.000000 2 2 2 NCBI RefSeq GCF_000272755.4-RS_2025_04_16 2025-04-16 4797 4444 121 25720681 GCF_000272775.4 PRJNA224116 SAMN01813481 na na 796730 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 strain=CVM 22425 na latest Complete Genome Major Full 2015-03-12 ASM27277v4 FDA GCA_000272775.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/775/GCF_000272775.4_ASM27277v4/ na na na haploid bacteria 4991133 4991133 52.000000 2 2 2 NCBI RefSeq GCF_000272775.4-RS_2025_03_23 2025-03-23 4939 4627 123 25720681 GCF_000272815.2 PRJNA224116 SAMN01816117 na na 858306 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 strain=CVM N18486 na latest Complete Genome Major Full 2014-10-14 ASM27281v2 FDA GCA_000272815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/815/GCF_000272815.2_ASM27281v2/ na na na haploid bacteria 4755838 4755838 52.000000 1 1 1 NCBI RefSeq GCF_000272815.2-RS_2025_02_07 2025-02-07 4623 4383 119 25720681 GCF_000272835.5 PRJNA224116 SAMN01816118 na na 858307 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 strain=CVM N1543 na latest Complete Genome Major Full 2024-04-12 ASM27283v5 FDA GCA_000272835.5 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/835/GCF_000272835.5_ASM27283v5/ na na na haploid bacteria 5005248 5005248 52.000000 3 3 3 NCBI RefSeq GCF_000272835.5-RS_2025_05_20 2025-05-20 4938 4673 123 25720681 GCF_000272855.1 PRJNA224116 SAMN01813414 AHUF00000000.1 na 859196 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19536 strain=CVM 19536 na latest Contig Major Full 2012-06-25 ASM27285v1 FDA GCA_000272855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/855/GCF_000272855.1_ASM27285v1/ na na na haploid bacteria 4648813 4648813 52.000000 0 62 62 NCBI RefSeq GCF_000272855.1-RS_2025_08_25 2025-08-25 4585 4317 90 na GCF_000272875.1 PRJNA224116 SAMN01813415 AHUG00000000.1 na 859197 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 4176 strain=CVM 4176 na latest Contig Major Full 2012-06-25 ASM27287v1 FDA GCA_000272875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/875/GCF_000272875.1_ASM27287v1/ na na na haploid bacteria 4935915 4935915 52.000000 0 54 54 NCBI RefSeq GCF_000272875.1-RS_2025_08_25 2025-08-25 4910 4581 84 na GCF_000272895.2 PRJNA224116 SAMN01813482 na na 858305 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 strain=CVM 22462 na latest Complete Genome Major Full 2015-01-07 ASM27289v3 FDA GCA_000272895.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/895/GCF_000272895.2_ASM27289v3/ na na na haploid bacteria 5121199 5121199 52.000000 4 4 4 NCBI RefSeq GCF_000272895.2-RS_2025_02_07 2025-02-07 5087 4817 123 25720681 GCF_000272915.1 PRJNA224116 SAMN01765623 AHUB00000000.1 na 858309 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19443 strain=CVM 19443 na latest Contig Major Full 2012-06-25 ASM27291v1 FDA GCA_000272915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/915/GCF_000272915.1_ASM27291v1/ na na na haploid bacteria 4806351 4806351 52.000000 0 62 62 NCBI RefSeq GCF_000272915.1-RS_2025_04_26 2025-04-26 4761 4479 86 22933769 GCF_000272935.1 PRJNA224116 SAMN01765624 AHUC00000000.1 na 858310 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 37978 strain=CVM 37978 na latest Contig Major Full 2012-06-25 ASM27293v1 FDA GCA_000272935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/935/GCF_000272935.1_ASM27293v1/ na na na haploid bacteria 4795527 4795527 52.500000 0 38 38 NCBI RefSeq GCF_000272935.1-RS_2025_04_26 2025-04-26 4717 4444 88 22933769 GCF_000272955.1 PRJNA224116 SAMN01765625 AHUD00000000.1 na 858311 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19593 strain=CVM 19593 na latest Contig Major Full 2012-06-25 ASM27295v1 FDA GCA_000272955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/955/GCF_000272955.1_ASM27295v1/ na na na haploid bacteria 4652670 4652670 52.000000 0 65 65 NCBI RefSeq GCF_000272955.1-RS_2025_04_15 2025-04-15 4553 4300 92 22933769 GCF_000272975.1 PRJNA224116 SAMN01765626 AHUE00000000.1 na 858312 28901 Salmonella enterica subsp. enterica serovar Newport str. CVM 19470 strain=CVM 19470 na latest Contig Major Full 2012-06-25 ASM27297v1 FDA GCA_000272975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/272/975/GCF_000272975.1_ASM27297v1/ na na na haploid bacteria 4729077 4729077 52.000000 0 74 74 NCBI RefSeq GCF_000272975.1-RS_2025_04_15 2025-04-15 4679 4421 91 22933769 GCF_000273015.1 PRJNA224116 SAMN02463917 AGXG00000000.1 na 997874 246787 Bacteroides cellulosilyticus CL02T12C19 strain=CL02T12C19 na latest Scaffold Major Full 2012-07-23 Bact_cell_CL02T12C19_V1 Broad Institute GCA_000273015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/015/GCF_000273015.1_Bact_cell_CL02T12C19_V1/ na na na haploid bacteria 7694202 7678005 43.000000 0 25 171 NCBI RefSeq GCF_000273015.1-RS_2025_01_08 2025-01-08 6223 5975 79 na GCF_000273055.1 PRJNA224116 SAMN02463919 AGXJ00000000.1 na 997876 357276 Phocaeicola dorei CL02T12C06 strain=CL02T12C06 na latest Scaffold Major Full 2012-07-23 Bact_dore_CL02T12C06_V1 Broad Institute GCA_000273055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/055/GCF_000273055.1_Bact_dore_CL02T12C06_V1/ na na na haploid bacteria 6060928 5997311 42.000000 0 21 110 NCBI RefSeq GCF_000273055.1-RS_2026_01_09 2026-01-09 5154 4855 127 na GCF_000273075.1 PRJNA224116 SAMN02463920 AGXI00000000.1 na 997877 357276 Phocaeicola dorei CL03T12C01 strain=CL03T12C01 na latest Scaffold Major Full 2012-07-23 Bact_dore_CL03T12C01_V1 Broad Institute GCA_000273075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/075/GCF_000273075.1_Bact_dore_CL03T12C01_V1/ na na na haploid bacteria 5409377 5387249 41.500000 0 20 47 NCBI RefSeq GCF_000273075.1-RS_2026_01_08 2026-01-08 4421 4208 106 na GCF_000273095.1 PRJNA224116 SAMN02463921 AGXK00000000.1 na 997878 817 Bacteroides fragilis CL03T00C08 strain=CL03T00C08 na latest Scaffold Major Full 2012-07-23 Bact_frag_CL03T00C08_V1 Broad Institute GCA_000273095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/095/GCF_000273095.1_Bact_frag_CL03T00C08_V1/ na na na haploid bacteria 5238793 5225835 43.500000 0 8 35 NCBI RefSeq GCF_000273095.1-RS_2025_12_12 2025-12-12 4351 4181 104 na GCF_000273115.1 PRJNA224116 SAMN02463922 AGXL00000000.1 na 997879 817 Bacteroides fragilis CL03T12C07 strain=CL03T12C07 na latest Scaffold Major Full 2012-07-23 Bact_frag_CL03T12C07_V1 Broad Institute GCA_000273115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/115/GCF_000273115.1_Bact_frag_CL03T12C07_V1/ na na na haploid bacteria 5226222 5214028 43.500000 0 7 35 NCBI RefSeq GCF_000273115.1-RS_2024_10_25 2024-10-25 4342 4196 83 na GCF_000273135.1 PRJNA224116 SAMN02463924 AGXP00000000.1 na 997881 817 Bacteroides fragilis CL05T12C13 strain=CL05T12C13 na latest Scaffold Major Full 2012-07-23 Bact_frag_CL05T12C13_V1 Broad Institute GCA_000273135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/135/GCF_000273135.1_Bact_frag_CL05T12C13_V1/ na na na haploid bacteria 5281556 5272458 43.500000 0 13 59 NCBI RefSeq GCF_000273135.1-RS_2025_12_19 2025-12-19 4415 4264 70 na GCF_000273155.1 PRJNA224116 SAMN02463926 AGXN00000000.1 na 997883 817 Bacteroides fragilis CL07T12C05 strain=CL07T12C05 na latest Scaffold Major Full 2012-07-23 Bact_frag_CL07T12C05_V1 Broad Institute GCA_000273155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/155/GCF_000273155.1_Bact_frag_CL07T12C05_V1/ na na na haploid bacteria 5444546 5430227 43.500000 0 11 35 NCBI RefSeq GCF_000273155.1-RS_2025_12_25 2025-12-25 4560 4352 105 na GCF_000273175.1 PRJNA224116 SAMN02463927 AGXS00000000.1 na 997884 291645 Bacteroides nordii CL02T12C05 strain=CL02T12C05 na latest Scaffold Major Full 2012-07-23 Bact_nord_CL02T12C05_V1 Broad Institute GCA_000273175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/175/GCF_000273175.1_Bact_nord_CL02T12C05_V1/ na na na haploid bacteria 5718278 5707589 41.000000 0 10 35 NCBI RefSeq GCF_000273175.1-RS_2025_12_04 2025-12-04 4435 4264 88 na GCF_000273215.1 PRJNA224116 SAMN02463929 AGXU00000000.1 na 997886 28116 Bacteroides ovatus CL03T12C18 strain=CL03T12C18 na latest Scaffold Major Full 2012-07-23 Bact_ovat_CL03T12C18_V1 Broad Institute GCA_000273215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/215/GCF_000273215.1_Bact_ovat_CL03T12C18_V1/ na na na haploid bacteria 7010996 6972153 42.500000 0 19 67 NCBI RefSeq GCF_000273215.1-RS_2025_12_23 2025-12-23 5508 5303 108 na GCF_000273235.1 PRJNA224116 SAMN02463930 AGXV00000000.1 na 997887 291644 Bacteroides salyersiae CL02T12C01 strain=CL02T12C01 na latest Scaffold Major Full 2012-07-23 Bact_saly_CL02T12C01_V1 Broad Institute GCA_000273235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/235/GCF_000273235.1_Bact_saly_CL02T12C01_V1/ na na na haploid bacteria 5815758 5781840 42.000000 0 7 56 NCBI RefSeq GCF_000273235.1-RS_2025_12_12 2025-12-12 4569 4373 92 na GCF_000273275.1 PRJNA224116 SAMN02463933 AGXY00000000.1 na 997890 820 Bacteroides uniformis CL03T12C37 strain=CL03T12C37 na latest Scaffold Major Full 2012-07-23 Bact_unif_CL03T12C37_V1 Broad Institute GCA_000273275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/275/GCF_000273275.1_Bact_unif_CL03T12C37_V1/ na na na haploid bacteria 4922797 4890738 46.000000 0 14 51 NCBI RefSeq GCF_000273275.1-RS_2026_01_08 2026-01-08 4089 3919 89 na GCF_000273315.1 PRJNA224116 SAMN02463935 AGXE00000000.1 na 997892 371601 Bacteroides xylanisolvens CL03T12C04 strain=CL03T12C04 na latest Scaffold Major Full 2012-07-23 Bact_xyla_CL03T12C04_V1 Broad Institute GCA_000273315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/315/GCF_000273315.1_Bact_xyla_CL03T12C04_V1/ na na na haploid bacteria 6067695 6056103 42.000000 0 13 41 NCBI RefSeq GCF_000273315.1-RS_2025_01_08 2025-01-08 4741 4570 75 na GCF_000273375.1 PRJNA224116 SAMN02472046 AKIP00000000.1 na 1095900 111504 Bartonella birtlesii IBS 325 strain=IBS 325 na latest Chromosome Major Full 2012-08-06 ASM27337v1 URMITE GCA_000273375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/375/GCF_000273375.1_ASM27337v1/ na assembly from type material na haploid bacteria 1834009 1803246 37.500000 1 1 35 NCBI RefSeq GCF_000273375.1-RS_2026_04_29 2026-04-29 1607 1422 52 22887676 GCF_000273405.1 PRJNA224116 SAMN02597082 AKVW00000000.1 na 272943 1063 Cereibacter sphaeroides 2.4.1 strain=2.4.1 na latest Complete Genome Major Full 2012-06-25 Rhod_Spha_2_4_1_V1 Broad Institute GCA_000273405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/405/GCF_000273405.1_Rhod_Spha_2_4_1_V1/ na assembly from type material na haploid bacteria 4628173 4628173 69.000000 7 7 7 NCBI RefSeq GCF_000273405.1-RS_2025_12_07 2025-12-07 4492 4348 65 22829535 GCF_000273445.1 PRJNA224116 SAMN02597080 AKVY00000000.1 na 170187 1313 Streptococcus pneumoniae TIGR4 strain=TIGR4 na latest Complete Genome Major Full 2012-06-25 Stre_pneu_Tigr4_V1 Broad Institute GCA_000273445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/445/GCF_000273445.1_Stre_pneu_Tigr4_V1/ na na na haploid bacteria 2163340 2163340 39.500000 1 1 1 NCBI RefSeq GCF_000273445.1-RS_2026_03_20 2026-03-20 2207 1965 73 22829535 GCF_000273465.1 PRJNA224116 SAMN02463790 AKBX00000000.1 na 665953 28111 Bacteroides eggerthii 1_2_48FAA strain=1_2_48FAA na latest Contig Major Full 2012-06-15 PB_Bact_egge_1_2_48FAA_V1 Broad Institute GCA_000273465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/465/GCF_000273465.1_PB_Bact_egge_1_2_48FAA_V1/ na na na haploid bacteria 4611535 4611535 44.500000 0 28 28 NCBI RefSeq GCF_000273465.1-RS_2025_12_04 2025-12-04 3945 3818 68 22829535 GCF_000273525.1 PRJNA224116 SAMN02463676 AKCA00000000.1 na 398513 1681 Bifidobacterium bifidum NCIMB 41171 strain=NCIMB 41171 na latest Contig Major Full 2012-06-15 PB_Bifi_bifi_NCIMB_41171_V1 Broad Institute GCA_000273525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/525/GCF_000273525.1_PB_Bifi_bifi_NCIMB_41171_V1/ na na na haploid bacteria 2216395 2216395 63.000000 0 1 1 NCBI RefSeq GCF_000273525.1-RS_2026_03_28 2026-03-28 1889 1756 65 22829535 GCF_000273565.1 PRJNA224116 SAMN02596921 AKCC00000000.1 na 565655 37734 Enterococcus casseliflavus EC20 strain=EC20 na latest Contig Major Full 2012-06-15 PB_Ente_cass_899205_V1 Broad Institute GCA_000273565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/565/GCF_000273565.1_PB_Ente_cass_899205_V1/ na na na haploid bacteria 3428870 3428870 43.000000 0 1 1 NCBI RefSeq GCF_000273565.1-RS_2026_03_28 2026-03-28 3197 3095 79 22829535 GCF_000273605.1 PRJNA224116 SAMN02596922 AKCE00000000.1 na 999414 76859 Fusobacterium animalis F0419 strain=F0419 na latest Contig Major Full 2012-06-15 PB_Fuso_nucl_ss_animalis_F0419_V1 Broad Institute GCA_000273605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/605/GCF_000273605.1_PB_Fuso_nucl_ss_animalis_F0419_V1/ na na na haploid bacteria 2438048 2438048 27.000000 0 5 5 NCBI RefSeq GCF_000273605.1-RS_2026_03_30 2026-03-30 2353 2258 64 22829535 GCF_000273625.1 PRJNA224116 SAMN02463711 AKBT00000000.1 na 457405 76859 Fusobacterium animalis 7_1 strain=7_1 na latest Contig Major Full 2012-06-15 PB_Fuso_sp_7_1_V1 Broad Institute GCA_000273625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/625/GCF_000273625.1_PB_Fuso_sp_7_1_V1/ na na na haploid bacteria 2515488 2515488 27.000000 0 4 4 NCBI RefSeq GCF_000273625.1-RS_2026_04_03 2026-04-03 2496 2383 67 22829535 GCF_000273665.1 PRJNA224116 SAMN02595242 AKCG00000000.1 na 528352 485 Neisseria gonorrhoeae FA19 strain=FA19 na latest Contig Major Full 2012-06-15 PB_Neis_gono_FA19_V1 Broad Institute GCA_000273665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/665/GCF_000273665.1_PB_Neis_gono_FA19_V1/ na na na haploid bacteria 2218031 2218031 52.500000 0 11 11 NCBI RefSeq GCF_000273665.1-RS_2026_03_28 2026-03-28 2330 2006 68 22829535 GCF_000273685.1 PRJNA224116 SAMN02596923 AKCH00000000.1 na 528354 485 Neisseria gonorrhoeae MS11 strain=MS11 na latest Contig Major Full 2012-06-15 PB_Neis_gono_MS11_V1 Broad Institute GCA_000273685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/685/GCF_000273685.1_PB_Neis_gono_MS11_V1/ na na na haploid bacteria 2233325 2233325 52.500000 0 8 8 NCBI RefSeq GCF_000273685.1-RS_2025_04_15 2025-04-15 2357 2022 71 22829535 GCF_000273725.1 PRJNA224116 SAMN02463916 AGXF00000000.1 na 997873 47678 Bacteroides caccae CL03T12C61 strain=CL03T12C61 na latest Scaffold Major Full 2012-07-23 Bact_cacc_CL03T12C61_V1 Broad Institute GCA_000273725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/725/GCF_000273725.1_Bact_cacc_CL03T12C61_V1/ na na na haploid bacteria 5493117 5479119 43.000000 0 6 27 NCBI RefSeq GCF_000273725.1-RS_2025_12_03 2025-12-03 4583 4371 91 na GCF_000273745.1 PRJNA224116 SAMN02469769 AKVZ00000000.1 na 1196662 787 Rickettsia australis str. Phillips strain=Phillips na latest Contig Major Full 2012-06-27 Rau1.0 CNRS UMR 6236, Faculté de médecine, Université de la Méditerranée GCA_000273745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/745/GCF_000273745.1_Rau1.0/ na assembly from type material na haploid bacteria 1320572 1320572 32.500000 1 59 59 NCBI RefSeq GCF_000273745.1-RS_2026_01_08 2026-01-08 1478 1272 40 22933759 GCF_000273765.1 PRJNA224116 SAMN02463923 AGXO00000000.1 na 997880 817 Bacteroides fragilis CL05T00C42 strain=CL05T00C42 na latest Scaffold Major Full 2012-07-23 Bact_frag_CL05T00C42_V1 Broad Institute GCA_000273765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/765/GCF_000273765.1_Bact_frag_CL05T00C42_V1/ na na na haploid bacteria 5290489 5279416 43.500000 0 5 25 NCBI RefSeq GCF_000273765.1-RS_2025_12_14 2025-12-14 4415 4247 89 na GCF_000273785.1 PRJNA224116 SAMN02463932 AGXX00000000.1 na 997889 820 Bacteroides uniformis CL03T00C23 strain=CL03T00C23 na latest Scaffold Major Full 2012-07-23 Bact_unif_CL03T00C23_V1 Broad Institute GCA_000273785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/785/GCF_000273785.1_Bact_unif_CL03T00C23_V1/ na na na haploid bacteria 4958941 4914943 46.500000 0 8 60 NCBI RefSeq GCF_000273785.1-RS_2026_01_09 2026-01-09 4131 3956 77 na GCF_000273805.1 PRJNA224116 SAMN00778907 AKOM00000000.1 na 992046 210 Helicobacter pylori Hp H-41 strain=Hp H-41 na latest Contig Major Full 2012-06-28 ASM27380v1 Institute for Genome Sciences GCA_000273805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/805/GCF_000273805.1_ASM27380v1/ na na na haploid bacteria 1660567 1660567 39.000000 0 11 11 NCBI RefSeq GCF_000273805.1-RS_2026_04_30 2026-04-30 1603 1463 49 23661595 GCF_000273825.1 PRJNA224116 SAMN00778858 AKOS00000000.1 na 992053 210 Helicobacter pylori Hp A-8 strain=Hp A-8 na latest Contig Major Full 2012-06-28 ASM27382v1 Institute for Genome Sciences GCA_000273825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/825/GCF_000273825.1_ASM27382v1/ na na na haploid bacteria 1640628 1640628 39.000000 0 7 7 NCBI RefSeq GCF_000273825.1-RS_2026_06_23 2026-06-23 1571 1439 41 23661595 GCF_000273845.1 PRJNA224116 SAMN00778917 AKOL00000000.1 na 992044 210 Helicobacter pylori Hp H-36 strain=Hp H-36 na latest Contig Major Full 2012-06-28 ASM27384v1 Institute for Genome Sciences GCA_000273845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/845/GCF_000273845.1_ASM27384v1/ na na na haploid bacteria 1675907 1675907 39.000000 0 16 16 NCBI RefSeq GCF_000273845.1-RS_2026_01_10 2026-01-10 1614 1481 46 na GCF_000273865.2 PRJNA224116 SAMN00778887 AKOK00000000.1 na 992043 210 Helicobacter pylori Hp H-30 strain=Hp H-30 na latest Contig Minor Full 2012-06-28 ASM27386v2 Institute for Genome Sciences GCA_000273865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/865/GCF_000273865.2_ASM27386v2/ na na na haploid bacteria 1625395 1625395 39.500000 0 11 11 NCBI RefSeq GCF_000273865.2-RS_2026_04_25 2026-04-25 1546 1417 49 23661595 GCF_000273885.1 PRJNA224116 SAMN00778898 AKOJ00000000.1 na 992042 210 Helicobacter pylori Hp H-29 strain=Hp H-29 na latest Contig Major Full 2012-06-28 ASM27388v1 Institute for Genome Sciences GCA_000273885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/885/GCF_000273885.1_ASM27388v1/ na na na haploid bacteria 1677607 1677607 39.000000 0 16 16 NCBI RefSeq GCF_000273885.1-RS_2026_01_10 2026-01-10 1603 1483 49 na GCF_000273905.1 PRJNA224116 SAMN00778881 AKON00000000.1 na 992047 210 Helicobacter pylori Hp H-42 strain=Hp H-42 na latest Contig Major Full 2012-06-28 ASM27390v1 Institute for Genome Sciences GCA_000273905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/905/GCF_000273905.1_ASM27390v1/ na na na haploid bacteria 1702292 1702292 39.000000 0 19 19 NCBI RefSeq GCF_000273905.1-RS_2026_01_10 2026-01-10 1631 1479 48 na GCF_000273925.1 PRJNA224116 SAMN00778872 AKOP00000000.1 na 992049 210 Helicobacter pylori Hp H-44 strain=Hp H-44 na latest Contig Major Full 2012-06-28 ASM27392v1 Institute for Genome Sciences GCA_000273925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/925/GCF_000273925.1_ASM27392v1/ na na na haploid bacteria 1665840 1665840 39.000000 0 16 16 NCBI RefSeq GCF_000273925.1-RS_2026_01_10 2026-01-10 1596 1475 44 na GCF_000273945.1 PRJNA224116 SAMN00778904 AKOQ00000000.1 na 992050 210 Helicobacter pylori Hp H-45 strain=Hp H-45 na latest Contig Major Full 2012-06-28 ASM27394v1 Institute for Genome Sciences GCA_000273945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/945/GCF_000273945.1_ASM27394v1/ na na na haploid bacteria 1655397 1655397 39.000000 0 14 14 NCBI RefSeq GCF_000273945.1-RS_2026_06_24 2026-06-24 1615 1471 50 23661595 GCF_000273965.1 PRJNA224116 SAMN00778893 AKOO00000000.1 na 992048 210 Helicobacter pylori Hp H-43 strain=Hp H-43 na latest Contig Major Full 2012-06-28 ASM27396v1 Institute for Genome Sciences GCA_000273965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/965/GCF_000273965.1_ASM27396v1/ na na na haploid bacteria 1607665 1607665 39.000000 0 12 12 NCBI RefSeq GCF_000273965.1-RS_2026_04_25 2026-04-25 1532 1406 47 23661595 GCF_000273985.1 PRJNA224116 SAMN00778863 AKOR00000000.1 na 992052 210 Helicobacter pylori Hp A-6 strain=Hp A-6 na latest Contig Major Full 2012-06-28 ASM27398v1 Institute for Genome Sciences GCA_000273985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/273/985/GCF_000273985.1_ASM27398v1/ na na na haploid bacteria 1653378 1653378 39.000000 0 12 12 NCBI RefSeq GCF_000273985.1-RS_2026_04_29 2026-04-29 1580 1448 46 23661595 GCF_000274005.2 PRJNA224116 SAMN00778856 AKOT00000000.1 na 992054 210 Helicobacter pylori Hp A-14 strain=Hp A-14 na latest Contig Minor Full 2012-06-28 ASM27400v2 Institute for Genome Sciences GCA_000274005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/005/GCF_000274005.2_ASM27400v2/ na na na haploid bacteria 1594597 1594597 39.000000 0 7 7 NCBI RefSeq GCF_000274005.2-RS_2026_04_30 2026-04-30 1525 1404 46 23661595 GCF_000274025.1 PRJNA224116 SAMN00778866 AKOV00000000.1 na 992056 210 Helicobacter pylori Hp A-26 strain=Hp A-26 na latest Contig Major Full 2012-06-28 ASM27402v1 Institute for Genome Sciences GCA_000274025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/025/GCF_000274025.1_ASM27402v1/ na na na haploid bacteria 1624194 1624194 39.000000 0 9 9 NCBI RefSeq GCF_000274025.1-RS_2026_06_24 2026-06-24 1582 1447 45 23661595 GCF_000274045.2 PRJNA224116 SAMN00778867 AKOW00000000.1 na 992057 210 Helicobacter pylori Hp A-27 strain=Hp A-27 na latest Contig Minor Full 2012-06-28 ASM27404v2 Institute for Genome Sciences GCA_000274045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/045/GCF_000274045.2_ASM27404v2/ na na na haploid bacteria 1647774 1647774 39.000000 0 6 6 NCBI RefSeq GCF_000274045.2-RS_2026_07_03 2026-07-03 1598 1443 46 23661595 GCF_000274065.1 PRJNA224116 SAMN00778911 AKOX00000000.1 na 992059 210 Helicobacter pylori Hp H-3 strain=Hp H-3 na latest Contig Major Full 2012-06-28 ASM27406v1 Institute for Genome Sciences GCA_000274065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/065/GCF_000274065.1_ASM27406v1/ na na na haploid bacteria 1712042 1712042 39.000000 0 11 11 NCBI RefSeq GCF_000274065.1-RS_2025_04_21 2025-04-21 1602 1481 49 23661595 GCF_000274085.2 PRJNA224116 SAMN00778912 AKPA00000000.1 na 992062 210 Helicobacter pylori Hp H-9 strain=Hp H-9 na latest Contig Minor Full 2012-06-28 ASM27408v2 Institute for Genome Sciences GCA_000274085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/085/GCF_000274085.2_ASM27408v2/ na na na haploid bacteria 1637692 1637692 39.000000 0 11 11 NCBI RefSeq GCF_000274085.2-RS_2026_06_29 2026-06-29 1574 1436 44 23661595 GCF_000274125.1 PRJNA224116 SAMN00778854 AKPE00000000.1 na 992066 210 Helicobacter pylori Hp H-19 strain=Hp H-19 na latest Contig Major Full 2012-06-28 ASM27412v1 Institute for Genome Sciences GCA_000274125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/125/GCF_000274125.1_ASM27412v1/ na na na haploid bacteria 1634366 1634366 39.500000 0 7 7 NCBI RefSeq GCF_000274125.1-RS_2026_04_26 2026-04-26 1561 1428 47 23661595 GCF_000274145.1 PRJNA224116 SAMN00778902 AKOY00000000.1 na 992060 210 Helicobacter pylori Hp H-4 strain=Hp H-4 na latest Contig Major Full 2012-06-28 ASM27414v1 Institute for Genome Sciences GCA_000274145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/145/GCF_000274145.1_ASM27414v1/ na na na haploid bacteria 1665093 1665093 39.000000 0 9 9 NCBI RefSeq GCF_000274145.1-RS_2026_04_25 2026-04-25 1598 1472 47 23661595 GCF_000274165.1 PRJNA224116 SAMN00778865 AKPG00000000.1 na 992068 210 Helicobacter pylori Hp H-23 strain=Hp H-23 na latest Contig Major Full 2012-06-28 ASM27416v1 Institute for Genome Sciences GCA_000274165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/165/GCF_000274165.1_ASM27416v1/ na na na haploid bacteria 1648064 1648064 39.000000 0 9 9 NCBI RefSeq GCF_000274165.1-RS_2026_04_24 2026-04-24 1573 1456 44 23661595 GCF_000274185.2 PRJNA224116 SAMN00778855 AKPF00000000.1 na 992067 210 Helicobacter pylori Hp H-21 strain=Hp H-21 na latest Contig Minor Full 2012-06-28 ASM27418v2 Institute for Genome Sciences GCA_000274185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/185/GCF_000274185.2_ASM27418v2/ na na na haploid bacteria 1623667 1623667 39.000000 0 6 6 NCBI RefSeq GCF_000274185.2-RS_2026_04_23 2026-04-23 1564 1447 48 23661595 GCF_000274245.1 PRJNA224116 SAMN00778889 AKPM00000000.1 na 992077 210 Helicobacter pylori Hp P-8 strain=Hp P-8 na latest Contig Major Full 2012-06-28 ASM27424v1 Institute for Genome Sciences GCA_000274245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/245/GCF_000274245.1_ASM27424v1/ na na na haploid bacteria 1615626 1615626 39.000000 0 7 7 NCBI RefSeq GCF_000274245.1-RS_2025_04_14 2025-04-14 1558 1421 47 23661595 GCF_000274265.1 PRJNA224116 SAMN00778906 AKPH00000000.1 na 992069 210 Helicobacter pylori Hp H-34 strain=Hp H-34 na latest Contig Major Full 2012-06-28 ASM27426v1 Institute for Genome Sciences GCA_000274265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/265/GCF_000274265.1_ASM27426v1/ na na na haploid bacteria 1627237 1627237 39.000000 0 8 8 NCBI RefSeq GCF_000274265.1-RS_2026_06_24 2026-06-24 1573 1436 45 23661595 GCF_000274285.1 PRJNA224116 SAMN00778875 AKPP00000000.1 na 992080 210 Helicobacter pylori Hp P-15 strain=Hp P-15 na latest Contig Major Full 2012-06-28 ASM27428v1 Institute for Genome Sciences GCA_000274285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/285/GCF_000274285.1_ASM27428v1/ na na na haploid bacteria 1652821 1652821 39.000000 0 4 4 NCBI RefSeq GCF_000274285.1-RS_2026_07_02 2026-07-02 1602 1444 49 23661595 GCF_000274305.1 PRJNA224116 SAMN00778876 AKPQ00000000.1 na 992081 210 Helicobacter pylori Hp P-16 strain=Hp P-16 na latest Contig Major Full 2012-06-28 ASM27430v1 Institute for Genome Sciences GCA_000274305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/305/GCF_000274305.1_ASM27430v1/ na na na haploid bacteria 1549132 1549132 39.000000 0 5 5 NCBI RefSeq GCF_000274305.1-RS_2026_05_01 2026-05-01 1496 1371 44 23661595 GCF_000274345.1 PRJNA224116 SAMN00778888 AKPX00000000.1 na 992091 210 Helicobacter pylori Hp P-74 strain=Hp P-74 na latest Contig Major Full 2012-06-28 ASM27434v1 Institute for Genome Sciences GCA_000274345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/345/GCF_000274345.1_ASM27434v1/ na na na haploid bacteria 1622385 1622385 39.000000 0 2 2 NCBI RefSeq GCF_000274345.1-RS_2026_04_21 2026-04-21 1563 1439 46 23661595 GCF_000274365.1 PRJNA224116 SAMN00778873 AKQF00000000.1 na 992092 210 Helicobacter pylori Hp H-5b strain=Hp H-5b na latest Contig Major Full 2012-06-28 ASM27436v1 Institute for Genome Sciences GCA_000274365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/365/GCF_000274365.1_ASM27436v1/ na na na haploid bacteria 1708533 1708533 39.000000 0 11 11 NCBI RefSeq GCF_000274365.1-RS_2025_04_21 2025-04-21 1628 1490 42 23661595 GCF_000274385.2 PRJNA224116 SAMN00778895 AKQH00000000.1 na 992106 210 Helicobacter pylori Hp P-11b strain=Hp P-11b na latest Contig Minor Full 2012-06-28 ASM27438v2 Institute for Genome Sciences GCA_000274385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/385/GCF_000274385.2_ASM27438v2/ na na na haploid bacteria 1692478 1692478 39.000000 0 11 11 NCBI RefSeq GCF_000274385.2-RS_2026_01_21 2026-01-21 1659 1510 49 na GCF_000274405.1 PRJNA224116 SAMN00778900 AKQI00000000.1 na 992107 210 Helicobacter pylori Hp P-13b strain=Hp P-13b na latest Contig Major Full 2012-06-28 ASM27440v1 Institute for Genome Sciences GCA_000274405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/405/GCF_000274405.1_ASM27440v1/ na na na haploid bacteria 1711532 1711532 39.000000 0 8 8 NCBI RefSeq GCF_000274405.1-RS_2026_02_17 2026-02-17 1635 1512 48 na GCF_000274425.2 PRJNA224116 SAMN00778874 AKQJ00000000.1 na 992108 210 Helicobacter pylori Hp P-15b strain=Hp P-15b na latest Contig Minor Full 2012-06-28 ASM27442v2 Institute for Genome Sciences GCA_000274425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/425/GCF_000274425.2_ASM27442v2/ na na na haploid bacteria 1653784 1653784 39.000000 0 6 6 NCBI RefSeq GCF_000274425.2-RS_2026_01_21 2026-01-21 1602 1456 50 na GCF_000274445.2 PRJNA224116 SAMN00778877 AKQA00000000.1 na 992098 210 Helicobacter pylori Hp P-1b strain=Hp P-1b na latest Contig Minor Full 2012-06-28 ASM27444v2 Institute for Genome Sciences GCA_000274445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/445/GCF_000274445.2_ASM27444v2/ na na na haploid bacteria 1668053 1668053 39.000000 0 7 7 NCBI RefSeq GCF_000274445.2-RS_2026_01_21 2026-01-21 1597 1467 42 na GCF_000274465.1 PRJNA224116 SAMN00778886 AKQK00000000.1 na 992111 210 Helicobacter pylori Hp P-25c strain=Hp P-25c na latest Contig Major Full 2012-06-28 ASM27446v1 Institute for Genome Sciences GCA_000274465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/465/GCF_000274465.1_ASM27446v1/ na na na haploid bacteria 1669110 1669110 39.000000 0 6 6 NCBI RefSeq GCF_000274465.1-RS_2026_01_10 2026-01-10 1612 1472 45 na GCF_000274485.2 PRJNA224116 SAMN00778851 AKPC00000000.1 na 992064 210 Helicobacter pylori Hp H-11 strain=Hp H-11 na latest Contig Minor Full 2012-06-28 ASM27448v2 Institute for Genome Sciences GCA_000274485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/485/GCF_000274485.2_ASM27448v2/ na na na haploid bacteria 1657667 1657667 39.000000 0 9 9 NCBI RefSeq GCF_000274485.2-RS_2026_07_01 2026-07-01 1618 1468 50 23661595 GCF_000274505.1 PRJNA224116 SAMN00778853 AKPD00000000.1 na 992065 210 Helicobacter pylori Hp H-18 strain=Hp H-18 na latest Contig Major Full 2012-06-28 ASM27450v1 Institute for Genome Sciences GCA_000274505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/505/GCF_000274505.1_ASM27450v1/ na na na haploid bacteria 1760691 1760691 39.000000 0 21 21 NCBI RefSeq GCF_000274505.1-RS_2026_01_14 2026-01-14 1694 1535 52 na GCF_000274545.2 PRJNA224116 SAMN00777287 AKNZ00000000.1 na 992031 210 Helicobacter pylori NQ4110 strain=NQ4110 na latest Contig Minor Full 2012-06-28 ASM27454v2 Institute for Genome Sciences GCA_000274545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/545/GCF_000274545.2_ASM27454v2/ na na na haploid bacteria 1596647 1596647 39.000000 0 2 2 NCBI RefSeq GCF_000274545.2-RS_2026_04_21 2026-04-21 1525 1406 48 23661595 GCF_000274565.1 PRJNA224116 SAMN00777286 AKNU00000000.1 na 992026 210 Helicobacter pylori NQ4099 strain=NQ4099 na latest Contig Major Full 2012-06-28 ASM27456v1 Institute for Genome Sciences GCA_000274565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/565/GCF_000274565.1_ASM27456v1/ na na na haploid bacteria 1650644 1650644 39.000000 0 6 6 NCBI RefSeq GCF_000274565.1-RS_2026_04_26 2026-04-26 1583 1452 48 23661595 GCF_000274585.1 PRJNA224116 SAMN00777285 AKNX00000000.1 na 992029 210 Helicobacter pylori NQ4076 strain=NQ4076 na latest Contig Major Full 2012-06-28 ASM27458v1 Institute for Genome Sciences GCA_000274585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/585/GCF_000274585.1_ASM27458v1/ na na na haploid bacteria 1632709 1632709 39.000000 0 4 4 NCBI RefSeq GCF_000274585.1-RS_2026_04_25 2026-04-25 1576 1452 46 23661595 GCF_000274605.1 PRJNA224116 SAMN00777284 AKNV00000000.1 na 992027 210 Helicobacter pylori NQ4053 strain=NQ4053 na latest Contig Major Full 2012-06-28 ASM27460v1 Institute for Genome Sciences GCA_000274605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/605/GCF_000274605.1_ASM27460v1/ na na na haploid bacteria 1652030 1652030 39.000000 0 6 6 NCBI RefSeq GCF_000274605.1-RS_2026_07_02 2026-07-02 1600 1449 47 23661595 GCF_000274625.1 PRJNA224116 SAMN00777283 AKNW00000000.1 na 992028 210 Helicobacter pylori NQ4044 strain=NQ4044 na latest Contig Major Full 2012-06-28 ASM27462v1 Institute for Genome Sciences GCA_000274625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/625/GCF_000274625.1_ASM27462v1/ na na na haploid bacteria 1728524 1728524 38.500000 0 17 17 NCBI RefSeq GCF_000274625.1-RS_2026_01_14 2026-01-14 1678 1510 44 na GCF_000274645.2 PRJNA224116 SAMN00777266 AKNQ00000000.1 na 992022 210 Helicobacter pylori CPY6311 strain=CPY6311 na latest Contig Minor Full 2012-06-28 ASM27464v2 Institute for Genome Sciences GCA_000274645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/645/GCF_000274645.2_ASM27464v2/ na na na haploid bacteria 1591163 1591163 38.500000 0 8 8 NCBI RefSeq GCF_000274645.2-RS_2026_07_02 2026-07-02 1560 1417 42 23661595 GCF_000274665.1 PRJNA224116 SAMN00777263 AKNP00000000.1 na 992020 210 Helicobacter pylori CPY6271 strain=CPY6271 na latest Contig Major Full 2012-06-28 ASM27466v1 Institute for Genome Sciences GCA_000274665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/665/GCF_000274665.1_ASM27466v1/ na na na haploid bacteria 1602120 1602120 39.000000 0 8 8 NCBI RefSeq GCF_000274665.1-RS_2026_06_30 2026-06-30 1562 1419 46 23661595 GCF_000274745.1 PRJNA224116 SAMN00778892 AKQE00000000.1 na 992103 210 Helicobacter pylori Hp P-4d strain=Hp P-4d na latest Contig Major Full 2012-06-28 ASM27474v1 Institute for Genome Sciences GCA_000274745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/745/GCF_000274745.1_ASM27474v1/ na na na haploid bacteria 1682896 1682896 39.000000 0 9 9 NCBI RefSeq GCF_000274745.1-RS_2026_01_15 2026-01-15 1613 1478 47 na GCF_000274765.2 PRJNA224116 SAMN00778899 AKQG00000000.1 na 992105 210 Helicobacter pylori Hp P-8b strain=Hp P-8b na latest Contig Minor Full 2012-06-28 ASM27476v2 Institute for Genome Sciences GCA_000274765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/765/GCF_000274765.2_ASM27476v2/ na na na haploid bacteria 1619801 1619801 39.000000 0 5 5 NCBI RefSeq GCF_000274765.2-RS_2026_01_21 2026-01-21 1557 1432 46 na GCF_000274785.1 PRJNA224116 SAMN00778885 AKPI00000000.1 na 992072 210 Helicobacter pylori Hp P-1 strain=Hp P-1 na latest Contig Major Full 2012-06-28 ASM27478v1 Institute for Genome Sciences GCA_000274785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/785/GCF_000274785.1_ASM27478v1/ na na na haploid bacteria 1669637 1669637 39.000000 0 6 6 NCBI RefSeq GCF_000274785.1-RS_2025_04_21 2025-04-21 1599 1472 43 23661595 GCF_000274805.1 PRJNA224116 SAMN00778901 AKPJ00000000.1 na 992073 210 Helicobacter pylori Hp P-2 strain=Hp P-2 na latest Contig Major Full 2012-06-28 ASM27480v1 Institute for Genome Sciences GCA_000274805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/805/GCF_000274805.1_ASM27480v1/ na na na haploid bacteria 1693870 1693870 39.000000 0 6 6 NCBI RefSeq GCF_000274805.1-RS_2026_06_23 2026-06-23 1611 1483 40 23661595 GCF_000274825.2 PRJNA224116 SAMN00778880 AKPK00000000.1 na 992074 210 Helicobacter pylori Hp P-3 strain=Hp P-3 na latest Contig Minor Full 2012-06-28 ASM27482v2 Institute for Genome Sciences GCA_000274825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/825/GCF_000274825.2_ASM27482v2/ na na na haploid bacteria 1652009 1652009 39.000000 0 10 10 NCBI RefSeq GCF_000274825.2-RS_2026_04_26 2026-04-26 1583 1452 46 23661595 GCF_000274845.2 PRJNA224116 SAMN00778285 AKPL00000000.1 na 992075 210 Helicobacter pylori Hp P-4 strain=Hp P-4 na latest Contig Minor Full 2012-06-28 ASM27484v2 Institute for Genome Sciences GCA_000274845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/845/GCF_000274845.2_ASM27484v2/ na na na haploid bacteria 1693924 1693924 39.000000 0 8 8 NCBI RefSeq GCF_000274845.2-RS_2026_04_24 2026-04-24 1611 1489 47 23661595 GCF_000274885.2 PRJNA224116 SAMN00778918 AKQP00000000.1 na 992119 210 Helicobacter pylori Hp M3 strain=Hp M3 na latest Contig Minor Full 2012-06-28 ASM27488v2 Institute for Genome Sciences GCA_000274885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/885/GCF_000274885.2_ASM27488v2/ na na na haploid bacteria 1671515 1671515 39.000000 0 9 9 NCBI RefSeq GCF_000274885.2-RS_2026_01_21 2026-01-21 1607 1457 49 na GCF_000274905.1 PRJNA224116 SAMN00777289 AKNS00000000.1 na 992024 210 Helicobacter pylori NQ4200 strain=NQ4200 na latest Contig Major Full 2012-06-28 ASM27490v1 Institute for Genome Sciences GCA_000274905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/905/GCF_000274905.1_ASM27490v1/ na na na haploid bacteria 1646737 1646737 39.000000 0 14 14 NCBI RefSeq GCF_000274905.1-RS_2026_04_24 2026-04-24 1579 1458 45 23661595 GCF_000274925.1 PRJNA224116 SAMN00777291 AKNT00000000.1 na 992025 210 Helicobacter pylori NQ4228 strain=NQ4228 na latest Contig Major Full 2012-06-28 ASM27492v1 Institute for Genome Sciences GCA_000274925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/925/GCF_000274925.1_ASM27492v1/ na na na haploid bacteria 1653281 1653281 39.000000 0 6 6 NCBI RefSeq GCF_000274925.1-RS_2026_04_24 2026-04-24 1577 1459 45 23661595 GCF_000274945.2 PRJNA224116 SAMN00777290 AKNR00000000.1 na 992023 210 Helicobacter pylori NQ4216 strain=NQ4216 na latest Contig Minor Full 2012-06-28 ASM27494v2 Institute for Genome Sciences GCA_000274945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/945/GCF_000274945.2_ASM27494v2/ na na na haploid bacteria 1650078 1650078 39.000000 0 12 12 NCBI RefSeq GCF_000274945.2-RS_2026_06_29 2026-06-29 1614 1473 48 23661595 GCF_000274965.2 PRJNA224116 SAMN01818776 AKQN00000000.1 na 992117 210 Helicobacter pylori Hp M1 strain=Hp M1 na latest Contig Minor Full 2012-06-28 ASM27496v2 Institute for Genome Sciences GCA_000274965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/965/GCF_000274965.2_ASM27496v2/ na na na haploid bacteria 1655299 1655299 39.000000 0 8 8 NCBI RefSeq GCF_000274965.2-RS_2025_07_15 2025-07-15 1606 1465 46 na GCF_000274985.2 PRJNA224116 SAMN00778913 AKQO00000000.1 na 992118 210 Helicobacter pylori Hp M2 strain=Hp M2 na latest Contig Minor Full 2012-06-28 ASM27498v2 Institute for Genome Sciences GCA_000274985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/274/985/GCF_000274985.2_ASM27498v2/ na na na haploid bacteria 1659714 1659714 39.000000 0 10 10 NCBI RefSeq GCF_000274985.2-RS_2026_01_21 2026-01-21 1600 1463 43 na GCF_000275005.2 PRJNA224116 SAMN00778921 AKQS00000000.1 na 992122 210 Helicobacter pylori Hp M6 strain=Hp M6 na latest Contig Minor Full 2012-06-28 ASM27500v2 Institute for Genome Sciences GCA_000275005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/005/GCF_000275005.2_ASM27500v2/ na na na haploid bacteria 1664106 1664106 39.000000 0 10 10 NCBI RefSeq GCF_000275005.2-RS_2026_01_21 2026-01-21 1602 1461 45 na GCF_000275025.2 PRJNA224116 SAMN00778920 AKQR00000000.1 na 992121 210 Helicobacter pylori Hp M5 strain=Hp M5 na latest Contig Minor Full 2012-06-28 ASM27502v2 Institute for Genome Sciences GCA_000275025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/025/GCF_000275025.2_ASM27502v2/ na na na haploid bacteria 1667618 1667618 39.000000 0 6 6 NCBI RefSeq GCF_000275025.2-RS_2026_01_21 2026-01-21 1603 1459 47 na GCF_000275045.1 PRJNA224116 SAMN00778869 AKOB00000000.1 na 992033 210 Helicobacter pylori Hp A-5 strain=Hp A-5 na latest Contig Major Full 2012-06-28 ASM27504v1 Institute for Genome Sciences GCA_000275045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/045/GCF_000275045.1_ASM27504v1/ na na na haploid bacteria 1635925 1635925 39.000000 0 7 7 NCBI RefSeq GCF_000275045.1-RS_2026_04_26 2026-04-26 1578 1451 45 23661595 GCF_000275065.2 PRJNA224116 SAMN00778864 AKOC00000000.1 na 992034 210 Helicobacter pylori Hp A-9 strain=Hp A-9 na latest Contig Minor Full 2012-06-28 ASM27506v2 Institute for Genome Sciences GCA_000275065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/065/GCF_000275065.2_ASM27506v2/ na na na haploid bacteria 1714927 1714927 38.500000 0 17 17 NCBI RefSeq GCF_000275065.2-RS_2026_01_21 2026-01-21 1643 1493 45 na GCF_000275105.1 PRJNA224116 SAMN00778914 AKOH00000000.1 na 992040 210 Helicobacter pylori Hp H-27 strain=Hp H-27 na latest Contig Major Full 2012-06-28 ASM27510v1 Institute for Genome Sciences GCA_000275105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/105/GCF_000275105.1_ASM27510v1/ na na na haploid bacteria 1612044 1612044 39.000000 0 5 5 NCBI RefSeq GCF_000275105.1-RS_2026_04_30 2026-04-30 1570 1436 46 23661595 GCF_000275125.1 PRJNA224116 SAMN00778915 AKOI00000000.1 na 992041 210 Helicobacter pylori Hp H-28 strain=Hp H-28 na latest Contig Major Full 2012-06-28 ASM27512v1 Institute for Genome Sciences GCA_000275125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/125/GCF_000275125.1_ASM27512v1/ na na na haploid bacteria 1625000 1625000 39.000000 0 16 16 NCBI RefSeq GCF_000275125.1-RS_2026_02_17 2026-02-17 1581 1426 50 na GCF_000275145.2 PRJNA224116 SAMN00778897 AKQL00000000.1 na 992112 210 Helicobacter pylori Hp P-25d strain=Hp P-25d na latest Contig Minor Full 2012-06-28 ASM27514v2 Institute for Genome Sciences GCA_000275145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/145/GCF_000275145.2_ASM27514v2/ na na na haploid bacteria 1657665 1657665 39.000000 0 9 9 NCBI RefSeq GCF_000275145.2-RS_2026_01_21 2026-01-21 1599 1476 42 na GCF_000275165.1 PRJNA224116 SAMN00778861 AKOU00000000.1 na 992055 210 Helicobacter pylori Hp A-16 strain=Hp A-16 na latest Contig Major Full 2012-06-28 ASM27516v1 Institute for Genome Sciences GCA_000275165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/165/GCF_000275165.1_ASM27516v1/ na na na haploid bacteria 1637800 1637800 39.000000 0 11 11 NCBI RefSeq GCF_000275165.1-RS_2026_04_26 2026-04-26 1576 1451 45 23661595 GCF_000275245.2 PRJNA224116 SAMN00778852 AKOF00000000.1 na 992038 210 Helicobacter pylori Hp H-16 strain=Hp H-16 na latest Contig Minor Full 2012-06-28 ASM27524v2 Institute for Genome Sciences GCA_000275245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/245/GCF_000275245.2_ASM27524v2/ na na na haploid bacteria 1703959 1703959 39.000000 0 8 8 NCBI RefSeq GCF_000275245.2-RS_2025_04_21 2025-04-21 1625 1499 46 23661595 GCF_000275265.2 PRJNA224116 SAMN00778857 AKOD00000000.1 na 992036 210 Helicobacter pylori Hp A-17 strain=Hp A-17 na latest Contig Minor Full 2012-06-28 ASM27526v2 Institute for Genome Sciences GCA_000275265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/265/GCF_000275265.2_ASM27526v2/ na na na haploid bacteria 1636618 1636618 39.000000 0 5 5 NCBI RefSeq GCF_000275265.2-RS_2026_07_01 2026-07-01 1570 1423 48 23661595 GCF_000275285.1 PRJNA224116 SAMN00778862 AKOE00000000.1 na 992037 210 Helicobacter pylori Hp A-20 strain=Hp A-20 na latest Contig Major Full 2012-06-28 ASM27528v1 Institute for Genome Sciences GCA_000275285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/285/GCF_000275285.1_ASM27528v1/ na na na haploid bacteria 1674600 1674600 39.000000 0 10 10 NCBI RefSeq GCF_000275285.1-RS_2026_06_30 2026-06-30 1619 1473 48 23661595 GCF_000275305.2 PRJNA224116 SAMN00778868 AKOA00000000.1 na 992032 210 Helicobacter pylori Hp A-4 strain=Hp A-4 na latest Contig Minor Full 2012-06-28 ASM27530v2 Institute for Genome Sciences GCA_000275305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/305/GCF_000275305.2_ASM27530v2/ na na na haploid bacteria 1663998 1663998 39.000000 0 8 8 NCBI RefSeq GCF_000275305.2-RS_2026_06_23 2026-06-23 1608 1476 42 23661595 GCF_000275325.1 PRJNA224116 SAMN00778859 AKPB00000000.1 na 992063 210 Helicobacter pylori Hp H-10 strain=Hp H-10 na latest Contig Major Full 2012-06-28 ASM27532v1 Institute for Genome Sciences GCA_000275325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/325/GCF_000275325.1_ASM27532v1/ na na na haploid bacteria 1649818 1649818 39.000000 0 32 32 NCBI RefSeq GCF_000275325.1-RS_2026_01_12 2026-01-12 1600 1440 50 na GCF_000275345.2 PRJNA224116 SAMN00778909 AKQM00000000.1 na 992114 210 Helicobacter pylori Hp P-28b strain=Hp P-28b na latest Contig Minor Full 2012-06-28 ASM27534v2 Institute for Genome Sciences GCA_000275345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/345/GCF_000275345.2_ASM27534v2/ na na na haploid bacteria 1619904 1619904 39.000000 0 11 11 NCBI RefSeq GCF_000275345.2-RS_2026_01_21 2026-01-21 1566 1420 49 na GCF_000275365.2 PRJNA224116 SAMN00778910 AKQD00000000.1 na 992102 210 Helicobacter pylori Hp P-4c strain=Hp P-4c na latest Contig Minor Full 2012-06-28 ASM27536v2 Institute for Genome Sciences GCA_000275365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/365/GCF_000275365.2_ASM27536v2/ na na na haploid bacteria 1678285 1678285 39.000000 0 7 7 NCBI RefSeq GCF_000275365.2-RS_2026_01_21 2026-01-21 1609 1479 44 na GCF_000275405.2 PRJNA224116 SAMN00778871 AKPU00000000.1 na 992087 210 Helicobacter pylori Hp P-30 strain=Hp P-30 na latest Contig Minor Full 2012-06-28 ASM27540v2 Institute for Genome Sciences GCA_000275405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/405/GCF_000275405.2_ASM27540v2/ na na na haploid bacteria 1639810 1639810 39.000000 0 4 4 NCBI RefSeq GCF_000275405.2-RS_2026_04_24 2026-04-24 1576 1453 48 23661595 GCF_000275425.2 PRJNA224116 SAMN00778891 AKPV00000000.1 na 992088 210 Helicobacter pylori Hp P-41 strain=Hp P-41 na latest Contig Minor Full 2012-06-28 ASM27542v2 Institute for Genome Sciences GCA_000275425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/425/GCF_000275425.2_ASM27542v2/ na na na haploid bacteria 1712112 1712112 39.000000 0 9 9 NCBI RefSeq GCF_000275425.2-RS_2025_04_21 2025-04-21 1649 1487 51 23661595 GCF_000275445.2 PRJNA224116 SAMN00778916 AKPW00000000.1 na 992089 210 Helicobacter pylori Hp P-62 strain=Hp P-62 na latest Contig Minor Full 2012-06-28 ASM27544v2 Institute for Genome Sciences GCA_000275445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/445/GCF_000275445.2_ASM27544v2/ na na na haploid bacteria 1648336 1648336 39.000000 0 12 12 NCBI RefSeq GCF_000275445.2-RS_2026_06_24 2026-06-24 1589 1449 46 23661595 GCF_000275485.2 PRJNA224116 SAMN00778882 AKQT00000000.1 na 992125 210 Helicobacter pylori Hp M9 strain=Hp M9 na latest Contig Minor Full 2012-06-28 ASM27548v2 Institute for Genome Sciences GCA_000275485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/485/GCF_000275485.2_ASM27548v2/ na na na haploid bacteria 1658934 1658934 39.000000 0 10 10 NCBI RefSeq GCF_000275485.2-RS_2026_02_17 2026-02-17 1595 1458 46 na GCF_000275505.2 PRJNA224116 SAMN00778870 AKQB00000000.1 na 992099 210 Helicobacter pylori Hp P-2b strain=Hp P-2b na latest Contig Minor Full 2012-06-28 ASM27550v2 Institute for Genome Sciences GCA_000275505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/505/GCF_000275505.2_ASM27550v2/ na na na haploid bacteria 1709344 1709344 39.000000 0 6 6 NCBI RefSeq GCF_000275505.2-RS_2026_01_21 2026-01-21 1617 1482 47 na GCF_000275525.2 PRJNA224116 SAMN00778903 AKQC00000000.1 na 992100 210 Helicobacter pylori Hp P-3b strain=Hp P-3b na latest Contig Minor Full 2012-06-28 ASM27552v2 Institute for Genome Sciences GCA_000275525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/525/GCF_000275525.2_ASM27552v2/ na na na haploid bacteria 1657332 1657332 39.000000 0 8 8 NCBI RefSeq GCF_000275525.2-RS_2026_01_21 2026-01-21 1578 1445 49 na GCF_000275545.2 PRJNA224116 SAMN00778919 AKQQ00000000.1 na 992120 210 Helicobacter pylori Hp M4 strain=Hp M4 na latest Contig Minor Full 2012-06-28 ASM27554v2 Institute for Genome Sciences GCA_000275545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/545/GCF_000275545.2_ASM27554v2/ na na na haploid bacteria 1666380 1666380 39.000000 0 9 9 NCBI RefSeq GCF_000275545.2-RS_2026_01_21 2026-01-21 1599 1453 47 na GCF_000275565.2 PRJNA224116 SAMN00778878 AKPZ00000000.1 na 992095 210 Helicobacter pylori Hp H-24c strain=Hp H-24c na latest Contig Minor Full 2012-06-28 ASM27556v2 Institute for Genome Sciences GCA_000275565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/565/GCF_000275565.2_ASM27556v2/ na na na haploid bacteria 1668441 1668441 39.000000 0 8 8 NCBI RefSeq GCF_000275565.2-RS_2026_01_21 2026-01-21 1601 1457 48 na GCF_000275585.2 PRJNA224116 SAMN00778860 AKPY00000000.1 na 992094 210 Helicobacter pylori Hp H-24b strain=Hp H-24b na latest Contig Minor Full 2012-06-28 ASM27558v2 Institute for Genome Sciences GCA_000275585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/585/GCF_000275585.2_ASM27558v2/ na na na haploid bacteria 1664131 1664131 39.000000 0 9 9 NCBI RefSeq GCF_000275585.2-RS_2026_01_21 2026-01-21 1602 1451 47 na GCF_000275605.1 PRJNA224116 SAMN02603219 na na 1185654 2261 Pyrococcus furiosus COM1 strain=COM1 na latest Complete Genome Major Full 2012-06-29 ASM27560v1 ENIGMA- Ecosystems and Networks Integrated with Genes and Molecular Assemblies GCA_000275605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/605/GCF_000275605.1_ASM27560v1/ na na na haploid archaea 1909827 1909827 41.000000 1 1 1 NCBI RefSeq GCF_000275605.1-RS_2025_12_03 2025-12-03 2150 2031 63 22636780 GCF_000275625.1 PRJNA224116 SAMN02471172 AFRY00000000.1 na 1048264 1314 Streptococcus pyogenes HKU QMH11M0907901 strain=HKU QMH11M0907901 na latest Complete Genome Major Full 2012-05-18 ASM27562v1 Department of Microbiology, The University of Hong Kong GCA_000275625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/625/GCF_000275625.1_ASM27562v1/ na na na haploid bacteria 1908100 1908100 38.500000 1 1 1 NCBI RefSeq GCF_000275625.1-RS_2026_01_14 2026-01-14 1903 1751 89 na GCF_000275645.1 PRJNA224116 SAMN02470784 AKGH00000000.1 na 1093790 666 Vibrio cholerae H1 strain=H1 na latest Complete Genome Major Full 2012-06-29 ASM27564v1 Pacific Biosciences GCA_000275645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/645/GCF_000275645.1_ASM27564v1/ na na na haploid bacteria 4089020 4089020 47.500000 2 2 2 NCBI RefSeq GCF_000275645.1-RS_2026_02_17 2026-02-17 3733 3559 106 na GCF_000275685.1 PRJNA224116 SAMN02402990 AKVQ00000000.1 na 1194970 632 Yersinia pestis 2501 strain=2501 na latest Scaffold Major Full 2012-07-09 ASM27568v1 BGI GCA_000275685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/685/GCF_000275685.1_ASM27568v1/ na na na haploid bacteria 4597322 4593919 47.500000 0 185 201 NCBI RefSeq GCF_000275685.1-RS_2026_03_20 2026-03-20 4207 3913 78 22965078 GCF_000275705.1 PRJNA224116 SAMN02469854 AKIH00000000.1 na 1191522 669 Vibrio harveyi ZJ0603 strain=ZJ0603 na latest Scaffold Major Full 2012-07-09 VibHar1.0 Fisheries College, Guangdong Ocean University GCA_000275705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/705/GCF_000275705.1_VibHar1.0/ na na na haploid bacteria 6697981 6658661 44.500000 0 65 206 NCBI RefSeq GCF_000275705.1-RS_2026_03_20 2026-03-20 6337 6080 103 23144396 GCF_000275725.1 PRJNA224116 SAMN02472261 AJTS00000000.1 na 1177117 502821 Vreelandella stevensii S18214 strain=S18214 na latest Contig Major Full 2012-07-02 162.HSS18214.1 Korea Research Institute of Bioscience and Biotechnology GCA_000275725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/725/GCF_000275725.1_162.HSS18214.1/ na assembly from type material na haploid bacteria 3693745 3693745 60.000000 0 53 53 NCBI RefSeq GCF_000275725.1-RS_2025_08_25 2025-08-25 3522 3384 76 22933767 GCF_000275785.1 PRJNA224116 SAMN02470110 AFSU00000000.1 na 1007654 1007654 Bacillus sp. 916 strain=916 na latest Contig Major Full 2012-07-06 ASM27578v1 Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences GCA_000275785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/785/GCF_000275785.1_ASM27578v1/ na na na haploid bacteria 3931278 3931278 46.500000 0 139 139 NCBI RefSeq GCF_000275785.1-RS_2024_03_27 2024-03-27 3936 3786 58 22965091 GCF_000275805.1 PRJNA224116 SAMN02463874 AGZS00000000.1 na 857290 230143 Scardovia wiggsiae F0424 strain=F0424 na latest Scaffold Major Full 2012-07-12 Scar_wigg_F0424_V1 Broad Institute GCA_000275805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/805/GCF_000275805.1_Scar_wigg_F0424_V1/ na na na haploid bacteria 1555498 1552186 53.000000 0 2 6 NCBI RefSeq GCF_000275805.1-RS_2025_12_22 2025-12-22 1287 1213 58 na GCF_000275825.1 PRJNA224116 SAMN02261388 AGRT00000000.1 na 694433 1008 Saprospira grandis DSM 2844 strain=DSM 2844 na latest Scaffold Major Full 2012-07-12 ASM27582v1 JGI GCA_000275825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/825/GCF_000275825.1_ASM27582v1/ na na na haploid bacteria 4495250 4488150 46.000000 0 5 76 NCBI RefSeq GCF_000275825.1-RS_2025_07_23 2025-07-23 3482 3378 60 22768364 GCF_000275845.1 PRJNA242541 SAMN02981282 AEID00000000.1 reference genome 732165 114155 Dichomitus squalens LYAD-421 SS1 strain=LYAD-421 SS1 na latest Scaffold Major Full 2012-07-12 Dichomitus squalens v1.0 JGI GCA_000275845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/845/GCF_000275845.1_Dichomitus_squalens_v1.0/ na na na haploid fungi 42748430 39457462 55.500000 0 542 1865 JGI Annotation submitted by JGI 2020-02-04 12497 12275 214 22745431 GCF_000275865.1 PRJNA224116 SAMN02256542 AGCO00000000.1 reference genome 28892 2201 Methanofollis liminatans DSM 4140 strain=DSM 4140 na latest Chromosome Major Full 2012-07-13 ASM27586v1 DOE Joint Genome Institute GCA_000275865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/865/GCF_000275865.1_ASM27586v1/ na assembly from type material na haploid archaea 2475100 2474500 61.000000 1 1 7 NCBI RefSeq GCF_000275865.1-RS_2025_11_21 2025-11-21 2496 2430 58 na GCF_000275945.1 PRJNA224116 SAMN02471736 AJXI00000000.1 na 1189622 47877 Pseudomonas amygdali pv. tabaci str. 6605 strain=6605 na latest Contig Major Full 2012-07-09 ASM27594v1 University of Exeter GCA_000275945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/945/GCF_000275945.1_ASM27594v1/ na na na haploid bacteria 6159286 6159286 58.000000 0 283 283 NCBI RefSeq GCF_000275945.1-RS_2025_08_05 2025-08-05 5611 5182 55 na GCF_000275965.1 PRJNA224116 SAMN00993392 AKHL00000000.1 na 1155130 1282 Staphylococcus epidermidis NIH051475 strain=NIH051475 na latest Contig Major Full 2012-07-09 ASM27596v1 NIH-NISC GCA_000275965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/965/GCF_000275965.1_ASM27596v1/ na na na haploid bacteria 2508563 2508563 32.000000 0 91 91 NCBI RefSeq GCF_000275965.1-RS_2026_02_17 2026-02-17 2466 2257 87 na GCF_000275985.2 PRJNA224116 SAMN00993214 AKHK00000000.1 na 1155131 1282 Staphylococcus epidermidis NIH051668 strain=NIH051668 na latest Contig Major Full 2012-07-09 ASM27598v2 NIH-NISC GCA_000275985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/275/985/GCF_000275985.2_ASM27598v2/ na na na haploid bacteria 2692950 2692950 32.000000 0 73 73 NCBI RefSeq GCF_000275985.2-RS_2026_02_17 2026-02-17 2691 2454 85 na GCF_000276005.1 PRJNA224116 SAMN00993757 AKHJ00000000.1 na 1155132 1282 Staphylococcus epidermidis NIH04003 strain=NIH04003 na latest Contig Major Full 2012-07-09 ASM27600v1 NIH-NISC GCA_000276005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/005/GCF_000276005.1_ASM27600v1/ na na na haploid bacteria 2493358 2493358 32.000000 0 61 61 NCBI RefSeq GCF_000276005.1-RS_2026_02_17 2026-02-17 2421 2227 86 na GCF_000276025.1 PRJNA224116 SAMN00993648 AKHI00000000.1 na 1155133 1282 Staphylococcus epidermidis NIH05003 strain=NIH05003 na latest Contig Major Full 2012-07-09 ASM27602v1 NIH-NISC GCA_000276025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/025/GCF_000276025.1_ASM27602v1/ na na na haploid bacteria 2412258 2412258 32.000000 0 66 66 NCBI RefSeq GCF_000276025.1-RS_2026_02_17 2026-02-17 2343 2161 82 na GCF_000276045.1 PRJNA224116 SAMN00993391 AKHH00000000.1 na 1155134 1282 Staphylococcus epidermidis NIH06004 strain=NIH06004 na latest Contig Major Full 2012-07-09 ASM27604v1 NIH-NISC GCA_000276045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/045/GCF_000276045.1_ASM27604v1/ na na na haploid bacteria 2616841 2616841 32.000000 0 76 76 NCBI RefSeq GCF_000276045.1-RS_2026_02_17 2026-02-17 2591 2368 81 na GCF_000276065.1 PRJNA224116 SAMN00993450 AKHG00000000.1 na 1155135 1282 Staphylococcus epidermidis NIH08001 strain=NIH08001 na latest Contig Major Full 2012-07-09 ASM27606v1 NIH-NISC GCA_000276065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/065/GCF_000276065.1_ASM27606v1/ na na na haploid bacteria 2509449 2509449 32.000000 0 68 68 NCBI RefSeq GCF_000276065.1-RS_2026_02_17 2026-02-17 2474 2277 82 na GCF_000276085.1 PRJNA224116 SAMN00993294 AKHF00000000.1 na 979222 1282 Staphylococcus epidermidis NIH04008 strain=NIH04008 na latest Contig Major Full 2012-07-09 ASM27608v1 NISC - NIH Intramural Sequencing Center GCA_000276085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/085/GCF_000276085.1_ASM27608v1/ na na na haploid bacteria 2737591 2737591 32.000000 0 130 130 NCBI RefSeq GCF_000276085.1-RS_2026_02_17 2026-02-17 2774 2511 80 na GCF_000276105.1 PRJNA224116 SAMN00993295 AKHE00000000.1 na 979221 1282 Staphylococcus epidermidis NIH05001 strain=NIH05001 na latest Contig Major Full 2012-07-09 ASM27610v1 NISC - NIH Intramural Sequencing Center GCA_000276105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/105/GCF_000276105.1_ASM27610v1/ na na na haploid bacteria 2618961 2618961 32.000000 0 174 174 NCBI RefSeq GCF_000276105.1-RS_2026_02_17 2026-02-17 2690 2417 94 na GCF_000276125.1 PRJNA224116 SAMN00993293 AKHD00000000.1 na 979220 1282 Staphylococcus epidermidis NIH05005 strain=NIH05005 na latest Contig Major Full 2012-07-09 ASM27612v1 NISC - NIH Intramural Sequencing Center GCA_000276125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/125/GCF_000276125.1_ASM27612v1/ na na na haploid bacteria 2493175 2493175 32.000000 0 73 73 NCBI RefSeq GCF_000276125.1-RS_2026_02_17 2026-02-17 2442 2252 85 na GCF_000276145.1 PRJNA224116 SAMN00993289 AKHC00000000.1 na 979219 1282 Staphylococcus epidermidis NIHLM001 strain=NIHLM001 na latest Contig Major Full 2012-07-09 ASM27614v1 NISC - NIH Intramural Sequencing Center GCA_000276145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/145/GCF_000276145.1_ASM27614v1/ na na na haploid bacteria 2615862 2615862 32.000000 0 87 87 NCBI RefSeq GCF_000276145.1-RS_2026_02_17 2026-02-17 2628 2340 92 na GCF_000276165.1 PRJNA224116 SAMN00993288 AKHB00000000.1 na 979218 1282 Staphylococcus epidermidis NIHLM003 strain=NIHLM003 na latest Contig Major Full 2012-07-09 ASM27616v1 NISC - NIH Intramural Sequencing Center GCA_000276165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/165/GCF_000276165.1_ASM27616v1/ na na na haploid bacteria 2597302 2597302 32.000000 0 72 72 NCBI RefSeq GCF_000276165.1-RS_2026_02_17 2026-02-17 2582 2395 88 na GCF_000276185.1 PRJNA224116 SAMN00993290 AKHA00000000.1 na 979217 1282 Staphylococcus epidermidis NIHLM008 strain=NIHLM008 na latest Contig Major Full 2012-07-09 ASM27618v1 NISC - NIH Intramural Sequencing Center GCA_000276185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/185/GCF_000276185.1_ASM27618v1/ na na na haploid bacteria 2449539 2449539 32.000000 0 45 45 NCBI RefSeq GCF_000276185.1-RS_2026_02_17 2026-02-17 2392 2196 92 na GCF_000276205.1 PRJNA224116 SAMN00993292 AKGZ00000000.1 na 979216 1282 Staphylococcus epidermidis NIHLM015 strain=NIHLM015 na latest Contig Major Full 2012-07-09 ASM27620v1 NISC - NIH Intramural Sequencing Center GCA_000276205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/205/GCF_000276205.1_ASM27620v1/ na na na haploid bacteria 2446363 2446363 32.000000 0 43 43 NCBI RefSeq GCF_000276205.1-RS_2026_02_17 2026-02-17 2391 2212 96 na GCF_000276225.1 PRJNA224116 SAMN00993287 AKGY00000000.1 na 979215 1282 Staphylococcus epidermidis NIHLM018 strain=NIHLM018 na latest Contig Major Full 2012-07-09 ASM27622v1 NISC - NIH Intramural Sequencing Center GCA_000276225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/225/GCF_000276225.1_ASM27622v1/ na na na haploid bacteria 2477738 2477738 32.000000 0 64 64 NCBI RefSeq GCF_000276225.1-RS_2026_02_17 2026-02-17 2450 2257 89 na GCF_000276245.1 PRJNA224116 SAMN00993286 AKGX00000000.1 na 979214 1282 Staphylococcus epidermidis NIHLM031 strain=NIHLM031 na latest Contig Major Full 2012-07-09 ASM27624v1 NISC - NIH Intramural Sequencing Center GCA_000276245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/245/GCF_000276245.1_ASM27624v1/ na na na haploid bacteria 2533930 2533930 32.000000 0 64 64 NCBI RefSeq GCF_000276245.1-RS_2026_02_17 2026-02-17 2504 2255 98 na GCF_000276265.1 PRJNA224116 SAMN00993291 AKGW00000000.1 na 979213 1282 Staphylococcus epidermidis NIHLM020 strain=NIHLM020 na latest Contig Major Full 2012-07-09 ASM27626v1 NISC - NIH Intramural Sequencing Center GCA_000276265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/265/GCF_000276265.1_ASM27626v1/ na na na haploid bacteria 2376856 2376856 32.000000 0 64 64 NCBI RefSeq GCF_000276265.1-RS_2026_02_17 2026-02-17 2323 2093 84 na GCF_000276285.1 PRJNA224116 SAMN00993238 AKGV00000000.1 na 979212 1282 Staphylococcus epidermidis NIHLM021 strain=NIHLM021 na latest Contig Major Full 2012-07-09 ASM27628v1 NISC - NIH Intramural Sequencing Center GCA_000276285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/285/GCF_000276285.1_ASM27628v1/ na na na haploid bacteria 2495317 2495317 32.000000 0 72 72 NCBI RefSeq GCF_000276285.1-RS_2026_02_17 2026-02-17 2481 2245 90 na GCF_000276305.1 PRJNA224116 SAMN00993233 AKGU00000000.1 na 979211 1282 Staphylococcus epidermidis NIHLM023 strain=NIHLM023 na latest Contig Major Full 2012-07-09 ASM27630v1 NISC - NIH Intramural Sequencing Center GCA_000276305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/305/GCF_000276305.1_ASM27630v1/ na na na haploid bacteria 2542440 2542440 32.000000 0 87 87 NCBI RefSeq GCF_000276305.1-RS_2026_02_17 2026-02-17 2517 2291 89 na GCF_000276325.1 PRJNA224116 SAMN00993246 AKGT00000000.1 na 979210 1282 Staphylococcus epidermidis NIHLM037 strain=NIHLM037 na latest Contig Major Full 2012-07-09 ASM27632v1 NISC - NIH Intramural Sequencing Center GCA_000276325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/325/GCF_000276325.1_ASM27632v1/ na na na haploid bacteria 2469355 2469355 32.000000 0 68 68 NCBI RefSeq GCF_000276325.1-RS_2026_02_17 2026-02-17 2405 2191 88 na GCF_000276345.1 PRJNA224116 SAMN00993248 AKGS00000000.1 na 979209 1282 Staphylococcus epidermidis NIHLM039 strain=NIHLM039 na latest Contig Major Full 2012-07-09 ASM27634v1 NISC - NIH Intramural Sequencing Center GCA_000276345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/345/GCF_000276345.1_ASM27634v1/ na na na haploid bacteria 2523728 2523728 32.000000 0 66 66 NCBI RefSeq GCF_000276345.1-RS_2026_02_17 2026-02-17 2486 2292 80 na GCF_000276365.1 PRJNA224116 SAMN00993236 AKGR00000000.1 na 979208 1282 Staphylococcus epidermidis NIHLM040 strain=NIHLM040 na latest Contig Major Full 2012-07-09 ASM27636v1 NISC - NIH Intramural Sequencing Center GCA_000276365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/365/GCF_000276365.1_ASM27636v1/ na na na haploid bacteria 2557795 2557795 32.000000 0 62 62 NCBI RefSeq GCF_000276365.1-RS_2025_02_17 2025-02-17 2523 2308 85 na GCF_000276385.1 PRJNA224116 SAMN00993261 AKGQ00000000.1 na 979207 1282 Staphylococcus epidermidis NIHLM049 strain=NIHLM049 na latest Contig Major Full 2012-07-09 ASM27638v1 NISC - NIH Intramural Sequencing Center GCA_000276385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/385/GCF_000276385.1_ASM27638v1/ na na na haploid bacteria 2479969 2479969 32.000000 0 56 56 NCBI RefSeq GCF_000276385.1-RS_2025_02_17 2025-02-17 2449 2270 89 na GCF_000276405.1 PRJNA224116 SAMN00993262 AKGP00000000.1 na 979206 1282 Staphylococcus epidermidis NIHLM053 strain=NIHLM053 na latest Contig Major Full 2012-07-09 ASM27640v1 NISC - NIH Intramural Sequencing Center GCA_000276405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/405/GCF_000276405.1_ASM27640v1/ na na na haploid bacteria 2555640 2555640 32.000000 0 129 129 NCBI RefSeq GCF_000276405.1-RS_2024_04_28 2024-04-28 2575 2295 82 na GCF_000276425.1 PRJNA224116 SAMN00993232 AKGO00000000.1 na 979205 1282 Staphylococcus epidermidis NIHLM057 strain=NIHLM057 na latest Contig Major Full 2012-07-09 ASM27642v1 NISC - NIH Intramural Sequencing Center GCA_000276425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/425/GCF_000276425.1_ASM27642v1/ na na na haploid bacteria 2544355 2544355 32.000000 0 104 104 NCBI RefSeq GCF_000276425.1-RS_2026_02_17 2026-02-17 2546 2302 90 na GCF_000276445.1 PRJNA224116 SAMN00993260 AKGN00000000.1 na 979204 1282 Staphylococcus epidermidis NIHLM061 strain=NIHLM061 na latest Contig Major Full 2012-07-09 ASM27644v1 NISC - NIH Intramural Sequencing Center GCA_000276445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/445/GCF_000276445.1_ASM27644v1/ na na na haploid bacteria 2586093 2586093 32.000000 0 61 61 NCBI RefSeq GCF_000276445.1-RS_2025_02_17 2025-02-17 2537 2356 87 na GCF_000276465.1 PRJNA224116 SAMN00993237 AKGM00000000.1 na 979203 1282 Staphylococcus epidermidis NIHLM067 strain=NIHLM067 na latest Contig Major Full 2012-07-09 ASM27646v1 NISC - NIH Intramural Sequencing Center GCA_000276465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/465/GCF_000276465.1_ASM27646v1/ na na na haploid bacteria 2399040 2399040 32.000000 0 51 51 NCBI RefSeq GCF_000276465.1-RS_2025_02_17 2025-02-17 2360 2169 89 na GCF_000276505.1 PRJNA224116 SAMN00991849 AKGK00000000.1 na 979201 1282 Staphylococcus epidermidis NIHLM087 strain=NIHLM087 na latest Contig Major Full 2012-07-09 ASM27650v1 NISC - NIH Intramural Sequencing Center GCA_000276505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/505/GCF_000276505.1_ASM27650v1/ na na na haploid bacteria 2489992 2489992 32.000000 0 72 72 NCBI RefSeq GCF_000276505.1-RS_2025_02_17 2025-02-17 2434 2271 90 na GCF_000276545.1 PRJNA224116 SAMN00991838 AKGI00000000.1 na 979199 1282 Staphylococcus epidermidis NIHLM095 strain=NIHLM095 na latest Contig Major Full 2012-07-09 ASM27654v1 NISC - NIH Intramural Sequencing Center GCA_000276545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/545/GCF_000276545.1_ASM27654v1/ na na na haploid bacteria 2476151 2476151 32.000000 0 39 39 NCBI RefSeq GCF_000276545.1-RS_2025_02_17 2025-02-17 2428 2213 84 na GCF_000276565.1 PRJNA224116 SAMN02471724 AJXG00000000.1 na 1030145 29442 Pseudomonas tolaasii PMS117 strain=PMS117 na latest Contig Major Full 2012-07-09 ASM27656v1 University of Exeter GCA_000276565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/565/GCF_000276565.1_ASM27656v1/ na na na haploid bacteria 7007821 7007821 60.000000 0 357 357 NCBI RefSeq GCF_000276565.1-RS_2025_08_01 2025-08-01 6487 6166 59 na GCF_000276605.1 PRJNA224116 SAMN00839625 AKJX00000000.1 na 1144317 1144317 Acidovorax sp. CF316 strain=CF316 na latest Contig Major Full 2012-07-09 Acidovorax.strCF316_v1.0 Oak Ridge National Lab GCA_000276605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/605/GCF_000276605.1_Acidovorax.strCF316_v1.0/ na na na haploid bacteria 7086227 7086227 68.000000 0 315 315 NCBI RefSeq GCF_000276605.1-RS_2024_08_13 2024-08-13 6803 6639 59 23045501 GCF_000276625.1 PRJNA224116 SAMN02471776 AKYW00000000.1 na 1182756 1280 Staphylococcus aureus subsp. aureus str. Newbould 305 strain=Newbould 305 na latest Contig Major Full 2012-07-09 Newbould305 assembly v1 Geneva University Hospital GCA_000276625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/625/GCF_000276625.1_Newbould305_assembly_v1/ na na na haploid bacteria 2790393 2790393 33.000000 1 28 28 NCBI RefSeq GCF_000276625.1-RS_2025_04_15 2025-04-15 2808 2627 90 23105046 GCF_000276645.1 PRJNA224116 SAMN02470699 AKXJ00000000.1 na 493915 493915 Pseudoalteromonas sp. NJ631 strain=NJ631 na latest Contig Major Full 2012-07-09 ASM27664v1 Ningbo University GCA_000276645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/645/GCF_000276645.1_ASM27664v1/ na na na haploid bacteria 5349905 5349905 43.500000 0 55 55 NCBI RefSeq GCF_000276645.1-RS_2025_08_25 2025-08-25 4679 4535 107 na GCF_000276685.1 PRJNA224116 SAMN02604145 na na 743973 29575 Taylorella equigenitalis ATCC 35865 strain=ATCC 35865 na latest Complete Genome Major Full 2012-07-09 ASM27668v1 University of Bristol GCA_000276685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/685/GCF_000276685.1_ASM27668v1/ na assembly from type material na haploid bacteria 1732123 1732123 37.500000 1 1 1 NCBI RefSeq GCF_000276685.1-RS_2025_12_23 2025-12-23 1628 1557 50 22541164 GCF_000276705.2 PRJNA224116 SAMN02603642 na na 1191061 1134687 Klebsiella michiganensis E718 strain=E718 na latest Complete Genome Major Full 2012-07-10 ASM27670v2 National Chung Hsing University GCA_000276705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/705/GCF_000276705.2_ASM27670v2/ na na na haploid bacteria 6561678 6561678 55.500000 3 3 3 NCBI RefSeq GCF_000276705.2-RS_2026_03_03 2026-03-03 6359 5978 117 22965083;23752513 GCF_000276745.1 PRJNA224116 SAMN00996410 AKAV00000000.1 na 1165942 562 Escherichia coli O111:H8 str. CVM9602 strain=CVM9602 na latest Contig Major Full 2012-07-09 EC_O111:H8_CVM9602_v01 FDA GCA_000276745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/745/GCF_000276745.1_EC_O111_H8_CVM9602_v01/ na na na haploid bacteria 5099222 5099222 50.500000 0 268 268 NCBI RefSeq GCF_000276745.1-RS_2025_06_09 2025-06-09 5326 4856 99 23052305 GCF_000276765.1 PRJNA224116 SAMN00996417 AKAW00000000.1 na 1165944 562 Escherichia coli O111:H8 str. CVM9634 strain=CVM9634 na latest Contig Major Full 2012-07-09 EC_O111:H8_CVM9634_1.0 FDA GCA_000276765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/765/GCF_000276765.1_EC_O111_H8_CVM9634_1.0/ na na na haploid bacteria 5767717 5767717 50.500000 0 454 454 NCBI RefSeq GCF_000276765.1-RS_2025_06_09 2025-06-09 6227 5616 109 23052305 GCF_000276785.1 PRJNA224116 SAMN00996446 AKBB00000000.1 na 1165953 562 Escherichia coli O26:H11 str. CVM10224 strain=CVM10224 na latest Contig Major Full 2012-07-09 EC_O26:H11_CVM10224_1.0 FDA GCA_000276785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/785/GCF_000276785.1_EC_O26_H11_CVM10224_1.0/ na na na haploid bacteria 5337511 5337511 50.500000 0 354 354 NCBI RefSeq GCF_000276785.1-RS_2025_06_13 2025-06-13 5661 5185 107 na GCF_000276805.1 PRJNA224116 SAMN02470165 AKXQ00000000.1 reference genome 1201293 428031 Moritella dasanensis ArB 0140 strain=ArB 0140 na latest Contig Major Full 2012-07-09 ASM27680v1 Korea Polar Research Institute GCA_000276805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/805/GCF_000276805.1_ASM27680v1/ na assembly from type material na haploid bacteria 4889582 4889582 41.000000 0 61 61 NCBI RefSeq GCF_000276805.1-RS_2026_03_20 2026-03-20 4341 4210 100 22965082 GCF_000276825.1 PRJNA224116 SAMN02603185 na reference genome 1138383 1138383 Mycobacterium paraintracellulare strain=MOTT64 na latest Complete Genome Major Full 2012-02-29 ASM27682v1 Department of Microbiology and Immunology, Seoul National University GCA_000276825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/825/GCF_000276825.1_ASM27682v1/ na assembly from type material na haploid bacteria 5501090 5501090 68.000000 1 1 1 NCBI RefSeq GCF_000276825.1-RS_2025_12_11 2025-12-11 5184 5051 52 22628501 GCF_000276845.1 PRJNA224116 SAMN00996445 AKBA00000000.1 na 1165952 562 Escherichia coli O26:H11 str. CVM10030 strain=CVM10030 na latest Contig Major Full 2012-07-09 EC_O26:H11_CVM10030_1.0 FDA GCA_000276845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/845/GCF_000276845.1_EC_O26_H11_CVM10030_1.0/ na na na haploid bacteria 5492997 5492997 50.500000 0 473 473 NCBI RefSeq GCF_000276845.1-RS_2025_04_26 2025-04-26 5890 5306 102 23052305 GCF_000276865.1 PRJNA224116 SAMN00996418 AKAX00000000.1 na 1165939 562 Escherichia coli O111:H11 str. CVM9455 strain=CVM9455 na latest Contig Major Full 2012-07-09 EC_O111_CVM9455_1.0 FDA GCA_000276865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/865/GCF_000276865.1_EC_O111_CVM9455_1.0/ na na na haploid bacteria 6002113 6002113 50.000000 0 845 845 NCBI RefSeq GCF_000276865.1-RS_2025_06_09 2025-06-09 6720 5867 104 23052305 GCF_000276885.1 PRJNA224116 SAMN00996447 AKBC00000000.1 na 1163738 562 Escherichia coli O26:H11 str. CVM9952 strain=CVM9952 na latest Contig Major Full 2012-07-09 EC_O26:H11_CVM9952_1.0 US Food and Drug Administration GCA_000276885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/885/GCF_000276885.1_EC_O26_H11_CVM9952_1.0/ na na na haploid bacteria 5497155 5497155 50.500000 0 442 442 NCBI RefSeq GCF_000276885.1-RS_2025_03_23 2025-03-23 5867 5313 92 23052305 GCF_000276905.1 PRJNA224116 SAMN02471469 AKKT00000000.1 na 1046596 1618 Liquorilactobacillus mali KCTC 3596 = DSM 20444 strain=DSM 20444 na latest Contig Major Full 2012-07-09 LmaliDSM20444T Microbiology Dept, University College Cork GCA_000276905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/905/GCF_000276905.1_LmaliDSM20444T/ na assembly from type material na haploid bacteria 2149363 2149363 36.000000 0 196 196 NCBI RefSeq GCF_000276905.1-RS_2025_12_05 2025-12-05 2185 2060 33 na GCF_000276925.1 PRJNA224116 SAMN00996443 AKAY00000000.1 na 1165947 562 Escherichia coli O111:H11 str. CVM9553 strain=CVM9553 na latest Contig Major Full 2012-07-09 EC_O111:H11_CVM9553_1.0 FDA GCA_000276925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/925/GCF_000276925.1_EC_O111_H11_CVM9553_1.0/ na na na haploid bacteria 5587405 5587405 50.500000 0 633 633 NCBI RefSeq GCF_000276925.1-RS_2025_06_09 2025-06-09 6149 5463 98 23052305 GCF_000276945.1 PRJNA224116 SAMN00996444 AKAZ00000000.1 na 1165950 562 Escherichia coli O26:H11 str. CVM10021 strain=CVM10021 na latest Contig Major Full 2012-07-09 EC_O26:H11_CVM10021_1.0 FDA GCA_000276945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/276/945/GCF_000276945.1_EC_O26_H11_CVM10021_1.0/ na na na haploid bacteria 5492799 5492799 50.500000 0 477 477 NCBI RefSeq GCF_000276945.1-RS_2025_04_26 2025-04-26 5883 5327 102 23052305 GCF_000277005.1 PRJNA224116 SAMN02469857 AKIS00000000.1 na 1144253 1144253 Pontibacter sp. BAB1700 strain=BAB1700 na latest Contig Major Full 2012-07-09 ASM27700v1 Gujarat Genomics Initiative GCA_000277005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/005/GCF_000277005.1_ASM27700v1/ na na na haploid bacteria 4537217 4537217 50.000000 0 267 267 NCBI RefSeq GCF_000277005.1-RS_2024_08_13 2024-08-13 4657 4237 49 23105068 GCF_000277125.1 PRJNA224116 SAMN02603186 na reference genome 487521 1767 Mycobacterium intracellulare ATCC 13950 strain=ATCC 13950 na latest Complete Genome Major Full 2012-02-29 ASM27712v1 Department of Microbiology and Immunology, Seoul National University GCA_000277125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/125/GCF_000277125.1_ASM27712v1/ na assembly from type material na haploid bacteria 5402402 5402402 68.000000 1 1 1 NCBI RefSeq GCF_000277125.1-RS_2025_12_23 2025-12-23 5084 4963 52 22535933 GCF_000277145.1 PRJNA224116 SAMN02603184 na na 1138382 1767 Mycobacterium intracellulare MOTT-02 strain=MOTT-02 na latest Complete Genome Major Full 2012-02-29 ASM27714v1 Department of Microbiology and Immunology, Seoul National University GCA_000277145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/145/GCF_000277145.1_ASM27714v1/ na na na haploid bacteria 5409696 5409696 68.000000 1 1 1 NCBI RefSeq GCF_000277145.1-RS_2026_01_15 2026-01-15 5096 4954 51 22535946 GCF_000277165.1 PRJNA224116 SAMN02603542 na reference genome 1105094 782 Rickettsia prowazekii str. Chernikova strain=Chernikova na latest Complete Genome Major Full 2012-03-21 ASM27716v1 Los Alamos National Laboratory GCA_000277165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/165/GCF_000277165.1_ASM27716v1/ na na na haploid bacteria 1109804 1109804 29.000000 1 1 1 NCBI RefSeq GCF_000277165.1-RS_2026_01_08 2026-01-08 887 831 40 na GCF_000277185.1 PRJNA224116 SAMN02603543 na na 1105095 782 Rickettsia prowazekii str. Katsinyian strain=Katsinyian na latest Complete Genome Major Full 2012-03-21 ASM27718v1 Los Alamos National Laboratory GCA_000277185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/185/GCF_000277185.1_ASM27718v1/ na na na haploid bacteria 1111454 1111454 29.000000 1 1 1 NCBI RefSeq GCF_000277185.1-RS_2026_01_08 2026-01-08 894 836 40 na GCF_000277205.1 PRJNA224116 SAMN02603544 na na 1105096 782 Rickettsia prowazekii str. BuV67-CWPP strain=BuV67-CWPP na latest Complete Genome Major Full 2012-03-21 ASM27720v1 Los Alamos National Laboratory GCA_000277205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/205/GCF_000277205.1_ASM27720v1/ na na na haploid bacteria 1111445 1111445 29.000000 1 1 1 NCBI RefSeq GCF_000277205.1-RS_2026_01_08 2026-01-08 894 836 40 na GCF_000277225.1 PRJNA224116 SAMN02603545 na na 1105097 782 Rickettsia prowazekii str. Dachau strain=Dachau na latest Chromosome Major Full 2012-03-21 ASM27722v1 Los Alamos National Laboratory GCA_000277225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/225/GCF_000277225.1_ASM27722v1/ na na na haploid bacteria 1109051 1108951 29.000000 1 1 2 NCBI RefSeq GCF_000277225.1-RS_2026_01_08 2026-01-08 888 814 40 na GCF_000277245.1 PRJNA224116 SAMN02603546 na na 1105098 782 Rickettsia prowazekii str. GvV257 strain=GvV257 na latest Complete Genome Major Full 2012-03-21 ASM27724v1 Los Alamos National Laboratory GCA_000277245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/245/GCF_000277245.1_ASM27724v1/ na na na haploid bacteria 1111969 1111969 29.000000 1 1 1 NCBI RefSeq GCF_000277245.1-RS_2026_01_08 2026-01-08 890 821 40 na GCF_000277265.1 PRJNA224116 SAMN02603547 na na 1105099 782 Rickettsia prowazekii str. RpGvF24 strain=RpGvF24 na latest Complete Genome Major Full 2012-03-21 ASM27726v1 Los Alamos National Laboratory GCA_000277265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/265/GCF_000277265.1_ASM27726v1/ na na na haploid bacteria 1112101 1112101 29.000000 1 1 1 NCBI RefSeq GCF_000277265.1-RS_2026_01_08 2026-01-08 891 830 40 na GCF_000277285.1 PRJNA224116 SAMN02603529 na na 1003201 785 Rickettsia typhi str. TH1527 strain=TH1527 na latest Complete Genome Major Full 2012-03-21 ASM27728v1 Los Alamos National Lab GCA_000277285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/285/GCF_000277285.1_ASM27728v1/ na na na haploid bacteria 1112372 1112372 29.000000 1 1 1 NCBI RefSeq GCF_000277285.1-RS_2026_01_08 2026-01-08 878 807 40 na GCF_000277305.1 PRJNA224116 SAMN02603530 na na 1003202 785 Rickettsia typhi str. B9991CWPP strain=B9991CWPP na latest Complete Genome Major Full 2012-03-21 ASM27730v1 Los Alamos National Lab GCA_000277305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/305/GCF_000277305.1_ASM27730v1/ na na na haploid bacteria 1112957 1112957 29.000000 1 1 1 NCBI RefSeq GCF_000277305.1-RS_2026_01_08 2026-01-08 878 808 40 na GCF_000277325.1 PRJNA224116 SAMN02603214 na na 1168290 28025 Bifidobacterium animalis subsp. lactis B420 strain=B420 na latest Complete Genome Major Full 2012-05-07 ASM27732v1 DuPont GCA_000277325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/325/GCF_000277325.1_ASM27732v1/ na na na haploid bacteria 1938595 1938595 60.500000 1 1 1 NCBI RefSeq GCF_000277325.1-RS_2026_01_13 2026-01-13 1622 1537 67 22815448 GCF_000277345.1 PRJNA224116 SAMN02603215 na na 742729 28025 Bifidobacterium animalis subsp. lactis Bi-07 strain=Bi-07 na latest Complete Genome Major Full 2012-05-07 ASM27734v1 DuPont GCA_000277345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/345/GCF_000277345.1_ASM27734v1/ na na na haploid bacteria 1938822 1938822 60.500000 1 1 1 NCBI RefSeq GCF_000277345.1-RS_2026_01_13 2026-01-13 1621 1536 67 22815448 GCF_000277365.1 PRJNA224116 SAMN02603193 na na 1163739 210 Helicobacter pylori Shi417 strain=Shi417 na latest Complete Genome Major Full 2012-04-19 ASM27736v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000277365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/365/GCF_000277365.1_ASM27736v1/ na na na haploid bacteria 1665719 1665719 39.000000 1 1 1 NCBI RefSeq GCF_000277365.1-RS_2026_01_10 2026-01-10 1597 1478 45 na GCF_000277385.1 PRJNA224116 SAMN02603195 na na 1163741 210 Helicobacter pylori Shi169 strain=Shi169 na latest Complete Genome Major Full 2012-04-19 ASM27738v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000277385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/385/GCF_000277385.1_ASM27738v1/ na na na haploid bacteria 1616909 1616909 39.000000 1 1 1 NCBI RefSeq GCF_000277385.1-RS_2026_01_10 2026-01-10 1566 1441 45 na GCF_000277405.1 PRJNA224116 SAMN02603194 na na 1163740 210 Helicobacter pylori Shi112 strain=Shi112 na latest Complete Genome Major Full 2012-04-19 ASM27740v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000277405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/405/GCF_000277405.1_ASM27740v1/ na na na haploid bacteria 1663456 1663456 39.000000 1 1 1 NCBI RefSeq GCF_000277405.1-RS_2026_01_10 2026-01-10 1608 1486 46 na GCF_000277425.1 PRJNA224116 SAMN02603196 na na 1163742 210 Helicobacter pylori PeCan18 strain=PeCan18 na latest Complete Genome Major Full 2012-04-19 ASM27742v1 Dept. Molec. Microbiology, Washington University Medical School in Saint Louis GCA_000277425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/425/GCF_000277425.1_ASM27742v1/ na na na haploid bacteria 1660685 1660685 39.000000 1 1 1 NCBI RefSeq GCF_000277425.1-RS_2026_01_10 2026-01-10 1583 1465 45 na GCF_000277505.1 PRJNA224116 SAMN00828777 AJZT00000000.1 na 796945 1501329 Oribacterium parvum ACB8 strain=ACB8 na latest Contig Major Full 2012-07-10 OspACB8v1.0 J. Craig Venter Institute GCA_000277505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/505/GCF_000277505.1_OspACB8v1.0/ na na na haploid bacteria 2481911 2481911 42.000000 0 15 15 NCBI RefSeq GCF_000277505.1-RS_2026_02_27 2026-02-27 2197 2124 47 na GCF_000277525.1 PRJNA224116 SAMN02470887 AKIB00000000.1 na 1192759 121428 Sphingobium xenophagum QYY strain=QYY na latest Contig Major Full 2012-07-10 ASM27752v1 School of Environmental Science and Technology, Dalian University of Technology GCA_000277525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/525/GCF_000277525.1_ASM27752v1/ na na na haploid bacteria 4221110 4221110 63.000000 0 129 129 NCBI RefSeq GCF_000277525.1-RS_2026_03_31 2026-03-31 4126 4011 56 23405319 GCF_000277545.1 PRJNA224116 SAMN02470680 AKXM00000000.1 na 1202448 1202448 Enterobacter sp. Ag1 strain=Ag1 na latest Contig Major Full 2012-07-10 ASM27754v1 New Mexico State University GCA_000277545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/545/GCF_000277545.1_ASM27754v1/ na na na haploid bacteria 4746650 4746650 55.000000 0 64 64 NCBI RefSeq GCF_000277545.1-RS_2024_07_01 2024-07-01 4557 4408 93 22965099 GCF_000277565.1 PRJNA224116 SAMN02471426 AKTT00000000.1 na 1173691 1173691 Citrobacter sp. A1 strain=A1 na latest Contig Major Full 2012-07-10 ASM27756v1 Universiti Teknologi Malaysia GCA_000277565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/565/GCF_000277565.1_ASM27756v1/ na na na haploid bacteria 5090626 5090626 52.000000 0 73 73 NCBI RefSeq GCF_000277565.1-RS_2024_08_13 2024-08-13 4931 4750 75 22965102 GCF_000277585.1 PRJNA224116 SAMN00792203 AKFV00000000.1 na 1125719 1018 Capnocytophaga ochracea str. Holt 25 strain=Holt 25 na latest Contig Major Full 2012-07-10 CochraceaHolt25v1.0 J. Craig Venter Institute GCA_000277585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/585/GCF_000277585.1_CochraceaHolt25v1.0/ na na na haploid bacteria 2653757 2653757 39.500000 0 42 42 NCBI RefSeq GCF_000277585.1-RS_2025_12_04 2025-12-04 2246 2161 58 na GCF_000277605.1 PRJNA224116 SAMN02471425 AKKS00000000.1 na 1182762 1182762 Enterococcus sp. C1 strain=C1 na latest Contig Major Full 2012-07-10 ASM27760v1 Universiti Teknologi Malaysia GCA_000277605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/605/GCF_000277605.1_ASM27760v1/ na na na haploid bacteria 3644928 3644928 42.500000 0 36 36 NCBI RefSeq GCF_000277605.1-RS_2025_08_27 2025-08-27 3426 3347 54 23012290 GCF_000277625.1 PRJNA224116 SAMN00828787 AKFU00000000.1 na 1105031 1105031 Clostridium sp. MSTE9 strain=MSTE9 na latest Contig Major Full 2012-07-10 CspMSTE9v1.0 J. Craig Venter Institute GCA_000277625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/625/GCF_000277625.1_CspMSTE9v1.0/ na na na haploid bacteria 3508922 3508922 52.000000 0 55 55 NCBI RefSeq GCF_000277625.1-RS_2024_05_28 2024-05-28 3351 3267 60 na GCF_000277645.1 PRJNA224116 SAMN02469598 AKGG00000000.1 na 1123721 165096 Weissella koreensis KCTC 3621 strain=KCTC 3621 na latest Contig Major Full 2012-07-10 ASM27764v1 Chunlab Inc GCA_000277645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/645/GCF_000277645.1_ASM27764v1/ na assembly from type material na haploid bacteria 1728940 1728940 35.500000 0 17 17 NCBI RefSeq GCF_000277645.1-RS_2026_03_28 2026-03-28 1748 1652 79 23012287 GCF_000277665.1 PRJNA224116 SAMN00792204 AKFR00000000.1 na 1125720 712215 Capnocytophaga sp. oral taxon 335 str. F0486 strain=F0486 na latest Contig Major Full 2012-07-10 Coraltaxon335F0486v1.0 J. Craig Venter Institute GCA_000277665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/665/GCF_000277665.1_Coraltaxon335F0486v1.0/ na na na haploid bacteria 2545989 2545989 39.500000 0 38 38 NCBI RefSeq GCF_000277665.1-RS_2025_01_07 2025-01-07 2162 2083 57 na GCF_000277685.1 PRJNA224116 SAMN00792232 AKFS00000000.1 na 1125717 52768 Schaalia georgiae F0490 strain=F0490 na latest Contig Major Full 2012-07-10 AgeorgiaeF0490v1.0 J. Craig Venter Institute GCA_000277685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/685/GCF_000277685.1_AgeorgiaeF0490v1.0/ na na na haploid bacteria 2477360 2477360 70.000000 0 306 306 NCBI RefSeq GCF_000277685.1-RS_2026_04_16 2026-04-16 2319 2183 54 na GCF_000277715.1 PRJNA224116 SAMN02415616 na na 767029 1750 Arachnia propionica F0230a strain=F0230a na latest Complete Genome Major Full 2012-07-12 ASM27771v1 J. Craig Venter Institute GCA_000277715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/715/GCF_000277715.1_ASM27771v1/ na na na haploid bacteria 3449360 3449360 66.000000 1 1 1 NCBI RefSeq GCF_000277715.1-RS_2026_05_01 2026-05-01 3123 3032 57 na GCF_000277735.2 PRJNA224116 SAMN03081436 na na 83332 1773 Mycobacterium tuberculosis H37Rv strain=H37Rv na latest Complete Genome Major Full 2013-11-26 ASM27773v2 The Broad Institute GCA_000277735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/735/GCF_000277735.2_ASM27773v2/ na assembly from type material na haploid bacteria 4411709 4411709 65.500000 1 1 1 NCBI RefSeq GCF_000277735.2-RS_2025_06_29 2025-06-29 4161 3947 51 na GCF_000277755.1 PRJNA224116 SAMN02261358 na na 627344 542 Zymomonas mobilis subsp. mobilis ATCC 29191 strain=ATCC 29191 na latest Complete Genome Major Full 2012-07-13 ASM27775v1 JGI GCA_000277755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/755/GCF_000277755.1_ASM27775v1/ na na na haploid bacteria 2008345 2008345 46.000000 4 4 4 NCBI RefSeq GCF_000277755.1-RS_2026_05_14 2026-05-14 1835 1741 63 23045486 GCF_000277775.2 PRJNA224116 SAMN02604144 na na 1198627 36809 Mycobacteroides abscessus subsp. massiliense str. GO 06 strain=GO 06 na latest Complete Genome Major Full 2014-06-10 ASM27777v2 University of Brasilia GCA_000277775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/775/GCF_000277775.2_ASM27777v2/ na na na haploid bacteria 4687873 4687873 64.500000 1 1 1 NCBI RefSeq GCF_000277775.2-RS_2026_03_04 2026-03-04 4635 4531 52 22965084 GCF_000277795.1 PRJNA224116 SAMN02603734 na reference genome 1197325 65123 Mycoplasma wenyonii str. Massachusetts strain=Massachusetts na latest Complete Genome Major Full 2012-07-16 ASM27779v1 Purdue University GCA_000277795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/795/GCF_000277795.1_ASM27779v1/ na assembly designated as reftype na haploid bacteria 650228 650228 34.000000 1 1 1 NCBI RefSeq GCF_000277795.1-RS_2026_03_28 2026-03-28 749 711 37 22965086 GCF_000277815.2 PRJNA173349 SAMN03081428 na reference genome 907965 27973 Encephalitozoon hellem ATCC 50504 strain=ATCC 50504 na latest Chromosome Major Full 2012-07-16 ASM27781v3 University of British Columbia GCA_000277815.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/815/GCF_000277815.2_ASM27781v3/ na na na haploid fungi 2251784 2251784 43.500000 11 12 12 University of British Columbia Annotation submitted by University of British Columbia 2023-09-27 2006 1928 78 22802648 GCF_000277875.1 PRJNA224116 SAMN02471727 AKBE00000000.1 na 1094183 56459 Xanthomonas vasicola pv. musacearum NCPPB 2005 strain=NCPPB 2005 na latest Scaffold Major Full 2013-02-04 Xcm2005v1 University of Exeter GCA_000277875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/875/GCF_000277875.1_Xcm2005v1/ na na na haploid bacteria 4692764 4685105 63.500000 0 156 221 NCBI RefSeq GCF_000277875.1-RS_2026_05_13 2026-05-13 4202 3704 139 24704974 GCF_000277895.2 PRJNA224116 SAMN00991242 na reference genome 1094184 56459 Xanthomonas vasicola pv. musacearum NCPPB 4379 strain=NCPPB 4379 na latest Complete Genome Major Full 2018-12-27 ASM27789v2 University of Exeter GCA_000277895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/895/GCF_000277895.2_ASM27789v2/ na na na haploid bacteria 4837576 4837576 63.500000 2 2 2 NCBI RefSeq GCF_000277895.2-RS_2026_05_15 2026-05-15 4295 3811 149 24704974 GCF_000277915.1 PRJNA224116 SAMN00991243 AKBG00000000.1 na 1094185 56459 Xanthomonas vasicola pv. musacearum NCPPB 4380 strain=NCPPB 4380 na latest Scaffold Major Full 2013-02-04 Xcm4380v1 University of Exeter GCA_000277915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/915/GCF_000277915.1_Xcm4380v1/ na na na haploid bacteria 4751644 4748007 63.500000 0 87 314 NCBI RefSeq GCF_000277915.1-RS_2026_05_15 2026-05-15 4353 3802 141 24704974 GCF_000277955.1 PRJNA224116 SAMN02471739 AKBI00000000.1 na 1184263 56459 Xanthomonas vasicola pv. musacearum NCPPB 4392 strain=NCPPB 4392 na latest Scaffold Major Full 2013-02-04 Xcm4392v1 University of Exeter GCA_000277955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/955/GCF_000277955.1_Xcm4392v1/ na na na haploid bacteria 4728564 4718482 63.500000 0 162 300 NCBI RefSeq GCF_000277955.1-RS_2026_05_15 2026-05-15 4287 3745 139 24704974 GCF_000277975.1 PRJNA224116 SAMN00991245 AKBJ00000000.1 na 1094187 56459 Xanthomonas vasicola pv. musacearum NCPPB 4394 strain=NCPPB 4394 na latest Scaffold Major Full 2013-02-04 Xcm4394v1 University of Exeter GCA_000277975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/975/GCF_000277975.1_Xcm4394v1/ na na na haploid bacteria 4792617 4743653 63.500000 0 85 481 NCBI RefSeq GCF_000277975.1-RS_2026_05_15 2026-05-15 4473 3874 142 24704974 GCF_000277995.1 PRJNA224116 SAMN02471728 AKBK00000000.1 na 1094174 56459 Xanthomonas vasicola pv. vasculorum NCPPB 1326 strain=NCPPB 1326 na latest Scaffold Major Full 2013-02-04 Xvv1326v1 University of Exeter GCA_000277995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/277/995/GCF_000277995.1_Xvv1326v1/ na na na haploid bacteria 4951570 4939284 63.500000 0 253 580 NCBI RefSeq GCF_000277995.1-RS_2026_05_15 2026-05-15 4735 4128 139 24704974 GCF_000278015.1 PRJNA224116 SAMN00991255 AKBL00000000.1 na 1094180 56459 Xanthomonas vasicola pv. vasculorum NCPPB 1381 strain=NCPPB 1381 na latest Scaffold Major Full 2013-02-04 Xvv1381v1 University of Exeter GCA_000278015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/015/GCF_000278015.1_Xvv1381v1/ na na na haploid bacteria 4958101 4942065 63.500000 0 337 603 NCBI RefSeq GCF_000278015.1-RS_2026_01_19 2026-01-19 4729 4116 151 24704974 GCF_000278035.1 PRJNA224116 SAMN00991256 AKBM00000000.1 na 1094181 56459 Xanthomonas vasicola pv. vasculorum NCPPB 206 strain=NCPPB 206 na latest Scaffold Major Full 2013-02-04 Xvv206v1 University of Exeter GCA_000278035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/035/GCF_000278035.1_Xvv206v1/ na na na haploid bacteria 4825935 4822198 63.500000 0 177 248 NCBI RefSeq GCF_000278035.1-RS_2026_05_07 2026-05-07 4382 3912 138 24704974 GCF_000278055.2 PRJNA224116 SAMN02439006 AKBN00000000.2 na 1184265 56459 Xanthomonas vasicola pv. vasculorum NCPPB 890 strain=NCPPB 890 na latest Contig Major Full 2021-07-11 Xvv890v2 University of Exeter GCA_000278055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/055/GCF_000278055.2_Xvv890v2/ na na na haploid bacteria 5076162 5076162 63.500000 0 82 82 NCBI RefSeq GCF_000278055.2-RS_2026_05_15 2026-05-15 4607 4150 150 25437615 GCF_000278075.1 PRJNA224116 SAMN02439007 AKBO00000000.1 na 1184266 56459 Xanthomonas vasicola pv. vasculorum NCPPB 895 strain=NCPPB 895 na latest Scaffold Major Full 2013-02-04 Xvv895v1 University of Exeter GCA_000278075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/075/GCF_000278075.1_Xvv895v1/ na na na haploid bacteria 4803807 4803707 63.000000 0 1229 1239 NCBI RefSeq GCF_000278075.1-RS_2026_05_15 2026-05-15 4984 4234 108 na GCF_000278095.1 PRJNA224116 SAMN02596907 AIMC00000000.1 reference genome 1094552 111504 Bartonella birtlesii LL-WM9 strain=LL-WM9 na latest Scaffold Major Full 2012-07-25 Bart_birt_LL-WM9_V1 Broad Institute GCA_000278095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/095/GCF_000278095.1_Bart_birt_LL-WM9_V1/ na na na haploid bacteria 1922932 1858066 38.000000 0 5 52 NCBI RefSeq GCF_000278095.1-RS_2026_04_26 2026-04-26 1643 1533 46 na GCF_000278115.1 PRJNA224116 SAMN02596898 AILT00000000.1 na 1094755 1094755 Bartonella sp. DB5-6 strain=DB5-6 na latest Scaffold Major Full 2012-07-25 Bart_sp_DB5-6_V1 Broad Institute GCA_000278115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/115/GCF_000278115.1_Bart_sp_DB5-6_V1/ na na na haploid bacteria 2147644 2081514 38.500000 0 25 86 NCBI RefSeq GCF_000278115.1-RS_2024_08_22 2024-08-22 1982 1792 64 na GCF_000278135.1 PRJNA224116 SAMN02596899 AILU00000000.1 reference genome 1094563 186739 Candidatus Bartonella washoeensis Sb944nv strain=Sb944nv na latest Scaffold Major Full 2012-07-25 Bart_wash_Sb944nv_V1 Broad Institute GCA_000278135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/135/GCF_000278135.1_Bart_wash_Sb944nv_V1/ na na na haploid bacteria 1970822 1910532 38.500000 0 11 58 NCBI RefSeq GCF_000278135.1-RS_2026_03_17 2026-03-17 1684 1555 46 na GCF_000278155.1 PRJNA224116 SAMN02596900 AILV00000000.1 na 1094553 33044 Bartonella doshiae NCTC 12862 = ATCC 700133 strain=NCTC 12862 na latest Scaffold Major Full 2012-07-25 Bart_dosh_NCTC_12862_R18_V1 Broad Institute GCA_000278155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/155/GCF_000278155.1_Bart_dosh_NCTC_12862_R18_V1/ na assembly from type material na haploid bacteria 1810183 1797808 38.000000 0 7 25 NCBI RefSeq GCF_000278155.1-RS_2026_04_29 2026-04-29 1600 1485 52 na GCF_000278175.1 PRJNA224116 SAMN02596901 AILW00000000.1 na 1094554 807 Bartonella elizabethae Re6043vi strain=Re6043vi na latest Scaffold Major Full 2012-07-25 Bart_eliz_Re6043vi_V1 Broad Institute GCA_000278175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/175/GCF_000278175.1_Bart_eliz_Re6043vi_V1/ na na na haploid bacteria 1959918 1927526 38.500000 0 8 38 NCBI RefSeq GCF_000278175.1-RS_2026_04_29 2026-04-29 1649 1525 52 na GCF_000278195.1 PRJNA224116 SAMN02596902 AILX00000000.1 na 1094564 186739 Cardidatus Bartonella washoeensis 085-0475 strain=085-0475 na latest Scaffold Major Full 2012-07-25 Bart_wash_085-0475_V1 Broad Institute GCA_000278195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/195/GCF_000278195.1_Bart_wash_085-0475_V1/ na na na haploid bacteria 1956558 1914698 39.000000 0 13 47 NCBI RefSeq GCF_000278195.1-RS_2026_03_17 2026-03-17 1692 1548 64 na GCF_000278215.1 PRJNA224116 SAMN02596903 AILY00000000.1 reference genome 1094556 270250 Bartonella rattimassiliensis 15908 strain=15908 na latest Scaffold Major Full 2012-07-25 Bart_ratt_15908_V1 Broad Institute GCA_000278215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/215/GCF_000278215.1_Bart_ratt_15908_V1/ na assembly from type material na haploid bacteria 2170653 2076034 36.500000 0 12 65 NCBI RefSeq GCF_000278215.1-RS_2026_04_26 2026-04-26 1775 1583 46 na GCF_000278235.1 PRJNA224116 SAMN02596904 AILZ00000000.1 na 1094562 33047 Bartonella vinsonii subsp. arupensis OK-94-513 strain=OK-94-513 na latest Scaffold Major Full 2012-07-25 Bart_vins_OK-94-513_V1 Broad Institute GCA_000278235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/235/GCF_000278235.1_Bart_vins_OK-94-513_V1/ na assembly from type material na haploid bacteria 1786506 1752954 38.500000 0 6 52 NCBI RefSeq GCF_000278235.1-RS_2026_04_29 2026-04-29 1528 1433 46 na GCF_000278255.1 PRJNA224116 SAMN02596905 AIMA00000000.1 reference genome 1094557 291176 Bartonella melophagi K-2C strain=K-2C na latest Scaffold Major Full 2012-07-25 Bart_melo_K-2C_V1 Broad Institute GCA_000278255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/255/GCF_000278255.1_Bart_melo_K-2C_V1/ na na na haploid bacteria 1571225 1518819 37.000000 0 13 47 NCBI RefSeq GCF_000278255.1-RS_2026_04_29 2026-04-29 1347 1243 52 na GCF_000278275.1 PRJNA224116 SAMN02596906 AIMB00000000.1 reference genome 1094558 373638 Bartonella tamiae Th239 strain=Th239 na latest Scaffold Major Full 2012-07-25 Bart_tami_Th239_V1 Broad Institute GCA_000278275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/275/GCF_000278275.1_Bart_tami_Th239_V1/ na assembly from type material na haploid bacteria 2260792 2252122 38.000000 0 3 10 NCBI RefSeq GCF_000278275.1-RS_2026_04_29 2026-04-29 2050 1943 56 na GCF_000278295.1 PRJNA224116 SAMN02596908 AIMD00000000.1 na 1094560 33046 Bartonella taylorii 8TBB strain=8TBB na latest Scaffold Major Full 2012-07-25 Bart_tayl_8TBB_V1 Broad Institute GCA_000278295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/295/GCF_000278295.1_Bart_tayl_8TBB_V1/ na na na haploid bacteria 2015681 1918942 38.500000 0 14 80 NCBI RefSeq GCF_000278295.1-RS_2026_04_29 2026-04-29 1721 1581 46 na GCF_000278315.1 PRJNA224116 SAMN02596910 AIMF00000000.1 na 1094555 807 Bartonella elizabethae F9251 = ATCC 49927 strain=F9251 na latest Scaffold Major Full 2012-07-25 Bart_eliz_F9251_V1 Broad Institute GCA_000278315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/315/GCF_000278315.1_Bart_eliz_F9251_V1/ na assembly from type material na haploid bacteria 1978557 1942697 38.500000 0 4 49 NCBI RefSeq GCF_000278315.1-RS_2025_12_23 2025-12-23 1655 1531 52 na GCF_000278335.1 PRJNA224116 SAMN02596912 AIMH00000000.1 na 1094561 33047 Bartonella vinsonii subsp. arupensis Pm136co strain=Pm136co na latest Scaffold Major Full 2012-07-25 Bart_vins_Pm136co_V1 Broad Institute GCA_000278335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/335/GCF_000278335.1_Bart_vins_Pm136co_V1/ na na na haploid bacteria 1857191 1802512 38.500000 0 7 47 NCBI RefSeq GCF_000278335.1-RS_2026_04_29 2026-04-29 1561 1459 46 na GCF_000278385.1 PRJNA224116 SAMN02470707 AGQP00000000.1 na 1081943 1392 Bacillus anthracis str. Heroin Ba4599 strain=Heroin Ba4599 na latest Contig Major Full 2012-07-11 ASM27838v1 Northern Arizona University, USA GCA_000278385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/385/GCF_000278385.1_ASM27838v1/ na na na haploid bacteria 5468377 5468377 35.000000 0 46 46 NCBI RefSeq GCF_000278385.1-RS_2026_04_21 2026-04-21 5799 5301 124 22840345 GCF_000278445.1 PRJNA224116 SAMN02472115 AJVB00000000.1 na 1170698 1170698 Rhodococcus sp. R1101 strain=R1101 na latest Contig Major Full 2012-07-16 RhodoR1101_1.0 Walter Reed Army Institute of Research GCA_000278445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/445/GCF_000278445.1_RhodoR1101_1.0/ na na na haploid bacteria 4651593 4651593 68.000000 0 990 990 NCBI RefSeq GCF_000278445.1-RS_2025_08_25 2025-08-25 4953 4422 61 na GCF_000278465.1 PRJNA224116 SAMN02415217 AKFW00000000.1 na 1182758 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-2599 strain=2010K-2599 na latest Contig Major Full 2012-07-10 CDC_2010K-2599v1.0 Centers for Disease Control & Prevention GCA_000278465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/465/GCF_000278465.1_CDC_2010K-2599v1.0/ na na na haploid bacteria 4727926 4727926 52.000000 0 40 40 NCBI RefSeq GCF_000278465.1-RS_2025_03_19 2025-03-19 4657 4318 89 na GCF_000278485.1 PRJNA224116 SAMN02415218 AKFX00000000.1 na 1182757 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0669 strain=2010K-0669 na latest Contig Major Full 2012-07-10 CDC-2010K_0669v1.0 Centers for Disease Control & Prevention GCA_000278485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/485/GCF_000278485.1_CDC-2010K_0669v1.0/ na na na haploid bacteria 4728160 4728160 52.000000 0 35 35 NCBI RefSeq GCF_000278485.1-RS_2025_03_19 2025-03-19 4659 4319 89 na GCF_000278505.1 PRJNA224116 SAMN02415219 AKFY00000000.1 na 1182759 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0047 strain=08-0047 na latest Contig Major Full 2012-07-10 08-0047v1.0 Centers for Disease Control & Prevention GCA_000278505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/505/GCF_000278505.1_08-0047v1.0/ na na na haploid bacteria 4683206 4683206 52.000000 0 98 98 NCBI RefSeq GCF_000278505.1-RS_2025_03_19 2025-03-19 4643 4290 82 na GCF_000278525.1 PRJNA224116 SAMN02415220 AKFZ00000000.1 na 1182760 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0128 strain=08-0128 na latest Contig Major Full 2012-07-10 08-0128v1.0 Centers for Disease Control & Prevention GCA_000278525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/525/GCF_000278525.1_08-0128v1.0/ na na na haploid bacteria 4726587 4726587 52.000000 0 38 38 NCBI RefSeq GCF_000278525.1-RS_2025_03_19 2025-03-19 4658 4310 94 na GCF_000278545.1 PRJNA224116 SAMN02415221 AKGA00000000.1 na 1182761 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0627 strain=08-0627 na latest Contig Major Full 2012-07-10 08-0627v1.0 Centers for Disease Control & Prevention GCA_000278545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/545/GCF_000278545.1_08-0627v1.0/ na na na haploid bacteria 4726824 4726824 52.000000 0 41 41 NCBI RefSeq GCF_000278545.1-RS_2025_03_19 2025-03-19 4660 4345 93 na GCF_000278565.1 PRJNA224116 SAMN02470678 AKVH00000000.1 na 1197727 1197727 Pseudomonas sp. Ag1 strain=Ag1 na latest Contig Major Full 2012-07-12 ASM27856v1 New Mexico State University GCA_000278565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/565/GCF_000278565.1_ASM27856v1/ na na na haploid bacteria 7252358 7252358 60.500000 0 113 113 NCBI RefSeq GCF_000278565.1-RS_2025_08_27 2025-08-27 6725 6575 56 22965079 GCF_000278585.1 PRJNA224116 SAMN02471831 AKYI00000000.2 na 1198133 34 Myxococcus xanthus DZ2 strain=DZ2 na latest Contig Major Full 2013-02-10 ASM27858v2 University of Iowa GCA_000278585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/585/GCF_000278585.1_ASM27858v2/ na na na haploid bacteria 9271183 9271183 69.000000 0 87 87 NCBI RefSeq GCF_000278585.1-RS_2025_08_06 2025-08-06 7603 7432 68 23661486 GCF_000278605.1 PRJNA224116 SAMN02436551 AFDO00000000.1 na 903896 470 Acinetobacter baumannii Naval-17 strain=Naval-17 na latest Contig Major Full 2012-07-16 gacin08v1.0 Walter Reed Army Institute of Research GCA_000278605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/605/GCF_000278605.1_gacin08v1.0/ na na na haploid bacteria 4009964 4009964 39.000000 1 21 21 NCBI RefSeq GCF_000278605.1-RS_2025_04_22 2025-04-22 3925 3719 96 26195261 GCF_000278625.1 PRJNA224116 SAMN02436470 AFDK00000000.1 na 903889 470 Acinetobacter baumannii OIFC137 strain=OIFC137 na latest Contig Major Full 2012-07-16 AcbauOIFC137v1.0 Walter Reed Army Institute of Research GCA_000278625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/625/GCF_000278625.1_AcbauOIFC137v1.0/ na na na haploid bacteria 4081420 4081420 39.000000 1 4 4 NCBI RefSeq GCF_000278625.1-RS_2025_04_22 2025-04-22 3950 3753 94 26195261 GCF_000278645.1 PRJNA224116 SAMN02436409 ALAL00000000.1 na 903892 470 Acinetobacter baumannii OIFC109 strain=OIFC109 na latest Contig Major Full 2012-07-16 AcbauOIFC109v1.0 Walter Reed Army Institute of Research GCA_000278645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/645/GCF_000278645.1_AcbauOIFC109v1.0/ na na na haploid bacteria 4107121 4107121 39.000000 1 13 13 NCBI RefSeq GCF_000278645.1-RS_2025_04_22 2025-04-22 3991 3773 90 26195261 GCF_000278665.1 PRJNA224116 SAMN02436631 AFDL00000000.1 na 903893 470 Acinetobacter baumannii OIFC143 strain=OIFC143 na latest Contig Major Full 2012-07-16 AcbauOIFC143v1.0 Walter Reed Army Institute of Research GCA_000278665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/665/GCF_000278665.1_AcbauOIFC143v1.0/ na na na haploid bacteria 4441327 4441327 39.000000 4 8 8 NCBI RefSeq GCF_000278665.1-RS_2024_04_24 2024-04-24 4338 4124 94 26195261 GCF_000278685.1 PRJNA224116 SAMN00114925 AFDM00000000.1 na 903894 470 Acinetobacter baumannii OIFC189 strain=OIFC189 na latest Contig Major Full 2012-07-16 AcbauOIFC189v1.0 Walter Reed Army Institute of Research GCA_000278685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/685/GCF_000278685.1_AcbauOIFC189v1.0/ na na na haploid bacteria 4043115 4043115 39.000000 1 10 10 NCBI RefSeq GCF_000278685.1-RS_2026_04_23 2026-04-23 3920 3728 96 26195261 GCF_000278705.1 PRJNA224116 SAMN02393829 AKZQ00000000.1 na 1202532 1202532 Flavobacterium sp. F52 strain=F52 na latest Contig Major Full 2012-07-13 ASM27870v1 ARO, Volcani Agriculture Research Center GCA_000278705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/705/GCF_000278705.1_ASM27870v1/ na na na haploid bacteria 5336938 5336938 34.500000 0 54 54 NCBI RefSeq GCF_000278705.1-RS_2025_02_25 2025-02-25 4621 4550 54 22965088 GCF_000278725.1 PRJNA224116 SAMN00828776 ALCA00000000.1 na 936548 936548 Actinomyces sp. ICM47 strain=ICM47 na latest Contig Major Full 2012-07-16 AspICM47v1.0 J. Craig Venter Institute GCA_000278725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/725/GCF_000278725.1_AspICM47v1.0/ na na na haploid bacteria 2444105 2444105 64.500000 0 143 143 NCBI RefSeq GCF_000278725.1-RS_2025_08_25 2025-08-25 2092 1988 54 na GCF_000278785.1 PRJNA224116 SAMN02471539 ALAY00000000.1 na 914131 1313 Streptococcus pneumoniae 2070035 strain=2070035 na latest Contig Major Full 2012-07-16 ASM27878v1 Academic Medical Center Amsterdam, The Netherlands GCA_000278785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/785/GCF_000278785.1_ASM27878v1/ na na na haploid bacteria 2050567 2050567 39.500000 0 24 24 NCBI RefSeq GCF_000278785.1-RS_2025_12_30 2025-12-30 2145 1927 53 na GCF_000278865.1 PRJNA224116 SAMN02471537 ALBC00000000.1 na 914133 1313 Streptococcus pneumoniae 2070425 strain=2070425 na latest Contig Major Full 2012-07-16 ASM27886v1 Academic Medical Center Amsterdam, The Netherlands GCA_000278865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/865/GCF_000278865.1_ASM27886v1/ na na na haploid bacteria 2147760 2147760 39.500000 0 60 60 NCBI RefSeq GCF_000278865.1-RS_2026_02_17 2026-02-17 2298 2055 46 na GCF_000278885.1 PRJNA224116 SAMN02471525 ALBD00000000.1 na 914142 1313 Streptococcus pneumoniae 2070531 strain=2070531 na latest Contig Major Full 2012-07-16 ASM27888v1 Academic Medical Center Amsterdam, The Netherlands GCA_000278885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/885/GCF_000278885.1_ASM27888v1/ na na na haploid bacteria 2130113 2130113 39.500000 0 52 52 NCBI RefSeq GCF_000278885.1-RS_2026_02_17 2026-02-17 2265 2012 53 na GCF_000278985.1 PRJNA224116 SAMN02471541 ALBI00000000.1 na 914130 1313 Streptococcus pneumoniae 2061617 strain=2061617 na latest Contig Major Full 2012-07-16 ASM27898v1 Academic Medical Center Amsterdam, The Netherlands GCA_000278985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/278/985/GCF_000278985.1_ASM27898v1/ na na na haploid bacteria 2079710 2079710 39.500000 0 23 23 NCBI RefSeq GCF_000278985.1-RS_2026_01_03 2026-01-03 2171 1926 57 na GCF_000279005.1 PRJNA224116 SAMN02471542 ALBJ00000000.1 na 914135 1313 Streptococcus pneumoniae 2071004 strain=2071004 na latest Contig Major Full 2012-07-16 ASM27900v1 Academic Medical Center Amsterdam, The Netherlands GCA_000279005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/005/GCF_000279005.1_ASM27900v1/ na na na haploid bacteria 2107559 2107559 39.500000 0 24 24 NCBI RefSeq GCF_000279005.1-RS_2026_02_17 2026-02-17 2204 1969 58 na GCF_000279045.1 PRJNA224116 SAMN02471533 ALBL00000000.1 na 914145 1313 Streptococcus pneumoniae 2080913 strain=2080913 na latest Contig Major Full 2012-07-16 ASM27904v1 Academic Medical Center Amsterdam, The Netherlands GCA_000279045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/045/GCF_000279045.1_ASM27904v1/ na na na haploid bacteria 2064010 2064010 39.500000 0 21 21 NCBI RefSeq GCF_000279045.1-RS_2026_01_01 2026-01-01 2171 1939 54 na GCF_000279145.1 PRJNA224116 SAMN02603097 na reference genome 1191523 1134405 Melioribacter roseus P3M-2 strain=P3M-2 na latest Complete Genome Major Full 2012-07-18 ASM27914v1 Centre Bioengineering RAS GCA_000279145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/145/GCF_000279145.1_ASM27914v1/ na assembly from type material na haploid bacteria 3300414 3300414 41.500000 1 1 1 NCBI RefSeq GCF_000279145.1-RS_2025_12_13 2025-12-13 2952 2873 51 23297868;23301019 GCF_000279185.1 PRJNA224116 SAMN00622038 ALDO00000000.1 na 991963 666 Vibrio cholerae HC-42A1 strain=HC-42A1 na latest Scaffold Major Full 2012-07-25 ASM27918v1 Institute for Genome Sciences GCA_000279185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/185/GCF_000279185.1_ASM27918v1/ na na na haploid bacteria 4024780 4018807 47.500000 0 106 210 NCBI RefSeq GCF_000279185.1-RS_2026_07_01 2026-07-01 3738 3577 82 na GCF_000279205.1 PRJNA224116 SAMN00622041 ALDX00000000.1 na 991974 666 Vibrio cholerae HC-56A2 strain=HC-56A2 na latest Scaffold Major Full 2012-07-25 ASM27920v1 Institute for Genome Sciences GCA_000279205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/205/GCF_000279205.1_ASM27920v1/ na na na haploid bacteria 4029365 4019913 47.500000 0 106 226 NCBI RefSeq GCF_000279205.1-RS_2025_04_18 2025-04-18 3754 3576 83 na GCF_000279225.1 PRJNA224116 SAMN00718783 ALCG00000000.1 na 760858 1313 Streptococcus pneumoniae GA52612 strain=GA52612 na latest Contig Major Full 2012-07-18 ASM27922v1 Institute for Genome Sciences GCA_000279225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/225/GCF_000279225.1_ASM27922v1/ na na na haploid bacteria 2090476 2090476 39.500000 0 10 10 NCBI RefSeq GCF_000279225.1-RS_2025_12_31 2025-12-31 2151 1901 78 na GCF_000279245.1 PRJNA224116 SAMN00622027 ALDE00000000.1 na 991926 666 Vibrio cholerae CP1041(14) strain=CP1041(14) na latest Contig Major Full 2012-07-18 ASM27924v1 Institute for Genome Sciences GCA_000279245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/245/GCF_000279245.1_ASM27924v1/ na na na haploid bacteria 4085554 4085554 47.500000 0 23 23 NCBI RefSeq GCF_000279245.1-RS_2026_04_24 2026-04-24 3756 3577 107 na GCF_000279265.1 PRJNA224116 SAMN00265075 ALEC00000000.1 na 991944 666 Vibrio cholerae HE-25 strain=HE25 na latest Contig Major Full 2012-07-18 ASM27926v1 Institute for Genome Sciences GCA_000279265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/265/GCF_000279265.1_ASM27926v1/ na na na haploid bacteria 4092530 4092530 47.500000 0 13 13 NCBI RefSeq GCF_000279265.1-RS_2025_12_23 2025-12-23 3766 3592 137 na GCF_000279285.1 PRJNA224116 SAMN00621717 ALED00000000.1 na 991946 666 Vibrio cholerae HE-45 strain=HE45 na latest Contig Major Full 2012-07-18 ASM27928v1 Institute for Genome Sciences GCA_000279285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/285/GCF_000279285.1_ASM27928v1/ na na na haploid bacteria 4125202 4125202 47.500000 0 29 29 NCBI RefSeq GCF_000279285.1-RS_2024_12_10 2024-12-10 3763 3552 131 na GCF_000279305.1 PRJNA224116 SAMN00622029 ALDA00000000.1 na 991923 666 Vibrio cholerae CP1032(5) strain=CP1032(5) na latest Contig Major Full 2012-07-18 ASM27930v1 Institute for Genome Sciences GCA_000279305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/305/GCF_000279305.1_ASM27930v1/ na na na haploid bacteria 3971467 3971467 47.500000 0 17 17 NCBI RefSeq GCF_000279305.1-RS_2024_12_10 2024-12-10 3646 3477 112 26980836 GCF_000279325.1 PRJNA224116 SAMN00622028 ALDC00000000.1 na 991925 666 Vibrio cholerae CP1038(11) strain=CP1038(11) na latest Contig Major Full 2012-07-18 ASM27932v1 Institute for Genome Sciences GCA_000279325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/325/GCF_000279325.1_ASM27932v1/ na na na haploid bacteria 4058268 4058268 47.500000 0 18 18 NCBI RefSeq GCF_000279325.1-RS_2026_04_21 2026-04-21 3731 3573 107 na GCF_000279345.1 PRJNA224116 SAMN00622036 ALDF00000000.1 na 991927 666 Vibrio cholerae CP1042(15) strain=CP1042(15) na latest Contig Major Full 2012-07-18 ASM27934v1 Institute for Genome Sciences GCA_000279345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/345/GCF_000279345.1_ASM27934v1/ na na na haploid bacteria 4045377 4045377 47.500000 0 20 20 NCBI RefSeq GCF_000279345.1-RS_2026_04_21 2026-04-21 3727 3565 106 na GCF_000279375.1 PRJNA224116 SAMN00622025 ALDZ00000000.1 na 991976 666 Vibrio cholerae HC-57A2 strain=HC-57A2 na latest Scaffold Major Full 2012-07-25 ASM27937v1 Institute for Genome Sciences GCA_000279375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/375/GCF_000279375.1_ASM27937v1/ na na na haploid bacteria 4025386 4018246 47.500000 0 105 222 NCBI RefSeq GCF_000279375.1-RS_2026_07_03 2026-07-03 3750 3594 77 na GCF_000279395.1 PRJNA224116 SAMN00622022 ALDJ00000000.1 na 991929 666 Vibrio cholerae CP1048(21) strain=CP1048(21) na latest Contig Major Full 2012-07-18 ASM27939v1 Institute for Genome Sciences GCA_000279395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/395/GCF_000279395.1_ASM27939v1/ na na na haploid bacteria 4091990 4091990 47.500000 0 27 27 NCBI RefSeq GCF_000279395.1-RS_2026_04_24 2026-04-24 3768 3559 133 na GCF_000279415.1 PRJNA224116 SAMN02435820 ALDL00000000.1 na 991932 666 Vibrio cholerae HC-20A2 strain=HC-20A2 na latest Contig Major Full 2012-07-18 ASM27941v1 Institute for Genome Sciences GCA_000279415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/415/GCF_000279415.1_ASM27941v1/ na na na haploid bacteria 4084542 4084542 47.500000 0 27 27 NCBI RefSeq GCF_000279415.1-RS_2026_04_23 2026-04-23 3765 3576 130 na GCF_000279435.1 PRJNA224116 SAMN00619210 ALDP00000000.1 na 991939 666 Vibrio cholerae HC-43B1 strain=HC-43B1 na latest Contig Major Full 2012-07-18 ASM27943v1 Institute for Genome Sciences GCA_000279435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/435/GCF_000279435.1_ASM27943v1/ na na na haploid bacteria 3931831 3931831 47.500000 0 20 20 NCBI RefSeq GCF_000279435.1-RS_2026_04_24 2026-04-24 3586 3384 124 na GCF_000279455.1 PRJNA224116 SAMN00621720 ALDQ00000000.1 na 991940 666 Vibrio cholerae HC-46A1 strain=HC-46A1 na latest Contig Major Full 2012-07-18 ASM27945v1 Institute for Genome Sciences GCA_000279455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/455/GCF_000279455.1_ASM27945v1/ na na na haploid bacteria 4120976 4120976 47.500000 0 25 25 NCBI RefSeq GCF_000279455.1-RS_2026_02_15 2026-02-15 3803 3601 140 na GCF_000279495.1 PRJNA224116 SAMN00773079 ALCJ00000000.1 na 1069627 1313 Streptococcus pneumoniae GA04672 strain=GA04672 na latest Contig Major Full 2012-07-18 ASM27949v1 Institute for Genome Sciences GCA_000279495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/495/GCF_000279495.1_ASM27949v1/ na na na haploid bacteria 2135761 2135761 39.500000 0 9 9 NCBI RefSeq GCF_000279495.1-RS_2026_01_01 2026-01-01 2198 1935 85 na GCF_000279515.1 PRJNA224116 SAMN00773088 ALCL00000000.1 na 1105120 1313 Streptococcus pneumoniae GA60190 strain=GA60190 na latest Contig Major Full 2012-07-18 ASM27951v1 Institute for Genome Sciences GCA_000279515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/515/GCF_000279515.1_ASM27951v1/ na na na haploid bacteria 2104178 2104178 40.000000 0 10 10 NCBI RefSeq GCF_000279515.1-RS_2025_12_28 2025-12-28 2172 1932 81 na GCF_000279535.1 PRJNA224116 SAMN00811524 ALCH00000000.1 na 1159208 68892 Streptococcus infantis SPAR10 strain=SPAR10 na latest Contig Major Full 2012-07-18 ASM27953v1 Institute for Genome Sciences GCA_000279535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/535/GCF_000279535.1_ASM27953v1/ na na na haploid bacteria 1758646 1758646 39.500000 0 10 10 NCBI RefSeq GCF_000279535.1-RS_2026_02_17 2026-02-17 1750 1625 81 na GCF_000279555.1 PRJNA224116 SAMN00622033 ALCZ00000000.1 na 991990 666 Vibrio cholerae CP1030(3) strain=CP1030(3) na latest Scaffold Major Full 2012-07-25 ASM27955v1 Institute for Genome Sciences GCA_000279555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/555/GCF_000279555.1_ASM27955v1/ na na na haploid bacteria 4010577 4002871 47.500000 0 116 235 NCBI RefSeq GCF_000279555.1-RS_2026_01_10 2026-01-10 3751 3582 76 26980836 GCF_000279575.1 PRJNA224116 SAMN00761083 ALCI00000000.1 na 760785 1313 Streptococcus pneumoniae GA17301 strain=GA17301 na latest Contig Major Full 2012-07-18 ASM27957v1 Institute for Genome Sciences GCA_000279575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/575/GCF_000279575.1_ASM27957v1/ na na na haploid bacteria 2139666 2139666 39.500000 0 10 10 NCBI RefSeq GCF_000279575.1-RS_2026_01_01 2026-01-01 2220 1956 83 na GCF_000279595.1 PRJNA224116 SAMN00839656 ALCY00000000.1 na 760841 1313 Streptococcus pneumoniae GA47562 strain=GA47562 na latest Contig Major Full 2012-07-18 ASM27959v1 Institute for Genome Sciences GCA_000279595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/595/GCF_000279595.1_ASM27959v1/ na na na haploid bacteria 2063325 2063325 40.000000 0 12 12 NCBI RefSeq GCF_000279595.1-RS_2026_01_01 2026-01-01 2143 1885 81 na GCF_000279695.1 PRJNA224116 SAMN00773089 ALCM00000000.1 na 1105121 1313 Streptococcus pneumoniae GA58771 strain=GA58771 na latest Contig Major Full 2012-07-18 ASM27969v1 Institute for Genome Sciences GCA_000279695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/695/GCF_000279695.1_ASM27969v1/ na na na haploid bacteria 2090648 2090648 40.000000 0 15 15 NCBI RefSeq GCF_000279695.1-RS_2025_12_30 2025-12-30 2152 1908 78 na GCF_000279715.1 PRJNA224116 SAMN00773651 ALCN00000000.1 na 1105115 1313 Streptococcus pneumoniae GA54354 strain=GA54354 na latest Contig Major Full 2012-07-18 ASM27971v1 Institute for Genome Sciences GCA_000279715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/715/GCF_000279715.1_ASM27971v1/ na na na haploid bacteria 2100907 2100907 39.500000 0 8 8 NCBI RefSeq GCF_000279715.1-RS_2025_12_28 2025-12-28 2179 1942 77 na GCF_000279735.1 PRJNA224116 SAMN00784009 ALCO00000000.1 na 1105117 1313 Streptococcus pneumoniae GA56348 strain=GA56348 na latest Contig Major Full 2012-07-18 ASM27973v1 Institute for Genome Sciences GCA_000279735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/735/GCF_000279735.1_ASM27973v1/ na na na haploid bacteria 2147425 2147425 39.500000 0 15 15 NCBI RefSeq GCF_000279735.1-RS_2026_01_01 2026-01-01 2237 1973 86 na GCF_000279755.1 PRJNA224116 SAMN00773653 ALCP00000000.1 na 1105116 1313 Streptococcus pneumoniae GA56113 strain=GA56113 na latest Contig Major Full 2012-07-18 ASM27975v1 Institute for Genome Sciences GCA_000279755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/755/GCF_000279755.1_ASM27975v1/ na na na haploid bacteria 2153230 2153230 39.500000 0 11 11 NCBI RefSeq GCF_000279755.1-RS_2026_01_03 2026-01-03 2234 1965 81 na GCF_000279775.1 PRJNA224116 SAMN00773090 ALCQ00000000.1 na 1105118 1313 Streptococcus pneumoniae GA58581 strain=GA58581 na latest Contig Major Full 2012-07-18 ASM27977v1 Institute for Genome Sciences GCA_000279775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/775/GCF_000279775.1_ASM27977v1/ na na na haploid bacteria 2124127 2124127 39.500000 0 14 14 NCBI RefSeq GCF_000279775.1-RS_2026_06_22 2026-06-22 2166 1887 81 na GCF_000279785.1 PRJNA224116 SAMN00622046 ALDI00000000.1 na 991995 666 Vibrio cholerae CP1047(20) strain=CP1047 na latest Scaffold Major Full 2012-07-25 ASM27978v1 Institute for Genome Sciences GCA_000279785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/785/GCF_000279785.1_ASM27978v1/ na na na haploid bacteria 4039784 4034035 47.500000 0 123 203 NCBI RefSeq GCF_000279785.1-RS_2026_01_04 2026-01-04 3769 3611 77 na GCF_000279815.1 PRJNA224116 SAMN00773091 ALCR00000000.1 na 1105119 1313 Streptococcus pneumoniae GA60080 strain=GA60080 na latest Contig Major Full 2012-07-18 ASM27981v1 Institute for Genome Sciences GCA_000279815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/815/GCF_000279815.1_ASM27981v1/ na na na haploid bacteria 2103083 2103083 39.500000 0 26 26 NCBI RefSeq GCF_000279815.1-RS_2026_01_03 2026-01-03 2213 1951 71 na GCF_000279835.1 PRJNA224116 SAMN00792350 ALCS00000000.1 na 760802 1313 Streptococcus pneumoniae GA19998 strain=GA19998 na latest Contig Major Full 2012-07-18 ASM27983v1 Institute for Genome Sciences GCA_000279835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/835/GCF_000279835.1_ASM27983v1/ na na na haploid bacteria 2137965 2137965 40.000000 0 7 7 NCBI RefSeq GCF_000279835.1-RS_2026_06_18 2026-06-18 2222 1956 87 na GCF_000279855.1 PRJNA224116 SAMN00792354 ALCT00000000.1 na 760788 1313 Streptococcus pneumoniae GA17484 strain=GA17484 na latest Contig Major Full 2012-07-18 ASM27985v1 Institute for Genome Sciences GCA_000279855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/855/GCF_000279855.1_ASM27985v1/ na na na haploid bacteria 2037743 2037743 40.000000 0 6 6 NCBI RefSeq GCF_000279855.1-RS_2025_08_18 2025-08-18 2092 1844 82 na GCF_000279875.1 PRJNA224116 SAMN00792351 ALCU00000000.1 na 1131630 1313 Streptococcus pneumoniae GA62331 strain=GA62331 na latest Contig Major Full 2012-07-18 ASM27987v1 Institute for Genome Sciences GCA_000279875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/875/GCF_000279875.1_ASM27987v1/ na na na haploid bacteria 2189095 2189095 39.500000 0 11 11 NCBI RefSeq GCF_000279875.1-RS_2026_02_04 2026-02-04 2288 2031 88 na GCF_000279895.1 PRJNA224116 SAMN00792353 ALCV00000000.1 na 1131627 1313 Streptococcus pneumoniae GA60132 strain=GA60132 na latest Contig Major Full 2012-07-18 ASM27989v1 Institute for Genome Sciences GCA_000279895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/895/GCF_000279895.1_ASM27989v1/ na na na haploid bacteria 2181559 2181559 39.500000 0 15 15 NCBI RefSeq GCF_000279895.1-RS_2026_02_04 2026-02-04 2271 2020 77 na GCF_000279915.1 PRJNA224116 SAMN00792349 ALCW00000000.1 na 1131629 1313 Streptococcus pneumoniae GA62681 strain=GA62681 na latest Contig Major Full 2012-07-18 ASM27991v1 Institute for Genome Sciences GCA_000279915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/915/GCF_000279915.1_ASM27991v1/ na na na haploid bacteria 2140079 2140079 39.500000 0 14 14 NCBI RefSeq GCF_000279915.1-RS_2025_12_30 2025-12-30 2181 1927 83 na GCF_000279935.1 PRJNA224116 SAMN00792355 ALCX00000000.1 na 1131628 1313 Streptococcus pneumoniae GA58981 strain=GA58981 na latest Contig Major Full 2012-07-18 ASM27993v1 Institute for Genome Sciences GCA_000279935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/935/GCF_000279935.1_ASM27993v1/ na na na haploid bacteria 2241102 2241102 39.500000 0 20 20 NCBI RefSeq GCF_000279935.1-RS_2025_04_24 2025-04-24 2302 2029 79 na GCF_000279955.1 PRJNA224116 SAMN00622039 ALDR00000000.1 na 992003 666 Vibrio cholerae HC-47A1 strain=HC-47A1 na latest Scaffold Major Full 2012-07-25 ASM27995v1 Institute for Genome Sciences GCA_000279955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/955/GCF_000279955.1_ASM27995v1/ na na na haploid bacteria 4031718 4021767 47.500000 0 110 232 NCBI RefSeq GCF_000279955.1-RS_2025_04_18 2025-04-18 3773 3584 85 na GCF_000279975.1 PRJNA224116 SAMN02469584 AKXI00000000.1 na 1196653 155615 Fusobacterium vincentii ATCC 51190 strain=ATCC 51190 na latest Contig Major Full 2012-07-16 ASM27997v1 Chosun University GCA_000279975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/975/GCF_000279975.1_ASM27997v1/ na assembly from heterotypic synonym type material na haploid bacteria 1837113 1837113 27.000000 0 198 198 NCBI RefSeq GCF_000279975.1-RS_2026_04_02 2026-04-02 1887 1694 63 22965077 GCF_000279995.1 PRJNA224116 SAMN02596911 AIMG00000000.1 na 1094559 373638 Bartonella tamiae Th307 strain=Th307 na latest Scaffold Major Full 2012-07-25 Bart_tami_Th307_V1 Broad Institute GCA_000279995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/279/995/GCF_000279995.1_Bart_tami_Th307_V1/ na na na haploid bacteria 2254945 2245003 38.000000 0 1 10 NCBI RefSeq GCF_000279995.1-RS_2026_04_29 2026-04-29 2042 1933 57 na GCF_000280015.1 PRJNA224116 SAMN02596909 AIME00000000.1 na 1094551 52764 Bartonella alsatica IBS 382 strain=IBS 382 na latest Scaffold Major Full 2012-07-25 Bart_alsa_IBS_382_V1 Broad Institute GCA_000280015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/015/GCF_000280015.1_Bart_alsa_IBS_382_V1/ na assembly from type material na haploid bacteria 1673902 1646119 37.000000 0 1 21 NCBI RefSeq GCF_000280015.1-RS_2026_04_29 2026-04-29 1410 1291 58 na GCF_000280035.1 PRJNA215743 SAMN03081437 na reference genome 1178016 571949 Encephalitozoon romaleae SJ-2008 strain=SJ-2008 na latest Chromosome Major Full 2012-07-19 ASM28003v2 University of Ottawa GCA_000280035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/035/GCF_000280035.1_ASM28003v2/ na na na haploid fungi 2187595 2187595 40.500000 11 13 13 University of Ottawa Annotation submitted by University of Ottawa 2017-06-02 1883 1831 51 22802648 GCF_000280055.1 PRJNA224116 SAMN02470205 ALAB00000000.1 reference genome 1197174 453835 Alishewanella aestuarii B11 strain=B11 na latest Contig Major Full 2012-07-19 ASM28005v1 Korea University GCA_000280055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/055/GCF_000280055.1_ASM28005v1/ na assembly from type material na haploid bacteria 3588054 3588054 51.000000 0 43 43 NCBI RefSeq GCF_000280055.1-RS_2026_03_28 2026-03-28 3389 3291 78 22965096 GCF_000280075.1 PRJNA224116 SAMN01041114 ALEI00000000.1 na 887064 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 622731-39 strain=622731-39 na latest Contig Major Full 2012-07-18 ASM28007v1 FDA GCA_000280075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/075/GCF_000280075.1_ASM28007v1/ na na na haploid bacteria 4729779 4729779 52.000000 0 56 56 NCBI RefSeq GCF_000280075.1-RS_2025_06_04 2025-06-04 4666 4367 89 23045502 GCF_000280095.1 PRJNA224116 SAMN01041120 ALEJ00000000.1 na 887065 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 639016-6 strain=639016-6 na latest Contig Major Full 2012-07-18 ASM28009v1 FDA GCA_000280095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/095/GCF_000280095.1_ASM28009v1/ na na na haploid bacteria 4729743 4729743 52.000000 0 52 52 NCBI RefSeq GCF_000280095.1-RS_2025_04_15 2025-04-15 4653 4364 84 23045502 GCF_000280115.1 PRJNA224116 SAMN01041123 ALEK00000000.1 na 887066 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 640631 strain=640631 na latest Contig Major Full 2012-07-18 ASM28011v1 FDA GCA_000280115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/115/GCF_000280115.1_ASM28011v1/ na na na haploid bacteria 4690769 4690769 52.000000 0 45 45 NCBI RefSeq GCF_000280115.1-RS_2025_06_04 2025-06-04 4612 4316 88 23045502 GCF_000280135.1 PRJNA224116 SAMN01041142 ALEL00000000.1 na 891411 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 77-0424 strain=77-0424 na latest Contig Major Full 2012-07-18 ASM28013v1 FDA GCA_000280135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/135/GCF_000280135.1_ASM28013v1/ na na na haploid bacteria 4693823 4693823 52.000000 0 43 43 NCBI RefSeq GCF_000280135.1-RS_2025_06_02 2025-06-02 4617 4333 89 23045502 GCF_000280155.1 PRJNA224116 SAMN01041109 ALEM00000000.1 na 891413 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 607307-6 strain=607307-6 na latest Contig Major Full 2012-07-18 ASM28015v1 FDA GCA_000280155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/155/GCF_000280155.1_ASM28015v1/ na na na haploid bacteria 4729067 4729067 52.000000 0 52 52 NCBI RefSeq GCF_000280155.1-RS_2025_06_04 2025-06-04 4667 4347 90 23045502 GCF_000280175.1 PRJNA224116 SAMN01041093 ALEN00000000.1 na 910413 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 485549-17 strain=485549-17 na latest Contig Major Full 2012-07-18 ASM28017v1 FDA GCA_000280175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/175/GCF_000280175.1_ASM28017v1/ na na na haploid bacteria 4698079 4698079 52.000000 0 39 39 NCBI RefSeq GCF_000280175.1-RS_2025_04_26 2025-04-26 4611 4330 77 23045502 GCF_000280195.1 PRJNA224116 SAMN01041105 ALEO00000000.1 na 910414 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 596866-22 strain=596866-22 na latest Contig Major Full 2012-07-18 ASM28019v1 FDA GCA_000280195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/195/GCF_000280195.1_ASM28019v1/ na na na haploid bacteria 4694091 4694091 52.000000 0 38 38 NCBI RefSeq GCF_000280195.1-RS_2026_03_21 2026-03-21 4611 4329 86 23045502 GCF_000280215.1 PRJNA224116 SAMN01041106 ALEP00000000.1 na 910415 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 596866-70 strain=596866-70 na latest Contig Major Full 2012-07-18 ASM28021v1 FDA GCA_000280215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/215/GCF_000280215.1_ASM28021v1/ na na na haploid bacteria 4692543 4692543 52.000000 0 41 41 NCBI RefSeq GCF_000280215.1-RS_2025_12_01 2025-12-01 4616 4329 90 23045502 GCF_000280235.1 PRJNA224116 SAMN01041116 ALEQ00000000.1 na 910416 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 629164-26 strain=629164-26 na latest Contig Major Full 2012-07-18 ASM28023v1 FDA GCA_000280235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/235/GCF_000280235.1_ASM28023v1/ na na na haploid bacteria 4633066 4633066 52.000000 0 30 30 NCBI RefSeq GCF_000280235.1-RS_2025_04_26 2025-04-26 4524 4261 80 23045502 GCF_000280255.1 PRJNA224116 SAMN01041117 ALER00000000.1 na 910417 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 629164-37 strain=629164-37 na latest Contig Major Full 2012-07-18 ASM28025v1 FDA GCA_000280255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/255/GCF_000280255.1_ASM28025v1/ na na na haploid bacteria 4697876 4697876 52.000000 0 50 50 NCBI RefSeq GCF_000280255.1-RS_2025_04_26 2025-04-26 4625 4336 90 23045502 GCF_000280275.1 PRJNA224116 SAMN01041121 ALES00000000.1 na 910418 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 639672-46 strain=639672-46 na latest Contig Major Full 2012-07-18 ASM28027v1 FDA GCA_000280275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/275/GCF_000280275.1_ASM28027v1/ na na na haploid bacteria 4690226 4690226 52.000000 0 50 50 NCBI RefSeq GCF_000280275.1-RS_2026_03_21 2026-03-21 4605 4321 78 23045502 GCF_000280295.1 PRJNA224116 SAMN01041122 ALET00000000.1 na 910419 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 639672-50 strain=639672-50 na latest Contig Major Full 2012-07-18 ASM28029v1 FDA GCA_000280295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/295/GCF_000280295.1_ASM28029v1/ na na na haploid bacteria 4698120 4698120 52.000000 0 42 42 NCBI RefSeq GCF_000280295.1-RS_2025_06_04 2025-06-04 4619 4315 89 23045502 GCF_000280315.2 PRJNA224116 SAMN01041143 na na 926034 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 strain=77-1427 na latest Complete Genome Major Full 2014-05-06 ASM28031v2 FDA GCA_000280315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/315/GCF_000280315.2_ASM28031v2/ na na na haploid bacteria 4718680 4718680 52.000000 2 2 2 NCBI RefSeq GCF_000280315.2-RS_2025_04_18 2025-04-18 4608 4327 122 23045502 GCF_000280335.1 PRJNA224116 SAMN01041144 ALEV00000000.1 na 926035 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 77-2659 strain=77-2659 na latest Contig Major Full 2012-07-18 ASM28033v1 FDA GCA_000280335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/335/GCF_000280335.1_ASM28033v1/ na na na haploid bacteria 4696012 4696012 52.000000 0 43 43 NCBI RefSeq GCF_000280335.1-RS_2025_06_01 2025-06-01 4613 4326 83 23045502 GCF_000280355.1 PRJNA224116 SAMN01041145 ALEW00000000.1 na 926036 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 78-1757 strain=78-1757 na latest Contig Major Full 2012-07-18 ASM28035v1 FDA GCA_000280355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/355/GCF_000280355.1_ASM28035v1/ na na na haploid bacteria 4695879 4695879 52.000000 0 40 40 NCBI RefSeq GCF_000280355.1-RS_2025_04_26 2025-04-26 4616 4337 90 23045502 GCF_000280375.1 PRJNA224116 SAMN01041087 ALEX00000000.1 na 926037 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 22510-1 strain=22510-1 na latest Contig Major Full 2012-07-18 ASM28037v1 FDA GCA_000280375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/375/GCF_000280375.1_ASM28037v1/ na na na haploid bacteria 4692600 4692600 52.000000 0 39 39 NCBI RefSeq GCF_000280375.1-RS_2025_04_26 2025-04-26 4605 4328 82 23045502 GCF_000280395.1 PRJNA224116 SAMN01041148 ALEY00000000.1 na 930769 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 8b-1 strain=8b-1 na latest Contig Major Full 2012-07-18 ASM28039v1 FDA GCA_000280395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/395/GCF_000280395.1_ASM28039v1/ na na na haploid bacteria 4777624 4777624 52.000000 0 42 42 NCBI RefSeq GCF_000280395.1-RS_2026_01_07 2026-01-07 4722 4417 96 23045502 GCF_000280415.1 PRJNA224116 SAMN01041137 ALEZ00000000.1 na 984228 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648905 5-18 strain=648905 5-18 na latest Contig Major Full 2012-07-18 ASM28041v1 FDA GCA_000280415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/415/GCF_000280415.1_ASM28041v1/ na na na haploid bacteria 4692738 4692738 52.000000 0 53 53 NCBI RefSeq GCF_000280415.1-RS_2025_06_04 2025-06-04 4622 4319 92 23045502 GCF_000280435.1 PRJNA224116 SAMN01041133 ALFA00000000.1 na 984230 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 6-18 strain=648901 6-18 na latest Contig Major Full 2012-07-18 ASM28043v1 FDA GCA_000280435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/435/GCF_000280435.1_ASM28043v1/ na na na haploid bacteria 4732648 4732648 52.000000 0 55 55 NCBI RefSeq GCF_000280435.1-RS_2025_06_04 2025-06-04 4682 4358 96 23045502 GCF_000280455.1 PRJNA224116 SAMN01041094 ALFB00000000.1 na 1090945 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 50-3079 strain=50-3079 na latest Contig Major Full 2012-07-18 ASM28045v1 FDA GCA_000280455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/455/GCF_000280455.1_ASM28045v1/ na na na haploid bacteria 4692433 4692433 52.000000 0 45 45 NCBI RefSeq GCF_000280455.1-RS_2025_04_26 2025-04-26 4605 4315 85 23045502 GCF_000280475.1 PRJNA224116 SAMN01041104 ALFC00000000.1 na 1116476 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 58-6482 strain=58-6482 na latest Contig Major Full 2012-07-18 ASM28047v1 FDA GCA_000280475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/475/GCF_000280475.1_ASM28047v1/ na na na haploid bacteria 4702429 4702429 52.000000 0 46 46 NCBI RefSeq GCF_000280475.1-RS_2025_04_26 2025-04-26 4611 4256 79 23045502 GCF_000280495.2 PRJNA224116 SAMN02470245 na na 1177180 283686 Kosakonia radicincitans DSM 16656 strain=DSM 16656 na latest Complete Genome Major Full 2017-04-03 ASM28049v2 Leibniz-Institute of Vegetable and Ornamental Crpos GCA_000280495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/495/GCF_000280495.2_ASM28049v2/ na assembly from type material na haploid bacteria 6122453 6122453 53.500000 3 3 3 NCBI RefSeq GCF_000280495.2-RS_2025_07_08 2025-07-08 5943 5740 116 22965092 GCF_000280535.1 PRJNA224116 SAMN02470653 AKWA00000000.1 na 1200349 1520 Clostridium beijerinckii G117 strain=G117 na latest Scaffold Major Full 2012-07-30 CloBeiG117,1.0 National University of Singapore GCA_000280535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/535/GCF_000280535.1_CloBeiG117_1.0/ na na na haploid bacteria 5811816 5803412 29.500000 0 89 151 NCBI RefSeq GCF_000280535.1-RS_2026_04_21 2026-04-21 5178 5045 68 22965093 GCF_000280555.1 PRJNA224116 SAMN02470940 AKYE00000000.1 na 1200345 316 Stutzerimonas stutzeri XLDN-R strain=XLDN-R na latest Contig Major Full 2012-07-20 ASM28055v1 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000280555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/555/GCF_000280555.1_ASM28055v1/ na na na haploid bacteria 4695416 4695416 64.000000 0 167 167 NCBI RefSeq GCF_000280555.1-RS_2026_03_20 2026-03-20 4497 4343 68 23012282 GCF_000280575.1 PRJNA224116 SAMN02472171 ALAQ00000000.1 na 1176490 53407 Pseudomonas fuscovaginae CB98818 strain=CB98818 na latest Contig Major Full 2012-07-20 ASM28057v1 Zhejiang University GCA_000280575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/575/GCF_000280575.1_ASM28057v1/ na na na haploid bacteria 6541075 6541075 61.500000 0 261 261 NCBI RefSeq GCF_000280575.1-RS_2026_05_05 2026-05-05 6201 5149 78 22965098 GCF_000280595.1 PRJNA224116 SAMN02471410 AKVR00000000.1 na 1175632 36809 Mycobacteroides abscessus M139 strain=M139 na latest Contig Major Full 2012-07-20 ASM28059v1 Universiti Malaya, Kuala Lumpur GCA_000280595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/595/GCF_000280595.1_ASM28059v1/ na na na haploid bacteria 5046600 5046600 64.000000 0 42 42 NCBI RefSeq GCF_000280595.1-RS_2025_07_31 2025-07-31 4996 4871 53 23045507 GCF_000280615.1 PRJNA224116 SAMN02471411 AKVT00000000.1 na 1176125 36809 Mycobacteroides abscessus M152 strain=M152 na latest Contig Major Full 2012-07-20 ASM28061v1 Universiti Malaya, Kuala Lumpur GCA_000280615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/615/GCF_000280615.1_ASM28061v1/ na na na haploid bacteria 4911666 4911666 64.000000 0 45 45 NCBI RefSeq GCF_000280615.1-RS_2025_07_31 2025-07-31 4872 4731 53 23144407 GCF_000280635.2 PRJNA224116 SAMN02471418 AKVU00000000.1 na 1185414 36809 Mycobacteroides abscessus M156 strain=M156 na latest Contig Minor Full 2012-07-20 ASM28063v2 Universiti Malaya, Kuala Lumpur GCA_000280635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/635/GCF_000280635.2_ASM28063v2/ na na na haploid bacteria 5016396 5016396 64.000000 0 68 68 NCBI RefSeq GCF_000280635.2-RS_2025_04_21 2025-04-21 5036 4830 51 23405341 GCF_000280675.1 PRJNA225503 SAMN02981247 ADAH00000000.1 reference genome 655819 176275 Beauveria bassiana ARSEF 2860 strain=ARSEF 2860 na latest Scaffold Major Full 2012-08-14 ASM28067v1 Zhejiang University, China GCA_000280675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/675/GCF_000280675.1_ASM28067v1/ na na na haploid fungi 33693936 33594836 51.500000 0 235 1226 Zhejiang University, China Annotation submitted by Zhejiang University, China 2024-01-02 10364 10364 0 22761991 GCF_000280725.2 PRJNA224116 SAMN02471208 na na 745408 745408 Rhodococcus sp. JVH1 strain=JVH1 na latest Complete Genome Major Full 2024-08-19 TRU_JVH1_2.0 Thompson Rivers University GCA_000280725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/725/GCF_000280725.2_TRU_JVH1_2.0/ na na na haploid bacteria 9321263 9321263 67.000000 3 3 3 NCBI RefSeq GCF_000280725.2-RS_2024_08_20 2024-08-20 8725 8347 66 22965106 GCF_000280745.1 PRJNA224116 SAMN00991725 AJLX00000000.1 na 1144272 1280 Staphylococcus aureus subsp. aureus GR1 strain=GR1 na latest Contig Major Full 2012-07-23 S.aureus GR1 1.0 National Center for Biological Sciences GCA_000280745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/745/GCF_000280745.1_S.aureus_GR1_1.0/ na na na haploid bacteria 2801945 2801945 32.500000 0 68 68 NCBI RefSeq GCF_000280745.1-RS_2025_04_15 2025-04-15 2818 2712 23 23209210 GCF_000280765.1 PRJNA224116 SAMN02471742 AKBP00000000.1 na 707248 117681 Pseudomonas gingeri NCPPB 3146 = LMG 5327 strain=NCPPB 3146 na latest Scaffold Major Full 2012-07-30 ASM28076v1 University of Oxford GCA_000280765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/765/GCF_000280765.1_ASM28076v1/ na assembly from type material na haploid bacteria 7666642 7571741 62.500000 0 75 1036 NCBI RefSeq GCF_000280765.1-RS_2026_04_03 2026-04-03 7377 7079 49 na GCF_000280785.1 PRJNA224116 SAMN02471740 AKBQ00000000.1 na 690598 46677 Pseudomonas agarici NCPPB 2289 strain=NCPPB 2289 na latest Scaffold Major Full 2012-07-30 ASM28078v1 The Sainsbury Laboratory GCA_000280785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/785/GCF_000280785.1_ASM28078v1/ na assembly from type material na haploid bacteria 5511386 5449067 59.000000 0 119 699 NCBI RefSeq GCF_000280785.1-RS_2026_05_16 2026-05-16 5265 4933 63 na GCF_000280865.2 PRJNA224116 SAMN02472162 na na 1160718 114687 Streptomyces auratus AGR0001 strain=AGR0001 na latest Complete Genome Major Full 2021-04-21 ASM28086v2 Yunnan Institution of Microbiology, Yunnan University GCA_000280865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/865/GCF_000280865.2_ASM28086v2/ na na na haploid bacteria 7901452 7901452 71.500000 1 1 1 NCBI RefSeq GCF_000280865.2-RS_2026_05_07 2026-05-07 6802 6585 89 22965094 GCF_000280885.2 PRJNA224116 SAMN02470512 AKXW00000000.2 na 1205908 553239 Vibrio breoganii 1C10 strain=1C10 na latest Scaffold Major Full 2016-09-16 ASM28088v2 MIT GCA_000280885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/885/GCF_000280885.2_ASM28088v2/ na na na haploid bacteria 4146244 4146124 45.000000 0 169 181 NCBI RefSeq GCF_000280885.2-RS_2026_04_03 2026-04-03 3804 3658 68 na GCF_000280925.3 PRJNA224116 SAMN02469988 na reference genome 1297742 1297742 Pseudomyxococcus hansupus strain=contaminant ex DSM 436 na latest Complete Genome Major Full 2015-07-16 ASM28092v3 Institute of Microbial Technology GCA_000280925.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/280/925/GCF_000280925.3_ASM28092v3/ na assembly from type material na haploid bacteria 9490432 9490432 69.000000 1 1 1 NCBI RefSeq GCF_000280925.3-RS_2026_03_30 2026-03-30 7643 7431 86 26900859 GCF_000281065.1 PRJNA224116 SAMN02470964 AKKK00000000.1 na 1197706 1197706 Arthrobacter sp. M2012083 strain=M2012083 na latest Contig Major Full 2012-07-23 ASM28106v1 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000281065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/065/GCF_000281065.1_ASM28106v1/ na na na haploid bacteria 4629172 4629172 62.000000 0 67 67 NCBI RefSeq GCF_000281065.1-RS_2024_07_01 2024-07-01 4303 4208 61 23012289 GCF_000281085.1 PRJNA224116 SAMN02470761 AJWM00000000.1 reference genome 659495 1172192 Catenovulum agarivorans YM01 strain=YM01 na latest Scaffold Major Full 2012-07-31 ASM28108v1 Ocean University of China GCA_000281085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/085/GCF_000281085.1_ASM28108v1/ na assembly from type material na haploid bacteria 5032676 5025099 40.000000 0 70 141 NCBI RefSeq GCF_000281085.1-RS_2026_03_20 2026-03-20 4164 4072 62 22965101 GCF_000281105.1 PRJNA245130 SAMN00989094 AJKL00000000.1 reference genome 1168221 61459 Coniosporium apollinis CBS 100218 strain=CBS 100218 na latest Scaffold Major Full 2012-07-31 Coni_apol_CBS100218 _V1 Broad Institute GCA_000281105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/105/GCF_000281105.1_Coni_apol_CBS100218_V1/ na na na haploid fungi 28645321 28506104 52.000000 0 169 241 Broad Institute Annotation submitted by Broad Institute 2024-01-02 9367 9308 55 na GCF_000281145.1 PRJNA224116 SAMN00839622 AJWE00000000.1 na 1144314 1144314 Rhizobium sp. CF142 strain=CF142 na latest Contig Major Full 2012-07-24 Rhizobium.strCF142_v1.0 Oak Ridge National Lab GCA_000281145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/145/GCF_000281145.1_Rhizobium.strCF142_v1.0/ na na na haploid bacteria 7457089 7457089 60.000000 0 150 150 NCBI RefSeq GCF_000281145.1-RS_2024_06_01 2024-06-01 7294 7078 52 23045501 GCF_000281175.1 PRJNA224116 SAMD00061033 na reference genome 926550 133453 Caldilinea aerophila DSM 14535 = NBRC 104270 strain=DSM 14535 na latest Complete Genome Major Full 2012-03-28 ASM28117v1 National Institute of Technology and Evaluation GCA_000281175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/175/GCF_000281175.1_ASM28117v1/ na assembly from type material na haploid bacteria 5144873 5144873 59.000000 1 1 1 NCBI RefSeq GCF_000281175.1-RS_2025_12_11 2025-12-11 4152 4064 57 na GCF_000281195.1 PRJNA224116 SAMN02603765 na na 1206105 1351 Enterococcus faecalis D32 strain=D32 na latest Complete Genome Major Full 2012-07-24 ASM28119v1 Robert Koch Institute GCA_000281195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/195/GCF_000281195.1_ASM28119v1/ na na na haploid bacteria 3062505 3062505 37.500000 3 3 3 NCBI RefSeq GCF_000281195.1-RS_2026_03_28 2026-03-28 3040 2890 79 22965105 GCF_000281215.1 PRJNA224116 SAMN02603217 na na 1196325 303 Pseudomonas putida DOT-T1E strain=DOT-T1E na latest Complete Genome Major Full 2012-07-24 ASM28121v1 EEZ-CSIC GCA_000281215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/215/GCF_000281215.1_ASM28121v1/ na na na haploid bacteria 6260702 6260702 61.500000 1 1 1 NCBI RefSeq GCF_000281215.1-RS_2025_06_10 2025-06-10 5877 5489 68 na GCF_000281255.1 PRJNA224116 SAMN01057609 AJZV00000000.1 na 1087441 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH2 strain=KPNIH2 na latest Contig Major Full 2012-07-24 KPNIH2_1 NIH Intramural Sequencing Center GCA_000281255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/255/GCF_000281255.1_KPNIH2_1/ na na na haploid bacteria 5724800 5724800 57.000000 0 147 147 NCBI RefSeq GCF_000281255.1-RS_2025_01_05 2025-01-05 5864 5549 132 22914622 GCF_000281275.1 PRJNA224116 SAMN01057607 AJZX00000000.1 na 1087444 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH5 strain=KPNIH5 na latest Contig Major Full 2012-07-24 KPNIH5_1 NIH Intramural Sequencing Center GCA_000281275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/275/GCF_000281275.1_KPNIH5_1/ na na na haploid bacteria 5716297 5716297 57.000000 0 168 168 NCBI RefSeq GCF_000281275.1-RS_2025_01_05 2025-01-05 5867 5532 119 22914622 GCF_000281295.1 PRJNA224116 SAMN01057608 AJZY00000000.1 na 1087445 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH6 strain=KPNIH6 na latest Contig Major Full 2012-07-24 KPNIH6_1 NIH Intramural Sequencing Center GCA_000281295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/295/GCF_000281295.1_KPNIH6_1/ na na na haploid bacteria 5714943 5714943 57.000000 0 149 149 NCBI RefSeq GCF_000281295.1-RS_2025_01_05 2025-01-05 5851 5534 128 22914622 GCF_000281315.1 PRJNA224116 SAMN01057613 AKAB00000000.1 na 1094169 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH9 strain=KPNIH9 na latest Contig Major Full 2012-07-24 KPNIH9_1 NISC GCA_000281315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/315/GCF_000281315.1_KPNIH9_1/ na na na haploid bacteria 5720331 5720331 57.000000 0 115 115 NCBI RefSeq GCF_000281315.1-RS_2025_01_05 2025-01-05 5839 5552 123 22914622 GCF_000281335.1 PRJNA224116 SAMN01057621 AKAE00000000.1 na 1128946 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH12 strain=KPNIH12 na latest Contig Major Full 2012-07-24 KPNIH12_1 NISC GCA_000281335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/335/GCF_000281335.1_KPNIH12_1/ na na na haploid bacteria 5719358 5719358 57.000000 0 164 164 NCBI RefSeq GCF_000281335.1-RS_2025_01_05 2025-01-05 5873 5497 122 22914622 GCF_000281355.1 PRJNA224116 SAMN01057646 AKAH00000000.1 na 1128951 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH17 strain=KPNIH17 na latest Contig Major Full 2012-07-24 KPNIH17_1 NISC GCA_000281355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/355/GCF_000281355.1_KPNIH17_1/ na na na haploid bacteria 5715795 5715795 57.000000 0 137 137 NCBI RefSeq GCF_000281355.1-RS_2025_01_05 2025-01-05 5859 5553 121 22914622 GCF_000281375.1 PRJNA224116 SAMN01057650 AKAK00000000.1 na 1128954 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH20 strain=KPNIH20 na latest Contig Major Full 2012-07-24 KPNIH20_1 NISC GCA_000281375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/375/GCF_000281375.1_KPNIH20_1/ na na na haploid bacteria 5724448 5724448 57.000000 0 155 155 NCBI RefSeq GCF_000281375.1-RS_2025_01_05 2025-01-05 5862 5442 125 22914622 GCF_000281395.1 PRJNA224116 SAMN01057606 AJZW00000000.1 na 1087443 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH4 strain=KPNIH4 na latest Contig Major Full 2012-07-24 KPNIH4_1 NIH Intramural Sequencing Center GCA_000281395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/395/GCF_000281395.1_KPNIH4_1/ na na na haploid bacteria 5718058 5718058 57.000000 0 173 173 NCBI RefSeq GCF_000281395.1-RS_2026_03_13 2026-03-13 5873 5547 123 22914622 GCF_000281415.1 PRJNA224116 SAMN01057711 AJZZ00000000.1 na 1094167 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH7 strain=KPNIH7 na latest Contig Major Full 2012-07-24 KPNIH7_1 NISC GCA_000281415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/415/GCF_000281415.1_KPNIH7_1/ na na na haploid bacteria 5723848 5723848 57.000000 0 160 160 NCBI RefSeq GCF_000281415.1-RS_2025_04_26 2025-04-26 5873 5547 126 22914622 GCF_000281435.2 PRJNA224116 SAMN01057614 na na 1094170 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 strain=KPNIH10 na latest Complete Genome Major Full 2014-05-27 ASM28143v2 NISC GCA_000281435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/435/GCF_000281435.2_ASM28143v2/ na na na haploid bacteria 5767822 5767822 57.000000 4 4 4 NCBI RefSeq GCF_000281435.2-RS_2025_01_05 2025-01-05 5796 5547 125 22914622 GCF_000281455.1 PRJNA224116 SAMN01057640 AKAF00000000.1 na 1128948 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH14 strain=KPNIH14 na latest Contig Major Full 2012-07-24 KPNIH14_1 NISC GCA_000281455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/455/GCF_000281455.1_KPNIH14_1/ na na na haploid bacteria 5723355 5723355 57.000000 0 165 165 NCBI RefSeq GCF_000281455.1-RS_2025_01_05 2025-01-05 5868 5417 114 22914622 GCF_000281475.1 PRJNA224116 SAMN01057635 AKAI00000000.1 na 1128952 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH18 strain=KPNIH18 na latest Contig Major Full 2012-07-24 KPNIH18_1 NISC GCA_000281475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/475/GCF_000281475.1_KPNIH18_1/ na na na haploid bacteria 5769474 5769474 57.000000 0 167 167 NCBI RefSeq GCF_000281475.1-RS_2025_01_05 2025-01-05 5928 5559 116 22914622;27353756 GCF_000281495.1 PRJNA224116 SAMN01057652 AKAL00000000.1 na 1168062 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH21 strain=KPNIH21 na latest Contig Major Full 2012-07-24 KPNIH21_1 NISC GCA_000281495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/495/GCF_000281495.1_KPNIH21_1/ na na na haploid bacteria 5757750 5757750 57.000000 0 178 178 NCBI RefSeq GCF_000281495.1-RS_2025_01_05 2025-01-05 5896 5576 130 22914622 GCF_000281515.1 PRJNA224116 SAMN01057658 AKAM00000000.1 na 1168063 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH22 strain=KPNIH22 na latest Contig Major Full 2012-07-24 KPNIH22_1 NISC GCA_000281515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/515/GCF_000281515.1_KPNIH22_1/ na na na haploid bacteria 5749696 5749696 57.000000 0 165 165 NCBI RefSeq GCF_000281515.1-RS_2025_01_05 2025-01-05 5887 5573 132 22914622 GCF_000281535.2 PRJNA224116 SAMN01057611 na na 1087440 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH1 strain=KPNIH1 na latest Complete Genome Major Full 2014-07-02 ASM28153v2 NIH Intramural Sequencing Center GCA_000281535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/535/GCF_000281535.2_ASM28153v2/ na na na haploid bacteria 5766615 5766615 57.000000 4 4 4 NCBI RefSeq GCF_000281535.2-RS_2025_01_05 2025-01-05 5797 5550 125 22914622 GCF_000281555.1 PRJNA224116 SAMN01057612 AKAA00000000.1 na 1094168 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH8 strain=KPNIH8 na latest Contig Major Full 2012-07-24 KPNIH8_1 NISC GCA_000281555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/555/GCF_000281555.1_KPNIH8_1/ na na na haploid bacteria 5714705 5714705 57.000000 0 182 182 NCBI RefSeq GCF_000281555.1-RS_2025_01_05 2025-01-05 5872 5528 126 22914622 GCF_000281575.1 PRJNA224116 SAMN01057620 AKAD00000000.1 na 1094171 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH11 strain=KPNIH11 na latest Contig Major Full 2012-07-24 KPNIH11_1 NISC GCA_000281575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/575/GCF_000281575.1_KPNIH11_1/ na na na haploid bacteria 5714016 5714016 57.000000 0 185 185 NCBI RefSeq GCF_000281575.1-RS_2025_01_05 2025-01-05 5880 5503 120 22914622 GCF_000281595.1 PRJNA224116 SAMN01057641 AKAG00000000.1 na 1128950 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH16 strain=KPNIH16 na latest Contig Major Full 2012-07-24 KPNIH16_1 NISC GCA_000281595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/595/GCF_000281595.1_KPNIH16_1/ na na na haploid bacteria 5715478 5715478 57.000000 0 178 178 NCBI RefSeq GCF_000281595.1-RS_2025_01_05 2025-01-05 5874 5512 119 22914622 GCF_000281635.1 PRJNA224116 SAMN01057657 AKAN00000000.1 na 1168064 573 Klebsiella pneumoniae subsp. pneumoniae KPNIH23 strain=KPNIH23 na latest Contig Major Full 2012-07-24 KPNIH23_1 NISC GCA_000281635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/635/GCF_000281635.1_KPNIH23_1/ na na na haploid bacteria 5740386 5740386 57.000000 0 338 338 NCBI RefSeq GCF_000281635.1-RS_2025_01_05 2025-01-05 5957 5478 112 22914622;27353756 GCF_000281655.1 PRJNA224116 SAMN00622035 ALDH00000000.1 na 991928 666 Vibrio cholerae CP1046(19) strain=CP1046(19) na latest Contig Major Full 2012-07-18 ASM28165v1 Institute for Genome Sciences GCA_000281655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/655/GCF_000281655.1_ASM28165v1/ na na na haploid bacteria 4093497 4093497 47.500000 0 25 25 NCBI RefSeq GCF_000281655.1-RS_2026_01_10 2026-01-10 3810 3611 120 na GCF_000281675.2 PRJNA224116 SAMN00996392 AKHM00000000.2 na 1191279 210 Helicobacter pylori FD423 strain=FD423 na latest Contig Major Full 2013-08-21 FD423 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000281675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/675/GCF_000281675.2_FD423/ na na na haploid bacteria 1623128 1623128 39.000000 0 115 115 NCBI RefSeq GCF_000281675.2-RS_2025_08_06 2025-08-06 1633 1441 46 23012278;24051312 GCF_000281695.1 PRJNA224116 SAMN02603638 na na 406552 406552 Natrinema sp. J7-2 strain=J7-2 na latest Complete Genome Major Full 2012-07-25 ASM28169v1 Nankai University GCA_000281695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/695/GCF_000281695.1_ASM28169v1/ na na na haploid archaea 3793615 3793615 64.000000 2 2 2 NCBI RefSeq GCF_000281695.1-RS_2024_10_21 2024-10-21 3824 3654 63 22911826 GCF_000281715.2 PRJNA224116 SAMN00839615 na na 1144307 1144307 Sphingobium sp. AP49 strain=AP49 na latest Complete Genome Major Full 2023-05-19 ASM28171v2 Oak Ridge National Lab GCA_000281715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/715/GCF_000281715.2_ASM28171v2/ na na na haploid bacteria 4506188 4506188 64.000000 1 1 1 NCBI RefSeq GCF_000281715.2-RS_2024_06_10 2024-06-10 4252 4151 69 23045501;34156297 GCF_000281735.1 PRJNA224116 SAMN00839614 AJVM00000000.1 na 1144306 1144306 Rhizobium sp. AP16 strain=AP16 na latest Contig Major Full 2012-07-25 ASM28173v1 Oak Ridge National Lab GCA_000281735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/735/GCF_000281735.1_ASM28173v1/ na na na haploid bacteria 6497619 6497619 60.000000 0 96 96 NCBI RefSeq GCF_000281735.1-RS_2024_12_17 2024-12-17 6196 6069 53 23045501 GCF_000281755.1 PRJNA224116 SAMN02470063 AJJI00000000.1 na 1162296 573 Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940 strain=DSM 30104 na latest Contig Major Full 2012-07-26 KlePneDSM30104 International Vaccine Institute GCA_000281755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/755/GCF_000281755.1_KlePneDSM30104/ na assembly from type material na haploid bacteria 5512347 5512347 57.000000 0 27 27 NCBI RefSeq GCF_000281755.1-RS_2025_01_05 2025-01-05 5397 5084 101 23012294 GCF_000281775.1 PRJNA224116 SAMN00016456 AFEX00000000.1 na 754081 562 Escherichia coli STEC_O31 strain=STEC_O31 na latest Contig Major Full 2012-07-26 ASM28177v1 Institute for Genome Sciences GCA_000281775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/775/GCF_000281775.1_ASM28177v1/ na na na haploid bacteria 5203079 5203079 51.000000 0 46 46 NCBI RefSeq GCF_000281775.1-RS_2025_06_13 2025-06-13 5126 4758 143 na GCF_000281895.1 PRJNA224116 SAMN02436465 AGBM00000000.1 na 1038922 294 Pseudomonas fluorescens Q2-87 strain=Q2-87 na latest Chromosome Major Full 2012-08-13 ASM28189v1 USDA - Agricultural Research Service, USA GCA_000281895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/895/GCF_000281895.1_ASM28189v1/ na na na haploid bacteria 6368168 6367968 60.500000 1 1 3 NCBI RefSeq GCF_000281895.1-RS_2025_05_22 2025-05-22 5749 5551 91 22792073 GCF_000281915.1 PRJNA224116 SAMN02436365 AHHJ00000000.1 na 1038921 587753 Pseudomonas chlororaphis subsp. aureofaciens 30-84 strain=30-84 na latest Chromosome Major Full 2012-08-13 ASM28191v1 USDA - Agricultural Research Service, USA GCA_000281915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/915/GCF_000281915.1_ASM28191v1/ na na na haploid bacteria 6666321 6665021 63.000000 1 1 14 NCBI RefSeq GCF_000281915.1-RS_2026_04_19 2026-04-19 6044 5868 97 22792073 GCF_000281955.1 PRJNA224116 SAMN00789123 AKKF00000000.1 na 1144304 1144304 Caulobacter sp. AP07 strain=AP07 na latest Contig Major Full 2012-07-27 Caulobacter.strAP07_v1.0 Oak Ridge National Lab GCA_000281955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/955/GCF_000281955.1_Caulobacter.strAP07_v1.0/ na na na haploid bacteria 5615958 5615958 69.000000 0 326 326 NCBI RefSeq GCF_000281955.1-RS_2024_08_13 2024-08-13 5313 5169 52 23045501 GCF_000281975.1 PRJNA224116 SAMN00789124 AKKE00000000.1 na 1144305 1144305 Novosphingobium sp. AP12 strain=AP12 na latest Contig Major Full 2012-07-27 Novosphingobium.strAP12_v1.0 Oak Ridge National Lab GCA_000281975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/281/975/GCF_000281975.1_Novosphingobium.strAP12_v1.0/ na na na haploid bacteria 5611617 5611617 66.000000 0 187 187 NCBI RefSeq GCF_000281975.1-RS_2024_08_13 2024-08-13 5298 5156 54 23045501 GCF_000282015.1 PRJNA224116 SAMN00839619 AKKB00000000.1 na 1144311 1144311 Brevibacillus sp. CF112 strain=CF112 na latest Contig Major Full 2012-07-27 Brevibacillus.strCF112_v1.0 Oak Ridge National Lab GCA_000282015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/015/GCF_000282015.1_Brevibacillus.strCF112_v1.0/ na na na haploid bacteria 5271824 5271824 54.000000 0 172 172 NCBI RefSeq GCF_000282015.1-RS_2024_08_13 2024-08-13 5268 5090 33 23045501 GCF_000282035.1 PRJNA224116 SAMN00839620 AKKA00000000.1 na 1144312 1144312 Rhizobium sp. CF122 strain=CF122 na latest Contig Major Full 2012-07-27 CF122.fsa Oak Ridge National Lab GCA_000282035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/035/GCF_000282035.1_CF122.fsa/ na na na haploid bacteria 6142299 6142299 60.000000 0 130 130 NCBI RefSeq GCF_000282035.1-RS_2025_08_27 2025-08-27 6037 5780 50 23045501 GCF_000282055.1 PRJNA224116 SAMN00839621 AKJZ00000000.1 na 1144313 1144313 Flavobacterium sp. CF136 strain=CF136 na latest Contig Major Full 2012-07-27 CF136.fsa Oak Ridge National Lab GCA_000282055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/055/GCF_000282055.1_CF136.fsa/ na na na haploid bacteria 5102016 5102016 33.500000 0 113 113 NCBI RefSeq GCF_000282055.1-RS_2024_08_13 2024-08-13 4293 4217 53 23045501 GCF_000282075.1 PRJNA224116 SAMN00839616 AKIX00000000.1 na 1144308 1144308 Brevibacillus sp. BC25 strain=BC25 na latest Contig Major Full 2012-07-27 Brevibacillus.strBC25_v1.0 Oak Ridge National Lab GCA_000282075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/075/GCF_000282075.1_Brevibacillus.strBC25_v1.0/ na na na haploid bacteria 6279079 6279079 47.000000 0 140 140 NCBI RefSeq GCF_000282075.1-RS_2024_08_13 2024-08-13 6004 5865 68 23045501 GCF_000282095.2 PRJNA224116 SAMN00839618 AKKC00000000.2 na 1144310 1144310 Rhizobium sp. CF080 strain=CF080 na latest Contig Major Full 2014-01-28 Rhizobium.strCF080_v2.0 Oak Ridge National Lab GCA_000282095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/095/GCF_000282095.2_Rhizobium.strCF080_v2.0/ na na na haploid bacteria 7049533 7049533 61.500000 0 16 16 NCBI RefSeq GCF_000282095.2-RS_2024_06_04 2024-06-04 6764 6595 64 na GCF_000282115.1 PRJNA224116 SAMN00839624 AKJY00000000.1 reference genome 1144316 1144316 Chryseobacterium populi strain=CF314 na latest Contig Major Full 2012-07-27 Chryseobacterium.strCF314_v1.0 Oak Ridge National Lab GCA_000282115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/115/GCF_000282115.1_Chryseobacterium.strCF314_v1.0/ na assembly from type material na haploid bacteria 4484672 4484672 36.500000 0 119 119 NCBI RefSeq GCF_000282115.1-RS_2025_11_21 2025-11-21 4132 4022 60 23045501 GCF_000282135.1 PRJNA224116 SAMN00839627 AKJW00000000.1 na 1144319 1144319 Herbaspirillum sp. CF444 strain=CF444 na latest Contig Major Full 2012-07-27 Herbaspirillum.strCF444_v1.0 Oak Ridge National Lab GCA_000282135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/135/GCF_000282135.1_Herbaspirillum.strCF444_v1.0/ na na na haploid bacteria 5594732 5594732 59.500000 0 125 125 NCBI RefSeq GCF_000282135.1-RS_2025_08_27 2025-08-27 5106 5002 59 23045501 GCF_000282155.1 PRJNA224116 SAMN00839630 AKJV00000000.1 na 1144322 1144322 Pseudomonas sp. GM16 strain=GM16 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM16_v1.0 Oak Ridge National Lab GCA_000282155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/155/GCF_000282155.1_Pseudomonas.strGM16_v1.0/ na na na haploid bacteria 6550518 6550518 59.000000 0 128 128 NCBI RefSeq GCF_000282155.1-RS_2025_08_27 2025-08-27 5897 5685 69 23045501 GCF_000282175.2 PRJNA224116 SAMN00839631 na na 1144323 1144323 Pseudomonas sp. GM17 strain=GM17 na latest Complete Genome Major Full 2023-06-01 ASM28217v2 Oak Ridge National Lab GCA_000282175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/175/GCF_000282175.2_ASM28217v2/ na na na haploid bacteria 6866808 6866808 63.000000 1 1 1 NCBI RefSeq GCF_000282175.2-RS_2024_06_17 2024-06-17 6159 5945 86 23045501;34156297 GCF_000282195.1 PRJNA224116 SAMN00839632 AKJT00000000.1 na 1144324 1144324 Pseudomonas sp. GM18 strain=GM18 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM18_v1.0 Oak Ridge National Lab GCA_000282195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/195/GCF_000282195.1_Pseudomonas.strGM18_v1.0/ na na na haploid bacteria 6297618 6297618 59.500000 0 140 140 NCBI RefSeq GCF_000282195.1-RS_2025_08_27 2025-08-27 5787 5628 70 23045501 GCF_000282215.1 PRJNA224116 SAMN00839633 AKJS00000000.1 na 1144325 1144325 Pseudomonas sp. GM21 strain=GM21 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM21_v1.0 Oak Ridge National Lab GCA_000282215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/215/GCF_000282215.1_Pseudomonas.strGM21_v1.0/ na na na haploid bacteria 6609272 6609272 58.500000 0 210 210 NCBI RefSeq GCF_000282215.1-RS_2025_08_27 2025-08-27 6108 5885 64 23045501 GCF_000282235.1 PRJNA224116 SAMN00839634 AKJR00000000.1 na 1144326 1144326 Pseudomonas sp. GM24 strain=GM24 na latest Scaffold Major Full 2012-07-27 Pseudomonas.strGM24_v1.0 Oak Ridge National Lab GCA_000282235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/235/GCF_000282235.1_Pseudomonas.strGM24_v1.0/ na na na haploid bacteria 6517063 6516020 59.000000 0 399 449 NCBI RefSeq GCF_000282235.1-RS_2025_08_27 2025-08-27 5890 5743 61 23045501 GCF_000282255.1 PRJNA224116 SAMN00839636 AKJQ00000000.1 na 1144327 1144327 Pseudomonas sp. GM25 strain=GM25 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM25_v1.0 Oak Ridge National Lab GCA_000282255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/255/GCF_000282255.1_Pseudomonas.strGM25_v1.0/ na na na haploid bacteria 6350607 6350607 61.000000 0 91 91 NCBI RefSeq GCF_000282255.1-RS_2025_08_27 2025-08-27 5781 5661 60 23045501 GCF_000282275.2 PRJNA224116 SAMN00839637 AKJP00000000.2 na 1144328 1144328 Pseudomonas sp. GM30 strain=GM30 na latest Contig Major Full 2014-01-28 Pseudomonas.strGM30_v2.0 Oak Ridge National Lab GCA_000282275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/275/GCF_000282275.2_Pseudomonas.strGM30_v2.0/ na na na haploid bacteria 6152442 6152442 60.500000 0 32 32 NCBI RefSeq GCF_000282275.2-RS_2025_08_27 2025-08-27 5621 5487 69 23045501 GCF_000282295.1 PRJNA224116 SAMN00839638 AKJO00000000.1 na 1144329 1144329 Pseudomonas sp. GM33 strain=GM33 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM33_v1.0 Oak Ridge National Lab GCA_000282295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/295/GCF_000282295.1_Pseudomonas.strGM33_v1.0/ na na na haploid bacteria 6727223 6727223 60.000000 0 205 205 NCBI RefSeq GCF_000282295.1-RS_2025_08_27 2025-08-27 6138 5951 58 23045501 GCF_000282315.2 PRJNA224116 SAMN00839639 AKJN00000000.2 na 1144708 1144708 Pseudomonas sp. GM41(2012) strain=GM41(2012) na latest Contig Major Full 2014-01-28 Pseudomonas.strGM41_v2.0 Oak Ridge National Lab GCA_000282315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/315/GCF_000282315.2_Pseudomonas.strGM41_v2.0/ na na na haploid bacteria 6685028 6685028 59.000000 0 13 13 NCBI RefSeq GCF_000282315.2-RS_2025_08_27 2025-08-27 6109 5925 88 23045501 GCF_000282335.1 PRJNA224116 SAMN00839640 AKJM00000000.1 na 1144330 1144330 Pseudomonas sp. GM48 strain=GM48 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM48_v1.0 Oak Ridge National Lab GCA_000282335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/335/GCF_000282335.1_Pseudomonas.strGM48_v1.0/ na na na haploid bacteria 6443787 6443787 59.500000 0 200 200 NCBI RefSeq GCF_000282335.1-RS_2025_08_27 2025-08-27 5930 5751 57 23045501 GCF_000282355.1 PRJNA224116 SAMN00839642 AKJL00000000.1 na 1144331 1144331 Pseudomonas sp. GM49 strain=GM49 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM49_v1.0 Oak Ridge National Lab GCA_000282355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/355/GCF_000282355.1_Pseudomonas.strGM49_v1.0/ na na na haploid bacteria 6589890 6589890 59.500000 0 345 345 NCBI RefSeq GCF_000282355.1-RS_2025_08_27 2025-08-27 6281 6008 65 23045501 GCF_000282375.1 PRJNA224116 SAMN00839643 AKJK00000000.1 na 1144332 1144332 Pseudomonas sp. GM50 strain=GM50 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM50_v1.0 Oak Ridge National Lab GCA_000282375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/375/GCF_000282375.1_Pseudomonas.strGM50_v1.0/ na na na haploid bacteria 6692143 6692143 59.000000 0 155 155 NCBI RefSeq GCF_000282375.1-RS_2025_08_27 2025-08-27 6125 5949 67 23045501 GCF_000282395.1 PRJNA224116 SAMN00839644 AKJJ00000000.1 na 1144333 1144333 Pseudomonas sp. GM55 strain=GM55 na latest Contig Major Full 2012-07-27 GM55.fsa Oak Ridge National Lab GCA_000282395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/395/GCF_000282395.1_GM55.fsa/ na na na haploid bacteria 6489331 6489331 59.500000 0 163 163 NCBI RefSeq GCF_000282395.1-RS_2025_08_27 2025-08-27 6005 5801 61 23045501 GCF_000282415.1 PRJNA224116 SAMN00839645 AKJI00000000.1 na 1144334 1144334 Pseudomonas sp. GM60 strain=GM60 na latest Contig Major Full 2012-07-27 GM60.fsa Oak Ridge National Lab GCA_000282415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/415/GCF_000282415.1_GM60.fsa/ na na na haploid bacteria 6424244 6424244 59.500000 0 181 181 NCBI RefSeq GCF_000282415.1-RS_2025_08_27 2025-08-27 5965 5810 65 23045501 GCF_000282435.1 PRJNA224116 SAMN00839646 AKJH00000000.1 na 1144335 1144335 Pseudomonas sp. GM67 strain=GM67 na latest Contig Major Full 2012-07-27 GM67.fsa Oak Ridge National Lab GCA_000282435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/435/GCF_000282435.1_GM67.fsa/ na na na haploid bacteria 6502113 6502113 59.500000 0 183 183 NCBI RefSeq GCF_000282435.1-RS_2025_08_25 2025-08-25 6029 5883 66 23045501 GCF_000282455.1 PRJNA224116 SAMN00839647 AKJG00000000.1 na 1144336 1144336 Pseudomonas sp. GM74 strain=GM74 na latest Contig Major Full 2012-07-27 GM74.fsa Oak Ridge National Lab GCA_000282455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/455/GCF_000282455.1_GM74.fsa/ na na na haploid bacteria 6104277 6104277 60.000000 0 180 180 NCBI RefSeq GCF_000282455.1-RS_2025_08_27 2025-08-27 5649 5467 64 23045501 GCF_000282475.1 PRJNA224116 SAMN00839648 AKJF00000000.1 na 1144337 1144337 Pseudomonas sp. GM78 strain=GM78 na latest Contig Major Full 2012-07-27 GM78.fsa Oak Ridge National Lab GCA_000282475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/475/GCF_000282475.1_GM78.fsa/ na na na haploid bacteria 7287561 7287561 60.000000 0 235 235 NCBI RefSeq GCF_000282475.1-RS_2025_08_27 2025-08-27 6773 6554 65 23045501 GCF_000282495.1 PRJNA224116 SAMN00839649 AKJE00000000.1 na 1144338 1144338 Pseudomonas sp. GM79 strain=GM79 na latest Contig Major Full 2012-07-27 GM79.fsa Oak Ridge National Lab GCA_000282495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/495/GCF_000282495.1_GM79.fsa/ na na na haploid bacteria 6707010 6707010 59.000000 0 126 126 NCBI RefSeq GCF_000282495.1-RS_2025_08_27 2025-08-27 6121 5938 66 23045501 GCF_000282515.1 PRJNA224116 SAMN00839650 AKJD00000000.1 na 1144339 1144339 Pseudomonas sp. GM80 strain=GM80 na latest Contig Major Full 2012-07-27 GM80.fsa Oak Ridge National Lab GCA_000282515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/515/GCF_000282515.1_GM80.fsa/ na na na haploid bacteria 6786162 6786162 59.000000 0 282 282 NCBI RefSeq GCF_000282515.1-RS_2025_08_27 2025-08-27 6266 6117 68 23045501 GCF_000282535.1 PRJNA224116 SAMN00839651 AKJC00000000.1 na 1144340 1144340 Pseudomonas sp. GM84 strain=GM84 na latest Contig Major Full 2012-07-27 GM84.fsa Oak Ridge National Lab GCA_000282535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/535/GCF_000282535.1_GM84.fsa/ na na na haploid bacteria 5818772 5818772 63.000000 0 384 384 NCBI RefSeq GCF_000282535.1-RS_2025_08_27 2025-08-27 5356 5201 59 23045501 GCF_000282555.1 PRJNA224116 SAMN00839629 AKJB00000000.1 na 1144321 1144321 Pseudomonas sp. GM102 strain=GM102 na latest Contig Major Full 2012-07-27 Pseudomonas.strGM102_v1.0 Oak Ridge National Lab GCA_000282555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/555/GCF_000282555.1_Pseudomonas.strGM102_v1.0/ na na na haploid bacteria 6657346 6657346 59.000000 0 159 159 NCBI RefSeq GCF_000282555.1-RS_2025_08_27 2025-08-27 6079 5896 68 23045501 GCF_000282575.1 PRJNA224116 SAMN00839653 AKJA00000000.1 na 1144342 1144342 Herbaspirillum sp. YR522 strain=YR522 na latest Contig Major Full 2012-07-27 Herbaspirillum.strYR522_v1.0 Oak Ridge National Lab GCA_000282575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/575/GCF_000282575.1_Herbaspirillum.strYR522_v1.0/ na na na haploid bacteria 5113042 5113042 64.000000 0 168 168 NCBI RefSeq GCF_000282575.1-RS_2024_08_13 2024-08-13 4682 4562 57 23045501 GCF_000282595.1 PRJNA224116 SAMN00839654 AKIZ00000000.1 na 1144343 1144343 Phyllobacterium sp. YR531 strain=YR531 na latest Contig Major Full 2012-07-27 Phyllobacterium.strYR531_v1.0 Oak Ridge National Lab GCA_000282595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/595/GCF_000282595.1_Phyllobacterium.strYR531_v1.0/ na na na haploid bacteria 4997302 4997302 53.000000 0 41 41 NCBI RefSeq GCF_000282595.1-RS_2024_06_01 2024-06-01 4829 4734 52 23045501 GCF_000282615.1 PRJNA224116 SAMN00839655 AKIY00000000.1 na 1144344 1144344 Bradyrhizobium sp. YR681 strain=YR681 na latest Contig Major Full 2012-07-27 Bradyrhizobium.strYR681_v1.0 Oak Ridge National Lab GCA_000282615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/615/GCF_000282615.1_Bradyrhizobium.strYR681_v1.0/ na na na haploid bacteria 7831714 7831714 64.500000 0 351 351 NCBI RefSeq GCF_000282615.1-RS_2024_06_14 2024-06-14 7632 7445 58 23045501 GCF_000282635.1 PRJNA224116 SAMN00839623 AKIW00000000.1 na 1144315 1144315 Variovorax sp. CF313 strain=CF313 na latest Scaffold Major Full 2012-07-27 Variovorax.strCF313_v1.0 Oak Ridge National Lab GCA_000282635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/635/GCF_000282635.1_Variovorax.strCF313_v1.0/ na na na haploid bacteria 6029174 6028901 67.000000 0 173 187 NCBI RefSeq GCF_000282635.1-RS_2025_08_27 2025-08-27 5713 5578 55 23045501 GCF_000282655.1 PRJNA224116 SAMN00839626 AKIV00000000.1 na 1144318 1144318 Polaromonas sp. CF318 strain=CF318 na latest Contig Major Full 2012-07-27 Polaromonas.strCF318_v1.0 Oak Ridge National Lab GCA_000282655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/655/GCF_000282655.1_Polaromonas.strCF318_v1.0/ na na na haploid bacteria 5008816 5008816 65.000000 0 159 159 NCBI RefSeq GCF_000282655.1-RS_2024_08_13 2024-08-13 4844 4744 59 23045501 GCF_000282675.1 PRJNA224116 SAMN00839628 AKIU00000000.1 na 1144320 1144320 Pantoea sp. GM01 strain=GM01 na latest Contig Major Full 2012-07-27 Pantoea.strGM01_v1.0 Oak Ridge National Lab GCA_000282675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/675/GCF_000282675.1_Pantoea.strGM01_v1.0/ na na na haploid bacteria 5320548 5320548 54.500000 0 102 102 NCBI RefSeq GCF_000282675.1-RS_2024_08_13 2024-08-13 4963 4846 74 23045501 GCF_000282695.2 PRJNA224116 SAMN00839652 AKIT00000000.2 na 1144341 1144341 Pantoea sp. YR343 strain=YR343 na latest Contig Major Full 2023-05-23 ASM28269v2 Oak Ridge National Lab GCA_000282695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/695/GCF_000282695.2_ASM28269v2/ na na na haploid bacteria 5391843 5391843 54.500000 0 3 3 NCBI RefSeq GCF_000282695.2-RS_2024_06_17 2024-06-17 4931 4784 106 23045501 GCF_000282715.1 PRJNA224116 SAMN02603408 na na 713604 33910 Amycolatopsis mediterranei S699 strain=S699 na latest Complete Genome Major Full 2012-07-30 ASM28271v1 Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences GCA_000282715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/715/GCF_000282715.1_ASM28271v1/ na na na haploid bacteria 10246920 10246920 71.500000 1 1 1 NCBI RefSeq GCF_000282715.1-RS_2026_03_28 2026-03-28 9675 9503 69 23012281 GCF_000282755.1 PRJNA224116 SAMN02469948 AKZL00000000.1 na 1201295 1201295 Shewanella sp. POL2 strain=POL2 na latest Contig Major Full 2012-07-30 ASM28275v1 Institute of Biochemistry and Biophysics PAS GCA_000282755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/755/GCF_000282755.1_ASM28275v1/ na na na haploid bacteria 4913945 4913945 46.000000 0 242 242 NCBI RefSeq GCF_000282755.1-RS_2024_05_12 2024-05-12 4450 4183 86 21464603 GCF_000282835.1 PRJNA224116 SAMN02469430 AKXS00000000.1 na 1204340 1204340 Pandoraea sp. B-6 strain=B-6 na latest Scaffold Major Full 2013-03-04 ASM28283v1 Central South university GCA_000282835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/835/GCF_000282835.1_ASM28283v1/ na na na haploid bacteria 5035498 5023165 63.500000 0 148 348 NCBI RefSeq GCF_000282835.1-RS_2024_08_13 2024-08-13 4782 4536 65 na GCF_000282875.1 PRJNA224116 SAMN02415239 AKZO00000000.1 na 1176488 28901 Salmonella enterica subsp. enterica serovar Typhi str. CR0044 strain=CR0044 na latest Contig Major Full 2012-07-30 SalTypSTCR0044 1.0 University of Malaya GCA_000282875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/875/GCF_000282875.1_SalTypSTCR0044_1.0/ na na na haploid bacteria 4696714 4696714 52.000000 0 201 201 NCBI RefSeq GCF_000282875.1-RS_2025_04_15 2025-04-15 4767 4312 82 23045488 GCF_000282895.1 PRJNA224116 SAMN02470959 ALBQ00000000.1 na 194867 194867 Sphingomonas sp. ATCC 31555 strain=ATCC 31555 na latest Contig Major Full 2012-07-30 ASM28289v1 State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000282895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/895/GCF_000282895.1_ASM28289v1/ na na na haploid bacteria 4046117 4046117 66.000000 0 62 62 NCBI RefSeq GCF_000282895.1-RS_2025_08_27 2025-08-27 3823 3725 53 23045500 GCF_000282915.1 PRJNA224116 SAMN02470548 ALBW00000000.1 na 1198629 287 Pseudomonas aeruginosa MRW44.1 strain=MRW44.1 na latest Contig Major Full 2012-07-30 MWR44.1-1.0 Michigan State University GCA_000282915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/915/GCF_000282915.1_MWR44.1-1.0/ na na na haploid bacteria 6266909 6266909 66.500000 0 54 54 NCBI RefSeq GCF_000282915.1-RS_2025_04_15 2025-04-15 5841 5679 70 22869726 GCF_000282935.1 PRJNA224116 SAMN00828786 ALCB00000000.1 na 1105029 1105029 Actinomyces sp. ICM39 strain=ICM39 na latest Contig Major Full 2012-07-30 AspICM39v1.0 J. Craig Venter Institute GCA_000282935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/935/GCF_000282935.1_AspICM39v1.0/ na na na haploid bacteria 2267656 2267656 65.500000 0 146 146 NCBI RefSeq GCF_000282935.1-RS_2024_07_01 2024-07-01 1987 1893 54 na GCF_000282955.1 PRJNA224116 SAMN02469872 ALJB00000000.1 na 1210443 316 Stutzerimonas stutzeri T13 strain=T13 na latest Contig Major Full 2012-07-30 ASM28295v1 Harbin Institute of Technology GCA_000282955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/955/GCF_000282955.1_ASM28295v1/ na na na haploid bacteria 4648939 4648939 64.000000 0 71 71 NCBI RefSeq GCF_000282955.1-RS_2026_03_28 2026-03-28 4485 4371 54 23012292 GCF_000282975.1 PRJNA224116 SAMN02469873 ALJC00000000.1 na 1211112 122355 Pseudomonas psychrophila HA-4 strain=HA-4 na latest Contig Major Full 2012-07-30 ASM28297v1 Harbin Institute of Technology GCA_000282975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/975/GCF_000282975.1_ASM28297v1/ na na na haploid bacteria 5235696 5235696 56.500000 0 145 145 NCBI RefSeq GCF_000282975.1-RS_2025_04_15 2025-04-15 4836 4664 57 23012293 GCF_000282995.1 PRJNA224116 SAMN02470048 ALEE00000000.1 na 1165852 1165852 Melaminivora alkalimesophila strain=CY1 na latest Contig Major Full 2012-07-30 CRZ1 Institute of Urban Environment, Chinese Academy of Sciences GCA_000282995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/282/995/GCF_000282995.1_CRZ1/ na assembly from type material na haploid bacteria 3007775 3007775 69.500000 0 836 836 NCBI RefSeq GCF_000282995.1-RS_2026_03_31 2026-03-31 3325 3022 51 24591424 GCF_000283015.1 PRJNA224116 SAMN02470927 ALIH00000000.1 na 1178825 1178825 Algibacter luteus strain=P7-3-5 na latest Contig Major Full 2012-07-30 P735.v1.0 Shandong University GCA_000283015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/015/GCF_000283015.1_P735.v1.0/ na assembly from type material na haploid bacteria 3384849 3384849 33.500000 0 51 51 NCBI RefSeq GCF_000283015.1-RS_2026_06_10 2026-06-10 3020 2963 42 23144387 GCF_000283035.1 PRJNA224116 SAMN00828781 ALIY00000000.1 na 1105030 1105030 Actinomyces sp. ICM58 strain=ICM58 na latest Contig Major Full 2012-07-30 AspICM58v1.0 J. Craig Venter Institute GCA_000283035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/035/GCF_000283035.1_AspICM58v1.0/ na na na haploid bacteria 2390495 2390495 66.500000 0 239 239 NCBI RefSeq GCF_000283035.1-RS_2025_08_27 2025-08-27 2134 2009 56 na GCF_000283055.1 PRJNA224116 SAMN02470947 ALIO00000000.1 na 1211113 287 Pseudomonas aeruginosa DQ8 strain=DQ8 na latest Contig Major Full 2012-07-30 DQ8 Shanghai Jiao Tong University GCA_000283055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/055/GCF_000283055.1_DQ8/ na na na haploid bacteria 6776640 6776640 66.000000 0 376 376 NCBI RefSeq GCF_000283055.1-RS_2025_04_15 2025-04-15 6696 6302 62 23105052 GCF_000283075.1 PRJNA224116 SAMN02470942 ALIP00000000.1 na 1211114 1211114 Pseudoxanthomonas sp. GW2 strain=GW2 na latest Contig Major Full 2012-07-30 GW2 Shanghai Jiao Tong University GCA_000283075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/075/GCF_000283075.1_GW2/ na na na haploid bacteria 3349425 3349425 71.500000 0 167 167 NCBI RefSeq GCF_000283075.1-RS_2024_12_01 2024-12-01 3184 3051 56 na GCF_000283095.1 PRJNA224116 SAMN02470948 ALIQ00000000.1 na 1211115 1211115 Chelatococcus sp. GW1 strain=GW1 na latest Contig Major Full 2012-07-30 GW1 Shanghai Jiao Tong University GCA_000283095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/095/GCF_000283095.1_GW1/ na na na haploid bacteria 5207049 5207049 68.500000 0 247 247 NCBI RefSeq GCF_000283095.1-RS_2024_08_22 2024-08-22 5033 4894 53 na GCF_000283115.1 PRJNA224116 SAMN02471360 AKFP00000000.1 na 1185325 1610 Loigolactobacillus coryniformis subsp. coryniformis CECT 5711 strain=CECT 5711 na latest Contig Major Full 2012-07-30 ASM28311v1 Era7 Bioinformatics GCA_000283115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/115/GCF_000283115.1_ASM28311v1/ na na na haploid bacteria 2842941 2842941 43.000000 0 203 203 NCBI RefSeq GCF_000283115.1-RS_2025_12_04 2025-12-04 2898 2723 60 na GCF_000283135.1 PRJNA224116 SAMN02471361 AKFQ00000000.1 na 1185324 1596 Lactobacillus gasseri CECT 5714 strain=CECT 5714 na latest Contig Major Full 2012-07-30 ASM28313v1 Era7 Bioinformatics GCA_000283135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/135/GCF_000283135.1_ASM28313v1/ na na na haploid bacteria 1907790 1907790 35.000000 0 85 85 NCBI RefSeq GCF_000283135.1-RS_2026_02_17 2026-02-17 1944 1778 56 na GCF_000283215.1 PRJNA224116 SAMN02471608 AKFN00000000.1 na 1151115 197 Campylobacter jejuni subsp. jejuni P854 strain=P854 na latest Scaffold Major Full 2012-08-06 ASM28321v1 University of Birmingham GCA_000283215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/215/GCF_000283215.1_ASM28321v1/ na na na haploid bacteria 1747266 1744857 30.000000 0 146 185 NCBI RefSeq GCF_000283215.1-RS_2026_06_27 2026-06-27 1961 1785 42 na GCF_000283235.1 PRJNA224116 SAMN02469457 AJTV00000000.1 na 1134912 134 Methylocystis parvus OBBP strain=OBBP na latest Contig Major Full 2012-07-31 MetPar_1.0 CIB-CSIC GCA_000283235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/235/GCF_000283235.1_MetPar_1.0/ na assembly from type material na haploid bacteria 4475912 4475912 63.500000 0 108 108 NCBI RefSeq GCF_000283235.1-RS_2026_04_23 2026-04-23 4408 4264 54 23012286 GCF_000283275.1 PRJNA224116 SAMN02603049 na na 490759 490759 Marinobacter sp. BSs20148 strain=BSs20148 na latest Complete Genome Major Full 2012-08-02 ASM28327v1 Marinobacter sp. BSs20148 GCA_000283275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/275/GCF_000283275.1_ASM28327v1/ na na na haploid bacteria 4063864 4063864 54.000000 1 1 1 NCBI RefSeq GCF_000283275.1-RS_2025_01_31 2025-01-31 3795 3650 62 23682144 GCF_000283295.1 PRJNA224116 SAMN02603392 na na 246196 1772 Mycolicibacterium smegmatis MC2 155 strain=MC2 155 na latest Complete Genome Major Full 2012-08-03 ASM28329v1 Institute of Genetics and Molecular and Cellular Biology GCA_000283295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/295/GCF_000283295.1_ASM28329v1/ na na na haploid bacteria 6988208 6988208 67.500000 1 1 1 NCBI RefSeq GCF_000283295.1-RS_2026_03_20 2026-03-20 6729 6538 56 16381882;17295914;18955433 GCF_000283315.1 PRJNA224116 SAMN02471152 ALKF00000000.1 na 1196323 1196323 Paenibacillus sp. OSY-SE strain=OSY-SE na latest Contig Major Full 2012-08-03 PaeOsy1.0 The Ohio State University GCA_000283315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/315/GCF_000283315.1_PaeOsy1.0/ na na na haploid bacteria 6931767 6931767 48.500000 0 205 205 NCBI RefSeq GCF_000283315.1-RS_2025_08_27 2025-08-27 6325 6088 36 23105053 GCF_000283335.1 PRJNA224116 SAMN02470186 ALJD00000000.1 na 1210908 553466 Halogranum salarium B-1 strain=B-1 na latest Contig Major Full 2012-08-03 162.HSB1.1 Korea Research Institute of Bioscience and Biotechnology GCA_000283335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/335/GCF_000283335.1_162.HSB1.1/ na assembly from heterotypic synonym type material na haploid archaea 4492306 4492306 62.000000 0 17 17 NCBI RefSeq GCF_000283335.1-RS_2025_11_24 2025-11-24 4582 4453 72 23144405 GCF_000283375.1 PRJNA224116 SAMN02472055 ALIJ00000000.1 na 1188007 504 Kingella kingae 11220434 strain=11220434 na latest Scaffold Major Full 2012-08-15 ASM28337v1 Université Aix-Marseille GCA_000283375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/375/GCF_000283375.1_ASM28337v1/ na na na haploid bacteria 2016589 1954266 46.500000 0 65 159 NCBI RefSeq GCF_000283375.1-RS_2026_03_20 2026-03-20 2101 1965 57 23045489 GCF_000283455.1 PRJNA224116 SAMN01090251 ALIS00000000.1 na 1212766 573 Klebsiella pneumoniae subsp. pneumoniae ST258-490 strain=ST258-490 na latest Contig Major Full 2012-08-07 KlebKpneumoniae_ST258_1.0 Tel Aviv Sourasky Medical center GCA_000283455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/455/GCF_000283455.1_KlebKpneumoniae_ST258_1.0/ na na na haploid bacteria 5707592 5707592 57.000000 0 569 569 NCBI RefSeq GCF_000283455.1-RS_2025_08_12 2025-08-12 5929 5688 39 23045514 GCF_000283475.1 PRJNA224116 SAMEA2272112 na na 859657 305 Ralstonia solanacearum PSI07 strain=PSI07 na latest Complete Genome Major Full 2010-06-22 ASM28347v1 CEA-Genoscope GCA_000283475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/475/GCF_000283475.1_ASM28347v1/ na na na haploid bacteria 5605618 5605618 66.500000 2 2 2 NCBI RefSeq GCF_000283475.1-RS_2025_03_11 2025-03-11 4952 4765 68 20550686 GCF_000283495.2 PRJNA224116 SAMEA2272734 na na 1064535 907 Megasphaera elsdenii DSM 20460 strain=DSM 20460 na latest Chromosome Major Full 2011-07-26 ASM28349v2 University of Natural Resources and Life Sciences GCA_000283495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/495/GCF_000283495.2_ASM28349v2/ na assembly from type material na haploid bacteria 2474718 2464883 53.000000 1 1 12 NCBI RefSeq GCF_000283495.2-RS_2025_12_13 2025-12-13 2334 2232 90 21914887 GCF_000283515.1 PRJNA224116 SAMD00061118 na na 627192 627192 Sphingobium sp. SYK-6 strain=SYK-6 na latest Complete Genome Major Full 2011-08-31 ASM28351v1 National Institute of Technology and Evaluation GCA_000283515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/515/GCF_000283515.1_ASM28351v1/ na na na haploid bacteria 4348133 4348133 65.500000 2 2 2 NCBI RefSeq GCF_000283515.1-RS_2025_08_25 2025-08-25 4117 4013 58 22207743 GCF_000283535.1 PRJNA224116 SAMD00060996 na na 748280 748280 Pseudogulbenkiania sp. NH8B strain=NH8B na latest Complete Genome Major Full 2011-09-07 ASM28353v1 Department of Applied Biological Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo GCA_000283535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/535/GCF_000283535.1_ASM28353v1/ na na na haploid bacteria 4332995 4332995 64.500000 1 1 1 NCBI RefSeq GCF_000283535.1-RS_2024_08_13 2024-08-13 4112 3979 120 22038961 GCF_000283555.1 PRJNA224116 SAMD00016607 na na 1041504 1041504 Candidatus Arthromitus sp. SFB-rat-Yit strain=SFB-rat-Yit na latest Complete Genome Major Full 2011-09-15 ASM28355v1 Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo GCA_000283555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/555/GCF_000283555.1_ASM28355v1/ na na na haploid bacteria 1515556 1515556 28.000000 1 1 1 NCBI RefSeq GCF_000283555.1-RS_2025_08_03 2025-08-03 1460 1389 58 21925114 GCF_000283595.1 PRJNA224116 SAMD00060967 na reference genome 652620 35790 Rickettsia japonica YH strain=YH na latest Complete Genome Major Full 2011-09-30 ASM28359v1 Yamaguchi University GCA_000283595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/595/GCF_000283595.1_ASM28359v1/ na assembly from type material na haploid bacteria 1283087 1283087 32.500000 1 1 1 NCBI RefSeq GCF_000283595.1-RS_2026_01_08 2026-01-08 1484 1292 40 24039725 GCF_000283615.1 PRJNA224116 SAMD00061109 na na 945021 51669 Tetragenococcus halophilus NBRC 12172 strain=NBRC 12172 na latest Complete Genome Major Full 2011-09-30 ASM28361v1 National Institute of Technology and Evaluation GCA_000283615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/615/GCF_000283615.1_ASM28361v1/ na na na haploid bacteria 2562720 2562720 36.000000 1 1 1 NCBI RefSeq GCF_000283615.1-RS_2026_02_10 2026-02-10 2571 2416 81 na GCF_000283635.1 PRJNA224116 SAMEA2272145 na na 1116231 59310 Streptococcus macedonicus ACA-DC 198 strain=ACA-DC 198 na latest Complete Genome Major Full 2012-01-16 ASM28363v1 Agricultural University of Athens, Greece GCA_000283635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/635/GCF_000283635.1_ASM28363v1/ na na na haploid bacteria 2142762 2142762 37.500000 2 2 2 NCBI RefSeq GCF_000283635.1-RS_2025_11_17 2025-11-17 2190 1900 92 22408241;24713045;25584532 GCF_000283655.1 PRJNA224116 SAMEA2272642 na na 862719 193 Azospirillum lipoferum 4B strain=4B na latest Complete Genome Major Full 2011-11-16 ASM28365v1 Laboratoire d'Ecologie Microbienne UMR-CNRS 5557 GCA_000283655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/655/GCF_000283655.1_ASM28365v1/ na na na haploid bacteria 6846400 6846400 67.500000 7 7 7 NCBI RefSeq GCF_000283655.1-RS_2025_05_21 2025-05-21 6147 5977 106 22216014 GCF_000283695.1 PRJNA224116 SAMEA2272738 na na 1114958 492670 Bacillus velezensis CAU B946 strain=CAU B946 na latest Complete Genome Major Full 2012-01-09 ASM28369v1 Center for Biotechnology, Bielefeld University GCA_000283695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/695/GCF_000283695.1_ASM28369v1/ na na na haploid bacteria 4019861 4019861 46.500000 1 1 1 NCBI RefSeq GCF_000283695.1-RS_2026_02_16 2026-02-16 4038 3803 130 22408246 GCF_000283715.1 PRJNA224116 SAMEA2272161 na na 216599 624 Shigella sonnei 53G strain=53G na latest Complete Genome Major Full 2012-01-31 ASM28371v1 Wellcome Trust Sanger Insititute GCA_000283715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/715/GCF_000283715.1_ASM28371v1/ na na na haploid bacteria 5220473 5220473 50.500000 5 5 5 NCBI RefSeq GCF_000283715.1-RS_2026_07_02 2026-07-02 5378 4559 130 22863732 GCF_000283755.1 PRJNA224116 SAMD00012611 na na 1112856 2104 Mycoplasmoides pneumoniae 309 strain=309 na latest Complete Genome Major Full 2011-11-30 ASM28375v1 National Institute of Infectious Diseases GCA_000283755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/755/GCF_000283755.1_ASM28375v1/ na na na haploid bacteria 817176 817176 40.000000 1 1 1 NCBI RefSeq GCF_000283755.1-RS_2026_02_28 2026-02-28 769 675 42 22328753 GCF_000283775.1 PRJNA224116 SAMN02603550 na na 1105102 783 Rickettsia rickettsii str. Colombia strain=Colombia na latest Complete Genome Major Full 2012-02-17 ASM28377v1 Los Alamos National Laboratory GCA_000283775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/775/GCF_000283775.1_ASM28377v1/ na na na haploid bacteria 1270083 1270083 32.500000 1 1 1 NCBI RefSeq GCF_000283775.1-RS_2026_01_08 2026-01-08 1457 1317 41 na GCF_000283795.1 PRJNA224116 SAMN02603553 na na 1105105 783 Rickettsia rickettsii str. Arizona strain=Arizona na latest Complete Genome Major Full 2012-02-17 ASM28379v1 Los Alamos National Laboratory GCA_000283795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/795/GCF_000283795.1_ASM28379v1/ na na na haploid bacteria 1267197 1267197 32.500000 1 1 1 NCBI RefSeq GCF_000283795.1-RS_2026_01_08 2026-01-08 1458 1322 41 na GCF_000283815.1 PRJNA224116 SAMN02603548 na na 1105100 783 Rickettsia rickettsii str. Hino strain=Hino na latest Complete Genome Major Full 2012-02-17 ASM28381v1 Los Alamos National Laboratory GCA_000283815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/815/GCF_000283815.1_ASM28381v1/ na na na haploid bacteria 1269837 1269837 32.500000 1 1 1 NCBI RefSeq GCF_000283815.1-RS_2026_01_08 2026-01-08 1459 1323 41 na GCF_000283835.1 PRJNA224116 SAMN02603551 na na 1105103 783 Rickettsia rickettsii str. Hauke strain=Hauke na latest Chromosome Major Full 2012-02-17 ASM28383v1 Los Alamos National Laboratory GCA_000283835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/835/GCF_000283835.1_ASM28383v1/ na na na haploid bacteria 1269774 1269721 32.500000 1 1 2 NCBI RefSeq GCF_000283835.1-RS_2026_01_08 2026-01-08 1458 1323 41 na GCF_000283855.1 PRJNA224116 SAMN02603559 na na 1105112 35791 Rickettsia massiliae str. AZT80 strain=AZT80 na latest Chromosome Major Full 2012-02-17 ASM28385v1 Los Alamos National Laboratory GCA_000283855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/855/GCF_000283855.1_ASM28385v1/ na na na haploid bacteria 1278719 1278659 32.500000 2 2 3 NCBI RefSeq GCF_000283855.1-RS_2025_01_08 2025-01-08 1461 1247 39 na GCF_000283875.1 PRJNA224116 SAMEA2272583 na na 1123863 553 Pantoea ananatis LMG 5342 strain=LMG 5342 na latest Complete Genome Major Full 2011-12-21 ASM28387v1 Center for Biotechnology GCA_000283875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/875/GCF_000283875.1_ASM28387v1/ na na na haploid bacteria 4908144 4908144 53.500000 2 2 2 NCBI RefSeq GCF_000283875.1-RS_2026_02_10 2026-02-10 4586 4384 112 22374951 GCF_000283895.2 PRJNA224116 SAMEA2272089 na na 1117943 380 Sinorhizobium fredii HH103 strain=HH103 na latest Complete Genome Minor Full 2011-12-21 ASM28389v2 Center for Biotechnology, Bielefeld University, Germany GCA_000283895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/895/GCF_000283895.2_ASM28389v2/ na na na haploid bacteria 6631846 6631846 62.500000 5 5 5 NCBI RefSeq GCF_000283895.2-RS_2026_04_16 2026-04-16 6303 6051 66 22374952 GCF_000283915.1 PRJNA224116 SAMN02603555 na reference genome 1105107 788 Rickettsia canadensis str. CA410 strain=CA410 na latest Complete Genome Major Full 2012-02-17 ASM28391v1 Los Alamos National Laboratory GCA_000283915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/915/GCF_000283915.1_ASM28391v1/ na na na haploid bacteria 1150228 1150228 31.000000 1 1 1 NCBI RefSeq GCF_000283915.1-RS_2026_01_08 2026-01-08 1069 916 40 na GCF_000283935.1 PRJNA224116 SAMN02603549 na na 1105101 783 Rickettsia rickettsii str. Hlp#2 strain=Hlp#2 na latest Complete Genome Major Full 2012-02-17 ASM28393v1 Los Alamos National Laboratory GCA_000283935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/935/GCF_000283935.1_ASM28393v1/ na na na haploid bacteria 1270751 1270751 32.500000 1 1 1 NCBI RefSeq GCF_000283935.1-RS_2026_01_08 2026-01-08 1454 1308 41 na GCF_000283955.1 PRJNA224116 SAMN02603552 na na 1105104 783 Rickettsia rickettsii str. Brazil strain=Brazil na latest Complete Genome Major Full 2012-02-17 ASM28395v1 Los Alamos National Laboratory GCA_000283955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/955/GCF_000283955.1_ASM28395v1/ na na na haploid bacteria 1255681 1255681 32.500000 1 1 1 NCBI RefSeq GCF_000283955.1-RS_2026_01_08 2026-01-08 1436 1302 41 na GCF_000283995.1 PRJNA224116 SAMN02603554 na na 481009 1105106 Rickettsia philipii str. 364D strain=364D na latest Complete Genome Major Full 2012-02-17 ASM28399v1 Los Alamos National Laboratory GCA_000283995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/283/995/GCF_000283995.1_ASM28399v1/ na na na haploid bacteria 1287740 1287740 32.500000 1 1 1 NCBI RefSeq GCF_000283995.1-RS_2025_01_08 2025-01-08 1462 1325 40 na GCF_000284015.1 PRJNA224116 SAMEA2272314 na na 1146883 138336 Blastococcus saxobsidens DD2 strain=DD2 na latest Complete Genome Major Full 2012-02-28 ASM28401v1 CEA-IG-Genoscope GCA_000284015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/015/GCF_000284015.1_ASM28401v1/ na na na haploid bacteria 4875340 4875340 73.000000 1 1 1 NCBI RefSeq GCF_000284015.1-RS_2025_03_15 2025-03-15 4710 4584 60 22535935 GCF_000284035.1 PRJNA224116 SAMEA2272802 na na 1127134 135487 Nocardia cyriacigeorgica GUH-2 strain=GUH-2 na latest Complete Genome Major Full 2012-02-07 ASM28403v1 CEA/DSV/IG/Genoscope GCA_000284035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/035/GCF_000284035.1_ASM28403v1/ na na na haploid bacteria 6194645 6194645 68.500000 1 1 1 NCBI RefSeq GCF_000284035.1-RS_2025_03_13 2025-03-13 5637 5536 61 22461543 GCF_000284055.1 PRJNA224116 SAMN02603561 na na 1105111 33989 Rickettsia amblyommatis str. GAT-30V strain=GAT-30V na latest Complete Genome Major Full 2012-03-01 ASM28405v1 Los Alamos National Laboratory GCA_000284055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/055/GCF_000284055.1_ASM28405v1/ na na na haploid bacteria 1480884 1480884 32.500000 4 4 4 NCBI RefSeq GCF_000284055.1-RS_2025_01_08 2025-01-08 1687 1421 40 27638476 GCF_000284075.1 PRJNA224116 SAMN02603560 na reference genome 1105113 33992 Rickettsia rhipicephali str. 3-7-female6-CWPP strain=3-7-female6-CWPP na latest Complete Genome Major Full 2012-03-01 ASM28407v1 Los Alamos National Laboratory GCA_000284075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/075/GCF_000284075.1_ASM28407v1/ na assembly from type material na haploid bacteria 1305467 1305467 32.500000 2 2 2 NCBI RefSeq GCF_000284075.1-RS_2026_01_08 2026-01-08 1499 1271 40 na GCF_000284095.1 PRJNA224116 SAMD00061115 na reference genome 927704 114197 Selenomonas ruminantium subsp. lactilytica TAM6421 strain=TAM6421 na latest Complete Genome Major Full 2012-03-28 ASM28409v1 National Institute of Technology and Evaluation GCA_000284095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/095/GCF_000284095.1_ASM28409v1/ na na na haploid bacteria 3631933 3631933 50.000000 10 10 10 NCBI RefSeq GCF_000284095.1-RS_2026_05_31 2026-05-31 3555 3415 97 na GCF_000284115.1 PRJNA224116 SAMD00061032 na reference genome 1142394 547188 Phycisphaera mikurensis NBRC 102666 strain=NBRC 102666 na latest Complete Genome Major Full 2012-03-28 ASM28411v1 National Institute of Technology and Evaluation GCA_000284115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/115/GCF_000284115.1_ASM28411v1/ na assembly from type material na haploid bacteria 3884382 3884382 73.000000 2 2 2 NCBI RefSeq GCF_000284115.1-RS_2025_11_20 2025-11-20 3163 3097 52 na GCF_000284135.1 PRJNA224116 SAMD00061000 na na 1080228 1148 Synechocystis sp. PCC 6803 substr. GT-I strain=PCC 6803 substr. GT-I na latest Complete Genome Major Full 2011-12-01 ASM28413v1 University of Tokyo , Department of Agriculture, GCA_000284135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/135/GCF_000284135.1_ASM28413v1/ na na na haploid bacteria 3570004 3570004 47.500000 1 1 1 NCBI RefSeq GCF_000284135.1-RS_2024_08_13 2024-08-13 3349 3245 51 22193367 GCF_000284155.1 PRJNA224116 SAMN02603558 na reference genome 1105110 787 Rickettsia australis str. Cutlack strain=Cutlack na latest Complete Genome Major Full 2012-03-01 ASM28415v1 Los Alamos National Laboratory GCA_000284155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/155/GCF_000284155.1_ASM28415v1/ na na na haploid bacteria 1323280 1323280 32.500000 2 2 2 NCBI RefSeq GCF_000284155.1-RS_2026_01_08 2026-01-08 1447 1273 40 na GCF_000284175.1 PRJNA224116 SAMN02603562 na na 1105114 33991 Rickettsia montanensis str. OSU 85-930 strain=OSU 85-930 na latest Complete Genome Major Full 2012-03-01 ASM28417v1 Los Alamos National Laboratory GCA_000284175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/175/GCF_000284175.1_ASM28417v1/ na na na haploid bacteria 1279798 1279798 32.500000 1 1 1 NCBI RefSeq GCF_000284175.1-RS_2025_01_08 2025-01-08 1454 1286 40 na GCF_000284195.1 PRJNA224116 SAMN02603556 na na 1105108 35792 Rickettsia parkeri str. Portsmouth strain=Portsmouth na latest Complete Genome Major Full 2012-03-01 ASM28419v1 Los Alamos National Laboratory GCA_000284195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/195/GCF_000284195.1_ASM28419v1/ na na na haploid bacteria 1300386 1300386 32.500000 1 1 1 NCBI RefSeq GCF_000284195.1-RS_2025_01_08 2025-01-08 1494 1350 40 na GCF_000284215.1 PRJNA224116 SAMD00061001 na na 1080229 1148 Synechocystis sp. PCC 6803 substr. PCC-N strain=PCC 6803 substr. PCC-N na latest Complete Genome Major Full 2011-12-01 ASM28421v1 University of Tokyo, Department of Agriculture GCA_000284215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/215/GCF_000284215.1_ASM28421v1/ na na na haploid bacteria 3570103 3570103 47.500000 1 1 1 NCBI RefSeq GCF_000284215.1-RS_2024_08_13 2024-08-13 3350 3246 51 22193367 GCF_000284235.1 PRJNA224116 SAMD00060981 na na 944547 944547 Arcobacter sp. L strain=L na latest Complete Genome Major Full 2011-09-02 ASM28423v1 Center for Computational and Quantitative Life Science, RIKEN GCA_000284235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/235/GCF_000284235.1_ASM28423v1/ na na na haploid bacteria 2947662 2947662 26.500000 2 2 2 NCBI RefSeq GCF_000284235.1-RS_2024_08_23 2024-08-23 2944 2862 73 22038970 GCF_000284255.1 PRJNA224116 SAMD00061116 na na 983917 28068 Rubrivivax gelatinosus IL144 strain=IL144 na latest Complete Genome Major Full 2012-03-28 ASM28425v1 National Institute of Technology and Evaluation GCA_000284255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/255/GCF_000284255.1_ASM28425v1/ na na na haploid bacteria 5043253 5043253 71.000000 1 1 1 NCBI RefSeq GCF_000284255.1-RS_2025_12_05 2025-12-05 4703 4609 62 22689232 GCF_000284275.1 PRJNA224116 SAMD00060998 na reference genome 1404864 1404864 Bradyrhizobium cosmicum strain=S23321 na latest Complete Genome Major Full 2012-03-28 ASM28427v1 National Institute of Genetics GCA_000284275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/275/GCF_000284275.1_ASM28427v1/ na na na haploid bacteria 7231841 7231841 64.500000 1 1 1 NCBI RefSeq GCF_000284275.1-RS_2026_05_26 2026-05-26 6893 6807 54 22452844 GCF_000284295.1 PRJNA224116 SAMD00060941 na reference genome 512565 1866 Actinoplanes missouriensis 431 strain=431 na latest Complete Genome Major Full 2012-03-28 ASM28429v1 National Institute of Technology and Evaluation GCA_000284295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/295/GCF_000284295.1_ASM28429v1/ na assembly from type material na haploid bacteria 8773466 8773466 71.000000 1 1 1 NCBI RefSeq GCF_000284295.1-RS_2025_12_11 2025-12-11 8180 8026 80 na GCF_000284315.1 PRJNA224116 SAMD00061058 na reference genome 1162668 180 Leptospirillum ferrooxidans C2-3 strain=C2-3 na latest Complete Genome Major Full 2012-03-30 ASM28431v1 Ibaraki University, college of agriculture GCA_000284315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/315/GCF_000284315.1_ASM28431v1/ na na na haploid bacteria 2559538 2559538 50.000000 1 1 1 NCBI RefSeq GCF_000284315.1-RS_2025_12_02 2025-12-02 2495 2390 64 22815442 GCF_000284335.1 PRJNA224116 SAMD00061110 na reference genome 511051 693075 Caldisericum exile AZM16c01 strain=AZM16c01 na latest Complete Genome Major Full 2012-03-28 ASM28433v1 National Institute of Technology and Evaluation GCA_000284335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/335/GCF_000284335.1_ASM28433v1/ na assembly from type material na haploid bacteria 1558103 1558103 35.500000 1 1 1 NCBI RefSeq GCF_000284335.1-RS_2025_12_11 2025-12-11 1574 1515 52 na GCF_000284355.1 PRJNA224116 SAMD00060980 na na 944546 28197 Aliarcobacter butzleri ED-1 strain=ED-1 na latest Complete Genome Major Full 2011-09-02 ASM28435v1 Center for Computational and Quantitative Life Science, RIKEN GCA_000284355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/355/GCF_000284355.1_ASM28435v1/ na na na haploid bacteria 2256675 2256675 27.000000 1 1 1 NCBI RefSeq GCF_000284355.1-RS_2026_03_31 2026-03-31 2244 2161 72 22038970 GCF_000284375.1 PRJNA224116 SAMD00060992 na na 1037409 375 Bradyrhizobium japonicum USDA 6 strain=USDA 6 na latest Complete Genome Major Full 2011-10-31 ASM28437v1 Kyoto Sangyo University GCA_000284375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/375/GCF_000284375.1_ASM28437v1/ na assembly from type material na haploid bacteria 9207384 9207384 63.500000 1 1 1 NCBI RefSeq GCF_000284375.1-RS_2025_08_17 2025-08-17 8784 8444 66 24710291 GCF_000284395.1 PRJNA224116 SAMEA2272044 na na 1155777 492670 Bacillus velezensis YAU B9601-Y2 strain=YAU B9601-Y2 na latest Complete Genome Major Full 2012-03-15 ASM28439v1 Center for Biotechnology, Bielefeld University GCA_000284395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/395/GCF_000284395.1_ASM28439v1/ na na na haploid bacteria 4242774 4242774 46.000000 1 1 1 NCBI RefSeq GCF_000284395.1-RS_2026_02_10 2026-02-10 4264 4044 126 22628498 GCF_000284415.1 PRJNA224116 SAMEA2272054 na reference genome 1150469 1084 Pararhodospirillum photometricum DSM 122 strain=DSM 122 na latest Complete Genome Major Full 2012-02-23 ASM28441v2 CNRS GCA_000284415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/415/GCF_000284415.1_ASM28441v2/ na assembly from type material na haploid bacteria 3876289 3876289 64.500000 1 1 1 NCBI RefSeq GCF_000284415.1-RS_2026_04_06 2026-04-06 3675 3392 112 na GCF_000284435.1 PRJNA224116 SAMD00016606 na na 1041809 49118 Candidatus Arthromitus sp. SFB-mouse-Yit strain=SFB-mouse-Yit na latest Complete Genome Major Full 2011-09-15 ASM28443v1 Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo GCA_000284435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/435/GCF_000284435.1_ASM28443v1/ na na na haploid bacteria 1586397 1586397 28.000000 1 1 1 NCBI RefSeq GCF_000284435.1-RS_2025_08_03 2025-08-03 1556 1486 57 21925114 GCF_000284455.1 PRJNA224116 SAMD00060999 na na 1080230 1148 Synechocystis sp. PCC 6803 substr. PCC-P strain=PCC 6803 substr. PCC-P na latest Complete Genome Major Full 2011-12-01 ASM28445v1 University of Tokyo, Department of Agriculture GCA_000284455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/455/GCF_000284455.1_ASM28445v1/ na na na haploid bacteria 3570114 3570114 47.500000 1 1 1 NCBI RefSeq GCF_000284455.1-RS_2024_08_13 2024-08-13 3347 3242 51 22193367 GCF_000284475.1 PRJNA224116 SAMEA2272430 na na 580047 813 Chlamydia trachomatis A2497 strain=A2497 na latest Complete Genome Major Full 2012-01-11 ASM28447v1 Wellcome Trust Sanger Institute GCA_000284475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/475/GCF_000284475.1_ASM28447v1/ na na na haploid bacteria 1044325 1044325 41.500000 1 1 1 NCBI RefSeq GCF_000284475.1-RS_2025_07_22 2025-07-22 948 880 46 na GCF_000284495.1 PRJNA224116 SAMEA3138414 na na 591946 562 Escherichia coli LF82 strain=LF82 na latest Complete Genome Major Full 2009-01-27 ASM28449v1 Genoscope GCA_000284495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/495/GCF_000284495.1_ASM28449v1/ na na na haploid bacteria 4773108 4773108 50.500000 1 1 1 NCBI RefSeq GCF_000284495.1-RS_2025_07_22 2025-07-22 4636 4404 113 na GCF_000284515.1 PRJNA224116 SAMEA2272168 na reference genome 866895 1570 Halobacillus halophilus DSM 2266 strain=type strain: DSM 2266 na latest Complete Genome Major Full 2012-04-11 ASM28451v1 Max-Planck-Institute of Biochemistry GCA_000284515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/515/GCF_000284515.1_ASM28451v1/ na assembly from type material na haploid bacteria 4170008 4170008 42.000000 3 3 3 NCBI RefSeq GCF_000284515.1-RS_2025_12_10 2025-12-10 4128 4007 92 22583374 GCF_000284535.1 PRJNA224116 SAMEA2272552 na na 1074252 1280 Staphylococcus aureus subsp. aureus HO 5096 0412 strain=HO 5096 0412 na latest Complete Genome Major Full 2012-04-23 ASM28453v1 Wellcome Trust Sanger Insititute GCA_000284535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/535/GCF_000284535.1_ASM28453v1/ na na na haploid bacteria 2832299 2832299 33.000000 1 1 1 NCBI RefSeq GCF_000284535.1-RS_2025_08_25 2025-08-25 2824 2650 82 23299977 GCF_000284555.1 PRJNA224116 SAMD00061003 na na 1089456 287 Pseudomonas aeruginosa NCGM2.S1 strain=NCGM2.S1 na latest Complete Genome Major Full 2011-09-29 ASM28455v1 National Center for Global Health and Medicine GCA_000284555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/555/GCF_000284555.1_ASM28455v1/ na na na haploid bacteria 6764661 6764661 66.000000 1 1 1 NCBI RefSeq GCF_000284555.1-RS_2025_03_16 2025-03-16 6360 6195 84 22123763 GCF_000284575.1 PRJNA224116 SAMD00061051 na na 1155071 1309 Streptococcus mutans LJ23 strain=LJ23 na latest Complete Genome Major Full 2012-03-05 ASM28457v1 Tokyo Medical and Dental University Graduate School of Medical and Dental Sciences GCA_000284575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/575/GCF_000284575.1_ASM28457v1/ na na na haploid bacteria 2015626 2015626 37.000000 1 1 1 NCBI RefSeq GCF_000284575.1-RS_2026_04_21 2026-04-21 1995 1848 84 22535936 GCF_000284615.1 PRJNA224116 SAMEA2272383 na reference genome 1163748 2743 Marinobacter nauticus ATCC 49840 strain=ATCC 49840 na latest Complete Genome Major Full 2012-03-27 ASM28461v1 Genoscope CEA GCA_000284615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/615/GCF_000284615.1_ASM28461v1/ na assembly from heterotypic synonym type material na haploid bacteria 3989480 3989480 57.500000 1 1 1 NCBI RefSeq GCF_000284615.1-RS_2025_08_25 2025-08-25 3681 3596 63 22689231 GCF_000284635.1 PRJNA224116 SAMD00061064 na reference genome 1172562 213 Helicobacter cinaedi PAGU611 strain=PAGU611 na latest Complete Genome Major Full 2012-04-23 ASM28463v1 Kazusa DNA Research Institute GCA_000284635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/635/GCF_000284635.1_ASM28463v1/ na na na haploid bacteria 2101402 2101402 38.500000 2 2 2 NCBI RefSeq GCF_000284635.1-RS_2026_01_19 2026-01-19 2215 2126 49 22740670 GCF_000284655.1 PRJNA224116 SAMN02472138 AGCA00000000.1 na 1005043 138073 Candidatus Regiella insecticola 5.15 strain=5.15 na latest Contig Major Full 2011-09-23 ASM28465v1 Yale University GCA_000284655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/655/GCF_000284655.1_ASM28465v1/ na na na haploid bacteria 2013072 2013072 42.500000 0 562 562 NCBI RefSeq GCF_000284655.1-RS_2025_12_03 2025-12-03 2253 1859 41 21948522 GCF_000284695.1 PRJNA224116 SAMN02436800 AGFO00000000.1 na 1042399 1584 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 strain=CNCM I-1632 na latest Contig Major Full 2011-10-28 ASM28469v1 Washington University School of Medicine, Center for Genome Sciences and Systems Biology GCA_000284695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/695/GCF_000284695.1_ASM28469v1/ na na na haploid bacteria 1767897 1767897 50.000000 0 69 69 NCBI RefSeq GCF_000284695.1-RS_2026_03_28 2026-03-28 1879 1661 72 22030749 GCF_000284715.1 PRJNA224116 SAMN02436863 AGHW00000000.1 na 1042400 1584 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519 strain=CNCM I-1519 na latest Contig Major Full 2011-10-28 ASM28471v1 Washington University School of Medicine Center for Genome Sciences and Systems Biology GCA_000284715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/715/GCF_000284715.1_ASM28471v1/ na na na haploid bacteria 1796539 1796539 50.000000 0 70 70 NCBI RefSeq GCF_000284715.1-RS_2026_03_28 2026-03-28 1926 1722 67 22030749 GCF_000284735.1 PRJNA224116 SAMN02436934 AGHX00000000.1 na 1042402 1358 Lactococcus lactis subsp. lactis CNCM I-1631 strain=CNCM I-1631 na latest Contig Major Full 2011-10-28 ASM28473v1 Washington University School of Medicine Center for Genome Sciences and Systems Biology GCA_000284735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/735/GCF_000284735.1_ASM28473v1/ na na na haploid bacteria 2511332 2511332 35.000000 0 131 131 NCBI RefSeq GCF_000284735.1-RS_2026_03_28 2026-03-28 2618 2473 51 22030749 GCF_000284755.1 PRJNA224116 SAMN01814037 AJGX00000000.1 na 1124941 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41563 strain=41563 na latest Contig Major Full 2012-03-27 ASM28475v1 FDA GCA_000284755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/755/GCF_000284755.1_ASM28475v1/ na na na haploid bacteria 4918161 4918161 52.000000 0 81 81 NCBI RefSeq GCF_000284755.1-RS_2025_04_26 2025-04-26 4875 4602 96 22628505 GCF_000284775.2 PRJNA224116 SAMN01814038 AJGY00000000.1 na 1128959 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 strain=41573 na latest Contig Major Full 2012-03-27 ASM28477v2 FDA GCA_000284775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/775/GCF_000284775.2_ASM28477v2/ na na na haploid bacteria 4908767 4908767 52.000000 2 145 145 NCBI RefSeq GCF_000284775.2-RS_2025_04_25 2025-04-25 4901 4526 92 22628505 GCF_000284795.1 PRJNA224116 SAMN01816203 AJGZ00000000.1 na 1124942 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41566 strain=41566 na latest Contig Major Full 2012-03-27 ASM28479v1 FDA GCA_000284795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/795/GCF_000284795.1_ASM28479v1/ na na na haploid bacteria 4908018 4908018 52.000000 0 101 101 NCBI RefSeq GCF_000284795.1-RS_2025_04_26 2025-04-26 4869 4591 96 22628505 GCF_000284815.1 PRJNA224116 SAMN01816204 AJHA00000000.1 na 1128963 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41565 strain=41565 na latest Contig Major Full 2012-03-27 ASM28481v1 FDA GCA_000284815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/815/GCF_000284815.1_ASM28481v1/ na na na haploid bacteria 4978043 4978043 52.000000 0 163 163 NCBI RefSeq GCF_000284815.1-RS_2025_04_26 2025-04-26 4974 4571 101 22628505 GCF_000284835.1 PRJNA224116 SAMN02393732 AJIK00000000.1 na 1160707 51173 Ureibacillus thermosphaericus str. Thermo-BF strain=Thermo-BF na latest Contig Major Full 2012-05-16 UreThermo-BF Agricultural Biotechnology Research Institute of Iran GCA_000284835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/835/GCF_000284835.1_UreThermo-BF/ na na na haploid bacteria 2846106 2846106 35.500000 0 63 63 NCBI RefSeq GCF_000284835.1-RS_2025_12_12 2025-12-12 2787 2718 31 22843574 GCF_000284895.1 PRJNA224116 SAMD00036595 BAEA00000000.1 na 1112349 1280 Staphylococcus aureus subsp. aureus NN50 strain=NN50 substr. aureus na latest Contig Major Full 2012-05-09 ASM28489v1 Niigata University Graduate School ofMedical and Dental Sciences GCA_000284895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/895/GCF_000284895.1_ASM28489v1/ na na na haploid bacteria 2822241 2822241 32.500000 0 65 65 NCBI RefSeq GCF_000284895.1-RS_2025_08_19 2025-08-19 2866 2682 70 na GCF_000284935.1 PRJNA224116 SAMEA2272355 CACU00000000.1 na 940287 630 Yersinia enterocolitica subsp. palearctica 556/8265 strain=556/8265 na latest Scaffold Major Full 2011-04-01 ASM28493v1 Max von Pettenkofer-Institute GCA_000284935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/935/GCF_000284935.1_ASM28493v1/ na na na haploid bacteria 4521393 4374903 47.000000 0 14 156 NCBI RefSeq GCF_000284935.1-RS_2026_02_15 2026-02-15 4014 3758 72 na GCF_000284955.1 PRJNA224116 SAMEA2272063 CACV00000000.1 na 940288 630 Yersinia enterocolitica subsp. palearctica 647/5307 strain=647/5307 na latest Scaffold Major Full 2011-04-01 ASM28495v1 Max von Pettenkofer-Institute GCA_000284955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/955/GCF_000284955.1_ASM28495v1/ na na na haploid bacteria 4553105 4426444 47.000000 0 18 186 NCBI RefSeq GCF_000284955.1-RS_2026_02_15 2026-02-15 4123 3801 102 na GCF_000284975.1 PRJNA224116 SAMEA2272449 CACW00000000.1 na 940289 630 Yersinia enterocolitica subsp. palearctica YO527 strain=YO527 na latest Scaffold Major Full 2011-04-01 ASM28497v1 Max von Pettenkofer-Institute GCA_000284975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/975/GCF_000284975.1_ASM28497v1/ na na na haploid bacteria 4658995 4565531 47.000000 0 20 448 NCBI RefSeq GCF_000284975.1-RS_2026_02_15 2026-02-15 4315 3991 91 na GCF_000284995.1 PRJNA224116 SAMEA2272185 CACY00000000.1 na 947557 630 Yersinia enterocolitica NFO strain=NFO na latest Contig Major Full 2011-04-01 ASM28499v1 Max von Pettenkofer-Institute GCA_000284995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/284/995/GCF_000284995.1_ASM28499v1/ na na na haploid bacteria 4663108 4663108 47.000000 0 97 97 NCBI RefSeq GCF_000284995.1-RS_2026_02_15 2026-02-15 4394 4105 93 na GCF_000285015.1 PRJNA224116 SAMEA2272317 CACZ00000000.1 na 947561 630 Yersinia enterocolitica IP2222 strain=IP2222 na latest Contig Major Full 2011-04-01 ASM28501v1 Max von Pettenkofer-Institute GCA_000285015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/015/GCF_000285015.1_ASM28501v1/ na na na haploid bacteria 4753960 4753960 47.000000 0 74 74 NCBI RefSeq GCF_000285015.1-RS_2026_02_15 2026-02-15 4403 4144 81 na GCF_000285075.1 PRJNA224116 SAMEA2272015 CADE00000000.1 na 981212 210 Helicobacter pylori NQ315 strain=NQ315 na latest Contig Major Full 2011-04-01 ASM28507v1 MHH Hannover Medical School GCA_000285075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/075/GCF_000285075.1_ASM28507v1/ na na na haploid bacteria 1601938 1601938 39.000000 0 57 57 NCBI RefSeq GCF_000285075.1-RS_2026_03_20 2026-03-20 1579 1439 42 21383187 GCF_000285095.1 PRJNA224116 SAMEA2272517 CADF00000000.1 na 981213 210 Helicobacter pylori NQ1712 strain=NQ1712 na latest Contig Major Full 2011-04-01 ASM28509v1 MHH Hannover Medical School GCA_000285095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/095/GCF_000285095.1_ASM28509v1/ na na na haploid bacteria 1572582 1572582 39.000000 0 62 62 NCBI RefSeq GCF_000285095.1-RS_2026_03_20 2026-03-20 1556 1412 42 21383187 GCF_000285155.1 PRJNA224116 SAMEA2272151 CADI00000000.1 na 981216 210 Helicobacter pylori NQ392 strain=NQ392 na latest Contig Major Full 2011-04-01 ASM28515v1 MHH Hannover Medical School GCA_000285155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/155/GCF_000285155.1_ASM28515v1/ na na na haploid bacteria 1654988 1654988 39.000000 0 80 80 NCBI RefSeq GCF_000285155.1-RS_2026_03_20 2026-03-20 1606 1458 42 21383187 GCF_000285175.1 PRJNA224116 SAMEA2272498 CADJ00000000.1 na 981217 210 Helicobacter pylori NQ1707 strain=NQ1707 na latest Contig Major Full 2011-04-01 ASM28517v1 MHH Hannover Medical School GCA_000285175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/175/GCF_000285175.1_ASM28517v1/ na na na haploid bacteria 1654738 1654738 39.000000 0 91 91 NCBI RefSeq GCF_000285175.1-RS_2026_03_20 2026-03-20 1619 1490 42 21383187 GCF_000285235.1 PRJNA224116 SAMEA2272392 CADM00000000.1 na 981220 210 Helicobacter pylori NQ1671 strain=NQ1671 na latest Contig Major Full 2011-04-01 ASM28523v1 MHH Hannover Medical School GCA_000285235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/235/GCF_000285235.1_ASM28523v1/ na na na haploid bacteria 1626950 1626950 39.000000 0 38 38 NCBI RefSeq GCF_000285235.1-RS_2026_03_20 2026-03-20 1584 1453 42 21383187 GCF_000285255.1 PRJNA224116 SAMEA2272109 CADN00000000.1 na 981221 210 Helicobacter pylori NQ4191 strain=NQ4191 na latest Contig Major Full 2011-04-01 ASM28525v1 MHH Hannover Medical School GCA_000285255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/255/GCF_000285255.1_ASM28525v1/ na na na haploid bacteria 1629065 1629065 39.000000 0 43 43 NCBI RefSeq GCF_000285255.1-RS_2026_03_20 2026-03-20 1586 1457 42 21383187 GCF_000285275.1 PRJNA224116 SAMEA2272494 CADO00000000.1 na 940265 438 Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471 strain=type strain:LMG 1262 na latest Scaffold Major Full 2012-01-13 ASM28527v1 Vital-IT - Swiss Institute of Bioinformatics GCA_000285275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/275/GCF_000285275.1_ASM28527v1/ na assembly from type material na haploid bacteria 2982393 2982262 53.000000 0 141 143 NCBI RefSeq GCF_000285275.1-RS_2025_12_15 2025-12-15 2865 2735 52 na GCF_000285295.1 PRJNA224116 SAMEA2272631 CADP00000000.1 na 940283 33995 Komagataeibacter europaeus LMG 18890 strain=type strain:LMG 18890 na latest Scaffold Major Full 2011-04-01 ASM28529v1 Vital-IT - Swiss Institute of Bioinformatics GCA_000285295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/295/GCF_000285295.1_ASM28529v1/ na assembly from type material na haploid bacteria 4227398 4226886 61.500000 0 321 341 NCBI RefSeq GCF_000285295.1-RS_2025_12_15 2025-12-15 4340 4029 75 na GCF_000285335.1 PRJNA224116 SAMEA2272389 CADS00000000.1 na 940285 33995 Komagataeibacter europaeus 5P3 strain=5P3 na latest Scaffold Major Full 2011-04-01 ASM28533v1 Vital-IT - Swiss Institute of Bioinformatics GCA_000285335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/335/GCF_000285335.1_ASM28533v1/ na na na haploid bacteria 3989313 3988883 61.500000 0 256 271 NCBI RefSeq GCF_000285335.1-RS_2025_12_15 2025-12-15 3994 3734 83 na GCF_000285375.1 PRJNA224116 SAMEA2272492 CADZ00000000.1 na 752789 562 Escherichia coli HM605 strain=HM605 na latest Scaffold Major Full 2011-07-11 ASM28537v1 University of Birmingham GCA_000285375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/375/GCF_000285375.1_ASM28537v1/ na na na haploid bacteria 5268935 5197255 50.500000 0 60 154 NCBI RefSeq GCF_000285375.1-RS_2025_06_09 2025-06-09 5254 4792 103 na GCF_000285395.1 PRJNA224116 SAMEA2272788 CAED00000000.1 na 1048261 303 Pseudomonas putida B001 strain=B001 na latest Contig Major Full 2011-08-24 ASM28539v1 Chonnam National University GCA_000285395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/395/GCF_000285395.1_ASM28539v1/ na na na haploid bacteria 5740939 5740939 62.000000 0 262 262 NCBI RefSeq GCF_000285395.1-RS_2025_04_15 2025-04-15 5525 5098 57 22072649 GCF_000285455.1 PRJNA224116 SAMEA2272181 CAEG00000000.1 na 1033731 1465754 Alistipes timonensis JC136 strain=P148 na latest Contig Major Full 2012-03-09 ASM28545v1 laboratoire URMITE GCA_000285455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/455/GCF_000285455.1_ASM28545v1/ na na na haploid bacteria 3489612 3489612 59.000000 0 38 38 NCBI RefSeq GCF_000285455.1-RS_2025_12_05 2025-12-05 2785 2701 55 na GCF_000285495.1 PRJNA224116 SAMEA2272754 CAER00000000.1 reference genome 946235 1465765 Oceanobacillus massiliensis str. N'diop strain=Ndiop na latest Scaffold Major Full 2012-07-19 ASM28549v1 laboratoire URMITE CNRS 6236 GCA_000285495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/495/GCF_000285495.1_ASM28549v1/ na assembly from type material na haploid bacteria 3593561 3539128 40.500000 0 50 120 NCBI RefSeq GCF_000285495.1-RS_2026_03_15 2026-03-15 3585 3404 87 na GCF_000285515.1 PRJNA224116 SAMEA2271960 CAES00000000.1 reference genome 1033743 1465766 Paenibacillus senegalensis JC66 strain=JC66 na latest Scaffold Major Full 2012-07-19 ASM28551v1 laboratoire URMITE CNRS 6236 GCA_000285515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/515/GCF_000285515.1_ASM28551v1/ na assembly from type material na haploid bacteria 5614755 5494973 48.000000 0 96 197 NCBI RefSeq GCF_000285515.1-RS_2025_12_11 2025-12-11 4960 4782 72 na GCF_000285535.1 PRJNA224116 SAMEA2272358 CAET00000000.1 reference genome 1033734 1033734 Bacillus timonensis strain=MM10403188 na latest Scaffold Major Full 2012-07-19 ASM28553v1 laboratoire URMITE CNRS 6236 GCA_000285535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/535/GCF_000285535.1_ASM28553v1/ na assembly from type material na haploid bacteria 4657724 4608729 37.500000 0 72 146 NCBI RefSeq GCF_000285535.1-RS_2025_12_13 2025-12-13 4634 4417 91 na GCF_000285555.1 PRJNA224116 SAMEA2272071 CAEU00000000.1 reference genome 1033739 1033739 Kurthia massiliensis strain=JC30 na latest Scaffold Major Full 2012-07-19 ASM28555v1 laboratoire URMITE CNRS 6236 GCA_000285555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/555/GCF_000285555.1_ASM28555v1/ na assembly from type material na haploid bacteria 3230817 3201696 39.500000 0 63 116 NCBI RefSeq GCF_000285555.1-RS_2025_08_06 2025-08-06 3323 3164 100 na GCF_000285575.1 PRJNA224116 SAMEA2272503 CAEV00000000.1 na 1033737 1465809 Clostridium senegalense JC122 strain=JC122T na latest Scaffold Major Full 2012-07-19 ASM28557v1 laboratoire URMITE CNRS 6236 GCA_000285575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/575/GCF_000285575.1_ASM28557v1/ na assembly from type material na haploid bacteria 3925888 3871245 27.000000 0 83 191 NCBI RefSeq GCF_000285575.1-RS_2026_01_27 2026-01-27 3770 3564 100 na GCF_000285595.1 PRJNA224116 SAMEA2272665 CAEW00000000.1 reference genome 1033740 1033740 Kurthia senegalensis strain=JC8E na latest Scaffold Major Full 2012-07-19 ASM28559v1 laboratoire URMITE CNRS 6236 GCA_000285595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/595/GCF_000285595.1_ASM28559v1/ na assembly from type material na haploid bacteria 2986769 2976740 38.000000 0 43 73 NCBI RefSeq GCF_000285595.1-RS_2025_12_09 2025-12-09 3077 2852 98 na GCF_000285675.1 PRJNA224116 SAMEA2272575 CAFR00000000.1 na 1111072 197 Campylobacter jejuni subsp. jejuni xy259 strain=xy259 na latest Contig Major Full 2012-01-13 ASM28567v1 Hannover Medical School, Institute for Microbiology GCA_000285675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/675/GCF_000285675.1_ASM28567v1/ na na na haploid bacteria 1709783 1709783 30.500000 0 68 68 NCBI RefSeq GCF_000285675.1-RS_2025_06_28 2025-06-28 1829 1691 44 na GCF_000285695.1 PRJNA224116 SAMEA2271955 CAFS00000000.1 na 1111073 197 Campylobacter jejuni subsp. jejuni RB922 strain=RB922 na latest Contig Major Full 2012-01-17 ASM28569v1 Hannover Medical School, Institute for Microbiology GCA_000285695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/695/GCF_000285695.1_ASM28569v1/ na na na haploid bacteria 1715324 1715324 30.500000 0 156 156 NCBI RefSeq GCF_000285695.1-RS_2025_06_28 2025-06-28 1928 1743 46 na GCF_000285715.1 PRJNA224116 SAMEA2272528 CAFT00000000.1 na 1111074 197 Campylobacter jejuni subsp. jejuni 6399 strain=6399 na latest Contig Major Full 2012-01-17 ASM28571v1 Hannover Medical School, Institute for Microbiology GCA_000285715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/715/GCF_000285715.1_ASM28571v1/ na na na haploid bacteria 1627034 1627034 30.500000 0 43 43 NCBI RefSeq GCF_000285715.1-RS_2025_07_09 2025-07-09 1713 1597 45 na GCF_000285735.1 PRJNA224116 SAMEA2272144 CAFU00000000.1 na 1111075 197 Campylobacter jejuni subsp. jejuni 04197 strain=04197 na latest Contig Major Full 2012-01-17 ASM28573v1 Hannover Medical School, Institute for Microbiology GCA_000285735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/735/GCF_000285735.1_ASM28573v1/ na na na haploid bacteria 1701336 1701336 30.500000 0 83 83 NCBI RefSeq GCF_000285735.1-RS_2025_06_27 2025-06-27 1867 1684 45 na GCF_000285755.1 PRJNA224116 SAMEA2272411 CAFV00000000.1 na 1111076 197 Campylobacter jejuni subsp. jejuni 04199 strain=04199 na latest Contig Major Full 2012-01-17 ASM28575v1 Hannover Medical School, Institute for Microbiology GCA_000285755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/755/GCF_000285755.1_ASM28575v1/ na na na haploid bacteria 1732222 1732222 30.500000 0 71 71 NCBI RefSeq GCF_000285755.1-RS_2025_07_16 2025-07-16 1877 1702 44 na GCF_000285775.1 PRJNA224116 SAMEA3138416 CAGJ00000000.1 na 1085630 346 Xanthomonas citri pv. punicae str. LMG 859 strain=LMG 859 na latest Contig Major Full 2012-01-25 ASM28577v1 Institute of Microbial Technology (CSIR), Chandigarh, India GCA_000285775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/775/GCF_000285775.1_ASM28577v1/ na assembly from pathotype material na haploid bacteria 4946642 4946642 65.000000 0 217 217 NCBI RefSeq GCF_000285775.1-RS_2026_05_17 2026-05-17 4335 3952 88 22493202 GCF_000285835.1 PRJNA224116 SAMEA2272372 CAHK00000000.1 reference genome 1033736 1033736 Brevibacterium senegalense strain=JC43 na latest Scaffold Major Full 2012-08-16 ASM28583v2 URMITE CNRS UMR 6236 IRD 198 GCA_000285835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/835/GCF_000285835.1_ASM28583v2/ na assembly from type material na haploid bacteria 3427329 3398858 70.000000 0 17 70 NCBI RefSeq GCF_000285835.1-RS_2026_05_01 2026-05-01 3143 3029 52 na GCF_000285875.1 PRJNA224116 SAMEA2272526 CAHU00000000.1 na 1133596 1255 Pediococcus pentosaceus IE-3 strain=IE-3 na latest Contig Major Full 2012-04-25 ASM28587v1 Institute of Microbial Technology (CSIR) GCA_000285875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/875/GCF_000285875.1_ASM28587v1/ na na na haploid bacteria 1802376 1802376 37.000000 0 91 91 NCBI RefSeq GCF_000285875.1-RS_2025_08_15 2025-08-15 1772 1689 56 22843596 GCF_000285915.1 PRJNA224116 SAMEA3138417 CAJD00000000.1 na 1176165 479117 Brevibacterium ravenspurgense 5401308 = CCUG 53855 strain=5401308 na latest Contig Major Full 2012-05-30 ASM28591v1 URMITE GCA_000285915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/915/GCF_000285915.1_ASM28591v1/ na assembly from heterotypic synonym type material na haploid bacteria 2349262 2349262 62.500000 0 26 26 NCBI RefSeq GCF_000285915.1-RS_2026_04_23 2026-04-23 2156 2084 49 na GCF_000285995.1 PRJNA224116 SAMN00828754 ALJK00000000.1 na 1115803 1655 Actinomyces naeslundii str. Howell 279 strain=Howell 279 na latest Contig Major Full 2012-08-08 AneasH279v1.0 J. Craig Venter Institute GCA_000285995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/285/995/GCF_000285995.1_AneasH279v1.0/ na assembly from type material na haploid bacteria 3114341 3114341 68.000000 0 243 243 NCBI RefSeq GCF_000285995.1-RS_2026_01_27 2026-01-27 2839 2565 61 na GCF_000286015.1 PRJNA224116 SAMN02471120 AJIJ00000000.1 na 1160702 1247 Oenococcus oeni AWRIB304 strain=AWRIB304 na latest Contig Major Full 2012-08-08 AWRIB304_v1 The Australian Wine Research Institute GCA_000286015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/015/GCF_000286015.1_AWRIB304_v1/ na na na haploid bacteria 1852239 1852239 38.000000 0 36 36 NCBI RefSeq GCF_000286015.1-RS_2026_01_23 2026-01-23 1932 1806 51 22863143 GCF_000286075.1 PRJNA224116 SAMN02428953 AJTZ00000000.1 na 699248 1341 Streptococcus ratti FA-1 = DSM 20564 strain=FA-1 na latest Contig Major Full 2012-08-08 ASM28607v1 Cornell University GCA_000286075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/075/GCF_000286075.1_ASM28607v1/ na assembly from type material na haploid bacteria 2062017 2062017 41.000000 0 6 6 NCBI RefSeq GCF_000286075.1-RS_2025_07_20 2025-07-20 2015 1914 31 na GCF_000286115.1 PRJNA224116 SAMN02471121 ALAD00000000.1 na 1167631 1247 Oenococcus oeni AWRIB318 strain=AWRIB318 na latest Contig Major Full 2012-08-09 AWRIB318_v1 The Australian Wine Research Institute GCA_000286115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/115/GCF_000286115.1_AWRIB318_v1/ na na na haploid bacteria 1808452 1808452 38.000000 0 26 26 NCBI RefSeq GCF_000286115.1-RS_2025_12_21 2025-12-21 1887 1755 51 22863143 GCF_000286135.1 PRJNA224116 SAMN02471122 ALAF00000000.1 na 1206770 1247 Oenococcus oeni AWRIB419 strain=AWRIB419 na latest Contig Major Full 2012-08-09 AWRIB419_v1 The Australian Wine Research Institute GCA_000286135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/135/GCF_000286135.1_AWRIB419_v1/ na na na haploid bacteria 1793208 1793208 38.000000 0 46 46 NCBI RefSeq GCF_000286135.1-RS_2026_01_06 2026-01-06 1882 1730 51 22863143 GCF_000286155.1 PRJNA224116 SAMN02471126 ALAE00000000.1 na 1206769 1247 Oenococcus oeni AWRIB418 strain=AWRIB418 na latest Contig Major Full 2012-08-09 AWRIB418_v1 The Australian Wine Research Institute GCA_000286155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/155/GCF_000286155.1_AWRIB418_v1/ na na na haploid bacteria 1838155 1838155 38.000000 0 34 34 NCBI RefSeq GCF_000286155.1-RS_2026_01_23 2026-01-23 1903 1778 51 22863143 GCF_000286175.1 PRJNA224116 SAMN02471123 ALAG00000000.1 na 1206771 1247 Oenococcus oeni AWRIB422 strain=AWRIB422 na latest Contig Major Full 2012-08-09 AWRIB422_v1 The Australian Wine Research Institute GCA_000286175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/175/GCF_000286175.1_AWRIB422_v1/ na na na haploid bacteria 1814530 1814530 38.000000 0 32 32 NCBI RefSeq GCF_000286175.1-RS_2026_01_23 2026-01-23 1912 1750 51 22863143 GCF_000286195.1 PRJNA224116 SAMN02471127 ALAH00000000.1 na 1206772 1247 Oenococcus oeni AWRIB548 strain=AWRIB548 na latest Contig Major Full 2012-08-09 AWRIB548_v1 The Australian Wine Research Institute GCA_000286195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/195/GCF_000286195.1_AWRIB548_v1/ na na na haploid bacteria 1835383 1835383 38.000000 0 29 29 NCBI RefSeq GCF_000286195.1-RS_2025_12_10 2025-12-10 1950 1787 51 22863143 GCF_000286215.1 PRJNA224116 SAMN02471117 ALAI00000000.1 na 1206773 1247 Oenococcus oeni AWRIB553 strain=AWRIB553 na latest Contig Major Full 2012-08-09 AWRIB553_v1 The Australian Wine Research Institute GCA_000286215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/215/GCF_000286215.1_AWRIB553_v1/ na na na haploid bacteria 1759113 1759113 38.000000 0 32 32 NCBI RefSeq GCF_000286215.1-RS_2025_12_21 2025-12-21 1823 1689 51 22863143 GCF_000286235.1 PRJNA224116 SAMN02471124 ALAK00000000.1 na 1206775 1247 Oenococcus oeni AWRIB576 strain=AWRIB576 na latest Contig Major Full 2012-08-09 AWRIB576_v1 The Australian Wine Research Institute GCA_000286235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/235/GCF_000286235.1_AWRIB576_v1/ na na na haploid bacteria 1877204 1877204 38.000000 0 28 28 NCBI RefSeq GCF_000286235.1-RS_2025_12_10 2025-12-10 1970 1837 51 22863143 GCF_000286255.1 PRJNA224116 SAMN02471118 ALAJ00000000.1 na 1206774 1247 Oenococcus oeni AWRIB568 strain=AWRIB568 na latest Contig Major Full 2012-08-09 AWRIB568_v1 The Australian Wine Research Institute GCA_000286255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/255/GCF_000286255.1_AWRIB568_v1/ na na na haploid bacteria 1874865 1874865 38.000000 0 31 31 NCBI RefSeq GCF_000286255.1-RS_2025_12_10 2025-12-10 1972 1836 51 22863143 GCF_000286295.1 PRJNA224116 SAMN02470675 ALIF00000000.1 na 1200793 1304 Streptococcus salivarius K12 strain=K12 na latest Contig Major Full 2012-08-10 SsalK12v1 Nestle Research Center GCA_000286295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/295/GCF_000286295.1_SsalK12v1/ na na na haploid bacteria 2426359 2426359 39.500000 1 7 7 NCBI RefSeq GCF_000286295.1-RS_2026_03_28 2026-03-28 2296 2132 84 23045482 GCF_000286315.1 PRJNA224116 SAMN02470170 ALJG00000000.1 na 1211706 1211706 Paenisporosarcina sp. TG20 strain=TG20 na latest Contig Major Full 2012-08-10 ASM28631v1 Korea Polar Research Institute GCA_000286315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/315/GCF_000286315.1_ASM28631v1/ na na na haploid bacteria 4115384 4115384 36.500000 0 365 365 NCBI RefSeq GCF_000286315.1-RS_2024_08_13 2024-08-13 3950 3731 84 23144390 GCF_000286335.1 PRJNA224116 SAMN02470143 AJTR00000000.1 na 1167632 71237 Mammaliicoccus vitulinus F1028 strain=F1028 na latest Contig Major Full 2012-08-10 StaVit1.0 Korea Food Research Institute GCA_000286335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/335/GCF_000286335.1_StaVit1.0/ na na na haploid bacteria 2559484 2559484 32.500000 0 223 223 NCBI RefSeq GCF_000286335.1-RS_2025_12_08 2025-12-08 2596 2502 36 23045483 GCF_000286355.1 PRJNA224116 SAMN02470141 AJXN00000000.1 na 1179225 592377 Kocuria atrinae C3-8 strain=C3-8 na latest Contig Major Full 2012-08-10 KocAtr1.0 Korea Food Research Institute GCA_000286355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/355/GCF_000286355.1_KocAtr1.0/ na na na haploid bacteria 3197170 3197170 63.500000 0 221 221 NCBI RefSeq GCF_000286355.1-RS_2026_03_10 2026-03-10 3527 2700 50 23045503 GCF_000286375.1 PRJNA224116 SAMN02470144 AJXM00000000.1 na 1179224 309788 Lysinibacillus boronitolerans F1182 strain=F1182 na latest Contig Major Full 2012-08-10 LysBor1.0 Korea Food Research Institute GCA_000286375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/375/GCF_000286375.1_LysBor1.0/ na na na haploid bacteria 4461358 4461358 37.500000 0 309 309 NCBI RefSeq GCF_000286375.1-RS_2026_03_28 2026-03-28 4840 4105 29 23045499 GCF_000286395.1 PRJNA224116 SAMN02470142 AJXO00000000.1 na 1179226 42858 Mammaliicoccus lentus F1142 strain=F1142 na latest Contig Major Full 2012-08-10 StaLen1.0 Korea Food Research Institute GCA_000286395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/395/GCF_000286395.1_StaLen1.0/ na na na haploid bacteria 2786799 2786799 32.000000 0 169 169 NCBI RefSeq GCF_000286395.1-RS_2026_03_20 2026-03-20 2860 2657 64 23045498 GCF_000286435.2 PRJNA224116 SAMN02603113 na na 1124991 582 Morganella morganii subsp. morganii KT na KT latest Complete Genome Major Full 2013-02-28 ASM28643v2 Changhua Christian Hospital GCA_000286435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/435/GCF_000286435.2_ASM28643v2/ na na na haploid bacteria 3799539 3799539 51.000000 1 1 1 NCBI RefSeq GCF_000286435.2-RS_2026_04_29 2026-04-29 3617 3482 101 23282187 GCF_000286455.1 PRJNA224116 SAMN00828780 ALKG00000000.1 na 936572 936572 Selenomonas sp. FOBRC6 strain=FOBRC6 na latest Contig Major Full 2012-08-10 SspFOBRC6v1.0 J. Craig Venter Institute GCA_000286455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/455/GCF_000286455.1_SspFOBRC6v1.0/ na na na haploid bacteria 2352554 2352554 57.000000 0 149 149 NCBI RefSeq GCF_000286455.1-RS_2024_08_13 2024-08-13 2334 2218 59 na GCF_000286475.1 PRJNA224116 SAMN00828789 ALKH00000000.1 na 1105032 1105032 Streptococcus sp. BS35b strain=BS35b na latest Contig Major Full 2012-08-10 SspBS35bv1.0 J. Craig Venter Institute GCA_000286475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/475/GCF_000286475.1_SspBS35bv1.0/ na na na haploid bacteria 1858462 1858462 41.000000 0 17 17 NCBI RefSeq GCF_000286475.1-RS_2025_08_25 2025-08-25 1828 1754 47 na GCF_000286495.1 PRJNA224116 SAMN00828791 ALKI00000000.1 na 936577 936577 Streptococcus sp. AS14 strain=AS14 na latest Contig Major Full 2012-08-10 SspAS14v1.0 J. Craig Venter Institute GCA_000286495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/495/GCF_000286495.1_SspAS14v1.0/ na na na haploid bacteria 2331493 2331493 43.000000 0 19 19 NCBI RefSeq GCF_000286495.1-RS_2024_08_05 2024-08-05 2297 2206 47 na GCF_000286535.1 PRJNA224116 SAMN02436485 ALII00000000.1 na 903899 470 Acinetobacter baumannii IS-123 strain=IS-123 na latest Contig Major Full 2012-08-10 gacin11v1.0 Walter Reed Army Institute of Research GCA_000286535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/535/GCF_000286535.1_gacin11v1.0/ na na na haploid bacteria 4063081 4063081 39.000000 3 20 20 NCBI RefSeq GCF_000286535.1-RS_2024_04_24 2024-04-24 3981 3659 95 26195261 GCF_000286555.1 PRJNA224116 SAMN00255228 ALIW00000000.1 na 985079 87883 Burkholderia multivorans ATCC BAA-247 strain=ATCC BAA-247 na latest Contig Major Full 2012-08-10 gbmulcf1v1.0 J. Craig Venter Institute GCA_000286555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/555/GCF_000286555.1_gbmulcf1v1.0/ na assembly from type material na haploid bacteria 6197304 6197304 67.000000 0 590 590 NCBI RefSeq GCF_000286555.1-RS_2026_03_28 2026-03-28 6003 5672 82 23105085 GCF_000286575.1 PRJNA224116 SAMN00255227 ALIX00000000.1 na 985078 87883 Burkholderia multivorans CF2 strain=CF2 na latest Contig Major Full 2012-08-10 gbmulcf2v1.0 J. Craig Venter Institute GCA_000286575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/575/GCF_000286575.1_gbmulcf2v1.0/ na na na haploid bacteria 6499618 6499618 67.000000 0 493 493 NCBI RefSeq GCF_000286575.1-RS_2026_03_28 2026-03-28 6273 5960 88 23105085 GCF_000286595.1 PRJNA224116 SAMN02436573 ALIR00000000.1 na 903900 40216 Acinetobacter radioresistens WC-A-157 strain=WC-A-157 na latest Contig Major Full 2012-08-10 gacin12v1.0 Walter Reed Army Institute of Research GCA_000286595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/595/GCF_000286595.1_gacin12v1.0/ na na na haploid bacteria 3209605 3209605 41.500000 4 21 21 NCBI RefSeq GCF_000286595.1-RS_2025_12_05 2025-12-05 3079 2892 104 na GCF_000286615.1 PRJNA224116 SAMN02436468 AFDN00000000.1 na 903895 470 Acinetobacter baumannii Canada BC-5 strain=Canada BC-5 na latest Contig Major Full 2012-08-10 gacin07v1.0 Walter Reed Army Institute of Research GCA_000286615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/615/GCF_000286615.1_gacin07v1.0/ na na na haploid bacteria 3998016 3998016 39.000000 1 3 3 NCBI RefSeq GCF_000286615.1-RS_2025_04_20 2025-04-20 3867 3673 96 26195261 GCF_000286635.1 PRJNA224116 SAMN00828793 ALKL00000000.1 na 936588 936588 Veillonella sp. ACP1 strain=ACP1 na latest Contig Major Full 2012-08-10 VspACP1v1.0 J. Craig Venter Institute GCA_000286635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/635/GCF_000286635.1_VspACP1v1.0/ na na na haploid bacteria 2042594 2042594 39.000000 0 26 26 NCBI RefSeq GCF_000286635.1-RS_2024_08_13 2024-08-13 1930 1858 60 na GCF_000286655.1 PRJNA224116 SAMN02470869 ALNS00000000.1 na 1216470 1216470 Enterobacter sp. SST3 strain=SST3 na latest Contig Major Full 2012-08-10 ASM28665v1 Rochester Institute of Technology GCA_000286655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/655/GCF_000286655.1_ASM28665v1/ na na na haploid bacteria 4626853 4626853 56.000000 0 63 63 NCBI RefSeq GCF_000286655.1-RS_2025_02_01 2025-02-01 4431 4278 83 23045495 GCF_000286675.1 PRJNA224116 SAMN02604156 na na 1159197 2096 Mycoplasmoides gallisepticum VA94_7994-1-7P strain=VA94_7994-1-7P na latest Complete Genome Major Full 2012-08-10 ASM28667v1 University of Connecticut GCA_000286675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/675/GCF_000286675.1_ASM28667v1/ na na na haploid bacteria 964110 964110 31.500000 1 1 1 NCBI RefSeq GCF_000286675.1-RS_2026_02_26 2026-02-26 787 720 41 22628486 GCF_000286695.1 PRJNA224116 SAMN02604157 na na 1159198 2096 Mycoplasmoides gallisepticum NC95_13295-2-2P strain=NC95_13295-2-2P na latest Complete Genome Major Full 2012-08-10 ASM28669v1 University of Connecticut GCA_000286695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/695/GCF_000286695.1_ASM28669v1/ na na na haploid bacteria 953989 953989 31.500000 1 1 1 NCBI RefSeq GCF_000286695.1-RS_2026_02_26 2026-02-26 773 709 41 22628486 GCF_000286715.1 PRJNA224116 SAMN02604158 na na 1159199 2096 Mycoplasmoides gallisepticum NC96_1596-4-2P strain=NC96_1596-4-2P na latest Complete Genome Major Full 2012-08-10 ASM28671v1 University of Connecticut GCA_000286715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/715/GCF_000286715.1_ASM28671v1/ na na na haploid bacteria 986257 986257 31.500000 1 1 1 NCBI RefSeq GCF_000286715.1-RS_2026_02_26 2026-02-26 789 722 41 22628486 GCF_000286735.1 PRJNA224116 SAMN02604159 na na 1159200 2096 Mycoplasmoides gallisepticum NY01_2001.047-5-1P strain=NY01_2001.047-5-1P na latest Complete Genome Major Full 2012-08-10 ASM28673v1 University of Connecticut GCA_000286735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/735/GCF_000286735.1_ASM28673v1/ na na na haploid bacteria 965525 965525 31.500000 1 1 1 NCBI RefSeq GCF_000286735.1-RS_2026_02_26 2026-02-26 783 715 41 22628486 GCF_000286755.1 PRJNA224116 SAMN02604160 na na 1159201 2096 Mycoplasmoides gallisepticum WI01_2001.043-13-2P strain=WI01_2001.043-13-2P na latest Complete Genome Major Full 2012-08-10 ASM28675v1 University of Connecticut GCA_000286755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/755/GCF_000286755.1_ASM28675v1/ na na na haploid bacteria 939844 939844 31.500000 1 1 1 NCBI RefSeq GCF_000286755.1-RS_2026_02_26 2026-02-26 764 697 41 22628486 GCF_000286775.1 PRJNA224116 SAMN02604161 na na 1159202 2096 Mycoplasmoides gallisepticum NC06_2006.080-5-2P strain=NC06_2006.080-5-2P na latest Complete Genome Major Full 2012-08-10 ASM28677v1 University of Connecticut GCA_000286775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/775/GCF_000286775.1_ASM28677v1/ na na na haploid bacteria 938869 938869 31.500000 1 1 1 NCBI RefSeq GCF_000286775.1-RS_2026_02_26 2026-02-26 766 698 41 22628486 GCF_000286795.1 PRJNA224116 SAMN02604162 na na 1159203 2096 Mycoplasmoides gallisepticum CA06_2006.052-5-2P strain=CA06_2006.052-5-2P na latest Complete Genome Major Full 2012-08-10 ASM28679v1 University of Connecticut GCA_000286795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/795/GCF_000286795.1_ASM28679v1/ na na na haploid bacteria 976412 976412 31.500000 1 1 1 NCBI RefSeq GCF_000286795.1-RS_2026_02_26 2026-02-26 783 714 41 22628486 GCF_000286815.1 PRJNA224116 SAMN02604163 na na 1159204 2096 Mycoplasmoides gallisepticum NC08_2008.031-4-3P strain=NC08_2008.031-4-3P na latest Complete Genome Major Full 2012-08-10 ASM28681v1 University of Connecticut GCA_000286815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/815/GCF_000286815.1_ASM28681v1/ na na na haploid bacteria 926650 926650 31.500000 1 1 1 NCBI RefSeq GCF_000286815.1-RS_2026_02_16 2026-02-16 760 693 41 22628486 GCF_000286835.2 PRJNA224116 SAMN02470474 AJYD00000000.2 na 1190603 188144 Enterovibrio norvegicus FF-33 strain=FF-33 na latest Scaffold Major Full 2016-09-16 ASM28683v2 MIT GCA_000286835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/835/GCF_000286835.2_ASM28683v2/ na na na haploid bacteria 5181803 5160361 47.500000 0 56 115 NCBI RefSeq GCF_000286835.2-RS_2025_06_03 2025-06-03 4601 4467 87 22955834 GCF_000286855.2 PRJNA224116 SAMN02470493 AJYE00000000.2 na 1190605 188144 Enterovibrio norvegicus FF-162 strain=FF-162 na latest Scaffold Major Full 2016-09-16 ASM28685v2 MIT GCA_000286855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/855/GCF_000286855.2_ASM28685v2/ na na na haploid bacteria 5051657 5051567 47.500000 0 472 481 NCBI RefSeq GCF_000286855.2-RS_2025_06_03 2025-06-03 4787 4546 62 22955834 GCF_000286935.2 PRJNA224116 SAMN02470497 AJYJ00000000.2 na 626086 688 Aliivibrio logei 5S-186 strain=5S-186 na latest Scaffold Major Full 2016-09-16 ASM28693v2 MIT GCA_000286935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/935/GCF_000286935.2_ASM28693v2/ na na na haploid bacteria 4451541 4451334 39.000000 0 145 163 NCBI RefSeq GCF_000286935.2-RS_2026_04_04 2026-04-04 4034 3965 24 22955834 GCF_000286955.2 PRJNA224116 SAMN02470453 AJYK00000000.2 na 1188252 76258 Vibrio rumoiensis 1S-45 strain=1S-45 na latest Scaffold Major Full 2016-09-16 ASM28695v2 MIT GCA_000286955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/955/GCF_000286955.2_ASM28695v2/ na na na haploid bacteria 3447496 3447396 41.000000 0 117 127 NCBI RefSeq GCF_000286955.2-RS_2025_06_02 2025-06-02 3084 3018 20 22955834 GCF_000286975.2 PRJNA224116 SAMN02470465 AJYL00000000.2 na 1188253 553239 Vibrio breoganii ZF-55 strain=ZF-55 na latest Scaffold Major Full 2016-09-16 ASM28697v2 MIT GCA_000286975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/975/GCF_000286975.2_ASM28697v2/ na na na haploid bacteria 4049629 4049439 45.000000 0 176 195 NCBI RefSeq GCF_000286975.2-RS_2026_04_04 2026-04-04 3691 3563 67 22955834 GCF_000286995.2 PRJNA224116 SAMN02470438 AJYM00000000.2 na 1188257 553239 Vibrio breoganii ZF-29 strain=ZF-29 na latest Scaffold Major Full 2016-09-16 ASM28699v2 MIT GCA_000286995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/286/995/GCF_000286995.2_ASM28699v2/ na na na haploid bacteria 4279312 4187378 45.000000 0 74 210 NCBI RefSeq GCF_000286995.2-RS_2026_04_04 2026-04-04 3864 3694 80 22955834 GCF_000287015.2 PRJNA224116 SAMN02470439 AJYO00000000.2 na 1187846 723171 Vibrio genomosp. F10 str. 9ZD137 strain=9ZD137 na latest Scaffold Major Full 2016-09-16 ASM28701v2 MIT GCA_000287015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/015/GCF_000287015.2_ASM28701v2/ na na na haploid bacteria 4267657 4267497 43.500000 0 1077 1093 NCBI RefSeq GCF_000287015.2-RS_2025_06_03 2025-06-03 4522 4115 24 22955834 GCF_000287035.2 PRJNA224116 SAMN02470486 AJYP00000000.2 na 1187847 723171 Vibrio genomosp. F10 str. 9ZC157 strain=9ZC157 na latest Scaffold Major Full 2016-09-16 ASM28703v2 MIT GCA_000287035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/035/GCF_000287035.2_ASM28703v2/ na na na haploid bacteria 4122950 4122760 43.500000 0 285 300 NCBI RefSeq GCF_000287035.2-RS_2025_06_03 2025-06-03 3789 3689 23 22955834 GCF_000287055.2 PRJNA224116 SAMN02470475 AJYQ00000000.2 na 1187848 723171 Vibrio genomosp. F10 str. ZF-129 strain=ZF-129 na latest Scaffold Major Full 2016-09-16 ASM28705v2 MIT GCA_000287055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/055/GCF_000287055.2_ASM28705v2/ na na na haploid bacteria 4418179 4417934 43.500000 0 137 161 NCBI RefSeq GCF_000287055.2-RS_2025_06_03 2025-06-03 4032 3963 30 22955834 GCF_000287075.2 PRJNA224116 SAMN02470476 AJYR00000000.2 na 617131 28174 Vibrio ordalii FF-167 strain=FF-167 na latest Scaffold Major Full 2016-09-16 ASM28707v2 MIT GCA_000287075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/075/GCF_000287075.2_ASM28707v2/ na na na haploid bacteria 3780662 3780622 45.000000 0 285 289 NCBI RefSeq GCF_000287075.2-RS_2026_04_04 2026-04-04 3495 3250 55 22955834 GCF_000287155.2 PRJNA224116 SAMN02470454 AJYS00000000.2 reference genome 617133 28174 Vibrio ordalii FS-238 strain=FS-238 na latest Scaffold Major Full 2016-09-16 ASM28715v2 MIT GCA_000287155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/155/GCF_000287155.2_ASM28715v2/ na na na haploid bacteria 3894846 3894596 44.500000 0 281 306 NCBI RefSeq GCF_000287155.2-RS_2026_04_04 2026-04-04 3558 3467 33 22955834 GCF_000287175.2 PRJNA224116 SAMN02470496 AJYI00000000.2 na 617135 668 Aliivibrio fischeri ZF-211 strain=ZF-211 na latest Scaffold Major Full 2016-09-16 ASM28717v2 MIT GCA_000287175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/175/GCF_000287175.2_ASM28717v2/ na na na haploid bacteria 4039204 4038938 38.500000 0 184 210 NCBI RefSeq GCF_000287175.2-RS_2026_04_16 2026-04-16 3698 3634 26 22955834 GCF_000287195.2 PRJNA224116 SAMN02470498 AJYN00000000.2 na 1187845 723171 Vibrio genomosp. F10 str. 9ZB36 strain=9ZB36 na latest Scaffold Major Full 2016-09-16 ASM28719v2 MIT GCA_000287195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/195/GCF_000287195.2_ASM28719v2/ na na na haploid bacteria 4264709 4264471 43.500000 0 174 194 NCBI RefSeq GCF_000287195.2-RS_2025_06_03 2025-06-03 3806 3712 30 22955834 GCF_000287215.2 PRJNA224116 SAMN02472129 na na 1208104 651 Aeromonas media WS strain=WS na latest Complete Genome Major Full 2014-04-22 ASM28721v3 College of Life Science, Wuhan University GCA_000287215.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/215/GCF_000287215.2_ASM28721v3/ na na na haploid bacteria 4788430 4788430 60.500000 2 2 2 NCBI RefSeq GCF_000287215.2-RS_2026_01_15 2026-01-15 4476 4105 162 23144426 GCF_000287235.1 PRJNA224116 SAMN02641648 na na 1202536 114186 Candidatus Carsonella ruddii CE isolate Thao2000 strain=CE Thao2000 latest Complete Genome Major Full 2012-08-13 ASM28723v1 Yale University GCA_000287235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/235/GCF_000287235.1_ASM28723v1/ na na na haploid bacteria 162589 162589 14.000000 1 1 1 NCBI RefSeq GCF_000287235.1-RS_2026_04_16 2026-04-16 220 190 29 22821013 GCF_000287255.1 PRJNA224116 SAMN02641649 na na 1202537 114186 Candidatus Carsonella ruddii CS isolate Thao2000 strain=CS Thao2000 latest Complete Genome Major Full 2012-08-13 ASM28725v1 Yale University GCA_000287255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/255/GCF_000287255.1_ASM28725v1/ na na na haploid bacteria 162504 162504 14.000000 1 1 1 NCBI RefSeq GCF_000287255.1-RS_2026_04_16 2026-04-16 220 190 28 22821013 GCF_000287275.1 PRJNA224116 SAMN02604335 na reference genome 1202538 114186 Candidatus Carsonella ruddii HC isolate Thao2000 strain=HC Thao2000 latest Complete Genome Major Full 2012-08-13 ASM28727v1 Yale University GCA_000287275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/275/GCF_000287275.1_ASM28727v1/ na na na haploid bacteria 166163 166163 14.000000 1 1 1 NCBI RefSeq GCF_000287275.1-RS_2026_04_16 2026-04-16 221 194 27 22821013 GCF_000287295.1 PRJNA224116 SAMN02641650 na na 1202539 114186 Candidatus Carsonella ruddii HT isolate Thao2000 strain=HT Thao2000 latest Complete Genome Major Full 2012-08-13 ASM28729v1 Yale University GCA_000287295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/295/GCF_000287295.1_ASM28729v1/ na na na haploid bacteria 157543 157543 14.500000 1 1 1 NCBI RefSeq GCF_000287295.1-RS_2026_03_28 2026-03-28 207 179 27 22821013 GCF_000287315.1 PRJNA224116 SAMN02641651 na na 1202540 114186 Candidatus Carsonella ruddii PC isolate NHV strain=PC NHV latest Complete Genome Major Full 2012-08-13 ASM28731v1 Yale University GCA_000287315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/315/GCF_000287315.1_ASM28731v1/ na na na haploid bacteria 159923 159923 15.500000 1 1 1 NCBI RefSeq GCF_000287315.1-RS_2026_03_28 2026-03-28 211 182 28 22821013 GCF_000287335.1 PRJNA224116 SAMN02604351 na reference genome 1199245 1199245 secondary endosymbiont of Ctenarytaina eucalypti na Ceuc_S latest Complete Genome Major Full 2012-08-13 ASM28733v1 Yale University GCA_000287335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/335/GCF_000287335.1_ASM28733v1/ na na na haploid bacteria 1441139 1441139 43.500000 1 1 1 NCBI RefSeq GCF_000287335.1-RS_2025_12_09 2025-12-09 786 722 45 22821013 GCF_000287355.1 PRJNA224116 SAMN02604352 na reference genome 134287 134287 secondary endosymbiont of Heteropsylla cubana na Hcub_S latest Complete Genome Major Full 2012-08-13 ASM28735v1 Yale University GCA_000287355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/355/GCF_000287355.1_ASM28735v1/ na na na haploid bacteria 1121596 1121596 29.000000 1 1 1 NCBI RefSeq GCF_000287355.1-RS_2025_12_09 2025-12-09 630 564 44 22821013 GCF_000287555.1 PRJNA224116 SAMN02471752 AKZW00000000.1 na 1194714 382 Sinorhizobium meliloti AE608H strain=AE608H na latest Scaffold Major Full 2012-08-13 SMAE608H_v1 University of Florence GCA_000287555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/555/GCF_000287555.1_SMAE608H_v1/ na na na haploid bacteria 7347181 7346977 62.000000 0 223 231 NCBI RefSeq GCF_000287555.1-RS_2026_04_25 2026-04-25 7286 6815 85 23431003 GCF_000287595.1 PRJNA224116 SAMN00829139 ALJO00000000.1 na 1161422 1328 Streptococcus anginosus SK1138 strain=SK1138 na latest Contig Major Full 2012-08-13 SanginSK1138v1.0 JCVI GCA_000287595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/595/GCF_000287595.1_SanginSK1138v1.0/ na na na haploid bacteria 1958191 1958191 38.500000 0 13 13 NCBI RefSeq GCF_000287595.1-RS_2026_01_30 2026-01-30 1945 1837 41 na GCF_000287615.1 PRJNA224116 SAMN00829138 ALJP00000000.1 reference genome 1078483 1078480 Haemophilus sputorum HK 2154 strain=HK 2154 na latest Contig Major Full 2012-08-13 HsputHK2154v1.0 JCVI GCA_000287615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/615/GCF_000287615.1_HsputHK2154v1.0/ na na na haploid bacteria 2080113 2080113 39.500000 0 25 25 NCBI RefSeq GCF_000287615.1-RS_2025_12_11 2025-12-11 2036 1958 57 na GCF_000287655.1 PRJNA224116 SAMN00828779 ALJR00000000.1 na 936573 936573 Selenomonas sp. FOBRC9 strain=FOBRC9 na latest Contig Major Full 2012-08-13 SspFOBRC9v1.0 J. Craig Venter Institute GCA_000287655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/655/GCF_000287655.1_SspFOBRC9v1.0/ na na na haploid bacteria 2336249 2336249 57.000000 0 49 49 NCBI RefSeq GCF_000287655.1-RS_2024_08_13 2024-08-13 2326 2250 62 na GCF_000287675.1 PRJNA224116 SAMN00828783 ALJL00000000.1 na 936594 936594 Lachnoanaerobaculum sp. ICM7 strain=ICM7 na latest Contig Major Full 2012-08-13 LspICM7v1.0 J. Craig Venter Institute GCA_000287675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/675/GCF_000287675.1_LspICM7v1.0/ na na na haploid bacteria 2779958 2779958 36.000000 0 38 38 NCBI RefSeq GCF_000287675.1-RS_2025_08_25 2025-08-25 2649 2528 60 na GCF_000287715.1 PRJNA224116 SAMN00829137 ALJN00000000.1 na 1161421 1303 Streptococcus oralis SK304 strain=SK304 na latest Contig Major Full 2012-08-13 SoralisSK304v1.0 JCVI GCA_000287715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/715/GCF_000287715.1_SoralisSK304v1.0/ na na na haploid bacteria 2020585 2020585 40.500000 0 25 25 NCBI RefSeq GCF_000287715.1-RS_2025_03_12 2025-03-12 2023 1932 35 na GCF_000287735.1 PRJNA224116 SAMN02469501 ALKA00000000.1 na 1214221 210 Helicobacter pylori HLJHP256 strain=HLJHP256 na latest Scaffold Major Full 2013-02-23 H_pylori_HLJHP256_v1.0 BGI-shenzhen GCA_000287735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/735/GCF_000287735.1_H_pylori_HLJHP256_v1.0/ na na na haploid bacteria 1576405 1561171 39.000000 0 14 40 NCBI RefSeq GCF_000287735.1-RS_2026_03_21 2026-03-21 1532 1405 43 23105058 GCF_000287755.1 PRJNA224116 SAMN02469502 ALKB00000000.1 na 1214222 210 Helicobacter pylori HLJHP271 strain=HLJHP271 na latest Scaffold Major Full 2013-02-23 H_pylori_HLJHP271_v1.0 BGI-shenzhen GCA_000287755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/755/GCF_000287755.1_H_pylori_HLJHP271_v1.0/ na na na haploid bacteria 1588229 1571832 39.000000 0 11 43 NCBI RefSeq GCF_000287755.1-RS_2026_03_21 2026-03-21 1575 1433 42 23105058 GCF_000287775.1 PRJNA224116 SAMN02469499 ALKC00000000.1 na 1214223 210 Helicobacter pylori HLJHP253 strain=HLJHP253 na latest Scaffold Major Full 2013-02-23 H_pylori_HLJHP253_v1.0 BGI-shenzhen GCA_000287775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/775/GCF_000287775.1_H_pylori_HLJHP253_v1.0/ na na na haploid bacteria 1589603 1587316 39.000000 0 11 20 NCBI RefSeq GCF_000287775.1-RS_2025_08_31 2025-08-31 1557 1408 42 na GCF_000287815.1 PRJNA224116 SAMN00996515 ALBV00000000.2 na 1194669 287 Pseudomonas aeruginosa N002 strain=N002 na latest Contig Major Full 2012-11-27 ASM28781v2 CSIR-NEIST, Jorhat GCA_000287815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/815/GCF_000287815.1_ASM28781v2/ na na na haploid bacteria 6050470 6050470 67.000000 0 235 235 NCBI RefSeq GCF_000287815.1-RS_2025_06_03 2025-06-03 5701 5521 81 23405324 GCF_000287835.1 PRJNA224116 SAMN02469498 ALJI00000000.1 na 1213457 210 Helicobacter pylori HLJHP193 strain=HLJHP193 na latest Scaffold Major Full 2013-02-22 ASM28783v1 BGI-shenzhen GCA_000287835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/835/GCF_000287835.1_ASM28783v1/ na na na haploid bacteria 1569327 1552322 39.000000 0 10 55 NCBI RefSeq GCF_000287835.1-RS_2026_03_21 2026-03-21 1543 1408 41 23105058 GCF_000287855.1 PRJNA224116 SAMN00828782 ALJJ00000000.1 na 936554 936554 Campylobacter sp. FOBRC14 strain=FOBRC14 na latest Contig Major Full 2012-08-15 CspFOBRC14v1.0 J. Craig Venter Institute GCA_000287855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/855/GCF_000287855.1_CspFOBRC14v1.0/ na na na haploid bacteria 2142354 2142354 44.000000 0 19 19 NCBI RefSeq GCF_000287855.1-RS_2025_08_25 2025-08-25 2255 2168 49 na GCF_000287875.1 PRJNA224116 SAMN02393806 ALJH00000000.1 na 1208103 287 Pseudomonas aeruginosa AH16 strain=AH16 na latest Contig Major Full 2012-08-15 AH16 Anhui University of Traditional Chinese Medicine GCA_000287875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/875/GCF_000287875.1_AH16/ na na na haploid bacteria 6765326 6765326 66.000000 0 130 130 NCBI RefSeq GCF_000287875.1-RS_2025_04_15 2025-04-15 6455 6229 70 23045492 GCF_000287915.1 PRJNA224116 SAMN02470946 ALNR00000000.1 na 1215087 303 Pseudomonas putida S12 strain=S12 na latest Contig Major Full 2012-08-15 ASM28791v1 Shanghai Jiao Tong University GCA_000287915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/915/GCF_000287915.1_ASM28791v1/ na na na haploid bacteria 6284656 6284656 61.500000 0 258 258 NCBI RefSeq GCF_000287915.1-RS_2025_08_14 2025-08-14 5902 5687 93 23045497 GCF_000287935.1 PRJNA224116 SAMN02596924 ALOG00000000.1 na 1183154 40324 Stenotrophomonas maltophilia Ab55555 strain=Ab55555 na latest Scaffold Major Full 2012-08-15 Sten_malt_Ab55555_V1 Broad Institute GCA_000287935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/935/GCF_000287935.1_Sten_malt_Ab55555_V1/ na na na haploid bacteria 4918930 4914508 66.000000 0 6 21 NCBI RefSeq GCF_000287935.1-RS_2026_05_15 2026-05-15 4570 4438 81 na GCF_000287955.1 PRJNA224116 SAMN00993326 ALSB00000000.1 na 1154874 1311 Streptococcus agalactiae MRI Z1-211 strain=MRI Z1-211 na latest Contig Major Full 2012-08-15 ASM28795v1 The J. Craig Venter Institute GCA_000287955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/955/GCF_000287955.1_ASM28795v1/ na na na haploid bacteria 2120507 2120507 35.500000 0 21 21 NCBI RefSeq GCF_000287955.1-RS_2026_01_02 2026-01-02 2140 2015 42 na GCF_000287995.1 PRJNA224116 SAMN00993350 ALRW00000000.1 na 1154861 1311 Streptococcus agalactiae LMG 14838 strain=LMG 14838 na latest Scaffold Major Full 2012-08-15 ASM28799v1 The J. Craig Venter Institute GCA_000287995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/287/995/GCF_000287995.1_ASM28799v1/ na na na haploid bacteria 2329129 2329118 35.500000 0 85 86 NCBI RefSeq GCF_000287995.1-RS_2026_01_13 2026-01-13 2394 2236 28 na GCF_000288015.1 PRJNA224116 SAMN00993317 ALSC00000000.1 na 1154875 1311 Streptococcus agalactiae MRI Z1-212 strain=MRI Z1-212 na latest Scaffold Major Full 2012-08-15 ASM28801v1 The J. Craig Venter Institute GCA_000288015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/015/GCF_000288015.1_ASM28801v1/ na na na haploid bacteria 2127808 2127767 35.500000 0 25 28 NCBI RefSeq GCF_000288015.1-RS_2026_01_12 2026-01-12 2141 2001 41 na GCF_000288035.1 PRJNA224116 SAMN00993319 ALSG00000000.1 na 1154884 1311 Streptococcus agalactiae LDS 617 strain=LDS 617 na latest Contig Major Full 2012-08-15 ASM28803v1 The J. Craig Venter Institute GCA_000288035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/035/GCF_000288035.1_ASM28803v1/ na na na haploid bacteria 2028914 2028914 35.500000 0 132 132 NCBI RefSeq GCF_000288035.1-RS_2026_01_06 2026-01-06 2236 2015 42 na GCF_000288055.1 PRJNA224116 SAMN00993453 ALSH00000000.1 na 1154886 1311 Streptococcus agalactiae LDS 628 strain=LDS 628 na latest Scaffold Major Full 2012-08-15 ASM28805v1 The J. Craig Venter Institute GCA_000288055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/055/GCF_000288055.1_ASM28805v1/ na na na haploid bacteria 2210260 2210249 36.000000 0 103 104 NCBI RefSeq GCF_000288055.1-RS_2026_01_13 2026-01-13 2267 2038 69 na GCF_000288075.1 PRJNA224116 SAMN00991154 ALSI00000000.1 na 1154888 1311 Streptococcus agalactiae str. Gottschalk 1003A strain=Gottschalk 1003A na latest Scaffold Major Full 2012-08-15 ASM28807v1 The J. Craig Venter Institute GCA_000288075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/075/GCF_000288075.1_ASM28807v1/ na na na haploid bacteria 2153312 2153242 35.500000 0 41 46 NCBI RefSeq GCF_000288075.1-RS_2026_01_04 2026-01-04 2164 2027 42 na GCF_000288095.1 PRJNA224116 SAMN00991162 ALSO00000000.1 na 1154894 1311 Streptococcus agalactiae GB00013 strain=GB00013 na latest Contig Major Full 2012-08-15 ASM28809v1 The J. Craig Venter Institute GCA_000288095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/095/GCF_000288095.1_ASM28809v1/ na na na haploid bacteria 2057709 2057709 35.500000 0 18 18 NCBI RefSeq GCF_000288095.1-RS_2026_01_02 2026-01-02 2074 1961 42 na GCF_000288115.1 PRJNA224116 SAMN00991160 ALSP00000000.1 na 1154895 1311 Streptococcus agalactiae GB00018 strain=GB00018 na latest Contig Major Full 2012-08-15 ASM28811v1 The J. Craig Venter Institute GCA_000288115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/115/GCF_000288115.1_ASM28811v1/ na na na haploid bacteria 1976852 1976852 35.000000 0 19 19 NCBI RefSeq GCF_000288115.1-RS_2026_01_07 2026-01-07 1988 1863 55 na GCF_000288135.1 PRJNA224116 SAMN00991159 ALSN00000000.1 na 1154893 1311 Streptococcus agalactiae GB00012 strain=GB00012 na latest Contig Major Full 2012-08-15 ASM28813v1 The J. Craig Venter Institute GCA_000288135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/135/GCF_000288135.1_ASM28813v1/ na na na haploid bacteria 2116560 2116560 35.500000 0 20 20 NCBI RefSeq GCF_000288135.1-RS_2026_01_02 2026-01-02 2137 1993 62 na GCF_000288155.1 PRJNA224116 SAMN00991158 ALSM00000000.1 na 1154892 1311 Streptococcus agalactiae GB00003 strain=GB00003 na latest Contig Major Full 2012-08-15 ASM28815v1 The J. Craig Venter Institute GCA_000288155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/155/GCF_000288155.1_ASM28815v1/ na na na haploid bacteria 2144077 2144077 35.500000 0 25 25 NCBI RefSeq GCF_000288155.1-RS_2026_01_02 2026-01-02 2193 2078 48 na GCF_000288175.1 PRJNA224116 SAMN00991184 ALTE00000000.1 na 1154910 1311 Streptococcus agalactiae GB00241 strain=GB00241 na latest Contig Major Full 2012-08-15 ASM28817v1 The J. Craig Venter Institute GCA_000288175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/175/GCF_000288175.1_ASM28817v1/ na na na haploid bacteria 2140281 2140281 35.500000 0 20 20 NCBI RefSeq GCF_000288175.1-RS_2026_01_02 2026-01-02 2209 2088 49 na GCF_000288195.1 PRJNA224116 SAMN00991185 ALTD00000000.1 na 1154909 1311 Streptococcus agalactiae GB00226 strain=GB00226 na latest Contig Major Full 2012-08-15 ASM28819v1 The J. Craig Venter Institute GCA_000288195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/195/GCF_000288195.1_ASM28819v1/ na na na haploid bacteria 2108970 2108970 35.500000 0 25 25 NCBI RefSeq GCF_000288195.1-RS_2026_01_02 2026-01-02 2132 2000 53 na GCF_000288215.1 PRJNA224116 SAMN00991161 ALSR00000000.1 na 1154897 1311 Streptococcus agalactiae GB00082 strain=GB00082 na latest Contig Major Full 2012-08-15 ASM28821v1 The J. Craig Venter Institute GCA_000288215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/215/GCF_000288215.1_ASM28821v1/ na na na haploid bacteria 2046028 2046028 35.000000 0 23 23 NCBI RefSeq GCF_000288215.1-RS_2026_01_02 2026-01-02 2071 1949 52 na GCF_000288235.1 PRJNA224116 SAMN00991163 ALSQ00000000.1 na 1154896 1311 Streptococcus agalactiae GB00020 strain=GB00020 na latest Contig Major Full 2012-08-15 ASM28823v1 The J. Craig Venter Institute GCA_000288235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/235/GCF_000288235.1_ASM28823v1/ na na na haploid bacteria 2064143 2064143 35.500000 0 24 24 NCBI RefSeq GCF_000288235.1-RS_2026_01_02 2026-01-02 2086 1955 51 na GCF_000288255.1 PRJNA224116 SAMN00991156 ALSS00000000.1 na 1154898 1311 Streptococcus agalactiae GB00083 strain=GB00083 na latest Contig Major Full 2012-08-15 ASM28825v1 The J. Craig Venter Institute GCA_000288255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/255/GCF_000288255.1_ASM28825v1/ na na na haploid bacteria 2073028 2073028 35.000000 0 21 21 NCBI RefSeq GCF_000288255.1-RS_2026_01_02 2026-01-02 2112 1990 49 na GCF_000288275.1 PRJNA224116 SAMN00991187 ALTG00000000.1 na 1154912 1311 Streptococcus agalactiae GB00247 strain=GB00247 na latest Contig Major Full 2012-08-15 ASM28827v1 The J. Craig Venter Institute GCA_000288275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/275/GCF_000288275.1_ASM28827v1/ na na na haploid bacteria 2004294 2004294 35.000000 0 16 16 NCBI RefSeq GCF_000288275.1-RS_2026_01_02 2026-01-02 1998 1885 54 na GCF_000288295.1 PRJNA224116 SAMN00991449 ALUK00000000.1 na 1154944 1311 Streptococcus agalactiae GB00901 strain=GB00901 na latest Contig Major Full 2012-08-15 ASM28829v1 The J. Craig Venter Institute GCA_000288295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/295/GCF_000288295.1_ASM28829v1/ na na na haploid bacteria 2179268 2179268 35.000000 0 24 24 NCBI RefSeq GCF_000288295.1-RS_2026_01_02 2026-01-02 2233 2109 44 na GCF_000288315.1 PRJNA224116 SAMN00991180 ALTH00000000.1 na 1154913 1311 Streptococcus agalactiae GB00264 strain=GB00264 na latest Contig Major Full 2012-08-15 ASM28831v1 The J. Craig Venter Institute GCA_000288315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/315/GCF_000288315.1_ASM28831v1/ na na na haploid bacteria 2057124 2057124 35.000000 0 32 32 NCBI RefSeq GCF_000288315.1-RS_2026_01_03 2026-01-03 2086 1968 40 na GCF_000288335.1 PRJNA224116 SAMN00991186 ALTF00000000.1 na 1154911 1311 Streptococcus agalactiae GB00245 strain=GB00245 na latest Contig Major Full 2012-08-15 ASM28833v1 The J. Craig Venter Institute GCA_000288335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/335/GCF_000288335.1_ASM28833v1/ na na na haploid bacteria 1929277 1929277 35.000000 0 18 18 NCBI RefSeq GCF_000288335.1-RS_2026_01_07 2026-01-07 1918 1818 42 na GCF_000288355.1 PRJNA224116 SAMN00991181 ALTI00000000.1 na 1154914 1311 Streptococcus agalactiae GB00279 strain=GB00279 na latest Contig Major Full 2012-08-15 ASM28835v1 The J. Craig Venter Institute GCA_000288355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/355/GCF_000288355.1_ASM28835v1/ na na na haploid bacteria 2106133 2106133 35.500000 0 27 27 NCBI RefSeq GCF_000288355.1-RS_2026_01_02 2026-01-02 2156 2040 33 na GCF_000288375.1 PRJNA224116 SAMN00991429 ALUL00000000.1 na 1154945 1311 Streptococcus agalactiae GB00904 strain=GB00904 na latest Contig Major Full 2012-08-15 ASM28837v1 The J. Craig Venter Institute GCA_000288375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/375/GCF_000288375.1_ASM28837v1/ na na na haploid bacteria 2174011 2174011 35.500000 0 38 38 NCBI RefSeq GCF_000288375.1-RS_2026_01_03 2026-01-03 2206 2058 60 na GCF_000288395.1 PRJNA224116 SAMN00991430 ALUN00000000.1 na 1154947 1311 Streptococcus agalactiae GB00911 strain=GB00911 na latest Contig Major Full 2012-08-15 ASM28839v1 The J. Craig Venter Institute GCA_000288395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/395/GCF_000288395.1_ASM28839v1/ na na na haploid bacteria 2025653 2025653 35.000000 0 25 25 NCBI RefSeq GCF_000288395.1-RS_2026_01_02 2026-01-02 2054 1939 52 na GCF_000288415.1 PRJNA224116 SAMN00991450 ALUM00000000.1 na 1154946 1311 Streptococcus agalactiae GB00909 strain=GB00909 na latest Contig Major Full 2012-08-15 ASM28841v1 The J. Craig Venter Institute GCA_000288415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/415/GCF_000288415.1_ASM28841v1/ na na na haploid bacteria 2066778 2066778 35.000000 0 22 22 NCBI RefSeq GCF_000288415.1-RS_2026_01_02 2026-01-02 2081 1959 49 na GCF_000288435.1 PRJNA224116 SAMN00991427 ALUP00000000.1 na 1154950 1311 Streptococcus agalactiae GB00922 strain=GB00922 na latest Contig Major Full 2012-08-15 ASM28843v1 The J. Craig Venter Institute GCA_000288435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/435/GCF_000288435.1_ASM28843v1/ na na na haploid bacteria 2117267 2117267 35.500000 0 17 17 NCBI RefSeq GCF_000288435.1-RS_2026_01_02 2026-01-02 2155 2039 51 na GCF_000288455.1 PRJNA224116 SAMN00991426 ALUO00000000.1 na 1154948 1311 Streptococcus agalactiae GB00914 strain=GB00914 na latest Contig Major Full 2012-08-15 ASM28845v1 The J. Craig Venter Institute GCA_000288455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/455/GCF_000288455.1_ASM28845v1/ na na na haploid bacteria 2041791 2041791 35.000000 0 25 25 NCBI RefSeq GCF_000288455.1-RS_2026_01_02 2026-01-02 2056 1937 43 na GCF_000288475.1 PRJNA224116 SAMN00991435 ALUQ00000000.1 na 1154951 1311 Streptococcus agalactiae GB00923 strain=GB00923 na latest Contig Major Full 2012-08-15 ASM28847v1 The J. Craig Venter Institute GCA_000288475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/475/GCF_000288475.1_ASM28847v1/ na na na haploid bacteria 2214586 2214586 35.500000 0 46 46 NCBI RefSeq GCF_000288475.1-RS_2026_01_11 2026-01-11 2271 2115 55 na GCF_000288495.1 PRJNA224116 SAMN00991436 ALUR00000000.1 na 1154952 1311 Streptococcus agalactiae GB00924 strain=GB00924 na latest Contig Major Full 2012-08-15 ASM28849v1 The J. Craig Venter Institute GCA_000288495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/495/GCF_000288495.1_ASM28849v1/ na na na haploid bacteria 2060223 2060223 35.500000 0 24 24 NCBI RefSeq GCF_000288495.1-RS_2026_01_02 2026-01-02 2088 1968 43 na GCF_000288515.1 PRJNA224116 SAMN00991362 ALUS00000000.1 na 1154953 1311 Streptococcus agalactiae GB00929 strain=GB00929 na latest Contig Major Full 2012-08-15 ASM28851v1 The J. Craig Venter Institute GCA_000288515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/515/GCF_000288515.1_ASM28851v1/ na na na haploid bacteria 2219539 2219539 35.500000 0 47 47 NCBI RefSeq GCF_000288515.1-RS_2026_01_11 2026-01-11 2271 2121 49 na GCF_000288535.1 PRJNA224116 SAMN00991363 ALUT00000000.1 na 1154954 1311 Streptococcus agalactiae GB00932 strain=GB00932 na latest Contig Major Full 2012-08-15 ASM28853v1 The J. Craig Venter Institute GCA_000288535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/535/GCF_000288535.1_ASM28853v1/ na na na haploid bacteria 1977906 1977906 35.000000 0 18 18 NCBI RefSeq GCF_000288535.1-RS_2026_01_07 2026-01-07 1979 1859 53 na GCF_000288555.1 PRJNA224116 SAMN00991447 ALUU00000000.1 na 1154955 1311 Streptococcus agalactiae GB00933 strain=GB00933 na latest Contig Major Full 2012-08-15 ASM28855v1 The J. Craig Venter Institute GCA_000288555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/555/GCF_000288555.1_ASM28855v1/ na na na haploid bacteria 2019991 2019991 35.000000 0 25 25 NCBI RefSeq GCF_000288555.1-RS_2026_01_02 2026-01-02 2052 1928 56 na GCF_000288575.1 PRJNA224116 SAMN00991364 ALUV00000000.1 na 1154957 1311 Streptococcus agalactiae GB00947 strain=GB00947 na latest Contig Major Full 2012-08-15 ASM28857v1 The J. Craig Venter Institute GCA_000288575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/575/GCF_000288575.1_ASM28857v1/ na na na haploid bacteria 2099800 2099800 35.500000 0 268 268 NCBI RefSeq GCF_000288575.1-RS_2026_01_13 2026-01-13 2239 2082 28 na GCF_000288595.1 PRJNA224116 SAMN00991433 ALUW00000000.1 na 1154960 1311 Streptococcus agalactiae GB00955 strain=GB00955 na latest Scaffold Major Full 2012-08-15 ASM28859v1 The J. Craig Venter Institute GCA_000288595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/595/GCF_000288595.1_ASM28859v1/ na na na haploid bacteria 2070808 2070794 35.000000 0 36 37 NCBI RefSeq GCF_000288595.1-RS_2026_01_03 2026-01-03 2088 1972 36 na GCF_000288615.1 PRJNA224116 SAMN00991434 ALUX00000000.1 na 1154962 1311 Streptococcus agalactiae GB00959 strain=GB00959 na latest Contig Major Full 2012-08-15 ASM28861v1 The J. Craig Venter Institute GCA_000288615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/615/GCF_000288615.1_ASM28861v1/ na na na haploid bacteria 2067662 2067662 35.500000 0 217 217 NCBI RefSeq GCF_000288615.1-RS_2026_02_17 2026-02-17 2166 2006 26 na GCF_000288635.1 PRJNA224116 SAMN00991367 ALUY00000000.1 na 1154965 1311 Streptococcus agalactiae GB00975 strain=GB00975 na latest Contig Major Full 2012-08-15 ASM28863v1 The J. Craig Venter Institute GCA_000288635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/635/GCF_000288635.1_ASM28863v1/ na na na haploid bacteria 2111000 2111000 35.500000 0 95 95 NCBI RefSeq GCF_000288635.1-RS_2025_08_18 2025-08-18 2153 1980 46 na GCF_000288655.1 PRJNA224116 SAMN00991368 ALUZ00000000.1 na 1154966 1311 Streptococcus agalactiae GB00984 strain=GB00984 na latest Contig Major Full 2012-08-15 ASM28865v1 The J. Craig Venter Institute GCA_000288655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/655/GCF_000288655.1_ASM28865v1/ na na na haploid bacteria 2148334 2148334 35.500000 0 56 56 NCBI RefSeq GCF_000288655.1-RS_2026_01_04 2026-01-04 2204 2063 46 na GCF_000288675.1 PRJNA224116 SAMN00991067 ALQK00000000.1 na 1154807 1311 Streptococcus agalactiae CCUG 19094 strain=CCUG 19094 na latest Contig Major Full 2012-08-15 ASM28867v1 The J. Craig Venter Institute GCA_000288675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/675/GCF_000288675.1_ASM28867v1/ na na na haploid bacteria 2178038 2178038 35.500000 0 52 52 NCBI RefSeq GCF_000288675.1-RS_2026_01_03 2026-01-03 2202 2064 55 na GCF_000288695.1 PRJNA224116 SAMN00991059 ALQL00000000.1 na 1154808 1311 Streptococcus agalactiae CCUG 24810 strain=CCUG 24810 na latest Contig Major Full 2012-08-15 ASM28869v1 The J. Craig Venter Institute GCA_000288695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/695/GCF_000288695.1_ASM28869v1/ na na na haploid bacteria 2162198 2162198 35.500000 0 40 40 NCBI RefSeq GCF_000288695.1-RS_2026_01_03 2026-01-03 2199 2069 49 na GCF_000288715.1 PRJNA224116 SAMN00991060 ALQM00000000.1 na 1154809 1311 Streptococcus agalactiae CCUG 25532 strain=CCUG 25532 na latest Contig Major Full 2012-08-15 ASM28871v1 The J. Craig Venter Institute GCA_000288715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/715/GCF_000288715.1_ASM28871v1/ na na na haploid bacteria 2075367 2075367 35.500000 0 20 20 NCBI RefSeq GCF_000288715.1-RS_2026_01_02 2026-01-02 2107 2006 42 na GCF_000288735.1 PRJNA224116 SAMN00991063 ALQN00000000.1 na 1154810 1311 Streptococcus agalactiae CCUG 37430 strain=CCUG 37430 na latest Contig Major Full 2012-08-15 ASM28873v1 The J. Craig Venter Institute GCA_000288735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/735/GCF_000288735.1_ASM28873v1/ na na na haploid bacteria 2096393 2096393 35.000000 0 20 20 NCBI RefSeq GCF_000288735.1-RS_2025_08_18 2025-08-18 2128 2021 45 na GCF_000288755.1 PRJNA224116 SAMN00991057 ALQO00000000.1 na 1154811 1311 Streptococcus agalactiae CCUG 37737 strain=CCUG 37737 na latest Scaffold Major Full 2012-08-15 ASM28875v1 The J. Craig Venter Institute GCA_000288755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/755/GCF_000288755.1_ASM28875v1/ na na na haploid bacteria 2193974 2193928 35.500000 0 43 47 NCBI RefSeq GCF_000288755.1-RS_2026_01_07 2026-01-07 2242 2106 47 na GCF_000288775.1 PRJNA224116 SAMN00991109 ALQP00000000.1 na 1154812 1311 Streptococcus agalactiae CCUG 37738 strain=CCUG 37738 na latest Contig Major Full 2012-08-15 ASM28877v1 The J. Craig Venter Institute GCA_000288775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/775/GCF_000288775.1_ASM28877v1/ na na na haploid bacteria 2165904 2165904 35.500000 0 31 31 NCBI RefSeq GCF_000288775.1-RS_2026_01_02 2026-01-02 2181 2062 43 na GCF_000288795.1 PRJNA224116 SAMN00991108 ALQQ00000000.1 na 1154813 1311 Streptococcus agalactiae CCUG 37741 strain=CCUG 37741 na latest Contig Major Full 2012-08-15 ASM28879v1 The J. Craig Venter Institute GCA_000288795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/795/GCF_000288795.1_ASM28879v1/ na na na haploid bacteria 2127447 2127447 35.500000 0 38 38 NCBI RefSeq GCF_000288795.1-RS_2026_01_04 2026-01-04 2141 2004 38 na GCF_000288815.1 PRJNA224116 SAMN00991112 ALQR00000000.1 na 1154814 1311 Streptococcus agalactiae CCUG 37742 strain=CCUG 37742 na latest Contig Major Full 2012-08-15 ASM28881v1 The J. Craig Venter Institute GCA_000288815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/815/GCF_000288815.1_ASM28881v1/ na na na haploid bacteria 2172709 2172709 35.500000 0 46 46 NCBI RefSeq GCF_000288815.1-RS_2026_01_13 2026-01-13 2175 1977 51 na GCF_000288855.1 PRJNA224116 SAMN00991104 ALQT00000000.1 na 1154816 1311 Streptococcus agalactiae CCUG 39096 A strain=CCUG 39096 A na latest Contig Major Full 2012-08-15 ASM28885v1 The J. Craig Venter Institute GCA_000288855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/855/GCF_000288855.1_ASM28885v1/ na na na haploid bacteria 2097622 2097622 35.000000 0 21 21 NCBI RefSeq GCF_000288855.1-RS_2026_01_02 2026-01-02 2123 2013 45 na GCF_000288875.1 PRJNA224116 SAMN00991103 ALQU00000000.1 na 1154817 1311 Streptococcus agalactiae CCUG 44077 strain=CCUG 44077 na latest Contig Major Full 2012-08-15 ASM28887v1 The J. Craig Venter Institute GCA_000288875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/875/GCF_000288875.1_ASM28887v1/ na na na haploid bacteria 2100821 2100821 35.500000 0 54 54 NCBI RefSeq GCF_000288875.1-RS_2026_01_03 2026-01-03 2168 2045 42 na GCF_000288895.1 PRJNA224116 SAMN00991096 ALQV00000000.1 na 1154818 1311 Streptococcus agalactiae CCUG 49087 strain=CCUG 49087 na latest Contig Major Full 2012-08-15 ASM28889v1 The J. Craig Venter Institute GCA_000288895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/895/GCF_000288895.1_ASM28889v1/ na na na haploid bacteria 2017196 2017196 35.500000 0 36 36 NCBI RefSeq GCF_000288895.1-RS_2026_01_07 2026-01-07 2026 1880 46 na GCF_000288915.1 PRJNA224116 SAMN00991085 ALQW00000000.1 na 1154819 1311 Streptococcus agalactiae LMG 15085 strain=LMG 15085 na latest Contig Major Full 2012-08-15 ASM28891v1 The J. Craig Venter Institute GCA_000288915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/915/GCF_000288915.1_ASM28891v1/ na na na haploid bacteria 1977272 1977272 35.000000 0 37 37 NCBI RefSeq GCF_000288915.1-RS_2026_01_11 2026-01-11 1993 1852 44 na GCF_000288935.1 PRJNA224116 SAMN00991128 ALQX00000000.1 na 1154820 1311 Streptococcus agalactiae LMG 15091 strain=LMG 15091 na latest Contig Major Full 2012-08-15 ASM28893v1 The J. Craig Venter Institute GCA_000288935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/935/GCF_000288935.1_ASM28893v1/ na na na haploid bacteria 2060902 2060902 35.500000 0 36 36 NCBI RefSeq GCF_000288935.1-RS_2026_01_04 2026-01-04 2127 1986 42 na GCF_000288955.1 PRJNA224116 SAMN00991125 ALQY00000000.1 na 1154821 1311 Streptococcus agalactiae LMG 15092 strain=LMG 15092 na latest Contig Major Full 2012-08-15 ASM28895v1 The J. Craig Venter Institute GCA_000288955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/955/GCF_000288955.1_ASM28895v1/ na na na haploid bacteria 2047243 2047243 35.000000 0 80 80 NCBI RefSeq GCF_000288955.1-RS_2026_01_06 2026-01-06 2194 1994 42 na GCF_000288975.1 PRJNA224116 SAMN00991129 ALQZ00000000.1 na 1154822 1311 Streptococcus agalactiae LMG 15093 strain=LMG 15093 na latest Contig Major Full 2012-08-15 ASM28897v1 The J. Craig Venter Institute GCA_000288975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/975/GCF_000288975.1_ASM28897v1/ na na na haploid bacteria 2121103 2121103 35.500000 0 121 121 NCBI RefSeq GCF_000288975.1-RS_2026_01_04 2026-01-04 2231 2086 52 na GCF_000288995.1 PRJNA224116 SAMN00991122 ALRA00000000.1 na 1154823 1311 Streptococcus agalactiae LMG 15094 strain=LMG 15094 na latest Contig Major Full 2012-08-15 ASM28899v1 The J. Craig Venter Institute GCA_000288995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/288/995/GCF_000288995.1_ASM28899v1/ na na na haploid bacteria 1981708 1981708 35.000000 0 35 35 NCBI RefSeq GCF_000288995.1-RS_2026_01_11 2026-01-11 1991 1853 38 na GCF_000289015.1 PRJNA224116 SAMN00991123 ALRB00000000.1 na 1154824 1311 Streptococcus agalactiae LMG 15095 strain=LMG 15095 na latest Contig Major Full 2012-08-15 ASM28901v1 The J. Craig Venter Institute GCA_000289015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/015/GCF_000289015.1_ASM28901v1/ na na na haploid bacteria 1986737 1986737 35.500000 0 33 33 NCBI RefSeq GCF_000289015.1-RS_2026_01_06 2026-01-06 1998 1852 50 na GCF_000289035.1 PRJNA224116 SAMN00991121 ALRC00000000.1 na 1154825 1311 Streptococcus agalactiae BSU450 strain=BSU450 na latest Scaffold Major Full 2012-08-15 ASM28903v1 The J. Craig Venter Institute GCA_000289035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/035/GCF_000289035.1_ASM28903v1/ na na na haploid bacteria 2017384 2017346 35.000000 0 40 43 NCBI RefSeq GCF_000289035.1-RS_2026_01_03 2026-01-03 2039 1922 43 na GCF_000289055.1 PRJNA224116 SAMN00991118 ALRD00000000.1 na 1154826 1311 Streptococcus agalactiae BSU442 strain=BSU442 na latest Contig Major Full 2012-08-15 ASM28905v1 The J. Craig Venter Institute GCA_000289055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/055/GCF_000289055.1_ASM28905v1/ na na na haploid bacteria 2115623 2115623 35.500000 0 84 84 NCBI RefSeq GCF_000289055.1-RS_2026_01_05 2026-01-05 2128 1958 63 na GCF_000289075.1 PRJNA224116 SAMN00991137 ALRG00000000.1 na 1154829 1311 Streptococcus agalactiae BSU178 strain=BSU178 na latest Contig Major Full 2012-08-15 ASM28907v1 The J. Craig Venter Institute GCA_000289075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/075/GCF_000289075.1_ASM28907v1/ na na na haploid bacteria 2192498 2192498 35.500000 0 62 62 NCBI RefSeq GCF_000289075.1-RS_2026_01_03 2026-01-03 2249 2108 59 na GCF_000289095.1 PRJNA224116 SAMN00993458 ALRL00000000.1 na 1154834 1311 Streptococcus agalactiae BSU167 strain=BSU167 na latest Scaffold Major Full 2012-08-15 ASM28909v1 The J. Craig Venter Institute GCA_000289095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/095/GCF_000289095.1_ASM28909v1/ na na na haploid bacteria 2244278 2244131 35.500000 0 88 95 NCBI RefSeq GCF_000289095.1-RS_2026_01_13 2026-01-13 2346 2161 46 na GCF_000289155.1 PRJNA224116 SAMN00993777 ALRO00000000.1 na 1154849 1311 Streptococcus agalactiae STIR-CD-21 strain=STIR-CD-21 na latest Contig Major Full 2012-08-15 ASM28915v1 The J. Craig Venter Institute GCA_000289155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/155/GCF_000289155.1_ASM28915v1/ na na na haploid bacteria 2145693 2145693 35.500000 0 53 53 NCBI RefSeq GCF_000289155.1-RS_2026_01_05 2026-01-05 2157 2003 46 na GCF_000289175.1 PRJNA224116 SAMN00993718 ALRP00000000.1 na 1154850 1311 Streptococcus agalactiae STIR-CD-22 strain=STIR-CD-22 na latest Contig Major Full 2012-08-15 ASM28917v1 The J. Craig Venter Institute GCA_000289175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/175/GCF_000289175.1_ASM28917v1/ na na na haploid bacteria 2135680 2135680 35.500000 0 54 54 NCBI RefSeq GCF_000289175.1-RS_2026_01_05 2026-01-05 2136 1989 45 na GCF_000289195.1 PRJNA224116 SAMN00993454 ALRQ00000000.1 na 1154851 1311 Streptococcus agalactiae STIR-CD-23 strain=STIR-CD-23 na latest Contig Major Full 2012-08-15 ASM28919v1 The J. Craig Venter Institute GCA_000289195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/195/GCF_000289195.1_ASM28919v1/ na na na haploid bacteria 2026334 2026334 35.500000 0 50 50 NCBI RefSeq GCF_000289195.1-RS_2026_01_04 2026-01-04 2051 1921 31 na GCF_000289215.1 PRJNA224116 SAMN00993775 ALRR00000000.1 na 1154852 1311 Streptococcus agalactiae STIR-CD-24 strain=STIR-CD-24 na latest Scaffold Major Full 2012-08-15 ASM28921v1 The J. Craig Venter Institute GCA_000289215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/215/GCF_000289215.1_ASM28921v1/ na na na haploid bacteria 2012832 2012815 35.500000 0 43 44 NCBI RefSeq GCF_000289215.1-RS_2026_01_06 2026-01-06 2019 1882 45 na GCF_000289235.1 PRJNA224116 SAMN00993658 ALRS00000000.1 na 1154855 1311 Streptococcus agalactiae STIR-CD-27 strain=STIR-CD-27 na latest Contig Major Full 2012-08-15 ASM28923v1 The J. Craig Venter Institute GCA_000289235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/235/GCF_000289235.1_ASM28923v1/ na na na haploid bacteria 2030786 2030786 35.500000 0 44 44 NCBI RefSeq GCF_000289235.1-RS_2026_01_03 2026-01-03 2059 1942 33 na GCF_000289255.1 PRJNA224116 SAMN00993773 ALRT00000000.1 na 1154856 1311 Streptococcus agalactiae STIR-CD-28 strain=STIR-CD-28 na latest Contig Major Full 2012-08-15 ASM28925v1 The J. Craig Venter Institute GCA_000289255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/255/GCF_000289255.1_ASM28925v1/ na na na haploid bacteria 2034960 2034960 35.500000 0 41 41 NCBI RefSeq GCF_000289255.1-RS_2026_01_04 2026-01-04 2059 1925 37 na GCF_000289275.1 PRJNA224116 SAMN00993347 ALRU00000000.1 na 1154858 1311 Streptococcus agalactiae LMG 14608 strain=LMG 14608 na latest Contig Major Full 2012-08-15 ASM28927v1 The J. Craig Venter Institute GCA_000289275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/275/GCF_000289275.1_ASM28927v1/ na na na haploid bacteria 2075344 2075344 35.500000 0 141 141 NCBI RefSeq GCF_000289275.1-RS_2026_01_13 2026-01-13 2170 2004 60 na GCF_000289315.1 PRJNA224116 SAMN00993343 ALRX00000000.1 na 1154863 1311 Streptococcus agalactiae MRI Z1-012 strain=MRI Z1-012 na latest Contig Major Full 2012-08-15 ASM28931v1 The J. Craig Venter Institute GCA_000289315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/315/GCF_000289315.1_ASM28931v1/ na na na haploid bacteria 2085887 2085887 35.500000 0 55 55 NCBI RefSeq GCF_000289315.1-RS_2026_01_04 2026-01-04 2141 2004 48 na GCF_000289335.1 PRJNA224116 SAMN00993341 ALRY00000000.2 na 1154866 1311 Streptococcus agalactiae MRI Z1-024 strain=MRI Z1-024 na latest Contig Major Full 2013-08-07 sag142_v2.0 The J. Craig Venter Institute GCA_000289335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/335/GCF_000289335.1_sag142_v2.0/ na na na haploid bacteria 2016342 2016342 35.000000 0 62 62 NCBI RefSeq GCF_000289335.1-RS_2026_01_12 2026-01-12 2059 1945 33 na GCF_000289355.1 PRJNA224116 SAMN00993339 ALRZ00000000.2 na 1154869 1311 Streptococcus agalactiae MRI Z1-038 strain=MRI Z1-038 na latest Contig Major Full 2013-08-08 sag145_v2.0 The J. Craig Venter Institute GCA_000289355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/355/GCF_000289355.1_sag145_v2.0/ na na na haploid bacteria 2079035 2079035 35.500000 0 38 38 NCBI RefSeq GCF_000289355.1-RS_2026_01_12 2026-01-12 2123 1991 51 na GCF_000289375.1 PRJNA224116 SAMN00993332 ALSD00000000.1 na 1154876 1311 Streptococcus agalactiae MRI Z1-213 strain=MRI Z1-213 na latest Scaffold Major Full 2012-08-15 ASM28937v1 The J. Craig Venter Institute GCA_000289375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/375/GCF_000289375.1_ASM28937v1/ na na na haploid bacteria 2346409 2346359 35.500000 0 86 89 NCBI RefSeq GCF_000289375.1-RS_2026_01_12 2026-01-12 2428 2230 63 na GCF_000289395.1 PRJNA224116 SAMN00993331 ALSE00000000.1 na 1154877 1311 Streptococcus agalactiae MRI Z1-214 strain=MRI Z1-214 na latest Contig Major Full 2012-08-15 ASM28939v1 The J. Craig Venter Institute GCA_000289395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/395/GCF_000289395.1_ASM28939v1/ na na na haploid bacteria 2298800 2298800 35.500000 0 107 107 NCBI RefSeq GCF_000289395.1-RS_2026_01_12 2026-01-12 2435 2253 46 na GCF_000289415.1 PRJNA224116 SAMN00993330 ALSF00000000.1 na 1154879 1311 Streptococcus agalactiae MRI Z1-216 strain=MRI Z1-216 na latest Contig Major Full 2012-08-15 ASM28941v1 The J. Craig Venter Institute GCA_000289415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/415/GCF_000289415.1_ASM28941v1/ na na na haploid bacteria 2389054 2389054 35.500000 0 86 86 NCBI RefSeq GCF_000289415.1-RS_2026_01_12 2026-01-12 2454 2248 67 na GCF_000289435.1 PRJNA224116 SAMN00991146 ALSJ00000000.1 na 1154889 1311 Streptococcus agalactiae str. Gottschalk 1005B strain=Gottschalk 1005B na latest Contig Major Full 2012-08-15 ASM28943v1 The J. Craig Venter Institute GCA_000289435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/435/GCF_000289435.1_ASM28943v1/ na na na haploid bacteria 2125230 2125230 35.500000 0 60 60 NCBI RefSeq GCF_000289435.1-RS_2026_01_04 2026-01-04 2170 2036 37 na GCF_000289455.1 PRJNA224116 SAMN00991141 ALSK00000000.1 na 1154890 1311 Streptococcus agalactiae str. Gottschalk 992B strain=Gottschalk 992B na latest Scaffold Major Full 2012-08-15 ASM28945v1 The J. Craig Venter Institute GCA_000289455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/455/GCF_000289455.1_ASM28945v1/ na na na haploid bacteria 2032609 2032563 35.500000 0 24 27 NCBI RefSeq GCF_000289455.1-RS_2026_01_13 2026-01-13 2051 1876 45 na GCF_000289475.1 PRJNA224116 SAMN00991164 ALSL00000000.1 na 1154891 1311 Streptococcus agalactiae GB00002 strain=GB00002 na latest Contig Major Full 2012-08-15 ASM28947v1 The J. Craig Venter Institute GCA_000289475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/475/GCF_000289475.1_ASM28947v1/ na na na haploid bacteria 1968747 1968747 35.000000 0 15 15 NCBI RefSeq GCF_000289475.1-RS_2026_01_07 2026-01-07 1960 1848 40 na GCF_000289495.1 PRJNA224116 SAMN00991150 ALSV00000000.1 na 1154901 1311 Streptococcus agalactiae GB00097 strain=GB00097 na latest Contig Major Full 2012-08-15 ASM28949v1 The J. Craig Venter Institute GCA_000289495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/495/GCF_000289495.1_ASM28949v1/ na na na haploid bacteria 2011985 2011985 35.000000 0 31 31 NCBI RefSeq GCF_000289495.1-RS_2026_01_04 2026-01-04 2018 1873 49 na GCF_000289515.1 PRJNA224116 SAMN00991147 ALTA00000000.1 na 1154906 1311 Streptococcus agalactiae GB00202 strain=GB00202 na latest Contig Major Full 2012-08-15 ASM28951v1 The J. Craig Venter Institute GCA_000289515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/515/GCF_000289515.1_ASM28951v1/ na na na haploid bacteria 2040828 2040828 35.500000 0 27 27 NCBI RefSeq GCF_000289515.1-RS_2026_01_02 2026-01-02 2064 1943 49 na GCF_000289535.1 PRJNA224116 SAMN00991148 ALTB00000000.1 na 1154907 1311 Streptococcus agalactiae GB00206 strain=GB00206 na latest Contig Major Full 2012-08-15 ASM28953v1 The J. Craig Venter Institute GCA_000289535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/535/GCF_000289535.1_ASM28953v1/ na na na haploid bacteria 2181324 2181324 35.500000 0 33 33 NCBI RefSeq GCF_000289535.1-RS_2026_01_03 2026-01-03 2201 2067 58 na GCF_000289555.1 PRJNA224116 SAMN00991188 ALTC00000000.1 na 1154908 1311 Streptococcus agalactiae GB00219 strain=GB00219 na latest Contig Major Full 2012-08-15 ASM28955v1 The J. Craig Venter Institute GCA_000289555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/555/GCF_000289555.1_ASM28955v1/ na na na haploid bacteria 2063236 2063236 35.500000 0 25 25 NCBI RefSeq GCF_000289555.1-RS_2026_01_02 2026-01-02 2088 1986 42 na GCF_000289575.1 PRJNA224116 SAMN00991182 ALTJ00000000.1 na 1154915 1311 Streptococcus agalactiae GB00300 strain=GB00300 na latest Contig Major Full 2012-08-15 ASM28957v1 The J. Craig Venter Institute GCA_000289575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/575/GCF_000289575.1_ASM28957v1/ na na na haploid bacteria 2171015 2171015 35.500000 0 37 37 NCBI RefSeq GCF_000289575.1-RS_2026_01_12 2026-01-12 2243 2111 48 na GCF_000289595.1 PRJNA224116 SAMN00991431 ALUB00000000.1 na 1154933 1311 Streptococcus agalactiae GB00867 strain=GB00867 na latest Contig Major Full 2012-08-15 ASM28959v1 The J. Craig Venter Institute GCA_000289595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/595/GCF_000289595.1_ASM28959v1/ na na na haploid bacteria 2040194 2040194 35.000000 0 23 23 NCBI RefSeq GCF_000289595.1-RS_2026_01_02 2026-01-02 2046 1934 40 na GCF_000289615.1 PRJNA224116 SAMN00991451 ALUC00000000.1 na 1154934 1311 Streptococcus agalactiae GB00874 strain=GB00874 na latest Contig Major Full 2012-08-15 ASM28961v1 The J. Craig Venter Institute GCA_000289615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/615/GCF_000289615.1_ASM28961v1/ na na na haploid bacteria 2148566 2148566 35.500000 0 40 40 NCBI RefSeq GCF_000289615.1-RS_2026_01_03 2026-01-03 2235 2105 48 na GCF_000289635.1 PRJNA224116 SAMN00991432 ALUD00000000.1 na 1154935 1311 Streptococcus agalactiae GB00884 strain=GB00884 na latest Contig Major Full 2012-08-15 ASM28963v1 The J. Craig Venter Institute GCA_000289635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/635/GCF_000289635.1_ASM28963v1/ na na na haploid bacteria 2095228 2095228 35.000000 0 34 34 NCBI RefSeq GCF_000289635.1-RS_2026_01_03 2026-01-03 2121 1999 41 na GCF_000289655.1 PRJNA224116 SAMN00991406 ALUE00000000.1 na 1154936 1311 Streptococcus agalactiae GB00887 strain=GB00887 na latest Contig Major Full 2012-08-15 ASM28965v1 The J. Craig Venter Institute GCA_000289655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/655/GCF_000289655.1_ASM28965v1/ na na na haploid bacteria 2011810 2011810 35.000000 0 22 22 NCBI RefSeq GCF_000289655.1-RS_2026_01_02 2026-01-02 2041 1929 49 na GCF_000289675.1 PRJNA224116 SAMN00991407 ALUF00000000.1 na 1154937 1311 Streptococcus agalactiae GB00888 strain=GB00888 na latest Contig Major Full 2012-08-15 ASM28967v1 The J. Craig Venter Institute GCA_000289675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/675/GCF_000289675.1_ASM28967v1/ na na na haploid bacteria 2020130 2020130 35.500000 0 43 43 NCBI RefSeq GCF_000289675.1-RS_2026_01_03 2026-01-03 2028 1901 43 na GCF_000289695.1 PRJNA224116 SAMN00991438 ALUJ00000000.1 na 1154942 1311 Streptococcus agalactiae GB00899 strain=GB00899 na latest Contig Major Full 2012-08-15 ASM28969v1 The J. Craig Venter Institute GCA_000289695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/695/GCF_000289695.1_ASM28969v1/ na na na haploid bacteria 2069238 2069238 35.500000 0 233 233 NCBI RefSeq GCF_000289695.1-RS_2026_01_13 2026-01-13 2242 2076 39 na GCF_000289715.1 PRJNA224116 SAMN00991439 ALVA00000000.1 na 1154967 1311 Streptococcus agalactiae GB00986 strain=GB00986 na latest Contig Major Full 2012-08-15 ASM28971v1 The J. Craig Venter Institute GCA_000289715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/715/GCF_000289715.1_ASM28971v1/ na na na haploid bacteria 1964382 1964382 35.000000 0 107 107 NCBI RefSeq GCF_000289715.1-RS_2026_01_11 2026-01-11 2008 1868 42 na GCF_000289735.1 PRJNA224116 SAMN00991440 ALVB00000000.1 na 1154968 1311 Streptococcus agalactiae GB00992 strain=GB00992 na latest Contig Major Full 2012-08-15 ASM28973v1 The J. Craig Venter Institute GCA_000289735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/735/GCF_000289735.1_ASM28973v1/ na na na haploid bacteria 1961067 1961067 35.000000 0 138 138 NCBI RefSeq GCF_000289735.1-RS_2026_01_11 2026-01-11 2030 1893 41 na GCF_000289755.1 PRJNA224116 SAMN00993327 ALQD00000000.1 na 1154783 1311 Streptococcus agalactiae FSL C1-494 strain=FSL C1-494 na latest Contig Major Full 2012-08-15 ASM28975v1 The J. Craig Venter Institute GCA_000289755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/755/GCF_000289755.1_ASM28975v1/ na na na haploid bacteria 2213226 2213226 35.500000 0 92 92 NCBI RefSeq GCF_000289755.1-RS_2026_01_11 2026-01-11 2267 2096 39 na GCF_000289775.1 PRJNA224116 SAMN00993314 ALQC00000000.1 na 1154781 1311 Streptococcus agalactiae FSL S3-277 strain=FSL S3-277 na latest Contig Major Full 2012-08-15 ASM28977v1 The J. Craig Venter Institute GCA_000289775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/775/GCF_000289775.1_ASM28977v1/ na na na haploid bacteria 2322187 2322187 36.000000 0 91 91 NCBI RefSeq GCF_000289775.1-RS_2026_01_13 2026-01-13 2322 2040 73 na GCF_000289795.1 PRJNA224116 SAMN00993321 ALQE00000000.1 na 1154788 1311 Streptococcus agalactiae FSL S3-501 strain=FSL S3-501 na latest Contig Major Full 2012-08-15 ASM28979v1 The J. Craig Venter Institute GCA_000289795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/795/GCF_000289795.1_ASM28979v1/ na na na haploid bacteria 2154161 2154161 35.500000 0 145 145 NCBI RefSeq GCF_000289795.1-RS_2026_01_13 2026-01-13 2289 2118 29 na GCF_000289815.1 PRJNA224116 SAMN00993452 ALQF00000000.1 na 1154789 1311 Streptococcus agalactiae FSL S3-603 strain=FSL S3-603 na latest Contig Major Full 2012-08-15 ASM28981v1 The J. Craig Venter Institute GCA_000289815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/815/GCF_000289815.1_ASM28981v1/ na na na haploid bacteria 2208269 2208269 35.500000 0 105 105 NCBI RefSeq GCF_000289815.1-RS_2026_01_13 2026-01-13 2297 2095 42 na GCF_000289835.1 PRJNA224116 SAMN00993311 ALQG00000000.1 na 1154792 1311 Streptococcus agalactiae FSL S3-170 strain=FSL S3-170 na latest Contig Major Full 2012-08-15 ASM28983v1 The J. Craig Venter Institute GCA_000289835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/835/GCF_000289835.1_ASM28983v1/ na na na haploid bacteria 2248514 2248514 35.500000 0 103 103 NCBI RefSeq GCF_000289835.1-RS_2026_01_13 2026-01-13 2312 2108 48 na GCF_000289855.1 PRJNA224116 SAMN00991083 ALQH00000000.1 na 1154795 1311 Streptococcus agalactiae FSL S3-337 strain=FSL S3-337 na latest Contig Major Full 2012-08-15 ASM28985v1 The J. Craig Venter Institute GCA_000289855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/855/GCF_000289855.1_ASM28985v1/ na na na haploid bacteria 2100745 2100745 35.000000 0 46 46 NCBI RefSeq GCF_000289855.1-RS_2026_01_04 2026-01-04 2140 1998 39 na GCF_000289875.1 PRJNA224116 SAMN00991077 ALQI00000000.1 na 1154800 1311 Streptococcus agalactiae FSL F2-343 strain=FSL F2-343 na latest Contig Major Full 2012-08-15 ASM28987v1 The J. Craig Venter Institute GCA_000289875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/875/GCF_000289875.1_ASM28987v1/ na na na haploid bacteria 2127628 2127628 35.500000 0 17 17 NCBI RefSeq GCF_000289875.1-RS_2026_01_02 2026-01-02 2147 2042 42 na GCF_000289895.1 PRJNA224116 SAMN00991115 ALRE00000000.1 na 1154827 1311 Streptococcus agalactiae BSU247 strain=BSU247 na latest Contig Major Full 2012-08-15 ASM28989v1 The J. Craig Venter Institute GCA_000289895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/895/GCF_000289895.1_ASM28989v1/ na na na haploid bacteria 2091971 2091971 35.000000 0 17 17 NCBI RefSeq GCF_000289895.1-RS_2026_01_12 2026-01-12 2102 1958 38 na GCF_000289915.1 PRJNA224116 SAMN00991073 ALQJ00000000.1 na 1154806 1311 Streptococcus agalactiae FSL S3-003 strain=FSL S3-003 na latest Contig Major Full 2012-08-15 ASM28991v1 The J. Craig Venter Institute GCA_000289915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/915/GCF_000289915.1_ASM28991v1/ na na na haploid bacteria 2113723 2113723 35.500000 0 32 32 NCBI RefSeq GCF_000289915.1-RS_2026_01_03 2026-01-03 2142 2016 45 na GCF_000289935.1 PRJNA224116 SAMN00991127 ALRF00000000.1 na 1154828 1311 Streptococcus agalactiae BSU188 strain=BSU188 na latest Contig Major Full 2012-08-15 ASM28993v1 The J. Craig Venter Institute GCA_000289935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/935/GCF_000289935.1_ASM28993v1/ na na na haploid bacteria 2159324 2159324 35.000000 0 131 131 NCBI RefSeq GCF_000289935.1-RS_2026_01_13 2026-01-13 2259 2110 35 na GCF_000289955.1 PRJNA224116 SAMN00991132 ALRH00000000.1 na 1154830 1311 Streptococcus agalactiae BSU96 strain=BSU96 na latest Contig Major Full 2012-08-15 ASM28995v1 The J. Craig Venter Institute GCA_000289955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/955/GCF_000289955.1_ASM28995v1/ na na na haploid bacteria 2084053 2084053 35.500000 0 32 32 NCBI RefSeq GCF_000289955.1-RS_2026_01_06 2026-01-06 2126 1974 40 na GCF_000289975.1 PRJNA224116 SAMN00991133 ALRI00000000.1 na 1154831 1311 Streptococcus agalactiae BSU165 strain=BSU165 na latest Contig Major Full 2012-08-15 ASM28997v1 The J. Craig Venter Institute GCA_000289975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/975/GCF_000289975.1_ASM28997v1/ na na na haploid bacteria 2169009 2169009 35.500000 0 30 30 NCBI RefSeq GCF_000289975.1-RS_2026_01_02 2026-01-02 2226 2097 50 na GCF_000289995.1 PRJNA224116 SAMN00991135 ALRJ00000000.1 na 1154832 1311 Streptococcus agalactiae BSU92 strain=BSU92 na latest Contig Major Full 2012-08-15 ASM28999v1 The J. Craig Venter Institute GCA_000289995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/289/995/GCF_000289995.1_ASM28999v1/ na na na haploid bacteria 2065334 2065334 35.500000 0 18 18 NCBI RefSeq GCF_000289995.1-RS_2026_01_02 2026-01-02 2138 2030 44 na GCF_000290015.1 PRJNA224116 SAMN00991130 ALRK00000000.1 na 1154833 1311 Streptococcus agalactiae BSU108 strain=BSU108 na latest Contig Major Full 2012-08-15 ASM29001v1 The J. Craig Venter Institute GCA_000290015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/015/GCF_000290015.1_ASM29001v1/ na na na haploid bacteria 2098717 2098717 35.500000 0 24 24 NCBI RefSeq GCF_000290015.1-RS_2026_01_02 2026-01-02 2140 2017 43 na GCF_000290035.1 PRJNA224116 SAMN00991157 ALST00000000.1 na 1154899 1311 Streptococcus agalactiae GB00084 strain=GB00084 na latest Contig Major Full 2012-08-15 ASM29003v1 The J. Craig Venter Institute GCA_000290035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/035/GCF_000290035.1_ASM29003v1/ na na na haploid bacteria 2038059 2038059 35.500000 0 20 20 NCBI RefSeq GCF_000290035.1-RS_2026_01_02 2026-01-02 2080 1964 53 na GCF_000290055.1 PRJNA224116 SAMN00991149 ALSU00000000.1 na 1154900 1311 Streptococcus agalactiae GB00092 strain=GB00092 na latest Contig Major Full 2012-08-15 ASM29005v1 The J. Craig Venter Institute GCA_000290055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/055/GCF_000290055.1_ASM29005v1/ na na na haploid bacteria 2204144 2204144 35.500000 0 47 47 NCBI RefSeq GCF_000290055.1-RS_2026_01_10 2026-01-10 2213 2061 53 na GCF_000290075.1 PRJNA224116 SAMN00991151 ALSW00000000.1 na 1154902 1311 Streptococcus agalactiae GB00111 strain=GB00111 na latest Contig Major Full 2012-08-15 ASM29007v1 The J. Craig Venter Institute GCA_000290075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/075/GCF_000290075.1_ASM29007v1/ na na na haploid bacteria 2095665 2095665 35.500000 0 34 34 NCBI RefSeq GCF_000290075.1-RS_2026_01_05 2026-01-05 2114 1946 61 na GCF_000290095.1 PRJNA224116 SAMN00991152 ALSX00000000.1 na 1154903 1311 Streptococcus agalactiae GB00115 strain=GB00115 na latest Contig Major Full 2012-08-15 ASM29009v1 The J. Craig Venter Institute GCA_000290095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/095/GCF_000290095.1_ASM29009v1/ na na na haploid bacteria 1985020 1985020 35.500000 0 35 35 NCBI RefSeq GCF_000290095.1-RS_2026_01_07 2026-01-07 2012 1863 45 na GCF_000290115.1 PRJNA224116 SAMN00991155 ALSY00000000.1 na 1154904 1311 Streptococcus agalactiae GB00174 strain=GB00174 na latest Contig Major Full 2012-08-15 ASM29011v1 The J. Craig Venter Institute GCA_000290115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/115/GCF_000290115.1_ASM29011v1/ na na na haploid bacteria 2083290 2083290 35.500000 0 74 74 NCBI RefSeq GCF_000290115.1-RS_2026_01_03 2026-01-03 2071 1937 61 na GCF_000290135.1 PRJNA224116 SAMN00991153 ALSZ00000000.1 na 1154905 1311 Streptococcus agalactiae GB00190 strain=GB00190 na latest Contig Major Full 2012-08-15 ASM29013v1 The J. Craig Venter Institute GCA_000290135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/135/GCF_000290135.1_ASM29013v1/ na na na haploid bacteria 1970327 1970327 35.000000 0 20 20 NCBI RefSeq GCF_000290135.1-RS_2026_01_07 2026-01-07 1966 1861 43 na GCF_000290155.1 PRJNA224116 SAMN00991183 ALTK00000000.1 na 1154916 1311 Streptococcus agalactiae GB00535 strain=GB00535 na latest Contig Major Full 2012-08-15 ASM29015v1 The J. Craig Venter Institute GCA_000290155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/155/GCF_000290155.1_ASM29015v1/ na na na haploid bacteria 2028624 2028624 35.000000 0 24 24 NCBI RefSeq GCF_000290155.1-RS_2026_01_02 2026-01-02 2044 1934 46 na GCF_000290175.1 PRJNA224116 SAMN00991179 ALTL00000000.1 na 1154917 1311 Streptococcus agalactiae GB00543 strain=GB00543 na latest Contig Major Full 2012-08-15 ASM29017v1 The J. Craig Venter Institute GCA_000290175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/175/GCF_000290175.1_ASM29017v1/ na na na haploid bacteria 2126844 2126844 35.500000 0 37 37 NCBI RefSeq GCF_000290175.1-RS_2026_01_03 2026-01-03 2157 2015 52 na GCF_000290195.1 PRJNA224116 SAMN01091759 ALTM00000000.1 na 1154918 1311 Streptococcus agalactiae GB00548 strain=GB00548 na latest Contig Major Full 2012-08-15 ASM29019v1 The J. Craig Venter Institute GCA_000290195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/195/GCF_000290195.1_ASM29019v1/ na na na haploid bacteria 2035949 2035949 35.500000 0 16 16 NCBI RefSeq GCF_000290195.1-RS_2026_01_02 2026-01-02 2048 1933 54 na GCF_000290215.1 PRJNA224116 SAMN00991405 ALUG00000000.1 na 1154938 1311 Streptococcus agalactiae GB00891 strain=GB00891 na latest Contig Major Full 2012-08-15 ASM29021v1 The J. Craig Venter Institute GCA_000290215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/215/GCF_000290215.1_ASM29021v1/ na na na haploid bacteria 2031048 2031048 35.500000 0 35 35 NCBI RefSeq GCF_000290215.1-RS_2026_01_06 2026-01-06 2035 1886 51 na GCF_000290235.1 PRJNA224116 SAMN00991178 ALTN00000000.1 na 1154919 1311 Streptococcus agalactiae GB00555 strain=GB00555 na latest Contig Major Full 2012-08-15 ASM29023v1 The J. Craig Venter Institute GCA_000290235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/235/GCF_000290235.1_ASM29023v1/ na na na haploid bacteria 2087164 2087164 35.000000 0 29 29 NCBI RefSeq GCF_000290235.1-RS_2026_01_02 2026-01-02 2100 1983 47 na GCF_000290255.1 PRJNA224116 SAMN00991176 ALTO00000000.1 na 1154920 1311 Streptococcus agalactiae GB00557 strain=GB00557 na latest Contig Major Full 2012-08-15 ASM29025v1 The J. Craig Venter Institute GCA_000290255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/255/GCF_000290255.1_ASM29025v1/ na na na haploid bacteria 2038910 2038910 35.500000 0 36 36 NCBI RefSeq GCF_000290255.1-RS_2026_01_06 2026-01-06 2067 1917 38 na GCF_000290275.1 PRJNA224116 SAMN00991177 ALTP00000000.1 na 1154921 1311 Streptococcus agalactiae GB00561 strain=GB00561 na latest Contig Major Full 2012-08-15 ASM29027v1 The J. Craig Venter Institute GCA_000290275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/275/GCF_000290275.1_ASM29027v1/ na na na haploid bacteria 2195534 2195534 35.500000 0 44 44 NCBI RefSeq GCF_000290275.1-RS_2026_01_10 2026-01-10 2257 2138 44 na GCF_000290295.1 PRJNA224116 SAMN00991175 ALTQ00000000.1 na 1154922 1311 Streptococcus agalactiae GB00588 strain=GB00588 na latest Contig Major Full 2012-08-15 ASM29029v1 The J. Craig Venter Institute GCA_000290295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/295/GCF_000290295.1_ASM29029v1/ na na na haploid bacteria 2060223 2060223 35.000000 0 20 20 NCBI RefSeq GCF_000290295.1-RS_2026_01_02 2026-01-02 2054 1951 38 na GCF_000290315.1 PRJNA224116 SAMN00991174 ALTR00000000.1 na 1154923 1311 Streptococcus agalactiae GB00601 strain=GB00601 na latest Contig Major Full 2012-08-15 ASM29031v1 The J. Craig Venter Institute GCA_000290315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/315/GCF_000290315.1_ASM29031v1/ na na na haploid bacteria 2038778 2038778 35.000000 0 21 21 NCBI RefSeq GCF_000290315.1-RS_2026_01_02 2026-01-02 2062 1948 49 na GCF_000290335.1 PRJNA224116 SAMN00991173 ALTS00000000.1 na 1154924 1311 Streptococcus agalactiae GB00614 strain=GB00614 na latest Contig Major Full 2012-08-15 ASM29033v1 The J. Craig Venter Institute GCA_000290335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/335/GCF_000290335.1_ASM29033v1/ na na na haploid bacteria 2147880 2147880 35.000000 0 37 37 NCBI RefSeq GCF_000290335.1-RS_2026_01_04 2026-01-04 2169 2030 42 na GCF_000290355.1 PRJNA224116 SAMN00991172 ALTT00000000.1 na 1154925 1311 Streptococcus agalactiae GB00640 strain=GB00640 na latest Contig Major Full 2012-08-15 ASM29035v1 The J. Craig Venter Institute GCA_000290355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/355/GCF_000290355.1_ASM29035v1/ na na na haploid bacteria 2077100 2077100 35.500000 0 17 17 NCBI RefSeq GCF_000290355.1-RS_2026_01_02 2026-01-02 2088 1986 42 na GCF_000290375.1 PRJNA224116 SAMN00991170 ALTU00000000.1 na 1154926 1311 Streptococcus agalactiae GB00651 strain=GB00651 na latest Contig Major Full 2012-08-15 ASM29037v1 The J. Craig Venter Institute GCA_000290375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/375/GCF_000290375.1_ASM29037v1/ na na na haploid bacteria 2072398 2072398 35.500000 0 31 31 NCBI RefSeq GCF_000290375.1-RS_2026_01_02 2026-01-02 2113 1995 42 na GCF_000290395.1 PRJNA224116 SAMN00991169 ALTW00000000.1 na 1154928 1311 Streptococcus agalactiae GB00654 strain=GB00654 na latest Contig Major Full 2012-08-15 ASM29039v1 The J. Craig Venter Institute GCA_000290395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/395/GCF_000290395.1_ASM29039v1/ na na na haploid bacteria 2035312 2035312 35.500000 0 32 32 NCBI RefSeq GCF_000290395.1-RS_2026_01_04 2026-01-04 2101 1953 55 na GCF_000290415.1 PRJNA224116 SAMN00991171 ALTV00000000.1 na 1154927 1311 Streptococcus agalactiae GB00653 strain=GB00653 na latest Contig Major Full 2012-08-15 ASM29041v1 The J. Craig Venter Institute GCA_000290415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/415/GCF_000290415.1_ASM29041v1/ na na na haploid bacteria 2172270 2172270 35.500000 0 43 43 NCBI RefSeq GCF_000290415.1-RS_2026_01_03 2026-01-03 2218 2106 32 na GCF_000290435.1 PRJNA224116 SAMN00991167 ALTX00000000.1 na 1154929 1311 Streptococcus agalactiae GB00663 strain=GB00663 na latest Contig Major Full 2012-08-15 ASM29043v1 The J. Craig Venter Institute GCA_000290435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/435/GCF_000290435.1_ASM29043v1/ na na na haploid bacteria 2132546 2132546 35.500000 0 38 38 NCBI RefSeq GCF_000290435.1-RS_2026_01_03 2026-01-03 2166 2034 47 na GCF_000290455.1 PRJNA224116 SAMN00991166 ALTZ00000000.1 na 1154931 1311 Streptococcus agalactiae GB00864 strain=GB00864 na latest Contig Major Full 2012-08-15 ASM29045v1 The J. Craig Venter Institute GCA_000290455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/455/GCF_000290455.1_ASM29045v1/ na na na haploid bacteria 2037929 2037929 35.000000 0 39 39 NCBI RefSeq GCF_000290455.1-RS_2026_01_03 2026-01-03 2073 1926 60 na GCF_000290475.1 PRJNA224116 SAMN00991168 ALTY00000000.1 na 1154930 1311 Streptococcus agalactiae GB00679 strain=GB00679 na latest Contig Major Full 2012-08-15 ASM29047v1 The J. Craig Venter Institute GCA_000290475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/475/GCF_000290475.1_ASM29047v1/ na na na haploid bacteria 2018503 2018503 35.500000 0 40 40 NCBI RefSeq GCF_000290475.1-RS_2026_01_05 2026-01-05 2062 1914 41 na GCF_000290495.1 PRJNA224116 SAMN00991165 ALUA00000000.1 na 1154932 1311 Streptococcus agalactiae GB00865 strain=GB00865 na latest Contig Major Full 2012-08-15 ASM29049v1 The J. Craig Venter Institute GCA_000290495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/495/GCF_000290495.1_ASM29049v1/ na na na haploid bacteria 2204262 2204262 35.500000 0 45 45 NCBI RefSeq GCF_000290495.1-RS_2026_01_11 2026-01-11 2262 2113 49 na GCF_000290515.1 PRJNA224116 SAMN00993715 ALUH00000000.1 na 1154939 1311 Streptococcus agalactiae GB00893 strain=GB00893 na latest Contig Major Full 2012-08-15 ASM29051v1 The J. Craig Venter Institute GCA_000290515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/515/GCF_000290515.1_ASM29051v1/ na na na haploid bacteria 2088546 2088546 35.000000 0 31 31 NCBI RefSeq GCF_000290515.1-RS_2026_01_02 2026-01-02 2097 1976 43 na GCF_000290535.1 PRJNA224116 SAMN00991437 ALUI00000000.1 na 1154941 1311 Streptococcus agalactiae GB00897 strain=GB00897 na latest Contig Major Full 2012-08-15 ASM29053v1 The J. Craig Venter Institute GCA_000290535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/535/GCF_000290535.1_ASM29053v1/ na na na haploid bacteria 2044720 2044720 35.000000 0 284 284 NCBI RefSeq GCF_000290535.1-RS_2026_01_13 2026-01-13 2199 2029 26 na GCF_000290555.2 PRJNA224116 SAMN02470713 ALPS00000000.1 na 1214916 287 Pseudomonas aeruginosa PABL056 strain=PABL056 na latest Scaffold Minor Full 2012-08-16 ASM29055v2 Northwestern University Feinberg School of Medicine GCA_000290555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/555/GCF_000290555.2_ASM29055v2/ na na na haploid bacteria 7277677 7276726 65.500000 0 390 400 NCBI RefSeq GCF_000290555.2-RS_2025_04_26 2025-04-26 7295 6971 74 23045505 GCF_000290575.1 PRJNA224116 SAMN02469371 ALKD00000000.1 na 1213458 1314 Streptococcus pyogenes BJCYGAS15 strain=BJCYGAS15 na latest Scaffold Major Full 2012-08-16 ASM29057v1 State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000290575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/575/GCF_000290575.1_ASM29057v1/ na na na haploid bacteria 1849643 1848733 38.500000 0 45 50 NCBI RefSeq GCF_000290575.1-RS_2026_03_20 2026-03-20 1837 1733 40 23045496 GCF_000290595.1 PRJNA224116 SAMN02469372 ALKE00000000.1 na 1214224 1314 Streptococcus pyogenes HLJGAS12011 strain=HLJGAS12011 na latest Scaffold Major Full 2012-08-16 ASM29059v1 State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China GCA_000290595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/595/GCF_000290595.1_ASM29059v1/ na na na haploid bacteria 1896097 1894759 38.500000 0 30 38 NCBI RefSeq GCF_000290595.1-RS_2025_04_15 2025-04-15 1892 1786 44 23045496 GCF_000290615.1 PRJNA224116 SAMN02470949 ALAS00000000.1 na 1121088 1398 Heyndrickxia coagulans DSM 1 = ATCC 7050 strain=DSM 1 na latest Contig Major Full 2012-08-16 ASM29061v1 Shanghai Jiao Tong Univeristy GCA_000290615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/615/GCF_000290615.1_ASM29061v1/ na assembly from type material na haploid bacteria 3018045 3018045 47.000000 0 307 307 NCBI RefSeq GCF_000290615.1-RS_2025_08_26 2025-08-26 3140 2879 109 23105047 GCF_000290715.1 PRJNA224116 SAMN02596876 AHFM00000000.1 na 1053244 1396 Bacillus cereus VD200 strain=VD200 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD200_V1 Broad Institute GCA_000290715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/715/GCF_000290715.1_Baci_cere_VD200_V1/ na na na haploid bacteria 6274216 6087340 35.000000 0 14 133 NCBI RefSeq GCF_000290715.1-RS_2026_06_22 2026-06-22 6282 5761 92 na GCF_000290735.1 PRJNA224116 SAMN02596873 AHFJ00000000.1 na 1053241 1396 Bacillus cereus VD169 strain=VD169 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD169_V1 Broad Institute GCA_000290735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/735/GCF_000290735.1_Baci_cere_VD169_V1/ na na na haploid bacteria 5951374 5859047 35.000000 0 4 73 NCBI RefSeq GCF_000290735.1-RS_2026_05_24 2026-05-24 6012 5682 109 na GCF_000290755.1 PRJNA224116 SAMN02596872 AHFI00000000.1 na 1053240 1396 Bacillus cereus VD166 strain=VD166 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD166_V1 Broad Institute GCA_000290755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/755/GCF_000290755.1_Baci_cere_VD166_V1/ na na na haploid bacteria 6146840 6093866 34.500000 0 11 53 NCBI RefSeq GCF_000290755.1-RS_2026_05_24 2026-05-24 6258 5966 108 na GCF_000290775.1 PRJNA224116 SAMN02596871 AHFH00000000.1 na 1053239 1396 Bacillus cereus VD156 strain=VD156 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD156_V1 Broad Institute GCA_000290775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/775/GCF_000290775.1_Baci_cere_VD156_V1/ na na na haploid bacteria 6421299 6333646 34.500000 0 15 80 NCBI RefSeq GCF_000290775.1-RS_2025_06_04 2025-06-04 6583 6126 116 na GCF_000290795.1 PRJNA224116 SAMN02596870 AHFG00000000.1 na 1053238 1396 Bacillus cereus VD154 strain=VD154 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD154_V1 Broad Institute GCA_000290795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/795/GCF_000290795.1_Baci_cere_VD154_V1/ na na na haploid bacteria 6305592 6161831 35.000000 0 19 118 NCBI RefSeq GCF_000290795.1-RS_2026_06_22 2026-06-22 6512 6058 107 na GCF_000290915.1 PRJNA224116 SAMN02596858 AHEU00000000.1 na 1053226 1396 Bacillus cereus VD048 strain=VD048 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD048_V1 Broad Institute GCA_000290915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/915/GCF_000290915.1_Baci_cere_VD048_V1/ na na na haploid bacteria 6038572 5975635 35.000000 0 11 62 NCBI RefSeq GCF_000290915.1-RS_2025_08_25 2025-08-25 6173 5762 122 na GCF_000290955.1 PRJNA224116 SAMN02596796 AHCK00000000.1 na 718223 1396 Bacillus cereus VD022 strain=VD022 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD022_G8177_V1 Broad Institute GCA_000290955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/955/GCF_000290955.1_Baci_cere_VD022_G8177_V1/ na na na haploid bacteria 6685242 6651469 34.500000 0 31 92 NCBI RefSeq GCF_000290955.1-RS_2025_08_14 2025-08-14 6898 6504 102 na GCF_000290975.2 PRJNA224116 SAMN02596797 AHCL00000000.2 na 718224 1396 Bacillus cereus VD142 strain=VD142 na latest Scaffold Major Full 2013-06-18 Baci_cere_VD142_V2 Broad Institute GCA_000290975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/290/975/GCF_000290975.2_Baci_cere_VD142_V2/ na na na haploid bacteria 5923913 5892123 35.000000 0 20 62 NCBI RefSeq GCF_000290975.2-RS_2025_03_09 2025-03-09 6023 5642 103 na GCF_000291035.1 PRJNA224116 SAMN02596803 AHCR00000000.1 na 1053171 1396 Bacillus cereus BAG1X1-2 strain=BAG1X1-2 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG1X1-2_G13151_V1 Broad Institute GCA_000291035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/035/GCF_000291035.1_Baci_cere_BAG1X1-2_G13151_V1/ na na na haploid bacteria 5856198 5849298 35.000000 0 10 79 NCBI RefSeq GCF_000291035.1-RS_2026_04_18 2026-04-18 6017 5729 89 na GCF_000291075.1 PRJNA224116 SAMN02596838 AHEA00000000.1 na 1053206 1396 Bacillus cereus HuA4-10 strain=HuA4-10 na latest Scaffold Major Full 2012-08-21 Baci_cere_HuA4-10_V1 Broad Institute GCA_000291075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/075/GCF_000291075.1_Baci_cere_HuA4-10_V1/ na na na haploid bacteria 5803300 5761566 35.000000 0 8 62 NCBI RefSeq GCF_000291075.1-RS_2025_08_25 2025-08-25 5999 5598 116 na GCF_000291135.1 PRJNA224116 SAMN02596848 AHEK00000000.1 na 1053216 1396 Bacillus cereus ISP3191 strain=ISP3191 na latest Scaffold Major Full 2012-08-21 Baci_cere_ISP3191_V1 Broad Institute GCA_000291135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/135/GCF_000291135.1_Baci_cere_ISP3191_V1/ na na na haploid bacteria 5371123 5309183 35.000000 0 4 44 NCBI RefSeq GCF_000291135.1-RS_2025_08_25 2025-08-25 5550 5284 92 na GCF_000291155.1 PRJNA224116 SAMN02596851 AHEN00000000.1 na 1053219 1396 Bacillus cereus MC67 strain=MC67 na latest Scaffold Major Full 2012-08-21 Baci_cere_MC67_V1 Broad Institute GCA_000291155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/155/GCF_000291155.1_Baci_cere_MC67_V1/ na na na haploid bacteria 5909232 5702115 35.500000 0 7 80 NCBI RefSeq GCF_000291155.1-RS_2025_08_25 2025-08-25 5923 5452 103 na GCF_000291195.1 PRJNA224116 SAMN02596852 AHEO00000000.1 na 1053220 1396 Bacillus cereus MSX-A1 strain=MSX-A1 na latest Scaffold Major Full 2012-08-21 Baci_cere_MSX-A1_V1 Broad Institute GCA_000291195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/195/GCF_000291195.1_Baci_cere_MSX-A1_V1/ na na na haploid bacteria 6066700 5981055 35.000000 0 9 91 NCBI RefSeq GCF_000291195.1-RS_2025_08_14 2025-08-14 6230 5818 114 na GCF_000291215.1 PRJNA224116 SAMN02596857 AHET00000000.1 na 1053225 1396 Bacillus cereus VD045 strain=VD045 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD045_V1 Broad Institute GCA_000291215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/215/GCF_000291215.1_Baci_cere_VD045_V1/ na na na haploid bacteria 6514282 6466674 34.500000 0 17 80 NCBI RefSeq GCF_000291215.1-RS_2026_06_22 2026-06-22 6638 6239 112 na GCF_000291255.1 PRJNA224116 SAMN02596855 AHER00000000.1 na 1053223 1396 Bacillus cereus VD014 strain=VD014 na latest Scaffold Major Full 2012-08-21 Baci_cere_VD014_V1 Broad Institute GCA_000291255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/255/GCF_000291255.1_Baci_cere_VD014_V1/ na na na haploid bacteria 6204183 6129787 34.500000 0 4 66 NCBI RefSeq GCF_000291255.1-RS_2025_06_04 2025-06-04 6223 5797 92 na GCF_000291295.1 PRJNA224116 SAMN02596821 AHDJ00000000.1 na 1053189 1396 Bacillus cereus BAG5X1-1 strain=BAG5X1-1 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG5X1-1_V1 Broad Institute GCA_000291295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/295/GCF_000291295.1_Baci_cere_BAG5X1-1_V1/ na na na haploid bacteria 5635174 5540116 35.000000 0 15 85 NCBI RefSeq GCF_000291295.1-RS_2025_08_25 2025-08-25 5718 5341 101 na GCF_000291415.1 PRJNA224116 SAMN02596818 AHDG00000000.1 na 1053186 1396 Bacillus cereus BAG4X12-1 strain=BAG4X12-1 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG4X12-1_G13198_V1 Broad Institute GCA_000291415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/415/GCF_000291415.1_Baci_cere_BAG4X12-1_G13198_V1/ na na na haploid bacteria 5825595 5784472 35.000000 0 17 65 NCBI RefSeq GCF_000291415.1-RS_2026_04_19 2026-04-19 5941 5611 108 na GCF_000291435.1 PRJNA224116 SAMN02596817 AHDF00000000.1 na 1053185 1396 Bacillus cereus BAG4O-1 strain=BAG4O-1 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG4O-1_G13205_V1 Broad Institute GCA_000291435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/435/GCF_000291435.1_Baci_cere_BAG4O-1_G13205_V1/ na na na haploid bacteria 5726356 5634333 35.000000 0 3 63 NCBI RefSeq GCF_000291435.1-RS_2026_04_15 2026-04-15 5737 5465 83 na GCF_000291455.1 PRJNA224116 SAMN02596816 AHDE00000000.1 na 1053184 1396 Bacillus cereus BAG3X2-2 strain=BAG3X2-2 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG3X2-2_G13194_V1 Broad Institute GCA_000291455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/455/GCF_000291455.1_Baci_cere_BAG3X2-2_G13194_V1/ na na na haploid bacteria 5865692 5777232 35.000000 0 7 60 NCBI RefSeq GCF_000291455.1-RS_2026_05_30 2026-05-30 5987 5624 102 na GCF_000291515.1 PRJNA224116 SAMN02596813 AHDB00000000.1 na 1053181 1396 Bacillus cereus BAG2X1-3 strain=BAG2X1-3 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG2X1-3_G13211_V1 Broad Institute GCA_000291515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/515/GCF_000291515.1_Baci_cere_BAG2X1-3_G13211_V1/ na na na haploid bacteria 5250571 5191991 35.500000 0 9 88 NCBI RefSeq GCF_000291515.1-RS_2025_08_25 2025-08-25 5549 5153 101 na GCF_000291535.1 PRJNA224116 SAMN02596814 AHDC00000000.1 na 1053182 1396 Bacillus cereus BAG3O-2 strain=BAG3O-2 na latest Scaffold Major Full 2012-08-21 Baci_cere_BAG3O-2_G13191_V1 Broad Institute GCA_000291535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/535/GCF_000291535.1_Baci_cere_BAG3O-2_G13191_V1/ na na na haploid bacteria 5856021 5765165 35.000000 0 11 67 NCBI RefSeq GCF_000291535.1-RS_2026_04_18 2026-04-18 5929 5643 91 na GCF_000291585.1 PRJNA224116 SAMN01084069 AKXO00000000.1 na 1178526 1311 Streptococcus agalactiae GB00112 strain=GB00112 na latest Contig Major Full 2012-08-17 ASM29158v1 MSU GCA_000291585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/585/GCF_000291585.1_ASM29158v1/ na na na haploid bacteria 2033051 2033051 35.000000 0 56 56 NCBI RefSeq GCF_000291585.1-RS_2026_01_04 2026-01-04 2045 1906 46 23045509 GCF_000291605.1 PRJNA224116 SAMN02469638 ALBZ00000000.1 na 1077143 747 Pasteurella multocida subsp. multocida str. P52VAC strain=P52VAC na latest Contig Major Full 2012-08-17 ASM29160v1 Anand Agricultural University GCA_000291605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/605/GCF_000291605.1_ASM29160v1/ na na na haploid bacteria 2273366 2273366 40.500000 0 209 209 NCBI RefSeq GCF_000291605.1-RS_2026_04_15 2026-04-15 2281 2064 75 na GCF_000291685.1 PRJNA224116 SAMN02470074 ALOE00000000.1 na 1202962 90736 Moritella marina ATCC 15381 strain=ATCC 15381 na latest Contig Major Full 2012-08-17 ASM29168v1 Iowa State University GCA_000291685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/685/GCF_000291685.1_ASM29168v1/ na assembly from type material na haploid bacteria 4636177 4636177 40.500000 0 83 83 NCBI RefSeq GCF_000291685.1-RS_2026_03_31 2026-03-31 4146 4080 30 23105048 GCF_000291725.1 PRJNA224116 SAMN02471791 AKVS00000000.1 na 1175631 55208 Pectobacterium wasabiae CFBP 3304 strain=CFBP 3304 na latest Contig Major Full 2012-08-17 PecWas1.0 University of Helsinki GCA_000291725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/725/GCF_000291725.1_PecWas1.0/ na assembly from type material na haploid bacteria 5149301 5149301 50.500000 0 73 73 NCBI RefSeq GCF_000291725.1-RS_2026_03_30 2026-03-30 4759 4562 93 23133391 GCF_000291745.1 PRJNA224116 SAMD00036585 BADP00000000.1 na 1078464 287 Pseudomonas aeruginosa NCMG1179 strain=NCGM1179 na latest Scaffold Major Full 2011-09-09 ASM29174v1 National Center for Global Health and Medicine GCA_000291745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/745/GCF_000291745.1_ASM29174v1/ na na na haploid bacteria 7059701 6735052 66.000000 0 92 290 NCBI RefSeq GCF_000291745.1-RS_2025_07_20 2025-07-20 6493 6247 67 22038962 GCF_000291765.1 PRJNA224116 SAMD00036586 BADQ00000000.1 na 1078763 1773 Mycobacterium tuberculosis NCGM2209 strain=NCGM2209 na latest Scaffold Major Full 2011-11-25 ASM29176v1 National Center for Global Health and Medicine GCA_000291765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/765/GCF_000291765.1_ASM29176v1/ na na na haploid bacteria 4518959 4280431 65.500000 0 107 317 NCBI RefSeq GCF_000291765.1-RS_2025_09_17 2025-09-17 4288 3934 51 22072647 GCF_000292005.1 PRJNA224116 SAMN02469342 ALOK00000000.2 na 1210444 29461 Brucella suis bv. 1 str. BCB025 strain=BCB025 na latest Contig Major Full 2012-09-28 ASM29200v2 Beijing Institute of Disease Control and Prevention GCA_000292005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/005/GCF_000292005.1_ASM29200v2/ na na na haploid bacteria 3286550 3286550 57.500000 0 290 290 NCBI RefSeq GCF_000292005.1-RS_2025_08_08 2025-08-08 3290 3091 49 23209218 GCF_000292025.1 PRJNA224116 SAMN02469347 ALOP00000000.2 na 1210450 235 Brucella abortus bv. 2 str. BCB034 strain=BCB034 na latest Contig Major Full 2012-09-28 ASM29202v2 Beijing Institute of Disease Control and Prevention GCA_000292025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/025/GCF_000292025.1_ASM29202v2/ na na na haploid bacteria 3257978 3257978 57.500000 0 149 149 NCBI RefSeq GCF_000292025.1-RS_2026_05_17 2026-05-17 3236 3004 52 23209208 GCF_000292045.1 PRJNA224116 SAMN02469340 ALOQ00000000.1 na 1210454 235 Brucella abortus 104M strain=104M na latest Contig Major Full 2012-08-20 ASM29204v1 Beijing Institute of Disease Control and Prevention GCA_000292045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/045/GCF_000292045.1_ASM29204v1/ na na na haploid bacteria 3287273 3287273 57.500000 0 97 97 NCBI RefSeq GCF_000292045.1-RS_2025_06_12 2025-06-12 3209 3022 54 23045513 GCF_000292065.1 PRJNA224116 SAMN02469338 ALOR00000000.1 na 1210452 29459 Brucella melitensis M5-10 strain=M5-10 na latest Contig Major Full 2012-08-20 ASM29206v1 Beijing Institute of Disease Control and Prevention GCA_000292065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/065/GCF_000292065.1_ASM29206v1/ na na na haploid bacteria 3282791 3282791 57.500000 0 81 81 NCBI RefSeq GCF_000292065.1-RS_2026_04_26 2026-04-26 3230 3008 54 23045513 GCF_000292085.1 PRJNA224116 SAMN02469345 ALOO00000000.2 na 1210449 29459 Brucella melitensis bv. 1 str. BCB033 strain=BCB033 na latest Contig Major Full 2012-09-28 ASM29208v2 Beijing Institute of Disease Control and Prevention GCA_000292085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/085/GCF_000292085.1_ASM29208v2/ na na na haploid bacteria 3266259 3266259 57.500000 0 164 164 NCBI RefSeq GCF_000292085.1-RS_2026_05_01 2026-05-01 3213 2980 52 na GCF_000292105.1 PRJNA224116 SAMN02469346 ALON00000000.2 na 1210448 29461 Brucella suis bv. 2 str. BCB032 strain=BCB032 na latest Contig Major Full 2012-09-28 ASM29210v2 Beijing Institute of Disease Control and Prevention GCA_000292105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/105/GCF_000292105.1_ASM29210v2/ na na na haploid bacteria 3276782 3276782 57.500000 0 271 271 NCBI RefSeq GCF_000292105.1-RS_2025_08_08 2025-08-08 3285 3089 50 na GCF_000292125.1 PRJNA224116 SAMN02469344 ALOS00000000.1 na 1210453 29461 Brucella suis S2-30 strain=S2-30 na latest Contig Major Full 2012-08-20 ASM29212v1 Beijing Institute of Disease Control and Prevention GCA_000292125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/125/GCF_000292125.1_ASM29212v1/ na na na haploid bacteria 3270017 3270017 57.000000 0 86 86 NCBI RefSeq GCF_000292125.1-RS_2026_05_15 2026-05-15 3216 2980 53 23045513 GCF_000292145.1 PRJNA224116 SAMN02469343 ALOL00000000.2 na 1210446 235 Brucella abortus bv. 1 str. BCB027 strain=BCB027 na latest Contig Major Full 2012-09-28 ASM29214v2 Beijing Institute of Disease Control and Prevention GCA_000292145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/145/GCF_000292145.1_ASM29214v2/ na na na haploid bacteria 3240915 3240915 57.500000 0 292 292 NCBI RefSeq GCF_000292145.1-RS_2026_04_26 2026-04-26 3278 3052 50 23405292 GCF_000292165.1 PRJNA224116 SAMN02469337 ALOM00000000.2 na 1210447 29459 Brucella melitensis bv. 1 str. BCB028 strain=BCB028 na latest Contig Major Full 2012-09-28 ASM29216v2 Beijing Institute of Disease Control and Prevention GCA_000292165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/165/GCF_000292165.1_ASM29216v2/ na na na haploid bacteria 3286398 3286398 57.500000 0 127 127 NCBI RefSeq GCF_000292165.1-RS_2026_04_26 2026-04-26 3235 3013 51 na GCF_000292185.1 PRJNA224116 SAMN02469336 ALOJ00000000.2 na 1210445 36855 Brucella canis BCB018 strain=BCB018 na latest Contig Major Full 2012-09-27 ASM29218v2 Beijing Institute of Disease Control and Prevention GCA_000292185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/185/GCF_000292185.1_ASM29218v2/ na na na haploid bacteria 3247324 3247324 57.500000 0 170 170 NCBI RefSeq GCF_000292185.1-RS_2025_08_08 2025-08-08 3187 2989 51 23144429 GCF_000292205.1 PRJNA224116 SAMN02469333 ALOI00000000.2 na 1210451 235 Brucella abortus bv. 1 str. BCB013 strain=BCB013 na latest Contig Major Full 2012-09-28 V02 for genome sequence of BCB013 Beijing Institute of Disease Control and Prevention GCA_000292205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/205/GCF_000292205.1_V02_for_genome_sequence_of_BCB013/ na na na haploid bacteria 3273508 3273508 57.500000 0 297 297 NCBI RefSeq GCF_000292205.1-RS_2025_06_12 2025-06-12 3296 3068 48 na GCF_000292225.1 PRJNA224116 SAMN02471852 ALOX00000000.1 na 1217720 1217720 Roseomonas sp. B5 strain=B5 na latest Contig Major Full 2012-08-20 ASM29222v1 University of Malaya GCA_000292225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/225/GCF_000292225.1_ASM29222v1/ na na na haploid bacteria 4719255 4719255 70.500000 0 228 228 NCBI RefSeq GCF_000292225.1-RS_2024_12_15 2024-12-15 4408 4257 58 23144419 GCF_000292245.2 PRJNA224116 SAMN02470564 ALPT00000000.2 na 1218173 1445 Alkalihalobacillus alcalophilus ATCC 27647 = CGMCC 1.3604 strain=AV1934 na latest Contig Major Full 2014-09-17 ASM29224v2 Mount Sinai School of Medicine GCA_000292245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/245/GCF_000292245.2_ASM29224v2/ na assembly from type material na haploid bacteria 4370295 4370295 37.500000 0 182 182 NCBI RefSeq GCF_000292245.2-RS_2026_01_24 2026-01-24 4346 4129 93 25395643 GCF_000292265.1 PRJNA224116 SAMN02471866 ALOY00000000.1 na 1217721 231455 Dyella japonica A8 strain=A8 na latest Contig Major Full 2012-08-20 ASM29226v1 University of Malaya GCA_000292265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/265/GCF_000292265.1_ASM29226v1/ na na na haploid bacteria 4769238 4769238 65.000000 0 184 184 NCBI RefSeq GCF_000292265.1-RS_2025_05_24 2025-05-24 4198 4121 55 23105069 GCF_000292285.1 PRJNA224116 SAMN02471844 ALPA00000000.1 na 1217722 1217722 Pseudomonas sp. S13.1.2 strain=S13.1.2 na latest Contig Major Full 2012-08-20 ASM29228v1 University of Malaya GCA_000292285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/285/GCF_000292285.1_ASM29228v1/ na na na haploid bacteria 4955852 4955852 62.000000 0 337 337 NCBI RefSeq GCF_000292285.1-RS_2024_08_21 2024-08-21 4714 4543 62 na GCF_000292325.1 PRJNA224116 SAMN02471851 ALOT00000000.1 na 1216961 1216961 Aeromonas sp. 159 strain=159 na latest Contig Major Full 2012-08-20 ASM29232v1 UNIVERSITY OF MALAYA GCA_000292325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/325/GCF_000292325.1_ASM29232v1/ na na na haploid bacteria 3360845 3360845 58.000000 0 125 125 NCBI RefSeq GCF_000292325.1-RS_2025_08_27 2025-08-27 3225 3112 52 23105081 GCF_000292345.1 PRJNA224116 SAMN02471864 ALOU00000000.1 na 1217718 1217718 Cupriavidus sp. BIS7 strain=BIS7 na latest Contig Major Full 2012-08-20 ASM29234v1 University of Malaya GCA_000292345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/345/GCF_000292345.1_ASM29234v1/ na na na haploid bacteria 5871420 5871420 64.000000 0 138 138 NCBI RefSeq GCF_000292345.1-RS_2024_06_04 2024-06-04 5353 5250 60 23115161 GCF_000292385.1 PRJNA224116 SAMN02471865 ALOW00000000.1 na 651305 651305 Acinetobacter sp. GG2 strain=GG2 na latest Contig Major Full 2012-08-20 ASM29238v1 University of Malaya GCA_000292385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/385/GCF_000292385.1_ASM29238v1/ na na na haploid bacteria 3873115 3873115 38.500000 0 40 40 NCBI RefSeq GCF_000292385.1-RS_2025_01_31 2025-01-31 3645 3511 56 23105061 GCF_000292405.1 PRJNA224116 SAMN02603571 na na 663918 2097 Mycoplasmoides genitalium M2321 strain=M2321 na latest Complete Genome Major Full 2012-08-21 ASM29240v1 Louisiana State University Health Sciences Center GCA_000292405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/405/GCF_000292405.1_ASM29240v1/ na na na haploid bacteria 579977 579977 31.500000 1 1 1 NCBI RefSeq GCF_000292405.1-RS_2026_02_16 2026-02-16 576 494 42 23045512 GCF_000292455.1 PRJNA224116 SAMN02603565 na na 1218175 1428 Bacillus thuringiensis HD-771 strain=HD-771 na latest Complete Genome Major Full 2012-08-21 ASM29245v1 Los Alamos National Laboratory GCA_000292455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/455/GCF_000292455.1_ASM29245v1/ na na na haploid bacteria 6438373 6438373 35.000000 9 9 9 NCBI RefSeq GCF_000292455.1-RS_2025_08_25 2025-08-25 6747 6361 140 na GCF_000292505.1 PRJNA224116 SAMN02603574 na na 662947 2097 Mycoplasmoides genitalium M2288 strain=M2288 na latest Complete Genome Major Full 2012-08-21 ASM29250v1 LSU Health Sciences Center GCA_000292505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/505/GCF_000292505.1_ASM29250v1/ na na na haploid bacteria 579558 579558 31.500000 1 1 1 NCBI RefSeq GCF_000292505.1-RS_2026_02_27 2026-02-27 574 499 42 23045512 GCF_000292525.1 PRJNA224116 SAMN02469421 AEYF00000000.1 na 1132836 1132836 Rhizobium sp. CCGE 510 strain=CCGE 510 na latest Contig Major Full 2012-08-21 ASM29252v1 Universidad Nacional Autonoma de Mex GCA_000292525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/525/GCF_000292525.1_ASM29252v1/ na na na haploid bacteria 6916614 6916614 61.000000 0 142 142 NCBI RefSeq GCF_000292525.1-RS_2024_05_19 2024-05-19 6701 6353 51 23105056 GCF_000292545.1 PRJNA224116 SAMN02469339 ALOH00000000.1 na 1210907 470 Acinetobacter baumannii BZICU-2 strain=BZICU-2 na latest Contig Major Full 2012-08-21 ASM29254v1 Beijing Institute of Disease Control and Prevention GCA_000292545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/545/GCF_000292545.1_ASM29254v1/ na na na haploid bacteria 3814309 3814309 39.000000 0 184 184 NCBI RefSeq GCF_000292545.1-RS_2026_02_10 2026-02-10 3686 3514 25 23045506 GCF_000292625.1 PRJNA721985 SAMN02981302 AEUS00000000.1 reference genome 1858805 1858805 Dacryopinax primogenitus strain=DJM-731 SS1 na latest Scaffold Major Full 2012-08-23 Dacryopinax sp. DJM 731 SSP1 v1.0 DOE Joint Genome Institute GCA_000292625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/625/GCF_000292625.1_Dacryopinax_sp._DJM_731_SSP1_v1.0/ na assembly from type material na haploid fungi 29503487 27600925 52.000000 0 99 965 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2021-04-21 10298 10237 59 22745431 GCF_000292685.1 PRJNA224116 SAMN02604336 na reference genome 1206109 91844 Candidatus Portiera aleyrodidarum BT-B-HRs strain=BT-B na latest Complete Genome Major Full 2012-08-22 ASM29268v1 Yale University GCA_000292685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/685/GCF_000292685.1_ASM29268v1/ na na na haploid bacteria 358242 358242 26.000000 1 1 1 NCBI RefSeq GCF_000292685.1-RS_2025_12_13 2025-12-13 296 251 38 22977066 GCF_000292705.1 PRJNA224116 SAMN02603564 na na 1217737 1428 Bacillus thuringiensis HD-789 strain=HD-789 na latest Complete Genome Major Full 2012-08-22 ASM29270v1 Los Alamos National Laboratory GCA_000292705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/705/GCF_000292705.1_ASM29270v1/ na na na haploid bacteria 6334630 6334630 35.000000 7 7 7 NCBI RefSeq GCF_000292705.1-RS_2025_05_25 2025-05-25 6683 6309 169 24309743 GCF_000292755.1 PRJNA224116 SAMN02415265 AJTU00000000.1 na 1141101 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. ST1660/06 strain=ST1660/06 na latest Contig Major Full 2012-08-23 ASM29275v1 The Chinese University of Hong Kong GCA_000292755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/755/GCF_000292755.1_ASM29275v1/ na na na haploid bacteria 5026150 5026150 52.000000 0 8 8 NCBI RefSeq GCF_000292755.1-RS_2025_04_15 2025-04-15 4947 4675 112 23105062 GCF_000292795.1 PRJNA224116 SAMN02471518 ALYL00000000.1 na 743713 294 Pseudomonas fluorescens R124 strain=R124 na latest Chromosome Major Full 2012-09-11 PF-R124.01 Northern Kentucky University GCA_000292795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/795/GCF_000292795.1_PF-R124.01/ na na na haploid bacteria 6300486 6265484 60.500000 2 2 78 NCBI RefSeq GCF_000292795.1-RS_2025_03_18 2025-03-18 5688 5522 82 na GCF_000292865.1 PRJNA224116 SAMN02470022 ALKO00000000.1 na 1100721 1100721 Limnohabitans sp. Rim47 strain=Rim47 na latest Contig Major Full 2012-08-24 ASM29286v1 Institute of Microbiology, Academy of Sciences, Czech Republic GCA_000292865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/865/GCF_000292865.1_ASM29286v1/ na na na haploid bacteria 3025865 3025865 58.500000 0 230 230 NCBI RefSeq GCF_000292865.1-RS_2024_08_01 2024-08-01 3043 2945 55 23105051 GCF_000292915.1 PRJNA224116 SAMN02604072 na na 1009846 292 Burkholderia cepacia GG4 strain=GG4 na latest Complete Genome Major Full 2012-08-27 ASM29291v1 U Malaya GCA_000292915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/915/GCF_000292915.1_ASM29291v1/ na na na haploid bacteria 6467321 6467321 66.500000 2 2 2 NCBI RefSeq GCF_000292915.1-RS_2025_03_22 2025-03-22 5979 5761 69 23105060 GCF_000292935.1 PRJNA224116 SAMN02469578 ALVD00000000.1 na 1216362 1583098 Fusobacterium hwasookii ChDC F128 strain=ChDC F128 na latest Contig Major Full 2012-08-27 ASM29293v1 Chosun University GCA_000292935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/935/GCF_000292935.1_ASM29293v1/ na assembly from type material na haploid bacteria 2361684 2361684 27.000000 0 30 30 NCBI RefSeq GCF_000292935.1-RS_2026_03_28 2026-03-28 2276 2184 53 23105064 GCF_000292955.1 PRJNA224116 SAMN00828796 ALNM00000000.1 na 936381 936381 Selenomonas sp. CM52 strain=CM52 na latest Contig Major Full 2012-08-27 SspCM52v1.0 J. Craig Venter Institute GCA_000292955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/955/GCF_000292955.1_SspCM52v1.0/ na na na haploid bacteria 2580752 2580752 57.000000 0 56 56 NCBI RefSeq GCF_000292955.1-RS_2024_08_13 2024-08-13 2457 2355 61 na GCF_000292975.1 PRJNA224116 SAMN00829140 ALKK00000000.1 na 1161424 859 Fusobacterium necrophorum subsp. funduliforme Fnf 1007 strain=Fnf 1007 na latest Contig Major Full 2012-08-27 FnecroFnf1007v1.0 JCVI GCA_000292975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/975/GCF_000292975.1_FnecroFnf1007v1.0/ na na na haploid bacteria 2166823 2166823 35.000000 0 87 87 NCBI RefSeq GCF_000292975.1-RS_2025_12_14 2025-12-14 2166 2097 38 na GCF_000292995.1 PRJNA224116 SAMN00792234 ALKJ00000000.1 na 1125723 712438 Porphyromonas sp. oral taxon 279 str. F0450 strain=F0450 na latest Contig Major Full 2012-08-27 Psp279F0450v1.0 J. Craig Venter Institute GCA_000292995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/292/995/GCF_000292995.1_Psp279F0450v1.0/ na na na haploid bacteria 2265201 2265201 55.500000 0 51 51 NCBI RefSeq GCF_000292995.1-RS_2025_01_08 2025-01-08 1777 1697 60 na GCF_000293015.1 PRJNA224116 SAMN00828797 ALNO00000000.1 na 1111137 1111137 Slackia sp. CM382 strain=CM382 na latest Contig Major Full 2012-08-27 SspCM382v1.0 J. Craig Venter Institute GCA_000293015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/015/GCF_000293015.1_SspCM382v1.0/ na na na haploid bacteria 2051910 2051910 62.000000 0 25 25 NCBI RefSeq GCF_000293015.1-RS_2024_08_13 2024-08-13 1741 1678 53 na GCF_000293055.1 PRJNA224116 SAMN02415223 ALPO00000000.1 na 1212557 28901 Salmonella enterica subsp. enterica serovar Hartford str. 06-0676 strain=06-0676 na latest Contig Major Full 2012-08-27 ASM29305v1 Centers for Disease Control & Prevention GCA_000293055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/055/GCF_000293055.1_ASM29305v1/ na na na haploid bacteria 4785841 4785841 52.000000 0 47 47 NCBI RefSeq GCF_000293055.1-RS_2025_03_19 2025-03-19 4670 4422 87 na GCF_000293075.1 PRJNA224116 SAMN02415222 ALPN00000000.1 na 1212554 28901 Salmonella enterica subsp. enterica serovar Bareilly str. 06-0784 strain=06-0784 na latest Scaffold Major Full 2012-08-27 ASM29307v1 Centers for Disease Control & Prevention GCA_000293075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/075/GCF_000293075.1_ASM29307v1/ na na na haploid bacteria 4712536 4712525 52.000000 0 102 103 NCBI RefSeq GCF_000293075.1-RS_2025_03_19 2025-03-19 4633 4302 85 na GCF_000293095.1 PRJNA224116 SAMN02415224 ALPP00000000.1 na 1212559 28901 Salmonella enterica subsp. enterica serovar Hadar str. 2011K-0112 strain=2011K-0112 na latest Contig Major Full 2012-08-27 ASM29309v1 Centers for Disease Control & Prevention GCA_000293095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/095/GCF_000293095.1_ASM29309v1/ na na na haploid bacteria 4683270 4683270 52.000000 0 54 54 NCBI RefSeq GCF_000293095.1-RS_2025_03_19 2025-03-19 4548 4297 89 na GCF_000293115.1 PRJNA224116 SAMN02415225 ALPQ00000000.1 na 1212561 28901 Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406 strain=2010K-1406 na latest Contig Major Full 2012-08-27 ASM29311v1 Centers for Disease Control & Prevention GCA_000293115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/115/GCF_000293115.1_ASM29311v1/ na na na haploid bacteria 4822339 4822339 52.000000 0 142 142 NCBI RefSeq GCF_000293115.1-RS_2025_08_14 2025-08-14 4836 4403 97 na GCF_000293135.1 PRJNA224116 SAMN00828785 ALNJ00000000.1 na 936565 936565 Klebsiella sp. OBRC7 strain=OBRC7 na latest Contig Major Full 2012-08-27 KspOBRC7v1.0 J. Craig Venter Institute GCA_000293135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/135/GCF_000293135.1_KspOBRC7v1.0/ na na na haploid bacteria 6343309 6343309 55.000000 0 158 158 NCBI RefSeq GCF_000293135.1-RS_2025_01_31 2025-01-31 6256 5982 82 na GCF_000293155.1 PRJNA224116 SAMN00828794 ALNL00000000.1 na 936375 936375 Mogibacterium sp. CM50 strain=CM50 na latest Contig Major Full 2012-08-27 MspCM50v1.0 J. Craig Venter Institute GCA_000293155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/155/GCF_000293155.1_MspCM50v1.0/ na na na haploid bacteria 1888523 1888523 44.000000 0 44 44 NCBI RefSeq GCF_000293155.1-RS_2025_08_25 2025-08-25 1793 1711 49 na GCF_000293175.1 PRJNA224116 SAMN00828795 ALNN00000000.1 na 936370 936370 Capnocytophaga sp. CM59 strain=CM59 na latest Contig Major Full 2012-08-27 CspCM59v1.0 J. Craig Venter Institute GCA_000293175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/175/GCF_000293175.1_CspCM59v1.0/ na na na haploid bacteria 2785060 2785060 41.500000 0 75 75 NCBI RefSeq GCF_000293175.1-RS_2024_08_13 2024-08-13 2626 2528 49 na GCF_000293195.2 PRJNA224116 SAMN02470208 ALVC00000000.1 na 473781 473781 Sphingomonas sp. LH128 strain=LH128 na latest Contig Major Full 2012-11-30 ASM29319v2 KuLeuven GCA_000293195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/195/GCF_000293195.2_ASM29319v2/ na na na haploid bacteria 6457516 6457516 65.000000 0 658 658 NCBI RefSeq GCF_000293195.2-RS_2025_08_24 2025-08-24 6501 6162 61 24657861 GCF_000293215.1 PRJNA296794 SAMN02981437 ALBS00000000.1 reference genome 1186058 82508 Trichosporon asahii var. asahii CBS 2479 strain=CBS 2479 na latest Scaffold Major Full 2013-01-23 Trichosporon asahii 1 Beijing Military Command General Hospital of PLA, China GCA_000293215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/215/GCF_000293215.1_Trichosporon_asahii_1/ na assembly from type material na haploid fungi 24507743 24271266 59.500000 0 77 341 Beijing Military Command General Hospital of PLA, China Annotation submitted by Beijing Military Command General Hospital of PLA, China 2024-01-02 8834 8311 523 14641628;23104369 GCF_000293245.1 PRJNA224116 SAMN00849775 ALXN00000000.1 na 1069609 487 Neisseria meningitidis 93004 strain=93004 na latest Contig Major Full 2012-08-27 ASM29324v1 Institute for Genome Sciences GCA_000293245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/245/GCF_000293245.1_ASM29324v1/ na na na haploid bacteria 2336390 2336390 51.500000 0 44 44 NCBI RefSeq GCF_000293245.1-RS_2026_02_17 2026-02-17 2336 2028 95 na GCF_000293265.1 PRJNA224116 SAMN00849774 ALXM00000000.1 na 1069608 487 Neisseria meningitidis 93003 strain=93003 na latest Contig Major Full 2012-08-27 ASM29326v1 Institute for Genome Sciences GCA_000293265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/265/GCF_000293265.1_ASM29326v1/ na na na haploid bacteria 2238953 2238953 51.500000 0 24 24 NCBI RefSeq GCF_000293265.1-RS_2026_02_17 2026-02-17 2258 1967 91 na GCF_000293285.1 PRJNA224116 SAMN00849781 ALXO00000000.1 na 1069610 487 Neisseria meningitidis NM255 strain=NM255 na latest Contig Major Full 2012-08-27 ASM29328v1 Institute for Genome Sciences GCA_000293285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/285/GCF_000293285.1_ASM29328v1/ na na na haploid bacteria 2196372 2196372 51.500000 0 29 29 NCBI RefSeq GCF_000293285.1-RS_2025_02_17 2025-02-17 2257 1986 90 na GCF_000293305.1 PRJNA224116 SAMN00849779 ALXP00000000.1 na 1069611 487 Neisseria meningitidis NM140 strain=NM140 na latest Contig Major Full 2012-08-27 ASM29330v1 Institute for Genome Sciences GCA_000293305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/305/GCF_000293305.1_ASM29330v1/ na na na haploid bacteria 2164766 2164766 51.500000 0 31 31 NCBI RefSeq GCF_000293305.1-RS_2025_02_17 2025-02-17 2192 1914 75 na GCF_000293325.1 PRJNA224116 SAMN00849780 ALXQ00000000.1 na 1069612 487 Neisseria meningitidis NM183 strain=NM183 na latest Contig Major Full 2012-08-27 ASM29332v1 Institute for Genome Sciences GCA_000293325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/325/GCF_000293325.1_ASM29332v1/ na na na haploid bacteria 2189086 2189086 51.500000 0 27 27 NCBI RefSeq GCF_000293325.1-RS_2025_02_17 2025-02-17 2202 1914 95 na GCF_000293345.1 PRJNA224116 SAMN00849786 ALXR00000000.1 na 1069613 487 Neisseria meningitidis NM2781 strain=NM2781 na latest Contig Major Full 2012-08-27 ASM29334v1 Institute for Genome Sciences GCA_000293345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/345/GCF_000293345.1_ASM29334v1/ na na na haploid bacteria 2169720 2169720 51.500000 0 20 20 NCBI RefSeq GCF_000293345.1-RS_2025_02_17 2025-02-17 2177 1882 93 na GCF_000293365.1 PRJNA224116 SAMN00849763 ALXS00000000.1 na 1069614 487 Neisseria meningitidis 69166 strain=69166 na latest Contig Major Full 2012-08-27 ASM29336v1 Institute for Genome Sciences GCA_000293365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/365/GCF_000293365.1_ASM29336v1/ na na na haploid bacteria 2218697 2218697 51.500000 0 25 25 NCBI RefSeq GCF_000293365.1-RS_2026_02_17 2026-02-17 2277 1993 84 na GCF_000293385.1 PRJNA224116 SAMN00849791 ALXT00000000.1 na 1069615 487 Neisseria meningitidis NM576 strain=NM576 na latest Contig Major Full 2012-08-27 ASM29338v1 Institute for Genome Sciences GCA_000293385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/385/GCF_000293385.1_ASM29338v1/ na na na haploid bacteria 2189753 2189753 51.500000 0 27 27 NCBI RefSeq GCF_000293385.1-RS_2026_01_07 2026-01-07 2254 1969 95 na GCF_000293405.2 PRJNA224116 SAMN00849778 ALXU00000000.1 na 1069616 487 Neisseria meningitidis 98008 strain=98008 na latest Contig Major Full 2012-08-27 ASM29340v2 Institute for Genome Sciences GCA_000293405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/405/GCF_000293405.2_ASM29340v2/ na na na haploid bacteria 2303884 2303884 51.500000 0 36 36 NCBI RefSeq GCF_000293405.2-RS_2026_02_17 2026-02-17 2345 2028 90 na GCF_000293425.1 PRJNA224116 SAMN00849764 ALXV00000000.1 na 1069617 487 Neisseria meningitidis 80179 strain=80179 na latest Contig Major Full 2012-08-27 ASM29342v1 Institute for Genome Sciences GCA_000293425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/425/GCF_000293425.1_ASM29342v1/ na na na haploid bacteria 2187718 2187718 51.500000 0 31 31 NCBI RefSeq GCF_000293425.1-RS_2026_02_17 2026-02-17 2234 1962 90 na GCF_000293445.1 PRJNA224116 SAMN00849773 ALXW00000000.1 na 1069618 487 Neisseria meningitidis 92045 strain=92045 na latest Contig Major Full 2012-08-27 ASM29344v1 Institute for Genome Sciences GCA_000293445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/445/GCF_000293445.1_ASM29344v1/ na na na haploid bacteria 2223920 2223920 51.500000 0 25 25 NCBI RefSeq GCF_000293445.1-RS_2026_02_17 2026-02-17 2280 1996 95 na GCF_000293465.1 PRJNA224116 SAMN00849784 ALXX00000000.1 na 1069619 487 Neisseria meningitidis NM2657 strain=NM2657 na latest Contig Major Full 2012-08-27 ASM29346v1 Institute for Genome Sciences GCA_000293465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/465/GCF_000293465.1_ASM29346v1/ na na na haploid bacteria 2154485 2154485 51.500000 0 30 30 NCBI RefSeq GCF_000293465.1-RS_2025_02_17 2025-02-17 2187 1917 94 na GCF_000293545.1 PRJNA224116 SAMN02596825 AHDN00000000.1 na 1053193 1396 Bacillus cereus BAG6O-2 strain=BAG6O-2 na latest Scaffold Major Full 2012-08-29 Baci_cere_BAG60-2_G13207_V1 Broad Institute GCA_000293545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/545/GCF_000293545.1_Baci_cere_BAG60-2_G13207_V1/ na na na haploid bacteria 5747228 5718373 35.000000 0 9 90 NCBI RefSeq GCF_000293545.1-RS_2025_08_25 2025-08-25 6000 5595 66 na GCF_000293625.1 PRJNA224116 SAMN00849787 ALXY00000000.1 na 1069620 487 Neisseria meningitidis NM2795 strain=NM2795 na latest Contig Major Full 2012-08-27 ASM29362v1 Institute for Genome Sciences GCA_000293625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/625/GCF_000293625.1_ASM29362v1/ na na na haploid bacteria 2154992 2154992 52.000000 0 25 25 NCBI RefSeq GCF_000293625.1-RS_2025_02_17 2025-02-17 2179 1917 90 na GCF_000293645.1 PRJNA224116 SAMN00849790 ALXZ00000000.1 na 1069621 487 Neisseria meningitidis NM3081 strain=NM3081 na latest Contig Major Full 2012-08-27 ASM29364v1 Institute for Genome Sciences GCA_000293645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/645/GCF_000293645.1_ASM29364v1/ na na na haploid bacteria 2346626 2346626 51.500000 0 57 57 NCBI RefSeq GCF_000293645.1-RS_2026_01_11 2026-01-11 2452 2126 90 na GCF_000293665.1 PRJNA224116 SAMN00849789 ALYA00000000.1 na 1069622 487 Neisseria meningitidis NM3001 strain=NM3001 na latest Contig Major Full 2012-08-27 ASM29366v1 Institute for Genome Sciences GCA_000293665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/665/GCF_000293665.1_ASM29366v1/ na na na haploid bacteria 2152485 2152485 51.500000 0 29 29 NCBI RefSeq GCF_000293665.1-RS_2025_02_17 2025-02-17 2161 1869 90 na GCF_000293685.1 PRJNA224116 SAMN02596832 AHDU00000000.1 na 1053200 1396 Bacillus cereus HD73 strain=HD73 na latest Scaffold Major Full 2012-08-29 Baci_cere_HD73_V1 Broad Institute GCA_000293685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/685/GCF_000293685.1_Baci_cere_HD73_V1/ na na na haploid bacteria 5879192 5772127 35.000000 0 22 114 NCBI RefSeq GCF_000293685.1-RS_2026_05_30 2026-05-30 6104 5715 111 na GCF_000293705.1 PRJNA224116 SAMN02596833 AHDV00000000.1 na 1053201 1396 Bacillus cereus HuA2-1 strain=HuA2-1 na latest Scaffold Major Full 2012-08-29 Baci_cere_HuA2-1_V1 Broad Institute GCA_000293705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/705/GCF_000293705.1_Baci_cere_HuA2-1_V1/ na na na haploid bacteria 6465275 6396969 35.000000 0 11 71 NCBI RefSeq GCF_000293705.1-RS_2025_08_25 2025-08-25 6543 6105 121 na GCF_000293725.1 PRJNA224116 SAMN02596839 AHEB00000000.1 na 1053207 1396 Bacillus cereus HuB1-1 strain=HuB1-1 na latest Scaffold Major Full 2012-08-29 Baci_cere_HuB1-1_V1 Broad Institute GCA_000293725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/725/GCF_000293725.1_Baci_cere_HuB1-1_V1/ na na na haploid bacteria 5743953 5694837 35.000000 0 7 48 NCBI RefSeq GCF_000293725.1-RS_2026_04_18 2026-04-18 5834 5567 98 na GCF_000293765.1 PRJNA224116 SAMN02603911 na na 1220533 1423 Bacillus subtilis QB928 strain=QB928 na latest Complete Genome Major Full 2012-08-28 ASM29376v1 The Chinese University of Hong Kong GCA_000293765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/765/GCF_000293765.1_ASM29376v1/ na na na haploid bacteria 4146839 4146839 43.500000 1 1 1 NCBI RefSeq GCF_000293765.1-RS_2025_06_27 2025-06-27 4335 4152 121 23105055 GCF_000293785.1 PRJNA224116 SAMN02469994 AKZI00000000.1 na 1187851 1187851 Rhodovulum sp. PH10 strain=PH10 na latest Contig Major Full 2012-08-28 ASM29378v1 Institute of Microbial Technology GCA_000293785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/785/GCF_000293785.1_ASM29378v1/ na na na haploid bacteria 4831432 4831432 69.500000 0 273 273 NCBI RefSeq GCF_000293785.1-RS_2025_08_27 2025-08-27 4505 4382 56 23105089 GCF_000293805.1 PRJNA224116 SAMN02470017 AMBZ00000000.1 na 1206781 44250 Paenibacillus alvei DSM 29 strain=DSM 29 na latest Contig Major Full 2012-08-28 ASM29380v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000293805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/805/GCF_000293805.1_ASM29380v1/ na assembly from type material na haploid bacteria 6834602 6834602 46.000000 4 25 25 NCBI RefSeq GCF_000293805.1-RS_2026_03_28 2026-03-28 6707 6276 110 23105091 GCF_000293865.2 PRJNA224116 SAMN02470021 ALKN00000000.2 na 1100720 1100720 Limnohabitans sp. Rim28 strain=Rim28 na latest Contig Major Full 2018-04-28 ASM29386v2 Institute of Microbiology, Academy of Sciences, Czech Republic GCA_000293865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/865/GCF_000293865.2_ASM29386v2/ na na na haploid bacteria 3407253 3407253 58.500000 0 67 67 NCBI RefSeq GCF_000293865.2-RS_2024_08_14 2024-08-14 3402 3322 46 23105051 GCF_000293885.2 PRJNA224116 SAMN01112396 na na 1221522 294 Pseudomonas fluorescens NCIMB 11764 strain=NCIMB 11764 na latest Complete Genome Major Full 2015-08-07 ASM29388v3 University of North Texas GCA_000293885.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/885/GCF_000293885.2_ASM29388v3/ na na na haploid bacteria 6998154 6998154 59.000000 1 1 1 NCBI RefSeq GCF_000293885.2-RS_2025_04_26 2025-04-26 6480 6251 96 23144379;26430033 GCF_000293905.1 PRJNA224116 SAMN02418812 AMBU00000000.1 na 1182164 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00322 strain=CFSAN00322 na latest Contig Major Full 2012-08-28 ASM29390v1 FDA GCA_000293905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/905/GCF_000293905.1_ASM29390v1/ na na na haploid bacteria 4748949 4748949 52.000000 0 74 74 NCBI RefSeq GCF_000293905.1-RS_2025_06_02 2025-06-02 4676 4385 102 23405335 GCF_000293925.1 PRJNA224116 SAMN02415286 AMBX00000000.1 na 1182170 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00328 strain=CFSAN00328 na latest Contig Major Full 2012-08-28 ASM29392v1 FDA GCA_000293925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/925/GCF_000293925.1_ASM29392v1/ na na na haploid bacteria 4753975 4753975 52.000000 0 59 59 NCBI RefSeq GCF_000293925.1-RS_2025_06_03 2025-06-03 4672 4431 104 23405335 GCF_000293945.1 PRJNA224116 SAMN02415284 AMBV00000000.1 na 1182167 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00325 strain=CFSAN00325 na latest Contig Major Full 2012-08-28 ASM29394v1 FDA GCA_000293945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/945/GCF_000293945.1_ASM29394v1/ na na na haploid bacteria 4750953 4750953 52.000000 0 55 55 NCBI RefSeq GCF_000293945.1-RS_2025_06_03 2025-06-03 4674 4429 100 23405335 GCF_000293965.1 PRJNA224116 SAMN02415285 AMBW00000000.1 na 1182168 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00326 strain=CFSAN00326 na latest Contig Major Full 2012-08-28 ASM29396v1 FDA GCA_000293965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/965/GCF_000293965.1_ASM29396v1/ na na na haploid bacteria 4752905 4752905 52.000000 0 46 46 NCBI RefSeq GCF_000293965.1-RS_2025_06_03 2025-06-03 4671 4400 108 23405335 GCF_000293985.2 PRJNA224116 SAMN02299460 ALZI00000000.1 na 1134784 1351 Enterococcus faecalis 599 strain=599 na latest Scaffold Minor Full 2012-08-29 ASM29398v2 Washington University GCA_000293985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/293/985/GCF_000293985.2_ASM29398v2/ na na na haploid bacteria 3048409 3047949 37.000000 0 106 129 NCBI RefSeq GCF_000293985.2-RS_2026_01_21 2026-01-21 3039 2914 53 na GCF_000294005.2 PRJNA224116 SAMN02299461 ALZJ00000000.1 na 1134785 1351 Enterococcus faecalis ERV103 strain=ERV103 na latest Scaffold Minor Full 2012-08-29 ASM29400v2 Washington University GCA_000294005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/005/GCF_000294005.2_ASM29400v2/ na na na haploid bacteria 3064819 3064119 37.500000 0 56 91 NCBI RefSeq GCF_000294005.2-RS_2025_08_25 2025-08-25 3017 2909 42 na GCF_000294025.2 PRJNA224116 SAMN02299462 ALZK00000000.1 na 1134786 1351 Enterococcus faecalis ERV116 strain=ERV116 na latest Scaffold Minor Full 2012-08-29 ASM29402v2 Washington University GCA_000294025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/025/GCF_000294025.2_ASM29402v2/ na na na haploid bacteria 3069746 3069226 37.500000 0 54 80 NCBI RefSeq GCF_000294025.2-RS_2026_01_21 2026-01-21 3027 2910 54 na GCF_000294045.1 PRJNA224116 SAMN02299463 ALZL00000000.1 na 1134787 1351 Enterococcus faecalis ERV129 strain=ERV129 na latest Scaffold Major Full 2012-08-29 ASM29404v1 Washington University GCA_000294045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/045/GCF_000294045.1_ASM29404v1/ na na na haploid bacteria 3157953 3157253 37.500000 0 81 116 NCBI RefSeq GCF_000294045.1-RS_2025_08_01 2025-08-01 3132 2996 55 na GCF_000294065.2 PRJNA224116 SAMN02299464 ALZM00000000.1 na 1134788 1351 Enterococcus faecalis ERV25 strain=ERV25 na latest Scaffold Minor Full 2012-08-29 ASM29406v2 Washington University GCA_000294065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/065/GCF_000294065.2_ASM29406v2/ na na na haploid bacteria 3087355 3086495 37.500000 0 93 136 NCBI RefSeq GCF_000294065.2-RS_2025_07_15 2025-07-15 3073 2936 47 na GCF_000294085.2 PRJNA224116 SAMN02299465 ALZN00000000.1 na 1134789 1351 Enterococcus faecalis ERV31 strain=ERV31 na latest Scaffold Minor Full 2012-08-29 ASM29408v2 Washington University GCA_000294085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/085/GCF_000294085.2_ASM29408v2/ na na na haploid bacteria 3053169 3052589 37.500000 0 83 112 NCBI RefSeq GCF_000294085.2-RS_2026_01_21 2026-01-21 2996 2881 45 na GCF_000294105.2 PRJNA224116 SAMN02299466 ALZO00000000.1 na 1134790 1351 Enterococcus faecalis ERV37 strain=ERV37 na latest Scaffold Minor Full 2012-08-29 ASM29410v2 Washington University GCA_000294105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/105/GCF_000294105.2_ASM29410v2/ na na na haploid bacteria 3120218 3119118 37.500000 0 126 181 NCBI RefSeq GCF_000294105.2-RS_2026_01_21 2026-01-21 3143 3002 58 na GCF_000294125.1 PRJNA224116 SAMN02299467 ALZP00000000.1 na 1134791 1351 Enterococcus faecalis ERV41 strain=ERV41 na latest Scaffold Major Full 2012-08-29 ASM29412v1 Washington University GCA_000294125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/125/GCF_000294125.1_ASM29412v1/ na na na haploid bacteria 3152134 3151514 37.500000 0 129 160 NCBI RefSeq GCF_000294125.1-RS_2025_07_31 2025-07-31 3174 3038 45 na GCF_000294145.2 PRJNA224116 SAMN02299468 ALZQ00000000.1 na 1134792 1351 Enterococcus faecalis ERV62 strain=ERV62 na latest Scaffold Minor Full 2012-08-29 ASM29414v2 Washington University GCA_000294145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/145/GCF_000294145.2_ASM29414v2/ na na na haploid bacteria 3117512 3116812 37.500000 0 76 111 NCBI RefSeq GCF_000294145.2-RS_2026_01_21 2026-01-21 3113 2978 58 na GCF_000294165.2 PRJNA224116 SAMN02299469 ALZR00000000.1 na 1134793 1351 Enterococcus faecalis ERV63 strain=ERV63 na latest Scaffold Minor Full 2012-08-29 ASM29416v2 Washington University GCA_000294165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/165/GCF_000294165.2_ASM29416v2/ na na na haploid bacteria 3165118 3163581 37.500000 0 94 140 NCBI RefSeq GCF_000294165.2-RS_2026_01_21 2026-01-21 3194 3046 58 na GCF_000294185.2 PRJNA224116 SAMN02299470 ALZS00000000.1 na 1134794 1351 Enterococcus faecalis ERV65 strain=ERV65 na latest Scaffold Minor Full 2012-08-29 ASM29418v2 Washington University GCA_000294185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/185/GCF_000294185.2_ASM29418v2/ na na na haploid bacteria 3093274 3092284 37.500000 0 102 141 NCBI RefSeq GCF_000294185.2-RS_2025_07_15 2025-07-15 3095 2947 57 na GCF_000294205.2 PRJNA224116 SAMN02299471 ALZT00000000.1 na 1134795 1351 Enterococcus faecalis ERV68 strain=ERV68 na latest Scaffold Minor Full 2012-08-29 ASM29420v2 Washington University GCA_000294205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/205/GCF_000294205.2_ASM29420v2/ na na na haploid bacteria 3134751 3134071 37.500000 0 100 134 NCBI RefSeq GCF_000294205.2-RS_2026_01_21 2026-01-21 3154 3015 58 na GCF_000294225.2 PRJNA224116 SAMN02299472 ALZU00000000.1 na 1134796 1351 Enterococcus faecalis ERV72 strain=ERV72 na latest Scaffold Minor Full 2012-08-29 ASM29422v2 Washington University GCA_000294225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/225/GCF_000294225.2_ASM29422v2/ na na na haploid bacteria 3137145 3136365 37.500000 0 94 133 NCBI RefSeq GCF_000294225.2-RS_2025_07_15 2025-07-15 3151 3015 56 na GCF_000294245.2 PRJNA224116 SAMN02299473 ALZV00000000.1 na 1134797 1351 Enterococcus faecalis ERV73 strain=ERV73 na latest Scaffold Minor Full 2012-08-29 ASM29424v2 Washington University GCA_000294245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/245/GCF_000294245.2_ASM29424v2/ na na na haploid bacteria 3085417 3076247 37.500000 0 125 250 NCBI RefSeq GCF_000294245.2-RS_2026_01_21 2026-01-21 3122 2955 55 na GCF_000294265.2 PRJNA224116 SAMN02299474 ALZW00000000.1 na 1134798 1351 Enterococcus faecalis ERV81 strain=ERV81 na latest Scaffold Minor Full 2012-08-29 ASM29426v2 Washington University GCA_000294265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/265/GCF_000294265.2_ASM29426v2/ na na na haploid bacteria 3140553 3136600 37.500000 0 93 172 NCBI RefSeq GCF_000294265.2-RS_2025_07_15 2025-07-15 3151 3003 51 na GCF_000294285.2 PRJNA224116 SAMN02299475 ALZX00000000.1 na 1134799 1351 Enterococcus faecalis ERV85 strain=ERV85 na latest Scaffold Minor Full 2012-08-29 ASM29428v2 Washington University GCA_000294285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/285/GCF_000294285.2_ASM29428v2/ na na na haploid bacteria 3129469 3128229 37.500000 0 121 183 NCBI RefSeq GCF_000294285.2-RS_2025_07_15 2025-07-15 3155 3004 54 na GCF_000294305.2 PRJNA224116 SAMN02299476 ALZY00000000.1 na 1134800 1351 Enterococcus faecalis ERV93 strain=ERV93 na latest Scaffold Minor Full 2012-08-29 ASM29430v2 Washington University GCA_000294305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/305/GCF_000294305.2_ASM29430v2/ na na na haploid bacteria 3098181 3097561 37.500000 0 103 134 NCBI RefSeq GCF_000294305.2-RS_2025_07_15 2025-07-15 3096 2953 58 na GCF_000294325.2 PRJNA224116 SAMN02299477 ALZZ00000000.1 na 1134801 1351 Enterococcus faecalis R508 strain=R508 na latest Scaffold Minor Full 2012-08-29 ASM29432v2 Washington University GCA_000294325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/325/GCF_000294325.2_ASM29432v2/ na na na haploid bacteria 2793034 2791976 37.500000 0 66 89 NCBI RefSeq GCF_000294325.2-RS_2026_01_21 2026-01-21 2681 2586 49 na GCF_000294345.2 PRJNA224116 SAMN02299478 AMAA00000000.1 na 1134802 1352 Enterococcus faecium TX1337RF strain=TX1337RF na latest Scaffold Minor Full 2012-08-29 ASM29434v2 Washington University GCA_000294345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/345/GCF_000294345.2_ASM29434v2/ na na na haploid bacteria 2686735 2681284 38.000000 0 47 110 NCBI RefSeq GCF_000294345.2-RS_2026_01_21 2026-01-21 2622 2519 44 na GCF_000294365.1 PRJNA224116 SAMN02603641 na na 1193292 573 Klebsiella pneumoniae subsp. pneumoniae 1084 strain=1084 na latest Complete Genome Major Full 2012-08-29 ASM29436v1 National Chung Hsing University GCA_000294365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/365/GCF_000294365.1_ASM29436v1/ na na na haploid bacteria 5386705 5386705 57.500000 1 1 1 NCBI RefSeq GCF_000294365.1-RS_2025_01_05 2025-01-05 5173 4869 116 23105059 GCF_000294385.2 PRJNA224116 SAMN02299517 AMAB00000000.1 na 1134842 1280 Staphylococcus aureus subsp. aureus CM05 strain=CM05 na latest Scaffold Minor Full 2012-08-30 ASM29438v2 Washington University GCA_000294385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/385/GCF_000294385.2_ASM29438v2/ na na na haploid bacteria 2833137 2832419 32.500000 0 105 135 NCBI RefSeq GCF_000294385.2-RS_2025_07_22 2025-07-22 2873 2731 30 na GCF_000294425.1 PRJNA224116 SAMN02471698 ALWJ00000000.1 na 1214914 28034 Sulfobacillus thermosulfidooxidans str. Cutipay strain=Cutipay na latest Scaffold Major Full 2012-09-04 ASM29442v1 Mathomics GCA_000294425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/425/GCF_000294425.1_ASM29442v1/ na na na haploid bacteria 3862012 3858948 49.500000 0 35 47 NCBI RefSeq GCF_000294425.1-RS_2026_04_14 2026-04-14 3933 3774 74 23105067 GCF_000294445.2 PRJNA224116 SAMN02471870 ALPV00000000.2 na 1193146 303 Pseudomonas putida LS46 strain=LS46 na latest Contig Major Full 2013-03-27 ASM29444v2 University of Manitoba, GCA_000294445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/445/GCF_000294445.2_ASM29444v2/ na na na haploid bacteria 5874759 5874759 61.500000 0 32 32 NCBI RefSeq GCF_000294445.2-RS_2025_04_18 2025-04-18 5373 5164 102 22804681;23599293 GCF_000294465.1 PRJNA224116 SAMN02470207 ALPU00000000.1 na 1202667 1202667 Staphylococcus sp. OJ82 strain=OJ82 na latest Contig Major Full 2012-08-31 ASM29446v1 Korea University GCA_000294465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/465/GCF_000294465.1_ASM29446v1/ na na na haploid bacteria 2899210 2899210 33.000000 0 28 28 NCBI RefSeq GCF_000294465.1-RS_2025_08_27 2025-08-27 2858 2718 73 23105083 GCF_000294495.1 PRJNA224116 SAMN02604110 na na 1184252 1307 Streptococcus suis S735 strain=S735 na latest Complete Genome Major Full 2012-09-04 ASM29449v1 Universite Laval GCA_000294495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/495/GCF_000294495.1_ASM29449v1/ na assembly from type material na haploid bacteria 1980887 1980887 41.500000 1 1 1 NCBI RefSeq GCF_000294495.1-RS_2026_03_20 2026-03-20 1922 1787 72 23105076 GCF_000294515.1 PRJNA224116 SAMN02603688 na na 1205910 53437 Nocardiopsis alba ATCC BAA-2165 strain=ATCC BAA-2165 na latest Complete Genome Major Full 2012-09-04 ASM29451v1 Ohio University GCA_000294515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/515/GCF_000294515.1_ASM29451v1/ na na na haploid bacteria 5848211 5848211 69.500000 1 1 1 NCBI RefSeq GCF_000294515.1-RS_2024_10_21 2024-10-21 5168 4954 71 23105086 GCF_000294535.1 PRJNA224116 SAMN02603169 na na 1218933 554 Pectobacterium carotovorum subsp. carotovorum PCC21 strain=PCC21 na latest Complete Genome Major Full 2012-09-04 ASM29453v1 Daegu University GCA_000294535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/535/GCF_000294535.1_ASM29453v1/ na na na haploid bacteria 4842771 4842771 52.000000 1 1 1 NCBI RefSeq GCF_000294535.1-RS_2025_02_23 2025-02-23 4329 4123 104 23105077 GCF_000294555.1 PRJNA224116 SAMN02471522 AJII00000000.1 na 1157949 1157949 Thermotoga sp. EMP strain=EMP na latest Contig Major Full 2012-09-04 ASM29455v1 University of Alberta GCA_000294555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/555/GCF_000294555.1_ASM29455v1/ na na na haploid bacteria 1835066 1835066 46.000000 0 13 13 NCBI RefSeq GCF_000294555.1-RS_2025_08_24 2025-08-24 1886 1812 52 25500512 GCF_000294595.1 PRJNA224116 SAMN02471747 ALPM00000000.1 na 494419 494419 Arthrobacter sp. TB 23 strain=TB 23 na latest Contig Major Full 2012-09-05 ASM29459v1 Università degli Studi di Firenze GCA_000294595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/595/GCF_000294595.1_ASM29459v1/ na na na haploid bacteria 3542308 3542308 63.500000 0 126 126 NCBI RefSeq GCF_000294595.1-RS_2025_08_27 2025-08-27 3393 3225 64 23105071 GCF_000294635.1 PRJNA224116 SAMN02603176 na na 1229785 28450 Burkholderia pseudomallei BPC006 strain=BPC006 na latest Complete Genome Major Full 2012-09-05 ASM29463v1 Department of Clinical Microbiology and Immunology, College of Medical Laboratory, National Engineer Research Center for Immunization Products, Third Military Medical University, Chongqing, China. GCA_000294635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/635/GCF_000294635.1_ASM29463v1/ na na na haploid bacteria 7155061 7155061 68.000000 2 2 2 NCBI RefSeq GCF_000294635.1-RS_2026_03_28 2026-03-28 6389 6175 76 23144371 GCF_000294655.1 PRJNA224116 SAMEA2272023 CAHP00000000.1 reference genome 1150626 1083 Magnetospirillum molischianum DSM 120 strain=DSM 120 na latest Contig Major Full 2012-03-16 Pm_DSM120 CNRS GCA_000294655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/655/GCF_000294655.1_Pm_DSM120/ na assembly from type material na haploid bacteria 3805617 3805617 61.500000 0 61 61 NCBI RefSeq GCF_000294655.1-RS_2025_12_09 2025-12-09 3702 3569 65 22689244 GCF_000294675.1 PRJNA224116 SAMN02471209 AKZN00000000.1 na 1200346 89784 Alicyclobacillus hesperidum URH17-3-68 strain=URH17-3-68 na latest Contig Major Full 2012-09-05 ASM29467v1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences GCA_000294675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/675/GCF_000294675.1_ASM29467v1/ na na na haploid bacteria 2967160 2967160 54.000000 0 78 78 NCBI RefSeq GCF_000294675.1-RS_2026_03_20 2026-03-20 2956 2828 82 23105079 GCF_000294695.2 PRJNA224116 SAMN02603270 na na 1118963 1118963 Arthrobacter sp. Rue61a strain=Rue61a na latest Complete Genome Major Full 2012-09-07 ASM29469v2 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000294695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/695/GCF_000294695.2_ASM29469v2/ na na na haploid bacteria 5081038 5081038 62.000000 3 3 3 NCBI RefSeq GCF_000294695.2-RS_2024_07_01 2024-07-01 4743 4626 75 12730200;15533053;15699198;17337569;23039946 GCF_000294715.1 PRJNA224116 SAMN02603022 na na 1225179 803 Bartonella quintana RM-11 strain=RM-11 na latest Complete Genome Major Full 2012-09-06 ASM29471v1 Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity GCA_000294715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/715/GCF_000294715.1_ASM29471v1/ na na na haploid bacteria 1587646 1587646 39.000000 1 1 1 NCBI RefSeq GCF_000294715.1-RS_2026_04_01 2026-04-01 1356 1193 52 23105078 GCF_000294755.1 PRJNA224116 SAMN02470180 ALEF00000000.1 na 1196028 1482 Virgibacillus halodenitrificans 1806 strain=1806 na latest Contig Major Full 2012-09-06 VH01 KRIBB GCA_000294755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/755/GCF_000294755.1_VH01/ na na na haploid bacteria 3920549 3920549 37.500000 0 92 92 NCBI RefSeq GCF_000294755.1-RS_2026_03_28 2026-03-28 3906 3828 57 23105070 GCF_000294775.2 PRJNA224116 SAMN02470179 na na 1196031 665099 Cytobacillus oceanisediminis 2691 strain=2691 na latest Complete Genome Major Full 2016-05-09 ASM29477v2 KRIBB GCA_000294775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/775/GCF_000294775.2_ASM29477v2/ na na na haploid bacteria 5848607 5848607 41.000000 2 2 2 NCBI RefSeq GCF_000294775.2-RS_2025_03_23 2025-03-23 5970 5742 146 na GCF_000294815.2 PRJNA224116 SAMN02299516 AMAC00000000.1 na 1134841 1352 Enterococcus faecium V689 strain=V689 na latest Scaffold Minor Full 2012-09-11 ASM29481v2 Washington University GCA_000294815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/815/GCF_000294815.2_ASM29481v2/ na na na haploid bacteria 2862275 2861137 37.500000 0 214 255 NCBI RefSeq GCF_000294815.2-RS_2025_07_15 2025-07-15 2848 2697 36 na GCF_000294835.2 PRJNA224116 SAMN02299515 AMAD00000000.1 na 1134840 1352 Enterococcus faecium S447 strain=S447 na latest Scaffold Minor Full 2012-09-11 ASM29483v2 Washington University GCA_000294835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/835/GCF_000294835.2_ASM29483v2/ na na na haploid bacteria 2981945 2978308 37.500000 0 219 303 NCBI RefSeq GCF_000294835.2-RS_2025_07_15 2025-07-15 3053 2878 38 na GCF_000294855.2 PRJNA224116 SAMN02299514 AMAE00000000.1 na 1134839 1352 Enterococcus faecium R501 strain=R501 na latest Scaffold Minor Full 2012-09-11 ASM29485v2 Washington University GCA_000294855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/855/GCF_000294855.2_ASM29485v2/ na na na haploid bacteria 3003974 3002355 38.000000 0 247 312 NCBI RefSeq GCF_000294855.2-RS_2026_01_21 2026-01-21 3067 2872 41 na GCF_000294875.2 PRJNA224116 SAMN02299513 AMAF00000000.1 na 1134838 1352 Enterococcus faecium R499 strain=R499 na latest Scaffold Minor Full 2012-09-11 ASM29487v2 Washington University GCA_000294875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/875/GCF_000294875.2_ASM29487v2/ na na na haploid bacteria 2846776 2846156 38.000000 0 202 233 NCBI RefSeq GCF_000294875.2-RS_2026_01_21 2026-01-21 2881 2734 45 na GCF_000294895.2 PRJNA224116 SAMN02299512 AMAG00000000.1 na 1134837 1352 Enterococcus faecium R497 strain=R497 na latest Scaffold Minor Full 2012-09-11 ASM29489v2 Washington University GCA_000294895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/895/GCF_000294895.2_ASM29489v2/ na na na haploid bacteria 2990139 2983525 37.500000 0 283 383 NCBI RefSeq GCF_000294895.2-RS_2026_01_21 2026-01-21 3089 2883 40 na GCF_000294915.2 PRJNA224116 SAMN02299511 AMAH00000000.1 na 1134836 1352 Enterococcus faecium R496 strain=R496 na latest Scaffold Minor Full 2012-09-11 ASM29491v2 Washington University GCA_000294915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/915/GCF_000294915.2_ASM29491v2/ na na na haploid bacteria 3053811 3052751 37.500000 0 242 289 NCBI RefSeq GCF_000294915.2-RS_2026_01_21 2026-01-21 3142 2983 36 na GCF_000294935.2 PRJNA224116 SAMN02299510 AMAI00000000.1 na 1134835 1352 Enterococcus faecium R494 strain=R494 na latest Scaffold Minor Full 2012-09-11 ASM29493v2 Washington University GCA_000294935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/935/GCF_000294935.2_ASM29493v2/ na na na haploid bacteria 2848583 2847212 37.500000 0 196 236 NCBI RefSeq GCF_000294935.2-RS_2026_01_21 2026-01-21 2865 2710 40 na GCF_000294955.2 PRJNA224116 SAMN02299509 AMAJ00000000.1 na 1134834 1352 Enterococcus faecium R446 strain=R446 na latest Scaffold Minor Full 2012-09-11 ASM29495v2 Washington University GCA_000294955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/955/GCF_000294955.2_ASM29495v2/ na na na haploid bacteria 2980333 2977048 37.500000 0 219 322 NCBI RefSeq GCF_000294955.2-RS_2025_07_15 2025-07-15 3073 2880 45 na GCF_000294975.2 PRJNA224116 SAMN02299508 AMAK00000000.1 na 1134833 1352 Enterococcus faecium P1986 strain=P1986 na latest Scaffold Minor Full 2012-09-11 ASM29497v2 Washington University GCA_000294975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/975/GCF_000294975.2_ASM29497v2/ na na na haploid bacteria 2986144 2984513 37.500000 0 267 332 NCBI RefSeq GCF_000294975.2-RS_2025_07_15 2025-07-15 3059 2875 39 na GCF_000294995.2 PRJNA224116 SAMN02299507 AMAL00000000.1 na 1134832 1352 Enterococcus faecium P1190 strain=P1190 na latest Scaffold Minor Full 2012-09-11 ASM29499v2 Washington University GCA_000294995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/294/995/GCF_000294995.2_ASM29499v2/ na na na haploid bacteria 2893494 2892774 37.500000 0 225 261 NCBI RefSeq GCF_000294995.2-RS_2025_07_15 2025-07-15 2910 2765 40 na GCF_000295015.1 PRJNA224116 SAMN02299506 AMAM00000000.1 na 1134831 1352 Enterococcus faecium P1140 strain=P1140 na latest Scaffold Major Full 2012-09-11 ASM29501v1 Washington University GCA_000295015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/015/GCF_000295015.1_ASM29501v1/ na na na haploid bacteria 2915323 2914111 37.500000 0 194 249 NCBI RefSeq GCF_000295015.1-RS_2026_01_11 2026-01-11 2945 2802 37 na GCF_000295035.2 PRJNA224116 SAMN02299505 AMAN00000000.1 na 1134830 1352 Enterococcus faecium P1139 strain=P1139 na latest Scaffold Minor Full 2012-09-11 ASM29503v2 Washington University GCA_000295035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/035/GCF_000295035.2_ASM29503v2/ na na na haploid bacteria 2986074 2983775 37.500000 0 271 345 NCBI RefSeq GCF_000295035.2-RS_2025_07_15 2025-07-15 3082 2876 53 na GCF_000295055.2 PRJNA224116 SAMN02299479 AMBN00000000.1 na 1134804 1352 Enterococcus faecium 503 strain=503 na latest Scaffold Minor Full 2012-09-11 ASM29505v2 Washington University GCA_000295055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/055/GCF_000295055.2_ASM29505v2/ na na na haploid bacteria 2746732 2746112 38.000000 0 199 230 NCBI RefSeq GCF_000295055.2-RS_2026_01_21 2026-01-21 2731 2586 37 na GCF_000295075.2 PRJNA224116 SAMN02299498 AMAU00000000.1 na 1134823 1352 Enterococcus faecium ERV168 strain=ERV168 na latest Scaffold Minor Full 2012-09-11 ASM29507v2 Washington University GCA_000295075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/075/GCF_000295075.2_ASM29507v2/ na na na haploid bacteria 2983598 2982798 37.500000 0 204 244 NCBI RefSeq GCF_000295075.2-RS_2025_07_15 2025-07-15 3007 2866 34 na GCF_000295095.1 PRJNA224116 SAMN02472053 AKGF00000000.1 reference genome 521393 1288391 Actinomyces timonensis DSM 23838 strain=7400942 na latest Scaffold Major Full 2012-09-14 ASM29509v1 URMITE GCA_000295095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/095/GCF_000295095.1_ASM29509v1/ na assembly from type material na haploid bacteria 2932944 2913054 71.000000 0 4 40 NCBI RefSeq GCF_000295095.1-RS_2026_04_23 2026-04-23 2565 2461 56 23144376 GCF_000295115.2 PRJNA224116 SAMN02299499 AMAT00000000.1 na 1134824 1352 Enterococcus faecium ERV26 strain=ERV26 na latest Scaffold Minor Full 2012-09-11 ASM29511v2 Washington University GCA_000295115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/115/GCF_000295115.2_ASM29511v2/ na na na haploid bacteria 3040911 3039891 38.000000 0 243 294 NCBI RefSeq GCF_000295115.2-RS_2025_07_15 2025-07-15 3120 2942 44 na GCF_000295135.2 PRJNA224116 SAMN02299504 AMAO00000000.1 na 1134829 1352 Enterococcus faecium P1137 strain=P1137 na latest Scaffold Minor Full 2012-09-11 ASM29513v2 Washington University GCA_000295135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/135/GCF_000295135.2_ASM29513v2/ na na na haploid bacteria 2749938 2749178 38.000000 0 177 215 NCBI RefSeq GCF_000295135.2-RS_2025_07_15 2025-07-15 2749 2613 43 na GCF_000295155.2 PRJNA224116 SAMN02299503 AMAP00000000.1 na 1134828 1352 Enterococcus faecium P1123 strain=P1123 na latest Scaffold Minor Full 2012-09-11 ASM29515v2 Washington University GCA_000295155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/155/GCF_000295155.2_ASM29515v2/ na na na haploid bacteria 2976977 2973255 37.500000 0 259 376 NCBI RefSeq GCF_000295155.2-RS_2025_07_15 2025-07-15 3088 2879 48 na GCF_000295175.2 PRJNA224116 SAMN02299502 AMAQ00000000.1 na 1134827 1352 Enterococcus faecium ERV99 strain=ERV99 na latest Scaffold Minor Full 2012-09-11 ASM29517v2 Washington University GCA_000295175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/175/GCF_000295175.2_ASM29517v2/ na na na haploid bacteria 2746813 2746133 38.000000 0 210 244 NCBI RefSeq GCF_000295175.2-RS_2026_01_21 2026-01-21 2754 2612 43 na GCF_000295195.2 PRJNA224116 SAMN02299501 AMAR00000000.1 na 1134826 1352 Enterococcus faecium ERV69 strain=ERV69 na latest Scaffold Minor Full 2012-09-11 ASM29519v2 Washington University GCA_000295195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/195/GCF_000295195.2_ASM29519v2/ na na na haploid bacteria 2977137 2976177 38.000000 0 171 212 NCBI RefSeq GCF_000295195.2-RS_2026_01_21 2026-01-21 3017 2884 40 na GCF_000295215.2 PRJNA224116 SAMN02299500 AMAS00000000.1 na 1134825 1352 Enterococcus faecium ERV38 strain=ERV38 na latest Scaffold Minor Full 2012-09-11 ASM29521v2 Washington University GCA_000295215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/215/GCF_000295215.2_ASM29521v2/ na na na haploid bacteria 2996739 2995939 38.000000 0 179 219 NCBI RefSeq GCF_000295215.2-RS_2026_01_21 2026-01-21 3031 2892 50 na GCF_000295235.2 PRJNA224116 SAMN02299497 AMAV00000000.1 na 1134822 1352 Enterococcus faecium ERV165 strain=ERV165 na latest Scaffold Minor Full 2012-09-11 ASM29523v2 Washington University GCA_000295235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/235/GCF_000295235.2_ASM29523v2/ na na na haploid bacteria 2900513 2899633 38.000000 0 201 245 NCBI RefSeq GCF_000295235.2-RS_2025_07_15 2025-07-15 2924 2762 41 na GCF_000295255.2 PRJNA224116 SAMN02299496 AMAW00000000.1 na 1134821 1352 Enterococcus faecium ERV161 strain=ERV161 na latest Scaffold Minor Full 2012-09-11 ASM29525v2 Washington University GCA_000295255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/255/GCF_000295255.2_ASM29525v2/ na na na haploid bacteria 2794846 2793980 38.000000 0 193 231 NCBI RefSeq GCF_000295255.2-RS_2025_07_15 2025-07-15 2795 2676 34 na GCF_000295275.2 PRJNA224116 SAMN02299480 AMBM00000000.1 na 1134805 1352 Enterococcus faecium 504 strain=504 na latest Scaffold Minor Full 2012-09-11 ASM29527v2 Washington University GCA_000295275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/275/GCF_000295275.2_ASM29527v2/ na na na haploid bacteria 2617730 2616970 38.000000 0 103 141 NCBI RefSeq GCF_000295275.2-RS_2026_01_21 2026-01-21 2591 2414 38 na GCF_000295315.2 PRJNA224116 SAMN02299489 AMBD00000000.1 na 1134814 1352 Enterococcus faecium C1904 strain=C1904 na latest Scaffold Minor Full 2012-09-11 ASM29531v2 Washington University GCA_000295315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/315/GCF_000295315.2_ASM29531v2/ na na na haploid bacteria 2855424 2854744 37.500000 0 212 246 NCBI RefSeq GCF_000295315.2-RS_2025_07_15 2025-07-15 2857 2711 43 na GCF_000295335.2 PRJNA224116 SAMN02299481 AMBL00000000.1 na 1134806 1352 Enterococcus faecium 505 strain=505 na latest Scaffold Minor Full 2012-09-11 ASM29533v2 Washington University GCA_000295335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/335/GCF_000295335.2_ASM29533v2/ na na na haploid bacteria 2619856 2619416 38.500000 0 71 93 NCBI RefSeq GCF_000295335.2-RS_2026_01_21 2026-01-21 2544 2437 42 na GCF_000295355.2 PRJNA224116 SAMN02299495 AMAX00000000.1 na 1134820 1352 Enterococcus faecium ERV102 strain=ERV102 na latest Scaffold Minor Full 2012-09-11 ASM29535v2 Washington University GCA_000295355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/355/GCF_000295355.2_ASM29535v2/ na na na haploid bacteria 2905914 2904701 37.500000 0 212 262 NCBI RefSeq GCF_000295355.2-RS_2025_07_15 2025-07-15 2926 2775 38 na GCF_000295375.2 PRJNA224116 SAMN02299490 AMBC00000000.1 na 1134815 1352 Enterococcus faecium C497 strain=C497 na latest Scaffold Minor Full 2012-09-11 ASM29537v2 Washington University GCA_000295375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/375/GCF_000295375.2_ASM29537v2/ na na na haploid bacteria 2727268 2726588 38.000000 0 180 214 NCBI RefSeq GCF_000295375.2-RS_2025_07_15 2025-07-15 2704 2572 36 na GCF_000295395.2 PRJNA224116 SAMN02299491 AMBB00000000.1 na 1134816 1352 Enterococcus faecium C621 strain=C621 na latest Scaffold Minor Full 2012-09-11 ASM29539v2 Washington University GCA_000295395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/395/GCF_000295395.2_ASM29539v2/ na na na haploid bacteria 2908724 2907664 37.500000 0 213 266 NCBI RefSeq GCF_000295395.2-RS_2026_01_21 2026-01-21 2936 2781 41 na GCF_000295415.2 PRJNA224116 SAMN02299492 AMBA00000000.1 na 1134817 1352 Enterococcus faecium E417 strain=E417 na latest Scaffold Minor Full 2012-09-11 ASM29541v2 Washington University GCA_000295415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/415/GCF_000295415.2_ASM29541v2/ na na na haploid bacteria 2884658 2883878 38.000000 0 176 215 NCBI RefSeq GCF_000295415.2-RS_2025_07_15 2025-07-15 2929 2785 48 na GCF_000295435.2 PRJNA224116 SAMN02299494 AMAY00000000.1 na 1134819 1352 Enterococcus faecium ERV1 strain=ERV1 na latest Scaffold Minor Full 2012-09-11 ASM29543v2 Washington University GCA_000295435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/435/GCF_000295435.2_ASM29543v2/ na na na haploid bacteria 2862452 2861612 37.500000 0 167 209 NCBI RefSeq GCF_000295435.2-RS_2025_07_15 2025-07-15 2891 2768 38 na GCF_000295455.2 PRJNA224116 SAMN02299493 AMAZ00000000.1 na 1134818 1352 Enterococcus faecium E422 strain=E422 na latest Scaffold Minor Full 2012-09-11 ASM29545v2 Washington University GCA_000295455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/455/GCF_000295455.2_ASM29545v2/ na na na haploid bacteria 2899493 2898353 37.500000 0 243 300 NCBI RefSeq GCF_000295455.2-RS_2025_07_15 2025-07-15 2949 2775 38 na GCF_000295475.1 PRJNA224116 SAMN02471988 AKBD00000000.1 na 1163397 287 Pseudomonas aeruginosa CIG1 strain=CIG1 na latest Contig Major Full 2012-09-06 PaCIG1.1 University of Washington GCA_000295475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/475/GCF_000295475.1_PaCIG1.1/ na na na haploid bacteria 6536241 6536241 66.000000 0 544 544 NCBI RefSeq GCF_000295475.1-RS_2025_04_15 2025-04-15 6511 6142 57 22988113 GCF_000295495.2 PRJNA224116 SAMN02299482 AMBK00000000.1 na 1134807 1352 Enterococcus faecium 506 strain=506 na latest Scaffold Minor Full 2012-09-11 ASM29549v2 Washington University GCA_000295495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/495/GCF_000295495.2_ASM29549v2/ na na na haploid bacteria 2804657 2800050 38.000000 0 194 263 NCBI RefSeq GCF_000295495.2-RS_2026_01_21 2026-01-21 2838 2680 34 na GCF_000295515.2 PRJNA224116 SAMN02299483 AMBJ00000000.1 na 1134808 1352 Enterococcus faecium 509 strain=509 na latest Scaffold Minor Full 2012-09-11 ASM29551v2 Washington University GCA_000295515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/515/GCF_000295515.2_ASM29551v2/ na na na haploid bacteria 2978453 2976670 38.000000 0 244 312 NCBI RefSeq GCF_000295515.2-RS_2026_01_21 2026-01-21 3040 2852 45 na GCF_000295535.2 PRJNA224116 SAMN02299484 AMBI00000000.1 na 1134809 1352 Enterococcus faecium 510 strain=510 na latest Scaffold Minor Full 2012-09-11 ASM29553v2 Washington University GCA_000295535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/535/GCF_000295535.2_ASM29553v2/ na na na haploid bacteria 2893419 2892569 37.500000 0 208 245 NCBI RefSeq GCF_000295535.2-RS_2026_01_21 2026-01-21 2910 2787 37 na GCF_000295555.2 PRJNA224116 SAMN02299485 AMBH00000000.1 na 1134810 1352 Enterococcus faecium 511 strain=511 na latest Scaffold Minor Full 2012-09-11 ASM29555v2 Washington University GCA_000295555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/555/GCF_000295555.2_ASM29555v2/ na na na haploid bacteria 2948341 2946755 37.500000 0 249 314 NCBI RefSeq GCF_000295555.2-RS_2026_01_21 2026-01-21 3018 2853 33 na GCF_000295575.2 PRJNA224116 SAMN02299486 AMBG00000000.1 na 1134811 1352 Enterococcus faecium 513 strain=513 na latest Scaffold Minor Full 2012-09-11 ASM29557v2 Washington University GCA_000295575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/575/GCF_000295575.2_ASM29557v2/ na na na haploid bacteria 2862021 2861121 37.500000 0 211 256 NCBI RefSeq GCF_000295575.2-RS_2026_01_21 2026-01-21 2860 2699 39 na GCF_000295595.2 PRJNA224116 SAMN02299488 AMBE00000000.1 na 1134813 1352 Enterococcus faecium 515 strain=515 na latest Scaffold Minor Full 2012-09-11 ASM29559v2 Washington University GCA_000295595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/595/GCF_000295595.2_ASM29559v2/ na na na haploid bacteria 2874959 2874117 37.500000 0 231 266 NCBI RefSeq GCF_000295595.2-RS_2026_01_21 2026-01-21 2903 2750 38 na GCF_000295615.2 PRJNA224116 SAMN02299487 AMBF00000000.1 na 1134812 1352 Enterococcus faecium 514 strain=514 na latest Scaffold Minor Full 2012-09-11 ASM29561v2 Washington University GCA_000295615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/615/GCF_000295615.2_ASM29561v2/ na na na haploid bacteria 2931703 2929942 37.500000 0 246 321 NCBI RefSeq GCF_000295615.2-RS_2026_01_21 2026-01-21 2969 2787 42 na GCF_000295655.1 PRJNA224116 SAMN02603758 na na 1228997 34085 Riemerella anatipestifer RA-CH-1 strain=RA-CH-1 na latest Complete Genome Major Full 2012-09-07 ASM29565v1 Riemerella anatipestifer GCA_000295655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/655/GCF_000295655.1_ASM29565v1/ na na na haploid bacteria 2309519 2309519 35.000000 1 1 1 NCBI RefSeq GCF_000295655.1-RS_2025_09_25 2025-09-25 2199 2124 53 na GCF_000295695.2 PRJNA224116 SAMN02469407 na na 1213182 1392 Bacillus anthracis str. BF1 strain=BF1 na latest Complete Genome Major Full 2020-01-08 ASM29569v2 Bundeswehr Institute of Microbiology, Munich, Germany GCA_000295695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/695/GCF_000295695.2_ASM29569v2/ na na na haploid bacteria 5490208 5490208 35.000000 3 3 3 NCBI RefSeq GCF_000295695.2-RS_2026_03_22 2026-03-22 5761 5256 131 23105087 GCF_000295715.1 PRJNA224116 SAMN02470290 ALWK00000000.1 na 1212545 29378 Staphylococcus arlettae CVD059 strain=CVD059 na latest Contig Major Full 2012-09-10 ASM29571v1 Madurai Kamaraj University GCA_000295715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/715/GCF_000295715.1_ASM29571v1/ na na na haploid bacteria 2565675 2565675 33.500000 0 57 57 NCBI RefSeq GCF_000295715.1-RS_2026_03_28 2026-03-28 2550 2348 83 23144377 GCF_000295775.2 PRJNA224116 SAMN02356007 ALIN00000000.2 na 1206108 562 Escherichia coli J96 strain=J96 na latest Scaffold Major Full 2012-12-21 ASM29577v2 Princeton University GCA_000295775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/775/GCF_000295775.2_ASM29577v2/ na na na haploid bacteria 5540893 5540893 50.500000 1 276 276 NCBI RefSeq GCF_000295775.2-RS_2025_06_13 2025-06-13 5588 5044 147 23469357 GCF_000295825.1 PRJNA224116 SAMN02470132 ALQA00000000.1 na 1194972 1810 Mycolicibacterium vaccae ATCC 25954 strain=ATCC 25954 na latest Scaffold Major Full 2012-09-12 ASM29582v1 KAUST GCA_000295825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/825/GCF_000295825.1_ASM29582v1/ na na na haploid bacteria 6245372 6223660 68.500000 0 33 156 NCBI RefSeq GCF_000295825.1-RS_2025_11_24 2025-11-24 6058 5879 60 23105074 GCF_000295855.1 PRJNA224116 SAMN02470125 ALQB00000000.1 na 1214102 1766 Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 strain=DSM 46621 na latest Scaffold Major Full 2012-09-12 ASM29585v1 KAUST GCA_000295855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/855/GCF_000295855.1_ASM29585v1/ na assembly from type material na haploid bacteria 6349738 6300050 66.000000 0 82 325 NCBI RefSeq GCF_000295855.1-RS_2026_05_16 2026-05-16 6337 6090 61 23105073 GCF_000295895.1 PRJNA224116 SAMN02469420 AMCP00000000.1 na 1223565 1223565 Rhizobium sp. Pop5 strain=Pop5 na latest Contig Major Full 2012-09-10 ASM29589v1 Center for Genomic Sciences GCA_000295895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/895/GCF_000295895.1_ASM29589v1/ na na na haploid bacteria 6499161 6499161 61.000000 0 1413 1413 NCBI RefSeq GCF_000295895.1-RS_2024_06_04 2024-06-04 7180 6215 54 na GCF_000295915.1 PRJNA224116 SAMN02469874 ALYN00000000.1 na 1224142 715 Actinobacillus pleuropneumoniae S8 strain=S8 na latest Contig Major Full 2012-09-10 ASM29591v1 Harbin Veterinary Research Institute GCA_000295915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/915/GCF_000295915.1_ASM29591v1/ na na na haploid bacteria 2263462 2263462 41.000000 0 81 81 NCBI RefSeq GCF_000295915.1-RS_2026_03_20 2026-03-20 2215 2101 67 23144372 GCF_000295935.2 PRJNA224116 SAMN02469969 ALWO00000000.2 reference genome 1189612 579922 Indibacter alkaliphilus LW1 strain=LW1 na latest Contig Major Full 2013-06-04 IndiAl02 Institute of Genomics and Integrative Biology GCA_000295935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/935/GCF_000295935.2_IndiAl02/ na assembly from type material na haploid bacteria 5036047 5036047 39.500000 0 56 56 NCBI RefSeq GCF_000295935.2-RS_2025_12_16 2025-12-16 4308 4236 46 23868132 GCF_000295955.2 PRJNA224116 SAMN02471853 ALXE00000000.1 na 1225184 1225184 Pantoea sp. A4 strain=A4 na latest Contig Minor Full 2012-09-10 ASM29595v2 University of Malaya GCA_000295955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/955/GCF_000295955.2_ASM29595v2/ na na na haploid bacteria 5329719 5329719 53.000000 0 71 71 NCBI RefSeq GCF_000295955.2-RS_2025_08_27 2025-08-27 4802 4684 50 23144374 GCF_000295975.2 PRJNA224116 SAMN00996393 AKHN00000000.2 na 1191280 210 Helicobacter pylori FD430 strain=FD430 na latest Contig Major Full 2013-08-21 FD430 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000295975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/975/GCF_000295975.2_FD430/ na na na haploid bacteria 1640355 1640355 39.000000 0 129 129 NCBI RefSeq GCF_000295975.2-RS_2025_04_15 2025-04-15 1666 1476 48 23012278;24051312 GCF_000295995.2 PRJNA224116 SAMN00996394 AKHO00000000.2 na 1191281 210 Helicobacter pylori FD506 strain=FD506 na latest Contig Major Full 2013-08-21 FD506 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000295995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/295/995/GCF_000295995.2_FD506/ na na na haploid bacteria 1615241 1615241 38.500000 0 105 105 NCBI RefSeq GCF_000295995.2-RS_2025_05_26 2025-05-26 1630 1468 52 23012278;24051312 GCF_000296015.2 PRJNA224116 SAMN00996486 AKHP00000000.2 na 1191464 210 Helicobacter pylori FD535 strain=FD535 na latest Contig Major Full 2013-08-21 FD535 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/015/GCF_000296015.2_FD535/ na na na haploid bacteria 1671564 1671564 39.000000 0 81 81 NCBI RefSeq GCF_000296015.2-RS_2025_04_15 2025-04-15 1648 1480 52 23012278;24051312 GCF_000296035.2 PRJNA224116 SAMN00996395 AKHQ00000000.2 na 1191282 210 Helicobacter pylori FD568 strain=FD568 na latest Contig Major Full 2013-08-21 FD568 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/035/GCF_000296035.2_FD568/ na na na haploid bacteria 1610163 1610163 38.500000 0 113 113 NCBI RefSeq GCF_000296035.2-RS_2025_04_15 2025-04-15 1625 1437 49 23012278;24051312 GCF_000296055.2 PRJNA224116 SAMN00996396 AKHR00000000.2 na 1191283 210 Helicobacter pylori FD577 strain=FD577 na latest Contig Major Full 2013-08-21 FD577 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/055/GCF_000296055.2_FD577/ na na na haploid bacteria 1625905 1625905 38.500000 0 74 74 NCBI RefSeq GCF_000296055.2-RS_2025_04_15 2025-04-15 1609 1429 50 23012278;24051312 GCF_000296075.2 PRJNA224116 SAMN00996398 AKHS00000000.2 na 1191285 210 Helicobacter pylori FD703 strain=FD703 na latest Contig Major Full 2013-08-21 FD703 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/075/GCF_000296075.2_FD703/ na na na haploid bacteria 1676483 1676483 39.000000 0 88 88 NCBI RefSeq GCF_000296075.2-RS_2025_08_03 2025-08-03 1660 1469 58 23012278;24051312 GCF_000296095.2 PRJNA224116 SAMN00996397 AKHT00000000.2 na 1191284 210 Helicobacter pylori FD662 strain=FD662 na latest Contig Major Full 2013-08-21 FD662 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/095/GCF_000296095.2_FD662/ na na na haploid bacteria 1659453 1659453 39.000000 0 66 66 NCBI RefSeq GCF_000296095.2-RS_2025_05_26 2025-05-26 1631 1451 46 23012278;24051312 GCF_000296115.2 PRJNA224116 SAMN00996399 AKHU00000000.2 na 1191286 210 Helicobacter pylori FD719 strain=FD719 na latest Contig Major Full 2013-08-21 FD719 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/115/GCF_000296115.2_FD719/ na na na haploid bacteria 1642171 1642171 39.000000 0 79 79 NCBI RefSeq GCF_000296115.2-RS_2025_04_15 2025-04-15 1632 1439 50 23012278;24051312 GCF_000296135.2 PRJNA224116 SAMN00996400 AKHV00000000.2 na 1191287 210 Helicobacter pylori GC26 strain=GC26 na latest Contig Major Full 2013-08-21 GC26 University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales GCA_000296135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/135/GCF_000296135.2_GC26/ na na na haploid bacteria 1622472 1622472 38.500000 0 111 111 NCBI RefSeq GCF_000296135.2-RS_2025_04_15 2025-04-15 1645 1474 50 23012278;24051312 GCF_000296215.2 PRJNA224116 SAMN02469422 na na 1223566 1223566 Bradyrhizobium sp. CCGE-LA001 strain=CCGE-LA001 na latest Complete Genome Major Full 2016-01-25 ASM29621v2 Dra. Esperanza Martínez Romero GCA_000296215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/215/GCF_000296215.2_ASM29621v2/ na na na haploid bacteria 7833499 7833499 63.500000 1 1 1 NCBI RefSeq GCF_000296215.2-RS_2025_08_25 2025-08-25 7263 7081 54 24952318;26988045 GCF_000296275.1 PRJNA224116 SAMN00792233 AKFT00000000.1 na 1125718 461393 Actinomyces massiliensis F0489 strain=F0489 na latest Contig Major Full 2012-07-10 AmassiliensisF0489v1.0 J. Craig Venter Institute GCA_000296275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/275/GCF_000296275.1_AmassiliensisF0489v1.0/ na na na haploid bacteria 3416440 3416440 67.500000 0 233 233 NCBI RefSeq GCF_000296275.1-RS_2026_02_17 2026-02-17 3018 2884 57 na GCF_000296305.1 PRJNA224116 SAMN00017661 AMGB00000000.1 na 766155 623 Shigella flexneri 1485-80 strain=1485-80 na latest Contig Major Full 2012-09-12 ASM29630v1 Institute for Genome Sciences GCA_000296305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/305/GCF_000296305.1_ASM29630v1/ na na na haploid bacteria 4680138 4680138 51.000000 0 82 82 NCBI RefSeq GCF_000296305.1-RS_2025_08_03 2025-08-03 4924 3973 124 na GCF_000296325.1 PRJNA224116 SAMN02470270 ALOF00000000.1 na 1191475 287 Pseudomonas aeruginosa PAO579 strain=PAO579 na latest Contig Major Full 2012-09-12 PAO579-1.0 Marshall University School of Medicine GCA_000296325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/325/GCF_000296325.1_PAO579-1.0/ na na na haploid bacteria 6015846 6015846 66.500000 0 16 16 NCBI RefSeq GCF_000296325.1-RS_2025_04_26 2025-04-26 5628 5488 81 23144378 GCF_000296345.2 PRJNA224116 SAMN02470650 ALYC00000000.2 na 1161102 747 Pasteurella multocida subsp. multocida VTCCBAA264 strain=VTCCBAA264 na latest Contig Major Full 2014-06-19 ASM29634v2 Veterinary Type Culture Collection, NRCE, Sirsa Road, Hisar GCA_000296345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/345/GCF_000296345.2_ASM29634v2/ na na na haploid bacteria 2280332 2280332 40.500000 0 78 78 NCBI RefSeq GCF_000296345.2-RS_2026_01_24 2026-01-24 2190 2014 53 25081265 GCF_000296385.1 PRJNA224116 SAMN02463955 ALOA00000000.1 na 936595 936595 Lachnoanaerobaculum sp. OBRC5-5 strain=OBRC5-5 na latest Scaffold Major Full 2012-09-17 Clos_bact_OBRC5-5_V1 Broad Institute GCA_000296385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/385/GCF_000296385.1_Clos_bact_OBRC5-5_V1/ na na na haploid bacteria 2932121 2897677 36.500000 0 7 25 NCBI RefSeq GCF_000296385.1-RS_2025_08_25 2025-08-25 2734 2619 62 na GCF_000296405.1 PRJNA224116 SAMN02463914 AHAE00000000.1 reference genome 883169 29321 Corynebacterium otitidis ATCC 51513 strain=ATCC 51513 na latest Scaffold Major Full 2012-09-17 Turi_otit_ATCC_51513_V1 Broad Institute GCA_000296405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/405/GCF_000296405.1_Turi_otit_ATCC_51513_V1/ na assembly from type material na haploid bacteria 2118285 2090523 71.500000 0 6 87 NCBI RefSeq GCF_000296405.1-RS_2025_12_10 2025-12-10 1883 1778 61 na GCF_000296445.1 PRJNA224116 SAMN02595396 ADMD00000000.1 reference genome 742818 626934 Slackia piriformis YIT 12062 strain=YIT 12062 na latest Scaffold Major Full 2012-09-17 Slac_piri_YIT_12062_V1 Broad Institute GCA_000296445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/445/GCF_000296445.1_Slac_piri_YIT_12062_V1/ na assembly from type material na haploid bacteria 2119335 2100457 57.500000 0 5 13 NCBI RefSeq GCF_000296445.1-RS_2025_12_13 2025-12-13 1826 1745 70 na GCF_000296465.1 PRJNA224116 SAMN02595395 ADLE00000000.1 reference genome 742726 487174 Barnesiella intestinihominis YIT 11860 strain=YIT 11860 na latest Scaffold Major Full 2012-09-17 Barn_inte_YIT_11860_V1 Broad Institute GCA_000296465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/465/GCF_000296465.1_Barn_inte_YIT_11860_V1/ na assembly from type material na haploid bacteria 3443906 3433706 44.000000 0 5 19 NCBI RefSeq GCF_000296465.1-RS_2026_01_08 2026-01-08 2796 2695 75 na GCF_000296485.1 PRJNA224116 SAMN02463915 AGWP00000000.1 na 888439 33007 Winkia neuii BV029A5 strain=BVS029A5 na latest Scaffold Major Full 2012-09-17 Acti_neui_BVS029A5_V1 Broad Institute GCA_000296485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/485/GCF_000296485.1_Acti_neui_BVS029A5_V1/ na na na haploid bacteria 2143714 2136781 56.500000 0 7 11 NCBI RefSeq GCF_000296485.1-RS_2025_03_13 2025-03-13 1988 1911 60 na GCF_000296505.1 PRJNA224116 SAMN02463884 AGWQ00000000.1 na 883077 131111 Schaalia turicensis ACS-279-V-Col4 strain=ACS-279-V-Col4 na latest Scaffold Major Full 2012-09-17 Acti_turi_ACS-279-V-COL4_V1 Broad Institute GCA_000296505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/505/GCF_000296505.1_Acti_turi_ACS-279-V-COL4_V1/ na na na haploid bacteria 1967755 1951528 57.000000 0 5 10 NCBI RefSeq GCF_000296505.1-RS_2026_04_16 2026-04-16 1758 1674 64 na GCF_000296575.1 PRJNA224116 SAMN02602981 na na 1133568 52584 Brachyspira pilosicoli B2904 strain=B2904 na latest Complete Genome Major Full 2012-09-14 ASM29657v1 Animal Health and Veterinary Laboratories Agency (AHVLA) GCA_000296575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/575/GCF_000296575.1_ASM29657v1/ na na na haploid bacteria 2765477 2765477 28.000000 1 1 1 NCBI RefSeq GCF_000296575.1-RS_2025_07_06 2025-07-06 2638 2479 40 22947175 GCF_000296595.1 PRJNA224116 SAMN02603722 na na 1229492 1280 Staphylococcus aureus 08BA02176 strain=08BA02176 na latest Complete Genome Major Full 2012-09-14 ASM29659v1 Public Health Agency of Canada GCA_000296595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/595/GCF_000296595.1_ASM29659v1/ na na na haploid bacteria 2782313 2782313 33.000000 1 1 1 NCBI RefSeq GCF_000296595.1-RS_2025_04_26 2025-04-26 2739 2560 78 23144384 GCF_000296615.1 PRJNA224116 SAMN02470121 ALWQ00000000.1 na 1194088 1194088 Halorubrum sp. T3 strain=T3 na latest Scaffold Major Full 2012-09-17 ASM29661v1 Kunming Institute of Botany, Chinese Academy of Sciences GCA_000296615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/615/GCF_000296615.1_ASM29661v1/ na na na haploid archaea 3168011 3167951 68.500000 0 10 16 NCBI RefSeq GCF_000296615.1-RS_2024_10_21 2024-10-21 3159 3061 58 23144373 GCF_000296695.1 PRJNA224116 SAMD00036617 BAFK00000000.1 reference genome 562729 1163621 Rheinheimera nanhaiensis E407-8 strain=E407-8 na latest Contig Major Full 2012-04-09 ASM29669v1 Shandong University GCA_000296695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/695/GCF_000296695.1_ASM29669v1/ na assembly from type material na haploid bacteria 3987205 3987205 51.500000 0 55 55 NCBI RefSeq GCF_000296695.1-RS_2025_08_08 2025-08-08 3744 3654 74 23209246 GCF_000296775.1 PRJNA224116 SAMN02469595 AJLE00000000.1 na 1165841 1165841 Sulfurovum sp. AR strain=AR na latest Contig Major Full 2012-04-27 ASM29677v1 Chungbuk National University GCA_000296775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/775/GCF_000296775.1_ASM29677v1/ na na na haploid bacteria 2125769 2125769 39.000000 0 11 11 NCBI RefSeq GCF_000296775.1-RS_2024_08_13 2024-08-13 2183 2125 44 22815446 GCF_000296815.2 PRJNA224116 SAMEA2272395 CAIT00000000.1 reference genome 1185876 663275 Fibrisoma limi BUZ 3 strain=type strain:BUZ 3 na latest Contig Major Full 2012-05-16 ASM29681v2 CeBiTec, Bielefeld University GCA_000296815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/815/GCF_000296815.2_ASM29681v2/ na assembly from type material na haploid bacteria 7626970 7626970 52.500000 3 14 14 NCBI RefSeq GCF_000296815.2-RS_2025_09_16 2025-09-16 6356 6281 52 22843583 GCF_000296835.1 PRJNA224116 SAMEA2272002 CAKE00000000.1 reference genome 1423758 1203033 Lactobacillus hominis DSM 23910 = CRBIP 24.179 strain=type strain:CRBIP 24.179 na latest Contig Major Full 2012-07-09 ASM29683v1 Sycou GCA_000296835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/835/GCF_000296835.1_ASM29683v1/ na assembly from type material na haploid bacteria 1928135 1928135 35.000000 0 36 36 NCBI RefSeq GCF_000296835.1-RS_2026_03_20 2026-03-20 1933 1837 60 na GCF_000296855.1 PRJNA224116 SAMEA2272557 CAKC00000000.1 na 1423751 1203069 Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 strain=type strain: CRBIP 24.85 na latest Contig Major Full 2012-07-09 ASM29685v1 Sycou GCA_000296855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/855/GCF_000296855.1_ASM29685v1/ na assembly from type material na haploid bacteria 1927182 1927182 37.000000 0 96 96 NCBI RefSeq GCF_000296855.1-RS_2026_04_04 2026-04-04 1972 1828 61 na GCF_000296875.1 PRJNA224116 SAMN02470271 AJQY00000000.1 na 1169670 1169670 Streptococcus sp. GMD1S strain=GMD1S na latest Contig Major Full 2012-09-14 ASM29687v1 Los Alamos National Laboratory GCA_000296875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/875/GCF_000296875.1_ASM29687v1/ na na na haploid bacteria 2099008 2099008 40.500000 0 480 480 NCBI RefSeq GCF_000296875.1-RS_2024_08_06 2024-08-06 2359 2115 16 23493677 GCF_000296955.1 PRJNA224116 SAMN02470259 AJRE00000000.1 na 1169673 1169673 Streptococcus sp. GMD4S strain=GMD4S na latest Contig Major Full 2012-09-14 ASM29695v1 Los Alamos National Laboratory GCA_000296955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/955/GCF_000296955.1_ASM29695v1/ na na na haploid bacteria 2301983 2301983 41.000000 0 578 578 NCBI RefSeq GCF_000296955.1-RS_2025_08_27 2025-08-27 2592 2316 30 23493677 GCF_000296975.1 PRJNA224116 SAMN02470261 AJQX00000000.1 na 1169665 1169665 Enterococcus sp. GMD1E strain=GMD1E na latest Contig Major Full 2012-09-14 ASM29697v1 Los Alamos National Laboratory GCA_000296975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/975/GCF_000296975.1_ASM29697v1/ na na na haploid bacteria 2571293 2571293 38.000000 0 216 216 NCBI RefSeq GCF_000296975.1-RS_2025_08_27 2025-08-27 2560 2380 25 23493677 GCF_000297015.1 PRJNA224116 SAMN02470280 AJRH00000000.1 na 1169675 1169675 Streptococcus sp. GMD6S strain=GMD6S na latest Contig Major Full 2012-09-14 ASM29701v1 Los Alamos National Laboratory GCA_000297015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/015/GCF_000297015.1_ASM29701v1/ na na na haploid bacteria 2264360 2264360 41.000000 0 393 393 NCBI RefSeq GCF_000297015.1-RS_2025_08_27 2025-08-27 2444 2226 18 23493677 GCF_000297025.1 PRJNA224116 SAMEA2272206 CAKD00000000.1 reference genome 1423790 872327 Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 strain=type strain:CRBIP 24.76 na latest Contig Major Full 2012-07-09 ASM29702v1 Sycou GCA_000297025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/025/GCF_000297025.1_ASM29702v1/ na assembly from type material na haploid bacteria 1905398 1905398 38.500000 0 30 30 NCBI RefSeq GCF_000297025.1-RS_2026_03_20 2026-03-20 1897 1764 66 na GCF_000297055.2 PRJNA224116 SAMD00061061 na reference genome 1163617 649841 Sulfuricella denitrificans skB26 strain=skB26 na latest Complete Genome Major Full 2013-09-09 ASM29705v2 Institute of Low Temperature Science GCA_000297055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/055/GCF_000297055.2_ASM29705v2/ na assembly from type material na haploid bacteria 3217213 3217213 56.000000 2 2 2 NCBI RefSeq GCF_000297055.2-RS_2025_12_13 2025-12-13 3137 3053 55 22773644;25017294 GCF_000297075.2 PRJNA224116 SAMEA4532340 na na 1182590 301 Ectopseudomonas oleovorans CECT 5344 strain=CECT5344 na latest Complete Genome Major Full 2014-02-04 Ppseudo_final CeBiTec, Bielefeld University GCA_000297075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/075/GCF_000297075.2_Ppseudo_final/ na na na haploid bacteria 4686340 4686340 62.500000 1 1 1 NCBI RefSeq GCF_000297075.2-RS_2026_05_05 2026-05-05 4533 4191 86 na GCF_000297095.1 PRJNA224116 SAMN02469408 AEEA00000000.1 na 717227 88058 Treponema primitia ZAS-1 strain=ZAS-1 na latest Contig Major Full 2011-08-03 ASM29709v1 California Institute of Technology GCA_000297095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/095/GCF_000297095.1_ASM29709v1/ na na na haploid bacteria 3790289 3790289 51.000000 0 192 192 NCBI RefSeq GCF_000297095.1-RS_2025_03_19 2025-03-19 3473 3376 55 na GCF_000297115.1 PRJNA224116 SAMEA3138419 CAKP00000000.1 reference genome 857293 515264 Caloramator australicus RC3 strain=RC3 na latest Contig Major Full 2012-07-23 ASM29711v1 Microbial Gene Research and Resources Facility, Griffith University GCA_000297115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/115/GCF_000297115.1_ASM29711v1/ na assembly from type material na haploid bacteria 2638447 2638447 33.000000 0 161 161 NCBI RefSeq GCF_000297115.1-RS_2026_04_14 2026-04-14 2822 2628 89 21421756 GCF_000297155.3 PRJNA224116 SAMN02470052 na na 1114943 83656 Streptomyces tsukubensis NRRL18488 strain=NRRL18488 na latest Complete Genome Major Full 2020-08-27 ASM29715v3 INBIOTEC GCA_000297155.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/155/GCF_000297155.3_ASM29715v3/ na na na haploid bacteria 8005998 8005998 72.000000 3 3 3 NCBI RefSeq GCF_000297155.3-RS_2026_03_30 2026-03-30 6621 6450 87 22740677 GCF_000297175.1 PRJNA224116 SAMN02403951 AKKR00000000.1 na 1194086 630 Yersinia enterocolitica subsp. enterocolitica WA-314 strain=WA-314 na latest Contig Major Full 2012-09-17 ASM29717v1 Max von Pettenkofer-Institut GCA_000297175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/175/GCF_000297175.1_ASM29717v1/ na na na haploid bacteria 4524664 4524664 47.000000 0 129 129 NCBI RefSeq GCF_000297175.1-RS_2025_12_29 2025-12-29 4220 4000 81 22963272 GCF_000297195.3 PRJNA224116 SAMN02304079 na na 463794 294 Pseudomonas fluorescens BBc6R8 strain=BBc6R8 na latest Chromosome Major Full 2020-12-21 ASM29719v3 Institut National de la Recherche Agronomique GCA_000297195.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/195/GCF_000297195.3_ASM29719v3/ na na na haploid bacteria 7033070 7032970 61.000000 1 1 1 NCBI RefSeq GCF_000297195.3-RS_2025_03_12 2025-03-12 6455 6309 82 24407649 GCF_000297215.2 PRJNA224116 SAMN02469792 AMFF00000000.2 na 1227812 1238 Piscirickettsia salmonis LF-89 = ATCC VR-1361 strain=LF-89 na latest Scaffold Major Full 2014-11-26 ASM29721v2 Fraunhofer Chile Research Center for Systems Biotechnology Bio-Computing Division GCA_000297215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/215/GCF_000297215.2_ASM29721v2/ na assembly from type material na haploid bacteria 3029115 2833472 39.500000 0 284 406 NCBI RefSeq GCF_000297215.2-RS_2025_12_19 2025-12-19 2950 2781 59 na GCF_000297235.3 PRJNA224116 SAMN02469950 AMFM00000000.1 na 1230480 562 Escherichia coli EC302/04 strain=EC302/04 na latest Contig Major Full 2016-03-11 EC302/04.1 Institute of Biological Science GCA_000297235.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/235/GCF_000297235.3_EC302_04.1/ na na na haploid bacteria 4984414 4984414 51.000000 1 82 82 NCBI RefSeq GCF_000297235.3-RS_2025_05_22 2025-05-22 4859 4620 82 23144425;26793180 GCF_000297255.1 PRJNA224116 SAMEA2272167 CAGS00000000.1 reference genome 1129897 1206749 Nitrolancea hollandica Lb strain=Lb na latest Contig Major Full 2012-06-06 ASM29725v1 CEA IG Genoscope GCA_000297255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/255/GCF_000297255.1_ASM29725v1/ na assembly from type material na haploid bacteria 3888104 3888104 62.500000 0 736 736 NCBI RefSeq GCF_000297255.1-RS_2025_08_06 2025-08-06 4050 3786 72 22763649;24573161 GCF_000297275.1 PRJNA224116 SAMN02471996 AKZD00000000.1 na 1163392 287 Pseudomonas aeruginosa ATCC 14886 strain=ATCC 14886 na latest Contig Major Full 2012-09-17 ASM29727v1 University of Washington GCA_000297275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/275/GCF_000297275.1_ASM29727v1/ na na na haploid bacteria 6378034 6378034 66.500000 0 211 211 NCBI RefSeq GCF_000297275.1-RS_2025_04_26 2025-04-26 6060 5879 58 22988113 GCF_000297295.1 PRJNA224116 SAMN02471980 AKZE00000000.1 na 1163393 287 Pseudomonas aeruginosa ATCC 25324 strain=ATCC 25324 na latest Contig Major Full 2012-09-17 ASM29729v1 University of Washington GCA_000297295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/295/GCF_000297295.1_ASM29729v1/ na na na haploid bacteria 7103922 7103922 66.000000 0 1023 1023 NCBI RefSeq GCF_000297295.1-RS_2025_04_15 2025-04-15 7360 6867 59 22988113 GCF_000297315.1 PRJNA224116 SAMN02471986 AKZF00000000.1 na 1163394 287 Pseudomonas aeruginosa ATCC 700888 strain=ATCC 700888 na latest Contig Major Full 2012-09-17 ASM29731v1 University of Washington GCA_000297315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/315/GCF_000297315.1_ASM29731v1/ na na na haploid bacteria 6794802 6794802 66.000000 0 600 600 NCBI RefSeq GCF_000297315.1-RS_2025_04_15 2025-04-15 6864 6502 59 22988113 GCF_000297335.1 PRJNA224116 SAMN02471979 AKZG00000000.1 na 1163396 287 Pseudomonas aeruginosa CI27 strain=CI27 na latest Contig Major Full 2012-09-17 ASM29733v1 University of Washington GCA_000297335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/335/GCF_000297335.1_ASM29733v1/ na na na haploid bacteria 6772720 6772720 66.000000 0 160 160 NCBI RefSeq GCF_000297335.1-RS_2025_04_15 2025-04-15 6464 6263 70 22988113 GCF_000297355.1 PRJNA224116 SAMN02471987 AKZH00000000.1 na 1163395 287 Pseudomonas aeruginosa E2 strain=E2 na latest Contig Major Full 2012-09-17 ASM29735v1 University of Washington GCA_000297355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/355/GCF_000297355.1_ASM29735v1/ na na na haploid bacteria 6357331 6357331 66.500000 0 196 196 NCBI RefSeq GCF_000297355.1-RS_2025_04_26 2025-04-26 5959 5806 58 22988113 GCF_000297395.2 PRJNA224116 SAMEA3138422 CAIE00000000.1 reference genome 1150864 285679 Micromonospora lupini str. Lupac 08 strain=Lupac 08 na latest Scaffold Major Full 2013-01-10 ASM29739v2 Universidad de Salamanca GCA_000297395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/395/GCF_000297395.2_ASM29739v2/ na na na haploid bacteria 7325824 7321224 72.000000 0 4 50 NCBI RefSeq GCF_000297395.2-RS_2026_03_21 2026-03-21 6819 6596 94 22815450 GCF_000297415.1 PRJNA224116 SAMEA2272587 CAHT00000000.1 na 1156937 591154 Methylacidiphilum fumariolicum SolV strain=SolV na latest Contig Major Full 2012-04-18 ASM29741v1 Radbaoud University Nijmegen, Department of Microbiology GCA_000297415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/415/GCF_000297415.1_ASM29741v1/ na na na haploid bacteria 2365421 2365421 41.000000 0 109 109 NCBI RefSeq GCF_000297415.1-RS_2025_11_21 2025-11-21 2150 2065 53 na GCF_000297435.1 PRJNA224116 SAMEA2272659 CAIP00000000.1 na 1160279 1160279 Microcystis sp. T1-4 strain=T1-4 na latest Contig Major Full 2012-06-04 ASM29743v1 Genoscope CEA GCA_000297435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/435/GCF_000297435.1_ASM29743v1/ na na na haploid bacteria 4693747 4693747 43.000000 0 449 449 NCBI RefSeq GCF_000297435.1-RS_2024_08_13 2024-08-13 4661 4346 48 na GCF_000297455.1 PRJNA224116 SAMEA2272469 CAJL00000000.1 na 1159488 246432 Staphylococcus equorum subsp. equorum Mu2 strain=Mu2 na latest Contig Major Full 2012-06-21 ASM29745v1 Institut National de la Recherche Agronomique (INRA) GCA_000297455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/455/GCF_000297455.1_ASM29745v1/ na na na haploid bacteria 2927171 2927171 33.000000 0 30 30 NCBI RefSeq GCF_000297455.1-RS_2026_01_30 2026-01-30 2934 2806 66 na GCF_000297495.1 PRJNA224116 SAMN02470608 ALWX00000000.1 na 1210046 364298 Janibacter hoylei PVAS-1 strain=PVAS-1 na latest Contig Major Full 2012-09-17 ASM29749v1 National Centre for Cell Science GCA_000297495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/495/GCF_000297495.1_ASM29749v1/ na assembly from type material na haploid bacteria 3139099 3139099 71.500000 0 122 122 NCBI RefSeq GCF_000297495.1-RS_2026_03_28 2026-03-28 3326 2951 61 23144385 GCF_000297515.1 PRJNA224116 SAMN00761239 AMGE00000000.1 na 903911 470 Acinetobacter baumannii IS-143 strain=IS-143 na latest Contig Major Full 2012-09-17 gacin24v1.0 Walter Reed Army Institute of Research GCA_000297515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/515/GCF_000297515.1_gacin24v1.0/ na na na haploid bacteria 4020019 4020019 39.500000 0 93 93 NCBI RefSeq GCF_000297515.1-RS_2025_04_23 2025-04-23 3936 3735 89 26195261 GCF_000297535.1 PRJNA224116 SAMN00761231 AMGF00000000.1 na 903912 470 Acinetobacter baumannii IS-116 strain=IS-116 na latest Contig Major Full 2012-09-17 gacin24v1.0 Walter Reed Army Institute of Research GCA_000297535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/535/GCF_000297535.1_gacin24v1.0/ na na na haploid bacteria 3952511 3952511 39.000000 0 40 40 NCBI RefSeq GCF_000297535.1-RS_2025_04_15 2025-04-15 3827 3677 82 26195261 GCF_000297555.1 PRJNA224116 SAMN02470166 AMGD00000000.1 na 1231057 1231057 Paenisporosarcina sp. TG-14 strain=TG-14 na latest Contig Major Full 2012-09-17 ASM29755v1 Korea Polar Research Institute GCA_000297555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/555/GCF_000297555.1_ASM29755v1/ na na na haploid bacteria 3825949 3825949 37.000000 0 134 134 NCBI RefSeq GCF_000297555.1-RS_2025_08_27 2025-08-27 3739 3622 67 23144403 GCF_000297575.1 PRJNA224116 SAMN00761214 AMGG00000000.1 na 903913 470 Acinetobacter baumannii WC-692 strain=WC-692 na latest Contig Major Full 2012-09-17 gacin25v1.0 Walter Reed Army Institute of Research GCA_000297575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/575/GCF_000297575.1_gacin25v1.0/ na na na haploid bacteria 4183446 4183446 39.000000 0 79 79 NCBI RefSeq GCF_000297575.1-RS_2025_04_24 2025-04-24 4094 3859 107 26195261 GCF_000297595.1 PRJNA224116 SAMN00761215 AMGH00000000.1 na 903914 470 Acinetobacter baumannii IS-58 strain=IS-58 na latest Contig Major Full 2012-09-17 gacin26v1.0 Walter Reed Army Institute of Research GCA_000297595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/595/GCF_000297595.1_gacin26v1.0/ na na na haploid bacteria 4063888 4063888 39.000000 0 61 61 NCBI RefSeq GCF_000297595.1-RS_2025_04_18 2025-04-18 3991 3816 93 26195261 GCF_000297615.1 PRJNA224116 SAMN02470718 AMCE00000000.1 na 1224744 414 Methylococcus capsulatus str. Texas = ATCC 19069 strain=Texas na latest Contig Major Full 2012-09-17 ASM29761v1 Norwegian University of Life Sciences GCA_000297615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/615/GCF_000297615.1_ASM29761v1/ na assembly from type material na haploid bacteria 3259715 3259715 63.500000 0 114 114 NCBI RefSeq GCF_000297615.1-RS_2026_03_28 2026-03-28 3078 2976 61 23144383 GCF_000297635.1 PRJNA224116 SAMN02470042 ALNP00000000.1 na 1210045 1210045 Streptomyces sp. AA0539 strain=AA0539 na latest Contig Major Full 2012-09-17 ASM29763v1 Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences GCA_000297635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/635/GCF_000297635.1_ASM29763v1/ na na na haploid bacteria 5768564 5768564 73.000000 0 57 57 NCBI RefSeq GCF_000297635.1-RS_2025_08_27 2025-08-27 5264 5093 63 23144381 GCF_000297655.1 PRJNA224116 SAMN02463721 ACIF00000000.1 na 620833 860 Fusobacterium periodonticum D10 strain=D10 na latest Scaffold Major Full 2012-09-21 Fuso_PO_Taxon_201_D10_V1 Broad Institute GCA_000297655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/655/GCF_000297655.1_Fuso_PO_Taxon_201_D10_V1/ na na na haploid bacteria 2574015 2434239 28.000000 0 150 429 NCBI RefSeq GCF_000297655.1-RS_2025_08_25 2025-08-25 2556 2266 48 na GCF_000297735.1 PRJNA224116 SAMN02463953 AGXR00000000.1 na 1073387 817 Bacteroides fragilis HMW 615 strain=HMW 615 na latest Scaffold Major Full 2012-09-21 Bact_frag_HMW_615_V1 Broad Institute GCA_000297735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/735/GCF_000297735.1_Bact_frag_HMW_615_V1/ na na na haploid bacteria 5419684 5358243 43.500000 0 14 43 NCBI RefSeq GCF_000297735.1-RS_2025_12_25 2025-12-25 4448 4260 87 na GCF_000297775.1 PRJNA224116 SAMN02463870 ADMG00000000.1 na 742823 40545 Sutterella wadsworthensis 2_1_59BFAA strain=2_1_59BFAA na latest Scaffold Major Full 2012-09-21 Sutt_wads_2_1_59BFAA_V1 Broad Institute GCA_000297775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/775/GCF_000297775.1_Sutt_wads_2_1_59BFAA_V1/ na na na haploid bacteria 2725870 2665453 61.500000 0 11 59 NCBI RefSeq GCF_000297775.1-RS_2025_03_14 2025-03-14 2461 2336 81 na GCF_000297795.2 PRJNA224116 SAMEA2272804 CAJZ00000000.1 na 883169 29321 Corynebacterium otitidis ATCC 51513 strain=ATCC 51513 na latest Scaffold Major Full 2012-10-12 ASM29779v2 Center for Biotechnology GCA_000297795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/795/GCF_000297795.2_ASM29779v2/ na assembly from type material na haploid bacteria 2154859 2077086 71.500000 0 32 250 NCBI RefSeq GCF_000297795.2-RS_2025_12_23 2025-12-23 1918 1787 58 na GCF_000297815.1 PRJNA224116 SAMN02463961 AMGT00000000.1 na 1125694 584 Proteus mirabilis WGLW6 strain=WGLW6 na latest Scaffold Major Full 2012-09-21 Prot_mira_WGLW6_V1 Broad Institute GCA_000297815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/815/GCF_000297815.1_Prot_mira_WGLW6_V1/ na na na haploid bacteria 4101891 4049051 39.000000 0 8 54 NCBI RefSeq GCF_000297815.1-RS_2025_07_30 2025-07-30 3818 3684 84 na GCF_000297835.1 PRJNA224116 SAMN02463960 AMGU00000000.1 na 1125693 584 Proteus mirabilis WGLW4 strain=WGLW4 na latest Scaffold Major Full 2012-09-21 Prot_mira_WGLW4_V1 Broad Institute GCA_000297835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/835/GCF_000297835.1_Prot_mira_WGLW4_V1/ na na na haploid bacteria 3960485 3920397 38.500000 0 2 36 NCBI RefSeq GCF_000297835.1-RS_2026_01_30 2026-01-30 3599 3457 94 na GCF_000297855.1 PRJNA224116 SAMN02596776 AGZK00000000.1 na 883153 76832 Myroides odoratimimus CCUG 3837 strain=CCUG 3837 na latest Scaffold Major Full 2012-09-21 Myro_odor_CCUG_3837_V1 Broad Institute GCA_000297855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/855/GCF_000297855.1_Myro_odor_CCUG_3837_V1/ na na na haploid bacteria 4136542 4041097 34.000000 0 4 46 NCBI RefSeq GCF_000297855.1-RS_2025_12_16 2025-12-16 3609 3491 86 na GCF_000297875.1 PRJNA224116 SAMN02463912 AGZJ00000000.1 na 883155 256 Myroides odoratus CIP 103059 strain=CIP 103059 na latest Scaffold Major Full 2012-09-21 Myro_odor_CIP103059_G12587_V1 Broad Institute GCA_000297875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/875/GCF_000297875.1_Myro_odor_CIP103059_G12587_V1/ na na na haploid bacteria 4227641 4188881 36.000000 0 14 98 NCBI RefSeq GCF_000297875.1-RS_2025_12_04 2025-12-04 3819 3672 85 na GCF_000297915.1 PRJNA224116 SAMN02596915 AKAQ00000000.1 na 1168588 470 Acinetobacter baumannii Ab11111 strain=Ab11111 na latest Scaffold Major Full 2012-09-21 Acin_baum_Ab11111_V1 Broad Institute GCA_000297915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/915/GCF_000297915.1_Acin_baum_Ab11111_V1/ na na na haploid bacteria 4080331 4062506 39.000000 0 10 26 NCBI RefSeq GCF_000297915.1-RS_2025_12_30 2025-12-30 3905 3726 103 na GCF_000297935.1 PRJNA224116 SAMN02596917 AKAS00000000.1 na 1168590 470 Acinetobacter baumannii Ab33333 strain=Ab33333 na latest Scaffold Major Full 2012-09-21 Acin_baum_Ab33333_V1 Broad Institute GCA_000297935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/935/GCF_000297935.1_Acin_baum_Ab33333_V1/ na na na haploid bacteria 3835030 3833321 39.000000 0 11 16 NCBI RefSeq GCF_000297935.1-RS_2025_12_30 2025-12-30 3626 3487 101 na GCF_000297955.1 PRJNA224116 SAMN02596918 AKAT00000000.1 na 1168591 470 Acinetobacter baumannii Ab44444 strain=Ab44444 na latest Scaffold Major Full 2012-09-21 Acin_baum_Ab44444_V1 Broad Institute GCA_000297955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/955/GCF_000297955.1_Acin_baum_Ab44444_V1/ na na na haploid bacteria 3801338 3769310 39.000000 0 6 31 NCBI RefSeq GCF_000297955.1-RS_2026_02_09 2026-02-09 3642 3461 86 na GCF_000297975.1 PRJNA224116 SAMN02463948 AGWT00000000.1 na 1073382 654 Aeromonas veronii AER39 strain=AER39 na latest Scaffold Major Full 2012-09-21 Aero_vero_AER39_V1 Broad Institute GCA_000297975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/975/GCF_000297975.1_Aero_vero_AER39_V1/ na na na haploid bacteria 4420590 4385090 59.000000 0 4 36 NCBI RefSeq GCF_000297975.1-RS_2026_02_15 2026-02-15 4065 3905 133 na GCF_000297995.1 PRJNA224116 SAMN02463950 AGWV00000000.1 na 1073384 654 Aeromonas veronii AER397 strain=AER397 na latest Scaffold Major Full 2012-09-21 Aero_vero_AER397_V1 Broad Institute GCA_000297995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/297/995/GCF_000297995.1_Aero_vero_AER397_V1/ na na na haploid bacteria 4496658 4449314 59.000000 0 5 22 NCBI RefSeq GCF_000297995.1-RS_2026_02_15 2026-02-15 4101 3961 113 na GCF_000298015.1 PRJNA224116 SAMN02463949 AGWU00000000.1 na 1073383 654 Aeromonas veronii AMC34 strain=AMC34 na latest Scaffold Major Full 2012-09-21 Aero_vero_AMC34_V1 Broad Institute GCA_000298015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/015/GCF_000298015.1_Aero_vero_AMC34_V1/ na na na haploid bacteria 4578728 4542842 58.500000 0 1 24 NCBI RefSeq GCF_000298015.1-RS_2026_02_15 2026-02-15 4214 4098 94 na GCF_000298035.1 PRJNA224116 SAMN02463951 AGWW00000000.1 na 1073385 654 Aeromonas veronii AMC35 strain=AMC35 na latest Scaffold Major Full 2012-09-21 Aero_vero_AMC35_V1 Broad Institute GCA_000298035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/035/GCF_000298035.1_Aero_vero_AMC35_V1/ na na na haploid bacteria 4565607 4540907 58.500000 0 2 20 NCBI RefSeq GCF_000298035.1-RS_2026_02_15 2026-02-15 4145 4000 120 na GCF_000298075.1 PRJNA224116 SAMN02472049 AKGE00000000.1 na 1189613 555791 Staphylococcus massiliensis CCUG 55927 strain=CCUG 55927 na latest Scaffold Major Full 2012-09-21 ASM29807v1 URMITE GCA_000298075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/075/GCF_000298075.1_ASM29807v1/ na assembly from type material na haploid bacteria 2366595 2321067 36.500000 0 8 71 NCBI RefSeq GCF_000298075.1-RS_2026_03_28 2026-03-28 2282 2156 65 23209235 GCF_000298095.1 PRJNA224116 SAMN02603610 na na 1232724 1767 Mycobacterium intracellulare subsp. intracellulare MTCC 9506 strain=MTCC 9506 na latest Complete Genome Major Full 2012-09-18 ASM29809v1 MIP genome sequencing consortium GCA_000298095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/095/GCF_000298095.1_ASM29809v1/ na na na haploid bacteria 5589007 5589007 68.000000 1 1 1 NCBI RefSeq GCF_000298095.1-RS_2026_04_03 2026-04-03 5224 5061 52 17912347;22965120 GCF_000298115.2 PRJNA224116 SAMN02603054 na na 1071400 1581 Lentilactobacillus buchneri subsp. silagei CD034 strain=CD034 na latest Complete Genome Major Full 2012-09-18 ASM29811v2 CeBiTec GCA_000298115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/115/GCF_000298115.2_ASM29811v2/ na na na haploid bacteria 2563168 2563168 44.000000 4 4 4 NCBI RefSeq GCF_000298115.2-RS_2026_01_06 2026-01-06 2492 2387 79 21907734;22465289 GCF_000298175.1 PRJNA224116 SAMD00041799 BAGZ00000000.1 na 1184607 100225 Austwickia chelonae NBRC 105200 strain=NBRC 105200 na latest Contig Major Full 2012-09-05 ASM29817v1 National Institute of Technology and Evaluation GCA_000298175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/175/GCF_000298175.1_ASM29817v1/ na assembly from type material na haploid bacteria 3541124 3541124 66.000000 0 33 33 NCBI RefSeq GCF_000298175.1-RS_2025_12_23 2025-12-23 3122 3049 51 na GCF_000298195.1 PRJNA224116 SAMD00041828 BAHC00000000.1 reference genome 1108045 83341 Gordonia rhizosphera NBRC 16068 strain=NBRC 16068 na latest Contig Major Full 2012-09-05 ASM29819v1 National Institute of Technology and Evaluation (NITE) GCA_000298195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/195/GCF_000298195.1_ASM29819v1/ na assembly from type material na haploid bacteria 6434991 6434991 67.000000 0 261 261 NCBI RefSeq GCF_000298195.1-RS_2025_09_02 2025-09-02 5980 5757 54 na GCF_000298215.1 PRJNA224116 SAMD00041770 BAHD00000000.1 na 1184609 111564 Kineosphaera limosa NBRC 100340 strain=NBRC 100340 na latest Contig Major Full 2012-09-05 ASM29821v1 National Institute of Technology and Evaluation GCA_000298215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/215/GCF_000298215.1_ASM29821v1/ na assembly from type material na haploid bacteria 4847237 4847237 70.500000 0 166 166 NCBI RefSeq GCF_000298215.1-RS_2025_09_02 2025-09-02 4475 4312 54 na GCF_000298235.1 PRJNA224116 SAMD00041807 BAHE00000000.1 reference genome 1208314 168480 Gordonia namibiensis NBRC 108229 strain=NBRC 108229 na latest Contig Major Full 2012-09-07 ASM29823v1 National Institute of Technology and Evaluation GCA_000298235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/235/GCF_000298235.1_ASM29823v1/ na assembly from type material na haploid bacteria 4941607 4941607 67.500000 0 67 67 NCBI RefSeq GCF_000298235.1-RS_2025_08_08 2025-08-08 4471 4378 55 na GCF_000298255.1 PRJNA224116 SAMN02469441 AMCK00000000.1 reference genome 1224748 412383 Solibacillus isronensis B3W22 strain=B3W22 na latest Contig Major Full 2012-09-18 ASM29825v1 Centre for Cellular and Molecular Biology GCA_000298255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/255/GCF_000298255.1_ASM29825v1/ na assembly from type material na haploid bacteria 4019895 4019895 39.000000 0 177 177 NCBI RefSeq GCF_000298255.1-RS_2025_08_04 2025-08-04 4047 3884 108 23144382 GCF_000298295.1 PRJNA224116 SAMN02469435 AMGM00000000.1 reference genome 1225176 645110 Cecembia lonarensis LW9 strain=LW9 na latest Contig Major Full 2012-09-18 ASM29829v1 Centre for Cellular and Molecular Biology GCA_000298295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/295/GCF_000298295.1_ASM29829v1/ na assembly from type material na haploid bacteria 4842844 4842844 41.000000 0 358 358 NCBI RefSeq GCF_000298295.1-RS_2025_08_01 2025-08-01 4187 4092 49 23144386 GCF_000298315.2 PRJNA224116 SAMN02469448 AEYE00000000.2 na 990285 1120045 Rhizobium grahamii CCGE 502 strain=CCGE 502 na latest Scaffold Major Full 2013-06-18 ASM29831v2 Universidad Nacional Autonoma de Mex GCA_000298315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/315/GCF_000298315.2_ASM29831v2/ na assembly from type material na haploid bacteria 7146037 7146037 59.500000 2 80 80 NCBI RefSeq GCF_000298315.2-RS_2025_08_07 2025-08-07 6969 6616 62 23144400 GCF_000298385.1 PRJNA224116 SAMN02603414 na na 1239881 91844 Candidatus Portiera aleyrodidarum BT-QVLC strain=BT-QVLC na latest Complete Genome Major Full 2012-09-19 ASM29838v1 Instituto Cavanilles de Biodiversitat i Biologia Evolutiva (University of Valencia, Spain) GCA_000298385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/385/GCF_000298385.1_ASM29838v1/ na na na haploid bacteria 357472 357472 26.000000 1 1 1 NCBI RefSeq GCF_000298385.1-RS_2026_02_24 2026-02-24 297 252 38 23144402 GCF_000298415.1 PRJNA224116 SAMN02604207 na na 1218353 83554 Chlamydia psittaci GR9 strain=GR9 na latest Complete Genome Major Full 2012-09-19 ASM29841v1 University of Maryland, Baltimore GCA_000298415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/415/GCF_000298415.1_ASM29841v1/ na na na haploid bacteria 1147152 1147152 39.000000 1 1 1 NCBI RefSeq GCF_000298415.1-RS_2026_03_28 2026-03-28 1011 934 44 23209198 GCF_000298435.2 PRJNA224116 SAMN02604208 na na 1218354 83554 Chlamydia psittaci MN strain=MN na latest Complete Genome Major Full 2012-09-21 ASM29843v2 University of Maryland, Baltimore GCA_000298435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/435/GCF_000298435.2_ASM29843v2/ na na na haploid bacteria 1175981 1175981 39.000000 2 2 2 NCBI RefSeq GCF_000298435.2-RS_2026_03_28 2026-03-28 1036 955 44 23209198 GCF_000298475.2 PRJNA224116 SAMN02604210 na na 1218356 83554 Chlamydia psittaci WS/RT/E30 strain=WS/RT/E30 na latest Complete Genome Major Full 2012-09-21 ASM29847v2 University of Maryland, Baltimore GCA_000298475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/475/GCF_000298475.2_ASM29847v2/ na na na haploid bacteria 1148342 1148342 39.000000 2 2 2 NCBI RefSeq GCF_000298475.2-RS_2026_03_28 2026-03-28 1015 915 44 23209198 GCF_000298495.2 PRJNA224116 SAMN02604211 na na 1218357 83554 Chlamydia psittaci M56 strain=M56 na latest Complete Genome Major Full 2012-09-21 ASM29849v2 University of Maryland, Baltimore GCA_000298495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/495/GCF_000298495.2_ASM29849v2/ na na na haploid bacteria 1168938 1168938 39.000000 2 2 2 NCBI RefSeq GCF_000298495.2-RS_2026_01_02 2026-01-02 1037 967 44 23209198 GCF_000298515.2 PRJNA224116 SAMN02604212 na na 1218358 83554 Chlamydia psittaci WC strain=WC na latest Complete Genome Major Full 2012-09-21 ASM29851v2 University of Maryland, Baltimore GCA_000298515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/515/GCF_000298515.2_ASM29851v2/ na na na haploid bacteria 1179818 1179818 39.000000 2 2 2 NCBI RefSeq GCF_000298515.2-RS_2026_03_28 2026-03-28 1040 958 44 23209198 GCF_000298555.2 PRJNA224116 SAMN02604214 na na 1050221 83554 Chlamydia psittaci NJ1 strain=NJ1 na latest Complete Genome Major Full 2012-09-21 ASM29855v2 University of Maryland, Baltimore GCA_000298555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/555/GCF_000298555.2_ASM29855v2/ na na na haploid bacteria 1168986 1168986 39.000000 2 2 2 NCBI RefSeq GCF_000298555.2-RS_2026_03_28 2026-03-28 1030 963 44 23209198 GCF_000298575.1 PRJNA224116 SAMN02469334 AMOZ00000000.1 na 1229903 36855 Brucella canis 118 strain=118 na latest Contig Major Full 2012-09-19 V1.0 for Brucella_canis_str_118 Beijing Institute of Disease Control and Prevention GCA_000298575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/575/GCF_000298575.1_V1.0_for_Brucella_canis_str_118/ na na na haploid bacteria 3234827 3234827 57.500000 0 154 154 NCBI RefSeq GCF_000298575.1-RS_2026_04_23 2026-04-23 3164 2982 49 23144418 GCF_000298595.1 PRJNA224116 SAMN02469341 AMPA00000000.1 na 1229906 29459 Brucella melitensis bv. 1 str. 133 strain=133 na latest Contig Major Full 2012-09-19 V1.0 of Brucella_melitensis_bv_1_str_ 133 Beijing Institute of Diseae Control and Prevention GCA_000298595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/595/GCF_000298595.1_V1.0_of_Brucella_melitensis_bv_1_str_133/ na na na haploid bacteria 3265383 3265383 57.500000 0 173 173 NCBI RefSeq GCF_000298595.1-RS_2026_05_01 2026-05-01 3214 2982 50 23209199 GCF_000298615.1 PRJNA224116 SAMN02469335 AMPB00000000.1 na 1229904 29459 Brucella melitensis bv. 3 str. 128 strain=128 na latest Contig Major Full 2012-09-19 V1.0 of Brucella_melitensis_bv.3_str_128 Beijing Institute of Disease Control and Prevention GCA_000298615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/615/GCF_000298615.1_V1.0_of_Brucella_melitensis_bv.3_str_128/ na na na haploid bacteria 3276288 3276288 57.500000 0 123 123 NCBI RefSeq GCF_000298615.1-RS_2026_04_26 2026-04-26 3225 3008 50 23209219 GCF_000298635.1 PRJNA224116 SAMN02469348 AMPC00000000.1 na 1229907 235 Brucella abortus bv. 1 str. 134 strain=134 na latest Contig Major Full 2012-09-19 V1.0 of Brucella_abortus_bv.1_str_134 Beijing Institute of Disease Control and Prevention GCA_000298635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/635/GCF_000298635.1_V1.0_of_Brucella_abortus_bv.1_str_134/ na na na haploid bacteria 3248564 3248564 57.500000 0 141 141 NCBI RefSeq GCF_000298635.1-RS_2026_05_17 2026-05-17 3224 2991 52 23144404 GCF_000298655.1 PRJNA224116 SAMN02470584 AMBP00000000.1 na 1169410 747 Pasteurella multocida subsp. gallicida X73 strain=X73 na latest Chromosome Major Full 2012-09-24 X73v1 none GCA_000298655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/655/GCF_000298655.1_X73v1/ na na na haploid bacteria 2266799 2264399 40.500000 1 1 24 NCBI RefSeq GCF_000298655.1-RS_2026_01_30 2026-01-30 2143 2073 59 23405337 GCF_000298675.1 PRJNA224116 SAMN02470591 AMBQ00000000.1 na 1169409 747 Pasteurella multocida subsp. gallicida P1059 strain=P1059 na latest Chromosome Major Full 2012-09-24 P1059v1 none GCA_000298675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/675/GCF_000298675.1_P1059v1/ na na na haploid bacteria 2307912 2304012 40.500000 1 1 39 NCBI RefSeq GCF_000298675.1-RS_2026_01_30 2026-01-30 2193 2128 58 23405337 GCF_000298695.2 PRJNA224116 SAMN02470258 AJRC00000000.2 na 1169672 1169672 Streptococcus sp. GMD3S strain=GMD3S na latest Contig Major Full 2013-02-23 ASM29869v2 Los Alamos National Laboratory GCA_000298695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/695/GCF_000298695.2_ASM29869v2/ na na na haploid bacteria 2033272 2033272 41.000000 0 81 81 NCBI RefSeq GCF_000298695.2-RS_2025_08_27 2025-08-27 2028 1923 45 23493677 GCF_000298715.2 PRJNA224116 SAMN02470267 AJRG00000000.2 na 1169674 1169674 Streptococcus sp. GMD5S strain=GMD5S na latest Contig Major Full 2013-01-08 ASM29871v2 Los Alamos National Laboratory GCA_000298715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/715/GCF_000298715.2_ASM29871v2/ na na na haploid bacteria 2027048 2027048 41.000000 0 77 77 NCBI RefSeq GCF_000298715.2-RS_2025_08_27 2025-08-27 1994 1913 34 23493677 GCF_000298875.1 PRJNA224116 SAMN02603178 na reference genome 1229756 1244 Leuconostoc gelidum JB7 strain=JB7 na latest Complete Genome Major Full 2012-09-21 ASM29887v1 Department of Life Science, Chung-Ang University, Republic of Korea GCA_000298875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/298/875/GCF_000298875.1_ASM29887v1/ na na na haploid bacteria 1893499 1893499 36.500000 1 1 1 NCBI RefSeq GCF_000298875.1-RS_2025_12_13 2025-12-13 1882 1782 81 23144409 GCF_000299015.1 PRJNA224116 SAMN02299431 na na 697283 1313 Streptococcus pneumoniae gamPNI0373 strain=gamPNI0373 na latest Complete Genome Major Full 2012-09-21 ASM29901v1 WashU GCA_000299015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/015/GCF_000299015.1_ASM29901v1/ na na na haploid bacteria 2064154 2064154 40.000000 1 1 1 NCBI RefSeq GCF_000299015.1-RS_2025_12_21 2025-12-21 2148 1907 72 na GCF_000299035.1 PRJNA224116 SAMN02469796 AKCS00000000.1 reference genome 1150157 1150157 Bacillus bingmayongensis strain=FJAT-13831 na latest Scaffold Major Full 2012-09-24 ASM29903v1 Fujian Academy of Agriculture Sciences, China GCA_000299035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/035/GCF_000299035.1_ASM29903v1/ na assembly from type material na haploid bacteria 5477100 5471712 35.500000 0 63 88 NCBI RefSeq GCF_000299035.1-RS_2026_04_07 2026-04-07 5678 5215 95 23144388 GCF_000299135.1 PRJNA224116 SAMN02603155 na na 1203670 1311 Streptococcus agalactiae GD201008-001 strain=GD201008-001 na latest Complete Genome Major Full 2012-09-24 ASM29913v1 College of Veterinary Medicine, Nanjing Agricultural University GCA_000299135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/135/GCF_000299135.1_ASM29913v1/ na na na haploid bacteria 2063112 2063112 35.500000 1 1 1 NCBI RefSeq GCF_000299135.1-RS_2026_03_28 2026-03-28 2080 1906 102 23144401 GCF_000299175.2 PRJNA224116 SAMN02471466 AMPN00000000.2 na 1195457 1195457 Streptomyces sp. SM8 strain=SM8 na latest Scaffold Major Full 2017-12-05 ASM29917v2 Environmental Research Institute, University College Cork, Ireland GCA_000299175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/175/GCF_000299175.2_ASM29917v2/ na na na haploid bacteria 7145211 7110611 73.500000 0 11 357 NCBI RefSeq GCF_000299175.2-RS_2025_08_24 2025-08-24 6565 6084 70 na GCF_000299235.1 PRJNA224116 SAMN02603870 na na 1048260 178606 Leptospirillum ferriphilum ML-04 strain=ML-04 na latest Complete Genome Major Full 2012-09-25 ASM29923v1 State Key Lab of Microbial Technology, Shandong University, Jinan, China GCA_000299235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/235/GCF_000299235.1_ASM29923v1/ na na na haploid bacteria 2406157 2406157 54.500000 1 1 1 NCBI RefSeq GCF_000299235.1-RS_2025_02_21 2025-02-21 2394 2295 59 22203551 GCF_000299255.1 PRJNA224116 SAMN01831189 na na 1134782 562 Escherichia coli O104:H4 str. 2009EL-2050 strain=2009EL-2050 na latest Complete Genome Major Full 2012-09-25 ASM29925v1 Los Alamos National Laboratory GCA_000299255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/255/GCF_000299255.1_ASM29925v1/ na na na haploid bacteria 5438174 5438174 50.500000 4 4 4 NCBI RefSeq GCF_000299255.1-RS_2025_05_23 2025-05-23 5404 4978 128 23133618 GCF_000299295.2 PRJNA224116 SAMN02469590 AMPQ00000000.1 na 1230341 1230341 Salimicrobium jeotgali strain=MJ3 na latest Contig Minor Full 2012-09-26 ASM29929v2 Chung Ang university, Seoul, Korea GCA_000299295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/295/GCF_000299295.2_ASM29929v2/ na assembly from type material na haploid bacteria 2712396 2712396 46.500000 0 44 44 NCBI RefSeq GCF_000299295.2-RS_2026_03_21 2026-03-21 2816 2724 74 23144427 GCF_000299335.2 PRJNA224116 SAMN02471159 na reference genome 391936 1306787 Isoalcanivorax pacificus W11-5 strain=W11-5 na latest Complete Genome Major Full 2015-01-09 ASM29933v2 The Third Institute of State Oceanic Administration (SOA), China. GCA_000299335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/335/GCF_000299335.2_ASM29933v2/ na assembly from type material na haploid bacteria 4168427 4168427 62.500000 1 1 1 NCBI RefSeq GCF_000299335.2-RS_2026_03_29 2026-03-29 3797 3726 57 23209202 GCF_000299355.1 PRJNA224116 SAMN02603272 na reference genome 1128398 1556 Gottschalkia acidurici 9a strain=9a na latest Complete Genome Major Full 2012-09-27 ASM29935v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000299355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/355/GCF_000299355.1_ASM29935v1/ na assembly from type material na haploid bacteria 3108248 3108248 30.000000 2 2 2 NCBI RefSeq GCF_000299355.1-RS_2026_03_30 2026-03-30 3086 2939 104 23240052 GCF_000299365.1 PRJNA224116 SAMN02603137 na reference genome 1229908 1510466 Candidatus Nitrosopumilus koreensis AR1 strain=AR1 na latest Complete Genome Major Full 2012-09-27 ASM29936v1 Chungbuk National University GCA_000299365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/365/GCF_000299365.1_ASM29936v1/ na na na haploid archaea 1639964 1639964 34.000000 1 1 1 NCBI RefSeq GCF_000299365.1-RS_2026_03_30 2026-03-30 2045 1969 47 23209206 GCF_000299395.1 PRJNA224116 SAMN02603138 na reference genome 1229909 1229909 Candidatus Nitrosopumilus sediminis strain=AR2 na latest Complete Genome Major Full 2012-09-27 ASM29939v1 Chungbuk National University GCA_000299395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/395/GCF_000299395.1_ASM29939v1/ na na na haploid archaea 1690905 1690905 33.500000 1 1 1 NCBI RefSeq GCF_000299395.1-RS_2026_03_30 2026-03-30 2128 2069 48 23209211 GCF_000299415.1 PRJNA224116 SAMN01730125 AMPG00000000.1 na 1231054 41950 Candidatus Neomicrothrix parvicella Bio17-1 strain=Bio17-1 na latest Contig Major Full 2012-09-27 ASM29941v1 Luxembourg Centre for Systems Biomedecine GCA_000299415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/415/GCF_000299415.1_ASM29941v1/ na na na haploid bacteria 4202850 4202850 66.500000 0 13 13 NCBI RefSeq GCF_000299415.1-RS_2026_03_31 2026-03-31 3960 3832 56 23144412 GCF_000299435.1 PRJNA224116 SAMN02603748 na na 1087448 132920 Exiguobacterium antarcticum B7 strain=Eab7 na latest Complete Genome Major Full 2012-09-27 ASM29943v1 Rede Paraense de Genomica e Proteomica GCA_000299435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/435/GCF_000299435.1_ASM29943v1/ na na na haploid bacteria 2815863 2815863 47.500000 1 1 1 NCBI RefSeq GCF_000299435.1-RS_2026_02_06 2026-02-06 2973 2809 98 23144424 GCF_000299455.1 PRJNA224116 SAMN01831188 na na 1133852 562 Escherichia coli O104:H4 str. 2011C-3493 strain=2011C-3493 na latest Complete Genome Major Full 2012-09-27 ASM29945v1 Los Alamos National Laboratory GCA_000299455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/455/GCF_000299455.1_ASM29945v1/ na na na haploid bacteria 5437407 5437407 50.500000 4 4 4 NCBI RefSeq GCF_000299455.1-RS_2025_05_18 2025-05-18 5391 4974 123 23133618 GCF_000299475.1 PRJNA224116 SAMN01831190 na na 1133853 562 Escherichia coli O104:H4 str. 2009EL-2071 strain=2009EL-2071 na latest Complete Genome Major Full 2012-09-27 ASM29947v1 Los Alamos National Laboratory GCA_000299475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/475/GCF_000299475.1_ASM29947v1/ na na na haploid bacteria 5389708 5389708 50.500000 3 3 3 NCBI RefSeq GCF_000299475.1-RS_2025_05_23 2025-05-23 5355 4918 128 23133618 GCF_000299495.2 PRJNA224116 SAMN02469953 AMBR00000000.1 na 1225781 666 Vibrio cholerae VC35 strain=VC35 na latest Contig Minor Full 2012-09-27 VC35.1 Institute of Biological Science GCA_000299495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/495/GCF_000299495.2_VC35.1/ na na na haploid bacteria 3912714 3912714 47.500000 0 103 103 NCBI RefSeq GCF_000299495.2-RS_2026_03_21 2026-03-21 3519 3415 58 23209200 GCF_000299515.2 PRJNA224116 SAMN02469952 AMBS00000000.1 na 1225783 666 Vibrio cholerae VC1761 strain=VC1761 na latest Contig Minor Full 2012-09-27 VC1761.1 Institute of Biological Science GCA_000299515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/515/GCF_000299515.2_VC1761.1/ na na na haploid bacteria 4011457 4011457 47.500000 0 149 149 NCBI RefSeq GCF_000299515.2-RS_2026_02_17 2026-02-17 3659 3527 80 na GCF_000299535.2 PRJNA224116 SAMN02469954 AMBT00000000.1 na 1225782 666 Vibrio cholerae VC4370 strain=VC4370 na latest Contig Minor Full 2012-09-27 VC4370.1 Institute of Biological Science GCA_000299535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/535/GCF_000299535.2_VC4370.1/ na na na haploid bacteria 3986677 3986677 47.500000 0 145 145 NCBI RefSeq GCF_000299535.2-RS_2026_02_17 2026-02-17 3627 3518 63 na GCF_000299575.1 PRJNA224116 SAMN02471016 AMGO00000000.1 reference genome 1231392 1046117 Oceaniovalibus guishaninsula JLT2003 strain=JLT2003 na latest Contig Major Full 2012-09-27 ASM29957v1 State Key Laboratory for Marine Environmental Science, Xiamen University GCA_000299575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/575/GCF_000299575.1_ASM29957v1/ na assembly from type material na haploid bacteria 2897133 2897133 67.500000 0 68 68 NCBI RefSeq GCF_000299575.1-RS_2026_03_28 2026-03-28 2929 2827 50 23144420 GCF_000299595.1 PRJNA224116 SAMN02470080 AMPL00000000.1 na 1207542 1681 Bifidobacterium bifidum LMG 13195 strain=LMG 13195 na latest Contig Major Full 2012-09-27 ASM29959v1 IPLA-CSIC GCA_000299595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/595/GCF_000299595.1_ASM29959v1/ na na na haploid bacteria 2283145 2283145 62.500000 0 164 164 NCBI RefSeq GCF_000299595.1-RS_2026_03_20 2026-03-20 2004 1831 60 23209243 GCF_000299615.1 PRJNA224116 SAMN02470577 AMPK00000000.1 na 1177186 492670 Bacillus velezensis M27 strain=M27 na latest Contig Major Full 2012-09-27 ASM29961v1 National Academy of Agricultural Science, RDA GCA_000299615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/615/GCF_000299615.1_ASM29961v1/ na na na haploid bacteria 3860959 3860959 46.500000 0 21 21 NCBI RefSeq GCF_000299615.1-RS_2026_03_20 2026-03-20 3835 3697 63 23209201 GCF_000299635.1 PRJNA224116 SAMN02469425 AMQV00000000.1 na 1219061 672 Vibrio vulnificus NBRC 15645 = ATCC 27562 strain=ATCC 27562 na latest Contig Major Full 2012-09-27 ASM29963v1 Zhejiang University GCA_000299635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/635/GCF_000299635.1_ASM29963v1/ na assembly from type material na haploid bacteria 4327239 4327239 46.500000 0 194 194 NCBI RefSeq GCF_000299635.1-RS_2025_08_06 2025-08-06 3865 3720 82 23209214 GCF_000299655.1 PRJNA224116 SAMN02470994 AMGR00000000.1 na 1223564 470 Acinetobacter baumannii ZWS1122 strain=ZWS1122 na latest Contig Major Full 2012-09-27 ASM29965v1 Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University GCA_000299655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/655/GCF_000299655.1_ASM29965v1/ na na na haploid bacteria 3937258 3937258 39.000000 0 60 60 NCBI RefSeq GCF_000299655.1-RS_2026_01_10 2026-01-10 3797 3660 68 23209232 GCF_000299675.1 PRJNA224116 SAMN02470995 AMGS00000000.1 na 1224141 470 Acinetobacter baumannii ZWS1219 strain=ZWS1219 na latest Contig Major Full 2012-09-27 ASM29967v1 Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University GCA_000299675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/675/GCF_000299675.1_ASM29967v1/ na na na haploid bacteria 3964728 3964728 39.000000 0 70 70 NCBI RefSeq GCF_000299675.1-RS_2026_01_12 2026-01-12 3823 3662 89 23209232 GCF_000299695.1 PRJNA224116 SAMN00997706 AMOR00000000.1 na 1145111 210 Helicobacter pylori R030b strain=R030b na latest Contig Major Full 2012-09-27 ASM29969v1 IGS GCA_000299695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/695/GCF_000299695.1_ASM29969v1/ na na na haploid bacteria 1610617 1610617 39.000000 0 11 11 NCBI RefSeq GCF_000299695.1-RS_2026_04_24 2026-04-24 1549 1424 51 23661595 GCF_000299715.1 PRJNA224116 SAMN00997707 AMOT00000000.1 na 1145113 210 Helicobacter pylori R036d strain=R036d na latest Contig Major Full 2012-09-27 ASM29971v1 IGS GCA_000299715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/715/GCF_000299715.1_ASM29971v1/ na na na haploid bacteria 1640262 1640262 39.000000 0 8 8 NCBI RefSeq GCF_000299715.1-RS_2026_01_11 2026-01-11 1586 1437 47 na GCF_000299735.1 PRJNA224116 SAMN00997708 AMOU00000000.1 na 1145114 210 Helicobacter pylori R037c strain=R037c na latest Contig Major Full 2012-09-27 ASM29973v1 IGS GCA_000299735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/735/GCF_000299735.1_ASM29973v1/ na na na haploid bacteria 1614130 1614130 39.000000 0 9 9 NCBI RefSeq GCF_000299735.1-RS_2026_06_24 2026-06-24 1557 1418 47 23661595 GCF_000299755.1 PRJNA224116 SAMN00997709 AMOV00000000.1 na 1145115 210 Helicobacter pylori R038b strain=R038b na latest Contig Major Full 2012-09-27 ASM29975v1 IGS GCA_000299755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/755/GCF_000299755.1_ASM29975v1/ na na na haploid bacteria 1632757 1632757 39.000000 0 14 14 NCBI RefSeq GCF_000299755.1-RS_2026_04_23 2026-04-23 1561 1441 49 23661595 GCF_000299775.1 PRJNA224116 SAMN00997710 AMOW00000000.1 na 1145116 210 Helicobacter pylori R046Wa strain=R046Wa na latest Contig Major Full 2012-09-27 ASM29977v1 IGS GCA_000299775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/775/GCF_000299775.1_ASM29977v1/ na na na haploid bacteria 1585443 1585443 39.000000 0 8 8 NCBI RefSeq GCF_000299775.1-RS_2026_04_30 2026-04-30 1537 1400 48 23661595 GCF_000299795.1 PRJNA224116 SAMN00997711 AMOX00000000.1 na 1145117 210 Helicobacter pylori R055a strain=R055a na latest Contig Major Full 2012-09-27 ASM29979v1 IGS GCA_000299795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/795/GCF_000299795.1_ASM29979v1/ na na na haploid bacteria 1631090 1631090 39.000000 0 16 16 NCBI RefSeq GCF_000299795.1-RS_2026_01_11 2026-01-11 1587 1436 49 na GCF_000299815.1 PRJNA224116 SAMN00997712 AMOY00000000.1 na 1145118 210 Helicobacter pylori R056a strain=R056a na latest Contig Major Full 2012-09-27 ASM29981v1 IGS GCA_000299815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/815/GCF_000299815.1_ASM29981v1/ na na na haploid bacteria 1646110 1646110 39.000000 0 13 13 NCBI RefSeq GCF_000299815.1-RS_2026_04_29 2026-04-29 1589 1456 45 23661595 GCF_000299835.1 PRJNA224116 SAMN00997713 AMOS00000000.1 na 1145112 210 Helicobacter pylori R32b strain=R32b na latest Contig Major Full 2012-09-27 ASM29983v1 IGS GCA_000299835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/835/GCF_000299835.1_ASM29983v1/ na na na haploid bacteria 1582461 1582461 39.000000 0 10 10 NCBI RefSeq GCF_000299835.1-RS_2026_04_26 2026-04-26 1558 1435 44 23661595 GCF_000299855.1 PRJNA224116 SAMN00997705 AMOQ00000000.1 na 1145110 210 Helicobacter pylori R018c strain=R018c na latest Contig Major Full 2012-09-27 ASM29985v1 IGS GCA_000299855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/855/GCF_000299855.1_ASM29985v1/ na na na haploid bacteria 1646836 1646836 39.000000 0 15 15 NCBI RefSeq GCF_000299855.1-RS_2026_02_17 2026-02-17 1594 1451 47 na GCF_000299875.1 PRJNA224116 SAMN02471168 AMRK00000000.1 na 1208323 875171 Celeribacter baekdonensis B30 strain=B30 na latest Contig Major Full 2012-09-27 ASM29987v1 The Third Institute of State Oceanic Administration (SOA) GCA_000299875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/875/GCF_000299875.1_ASM29987v1/ na na na haploid bacteria 4333597 4333597 58.500000 0 44 44 NCBI RefSeq GCF_000299875.1-RS_2025_08_25 2025-08-25 4284 4168 57 na GCF_000299895.1 PRJNA224116 SAMN02471167 AMRG00000000.1 reference genome 740709 1207041 Idiomarina xiamenensis 10-D-4 strain=10-D-4 na latest Contig Major Full 2012-09-27 ASM29989v1 The Third Institute of State Oceanic Administration (SOA) GCA_000299895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/895/GCF_000299895.1_ASM29989v1/ na assembly from type material na haploid bacteria 2899282 2899282 49.500000 0 77 77 NCBI RefSeq GCF_000299895.1-RS_2026_03_20 2026-03-20 2731 2640 50 23209204 GCF_000299915.1 PRJNA224116 SAMN02471169 AMRI00000000.1 reference genome 745411 1207039 Gallaecimonas xiamenensis 3-C-1 strain=3-C-1 na latest Contig Major Full 2012-09-27 ASM29991v1 The Third Institute of State Oceanic Administration (SOA) GCA_000299915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/915/GCF_000299915.1_ASM29991v1/ na assembly from type material na haploid bacteria 4062282 4062282 60.500000 0 66 66 NCBI RefSeq GCF_000299915.1-RS_2026_03_11 2026-03-11 3928 3840 73 23209203 GCF_000299935.1 PRJNA224116 SAMN02471166 AMRL00000000.1 na 1207063 526216 Oceanibaculum indicum P24 strain=P24 na latest Contig Major Full 2012-09-27 ASM29993v1 The Third Institute of State Oceanic Administration (SOA) GCA_000299935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/935/GCF_000299935.1_ASM29993v1/ na assembly from type material na haploid bacteria 3952792 3952792 65.500000 0 71 71 NCBI RefSeq GCF_000299935.1-RS_2025_12_16 2025-12-16 3848 3770 49 23209207 GCF_000299955.1 PRJNA224116 SAMN02604121 na na 1004788 28108 Alteromonas macleodii str. 'English Channel 673' strain=English Channel 673 na latest Complete Genome Major Full 2012-09-28 ASM29995v1 University Miguel Hernandez GCA_000299955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/955/GCF_000299955.1_ASM29995v1/ na na na haploid bacteria 4601785 4601785 45.000000 1 1 1 NCBI RefSeq GCF_000299955.1-RS_2026_02_15 2026-02-15 3976 3857 95 na GCF_000299965.1 PRJNA224116 SAMN02603953 na na 385025 385025 Cycloclasticus sp. P1 strain=P1; MCCC 1A01040 na latest Complete Genome Major Full 2012-09-28 ASM29996v1 The Third Institute of State Oceanic Administration (SOA) GCA_000299965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/965/GCF_000299965.1_ASM29996v1/ na na na haploid bacteria 2363215 2363215 42.000000 1 1 1 NCBI RefSeq GCF_000299965.1-RS_2024_08_13 2024-08-13 2300 2251 42 23144416 GCF_000300005.1 PRJNA224116 SAMN02603961 na reference genome 930169 285091 Alloalcanivorax dieselolei B5 strain=B5 na latest Complete Genome Major Full 2012-09-28 ASM30000v1 Third Institute of Oceanography, State Oceanic Administration GCA_000300005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/005/GCF_000300005.1_ASM30000v1/ na assembly from type material na haploid bacteria 4928223 4928223 61.500000 1 1 1 NCBI RefSeq GCF_000300005.1-RS_2025_12_11 2025-12-11 4472 4402 53 23144414 GCF_000300035.1 PRJNA224116 SAMN02603358 na na 1239881 91844 Candidatus Portiera aleyrodidarum BT-QVLC strain=BT-QVLC na latest Complete Genome Major Full 2012-09-28 ASM30003v1 IGSB, Department of Human Genetics GCA_000300035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/035/GCF_000300035.1_ASM30003v1/ na na na haploid bacteria 350928 350928 26.000000 1 1 1 NCBI RefSeq GCF_000300035.1-RS_2026_02_24 2026-02-24 294 250 38 23144417 GCF_000300045.1 PRJNA224116 SAMN02603884 na na 1234596 29519 Borreliella garinii NMJW1 strain=NMJW1 na latest Complete Genome Major Full 2012-09-28 ASM30004v1 State Key Laboratory of Pathogen and Biosecurity GCA_000300045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/045/GCF_000300045.1_ASM30004v1/ na na na haploid bacteria 902789 902789 28.500000 1 1 1 NCBI RefSeq GCF_000300045.1-RS_2025_12_12 2025-12-12 855 807 39 23144406 GCF_000300075.1 PRJNA224116 SAMN02603335 na na 1206109 91844 Candidatus Portiera aleyrodidarum BT-B-HRs strain=BT-B na latest Complete Genome Major Full 2012-09-28 ASM30007v1 IGSB, Department of Human Genetics GCA_000300075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/075/GCF_000300075.1_ASM30007v1/ na na na haploid bacteria 351658 351658 26.000000 1 1 1 NCBI RefSeq GCF_000300075.1-RS_2026_02_24 2026-02-24 292 246 38 23144417 GCF_000300095.1 PRJNA224116 SAMN02603523 na na 1229205 252970 Paraburkholderia phenoliruptrix BR3459a strain=BR3459a na latest Complete Genome Major Full 2012-09-28 ASM30009v1 LNCC GCA_000300095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/095/GCF_000300095.1_ASM30009v1/ na na na haploid bacteria 7651131 7651131 63.000000 3 3 3 NCBI RefSeq GCF_000300095.1-RS_2026_03_28 2026-03-28 6838 6582 84 23144415 GCF_000300115.1 PRJNA224116 SAMN03450030 AGCR00000000.1 na 1188 1188 Tolypothrix sp. PCC 7601 strain=PCC 7601 = UTEX B 481 na latest Scaffold Major Full 2012-09-28 Fremyella_diplosiphon-2.0.1 The Genome Institute GCA_000300115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/115/GCF_000300115.1_Fremyella_diplosiphon-2.0.1/ na na na haploid bacteria 9975142 9964042 40.500000 0 43 154 NCBI RefSeq GCF_000300115.1-RS_2024_08_13 2024-08-13 8356 8016 110 25953173 GCF_000300135.1 PRJNA224116 SAMN02603179 na na 1229758 1252 Leuconostoc carnosum JB16 strain=JB16 na latest Complete Genome Major Full 2012-09-28 ASM30013v1 Department of Life Science, Chung-Ang University, Republic of Korea GCA_000300135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/135/GCF_000300135.1_ASM30013v1/ na na na haploid bacteria 1773468 1773468 37.000000 5 5 5 NCBI RefSeq GCF_000300135.1-RS_2026_04_14 2026-04-14 1775 1679 79 23144413 GCF_000300175.1 PRJNA224116 SAMN02604120 na na 1004787 28108 Alteromonas macleodii str. 'Balearic Sea AD45' strain=Balearic Sea AD45 na latest Complete Genome Major Full 2012-09-28 ASM30017v1 University Miguel Hernandez GCA_000300175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/175/GCF_000300175.1_ASM30017v1/ na na na haploid bacteria 4674885 4674885 44.500000 2 2 2 NCBI RefSeq GCF_000300175.1-RS_2026_02_15 2026-02-15 4041 3929 92 na GCF_000300195.1 PRJNA224116 SAMN02472167 AMQH00000000.1 reference genome 1233099 219748 Clostridium tunisiense TJ strain=TJ na latest Contig Major Full 2012-09-28 ASM30019v1 Zhejiang University GCA_000300195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/195/GCF_000300195.1_ASM30019v1/ na na na haploid bacteria 4308385 4308385 31.000000 0 60 60 NCBI RefSeq GCF_000300195.1-RS_2025_08_07 2025-08-07 4074 3907 125 23209212 GCF_000300215.1 PRJNA224116 SAMN02470078 AMPM00000000.1 na 1207543 1681 Bifidobacterium bifidum IPLA 20015 strain=IPLA 20015 na latest Contig Major Full 2012-09-28 ASM30021v1 IPLA-CSIC GCA_000300215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/215/GCF_000300215.1_ASM30021v1/ na na na haploid bacteria 2138334 2138334 62.500000 0 571 571 NCBI RefSeq GCF_000300215.1-RS_2026_02_17 2026-02-17 2187 1888 59 na GCF_000300235.2 PRJNA224116 SAMN02471162 na reference genome 1123366 220697 Thalassospira xiamenensis M-5 = DSM 17429 strain=M-5 na latest Complete Genome Major Full 2015-01-09 ASM30023v2 The Third Institute of State Oceanic Administration (SOA) GCA_000300235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/235/GCF_000300235.2_ASM30023v2/ na assembly from type material na haploid bacteria 4768950 4768950 54.500000 2 2 2 NCBI RefSeq GCF_000300235.2-RS_2026_03_30 2026-03-30 4421 4325 77 23209216 GCF_000300255.2 PRJNA224116 SAMN03081445 na na 1236689 1291540 Candidatus Methanomethylophilus alvi Mx1201 strain=Mx1201 na latest Complete Genome Major Full 2013-04-09 ASM30025v2 Université d'Auvergne GCA_000300255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/255/GCF_000300255.2_ASM30025v2/ na assembly from type material na haploid archaea 1666795 1666795 55.500000 1 1 1 NCBI RefSeq GCF_000300255.2-RS_2025_12_02 2025-12-02 1680 1607 52 23209209 GCF_000300275.1 PRJNA224116 SAMN02471161 AMRN00000000.1 reference genome 1177928 502049 Thalassospira profundimaris WP0211 strain=WP0211 na latest Contig Major Full 2012-09-28 ASM30027v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/275/GCF_000300275.1_ASM30027v1/ na assembly from type material na haploid bacteria 4380232 4380232 55.000000 0 28 28 NCBI RefSeq GCF_000300275.1-RS_2026_03_28 2026-03-28 4095 4024 56 23209215 GCF_000300295.4 PRJNA224116 SAMN02469424 na na 1227812 1238 Piscirickettsia salmonis LF-89 = ATCC VR-1361 strain=ATCC VR-1361 na latest Complete Genome Major Full 2015-12-17 ASM30029v4 Macrogen GCA_000300295.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/295/GCF_000300295.4_ASM30029v4/ na assembly from type material na haploid bacteria 3507509 3507509 39.500000 5 5 5 NCBI RefSeq GCF_000300295.4-RS_2026_04_03 2026-04-03 3764 3394 78 26141111;26220311 GCF_000300335.1 PRJNA224116 SAMN02471160 AMRM00000000.1 reference genome 391937 1231180 Nitratireductor pacificus pht-3B strain=pht-3B na latest Contig Major Full 2012-09-28 ASM30033v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/335/GCF_000300335.1_ASM30033v1/ na assembly from type material na haploid bacteria 4466205 4466205 65.500000 0 51 51 NCBI RefSeq GCF_000300335.1-RS_2026_03_28 2026-03-28 4308 4208 55 23209217 GCF_000300355.2 PRJNA224116 SAMN02471934 AKYG00000000.1 na 1200302 38293 Photobacterium damselae subsp. piscicida DI21 strain=DI21 na latest Scaffold Major Full 2015-07-15 ASM30035v4 University of Santiago de Compostela GCA_000300355.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/355/GCF_000300355.2_ASM30035v4/ na na na haploid bacteria 4838269 3936108 41.000000 2 56 491 NCBI RefSeq GCF_000300355.2-RS_2025_02_10 2025-02-10 3902 3491 83 15689115;17074903;23474463;26092457 GCF_000300375.1 PRJNA224116 SAMN02471699 AMRA00000000.1 na 1122247 46351 Mycolicibacterium hassiacum DSM 44199 strain=DSM 44199 na latest Contig Major Full 2012-10-01 ASM30037v1 CNC-Center for Neuroscience and Cell Biology, University of Coimbra, Portugal GCA_000300375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/375/GCF_000300375.1_ASM30037v1/ na assembly from type material na haploid bacteria 5000164 5000164 69.500000 0 169 169 NCBI RefSeq GCF_000300375.1-RS_2026_03_28 2026-03-28 4892 4689 52 23209251 GCF_000300395.2 PRJNA224116 SAMN02472170 AMQT00000000.2 na 1176514 337 Burkholderia glumae AU6208 strain=AU6208 na latest Contig Major Full 2017-12-02 ASM30039v2 Zhejiang University GCA_000300395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/395/GCF_000300395.2_ASM30039v2/ na na na haploid bacteria 6059147 6059147 69.000000 0 96 96 NCBI RefSeq GCF_000300395.2-RS_2026_02_18 2026-02-18 5433 5191 65 na GCF_000300415.1 PRJNA224116 SAMN02472176 AMSA00000000.1 na 1234777 80842 Herbaspirillum rubrisubalbicans Os45 strain=Os45 na latest Contig Major Full 2012-10-01 ASM30041v1 Zhejiang University GCA_000300415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/415/GCF_000300415.1_ASM30041v1/ na na na haploid bacteria 5633154 5633154 61.500000 0 144 144 NCBI RefSeq GCF_000300415.1-RS_2025_08_02 2025-08-02 5212 5082 61 23209242 GCF_000300435.2 PRJNA224116 SAMN02469493 na na 1235827 80842 Herbaspirillum rubrisubalbicans Os34 strain=Os34 na latest Complete Genome Major Full 2020-05-18 ASM30043v2 Zhejiang University GCA_000300435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/435/GCF_000300435.2_ASM30043v2/ na na na haploid bacteria 6122717 6122717 61.500000 1 1 1 NCBI RefSeq GCF_000300435.2-RS_2026_03_31 2026-03-31 5550 5410 71 23209241 GCF_000300455.3 PRJNA224116 SAMN02472168 na reference genome 1235834 1158459 Kosakonia sacchari SP1 strain=SP1 na latest Complete Genome Major Full 2016-07-11 ASM30045v4 Zhejiang University GCA_000300455.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/455/GCF_000300455.3_ASM30045v4/ na assembly from type material na haploid bacteria 4902027 4902027 53.500000 1 1 1 NCBI RefSeq GCF_000300455.3-RS_2025_12_09 2025-12-09 4695 4521 116 23209221 GCF_000300475.1 PRJNA224116 SAMN02603757 na na 1195464 155322 Bacillus toyonensis biovar Thuringiensis MC28 strain=MC28 na latest Complete Genome Major Full 2012-10-01 ASM30047v1 Rice Research Institution of SICAU GCA_000300475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/475/GCF_000300475.1_ASM30047v1/ na na na haploid bacteria 6694533 6694533 35.000000 8 8 8 NCBI RefSeq GCF_000300475.1-RS_2026_04_10 2026-04-10 6848 6413 125 23209229 GCF_000300515.1 PRJNA224116 SAMN02471165 AMSI00000000.1 reference genome 1231190 721133 Nitratireductor indicus C115 strain=C115 na latest Contig Major Full 2012-10-01 ASM30051v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/515/GCF_000300515.1_ASM30051v1/ na assembly from type material na haploid bacteria 4992479 4992479 61.000000 0 75 75 NCBI RefSeq GCF_000300515.1-RS_2026_03_31 2026-03-31 4861 4761 52 23209238 GCF_000300535.1 PRJNA224116 SAMN02471164 AMSH00000000.1 na 1178537 1178537 Bacillus xiamenensis strain=HYC-10 na latest Contig Major Full 2012-10-01 ASM30053v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/535/GCF_000300535.1_ASM30053v1/ na assembly from type material na haploid bacteria 3611918 3611918 41.500000 0 134 134 NCBI RefSeq GCF_000300535.1-RS_2026_03_20 2026-03-20 3766 3636 40 23209239 GCF_000300555.1 PRJNA242539 SAMN00188834 AEOL00000000.1 na 597362 5341 Agaricus bisporus var. burnettii JB137-S8 strain=JB137-s8 na latest Scaffold Major Full 2012-10-16 Agabi_varbur_1 JGI GCA_000300555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/555/GCF_000300555.1_Agabi_varbur_1/ na na na haploid fungi 32614392 31234014 46.500000 0 2016 2526 JGI Annotation submitted by JGI 2024-01-02 11443 11255 184 23045686 GCF_000300575.1 PRJNA225500 SAMN02744070 AEOK00000000.1 reference genome 936046 5341 Agaricus bisporus var. bisporus H97 strain=H97 na latest Scaffold Major Full 2012-11-30 Agabi_varbisH97_2 JGI GCA_000300575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/575/GCF_000300575.1_Agabi_varbisH97_2/ na na na haploid fungi 30233745 30028778 46.500000 0 29 254 NCBI RefSeq Annotation submitted by NCBI RefSeq 2014-01-02 10606 10444 157 23045686 GCF_000300595.1 PRJNA242544 SAMN02981278 AEHB00000000.1 reference genome 650164 231932 Phanerochaete carnosa HHB-10118-sp strain=HHB-10118-sp na latest Scaffold Major Full 2012-10-16 Phanerochaete carnosa HHB-10118-Sp v1.0 DOE Joint Genome Institute GCA_000300595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/595/GCF_000300595.1_Phanerochaete_carnosa_HHB-10118-Sp_v1.0/ na na na haploid fungi 46293325 43133388 53.000000 0 1137 2612 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-02-05 14080 13918 138 22937793 GCF_000300635.1 PRJNA224116 SAMN02596916 AKAR00000000.1 na 1183155 106654 Acinetobacter nosocomialis Ab22222 strain=Ab22222 na latest Scaffold Major Full 2012-10-02 Acin_baum_Ab22222_V1 Broad Institute GCA_000300635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/635/GCF_000300635.1_Acin_baum_Ab22222_V1/ na na na haploid bacteria 4015811 3997474 38.500000 0 25 44 NCBI RefSeq GCF_000300635.1-RS_2026_03_31 2026-03-31 3948 3721 85 na GCF_000300655.1 PRJNA224116 SAMN02463956 AMLL00000000.1 na 1203544 573 Klebsiella pneumoniae subsp. pneumoniae WGLW1 strain=WGLW1 na latest Scaffold Major Full 2012-10-02 Kleb_pneu_WGLW1_V1 Broad Institute GCA_000300655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/655/GCF_000300655.1_Kleb_pneu_WGLW1_V1/ na na na haploid bacteria 5548332 5516480 57.500000 0 5 23 NCBI RefSeq GCF_000300655.1-RS_2025_02_19 2025-02-19 5436 5227 94 na GCF_000300675.1 PRJNA224116 SAMN02463957 AMLM00000000.1 na 1203545 573 Klebsiella pneumoniae subsp. pneumoniae WGLW2 strain=WGLW2 na latest Scaffold Major Full 2012-10-02 Kleb_pneu_WGLW2_V1 Broad Institute GCA_000300675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/675/GCF_000300675.1_Kleb_pneu_WGLW2_V1/ na na na haploid bacteria 5745996 5729369 57.000000 0 3 32 NCBI RefSeq GCF_000300675.1-RS_2025_01_05 2025-01-05 5582 5330 120 na GCF_000300695.1 PRJNA224116 SAMN01041250 AKIM00000000.1 na 1196421 1196420 Italian clover phyllody phytoplasma str. MA1 strain=MA na latest Contig Major Full 2012-10-01 ASM30069v1 Università di Udine GCA_000300695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/695/GCF_000300695.1_ASM30069v1/ na na na haploid bacteria 597245 597245 27.000000 0 197 197 NCBI RefSeq GCF_000300695.1-RS_2025_04_26 2025-04-26 671 547 33 22936033 GCF_000300715.1 PRJNA224116 SAMN02471523 AJIP00000000.1 na 1161912 2421 Thermosipho africanus H17ap60334 strain=H17ap60334 na latest Contig Major Full 2012-10-01 ASM30071v1 University of Alberta GCA_000300715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/715/GCF_000300715.1_ASM30071v1/ na na na haploid bacteria 2083551 2083551 30.500000 0 49 49 NCBI RefSeq GCF_000300715.1-RS_2025_02_17 2025-02-17 2260 2131 50 na GCF_000300735.3 PRJNA224116 SAMN01731171 AMRH00000000.2 na 1232392 573 Klebsiella pneumoniae subsp. pneumoniae KpO3210 strain=KpO3210 na latest Scaffold Major Full 2017-11-06 ASM30073v3 BIOMOL-INFORMATICS S.L. GCA_000300735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/735/GCF_000300735.3_ASM30073v3/ na na na haploid bacteria 5771908 5771908 57.000000 4 30 30 NCBI RefSeq GCF_000300735.3-RS_2025_05_03 2025-05-03 5713 5457 86 23209233;29940334 GCF_000300795.2 PRJNA224116 SAMN02470721 AMQS00000000.1 na 1231377 1363 Lactococcus garvieae DCC43 strain=DCC43 na latest Contig Minor Full 2012-10-01 LgDCC43_1.0 Norwegian University of Life Sciences GCA_000300795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/795/GCF_000300795.2_LgDCC43_1.0/ na na na haploid bacteria 2239001 2239001 38.000000 0 67 67 NCBI RefSeq GCF_000300795.2-RS_2025_04_26 2025-04-26 2297 2194 59 23209230 GCF_000300815.1 PRJNA224116 SAMN02472144 AMRX00000000.1 reference genome 1046714 1234606 Gayadomonas joobiniege G7 strain=G7 na latest Contig Major Full 2012-10-01 Gayjoov1 Yonsei University GCA_000300815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/815/GCF_000300815.1_Gayjoov1/ na assembly from type material na haploid bacteria 3910429 3910429 41.500000 1 8 8 NCBI RefSeq GCF_000300815.1-RS_2026_03_20 2026-03-20 3448 3342 79 23209220 GCF_000300835.1 PRJNA224116 SAMN02469893 AMSU00000000.1 na 1226115 573 Klebsiella pneumoniae subsp. pneumoniae KpQ3 strain=KpQ3 na latest Scaffold Major Full 2012-10-02 K1_1 ohnosequences! research group, Era7 Bioinformatics GCA_000300835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/835/GCF_000300835.1_K1_1/ na na na haploid bacteria 5466672 5401505 57.500000 0 18 54 NCBI RefSeq GCF_000300835.1-RS_2025_02_25 2025-02-25 5380 5163 106 23469341 GCF_000300855.1 PRJNA224116 SAMN01084074 ALJF00000000.1 reference genome 1156935 147266 Agrobacterium albertimagni AOL15 strain=AOL15 na latest Contig Major Full 2012-10-02 ASM30085v1 University of Illinois at Chicago GCA_000300855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/855/GCF_000300855.1_ASM30085v1/ na na na haploid bacteria 5085061 5085061 61.000000 0 55 55 NCBI RefSeq GCF_000300855.1-RS_2026_03_30 2026-03-30 4907 4798 58 23209236 GCF_000300875.1 PRJNA224116 SAMN02471163 AMSG00000000.1 reference genome 555500 555500 Galbibacter marinus strain=ck-I2-15 na latest Contig Major Full 2012-10-02 ASM30087v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/875/GCF_000300875.1_ASM30087v1/ na assembly from type material na haploid bacteria 3572447 3572447 37.000000 0 80 80 NCBI RefSeq GCF_000300875.1-RS_2025_11_21 2025-11-21 3177 3100 45 23209227 GCF_000300895.1 PRJNA224116 SAMN02470813 AMSV00000000.1 na 1206776 82996 Serratia plymuthica A30 strain=A30 na latest Contig Major Full 2012-10-02 ASM30089v1 Plant Research International GCA_000300895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/895/GCF_000300895.1_ASM30089v1/ na na na haploid bacteria 5554023 5554023 56.000000 0 78 78 NCBI RefSeq GCF_000300895.1-RS_2026_03_28 2026-03-28 5297 5130 77 23209245 GCF_000300915.1 PRJNA224116 SAMN00000311 AMOO00000000.1 na 386894 1346 Streptococcus iniae 9117 strain=9117 na latest Scaffold Major Full 2012-10-02 ASM30091v1 Baylor College of Medicine GCA_000300915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/915/GCF_000300915.1_ASM30091v1/ na na na haploid bacteria 2078360 2078160 37.000000 0 1 3 NCBI RefSeq GCF_000300915.1-RS_2026_01_30 2026-01-30 2005 1877 68 24625962 GCF_000300935.1 PRJNA224116 SAMN02463958 AMLN00000000.1 na 1203546 573 Klebsiella pneumoniae subsp. pneumoniae WGLW3 strain=WGLW3 na latest Scaffold Major Full 2012-10-02 Kleb_pneu_WGLW3_V1 Broad Institute GCA_000300935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/935/GCF_000300935.1_Kleb_pneu_WGLW3_V1/ na na na haploid bacteria 5548082 5518063 57.500000 0 6 23 NCBI RefSeq GCF_000300935.1-RS_2025_01_05 2025-01-05 5440 5221 103 na GCF_000300955.1 PRJNA224116 SAMN02463959 AMLO00000000.1 na 1203547 573 Klebsiella pneumoniae subsp. pneumoniae WGLW5 strain=WGLW5 na latest Scaffold Major Full 2012-10-02 Kleb_pneu_WGLW5_V1 Broad Institute GCA_000300955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/955/GCF_000300955.1_Kleb_pneu_WGLW5_V1/ na na na haploid bacteria 5821816 5788283 57.000000 0 10 34 NCBI RefSeq GCF_000300955.1-RS_2025_01_05 2025-01-05 5750 5521 100 na GCF_000300975.2 PRJNA224116 SAMN02471292 AEEC00000000.2 na 864073 92645 Herbaspirillum frisingense GSF30 strain=GSF30 na latest Contig Major Full 2013-04-22 HFRIS_v2 TU Darmstadt GCA_000300975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/975/GCF_000300975.2_HFRIS_v2/ na assembly from type material na haploid bacteria 5408328 5408328 63.000000 0 93 93 NCBI RefSeq GCF_000300975.2-RS_2026_03_31 2026-03-31 4988 4888 56 23825472 GCF_000300995.1 PRJNA224116 SAMN02471206 AMRJ00000000.1 reference genome 1177179 519051 Alcanivorax hongdengensis A-11-3 strain=A-11-3 na latest Contig Major Full 2012-10-02 ASM30099v1 The Third Institute of State Oceanic Administration (SOA) GCA_000300995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/300/995/GCF_000300995.1_ASM30099v1/ na assembly from type material na haploid bacteria 3664876 3664876 60.500000 0 93 93 NCBI RefSeq GCF_000300995.1-RS_2025_08_20 2025-08-20 3498 3442 48 23209226 GCF_000301035.1 PRJNA224116 SAMN02463905 AGZD00000000.1 reference genome 883111 178214 Facklamia hominis CCUG 36813 strain=CCUG 36813 na latest Scaffold Major Full 2012-10-11 Fack_homi_CCUG_36813_V1 Broad Institute GCA_000301035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/035/GCF_000301035.1_Fack_homi_CCUG_36813_V1/ na assembly from type material na haploid bacteria 1897623 1889090 39.000000 0 1 13 NCBI RefSeq GCF_000301035.1-RS_2025_12_11 2025-12-11 1784 1703 65 na GCF_000301055.1 PRJNA224116 SAMN02463906 AGZE00000000.1 na 883112 137730 Falseniella ignava CCUG 37419 strain=CCUG 37419 na latest Scaffold Major Full 2012-10-11 Fack_igna_CCUG_37419_V1 Broad Institute GCA_000301055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/055/GCF_000301055.1_Fack_igna_CCUG_37419_V1/ na assembly from type material na haploid bacteria 1766666 1743952 39.000000 0 6 42 NCBI RefSeq GCF_000301055.1-RS_2026_02_14 2026-02-14 1707 1611 58 na GCF_000301075.1 PRJNA224116 SAMN02463902 AGYA00000000.1 na 883096 1015 Bergeyella zoohelcum ATCC 43767 strain=ATCC 43767 na latest Scaffold Major Full 2012-10-11 Berg_zooh_ATCC_43767_V1 Broad Institute GCA_000301075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/075/GCF_000301075.1_Berg_zooh_ATCC_43767_V1/ na assembly from type material na haploid bacteria 2332784 2309984 36.000000 0 7 43 NCBI RefSeq GCF_000301075.1-RS_2025_12_23 2025-12-23 2169 2069 49 na GCF_000301095.1 PRJNA224116 SAMN02463903 AGYB00000000.1 na 883098 1015 Bergeyella zoohelcum CCUG 30536 strain=CCUG 30536 na latest Scaffold Major Full 2012-10-11 Berg_zooh_CCUG_30536_V1 Broad Institute GCA_000301095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/095/GCF_000301095.1_Berg_zooh_CCUG_30536_V1/ na na na haploid bacteria 2499181 2444142 36.500000 0 5 35 NCBI RefSeq GCF_000301095.1-RS_2025_09_25 2025-09-25 2366 2283 48 na GCF_000301115.1 PRJNA224116 SAMN02463886 AGZF00000000.1 na 883094 47770 Lactobacillus crispatus FB049-03 strain=FB049-03 na latest Scaffold Major Full 2012-10-11 Lact_cris_FB049-03_V1 Broad Institute GCA_000301115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/115/GCF_000301115.1_Lact_cris_FB049-03_V1/ na na na haploid bacteria 2459384 2342850 37.000000 0 5 100 NCBI RefSeq GCF_000301115.1-RS_2026_01_30 2026-01-30 2437 2223 79 na GCF_000301135.1 PRJNA224116 SAMN02463885 AGZG00000000.1 na 883092 47770 Lactobacillus crispatus FB077-07 strain=FB077-07 na latest Scaffold Major Full 2012-10-11 Lact_cris_FB077-07_V1 Broad Institute GCA_000301135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/135/GCF_000301135.1_Lact_cris_FB077-07_V1/ na na na haploid bacteria 2699381 2526985 37.000000 0 10 133 NCBI RefSeq GCF_000301135.1-RS_2025_03_12 2025-03-12 2659 2437 75 na GCF_000301175.1 PRJNA224116 SAMN02471275 AMHB00000000.1 na 1221245 470 Acinetobacter baumannii AB_1582-8 strain=AB_1582-8 na latest Contig Major Full 2012-10-02 ASM30117v1 Translational Genomics Research Institute GCA_000301175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/175/GCF_000301175.1_ASM30117v1/ na na na haploid bacteria 4054837 4054837 39.000000 0 253 253 NCBI RefSeq GCF_000301175.1-RS_2025_05_20 2025-05-20 4019 3839 64 na GCF_000301195.1 PRJNA224116 SAMN02471258 AMHD00000000.1 na 1221247 470 Acinetobacter baumannii AB_1594-8 strain=AB_1594-8 na latest Contig Major Full 2012-10-02 ASM30119v1 Translational Genomics Research Institute GCA_000301195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/195/GCF_000301195.1_ASM30119v1/ na na na haploid bacteria 3973074 3973074 39.000000 0 222 222 NCBI RefSeq GCF_000301195.1-RS_2025_06_25 2025-06-25 3891 3718 55 na GCF_000301215.1 PRJNA224116 SAMN02471270 AMHE00000000.1 na 1221248 470 Acinetobacter baumannii AB_1595-8 strain=AB_1595-8 na latest Contig Major Full 2012-10-02 ASM30121v1 Translational Genomics Research Institute GCA_000301215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/215/GCF_000301215.1_ASM30121v1/ na na na haploid bacteria 4070254 4070254 39.000000 0 205 205 NCBI RefSeq GCF_000301215.1-RS_2025_06_25 2025-06-25 4003 3847 60 na GCF_000301235.1 PRJNA224116 SAMN02471286 AMHF00000000.1 na 1221249 470 Acinetobacter baumannii AB_1649-8 strain=AB_1649-8 na latest Contig Major Full 2012-10-02 ASM30123v1 Translational Genomics Research Institute GCA_000301235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/235/GCF_000301235.1_ASM30123v1/ na na na haploid bacteria 3786017 3786017 39.000000 0 140 140 NCBI RefSeq GCF_000301235.1-RS_2025_06_25 2025-06-25 3666 3520 48 na GCF_000301255.1 PRJNA224116 SAMN02471224 AMHG00000000.1 na 1221250 470 Acinetobacter baumannii AB_1650-8 strain=AB_1650-8 na latest Contig Major Full 2012-10-02 ASM30125v1 Translational Genomics Research Institute GCA_000301255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/255/GCF_000301255.1_ASM30125v1/ na na na haploid bacteria 3791738 3791738 39.000000 0 133 133 NCBI RefSeq GCF_000301255.1-RS_2026_02_10 2026-02-10 3676 3526 60 na GCF_000301275.1 PRJNA224116 SAMN02471246 AMJO00000000.1 na 1221251 470 Acinetobacter baumannii AB_1766_8 strain=AB_1766_8 na latest Contig Major Full 2012-10-02 ASM30127v1 Translational Genomics Research Institute GCA_000301275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/275/GCF_000301275.1_ASM30127v1/ na na na haploid bacteria 4010535 4010535 39.000000 0 222 222 NCBI RefSeq GCF_000301275.1-RS_2025_05_20 2025-05-20 3926 3774 58 na GCF_000301295.1 PRJNA224116 SAMN02471225 AMHI00000000.1 na 1221253 470 Acinetobacter baumannii AB_2007-16-25-01-7 strain=AB_2007-16-25-01-7 na latest Contig Major Full 2012-10-02 ASM30129v1 Translational Genomics Research Institute GCA_000301295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/295/GCF_000301295.1_ASM30129v1/ na na na haploid bacteria 3961436 3961436 39.000000 0 81 81 NCBI RefSeq GCF_000301295.1-RS_2025_05_20 2025-05-20 3848 3690 64 na GCF_000301315.1 PRJNA224116 SAMN02471271 AMHL00000000.1 na 1221256 470 Acinetobacter baumannii AB_2008-15-45 strain=AB_2008-15-45 na latest Contig Major Full 2012-10-02 ASM30131v1 Translational Genomics Research Institute GCA_000301315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/315/GCF_000301315.1_ASM30131v1/ na na na haploid bacteria 4100733 4100733 39.000000 0 140 140 NCBI RefSeq GCF_000301315.1-RS_2025_06_25 2025-06-25 4027 3861 60 na GCF_000301335.1 PRJNA224116 SAMN02471249 AMHN00000000.1 na 1221258 470 Acinetobacter baumannii AB_2008-15-69 strain=AB_2008-15-69 na latest Contig Major Full 2012-10-02 ASM30133v1 Translational Genomics Research Institute GCA_000301335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/335/GCF_000301335.1_ASM30133v1/ na na na haploid bacteria 4136907 4136907 39.000000 0 75 75 NCBI RefSeq GCF_000301335.1-RS_2026_01_16 2026-01-16 3973 3826 65 na GCF_000301355.1 PRJNA224116 SAMN02471278 AMHP00000000.1 na 1221260 470 Acinetobacter baumannii AB_2008-15-71 strain=AB_2008-15-71 na latest Contig Major Full 2012-10-02 ASM30135v1 Translational Genomics Research Institute GCA_000301355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/355/GCF_000301355.1_ASM30135v1/ na na na haploid bacteria 3886101 3886101 39.000000 0 90 90 NCBI RefSeq GCF_000301355.1-RS_2025_05_20 2025-05-20 3729 3575 64 na GCF_000301375.1 PRJNA224116 SAMN02471262 AMHU00000000.1 na 1221265 470 Acinetobacter baumannii AB_515-8 strain=AB_515-8 na latest Contig Major Full 2012-10-02 ASM30137v1 Translational Genomics Research Institute GCA_000301375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/375/GCF_000301375.1_ASM30137v1/ na na na haploid bacteria 4077480 4077480 39.000000 0 222 222 NCBI RefSeq GCF_000301375.1-RS_2025_05_20 2025-05-20 4027 3857 62 na GCF_000301395.1 PRJNA224116 SAMN02471252 AMHV00000000.1 na 1221266 470 Acinetobacter baumannii AB_908-12 strain=AB_908-12 na latest Contig Major Full 2012-10-02 ASM30139v1 Translational Genomics Research Institute GCA_000301395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/395/GCF_000301395.1_ASM30139v1/ na na na haploid bacteria 3992621 3992621 39.000000 0 115 115 NCBI RefSeq GCF_000301395.1-RS_2025_05_27 2025-05-27 3874 3734 65 na GCF_000301415.1 PRJNA224116 SAMN02471281 AMHY00000000.1 na 1221269 470 Acinetobacter baumannii AB_909-01-7 strain=AB_909-01-7 na latest Contig Major Full 2012-10-02 ASM30141v1 Translational Genomics Research Institute GCA_000301415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/415/GCF_000301415.1_ASM30141v1/ na na na haploid bacteria 3790688 3790688 39.000000 0 117 117 NCBI RefSeq GCF_000301415.1-RS_2026_02_10 2026-02-10 3655 3503 59 na GCF_000301435.1 PRJNA224116 SAMN02471282 AMHZ00000000.1 na 1221270 470 Acinetobacter baumannii AB_909-02-7 strain=AB_909-02-7 na latest Contig Major Full 2012-10-02 ASM30143v1 Translational Genomics Research Institute GCA_000301435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/435/GCF_000301435.1_ASM30143v1/ na na na haploid bacteria 3929639 3929639 39.000000 0 98 98 NCBI RefSeq GCF_000301435.1-RS_2026_01_24 2026-01-24 3811 3660 65 na GCF_000301455.1 PRJNA224116 SAMN02471263 AMIF00000000.1 na 1221275 470 Acinetobacter baumannii AB_TG2022 strain=AB_TG2022 na latest Contig Major Full 2012-10-02 ASM30145v1 Translational Genomics Research Institute GCA_000301455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/455/GCF_000301455.1_ASM30145v1/ na na na haploid bacteria 3936091 3936091 39.000000 0 198 198 NCBI RefSeq GCF_000301455.1-RS_2025_05_20 2025-05-20 3851 3688 66 na GCF_000301475.1 PRJNA224116 SAMN02471239 AMIG00000000.1 na 1221276 470 Acinetobacter baumannii AB_TG2023 strain=AB_TG2023 na latest Contig Major Full 2012-10-02 ASM30147v1 Translational Genomics Research Institute GCA_000301475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/475/GCF_000301475.1_ASM30147v1/ na na na haploid bacteria 3944282 3944282 39.000000 0 175 175 NCBI RefSeq GCF_000301475.1-RS_2025_05_27 2025-05-27 3849 3671 66 na GCF_000301495.1 PRJNA224116 SAMN02471229 AMIH00000000.1 na 1221277 470 Acinetobacter baumannii AB_TG2026 strain=AB_TG2026 na latest Contig Major Full 2012-10-02 ASM30149v1 Translational Genomics Research Institute GCA_000301495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/495/GCF_000301495.1_ASM30149v1/ na na na haploid bacteria 4208784 4208784 39.500000 0 691 691 NCBI RefSeq GCF_000301495.1-RS_2025_05_20 2025-05-20 4359 4116 47 na GCF_000301515.1 PRJNA224116 SAMN02471284 AMII00000000.1 na 1221278 470 Acinetobacter baumannii AB_TG2028 strain=AB_TG2028 na latest Contig Major Full 2012-10-02 ASM30151v1 Translational Genomics Research Institute GCA_000301515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/515/GCF_000301515.1_ASM30151v1/ na na na haploid bacteria 3770742 3770742 39.000000 0 129 129 NCBI RefSeq GCF_000301515.1-RS_2025_05_20 2025-05-20 3645 3513 68 na GCF_000301535.1 PRJNA224116 SAMN02471240 AMIJ00000000.1 na 1221279 470 Acinetobacter baumannii AB_TG2030 strain=AB_TG2030 na latest Contig Major Full 2012-10-02 ASM30153v1 Translational Genomics Research Institute GCA_000301535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/535/GCF_000301535.1_ASM30153v1/ na na na haploid bacteria 3764393 3764393 39.000000 0 151 151 NCBI RefSeq GCF_000301535.1-RS_2026_02_10 2026-02-10 3661 3522 58 na GCF_000301555.1 PRJNA224116 SAMN02471264 AMIK00000000.1 na 1221280 470 Acinetobacter baumannii AB_TG2031 strain=AB_TG2031 na latest Contig Major Full 2012-10-02 ASM30155v1 Translational Genomics Research Institute GCA_000301555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/555/GCF_000301555.1_ASM30155v1/ na na na haploid bacteria 3782788 3782788 39.000000 0 75 75 NCBI RefSeq GCF_000301555.1-RS_2026_02_09 2026-02-09 3631 3513 62 na GCF_000301575.1 PRJNA224116 SAMN02471230 AMIM00000000.1 na 1221282 470 Acinetobacter baumannii AB_TG2631 strain=AB_TG2631 na latest Contig Major Full 2012-10-02 ASM30157v1 Translational Genomics Research Institute GCA_000301575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/575/GCF_000301575.1_ASM30157v1/ na na na haploid bacteria 3881302 3881302 39.000000 0 95 95 NCBI RefSeq GCF_000301575.1-RS_2025_05_27 2025-05-27 3746 3610 61 na GCF_000301595.1 PRJNA224116 SAMN02471231 AMIN00000000.1 na 1221283 470 Acinetobacter baumannii AB_TG27323 strain=AB_TG27323 na latest Contig Major Full 2012-10-02 ASM30159v1 Translational Genomics Research Institute GCA_000301595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/595/GCF_000301595.1_ASM30159v1/ na na na haploid bacteria 3962171 3962171 39.000000 0 103 103 NCBI RefSeq GCF_000301595.1-RS_2025_05_27 2025-05-27 3826 3658 69 na GCF_000301615.1 PRJNA224116 SAMN02471233 AMIP00000000.1 na 1221285 470 Acinetobacter baumannii AB_TG27331 strain=AB_TG27331 na latest Contig Major Full 2012-10-02 ASM30161v1 Translational Genomics Research Institute GCA_000301615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/615/GCF_000301615.1_ASM30161v1/ na na na haploid bacteria 4062196 4062196 39.000000 0 148 148 NCBI RefSeq GCF_000301615.1-RS_2025_06_25 2025-06-25 3978 3798 73 na GCF_000301635.1 PRJNA224116 SAMN02471235 AMIT00000000.1 na 1221289 1221289 Acinetobacter sp. TG27347 strain=TG27347 na latest Contig Major Full 2012-10-02 ASM30163v1 Translational Genomics Research Institute GCA_000301635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/635/GCF_000301635.1_ASM30163v1/ na na na haploid bacteria 4016748 4016748 38.500000 0 90 90 NCBI RefSeq GCF_000301635.1-RS_2025_02_19 2025-02-19 3884 3728 68 na GCF_000301655.1 PRJNA224116 SAMN02471236 AMIU00000000.1 na 1221290 470 Acinetobacter baumannii AB_TG5064 strain=AB_TG5064 na latest Contig Major Full 2012-10-02 ASM30165v1 Translational Genomics Research Institute GCA_000301655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/655/GCF_000301655.1_ASM30165v1/ na na na haploid bacteria 3760971 3760971 39.500000 0 471 471 NCBI RefSeq GCF_000301655.1-RS_2025_05_20 2025-05-20 3806 3562 60 na GCF_000301675.1 PRJNA224116 SAMN02471242 AMIY00000000.1 na 1221295 471 Acinetobacter calcoaceticus TG19593 strain=TG19593 na latest Contig Major Full 2012-10-02 ASM30167v1 Translational Genomics Research Institute GCA_000301675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/675/GCF_000301675.1_ASM30167v1/ na na na haploid bacteria 3911510 3911510 38.500000 0 29 29 NCBI RefSeq GCF_000301675.1-RS_2026_05_27 2026-05-27 3722 3586 68 na GCF_000301695.1 PRJNA224116 SAMN02471287 AMIZ00000000.1 na 1221296 106654 Acinetobacter nosocomialis TG19596 strain=TG19596 na latest Contig Major Full 2012-10-02 ASM30169v1 Translational Genomics Research Institute GCA_000301695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/695/GCF_000301695.1_ASM30169v1/ na na na haploid bacteria 3790318 3790318 38.500000 0 86 86 NCBI RefSeq GCF_000301695.1-RS_2026_05_27 2026-05-27 3674 3474 79 na GCF_000301715.1 PRJNA224116 SAMN02471289 AMJC00000000.1 na 1221299 29430 Acinetobacter haemolyticus TG21157 strain=TG21157 na latest Contig Major Full 2012-10-02 ASM30171v1 Translational Genomics Research Institute GCA_000301715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/715/GCF_000301715.1_ASM30171v1/ na na na haploid bacteria 3324360 3324360 39.500000 0 175 175 NCBI RefSeq GCF_000301715.1-RS_2025_12_22 2025-12-22 3228 2986 80 na GCF_000301735.1 PRJNA224116 SAMN02471272 AMJD00000000.1 na 1221300 40214 Acinetobacter johnsonii TG19605 strain=TG19605 na latest Contig Major Full 2012-10-02 ASM30173v1 Translational Genomics Research Institute GCA_000301735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/735/GCF_000301735.1_ASM30173v1/ na na na haploid bacteria 3532492 3532492 41.500000 0 186 186 NCBI RefSeq GCF_000301735.1-RS_2026_05_27 2026-05-27 3535 3309 95 na GCF_000301755.1 PRJNA224116 SAMN02471243 AMJG00000000.1 na 1221307 28090 Acinetobacter lwoffii TG19636 strain=TG19636 na latest Contig Major Full 2012-10-02 ASM30175v1 Translational Genomics Research Institute GCA_000301755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/755/GCF_000301755.1_ASM30175v1/ na na na haploid bacteria 3497784 3497784 43.000000 0 245 245 NCBI RefSeq GCF_000301755.1-RS_2026_04_04 2026-04-04 3540 3274 88 na GCF_000301775.1 PRJNA224116 SAMN02471244 AMJH00000000.1 na 1221308 106654 Acinetobacter nosocomialis TG21145 strain=TG21145 na latest Contig Major Full 2012-10-02 ASM30177v1 Translational Genomics Research Institute GCA_000301775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/775/GCF_000301775.1_ASM30177v1/ na na na haploid bacteria 4103253 4103253 38.500000 0 39 39 NCBI RefSeq GCF_000301775.1-RS_2026_05_27 2026-05-27 3995 3806 76 na GCF_000301795.1 PRJNA224116 SAMN02471290 AMJJ00000000.1 na 1221310 40216 Acinetobacter radioresistens TG02010 strain=TG02010 na latest Contig Major Full 2012-10-02 ASM30179v1 Translational Genomics Research Institute GCA_000301795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/795/GCF_000301795.1_ASM30179v1/ na na na haploid bacteria 3063848 3063848 41.500000 0 38 38 NCBI RefSeq GCF_000301795.1-RS_2025_12_22 2025-12-22 2890 2765 85 na GCF_000301815.1 PRJNA224116 SAMN02471245 AMJK00000000.1 na 1221311 108981 Acinetobacter schindleri TG19614 strain=TG19614 na latest Contig Major Full 2012-10-02 ASM30181v1 Translational Genomics Research Institute GCA_000301815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/815/GCF_000301815.1_ASM30181v1/ na na na haploid bacteria 3197027 3197027 42.500000 0 159 159 NCBI RefSeq GCF_000301815.1-RS_2026_05_22 2026-05-22 3094 2945 73 na GCF_000301835.1 PRJNA224116 SAMN02471274 AMHA00000000.1 na 1221244 470 Acinetobacter baumannii AB_1536-8 strain=AB_1536-8 na latest Contig Major Full 2012-10-02 ASM30183v1 Translational Genomics Research Institute GCA_000301835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/835/GCF_000301835.1_ASM30183v1/ na na na haploid bacteria 3844187 3844187 39.000000 0 194 194 NCBI RefSeq GCF_000301835.1-RS_2025_05_20 2025-05-20 3702 3559 60 na GCF_000301855.1 PRJNA224116 SAMN02471247 AMHC00000000.1 na 1221246 470 Acinetobacter baumannii AB_1583-8 strain=AB_1583-8 na latest Contig Major Full 2012-10-02 ASM30185v1 Translational Genomics Research Institute GCA_000301855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/855/GCF_000301855.1_ASM30185v1/ na na na haploid bacteria 3889613 3889613 39.000000 0 322 322 NCBI RefSeq GCF_000301855.1-RS_2026_02_09 2026-02-09 3914 3722 51 na GCF_000301875.1 PRJNA224116 SAMN02471248 AMHH00000000.1 na 1221252 470 Acinetobacter baumannii AB_2007-09-110-01-7 strain=AB_2007-09-110-01-7 na latest Contig Major Full 2012-10-02 ASM30187v1 Translational Genomics Research Institute GCA_000301875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/875/GCF_000301875.1_ASM30187v1/ na na na haploid bacteria 3965849 3965849 39.000000 0 274 274 NCBI RefSeq GCF_000301875.1-RS_2026_02_11 2026-02-11 3888 3551 62 na GCF_000301895.1 PRJNA224116 SAMN02471276 AMHJ00000000.1 na 1221254 470 Acinetobacter baumannii AB_2007-16-27-01 strain=AB_2007-16-27-01 na latest Contig Major Full 2012-10-02 ASM30189v1 Translational Genomics Research Institute GCA_000301895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/895/GCF_000301895.1_ASM30189v1/ na na na haploid bacteria 3970109 3970109 39.000000 0 71 71 NCBI RefSeq GCF_000301895.1-RS_2025_05_20 2025-05-20 3850 3680 68 na GCF_000301915.1 PRJNA224116 SAMN02471277 AMHK00000000.1 na 1221255 470 Acinetobacter baumannii AB_2008-15-34-7 strain=AB_2008-15-34-7 na latest Contig Major Full 2012-10-02 ASM30191v1 Translational Genomics Research Institute GCA_000301915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/915/GCF_000301915.1_ASM30191v1/ na na na haploid bacteria 3918675 3918675 39.000000 0 157 157 NCBI RefSeq GCF_000301915.1-RS_2026_01_19 2026-01-19 3832 3681 64 na GCF_000301935.1 PRJNA224116 SAMN02471259 AMHM00000000.1 na 1221257 470 Acinetobacter baumannii AB_2008-15-52 strain=AB_2008-15-52 na latest Contig Major Full 2012-10-02 ASM30193v1 Translational Genomics Research Institute GCA_000301935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/935/GCF_000301935.1_ASM30193v1/ na na na haploid bacteria 3889382 3889382 39.000000 0 104 104 NCBI RefSeq GCF_000301935.1-RS_2025_05_20 2025-05-20 3744 3586 63 na GCF_000301955.1 PRJNA224116 SAMN02471250 AMHO00000000.1 na 1221259 470 Acinetobacter baumannii AB_2008-15-70 strain=AB_2008-15-70 na latest Contig Major Full 2012-10-02 ASM30195v1 Translational Genomics Research Institute GCA_000301955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/955/GCF_000301955.1_ASM30195v1/ na na na haploid bacteria 4101914 4101914 39.000000 0 234 234 NCBI RefSeq GCF_000301955.1-RS_2025_06_25 2025-06-25 4089 3899 58 na GCF_000301975.1 PRJNA224116 SAMN02471226 AMHQ00000000.1 na 1221261 470 Acinetobacter baumannii AB_2008-23-01-01-7 strain=AB_2008-23-01-01-7 na latest Contig Major Full 2012-10-02 ASM30197v1 Translational Genomics Research Institute GCA_000301975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/975/GCF_000301975.1_ASM30197v1/ na na na haploid bacteria 4032165 4032165 39.500000 0 116 116 NCBI RefSeq GCF_000301975.1-RS_2026_01_31 2026-01-31 3927 3765 61 na GCF_000301995.1 PRJNA224116 SAMN02471279 AMHS00000000.1 na 1221263 470 Acinetobacter baumannii AB_2009-04-01-7 strain=AB_2009-04-01-7 na latest Contig Major Full 2012-10-02 ASM30199v1 Translational Genomics Research Institute GCA_000301995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/301/995/GCF_000301995.1_ASM30199v1/ na na na haploid bacteria 3839270 3839270 39.000000 0 86 86 NCBI RefSeq GCF_000301995.1-RS_2025_05_20 2025-05-20 3695 3544 60 na GCF_000302015.1 PRJNA224116 SAMN02471251 AMHT00000000.1 na 1221264 470 Acinetobacter baumannii AB_2009-04-02-7 strain=AB_2009-04-02-7 na latest Contig Major Full 2012-10-02 ASM30201v1 Translational Genomics Research Institute GCA_000302015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/015/GCF_000302015.1_ASM30201v1/ na na na haploid bacteria 3972032 3972032 39.000000 0 163 163 NCBI RefSeq GCF_000302015.1-RS_2026_01_15 2026-01-15 3875 3734 64 na GCF_000302035.1 PRJNA224116 SAMN02471253 AMHW00000000.1 na 1221267 470 Acinetobacter baumannii AB_908-13 strain=AB_908-13 na latest Contig Major Full 2012-10-02 ASM30203v1 Translational Genomics Research Institute GCA_000302035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/035/GCF_000302035.1_ASM30203v1/ na na na haploid bacteria 3973165 3973165 39.000000 0 175 175 NCBI RefSeq GCF_000302035.1-RS_2026_01_30 2026-01-30 3893 3732 68 na GCF_000302055.1 PRJNA224116 SAMN02471280 AMHX00000000.1 na 1221268 470 Acinetobacter baumannii AB_908-14-7 strain=AB_908-14-7 na latest Contig Major Full 2012-10-02 ASM30205v1 Translational Genomics Research Institute GCA_000302055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/055/GCF_000302055.1_ASM30205v1/ na na na haploid bacteria 3850665 3850665 39.000000 0 291 291 NCBI RefSeq GCF_000302055.1-RS_2025_05_20 2025-05-20 3882 3670 62 na GCF_000302075.1 PRJNA224116 SAMN02471227 AMIA00000000.1 na 1221271 470 Acinetobacter baumannii AB_909-05 strain=AB_909-05 na latest Contig Major Full 2012-10-02 ASM30207v1 Translational Genomics Research Institute GCA_000302075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/075/GCF_000302075.1_ASM30207v1/ na na na haploid bacteria 4045601 4045601 39.000000 0 181 181 NCBI RefSeq GCF_000302075.1-RS_2026_02_01 2026-02-01 3995 3834 62 na GCF_000302095.1 PRJNA224116 SAMN02471254 AMIB00000000.1 na 1221272 470 Acinetobacter baumannii AB_909-14-7 strain=AB_909-14-7 na latest Contig Major Full 2012-10-02 ASM30209v1 Translational Genomics Research Institute GCA_000302095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/095/GCF_000302095.1_ASM30209v1/ na na na haploid bacteria 4006324 4006324 39.000000 0 584 584 NCBI RefSeq GCF_000302095.1-RS_2025_05_20 2025-05-20 4272 3951 68 na GCF_000302115.1 PRJNA224116 SAMN02471283 AMIC00000000.1 na 1221291 202950 Acinetobacter baylyi TG19579 strain=TG19579 na latest Contig Major Full 2012-10-02 ASM30211v1 Translational Genomics Research Institute GCA_000302115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/115/GCF_000302115.1_ASM30211v1/ na na na haploid bacteria 3746897 3746897 40.000000 0 95 95 NCBI RefSeq GCF_000302115.1-RS_2026_05_27 2026-05-27 3531 3354 83 na GCF_000302135.1 PRJNA224116 SAMN02471228 AMID00000000.1 na 1221273 470 Acinetobacter baumannii AB_TG19617 strain=AB_TG19617 na latest Contig Major Full 2012-10-02 ASM30213v1 Translational Genomics Research Institute GCA_000302135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/135/GCF_000302135.1_ASM30213v1/ na na na haploid bacteria 3890585 3890585 39.000000 0 59 59 NCBI RefSeq GCF_000302135.1-RS_2026_01_01 2026-01-01 3753 3626 69 na GCF_000302155.1 PRJNA224116 SAMN02471238 AMIE00000000.1 na 1221274 470 Acinetobacter baumannii AB_TG2018 strain=AB_TG2018 na latest Contig Major Full 2012-10-02 ASM30215v1 Translational Genomics Research Institute GCA_000302155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/155/GCF_000302155.1_ASM30215v1/ na na na haploid bacteria 3975196 3975196 39.000000 0 147 147 NCBI RefSeq GCF_000302155.1-RS_2025_05_20 2025-05-20 3886 3703 65 na GCF_000302175.1 PRJNA224116 SAMN02471265 AMIL00000000.1 na 1221281 470 Acinetobacter baumannii AB_TG2032 strain=AB_TG2032 na latest Contig Major Full 2012-10-02 ASM30217v1 Translational Genomics Research Institute GCA_000302175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/175/GCF_000302175.1_ASM30217v1/ na na na haploid bacteria 3557150 3557150 39.500000 0 353 353 NCBI RefSeq GCF_000302175.1-RS_2026_02_10 2026-02-10 3512 3321 62 na GCF_000302195.1 PRJNA224116 SAMN02471232 AMIO00000000.1 na 1221284 470 Acinetobacter baumannii AB_TG27327 strain=AB_TG27327 na latest Contig Major Full 2012-10-02 ASM30219v1 Translational Genomics Research Institute GCA_000302195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/195/GCF_000302195.1_ASM30219v1/ na na na haploid bacteria 4012960 4012960 39.000000 0 104 104 NCBI RefSeq GCF_000302195.1-RS_2026_01_15 2026-01-15 3879 3730 72 na GCF_000302215.1 PRJNA224116 SAMN02471234 AMIQ00000000.1 na 1221286 470 Acinetobacter baumannii AB_TG27335 strain=AB_TG27335 na latest Contig Major Full 2012-10-02 ASM30221v1 Translational Genomics Research Institute GCA_000302215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/215/GCF_000302215.1_ASM30221v1/ na na na haploid bacteria 4061401 4061401 39.000000 0 137 137 NCBI RefSeq GCF_000302215.1-RS_2025_05_27 2025-05-27 3976 3794 69 na GCF_000302235.1 PRJNA224116 SAMN02471260 AMIR00000000.1 na 1221287 470 Acinetobacter baumannii AB_TG27339 strain=AB_TG27339 na latest Contig Major Full 2012-10-02 ASM30223v1 Translational Genomics Research Institute GCA_000302235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/235/GCF_000302235.1_ASM30223v1/ na na na haploid bacteria 3971513 3971513 39.000000 0 46 46 NCBI RefSeq GCF_000302235.1-RS_2025_05_20 2025-05-20 3844 3686 70 na GCF_000302255.1 PRJNA224116 SAMN02471285 AMIS00000000.1 na 1221288 470 Acinetobacter baumannii AB_TG27343 strain=AB_TG27343 na latest Contig Major Full 2012-10-02 ASM30225v1 Translational Genomics Research Institute GCA_000302255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/255/GCF_000302255.1_ASM30225v1/ na na na haploid bacteria 4011165 4011165 39.000000 0 182 182 NCBI RefSeq GCF_000302255.1-RS_2025_05_27 2025-05-27 4039 3830 68 na GCF_000302275.1 PRJNA224116 SAMN02471241 AMIV00000000.1 na 1221292 470 Acinetobacter baumannii TG19582 strain=TG19582 na latest Contig Major Full 2012-10-02 ASM30227v1 Translational Genomics Research Institute GCA_000302275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/275/GCF_000302275.1_ASM30227v1/ na na na haploid bacteria 3797693 3797693 39.000000 0 366 366 NCBI RefSeq GCF_000302275.1-RS_2026_02_11 2026-02-11 3905 3622 76 na GCF_000302295.1 PRJNA224116 SAMN02471266 AMIW00000000.1 na 1221293 471 Acinetobacter calcoaceticus TG19585 strain=TG19585 na latest Contig Major Full 2012-10-02 ASM30229v1 Translational Genomics Research Institute GCA_000302295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/295/GCF_000302295.1_ASM30229v1/ na na na haploid bacteria 3810905 3810905 38.500000 0 34 34 NCBI RefSeq GCF_000302295.1-RS_2026_05_27 2026-05-27 3670 3533 70 na GCF_000302315.1 PRJNA224116 SAMN02471267 AMJA00000000.1 na 1221297 29430 Acinetobacter haemolyticus TG19599 strain=TG19599 na latest Contig Major Full 2012-10-02 ASM30231v1 Translational Genomics Research Institute GCA_000302315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/315/GCF_000302315.1_ASM30231v1/ na na na haploid bacteria 3386441 3386441 39.500000 0 261 261 NCBI RefSeq GCF_000302315.1-RS_2025_12_22 2025-12-22 3270 3093 27 na GCF_000302335.1 PRJNA224116 SAMN02471255 AMJE00000000.1 na 1221301 40214 Acinetobacter johnsonii TG19625 strain=TG19625 na latest Contig Major Full 2012-10-02 ASM30233v1 Translational Genomics Research Institute GCA_000302335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/335/GCF_000302335.1_ASM30233v1/ na na na haploid bacteria 3599471 3599471 41.500000 0 111 111 NCBI RefSeq GCF_000302335.1-RS_2026_05_24 2026-05-24 3588 3363 86 na GCF_000302355.1 PRJNA224116 SAMN02471273 AMJF00000000.1 na 1221306 40215 Acinetobacter junii TG19608 strain=TG19608 na latest Contig Major Full 2012-10-02 ASM30235v1 Translational Genomics Research Institute GCA_000302355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/355/GCF_000302355.1_ASM30235v1/ na na na haploid bacteria 3257504 3257504 38.500000 0 136 136 NCBI RefSeq GCF_000302355.1-RS_2026_05_27 2026-05-27 3114 2910 74 na GCF_000302375.1 PRJNA224116 SAMN02471268 AMJI00000000.1 na 1221309 48296 Acinetobacter pittii TG6411 strain=TG6411 na latest Contig Major Full 2012-10-02 ASM30237v1 Translational Genomics Research Institute GCA_000302375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/375/GCF_000302375.1_ASM30237v1/ na na na haploid bacteria 3919745 3919745 39.000000 0 66 66 NCBI RefSeq GCF_000302375.1-RS_2026_02_19 2026-02-19 3818 3658 71 na GCF_000302395.1 PRJNA224116 SAMN02471256 AMJL00000000.1 na 1221302 1221302 Acinetobacter sp. 528 strain=528 na latest Contig Major Full 2012-10-02 ASM30239v1 Translational Genomics Research Institute GCA_000302395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/395/GCF_000302395.1_ASM30239v1/ na na na haploid bacteria 4051342 4051342 38.500000 0 293 293 NCBI RefSeq GCF_000302395.1-RS_2025_02_19 2025-02-19 3972 3780 63 na GCF_000302415.1 PRJNA224116 SAMN02471257 AMJM00000000.1 na 1221303 1221303 Acinetobacter sp. TG19627 strain=TG19627 na latest Contig Major Full 2012-10-02 ASM30241v1 Translational Genomics Research Institute GCA_000302415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/415/GCF_000302415.1_ASM30241v1/ na na na haploid bacteria 4524649 4524649 41.000000 0 109 109 NCBI RefSeq GCF_000302415.1-RS_2024_07_04 2024-07-04 4389 4223 75 na GCF_000302435.1 PRJNA224116 SAMN02471269 AMJN00000000.1 na 1221304 1221304 Acinetobacter sp. TG2027 strain=TG2027 na latest Contig Major Full 2012-10-02 ASM30243v1 Translational Genomics Research Institute GCA_000302435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/435/GCF_000302435.1_ASM30243v1/ na na na haploid bacteria 3927238 3927238 38.500000 0 66 66 NCBI RefSeq GCF_000302435.1-RS_2024_06_10 2024-06-10 3787 3634 70 na GCF_000302455.1 PRJNA224116 SAMN02471940 AMPO00000000.1 na 1204725 2162 Methanobacterium formicicum DSM 3637 strain=DSM 3637 na latest Contig Major Full 2012-10-02 ASM30245v1 Deparment of Genetics, University of Seville, Spain GCA_000302455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/455/GCF_000302455.1_ASM30245v1/ na na na haploid archaea 2684267 2684267 38.000000 0 28 28 NCBI RefSeq GCF_000302455.1-RS_2026_02_18 2026-02-18 2605 2541 55 23209223 GCF_000302495.1 PRJNA224116 SAMN02470825 AMSO00000000.1 na 749219 480 Moraxella catarrhalis RH4 strain=RH4 na latest Contig Major Full 2012-10-02 RH4.0 Radboud University Medical Center GCA_000302495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/495/GCF_000302495.1_RH4.0/ na na na haploid bacteria 1836691 1836691 41.500000 0 9 9 NCBI RefSeq GCF_000302495.1-RS_2025_12_06 2025-12-06 1717 1633 52 23209224 GCF_000302515.1 PRJNA224116 SAMN02604070 na na 1234380 1747 Cutibacterium acnes C1 strain=C1 na latest Complete Genome Major Full 2012-10-03 ASM30251v1 Tokyo Medical and Dental University GCA_000302515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/515/GCF_000302515.1_ASM30251v1/ na na na haploid bacteria 2519002 2519002 60.000000 1 1 1 NCBI RefSeq GCF_000302515.1-RS_2026_04_03 2026-04-03 2508 2361 58 23405284 GCF_000302535.1 PRJNA224116 SAMN02604069 na na 358220 358220 Acidovorax sp. KKS102 strain=KKS102 na latest Complete Genome Major Full 2012-10-03 ASM30253v1 Tohoku University GCA_000302535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/535/GCF_000302535.1_ASM30253v1/ na na na haploid bacteria 5196935 5196935 65.000000 1 1 1 NCBI RefSeq GCF_000302535.1-RS_2024_08_13 2024-08-13 4881 4747 62 23209225 GCF_000302555.5 PRJNA224116 SAMN02604234 na na 1201032 197 Campylobacter jejuni subsp. jejuni PT14 strain=PT14 na latest Complete Genome Minor Full 2016-04-04 ASM30255v4 University of Nottingham GCA_000302555.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/555/GCF_000302555.5_ASM30255v4/ na na na haploid bacteria 1635301 1635301 30.500000 1 1 1 NCBI RefSeq GCF_000302555.5-RS_2025_05_23 2025-05-23 1687 1595 53 24265498;25601859 GCF_000302575.1 PRJNA224116 SAMN02603667 na na 1100841 470 Acinetobacter baumannii TYTH-1 strain=TYTH-1 na latest Complete Genome Major Full 2012-10-03 ASM30257v1 National Tsing Hua University GCA_000302575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/575/GCF_000302575.1_ASM30257v1/ na na na haploid bacteria 3957368 3957368 39.000000 1 1 1 NCBI RefSeq GCF_000302575.1-RS_2025_12_26 2025-12-26 3789 3611 91 23209228 GCF_000302595.1 PRJNA224116 SAMN02469613 AKZJ00000000.1 reference genome 1206103 752140 Pedobacter arcticus A12 strain=A12 na latest Scaffold Major Full 2012-10-10 ASM30259v1 Wuhan University GCA_000302595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/595/GCF_000302595.1_ASM30259v1/ na assembly from type material na haploid bacteria 4228921 4228288 37.000000 0 16 26 NCBI RefSeq GCF_000302595.1-RS_2025_12_11 2025-12-11 3581 3510 46 23144423 GCF_000302615.1 PRJNA224116 SAMN02469976 AKXV00000000.1 na 260742 260742 Streptomyces sp. SS strain=SS na latest Scaffold Major Full 2012-10-03 ASM30261v1 Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College GCA_000302615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/615/GCF_000302615.1_ASM30261v1/ na na na haploid bacteria 8119746 8118327 72.500000 0 69 87 NCBI RefSeq GCF_000302615.1-RS_2025_08_27 2025-08-27 7338 6846 74 23209237 GCF_000302635.2 PRJNA224116 SAMN02597471 AMRT00000000.2 na 652620 35790 Rickettsia japonica YH strain=YH na latest Contig Major Full 2013-12-02 ASM30263v2 Unite des Rickettsies, faculte de medicine GCA_000302635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/635/GCF_000302635.2_ASM30263v2/ na assembly from type material na haploid bacteria 1276675 1276675 32.500000 0 14 14 NCBI RefSeq GCF_000302635.2-RS_2026_01_09 2026-01-09 1466 1279 40 23209240 GCF_000302715.1 PRJNA224116 SAMN00794598 AMTP00000000.1 na 1005483 562 Escherichia coli FRIK920 strain=FRIK920 na latest Contig Major Full 2012-10-04 ASM30271v1 Institute for Genome Sciences GCA_000302715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/715/GCF_000302715.1_ASM30271v1/ na na na haploid bacteria 5741265 5741265 50.000000 0 127 127 NCBI RefSeq GCF_000302715.1-RS_2025_07_12 2025-07-12 6000 5435 121 na GCF_000302735.1 PRJNA224116 SAMN00794600 AMTQ00000000.1 na 1005491 562 Escherichia coli PA7 strain=PA7 na latest Contig Major Full 2012-10-04 ASM30273v1 Institute for Genome Sciences GCA_000302735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/735/GCF_000302735.1_ASM30273v1/ na na na haploid bacteria 5740657 5740657 50.500000 0 64 64 NCBI RefSeq GCF_000302735.1-RS_2025_06_14 2025-06-14 5808 5256 138 na GCF_000302755.1 PRJNA224116 SAMN00622023 ALDN00000000.1 na 991962 666 Vibrio cholerae HC-41A1 strain=HC-41A1 na latest Scaffold Major Full 2012-10-11 ASM30275v1 Institute for Genome Sciences GCA_000302755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/755/GCF_000302755.1_ASM30275v1/ na na na haploid bacteria 4027832 4016592 47.500000 0 116 274 NCBI RefSeq GCF_000302755.1-RS_2025_04_18 2025-04-18 3784 3595 76 na GCF_000302775.1 PRJNA224116 SAMN00622037 ALDM00000000.1 na 991960 666 Vibrio cholerae HC-39A1 strain=HC-39A1 na latest Scaffold Major Full 2012-10-11 ASM30277v1 Institute for Genome Sciences GCA_000302775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/775/GCF_000302775.1_ASM30277v1/ na na na haploid bacteria 4022430 4016773 47.500000 0 106 203 NCBI RefSeq GCF_000302775.1-RS_2026_06_30 2026-06-30 3726 3576 75 na GCF_000302795.1 PRJNA224116 SAMN02471968 AKCJ00000000.1 na 1154761 317 Pseudomonas syringae pv. avellanae str. ISPaVe013 strain=ISPaVe013 na latest Scaffold Major Full 2012-10-10 Pav013_1.0 University of Toronto Centre for the Analysis of Genome Evolution and Function GCA_000302795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/795/GCF_000302795.1_Pav013_1.0/ na na na haploid bacteria 6062183 5975428 59.000000 0 37 317 NCBI RefSeq GCF_000302795.1-RS_2026_03_28 2026-03-28 5504 5273 59 22800299 GCF_000302815.1 PRJNA224116 SAMN02471963 AKCK00000000.1 na 1154762 317 Pseudomonas syringae pv. avellanae str. ISPaVe037 strain=ISPaVe037 na latest Scaffold Major Full 2012-10-10 Pav037_1.0 University of Toronto Centre for the Analysis of Genome Evolution and Function GCA_000302815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/815/GCF_000302815.1_Pav037_1.0/ na na na haploid bacteria 5881053 5825140 59.000000 0 39 152 NCBI RefSeq GCF_000302815.1-RS_2026_01_02 2026-01-02 5301 5126 52 22800299 GCF_000302835.1 PRJNA224116 SAMN00622024 ALDS00000000.1 na 991967 666 Vibrio cholerae HC-50A1 strain=HC-50A1 na latest Scaffold Major Full 2012-10-11 ASM30283v1 Institute for Genome Sciences GCA_000302835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/835/GCF_000302835.1_ASM30283v1/ na na na haploid bacteria 3939222 3929723 48.000000 0 126 254 NCBI RefSeq GCF_000302835.1-RS_2026_01_11 2026-01-11 3706 3497 86 na GCF_000302855.1 PRJNA224116 SAMN00622043 ALDU00000000.1 na 991969 666 Vibrio cholerae HC-52A1 strain=HC-52A1 na latest Scaffold Major Full 2012-10-11 ASM30285v1 Institute for Genome Sciences GCA_000302855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/855/GCF_000302855.1_ASM30285v1/ na na na haploid bacteria 3937542 3927548 48.000000 0 133 271 NCBI RefSeq GCF_000302855.1-RS_2026_01_11 2026-01-11 3719 3512 84 na GCF_000302875.1 PRJNA224116 SAMN00622044 ALDV00000000.1 na 991970 666 Vibrio cholerae HC-55A1 strain=HC-55A1 na latest Scaffold Major Full 2012-10-11 ASM30287v1 Institute for Genome Sciences GCA_000302875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/875/GCF_000302875.1_ASM30287v1/ na na na haploid bacteria 3932130 3925908 48.000000 0 129 243 NCBI RefSeq GCF_000302875.1-RS_2026_01_11 2026-01-11 3689 3485 79 na GCF_000302895.1 PRJNA224116 SAMN00622040 ALDW00000000.1 na 991973 666 Vibrio cholerae HC-56A1 strain=HC-56A1 na latest Scaffold Major Full 2012-10-11 ASM30289v1 Institute for Genome Sciences GCA_000302895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/895/GCF_000302895.1_ASM30289v1/ na na na haploid bacteria 3934171 3928043 48.000000 0 123 217 NCBI RefSeq GCF_000302895.1-RS_2026_01_11 2026-01-11 3666 3482 78 na GCF_000302915.1 PRJNA224116 SAMN02471966 AKBS00000000.1 na 1154758 46257 Pseudomonas avellanae BPIC 631 strain=BPIC 631 na latest Scaffold Major Full 2012-10-10 Pav631_1.0 University of Toronto Centre for the Analysis of Genome Evolution and Function GCA_000302915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/915/GCF_000302915.1_Pav631_1.0/ na assembly from type material na haploid bacteria 6625623 5847426 58.500000 0 297 1602 NCBI RefSeq GCF_000302915.1-RS_2026_03_21 2026-03-21 5817 5312 35 22800299 GCF_000302965.1 PRJNA224116 SAMN00622034 ALDB00000000.1 na 991992 666 Vibrio cholerae CP1037(10) strain=CP1037(10) na latest Scaffold Major Full 2012-10-11 ASM30296v1 Institute for Genome Sciences GCA_000302965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/965/GCF_000302965.1_ASM30296v1/ na na na haploid bacteria 3922570 3916180 47.500000 0 78 175 NCBI RefSeq GCF_000302965.1-RS_2026_01_11 2026-01-11 3633 3492 79 26980836 GCF_000302985.1 PRJNA224116 SAMN00622026 ALDD00000000.1 na 991993 666 Vibrio cholerae CP1040(13) strain=CP1040 na latest Scaffold Major Full 2012-10-11 ASM30298v1 Institute for Genome Sciences GCA_000302985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/302/985/GCF_000302985.1_ASM30298v1/ na na na haploid bacteria 4033944 4027015 47.500000 0 105 226 NCBI RefSeq GCF_000302985.1-RS_2026_01_07 2026-01-07 3761 3588 70 na GCF_000303005.1 PRJNA224116 SAMN00622031 ALDY00000000.1 na 991975 666 Vibrio cholerae HC-57A1 strain=HC-57A1 na latest Scaffold Major Full 2012-10-11 ASM30300v1 Institute for Genome Sciences GCA_000303005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/005/GCF_000303005.1_ASM30300v1/ na na na haploid bacteria 3934427 3928259 48.000000 0 125 237 NCBI RefSeq GCF_000303005.1-RS_2026_01_11 2026-01-11 3689 3489 85 na GCF_000303025.2 PRJNA224116 SAMN02469699 na na 1231376 542 Zymomonas mobilis subsp. mobilis ATCC 31822 strain=ATCC 31822 na latest Complete Genome Major Full 2025-04-10 Zymomonas mobilis ZM401 Dalian University of Technology, China GCA_000303025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/025/GCF_000303025.2_Zymomonas_mobilis_ZM401/ na na na haploid bacteria 2200311 2200311 46.000000 5 5 5 NCBI RefSeq GCF_000303025.2-RS_2025_04_11 2025-04-11 1960 1874 63 23209250 GCF_000303045.1 PRJNA224116 SAMN00622048 ALDG00000000.1 na 991994 666 Vibrio cholerae CP1044(17) strain=CP1044(17) na latest Scaffold Major Full 2012-10-11 ASM30304v1 Institute for Genome Sciences GCA_000303045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/045/GCF_000303045.1_ASM30304v1/ na na na haploid bacteria 4010199 4002477 47.500000 0 135 247 NCBI RefSeq GCF_000303045.1-RS_2026_01_11 2026-01-11 3750 3580 67 na GCF_000303065.1 PRJNA224116 SAMN00622047 ALDK00000000.1 na 991996 666 Vibrio cholerae CP1050(23) strain=CP1050 na latest Scaffold Major Full 2012-10-11 ASM30306v1 Institute for Genome Sciences GCA_000303065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/065/GCF_000303065.1_ASM30306v1/ na na na haploid bacteria 4024004 4018644 47.500000 0 114 251 NCBI RefSeq GCF_000303065.1-RS_2026_01_07 2026-01-07 3787 3595 81 na GCF_000303085.1 PRJNA224116 SAMN00622032 ALEB00000000.1 na 2867485 650003 Vibrio paracholerae HE-16 strain=HE-16 na latest Scaffold Major Full 2012-10-11 ASM30308v1 Institute for Genome Sciences GCA_000303085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/085/GCF_000303085.1_ASM30308v1/ na na na haploid bacteria 3911386 3905537 47.000000 0 236 326 NCBI RefSeq GCF_000303085.1-RS_2026_01_11 2026-01-11 3664 3467 78 na GCF_000303105.1 PRJNA224116 SAMN00622042 ALDT00000000.1 na 992004 666 Vibrio cholerae HC-51A1 strain=HC-51A1 na latest Scaffold Major Full 2012-10-11 ASM30310v1 Institute for Genome Sciences GCA_000303105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/105/GCF_000303105.1_ASM30310v1/ na na na haploid bacteria 3929843 3924355 48.000000 0 140 249 NCBI RefSeq GCF_000303105.1-RS_2026_01_11 2026-01-11 3680 3494 72 na GCF_000303125.1 PRJNA224116 SAMN00622045 ALEA00000000.1 na 1000951 666 Vibrio cholerae HC-81A2 strain=HC-81A2 na latest Scaffold Major Full 2012-10-11 ASM30312v1 Institute for Genome Sciences GCA_000303125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/125/GCF_000303125.1_ASM30312v1/ na na na haploid bacteria 4028931 4020608 47.500000 0 98 209 NCBI RefSeq GCF_000303125.1-RS_2026_07_01 2026-07-01 3739 3585 78 na GCF_000303155.1 PRJNA224116 SAMN02603264 na reference genome 1237085 497727 Candidatus Nitrososphaera gargensis Ga9.2 na enrichment culture Ga9.2 latest Complete Genome Major Full 2012-10-05 ASM30315v1 Georg-August-University Goettingen GCA_000303155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/155/GCF_000303155.1_ASM30315v1/ na na na haploid archaea 2833868 2833868 48.500000 1 1 1 NCBI RefSeq GCF_000303155.1-RS_2025_12_09 2025-12-09 3649 3538 51 23057602 GCF_000303175.1 PRJNA224116 SAMN02471155 AMQR00000000.1 na 1229202 672 Vibrio vulnificus B2 strain=B2 na latest Contig Major Full 2012-10-05 C224contig Zhejiang University GCA_000303175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/175/GCF_000303175.1_C224contig/ na na na haploid bacteria 4664000 4664000 46.500000 0 193 193 NCBI RefSeq GCF_000303175.1-RS_2025_07_31 2025-07-31 4143 3988 83 23209257 GCF_000303195.2 PRJNA242845 SAMN02981337 AFNW00000000.1 reference genome 1028729 101028 Fusarium pseudograminearum CS3096 strain=CS3096 na latest Chromosome Major Full 2015-04-15 FP7 CSIRO GCA_000303195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/195/GCF_000303195.2_FP7/ na na na haploid fungi 36863345 36825645 48.000000 4 279 656 CSIRO Annotation submitted by CSIRO 2024-01-17 12445 12445 0 23028337 GCF_000303235.2 PRJNA224116 SAMN00808720 AMVK00000000.1 na 1005441 562 Escherichia coli 0.1304 strain=0.1304 na latest Scaffold Minor Full 2012-10-12 ASM30323v2 Institute for Genome Sciences GCA_000303235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/235/GCF_000303235.2_ASM30323v2/ na na na haploid bacteria 5368321 5366154 50.500000 0 507 542 NCBI RefSeq GCF_000303235.2-RS_2025_06_16 2025-06-16 5736 5177 102 na GCF_000303255.2 PRJNA224116 SAMN00808719 AMVJ00000000.1 na 1005442 562 Escherichia coli 0.1288 strain=0.1288 na latest Scaffold Minor Full 2012-10-12 ASM30325v2 Institute for Genome Sciences GCA_000303255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/255/GCF_000303255.2_ASM30325v2/ na na na haploid bacteria 4945604 4944463 50.500000 0 135 169 NCBI RefSeq GCF_000303255.2-RS_2025_06_17 2025-06-17 4900 4596 95 na GCF_000303275.2 PRJNA224116 SAMN00808722 AMVI00000000.1 na 1005482 562 Escherichia coli FRIK523 strain=FRIK523 na latest Scaffold Minor Full 2012-10-12 ASM30327v2 Institute for Genome Sciences GCA_000303275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/275/GCF_000303275.2_ASM30327v2/ na na na haploid bacteria 5466678 5464570 50.500000 0 467 503 NCBI RefSeq GCF_000303275.2-RS_2025_06_17 2025-06-17 5819 5278 102 na GCF_000303295.2 PRJNA224116 SAMN00808718 AMVH00000000.1 na 1005486 562 Escherichia coli NE098 strain=NE098 na latest Scaffold Minor Full 2012-10-12 ASM30329v2 Institute for Genome Sciences GCA_000303295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/295/GCF_000303295.2_ASM30329v2/ na na na haploid bacteria 5322853 5322074 50.500000 0 448 470 NCBI RefSeq GCF_000303295.2-RS_2025_06_17 2025-06-17 5547 5070 87 na GCF_000303315.2 PRJNA224116 SAMN00808717 AMVG00000000.1 na 1005554 562 Escherichia coli EC1870 strain=EC1870 na latest Scaffold Minor Full 2012-10-12 ASM30331v2 Institute for Genome Sciences GCA_000303315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/315/GCF_000303315.2_ASM30331v2/ na na na haploid bacteria 5457488 5454676 50.000000 0 465 541 NCBI RefSeq GCF_000303315.2-RS_2025_06_15 2025-06-15 5826 5262 106 na GCF_000303335.2 PRJNA224116 SAMN00808716 AMVF00000000.1 na 1005553 562 Escherichia coli EC1869 strain=EC1869 na latest Scaffold Minor Full 2012-10-12 ASM30333v2 Institute for Genome Sciences GCA_000303335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/335/GCF_000303335.2_ASM30333v2/ na na na haploid bacteria 5405121 5402944 50.500000 0 410 464 NCBI RefSeq GCF_000303335.2-RS_2025_06_16 2025-06-16 5733 5196 106 na GCF_000303355.2 PRJNA224116 SAMN00808714 AMVE00000000.1 na 1005552 562 Escherichia coli EC1868 strain=EC1868 na latest Scaffold Minor Full 2012-10-12 ASM30335v2 Institute for Genome Sciences GCA_000303355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/355/GCF_000303355.2_ASM30335v2/ na na na haploid bacteria 5468582 5465732 50.500000 0 417 474 NCBI RefSeq GCF_000303355.2-RS_2025_06_17 2025-06-17 5829 5260 106 na GCF_000303375.2 PRJNA224116 SAMN00808715 AMVD00000000.1 na 1005551 562 Escherichia coli EC1866 strain=EC1866 na latest Scaffold Minor Full 2012-10-12 ASM30337v2 Institute for Genome Sciences GCA_000303375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/375/GCF_000303375.2_ASM30337v2/ na na na haploid bacteria 5402434 5400180 50.500000 0 394 460 NCBI RefSeq GCF_000303375.2-RS_2025_06_16 2025-06-16 5717 5178 107 na GCF_000303395.2 PRJNA224116 SAMN00808713 AMVC00000000.1 na 1005550 562 Escherichia coli EC1865 strain=EC1865 na latest Scaffold Minor Full 2012-10-12 ASM30339v2 Institute for Genome Sciences GCA_000303395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/395/GCF_000303395.2_ASM30339v2/ na na na haploid bacteria 5603705 5598956 50.500000 0 648 787 NCBI RefSeq GCF_000303395.2-RS_2025_06_17 2025-06-17 6250 5643 108 na GCF_000303415.2 PRJNA224116 SAMN00808712 AMVB00000000.1 na 1005549 562 Escherichia coli EC1864 strain=EC1864 na latest Scaffold Minor Full 2012-10-12 ASM30341v2 Institute for Genome Sciences GCA_000303415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/415/GCF_000303415.2_ASM30341v2/ na na na haploid bacteria 5395394 5391735 50.500000 0 399 468 NCBI RefSeq GCF_000303415.2-RS_2025_06_17 2025-06-17 5712 5190 102 na GCF_000303435.2 PRJNA224116 SAMN00808711 AMVA00000000.1 na 1005547 562 Escherichia coli EC1862 strain=EC1862 na latest Scaffold Minor Full 2012-10-12 ASM30343v2 Institute for Genome Sciences GCA_000303435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/435/GCF_000303435.2_ASM30343v2/ na na na haploid bacteria 5322810 5319133 50.500000 0 587 660 NCBI RefSeq GCF_000303435.2-RS_2025_06_16 2025-06-16 5729 5135 100 na GCF_000303455.2 PRJNA224116 SAMN00808710 AMUZ00000000.1 na 1005546 562 Escherichia coli EC1856 strain=EC1856 na latest Scaffold Minor Full 2012-10-12 ASM30345v2 Institute for Genome Sciences GCA_000303455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/455/GCF_000303455.2_ASM30345v2/ na na na haploid bacteria 5376681 5373598 50.500000 0 390 453 NCBI RefSeq GCF_000303455.2-RS_2025_06_15 2025-06-15 5698 5169 111 na GCF_000303475.2 PRJNA224116 SAMN00808709 AMUY00000000.1 na 1005545 562 Escherichia coli EC1850 strain=EC1850 na latest Scaffold Minor Full 2012-10-12 ASM30347v2 Institute for Genome Sciences GCA_000303475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/475/GCF_000303475.2_ASM30347v2/ na na na haploid bacteria 5372588 5369253 50.500000 0 393 456 NCBI RefSeq GCF_000303475.2-RS_2025_06_15 2025-06-15 5708 5174 108 na GCF_000303495.2 PRJNA224116 SAMN00808708 AMUX00000000.1 na 1005544 562 Escherichia coli EC1849 strain=EC1849 na latest Scaffold Minor Full 2012-10-12 ASM30349v2 Institute for Genome Sciences GCA_000303495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/495/GCF_000303495.2_ASM30349v2/ na na na haploid bacteria 5356742 5353863 50.500000 0 425 487 NCBI RefSeq GCF_000303495.2-RS_2025_06_15 2025-06-15 5667 5150 101 na GCF_000303515.2 PRJNA224116 SAMN00808707 AMUW00000000.1 na 1005543 562 Escherichia coli EC1848 strain=EC1848 na latest Scaffold Minor Full 2012-10-12 ASM30351v2 Institute for Genome Sciences GCA_000303515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/515/GCF_000303515.2_ASM30351v2/ na na na haploid bacteria 5369585 5366506 50.500000 0 391 446 NCBI RefSeq GCF_000303515.2-RS_2025_06_15 2025-06-15 5688 5157 108 na GCF_000303535.2 PRJNA224116 SAMN00808706 AMUV00000000.1 na 1005542 562 Escherichia coli EC1847 strain=EC1847 na latest Scaffold Minor Full 2012-10-12 ASM30353v2 Institute for Genome Sciences GCA_000303535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/535/GCF_000303535.2_ASM30353v2/ na na na haploid bacteria 5346717 5344144 50.500000 0 469 526 NCBI RefSeq GCF_000303535.2-RS_2025_06_17 2025-06-17 5674 5139 99 na GCF_000303555.2 PRJNA224116 SAMN00808704 AMUU00000000.1 na 1005541 562 Escherichia coli EC1846 strain=EC1846 na latest Scaffold Minor Full 2012-10-12 ASM30355v2 Institute for Genome Sciences GCA_000303555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/555/GCF_000303555.2_ASM30355v2/ na na na haploid bacteria 5351715 5348684 50.500000 0 494 549 NCBI RefSeq GCF_000303555.2-RS_2025_06_16 2025-06-16 5715 5160 102 na GCF_000303575.2 PRJNA224116 SAMN00808703 AMUT00000000.1 na 1005539 562 Escherichia coli EC1737 strain=EC1737 na latest Scaffold Minor Full 2012-10-12 ASM30357v2 Institute for Genome Sciences GCA_000303575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/575/GCF_000303575.2_ASM30357v2/ na na na haploid bacteria 5368141 5365621 50.500000 0 440 499 NCBI RefSeq GCF_000303575.2-RS_2024_06_11 2024-06-11 5641 5117 96 na GCF_000303595.2 PRJNA224116 SAMN00808702 AMUS00000000.1 na 1005538 562 Escherichia coli EC1736 strain=EC1736 na latest Scaffold Minor Full 2012-10-12 ASM30359v2 Institute for Genome Sciences GCA_000303595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/595/GCF_000303595.2_ASM30359v2/ na na na haploid bacteria 5376437 5374207 50.500000 0 382 426 NCBI RefSeq GCF_000303595.2-RS_2025_06_17 2025-06-17 5643 5133 98 na GCF_000303615.2 PRJNA224116 SAMN00808701 AMUR00000000.1 na 1005537 562 Escherichia coli EC1735 strain=EC1735 na latest Scaffold Minor Full 2012-10-12 ASM30361v2 Institute for Genome Sciences GCA_000303615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/615/GCF_000303615.2_ASM30361v2/ na na na haploid bacteria 5370455 5368352 50.500000 0 389 429 NCBI RefSeq GCF_000303615.2-RS_2024_06_11 2024-06-11 5638 5122 94 na GCF_000303635.2 PRJNA224116 SAMN00808700 AMUQ00000000.1 na 1005567 562 Escherichia coli N1 strain=N1 na latest Scaffold Minor Full 2012-10-12 ASM30363v2 Institute for Genome Sciences GCA_000303635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/635/GCF_000303635.2_ASM30363v2/ na na na haploid bacteria 4959494 4957818 50.500000 0 304 333 NCBI RefSeq GCF_000303635.2-RS_2025_06_17 2025-06-17 4962 4571 87 na GCF_000303655.2 PRJNA224116 SAMN00808699 AMUP00000000.1 na 1005566 562 Escherichia coli 07798 strain=7798 na latest Scaffold Minor Full 2012-10-12 ASM30365v2 Institute for Genome Sciences GCA_000303655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/655/GCF_000303655.2_ASM30365v2/ na na na haploid bacteria 4904373 4902399 50.500000 0 224 248 NCBI RefSeq GCF_000303655.2-RS_2025_02_11 2025-02-11 5113 4729 99 na GCF_000303675.2 PRJNA224116 SAMN00794576 AMUO00000000.1 na 1005506 562 Escherichia coli PA38 strain=PA38 na latest Scaffold Minor Full 2012-10-12 ASM30367v2 Institute for Genome Sciences GCA_000303675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/675/GCF_000303675.2_ASM30367v2/ na na na haploid bacteria 5265076 5263326 50.500000 0 578 605 NCBI RefSeq GCF_000303675.2-RS_2025_06_17 2025-06-17 5601 5010 100 na GCF_000303695.2 PRJNA224116 SAMN00794575 AMTR00000000.1 na 1005505 562 Escherichia coli PA34 strain=PA34 na latest Scaffold Minor Full 2012-10-12 ASM30369v2 Institute for Genome Sciences GCA_000303695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/695/GCF_000303695.2_ASM30369v2/ na na na haploid bacteria 5381144 5379005 50.500000 0 354 391 NCBI RefSeq GCF_000303695.2-RS_2025_06_17 2025-06-17 5627 5108 102 na GCF_000303715.2 PRJNA224116 SAMN00794577 AMTS00000000.1 na 1005474 562 Escherichia coli FDA506 strain=FDA506 na latest Scaffold Minor Full 2012-10-12 ASM30371v2 Institute for Genome Sciences GCA_000303715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/715/GCF_000303715.2_ASM30371v2/ na na na haploid bacteria 5331138 5329040 50.000000 0 349 377 NCBI RefSeq GCF_000303715.2-RS_2025_06_17 2025-06-17 5520 5025 102 na GCF_000303735.2 PRJNA224116 SAMN00794578 AMTT00000000.1 na 1005472 562 Escherichia coli FDA507 strain=FDA507 na latest Scaffold Minor Full 2012-10-12 ASM30373v2 Institute for Genome Sciences GCA_000303735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/735/GCF_000303735.2_ASM30373v2/ na na na haploid bacteria 5372012 5368824 50.500000 0 402 445 NCBI RefSeq GCF_000303735.2-RS_2025_06_17 2025-06-17 5661 5140 111 na GCF_000303755.2 PRJNA224116 SAMN00794580 AMTU00000000.1 na 1005470 562 Escherichia coli FDA504 strain=FDA504 na latest Scaffold Minor Full 2012-10-12 ASM30375v2 Institute for Genome Sciences GCA_000303755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/755/GCF_000303755.2_ASM30375v2/ na na na haploid bacteria 5292415 5289254 50.500000 0 352 394 NCBI RefSeq GCF_000303755.2-RS_2025_06_16 2025-06-16 5538 5041 107 na GCF_000303775.2 PRJNA224116 SAMN00794579 AMTV00000000.1 na 1005477 562 Escherichia coli FRIK1999 strain=FRIK1999 na latest Scaffold Minor Full 2012-10-12 ASM30377v2 Institute for Genome Sciences GCA_000303775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/775/GCF_000303775.2_ASM30377v2/ na na na haploid bacteria 5424837 5420553 50.500000 0 419 479 NCBI RefSeq GCF_000303775.2-RS_2025_06_16 2025-06-16 5791 5223 104 na GCF_000303795.2 PRJNA224116 SAMN00794581 AMTW00000000.1 na 1005480 562 Escherichia coli FRIK1997 strain=FRIK1997 na latest Scaffold Minor Full 2012-10-12 ASM30379v2 Institute for Genome Sciences GCA_000303795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/795/GCF_000303795.2_ASM30379v2/ na na na haploid bacteria 5588337 5585452 50.500000 0 496 547 NCBI RefSeq GCF_000303795.2-RS_2025_06_17 2025-06-17 6013 5411 105 na GCF_000303815.2 PRJNA224116 SAMN00794582 AMTX00000000.1 na 1005485 562 Escherichia coli NE1487 strain=NE1487 na latest Scaffold Minor Full 2012-10-12 ASM30381v2 Institute for Genome Sciences GCA_000303815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/815/GCF_000303815.2_ASM30381v2/ na na na haploid bacteria 5394731 5390909 50.500000 0 429 480 NCBI RefSeq GCF_000303815.2-RS_2025_06_17 2025-06-17 5736 5202 106 na GCF_000303835.2 PRJNA224116 SAMN00794583 AMTY00000000.1 na 1005484 562 Escherichia coli NE037 strain=NE037 na latest Scaffold Minor Full 2012-10-12 ASM30383v2 Institute for Genome Sciences GCA_000303835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/835/GCF_000303835.2_ASM30383v2/ na na na haploid bacteria 5471649 5467607 50.000000 0 539 603 NCBI RefSeq GCF_000303835.2-RS_2025_06_16 2025-06-16 5916 5299 112 na GCF_000303855.2 PRJNA224116 SAMN00794584 AMTZ00000000.1 na 1005479 562 Escherichia coli FRIK2001 strain=FRIK2001 na latest Scaffold Minor Full 2012-10-12 ASM30385v2 Institute for Genome Sciences GCA_000303855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/855/GCF_000303855.2_ASM30385v2/ na na na haploid bacteria 5404170 5399796 50.500000 0 400 452 NCBI RefSeq GCF_000303855.2-RS_2024_06_11 2024-06-11 5734 5217 106 na GCF_000303875.2 PRJNA224116 SAMN00794585 AMUA00000000.1 na 1005489 562 Escherichia coli PA4 strain=PA4 na latest Scaffold Minor Full 2012-10-12 ASM30387v2 Institute for Genome Sciences GCA_000303875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/875/GCF_000303875.2_ASM30387v2/ na na na haploid bacteria 5455035 5451580 50.000000 0 411 454 NCBI RefSeq GCF_000303875.2-RS_2025_06_17 2025-06-17 5774 5268 103 na GCF_000303895.2 PRJNA224116 SAMN00794586 AMUB00000000.1 na 1005498 562 Escherichia coli PA23 strain=PA23 na latest Scaffold Minor Full 2012-10-12 ASM30389v2 Institute for Genome Sciences GCA_000303895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/895/GCF_000303895.2_ASM30389v2/ na na na haploid bacteria 5412826 5409058 50.500000 0 427 474 NCBI RefSeq GCF_000303895.2-RS_2025_06_17 2025-06-17 5732 5190 110 na GCF_000303915.2 PRJNA224116 SAMN00794587 AMUC00000000.1 na 1005514 562 Escherichia coli PA49 strain=PA49 na latest Scaffold Minor Full 2012-10-12 ASM30391v2 Institute for Genome Sciences GCA_000303915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/915/GCF_000303915.2_ASM30391v2/ na na na haploid bacteria 5492181 5487348 50.500000 0 472 530 NCBI RefSeq GCF_000303915.2-RS_2025_06_17 2025-06-17 5841 5304 107 na GCF_000303935.2 PRJNA224116 SAMN00794588 AMUD00000000.1 na 1005511 562 Escherichia coli PA45 strain=PA45 na latest Scaffold Minor Full 2012-10-12 ASM30393v2 Institute for Genome Sciences GCA_000303935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/935/GCF_000303935.2_ASM30393v2/ na na na haploid bacteria 5396846 5394918 50.500000 0 424 452 NCBI RefSeq GCF_000303935.2-RS_2025_06_17 2025-06-17 5718 5189 112 na GCF_000303955.2 PRJNA224116 SAMN00794595 AMUE00000000.1 na 1005555 562 Escherichia coli TT12B strain=TT12B na latest Scaffold Minor Full 2012-10-12 ASM30395v2 Institute for Genome Sciences GCA_000303955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/955/GCF_000303955.2_ASM30395v2/ na na na haploid bacteria 5296520 5292760 50.500000 0 310 356 NCBI RefSeq GCF_000303955.2-RS_2025_06_17 2025-06-17 5467 4997 103 na GCF_000303975.2 PRJNA224116 SAMN00794597 AMUF00000000.1 na 1005557 562 Escherichia coli MA6 strain=MA6 na latest Scaffold Minor Full 2012-10-12 ASM30397v2 Institute for Genome Sciences GCA_000303975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/975/GCF_000303975.2_ASM30397v2/ na na na haploid bacteria 5381508 5377681 50.000000 0 402 452 NCBI RefSeq GCF_000303975.2-RS_2025_06_16 2025-06-16 5701 5174 103 na GCF_000303995.2 PRJNA224116 SAMN00794592 AMUG00000000.1 na 1005558 562 Escherichia coli 5905 strain=5905 na latest Scaffold Minor Full 2012-10-12 ASM30399v2 Institute for Genome Sciences GCA_000303995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/303/995/GCF_000303995.2_ASM30399v2/ na na na haploid bacteria 5515235 5511669 50.500000 0 350 400 NCBI RefSeq GCF_000303995.2-RS_2025_06_16 2025-06-16 5802 5246 111 na GCF_000304015.2 PRJNA224116 SAMN00794589 AMUH00000000.1 na 1005559 562 Escherichia coli CB7326 strain=CB7326 na latest Scaffold Minor Full 2012-10-12 ASM30401v2 Institute for Genome Sciences GCA_000304015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/015/GCF_000304015.2_ASM30401v2/ na na na haploid bacteria 5392684 5390171 50.000000 0 471 523 NCBI RefSeq GCF_000304015.2-RS_2025_06_17 2025-06-17 5712 5183 98 na GCF_000304035.2 PRJNA224116 SAMN00794594 AMUI00000000.1 na 1005560 562 Escherichia coli EC96038 strain=EC96038 na latest Scaffold Minor Full 2012-10-12 ASM30403v2 Institute for Genome Sciences GCA_000304035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/035/GCF_000304035.2_ASM30403v2/ na na na haploid bacteria 5316056 5313781 50.500000 0 463 503 NCBI RefSeq GCF_000304035.2-RS_2024_06_11 2024-06-11 5623 5058 100 na GCF_000304055.2 PRJNA224116 SAMN02435973 AMUJ00000000.1 na 1005561 562 Escherichia coli 5412 strain=5412 na latest Scaffold Minor Full 2012-10-12 ASM30405v2 Institute for Genome Sciences GCA_000304055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/055/GCF_000304055.2_ASM30405v2/ na na na haploid bacteria 5381042 5378075 50.500000 0 372 415 NCBI RefSeq GCF_000304055.2-RS_2025_06_15 2025-06-15 5676 5179 97 na GCF_000304075.2 PRJNA224116 SAMN00794593 AMUK00000000.1 na 1005562 562 Escherichia coli TW15901 strain=TW15901 na latest Scaffold Minor Full 2012-10-12 ASM30407v2 Institute for Genome Sciences GCA_000304075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/075/GCF_000304075.2_ASM30407v2/ na na na haploid bacteria 4897883 4895349 50.500000 0 206 247 NCBI RefSeq GCF_000304075.2-RS_2025_06_17 2025-06-17 5039 4604 103 na GCF_000304095.2 PRJNA224116 SAMN00806481 AMUL00000000.1 na 1005563 562 Escherichia coli ARS4.2123 strain=ARS4.2123 na latest Scaffold Minor Full 2012-10-12 ASM30409v2 Institute for Genome Sciences GCA_000304095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/095/GCF_000304095.2_ASM30409v2/ na na na haploid bacteria 4977300 4975440 50.500000 0 208 244 NCBI RefSeq GCF_000304095.2-RS_2025_06_17 2025-06-17 5145 4803 94 na GCF_000304115.2 PRJNA224116 SAMN00794596 AMUM00000000.1 na 1005564 562 Escherichia coli TW00353 strain=TW00353 na latest Scaffold Minor Full 2012-10-12 ASM30411v2 Institute for Genome Sciences GCA_000304115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/115/GCF_000304115.2_ASM30411v2/ na na na haploid bacteria 5006403 5004233 50.500000 0 184 227 NCBI RefSeq GCF_000304115.2-RS_2025_06_16 2025-06-16 5162 4737 103 na GCF_000304135.2 PRJNA224116 SAMN00794590 AMUN00000000.1 na 1005565 562 Escherichia coli 3006 strain=3006 na latest Scaffold Minor Full 2012-10-12 ASM30413v2 Institute for Genome Sciences GCA_000304135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/135/GCF_000304135.2_ASM30413v2/ na na na haploid bacteria 5057568 5056225 50.500000 0 294 319 NCBI RefSeq GCF_000304135.2-RS_2025_06_15 2025-06-15 5224 4802 95 na GCF_000304195.1 PRJNA224116 SAMN02463931 AGXW00000000.1 na 997888 338188 Bacteroides finegoldii CL09T03C10 strain=CL09T03C10 na latest Scaffold Major Full 2012-10-11 Bact_thet_CL09T03C10_V1 Broad Institute GCA_000304195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/195/GCF_000304195.1_Bact_thet_CL09T03C10_V1/ na na na haploid bacteria 5115628 5097678 42.500000 0 6 16 NCBI RefSeq GCF_000304195.1-RS_2025_01_07 2025-01-07 4231 4020 109 na GCF_000304215.1 PRJNA224116 SAMN02604114 na na 1147128 1684 Bifidobacterium asteroides PRL2011 strain=PRL2011 na latest Complete Genome Major Full 2012-10-09 ASM30421v1 University College Cork GCA_000304215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/215/GCF_000304215.1_ASM30421v1/ na na na haploid bacteria 2167304 2167304 60.000000 1 1 1 NCBI RefSeq GCF_000304215.1-RS_2026_03_30 2026-03-30 1742 1650 54 23028506 GCF_000304255.1 PRJNA224116 SAMN02470904 AMSK00000000.1 na 1169664 562 Escherichia coli AD30 strain=AD30 na latest Contig Major Full 2012-10-09 ECAD30.1 Seoul National University GCA_000304255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/255/GCF_000304255.1_ECAD30.1/ na na na haploid bacteria 5077949 5077949 50.500000 0 117 117 NCBI RefSeq GCF_000304255.1-RS_2025_06_15 2025-06-15 5034 4691 78 na GCF_000304275.1 PRJNA224116 SAMN02436259 AKXE00000000.1 na 1193051 29508 Leptospira meyeri serovar Hardjo str. Went 5 strain=Went 5 na latest Contig Major Full 2012-10-09 gls454017v1.0 J. Craig Venter Institute GCA_000304275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/275/GCF_000304275.1_gls454017v1.0/ na na na haploid bacteria 4188061 4188061 38.000000 0 7 7 NCBI RefSeq GCF_000304275.1-RS_2026_03_30 2026-03-30 3906 3840 43 na GCF_000304295.1 PRJNA224116 SAMN00004588 na na 686990 160 Treponema pallidum subsp. pallidum str. Mexico A strain=Mexico A na latest Chromosome Major Full 2012-10-09 ASM30429v1 Baylor College of Medicine GCA_000304295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/295/GCF_000304295.1_ASM30429v1/ na na na haploid bacteria 1140038 1139714 53.000000 1 1 7 NCBI RefSeq GCF_000304295.1-RS_2026_04_03 2026-04-03 1043 981 54 23029591 GCF_000304315.1 PRJNA224116 SAMEA2272070 na reference genome 187303 187303 Methylocystis hydrogenophila strain=SC2 na latest Complete Genome Major Full 2012-08-20 Msp_SC2 Max Planck Institute for Terrestrial Microbiology GCA_000304315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/315/GCF_000304315.1_Msp_SC2/ na assembly from type material na haploid bacteria 3773444 3773444 63.500000 1 1 1 NCBI RefSeq GCF_000304315.1-RS_2026_03_11 2026-03-11 3668 3582 53 23045511 GCF_000304335.1 PRJNA224116 SAMEA3138423 CAJF00000000.1 na 1194165 671622 Microbacterium yannicii PS01 strain=PS01 na latest Contig Major Full 2012-06-21 My_PS01 URMITE GCA_000304335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/335/GCF_000304335.1_My_PS01/ na na na haploid bacteria 3952501 3952501 69.500000 0 67 67 NCBI RefSeq GCF_000304335.1-RS_2025_04_15 2025-04-15 3721 3608 54 22887680 GCF_000304355.2 PRJNA224116 SAMEA2272323 na reference genome 1201294 83986 Methanoculleus bourgensis MS2 strain=type strain:MS2 na latest Complete Genome Major Full 2014-02-04 Mb_MS2 irena.maus GCA_000304355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/355/GCF_000304355.2_Mb_MS2/ na assembly from type material na haploid archaea 2789774 2789774 60.500000 1 1 1 NCBI RefSeq GCF_000304355.2-RS_2025_11_20 2025-11-20 2700 2635 52 na GCF_000304375.1 PRJNA224116 SAMEA2271917 na na 1211776 197 Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 strain=NCTC 11168-BN148 na latest Complete Genome Major Full 2012-08-20 AINO University of Helsinki GCA_000304375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/375/GCF_000304375.1_AINO/ na na na haploid bacteria 1641481 1641481 30.500000 1 1 1 NCBI RefSeq GCF_000304375.1-RS_2025_06_27 2025-06-27 1701 1605 56 23105049 GCF_000304395.1 PRJNA224116 SAMEA2271990 CAIU00000000.1 na 1192868 93369 Pseudaminobacter salicylatoxidans KCT001 strain=KCT001 na latest Contig Major Full 2012-06-06 KCT001.1 Bose Inst GCA_000304395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/395/GCF_000304395.1_KCT001.1/ na na na haploid bacteria 4612407 4612407 63.000000 0 53 53 NCBI RefSeq GCF_000304395.1-RS_2026_04_23 2026-04-23 4524 4148 61 na GCF_000304415.1 PRJNA224116 SAMEA2272434 na na 1230587 382 Sinorhizobium meliloti Rm41 strain=Rm41 na latest Complete Genome Major Full 2012-09-28 RM41 CeBiTec, Bielefeld University GCA_000304415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/415/GCF_000304415.1_RM41/ na na na haploid bacteria 7149690 7149690 62.000000 4 4 4 NCBI RefSeq GCF_000304415.1-RS_2026_04_23 2026-04-23 6881 6515 70 na GCF_000304455.1 PRJNA224116 SAMEA2272294 na reference genome 1231626 249402 Cardinium endosymbiont cEper1 of Encarsia pergandiella strain=cEper1 na latest Complete Genome Major Full 2012-09-13 CCh_cEper1 University of Vienna GCA_000304455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/455/GCF_000304455.1_CCh_cEper1/ na na na haploid bacteria 944930 944930 36.500000 2 2 2 NCBI RefSeq GCF_000304455.1-RS_2026_03_31 2026-03-31 846 751 42 23133394 GCF_000304475.1 PRJNA178246 SAMEA2272790 na reference genome 1071382 432096 Kazachstania africana CBS 2517 strain=type strain:CBS 2517 na latest Chromosome Major Full 2012-01-17 Ka_CBS2517 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000304475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/475/GCF_000304475.1_Ka_CBS2517/ na assembly from type material na haploid fungi 11130140 11126917 36.500000 12 12 34 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5646 5375 271 22123960 GCF_000304495.1 PRJNA224116 SAMEA2272525 na na 1071759 813 Chlamydia trachomatis E/SW3 strain=E/SW3 na latest Complete Genome Major Full 2012-03-13 Cm_ESW3 Sanger Institute GCA_000304495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/495/GCF_000304495.1_Cm_ESW3/ na na na haploid bacteria 1042903 1042903 41.500000 1 1 1 NCBI RefSeq GCF_000304495.1-RS_2025_07_01 2025-07-01 951 892 46 22406642 GCF_000304515.1 PRJNA224116 SAMEA2272343 na na 1071762 813 Chlamydia trachomatis F/SW4 strain=F/SW4 na latest Complete Genome Major Full 2012-03-13 Cm_FSW4 Sanger Institute GCA_000304515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/515/GCF_000304515.1_Cm_FSW4/ na na na haploid bacteria 1042736 1042736 41.500000 1 1 1 NCBI RefSeq GCF_000304515.1-RS_2025_07_01 2025-07-01 951 892 46 22406642 GCF_000304535.1 PRJNA224116 SAMEA2272682 na na 1071763 813 Chlamydia trachomatis F/SW5 strain=F/SW5 na latest Complete Genome Major Full 2012-03-13 Cm_FSW5 Sanger Institute GCA_000304535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/535/GCF_000304535.1_Cm_FSW5/ na na na haploid bacteria 1042743 1042743 41.500000 1 1 1 NCBI RefSeq GCF_000304535.1-RS_2025_07_01 2025-07-01 951 894 46 22406642 GCF_000304555.1 PRJNA224116 SAMEA2272432 na na 1097669 1773 Mycobacterium tuberculosis UT205 strain=UT205 na latest Chromosome Major Full 2012-02-24 Mt_UT205 CNSG, CCITB GCA_000304555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/555/GCF_000304555.1_Mt_UT205/ na na na haploid bacteria 4418088 4270984 65.500000 1 1 158 NCBI RefSeq GCF_000304555.1-RS_2025_06_29 2025-06-29 4186 3903 51 22404577 GCF_000304595.1 PRJNA224116 SAMN02470626 AMQQ00000000.1 na 1229491 136996 Bradyrhizobium lupini HPC(L) strain=HPC(L) na latest Contig Major Full 2012-10-09 ASM30459v1 National Environmental Engineering Research Institute GCA_000304595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/595/GCF_000304595.1_ASM30459v1/ na na na haploid bacteria 5272243 5272243 59.000000 0 90 90 NCBI RefSeq GCF_000304595.1-RS_2026_03_21 2026-03-21 5061 4364 63 23405347 GCF_000304635.1 PRJNA224116 SAMN02261078 AMCW00000000.1 na 993517 265606 Rhodopirellula baltica SH28 strain=SH28 na latest Contig Major Full 2012-10-09 ASM30463v1 Microbial Interactions in MArine Systems (MIMAS) GCA_000304635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/635/GCF_000304635.1_ASM30463v1/ na na na haploid bacteria 7149689 7149689 55.500000 0 178 178 NCBI RefSeq GCF_000304635.1-RS_2025_11_24 2025-11-24 5324 5196 72 23273849 GCF_000304655.1 PRJNA224116 SAMN00761222 AMEJ00000000.1 na 903906 470 Acinetobacter baumannii IS-251 strain=IS-251 na latest Contig Major Full 2012-10-09 gacin18v1.0 Walter Reed Army Institute of Research GCA_000304655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/655/GCF_000304655.1_gacin18v1.0/ na na na haploid bacteria 4007286 4007286 39.000000 0 72 72 NCBI RefSeq GCF_000304655.1-RS_2025_04_21 2025-04-21 3933 3773 73 26195261 GCF_000304675.1 PRJNA224116 SAMN00761229 AMFI00000000.1 na 903908 470 Acinetobacter baumannii Naval-72 strain=Naval-72 na latest Contig Major Full 2012-10-09 GACIN20v1.0 Walter Reed Army Institute of Research GCA_000304675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/675/GCF_000304675.1_GACIN20v1.0/ na na na haploid bacteria 3840453 3840453 39.000000 0 52 52 NCBI RefSeq GCF_000304675.1-RS_2025_04_20 2025-04-20 3693 3492 107 26195261 GCF_000304695.1 PRJNA224116 SAMN00761221 AMEI00000000.1 na 903905 470 Acinetobacter baumannii IS-235 strain=IS-235 na latest Contig Major Full 2012-10-09 gacin17v1.0 Walter Reed Army Institute of Research GCA_000304695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/695/GCF_000304695.1_gacin17v1.0/ na na na haploid bacteria 4060387 4060387 39.000000 0 76 76 NCBI RefSeq GCF_000304695.1-RS_2025_04_23 2025-04-23 3999 3827 82 26195261 GCF_000304715.1 PRJNA224116 SAMN02471614 ALXF00000000.1 na 1221537 640331 Fructilactobacillus florum 2F strain=2F na latest Contig Major Full 2012-10-09 2F_v3c University of California, Davis GCA_000304715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/715/GCF_000304715.1_2F_v3c/ na na na haploid bacteria 1261842 1261842 41.500000 0 46 46 NCBI RefSeq GCF_000304715.1-RS_2026_01_27 2026-01-27 1245 1214 25 23405360 GCF_000304755.1 PRJNA224116 SAMN02435814 AJRL00000000.1 na 991924 666 Vibrio cholerae CP1033(6) strain=CP1033(6) na latest Contig Major Full 2012-10-10 ASM30475v1 Institute for Genome Sciences GCA_000304755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/755/GCF_000304755.1_ASM30475v1/ na na na haploid bacteria 3988132 3988132 47.500000 0 33 33 NCBI RefSeq GCF_000304755.1-RS_2026_01_01 2026-01-01 3652 3493 91 26980836 GCF_000304775.1 PRJNA224116 SAMN00249592 AJRO00000000.1 na 991937 666 Vibrio cholerae HC-1A2 strain=HC-1A2 na latest Contig Major Full 2012-10-10 ASM30477v1 Institute for Genome Sciences GCA_000304775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/775/GCF_000304775.1_ASM30477v1/ na na na haploid bacteria 3965428 3965428 48.000000 0 19 19 NCBI RefSeq GCF_000304775.1-RS_2025_02_17 2025-02-17 3660 3463 119 na GCF_000304795.1 PRJNA224116 SAMN00717275 AJRU00000000.1 na 991943 666 Vibrio cholerae HC-61A2 strain=HC-61A2 na latest Contig Major Full 2012-10-10 ASM30479v1 Institute for Genome Sciences GCA_000304795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/795/GCF_000304795.1_ASM30479v1/ na na na haploid bacteria 4000124 4000124 48.000000 0 24 24 NCBI RefSeq GCF_000304795.1-RS_2026_01_11 2026-01-11 3665 3456 122 na GCF_000304815.2 PRJNA224116 SAMN01036685 AMTD00000000.1 na 1005450 562 Escherichia coli 3.4870 strain=3.487 na latest Scaffold Minor Full 2012-11-01 ASM30481v2 Institute for Genome Sciences GCA_000304815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/815/GCF_000304815.2_ASM30481v2/ na na na haploid bacteria 5338164 5336334 50.500000 0 357 426 NCBI RefSeq GCF_000304815.2-RS_2025_02_12 2025-02-12 5574 5077 98 na GCF_000304835.2 PRJNA224116 SAMN01036880 AMTN00000000.1 na 1005463 562 Escherichia coli 8.0416 strain=8.0416 na latest Contig Minor Full 2012-10-10 ASM30483v2 Institute for Genome Sciences GCA_000304835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/835/GCF_000304835.2_ASM30483v2/ na na na haploid bacteria 5394166 5394166 50.500000 0 244 244 NCBI RefSeq GCF_000304835.2-RS_2025_07_10 2025-07-10 5551 5088 102 na GCF_000304855.2 PRJNA224116 SAMN01036883 AMTO00000000.1 na 1005469 562 Escherichia coli 10.0821 strain=10.0821 na latest Contig Minor Full 2012-10-10 ASM30485v2 Institute for Genome Sciences GCA_000304855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/855/GCF_000304855.2_ASM30485v2/ na na na haploid bacteria 5188594 5188594 50.000000 0 107 107 NCBI RefSeq GCF_000304855.2-RS_2025_07_14 2025-07-14 5132 4734 96 na GCF_000304875.2 PRJNA224116 SAMN01036692 AMTE00000000.1 na 1005452 562 Escherichia coli 5.2239 strain=5.2239 na latest Scaffold Minor Full 2012-11-01 ASM30487v2 Institute for Genome Sciences GCA_000304875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/875/GCF_000304875.2_ASM30487v2/ na na na haploid bacteria 5316904 5315820 50.500000 0 413 431 NCBI RefSeq GCF_000304875.2-RS_2025_06_15 2025-06-15 5541 5010 104 na GCF_000304915.2 PRJNA224116 SAMN00736148 AJRM00000000.1 na 991991 666 Vibrio cholerae CP1035(8) strain=CP1035 na latest Scaffold Minor Full 2012-10-31 ASM30491v2 Institute for Genome Sciences GCA_000304915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/915/GCF_000304915.2_ASM30491v2/ na na na haploid bacteria 3933356 3928587 47.500000 0 158 268 NCBI RefSeq GCF_000304915.2-RS_2026_01_10 2026-01-10 3651 3443 77 26980836 GCF_000304935.2 PRJNA224116 SAMN00722973 AJRN00000000.1 na 991951 666 Vibrio cholerae HC-17A1 strain=HC-17A1 na latest Scaffold Minor Full 2012-10-31 ASM30493v2 Institute for Genome Sciences GCA_000304935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/935/GCF_000304935.2_ASM30493v2/ na na na haploid bacteria 4174355 4164612 47.000000 0 405 527 NCBI RefSeq GCF_000304935.2-RS_2025_04_18 2025-04-18 4065 3845 109 na GCF_000304955.2 PRJNA224116 SAMN02435824 AJRP00000000.1 na 1051362 666 Vibrio cholerae HC-41B1 strain=HC-41B1 na latest Scaffold Minor Full 2012-10-31 ASM30495v2 Institute for Genome Sciences GCA_000304955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/955/GCF_000304955.2_ASM30495v2/ na na na haploid bacteria 3883402 3882401 47.500000 0 121 142 NCBI RefSeq GCF_000304955.2-RS_2025_04_18 2025-04-18 3568 3391 93 na GCF_000304995.1 PRJNA224116 SAMN00736140 AJRQ00000000.1 na 991968 666 Vibrio cholerae HC-50A2 strain=HC-50A2 na latest Scaffold Major Full 2012-10-31 ASM30499v1 Institute for Genome Sciences GCA_000304995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/304/995/GCF_000304995.1_ASM30499v1/ na na na haploid bacteria 4030802 4023694 47.500000 0 338 502 NCBI RefSeq GCF_000304995.1-RS_2025_08_20 2025-08-20 3837 3599 77 na GCF_000305015.2 PRJNA224116 SAMN00722972 AJRR00000000.1 na 991972 666 Vibrio cholerae HC-55C2 strain=HC-55C2 na latest Scaffold Minor Full 2012-10-31 ASM30501v2 Institute for Genome Sciences GCA_000305015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/015/GCF_000305015.2_ASM30501v2/ na na na haploid bacteria 3940186 3939156 48.000000 0 125 142 NCBI RefSeq GCF_000305015.2-RS_2026_01_21 2026-01-21 3642 3458 95 na GCF_000305055.2 PRJNA224116 SAMN00727941 AJRT00000000.1 na 992005 666 Vibrio cholerae HC-60A1 strain=HC-60A1 na latest Scaffold Minor Full 2012-10-31 ASM30505v2 Institute for Genome Sciences GCA_000305055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/055/GCF_000305055.2_ASM30505v2/ na na na haploid bacteria 3938002 3937569 48.000000 0 132 139 NCBI RefSeq GCF_000305055.2-RS_2026_01_21 2026-01-21 3629 3462 82 na GCF_000305075.2 PRJNA224116 SAMN00722988 AJRV00000000.1 na 992006 666 Vibrio cholerae HC-62A1 strain=HC-62A1 na latest Scaffold Minor Full 2012-10-31 ASM30507v2 Institute for Genome Sciences GCA_000305075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/075/GCF_000305075.2_ASM30507v2/ na na na haploid bacteria 4032880 4032062 47.500000 0 105 126 NCBI RefSeq GCF_000305075.2-RS_2026_04_30 2026-04-30 3695 3567 81 na GCF_000305095.2 PRJNA224116 SAMN00722981 AJRW00000000.1 na 991987 666 Vibrio cholerae HC-77A1 strain=HC-77A1 na latest Scaffold Minor Full 2012-10-31 ASM30509v2 Institute for Genome Sciences GCA_000305095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/095/GCF_000305095.2_ASM30509v2/ na na na haploid bacteria 4040127 4039343 47.500000 0 112 134 NCBI RefSeq GCF_000305095.2-RS_2026_04_29 2026-04-29 3702 3567 91 na GCF_000305115.2 PRJNA224116 SAMN00722741 AJRX00000000.1 na 992000 666 Vibrio cholerae HE-40 strain=HE-40 na latest Scaffold Minor Full 2012-10-31 ASM30511v2 Institute for Genome Sciences GCA_000305115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/115/GCF_000305115.2_ASM30511v2/ na na na haploid bacteria 3875898 3874956 47.500000 0 102 122 NCBI RefSeq GCF_000305115.2-RS_2025_04_18 2025-04-18 3555 3381 94 na GCF_000305135.2 PRJNA224116 SAMN00722963 AJRY00000000.1 na 992001 666 Vibrio cholerae HE-46 strain=HE-46 na latest Scaffold Minor Full 2012-10-31 ASM30513v2 Institute for Genome Sciences GCA_000305135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/135/GCF_000305135.2_ASM30513v2/ na na na haploid bacteria 3874516 3873673 47.500000 0 100 120 NCBI RefSeq GCF_000305135.2-RS_2025_04_18 2025-04-18 3553 3385 92 na GCF_000305155.2 PRJNA224116 SAMN01036878 AMTF00000000.1 na 1005455 562 Escherichia coli 6.0172 strain=6.0172 na latest Scaffold Minor Full 2012-11-01 ASM30515v2 Institute for Genome Sciences GCA_000305155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/155/GCF_000305155.2_ASM30515v2/ na na na haploid bacteria 5339823 5337661 50.500000 0 379 431 NCBI RefSeq GCF_000305155.2-RS_2025_06_17 2025-06-17 5588 5094 93 na GCF_000305175.1 PRJNA224116 SAMN01036886 AMTG00000000.1 na 1005462 562 Escherichia coli 8.0566 strain=8.0566 na latest Scaffold Major Full 2012-11-01 ASM30517v1 Institute for Genome Sciences GCA_000305175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/175/GCF_000305175.1_ASM30517v1/ na na na haploid bacteria 4725170 4723300 51.000000 0 124 157 NCBI RefSeq GCF_000305175.1-RS_2025_08_11 2025-08-11 4738 4449 87 na GCF_000305195.2 PRJNA224116 SAMN00715107 AJRS00000000.1 na 991977 666 Vibrio cholerae HC-59A1 strain=HC-59A1 na latest Scaffold Minor Full 2012-10-31 ASM30519v2 Institute for Genome Sciences GCA_000305195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/195/GCF_000305195.2_ASM30519v2/ na na na haploid bacteria 3934654 3933129 48.000000 0 114 160 NCBI RefSeq GCF_000305195.2-RS_2026_01_21 2026-01-21 3628 3461 80 na GCF_000305215.1 PRJNA224116 SAMN00761203 AMDE00000000.1 na 903901 470 Acinetobacter baumannii OIFC074 strain=OIFC074 na latest Contig Major Full 2012-10-11 gacin13v1.0 Walter Reed Army Institute of Research GCA_000305215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/215/GCF_000305215.1_gacin13v1.0/ na na na haploid bacteria 3935888 3935888 39.000000 0 66 66 NCBI RefSeq GCF_000305215.1-RS_2025_04_23 2025-04-23 3863 3654 85 26195261 GCF_000305235.1 PRJNA224116 SAMN00761228 AMDF00000000.1 na 903902 470 Acinetobacter baumannii OIFC098 strain=OIFC098 na latest Contig Major Full 2012-10-11 gacin14v1.0 Walter Reed Army Institute of Research GCA_000305235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/235/GCF_000305235.1_gacin14v1.0/ na na na haploid bacteria 3812112 3812112 39.000000 0 72 72 NCBI RefSeq GCF_000305235.1-RS_2025_04_25 2025-04-25 3708 3494 80 26195261 GCF_000305255.1 PRJNA224116 SAMN00761237 AMDQ00000000.1 na 903903 470 Acinetobacter baumannii OIFC180 strain=OIFC180 na latest Contig Major Full 2012-10-11 gacin15v1.0 Walter Reed Army Institute of Research GCA_000305255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/255/GCF_000305255.1_gacin15v1.0/ na na na haploid bacteria 3986823 3986823 39.000000 0 141 141 NCBI RefSeq GCF_000305255.1-RS_2025_04_23 2025-04-23 3963 3740 84 26195261 GCF_000305275.1 PRJNA224116 SAMN00761230 AMFL00000000.1 na 903910 470 Acinetobacter baumannii OIFC110 strain=OIFC110 na latest Contig Major Full 2012-10-11 gacin22v1.0 Walter Reed Army Institute of Research GCA_000305275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/275/GCF_000305275.1_gacin22v1.0/ na na na haploid bacteria 3981666 3981666 39.000000 0 53 53 NCBI RefSeq GCF_000305275.1-RS_2025_04_15 2025-04-15 3894 3729 90 26195261 GCF_000305295.1 PRJNA224116 SAMN00761220 AMDR00000000.1 na 903904 470 Acinetobacter baumannii Naval-13 strain=Naval-13 na latest Contig Major Full 2012-10-11 gacin16v1.0 Walter Reed Army Institute of Research GCA_000305295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/295/GCF_000305295.1_gacin16v1.0/ na na na haploid bacteria 4107737 4107737 39.000000 0 64 64 NCBI RefSeq GCF_000305295.1-RS_2025_04_23 2025-04-23 4004 3785 105 26195261 GCF_000305315.1 PRJNA224116 SAMN00761238 AMFK00000000.1 na 903909 470 Acinetobacter baumannii Naval-83 strain=Naval-83 na latest Contig Major Full 2012-10-11 gacin21v1.0 Walter Reed Army Institute of Research GCA_000305315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/315/GCF_000305315.1_gacin21v1.0/ na na na haploid bacteria 4106603 4106603 39.000000 0 103 103 NCBI RefSeq GCF_000305315.1-RS_2025_04_24 2025-04-24 4057 3802 115 26195261 GCF_000305335.2 PRJNA224116 SAMN02603111 na na 1046629 1304 Streptococcus salivarius 57.I strain=57.I na latest Complete Genome Major Full 2011-07-05 ASM30533v2 Chang Gung University GCA_000305335.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/335/GCF_000305335.2_ASM30533v2/ na na na haploid bacteria 2138805 2138805 40.000000 1 1 1 NCBI RefSeq GCF_000305335.2-RS_2025_07_07 2025-07-07 2029 1889 90 21914897 GCF_000305355.1 PRJNA224116 SAMN01036879 AMTH00000000.1 na 1005464 562 Escherichia coli 8.0569 strain=8.0569 na latest Scaffold Major Full 2012-11-01 ASM30535v1 Institute for Genome Sciences GCA_000305355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/355/GCF_000305355.1_ASM30535v1/ na na na haploid bacteria 4729351 4727785 51.000000 0 116 143 NCBI RefSeq GCF_000305355.1-RS_2025_08_12 2025-08-12 4737 4439 91 na GCF_000305375.2 PRJNA224116 SAMN01036881 AMTI00000000.1 na 1005461 562 Escherichia coli 8.0586 strain=8.0586 na latest Scaffold Minor Full 2012-11-01 ASM30537v2 Institute for Genome Sciences GCA_000305375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/375/GCF_000305375.2_ASM30537v2/ na na na haploid bacteria 5420472 5417768 50.500000 0 483 537 NCBI RefSeq GCF_000305375.2-RS_2025_06_17 2025-06-17 5754 5239 95 na GCF_000305395.2 PRJNA224116 SAMN01036882 AMTJ00000000.1 na 1005460 562 Escherichia coli 8.2524 strain=8.2524 na latest Scaffold Minor Full 2012-11-01 ASM30539v2 Institute for Genome Sciences GCA_000305395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/395/GCF_000305395.2_ASM30539v2/ na na na haploid bacteria 5429028 5424926 50.500000 0 358 436 NCBI RefSeq GCF_000305395.2-RS_2025_06_17 2025-06-17 5697 5200 96 na GCF_000305415.2 PRJNA224116 SAMN01036885 AMTK00000000.1 na 1005466 562 Escherichia coli 10.0833 strain=10.0833 na latest Scaffold Minor Full 2012-11-01 ASM30541v2 Institute for Genome Sciences GCA_000305415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/415/GCF_000305415.2_ASM30541v2/ na na na haploid bacteria 5373953 5370972 50.500000 0 415 487 NCBI RefSeq GCF_000305415.2-RS_2025_06_16 2025-06-16 5709 5181 103 na GCF_000305435.2 PRJNA224116 SAMN01036887 AMTL00000000.1 na 1005467 562 Escherichia coli 10.0869 strain=10.0869 na latest Scaffold Minor Full 2012-11-01 ASM30543v2 Institute for Genome Sciences GCA_000305435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/435/GCF_000305435.2_ASM30543v2/ na na na haploid bacteria 5293905 5292009 50.500000 0 384 418 NCBI RefSeq GCF_000305435.2-RS_2025_06_15 2025-06-15 5530 4991 98 na GCF_000305455.2 PRJNA224116 SAMN01036884 AMTM00000000.1 na 1005397 562 Escherichia coli 88.0221 strain=88.0221 na latest Scaffold Minor Full 2012-11-01 ASM30545v2 Institute for Genome Sciences GCA_000305455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/455/GCF_000305455.2_ASM30545v2/ na na na haploid bacteria 5125879 5122402 50.500000 0 363 421 NCBI RefSeq GCF_000305455.2-RS_2025_06_17 2025-06-17 5367 4919 96 na GCF_000305495.1 PRJNA224116 SAMN00857837 AJTN00000000.2 na 1174504 1407 Peribacillus psychrosaccharolyticus ATCC 23296 strain=ATCC 23296 na latest Contig Major Full 2013-04-15 BacPsy2.0 Complutense University GCA_000305495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/495/GCF_000305495.1_BacPsy2.0/ na assembly from type material na haploid bacteria 4590454 4590454 39.000000 0 265 265 NCBI RefSeq GCF_000305495.1-RS_2026_01_27 2026-01-27 4797 4438 100 23723405 GCF_000305525.2 PRJNA224116 SAMN00752544 AJSH00000000.1 na 991949 666 Vibrio cholerae HC-02C1 strain=HC-02C1 na latest Scaffold Minor Full 2012-10-16 ASM30552v2 Institute for Genome Sciences GCA_000305525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/525/GCF_000305525.2_ASM30552v2/ na na na haploid bacteria 3935576 3934012 48.000000 0 121 154 NCBI RefSeq GCF_000305525.2-RS_2026_01_21 2026-01-21 3628 3458 81 na GCF_000305545.2 PRJNA224116 SAMN00752545 AJSN00000000.1 na 991978 666 Vibrio cholerae HC-59B1 strain=HC-59B1 na latest Scaffold Minor Full 2012-10-16 ASM30554v2 Institute for Genome Sciences GCA_000305545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/545/GCF_000305545.2_ASM30554v2/ na na na haploid bacteria 3934504 3933331 48.000000 0 107 143 NCBI RefSeq GCF_000305545.2-RS_2026_01_21 2026-01-21 3617 3459 77 na GCF_000305565.2 PRJNA224116 SAMN00752542 AJSK00000000.1 na 992002 666 Vibrio cholerae HC-44C1 strain=HC-44C1 na latest Scaffold Minor Full 2012-10-16 ASM30556v2 Institute for Genome Sciences GCA_000305565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/565/GCF_000305565.2_ASM30556v2/ na na na haploid bacteria 3876537 3874874 47.500000 0 90 135 NCBI RefSeq GCF_000305565.2-RS_2025_04_18 2025-04-18 3539 3383 79 na GCF_000305585.2 PRJNA224116 SAMN00752441 AJSJ00000000.1 na 991958 666 Vibrio cholerae HC-37A1 strain=HC-37A1 na latest Scaffold Minor Full 2012-10-16 ASM30558v2 Institute for Genome Sciences GCA_000305585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/585/GCF_000305585.2_ASM30558v2/ na na na haploid bacteria 4029550 4027883 47.500000 0 97 136 NCBI RefSeq GCF_000305585.2-RS_2026_04_30 2026-04-30 3682 3559 76 na GCF_000305605.1 PRJNA224116 SAMN00752440 AJSL00000000.1 na 991941 666 Vibrio cholerae HC-46B1 strain=HC-46B1 na latest Contig Major Full 2012-10-15 ASM30560v1 Institute for Genome Sciences GCA_000305605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/605/GCF_000305605.1_ASM30560v1/ na na na haploid bacteria 3941918 3941918 47.500000 0 24 24 NCBI RefSeq GCF_000305605.1-RS_2025_02_17 2025-02-17 3601 3390 131 na GCF_000305625.2 PRJNA224116 SAMN00752541 AJSO00000000.1 na 992007 666 Vibrio cholerae HC-62B1 strain=HC-62B1 na latest Scaffold Minor Full 2012-10-16 ASM30562v2 Institute for Genome Sciences GCA_000305625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/625/GCF_000305625.2_ASM30562v2/ na na na haploid bacteria 4028528 4025561 47.500000 0 71 123 NCBI RefSeq GCF_000305625.2-RS_2026_05_31 2026-05-31 3699 3558 88 na GCF_000305645.2 PRJNA224116 SAMN00760470 AJSM00000000.1 na 991971 666 Vibrio cholerae HC-55B2 strain=HC-55B2 na latest Scaffold Minor Full 2012-10-16 ASM30564v2 Institute for Genome Sciences GCA_000305645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/645/GCF_000305645.2_ASM30564v2/ na na na haploid bacteria 3934012 3932379 48.000000 0 109 147 NCBI RefSeq GCF_000305645.2-RS_2026_01_21 2026-01-21 3615 3456 74 na GCF_000305675.2 PRJNA224116 SAMN00752543 AJSI00000000.1 na 1000952 666 Vibrio cholerae HC-17A2 strain=HC-17A2 na latest Scaffold Minor Full 2012-10-16 ASM30567v2 Institute for Genome Sciences GCA_000305675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/675/GCF_000305675.2_ASM30567v2/ na na na haploid bacteria 4023476 4021655 47.500000 0 94 135 NCBI RefSeq GCF_000305675.2-RS_2026_04_27 2026-04-27 3681 3556 79 na GCF_000305695.2 PRJNA224116 SAMN00752540 AJSP00000000.1 na 992008 666 Vibrio cholerae HC-69A1 strain=HC-69A1 na latest Scaffold Minor Full 2012-10-16 ASM30569v2 Institute for Genome Sciences GCA_000305695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/695/GCF_000305695.2_ASM30569v2/ na na na haploid bacteria 4024183 4022758 47.500000 0 93 124 NCBI RefSeq GCF_000305695.2-RS_2026_04_30 2026-04-30 3679 3554 79 na GCF_000305755.2 PRJNA224116 SAMN00752549 AJSS00000000.1 na 992012 992012 Vibrio sp. HENC-03 strain=HENC-03 na latest Scaffold Minor Full 2012-10-16 ASM30575v2 Institute for Genome Sciences GCA_000305755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/755/GCF_000305755.2_ASM30575v2/ na na na haploid bacteria 5907191 5905459 45.500000 0 87 125 NCBI RefSeq GCF_000305755.2-RS_2025_08_25 2025-08-25 5283 5150 99 na GCF_000305775.1 PRJNA224116 SAMN02604247 na na 1147129 1147129 Dehalobacter sp. DCA strain=DCA na latest Complete Genome Major Full 2012-10-16 ASM30577v1 University of Toronto GCA_000305775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/775/GCF_000305775.1_ASM30577v1/ na na na haploid bacteria 3069953 3069953 44.500000 1 1 1 NCBI RefSeq GCF_000305775.1-RS_2024_05_07 2024-05-07 2979 2873 65 23284863 GCF_000305785.2 PRJNA224116 SAMN02603035 na na 1117647 447471 Simiduia agarivorans SA1 = DSM 21679 strain=SA1 = DSM 21679 na latest Complete Genome Major Full 2013-05-31 ASM30578v2 Biodiversity Research Center, Academia Sinica, GCA_000305785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/785/GCF_000305785.2_ASM30578v2/ na assembly from type material na haploid bacteria 4300227 4300227 56.000000 1 1 1 NCBI RefSeq GCF_000305785.2-RS_2026_03_30 2026-03-30 3881 3808 54 23405302 GCF_000305815.1 PRJNA224116 SAMN01141377 na na 1131462 1131462 Dehalobacter sp. CF strain=CF na latest Complete Genome Major Full 2012-10-16 ASM30581v1 University of Toronto GCA_000305815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/815/GCF_000305815.1_ASM30581v1/ na na na haploid bacteria 3092048 3092048 44.500000 1 1 1 NCBI RefSeq GCF_000305815.1-RS_2024_05_06 2024-05-06 2989 2897 65 23284863 GCF_000305835.1 PRJNA224116 SAMN02469756 AMPY00000000.1 na 1210518 263 Francisella tularensis subsp. tularensis 70102010 strain=70102010 na latest Contig Major Full 2012-10-16 ASM30583v1 Dugway Proving Ground GCA_000305835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/835/GCF_000305835.1_ASM30583v1/ na na na haploid bacteria 1817020 1817020 32.500000 0 28 28 NCBI RefSeq GCF_000305835.1-RS_2026_01_30 2026-01-30 1907 1671 42 na GCF_000305855.1 PRJNA224116 SAMN02469755 AMPX00000000.1 na 1210519 263 Francisella tularensis subsp. tularensis 80700103 strain=80700103 na latest Contig Major Full 2012-10-16 ASM30585v1 Dugway Proving Ground GCA_000305855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/855/GCF_000305855.1_ASM30585v1/ na na na haploid bacteria 1810842 1810842 32.500000 0 58 58 NCBI RefSeq GCF_000305855.1-RS_2026_01_30 2026-01-30 1928 1634 41 na GCF_000305875.1 PRJNA224116 SAMN02469757 AMPW00000000.1 na 1210520 263 Francisella tularensis subsp. tularensis 80700075 strain=80700075 na latest Contig Major Full 2012-10-16 ASM30587v1 Dugway Proving Ground GCA_000305875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/875/GCF_000305875.1_ASM30587v1/ na na na haploid bacteria 1808663 1808663 32.500000 0 58 58 NCBI RefSeq GCF_000305875.1-RS_2026_01_30 2026-01-30 1939 1628 41 na GCF_000305895.1 PRJNA224116 SAMN02469748 AMPV00000000.1 na 1210521 263 Francisella tularensis subsp. tularensis 831 strain=831 na latest Contig Major Full 2012-10-16 ASM30589v1 Dugway Proving Ground GCA_000305895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/895/GCF_000305895.1_ASM30589v1/ na na na haploid bacteria 1813087 1813087 32.500000 0 46 46 NCBI RefSeq GCF_000305895.1-RS_2026_01_30 2026-01-30 1920 1670 42 na GCF_000305915.1 PRJNA224116 SAMN02469754 AMPU00000000.1 na 1210522 263 Francisella tularensis subsp. tularensis AS_713 strain=AS_713 na latest Contig Major Full 2012-10-16 ASM30591v1 Dugway Proving Ground GCA_000305915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/915/GCF_000305915.1_ASM30591v1/ na na na haploid bacteria 1815494 1815494 32.500000 0 46 46 NCBI RefSeq GCF_000305915.1-RS_2026_02_17 2026-02-17 1919 1652 43 na GCF_000305935.1 PRJNA224116 SAMN02603274 na reference genome 1089553 85874 Thermacetogenium phaeum DSM 12270 strain=DSM 12270 na latest Complete Genome Major Full 2012-10-17 ASM30593v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000305935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/935/GCF_000305935.1_ASM30593v1/ na assembly from type material na haploid bacteria 2939057 2939057 54.000000 1 1 1 NCBI RefSeq GCF_000305935.1-RS_2025_12_11 2025-12-11 2926 2804 63 23259483 GCF_000305995.1 PRJNA224116 SAMN02471886 AMFE00000000.1 na 1229518 1363 Lactococcus garvieae Tac2 strain=Tac2 na latest Contig Major Full 2012-10-17 LgarvTac2 1.0 Department of Food, Environmental and Nutritional Sciences, University of Milano GCA_000305995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/305/995/GCF_000305995.1_LgarvTac2_1.0/ na na na haploid bacteria 2242863 2242863 38.000000 0 97 97 NCBI RefSeq GCF_000305995.1-RS_2026_04_05 2026-04-05 2240 2139 52 23405320 GCF_000306035.1 PRJNA224116 SAMN02469423 AMPS00000000.1 na 1214225 1214225 Acidocella sp. MX-AZ02 strain=MX-AZ02 na latest Scaffold Major Full 2013-02-23 ASM30603v1 Center for Genomic Sciences GCA_000306035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/035/GCF_000306035.1_ASM30603v1/ na na na haploid bacteria 3624857 3600757 64.000000 0 84 325 NCBI RefSeq GCF_000306035.1-RS_2024_08_22 2024-08-22 3663 3506 52 23405365 GCF_000306055.1 PRJNA224116 SAMN02469596 AJTL00000000.1 na 1169848 56448 Xanthomonas arboricola pv. juglandis str. NCPPB 1447 strain=NCPPB 1447 na latest Contig Major Full 2012-10-17 ASM30605v1 Chungbuk National University GCA_000306055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/055/GCF_000306055.1_ASM30605v1/ na na na haploid bacteria 5021682 5021682 65.500000 0 371 371 NCBI RefSeq GCF_000306055.1-RS_2026_05_16 2026-05-16 4510 4182 98 na GCF_000306075.1 PRJNA224116 SAMN02436576 AKXG00000000.2 na 1193018 173 Leptospira interrogans serovar Grippotyphosa str. Andaman strain=Andaman na latest Contig Major Full 2012-10-24 gls454009v2.0 J. Craig Venter Institute GCA_000306075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/075/GCF_000306075.1_gls454009v2.0/ na na na haploid bacteria 4937420 4937420 35.000000 0 80 80 NCBI RefSeq GCF_000306075.1-RS_2026_02_15 2026-02-15 4199 3924 42 na GCF_000306115.2 PRJNA224116 SAMN02436578 AKWX00000000.2 na 1193069 409998 Leptospira wolffii serovar Khorat str. Khorat-H2 strain=Khorat-H2 na latest Contig Major Full 2013-06-21 gls454061v02 J. Craig Venter Institute GCA_000306115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/115/GCF_000306115.2_gls454061v02/ na assembly from type material na haploid bacteria 4400835 4400835 45.500000 0 23 23 NCBI RefSeq GCF_000306115.2-RS_2026_02_14 2026-02-14 4075 3975 46 na GCF_000306135.1 PRJNA224116 SAMN02436487 AKWU00000000.2 na 1193014 173 Leptospira interrogans serovar Canicola str. Fiocruz LV133 strain=Fiocruz LV133 na latest Contig Major Full 2012-10-24 gls454069v2.0 J. Craig Venter Institute GCA_000306135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/135/GCF_000306135.1_gls454069v2.0/ na na na haploid bacteria 4719846 4719846 35.000000 0 89 89 NCBI RefSeq GCF_000306135.1-RS_2026_02_15 2026-02-15 3935 3663 43 na GCF_000306175.1 PRJNA224116 SAMN02436489 AKXD00000000.2 na 1193049 29507 Leptospira kirschneri str. 2008720114 strain=2008720114 na latest Contig Major Full 2012-10-31 gls454018v2.0 J. Craig Venter Institute GCA_000306175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/175/GCF_000306175.1_gls454018v2.0/ na na na haploid bacteria 4391771 4391771 36.000000 0 51 51 NCBI RefSeq GCF_000306175.1-RS_2026_02_17 2026-02-17 3669 3411 45 na GCF_000306195.1 PRJNA224116 SAMN02436392 AKXB00000000.2 na 1193053 28182 Leptospira noguchii str. 2001034031 strain=2001034031 na latest Contig Major Full 2013-03-16 gls454024v02 J. Craig Venter Institute GCA_000306195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/195/GCF_000306195.1_gls454024v02/ na na na haploid bacteria 4938803 4938803 35.500000 0 175 175 NCBI RefSeq GCF_000306195.1-RS_2026_02_15 2026-02-15 4531 3984 42 na GCF_000306215.1 PRJNA224116 SAMN02436488 AKXA00000000.2 na 1193039 173 Leptospira interrogans str. Brem 329 strain=Brem 329 na latest Contig Major Full 2012-10-31 gls454057v2.0 J. Craig Venter Institute GCA_000306215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/215/GCF_000306215.1_gls454057v2.0/ na na na haploid bacteria 4754898 4754898 35.000000 0 53 53 NCBI RefSeq GCF_000306215.1-RS_2026_02_17 2026-02-17 4016 3745 45 na GCF_000306235.2 PRJNA224116 SAMN02436574 AKWZ00000000.2 reference genome 1193011 48782 Leptospira fainei serovar Hurstbridge str. BUT 6 strain=BUT 6 na latest Contig Major Full 2013-06-21 gls454058v2.0 J. Craig Venter Institute GCA_000306235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/235/GCF_000306235.2_gls454058v2.0/ na assembly from type material na haploid bacteria 4287324 4287324 43.500000 0 13 13 NCBI RefSeq GCF_000306235.2-RS_2025_12_13 2025-12-13 3867 3795 46 na GCF_000306255.2 PRJNA224116 SAMN02436411 AKWY00000000.2 reference genome 1001595 28182 Leptospira noguchii serovar Panama str. CZ214 strain=CZ214 na latest Contig Major Full 2013-08-07 gls454059v02 J. Craig Venter Institute GCA_000306255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/255/GCF_000306255.2_gls454059v02/ na assembly from type material na haploid bacteria 4710917 4710917 35.500000 0 35 35 NCBI RefSeq GCF_000306255.2-RS_2026_03_21 2026-03-21 4063 3802 44 na GCF_000306295.1 PRJNA224116 SAMN02436410 AKWP00000000.2 na 1193019 173 Leptospira interrogans serovar Icterohaemorrhagiae str. Verdun LP strain=Verdun LP na latest Contig Major Full 2012-10-31 gls454117v2.0 J. Craig Venter Institute GCA_000306295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/295/GCF_000306295.1_gls454117v2.0/ na na na haploid bacteria 4609830 4609830 35.000000 0 31 31 NCBI RefSeq GCF_000306295.1-RS_2026_02_15 2026-02-15 3801 3625 42 na GCF_000306335.1 PRJNA224116 SAMN02436388 AKWM00000000.2 na 1193010 1137606 Leptospira mayottensis 200901122 strain=200901122 na latest Contig Major Full 2012-11-05 gls454125v02 J. Craig Venter Institute GCA_000306335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/335/GCF_000306335.1_gls454125v02/ na na na haploid bacteria 4161553 4161553 39.500000 0 85 85 NCBI RefSeq GCF_000306335.1-RS_2026_03_31 2026-03-31 3792 3437 43 25249563 GCF_000306375.1 PRJNA224116 SAMN02436387 AKWJ00000000.2 na 1193009 174 Leptospira borgpetersenii str. 200801926 strain=200801926 na latest Contig Major Full 2012-10-31 gls454128v2.0 J. Craig Venter Institute GCA_000306375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/375/GCF_000306375.1_gls454128v2.0/ na na na haploid bacteria 3974386 3974386 40.000000 0 39 39 NCBI RefSeq GCF_000306375.1-RS_2026_01_30 2026-01-30 3571 3294 44 na GCF_000306395.1 PRJNA224116 SAMN02436493 AKWH00000000.2 na 1193047 29507 Leptospira kirschneri str. 200802841 strain=200802841 na latest Contig Major Full 2012-10-24 gls454131v2.0 J. Craig Venter Institute GCA_000306395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/395/GCF_000306395.1_gls454131v2.0/ na na na haploid bacteria 4691430 4691430 36.000000 0 91 91 NCBI RefSeq GCF_000306395.1-RS_2026_02_17 2026-02-17 4074 3783 45 na GCF_000306435.1 PRJNA224116 SAMN02436391 AKWV00000000.2 na 1193012 1193012 Leptospira sp. Fiocruz LV3954 strain=Fiocruz LV3954 na latest Contig Major Full 2012-10-24 gls454068v2.0 J. Craig Venter Institute GCA_000306435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/435/GCF_000306435.1_gls454068v2.0/ na na na haploid bacteria 4038391 4038391 41.500000 0 91 91 NCBI RefSeq GCF_000306435.1-RS_2024_08_13 2024-08-13 3784 3528 43 na GCF_000306455.1 PRJNA224116 SAMN02436390 AKWT00000000.2 na 1193056 28183 Leptospira santarosai str. AIM strain=AIM na latest Contig Major Full 2013-03-16 gls454070v02 J. Craig Venter Institute GCA_000306455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/455/GCF_000306455.1_gls454070v02/ na na na haploid bacteria 4071195 4071195 41.500000 0 72 72 NCBI RefSeq GCF_000306455.1-RS_2026_01_30 2026-01-30 3763 3518 43 na GCF_000306475.1 PRJNA224116 SAMN02436486 AKWS00000000.2 na 1193057 28183 Leptospira santarosai str. JET strain=JET na latest Contig Major Full 2012-11-05 gls454071v02 J. Craig Venter Institute GCA_000306475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/475/GCF_000306475.1_gls454071v02/ na na na haploid bacteria 4128169 4128169 41.500000 0 82 82 NCBI RefSeq GCF_000306475.1-RS_2026_01_15 2026-01-15 3869 3627 44 na GCF_000306515.1 PRJNA224116 SAMN02436389 AKWQ00000000.2 na 1193050 29507 Leptospira kirschneri str. H2 strain=H2 na latest Contig Major Full 2012-10-24 gls454082v2.0 J. Craig Venter Institute GCA_000306515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/515/GCF_000306515.1_gls454082v2.0/ na na na haploid bacteria 4686300 4686300 36.500000 0 80 80 NCBI RefSeq GCF_000306515.1-RS_2025_07_06 2025-07-06 4087 3660 44 na GCF_000306555.1 PRJNA224116 SAMN02436494 AKWL00000000.2 na 1193045 29507 Leptospira kirschneri str. 200801774 strain=200801774 na latest Contig Major Full 2013-03-16 gls454126v02 J. Craig Venter Institute GCA_000306555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/555/GCF_000306555.1_gls454126v02/ na na na haploid bacteria 4643998 4643998 36.000000 0 54 54 NCBI RefSeq GCF_000306555.1-RS_2026_02_15 2026-02-15 3971 3716 44 na GCF_000306575.1 PRJNA224116 SAMN02436577 AKWI00000000.2 na 1193058 28183 Leptospira santarosai str. 200403458 strain=200403458 na latest Contig Major Full 2013-03-16 gls454130v02 J. Craig Venter Institute GCA_000306575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/575/GCF_000306575.1_gls454130v02/ na na na haploid bacteria 4001694 4001694 42.000000 0 44 44 NCBI RefSeq GCF_000306575.1-RS_2026_01_30 2026-01-30 3737 3520 39 na GCF_000306595.1 PRJNA224116 SAMN02436492 AKWG00000000.2 na 1193048 29507 Leptospira kirschneri str. 200803703 strain=200803703 na latest Contig Major Full 2013-03-16 Lkirs200803703v0.2 J. Craig Venter Institute GCA_000306595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/595/GCF_000306595.1_Lkirs200803703v0.2/ na na na haploid bacteria 4703609 4703609 36.000000 0 87 87 NCBI RefSeq GCF_000306595.1-RS_2026_02_15 2026-02-15 4051 3756 43 na GCF_000306655.1 PRJNA224116 SAMN02436413 AKWC00000000.2 na 1193060 173 Leptospira interrogans str. HAI1594 strain=HAI1594 na latest Contig Major Full 2012-10-31 gls454173v2.0 J. Craig Venter Institute GCA_000306655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/655/GCF_000306655.1_gls454173v2.0/ na na na haploid bacteria 4608233 4608233 35.000000 0 41 41 NCBI RefSeq GCF_000306655.1-RS_2026_02_17 2026-02-17 3797 3631 43 na GCF_000306675.2 PRJNA224116 SAMN02436412 na reference genome 1192864 1137606 Leptospira mayottensis 200901116 strain=200901116 na latest Complete Genome Major Full 2018-12-21 ASM30667v3 J. Craig Venter Institute GCA_000306675.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/675/GCF_000306675.2_ASM30667v3/ na assembly from type material na haploid bacteria 4216282 4216282 39.500000 3 3 3 NCBI RefSeq GCF_000306675.2-RS_2026_03_31 2026-03-31 3688 3399 44 30082683 GCF_000306745.1 PRJNA224116 SAMN02603279 na na 527021 1428 Bacillus thuringiensis Bt407 strain=407 na latest Complete Genome Major Full 2012-10-18 ASM30674v1 Georg-August-University Goettingen, Genomic and Applied Microbiology; Goettingen Genomics Laboratory GCA_000306745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/745/GCF_000306745.1_ASM30674v1/ na na na haploid bacteria 6134344 6134344 35.000000 10 10 10 NCBI RefSeq GCF_000306745.1-RS_2025_12_13 2025-12-13 6607 6237 189 23405326 GCF_000306765.2 PRJNA224116 SAMN02603397 na na 523841 2252 Haloferax mediterranei ATCC 33500 strain=CGMCC 1.2087 na latest Complete Genome Major Full 2014-05-27 ASM30676v2 Institute of Microbiology, Chinese Academy of Sciences GCA_000306765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/765/GCF_000306765.2_ASM30676v2/ na assembly from type material na haploid archaea 3904707 3904707 60.500000 4 4 4 NCBI RefSeq GCF_000306765.2-RS_2025_12_02 2025-12-02 3948 3815 65 22247127;22843593 GCF_000306785.1 PRJNA224116 SAMEA2272685 na reference genome 2732864 2732864 Modestobacter italicus strain=BC 501 na latest Complete Genome Major Full 2012-05-24 ASM30678v1 CEA-IG Genoscope GCA_000306785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/785/GCF_000306785.1_ASM30678v1/ na assembly from type material na haploid bacteria 5575517 5575517 74.000000 1 1 1 NCBI RefSeq GCF_000306785.1-RS_2026_05_26 2026-05-26 5397 5282 62 22887672 GCF_000306805.1 PRJNA224116 SAMD00060960 na na 591365 1338 Streptococcus intermedius JTH08 strain=JTH08 na latest Complete Genome Major Full 2012-06-16 ASM30680v1 Juntendo University School of Medicine GCA_000306805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/805/GCF_000306805.1_ASM30680v1/ na na na haploid bacteria 1933610 1933610 37.500000 1 1 1 NCBI RefSeq GCF_000306805.1-RS_2026_02_10 2026-02-10 1929 1778 82 na GCF_000306825.1 PRJNA224116 SAMD00012381 na na 996634 65058 Corynebacterium ulcerans 0102 strain=0102 na latest Complete Genome Major Full 2012-07-02 ASM30682v1 National Institute of Infectious Diseases GCA_000306825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/825/GCF_000306825.1_ASM30682v1/ na na na haploid bacteria 2579188 2579188 53.500000 1 1 1 NCBI RefSeq GCF_000306825.1-RS_2026_02_16 2026-02-16 2362 2268 65 22583953 GCF_000306885.1 PRJNA224116 SAMEA2272360 na reference genome 100901 100901 Wolbachia endosymbiont of Onchocerca ochengi strain=wOo na latest Complete Genome Major Full 2012-07-30 ASM30688v1 University of Liverpool GCA_000306885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/885/GCF_000306885.1_ASM30688v1/ na na na haploid bacteria 957990 957990 32.000000 1 1 1 NCBI RefSeq GCF_000306885.1-RS_2026_01_08 2026-01-08 751 686 41 22919073 GCF_000306905.1 PRJNA224116 SAMEA2272785 na na 879089 1639 Listeria monocytogenes SLCC2540 strain=SLCC2540 na latest Complete Genome Major Full 2012-09-10 ASM30690v1 ERA-NET / Spatelis GCA_000306905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/905/GCF_000306905.1_ASM30690v1/ na na na haploid bacteria 2976958 2976958 38.000000 1 1 1 NCBI RefSeq GCF_000306905.1-RS_2025_03_15 2025-03-15 2966 2856 89 23339658 GCF_000306925.1 PRJNA224116 SAMN02436575 AKXC00000000.2 na 1193017 173 Leptospira interrogans serovar Grippotyphosa str. 2006006986 strain=2006006986 na latest Contig Major Full 2012-10-31 gls454020v2.0 J. Craig Venter Institute GCA_000306925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/925/GCF_000306925.1_gls454020v2.0/ na na na haploid bacteria 4935986 4935986 35.000000 0 60 60 NCBI RefSeq GCF_000306925.1-RS_2026_02_15 2026-02-15 4159 3908 42 na GCF_000306945.1 PRJNA224116 SAMEA2272749 na na 568706 520 Bordetella pertussis 18323 strain=18323 na latest Complete Genome Major Full 2012-08-20 ASM30694v1 WTSI GCA_000306945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/945/GCF_000306945.1_ASM30694v1/ na assembly from type material na haploid bacteria 4043846 4043846 67.500000 1 1 1 NCBI RefSeq GCF_000306945.1-RS_2026_02_10 2026-02-10 3906 3563 64 23051057 GCF_000306965.1 PRJNA224116 SAMN02472174 AMWI00000000.1 reference genome 562743 1216008 Amphibacillus jilinensis Y1 strain=Y1 na latest Scaffold Major Full 2012-10-19 ASM30696v1 Zhejiang University GCA_000306965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/965/GCF_000306965.1_ASM30696v1/ na assembly from type material na haploid bacteria 3836603 3831075 37.500000 0 30 83 NCBI RefSeq GCF_000306965.1-RS_2026_03_31 2026-03-31 3658 3532 61 19965990 GCF_000306985.1 PRJNA224116 SAMEA2272571 na na 879090 1639 Listeria monocytogenes SLCC7179 strain=SLCC7179 na latest Complete Genome Major Full 2012-09-10 ASM30698v1 ERA-NET / Spatelis GCA_000306985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/306/985/GCF_000306985.1_ASM30698v1/ na na na haploid bacteria 2882234 2882234 38.000000 1 1 1 NCBI RefSeq GCF_000306985.1-RS_2025_03_15 2025-03-15 2901 2774 89 23339658 GCF_000307005.1 PRJNA224116 SAMEA2272506 na na 882020 1639 Listeria monocytogenes SLCC2479 strain=SLCC2479 na latest Complete Genome Major Full 2012-09-10 ASM30700v1 ERA-NET / Spatelis GCA_000307005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/005/GCF_000307005.1_ASM30700v1/ na na na haploid bacteria 2972172 2972172 38.000000 1 1 1 NCBI RefSeq GCF_000307005.1-RS_2025_03_15 2025-03-15 3012 2898 87 23339658 GCF_000307025.1 PRJNA224116 SAMEA2271997 na na 882095 1639 Listeria monocytogenes ATCC 19117 strain=ATCC 19117 na latest Complete Genome Major Full 2012-09-10 ASM30702v1 ERA-NET / Spatelis GCA_000307025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/025/GCF_000307025.1_ASM30702v1/ na na na haploid bacteria 2951805 2951805 38.000000 1 1 1 NCBI RefSeq GCF_000307025.1-RS_2025_03_15 2025-03-15 2926 2801 89 23339658 GCF_000307045.1 PRJNA224116 SAMEA2272672 na na 882096 1639 Listeria monocytogenes SLCC5850 strain=SLCC5850 na latest Complete Genome Major Full 2012-09-10 ASM30704v1 ERA-NET / Spatelis GCA_000307045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/045/GCF_000307045.1_ASM30704v1/ na na na haploid bacteria 2907142 2907142 38.000000 1 1 1 NCBI RefSeq GCF_000307045.1-RS_2025_03_16 2025-03-16 2927 2802 89 23339658 GCF_000307065.1 PRJNA224116 SAMEA2272177 na na 882097 1639 Listeria monocytogenes SLCC2376 strain=SLCC2376 na latest Complete Genome Major Full 2012-09-10 ASM30706v1 ERA-NET / Spatelis GCA_000307065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/065/GCF_000307065.1_ASM30706v1/ na na na haploid bacteria 2840185 2840185 38.500000 1 1 1 NCBI RefSeq GCF_000307065.1-RS_2025_03_16 2025-03-16 2815 2698 89 23339658 GCF_000307085.1 PRJNA224116 SAMEA2272305 na na 882094 1639 Listeria monocytogenes L312 strain=L312 na latest Complete Genome Major Full 2012-09-20 ASM30708v1 ERA-NET / Spatelis GCA_000307085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/085/GCF_000307085.1_ASM30708v1/ na na na haploid bacteria 2912346 2912346 38.000000 1 1 1 NCBI RefSeq GCF_000307085.1-RS_2025_03_16 2025-03-16 2889 2779 89 23339658 GCF_000307105.1 PRJNA224116 SAMEA2272293 na reference genome 651182 28223 Desulfobacula toluolica Tol2 strain=Tol2 na latest Complete Genome Major Full 2012-09-17 ASM30710v1 Max Planck Society GCA_000307105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/105/GCF_000307105.1_ASM30710v1/ na assembly from type material na haploid bacteria 5197905 5197905 41.500000 1 1 1 NCBI RefSeq GCF_000307105.1-RS_2025_12_13 2025-12-13 4608 4480 66 23088741 GCF_000307145.1 PRJNA224116 SAMN02604182 na na 696748 716 Actinobacillus suis H91-0380 strain=H91-0380 na latest Chromosome Major Full 2012-10-01 ASM30714v1 University of Guelph GCA_000307145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/145/GCF_000307145.1_ASM30714v1/ na na na haploid bacteria 2484940 2484636 40.000000 1 1 2 NCBI RefSeq GCF_000307145.1-RS_2026_05_07 2026-05-07 2338 2224 82 23144422 GCF_000307165.1 PRJNA224116 SAMD00061112 na reference genome 698758 1449 Amphibacillus xylanus NBRC 15112 strain=NBRC 15112 na latest Complete Genome Major Full 2012-10-01 ASM30716v1 National Institute of Technology and Evaluation GCA_000307165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/165/GCF_000307165.1_ASM30716v1/ na assembly from type material na haploid bacteria 2569486 2569486 35.500000 1 1 1 NCBI RefSeq GCF_000307165.1-RS_2025_12_11 2025-12-11 2483 2355 77 na GCF_000307185.1 PRJNA224116 SAMD00060962 na na 617121 1334 Streptococcus dysgalactiae subsp. equisimilis RE378 strain=RE378 na latest Complete Genome Major Full 2012-10-03 ASM30718v1 Kitasato University GCA_000307185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/185/GCF_000307185.1_ASM30718v1/ na na na haploid bacteria 2151145 2151145 39.500000 1 1 1 NCBI RefSeq GCF_000307185.1-RS_2026_06_16 2026-06-16 2097 1891 75 22900646 GCF_000307265.1 PRJNA224116 SAMD00036625 BAGW00000000.1 reference genome 1007096 1263547 Oscillibacter ruminantium GH1 strain=GH1 na latest Scaffold Major Full 2012-09-12 ASM30726v1 Korea Research Institute of Bioscience and Biotechnology GCA_000307265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/265/GCF_000307265.1_ASM30726v1/ na assembly from type material na haploid bacteria 3108242 3078564 55.000000 0 29 58 NCBI RefSeq GCF_000307265.1-RS_2025_08_08 2025-08-08 2995 2894 63 23105088 GCF_000307285.2 PRJNA224116 SAMEA2272405 CAEP00000000.1 na 1033738 1033738 Kurthia sp. Dielmo strain=type strain: Dielmo na latest Scaffold Major Full 2013-05-01 ASM30728v2 laboratoire URMITE CNRS 6236 GCA_000307285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/285/GCF_000307285.2_ASM30728v2/ na na na haploid bacteria 4154514 4094738 39.000000 0 109 260 NCBI RefSeq GCF_000307285.2-RS_2026_04_26 2026-04-26 4304 4116 82 na GCF_000307345.1 PRJNA224116 SAMN02463941 AGZQ00000000.1 na 999420 46503 Parabacteroides merdae CL03T12C32 strain=CL03T12C32 na latest Scaffold Major Full 2012-10-23 Para_merd_CL03T12C32_V1 Broad Institute GCA_000307345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/345/GCF_000307345.1_Para_merd_CL03T12C32_V1/ na na na haploid bacteria 4930620 4918045 45.500000 0 13 37 NCBI RefSeq GCF_000307345.1-RS_2026_04_17 2026-04-17 4102 3905 115 na GCF_000307375.1 PRJNA224116 SAMN02463940 AGZP00000000.1 na 999419 387661 Parabacteroides johnsonii CL02T12C29 strain=CL02T12C29 na latest Scaffold Major Full 2012-10-23 Para_john_CL02T12C29_V1 Broad Institute GCA_000307375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/375/GCF_000307375.1_Para_john_CL02T12C29_V1/ na na na haploid bacteria 4629061 4613502 45.000000 0 6 37 NCBI RefSeq GCF_000307375.1-RS_2025_12_03 2025-12-03 3741 3611 82 na GCF_000307395.1 PRJNA224116 SAMN02463939 AGZO00000000.1 na 999418 328812 Parabacteroides goldsteinii CL02T12C30 strain=CL02T12C30 na latest Scaffold Major Full 2012-10-23 Para_gold_CL02T12C30_V1 Broad Institute GCA_000307395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/395/GCF_000307395.1_Para_gold_CL02T12C30_V1/ na na na haploid bacteria 6708209 6690360 43.500000 0 14 50 NCBI RefSeq GCF_000307395.1-RS_2025_12_06 2025-12-06 5382 5196 95 na GCF_000307435.1 PRJNA224116 SAMN02463938 AGZN00000000.1 na 999417 823 Parabacteroides distasonis CL09T03C24 strain=CL09T03C24 na latest Scaffold Major Full 2012-10-23 Para_dist_CL09T03C24_V1 Broad Institute GCA_000307435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/435/GCF_000307435.1_Para_dist_CL09T03C24_V1/ na na na haploid bacteria 5338538 5323016 45.000000 0 10 52 NCBI RefSeq GCF_000307435.1-RS_2025_12_06 2025-12-06 4487 4316 95 na GCF_000307455.1 PRJNA224116 SAMN02463937 AGZM00000000.1 na 999416 823 Parabacteroides distasonis CL03T12C09 strain=CL03T12C09 na latest Scaffold Major Full 2012-10-23 Para_dist_CL03T12C09_V1 Broad Institute GCA_000307455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/455/GCF_000307455.1_Para_dist_CL03T12C09_V1/ na na na haploid bacteria 5063281 5055863 45.000000 0 5 23 NCBI RefSeq GCF_000307455.1-RS_2025_12_06 2025-12-06 4250 4086 103 na GCF_000307475.1 PRJNA224116 SAMN02595347 ACUA00000000.1 na 658661 658661 Parabacteroides sp. D25 strain=D25 na latest Scaffold Major Full 2012-10-23 Paraba_sp_D25_V1 Broad Institute GCA_000307475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/475/GCF_000307475.1_Paraba_sp_D25_V1/ na na na haploid bacteria 5160574 5157107 45.000000 0 24 36 NCBI RefSeq GCF_000307475.1-RS_2025_01_08 2025-01-08 4369 4223 80 na GCF_000307495.1 PRJNA224116 SAMN02463942 AJPU00000000.1 na 999421 46503 Parabacteroides merdae CL09T00C40 strain=CL09T00C40 na latest Scaffold Major Full 2012-10-23 Para_merd_CL09T00C40_V1 Broad Institute GCA_000307495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/495/GCF_000307495.1_Para_merd_CL09T00C40_V1/ na na na haploid bacteria 4458741 4448563 45.500000 0 11 38 NCBI RefSeq GCF_000307495.1-RS_2026_04_01 2026-04-01 3653 3467 105 na GCF_000307535.1 PRJNA224116 SAMN02603640 na na 1235829 1314 Streptococcus pyogenes A20 strain=A20 na latest Complete Genome Major Full 2012-10-22 ASM30753v1 National Cheng Kung University GCA_000307535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/535/GCF_000307535.1_ASM30753v1/ na na na haploid bacteria 1837281 1837281 38.500000 1 1 1 NCBI RefSeq GCF_000307535.1-RS_2026_01_11 2026-01-11 1852 1702 89 na GCF_000307585.2 PRJNA224116 SAMN02603686 na reference genome 1094508 28896 Thermoanaerobacterium saccharolyticum JW/SL-YS485 strain=JW/SL-YS485 na latest Complete Genome Major Full 2012-06-04 ASM30758v2 Oak Ridge National Laboratory GCA_000307585.2 different https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/585/GCF_000307585.2_ASM30758v2/ na na na haploid bacteria 2837411 2837411 35.000000 2 2 2 NCBI RefSeq GCF_000307585.2-RS_2026_06_10 2026-06-10 2894 2792 77 24907337 GCF_000307615.1 PRJNA224116 SAMEA2272689 na na 879088 1639 Listeria monocytogenes SLCC2378 strain=SLCC2378 na latest Complete Genome Major Full 2012-09-10 ASM30761v1 ERA-NET / Spatelis GCA_000307615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/615/GCF_000307615.1_ASM30761v1/ na na na haploid bacteria 2941360 2941360 38.000000 1 1 1 NCBI RefSeq GCF_000307615.1-RS_2025_03_16 2025-03-16 2931 2802 88 23339658 GCF_000307675.1 PRJNA224116 SAMN02472260 AMQU00000000.1 na 996640 996640 Paenibacillus sp. ICGEB2008 strain=ICGEB2008 na latest Contig Major Full 2012-10-22 PaenICGEB1.0 International Centre for Genetic Engineering and Biotechnology GCA_000307675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/675/GCF_000307675.1_PaenICGEB1.0/ na na na haploid bacteria 5691441 5691441 45.500000 0 79 79 NCBI RefSeq GCF_000307675.1-RS_2025_08_25 2025-08-25 5183 4756 201 23405362 GCF_000307695.1 PRJNA224116 SAMN02435813 AMTC00000000.1 na 1233245 1280 Staphylococcus aureus M2 strain=M2 na latest Contig Major Full 2012-10-22 ASM30769v1 Institute for Genome Sciences GCA_000307695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/695/GCF_000307695.1_ASM30769v1/ na na na haploid bacteria 2902463 2902463 32.500000 0 133 133 NCBI RefSeq GCF_000307695.1-RS_2025_06_03 2025-06-03 2943 2734 51 23405318 GCF_000307715.1 PRJNA224116 SAMN02471545 AMQP00000000.1 na 450396 33069 Pseudomonas viridiflava UASWS0038 strain=UASWS0038 na latest Contig Major Full 2012-10-22 PseVir1.0 University of Applied Science of Western Switzerland//Geneva GCA_000307715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/715/GCF_000307715.1_PseVir1.0/ na na na haploid bacteria 5910810 5910810 59.500000 0 201 201 NCBI RefSeq GCF_000307715.1-RS_2026_04_23 2026-04-23 5348 5189 70 23405356 GCF_000307735.3 PRJNA224116 SAMN02336744 AMPR00000000.2 na 1217418 1217418 Cupriavidus sp. HPC(L) strain=HPC(L) na latest Contig Minor Full 2013-10-28 ASM30773v3 National Environmental Engineering Research Institute GCA_000307735.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/735/GCF_000307735.3_ASM30773v3/ na na na haploid bacteria 5492559 5492559 67.500000 0 475 475 NCBI RefSeq GCF_000307735.3-RS_2024_08_22 2024-08-22 5114 4907 56 na GCF_000307755.2 PRJNA224116 SAMN01822804 AMWL00000000.2 na 1239989 582 Morganella morganii SC01 strain=SC01 na latest Contig Major Full 2013-03-19 ASM30775v2 IMTECH GCA_000307755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/755/GCF_000307755.2_ASM30775v2/ na na na haploid bacteria 4150412 4150412 51.000000 0 63 63 NCBI RefSeq GCF_000307755.2-RS_2026_03_30 2026-03-30 4032 3898 77 23405333 GCF_000307775.2 PRJNA224116 SAMN02470828 AMCZ00000000.2 na 1218352 316 Stutzerimonas stutzeri KOS6 strain=KOS6 na latest Scaffold Major Full 2014-02-11 PseStu2.0 RIPCM GCA_000307775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/775/GCF_000307775.2_PseStu2.0/ na na na haploid bacteria 4947214 4855881 63.000000 0 5 91 NCBI RefSeq GCF_000307775.2-RS_2025_03_12 2025-03-12 4599 4454 62 23405317 GCF_000307795.1 PRJNA224116 SAMN02603761 na na 85962 210 Helicobacter pylori 26695 strain=26695 na latest Complete Genome Major Full 2012-10-23 ASM30779v1 RIPCM GCA_000307795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/795/GCF_000307795.1_ASM30779v1/ na na na haploid bacteria 1667892 1667892 39.000000 1 1 1 NCBI RefSeq GCF_000307795.1-RS_2026_01_11 2026-01-11 1604 1440 46 na GCF_000307815.1 PRJNA224116 SAMN02603762 na na 1234365 210 Helicobacter pylori Rif1 strain=Rif1 na latest Complete Genome Major Full 2012-10-23 ASM30781v1 RIPCM GCA_000307815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/815/GCF_000307815.1_ASM30781v1/ na na na haploid bacteria 1667883 1667883 39.000000 1 1 1 NCBI RefSeq GCF_000307815.1-RS_2026_01_27 2026-01-27 1603 1437 46 23833139 GCF_000307835.1 PRJNA224116 SAMN02603763 na na 1234600 210 Helicobacter pylori Rif2 strain=Rif2 na latest Complete Genome Major Full 2012-10-23 ASM30783v1 RIPCM GCA_000307835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/835/GCF_000307835.1_ASM30783v1/ na na na haploid bacteria 1667890 1667890 39.000000 1 1 1 NCBI RefSeq GCF_000307835.1-RS_2026_02_02 2026-02-02 1603 1440 46 23833139 GCF_000307855.1 PRJNA224116 SAMN02471786 AJLR00000000.1 na 1131731 1454 Schinkia azotoformans LMG 9581 strain=LMG 9581 na latest Contig Major Full 2012-10-23 BAZO1.0 University of Ghent GCA_000307855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/855/GCF_000307855.1_BAZO1.0/ na assembly from type material na haploid bacteria 4223247 4223247 37.000000 0 169 169 NCBI RefSeq GCF_000307855.1-RS_2026_04_02 2026-04-02 4342 4202 44 23087684 GCF_000307875.1 PRJNA224116 SAMN02471785 AJLS00000000.1 reference genome 1117379 220685 Neobacillus bataviensis LMG 21833 strain=LMG 21833 na latest Contig Major Full 2012-10-23 BABA1.0 University of Ghent GCA_000307875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/875/GCF_000307875.1_BABA1.0/ na assembly from type material na haploid bacteria 5371144 5371144 39.500000 0 197 197 NCBI RefSeq GCF_000307875.1-RS_2026_03_30 2026-03-30 5324 5189 35 23087684 GCF_000307895.1 PRJNA224116 SAMN00761223 AMFH00000000.1 na 903907 470 Acinetobacter baumannii OIFC0162 strain=OIFC0162 na latest Contig Major Full 2012-10-09 gacin19v1.0 Walter Reed Army Institute of Research GCA_000307895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/895/GCF_000307895.1_gacin19v1.0/ na na na haploid bacteria 4078399 4078399 39.000000 0 55 55 NCBI RefSeq GCF_000307895.1-RS_2025_04_18 2025-04-18 3913 3743 77 26195261 GCF_000307995.1 PRJNA224116 SAMEA2272688 CAIH00000000.1 na 1160280 1126 Microcystis aeruginosa PCC 9432 strain=PCC 9432 na latest Scaffold Major Full 2012-08-06 ASM30799v2 Genoscope CEA GCA_000307995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/307/995/GCF_000307995.1_ASM30799v2/ na na na haploid bacteria 4994942 4951242 42.500000 0 132 438 NCBI RefSeq GCF_000307995.1-RS_2026_01_07 2026-01-07 4965 4597 47 na GCF_000308015.1 PRJNA224116 SAMN00672618 AKUL00000000.1 na 1001707 36809 Mycobacteroides abscessus subsp. bolletii 1S-154-0310 strain=1S-154-0310 na latest Contig Major Full 2012-06-19 ASM30801v1 Institute for Genome Sciences GCA_000308015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/015/GCF_000308015.1_ASM30801v1/ na na na haploid bacteria 4895947 4895947 64.500000 0 5 5 NCBI RefSeq GCF_000308015.1-RS_2026_04_24 2026-04-24 4876 4771 53 na GCF_000308035.1 PRJNA224116 SAMEA2271999 CAFD00000000.1 na 1078775 28901 Salmonella enterica subsp. salamae str. 3588/07 strain=3588/07 na latest Contig Major Full 2012-09-18 ASM30803v1 Wellcome Trust Sanger Insititute GCA_000308035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/035/GCF_000308035.1_ASM30803v1/ na na na haploid bacteria 5116236 5116236 52.000000 0 138 138 NCBI RefSeq GCF_000308035.1-RS_2025_03_18 2025-03-18 5050 4677 127 na GCF_000308055.1 PRJNA224116 SAMEA2272301 CAGY00000000.1 na 1118058 1118058 Actinomyces sp. ph3 na ph3 latest Contig Major Full 2012-06-06 ASM30805v1 URMITE CNRS UMR 6236 IRD 198 GCA_000308055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/055/GCF_000308055.1_ASM30805v1/ na na na haploid bacteria 1864179 1864179 56.000000 0 10 10 NCBI RefSeq GCF_000308055.1-RS_2025_03_25 2025-03-25 1651 1590 55 na GCF_000308095.1 PRJNA224116 SAMEA2272193 CAIB00000000.1 na 1141106 1285 Staphylococcus intermedius NCTC 11048 strain=NCTC 11048 na latest Contig Major Full 2012-06-06 ASM30809v1 University of Edinburgh GCA_000308095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/095/GCF_000308095.1_ASM30809v1/ na assembly from type material na haploid bacteria 2737135 2737135 37.500000 0 286 286 NCBI RefSeq GCF_000308095.1-RS_2026_03_21 2026-03-21 2763 2647 37 na GCF_000308115.1 PRJNA224116 SAMEA2272298 CAIA00000000.1 na 1141105 53344 Staphylococcus delphini 8086 strain=8086 na latest Contig Major Full 2012-06-06 ASM30811v1 University of Edinburgh GCA_000308115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/115/GCF_000308115.1_ASM30811v1/ na na na haploid bacteria 2508206 2508206 38.500000 0 211 211 NCBI RefSeq GCF_000308115.1-RS_2026_02_14 2026-02-14 2491 2391 39 na GCF_000308175.1 PRJNA224116 SAMN01173945 AMZG00000000.1 na 1231390 294 Pseudomonas fluorescens BS2 strain=BS2 na latest Contig Major Full 2012-10-30 PseuFluoBS2 LSHTM GCA_000308175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/175/GCF_000308175.1_PseuFluoBS2/ na na na haploid bacteria 6123259 6123259 60.500000 0 122 122 NCBI RefSeq GCF_000308175.1-RS_2025_06_09 2025-06-09 5754 5575 56 na GCF_000308195.1 PRJNA224116 SAMN01164170 AMZF00000000.1 na 1231391 305977 Pusillimonas noertemannii BS8 strain=BS8 na latest Contig Major Full 2012-10-30 PusiNoerBS8 LSHTM GCA_000308195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/195/GCF_000308195.1_PusiNoerBS8/ na na na haploid bacteria 3916977 3916977 63.000000 0 121 121 NCBI RefSeq GCF_000308195.1-RS_2026_04_23 2026-04-23 3685 3589 50 na GCF_000308215.1 PRJNA224116 SAMEA3138426 CAJE00000000.1 reference genome 1175296 1080712 Methanomassiliicoccus luminyensis B10 strain=B10 na latest Contig Major Full 2012-06-06 ASM30821v1 URMITE GCA_000308215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/215/GCF_000308215.1_ASM30821v1/ na assembly from type material na haploid archaea 2620233 2620233 60.500000 0 26 26 NCBI RefSeq GCF_000308215.1-RS_2025_11_20 2025-11-20 2669 2588 53 22887657 GCF_000308235.1 PRJNA224116 SAMN02471758 ALIG00000000.1 na 1197884 52133 Acinetobacter venetianus VE-C3 strain=VE-C3 na latest Chromosome Major Full 2013-01-18 ASM30823v2 University of Florence GCA_000308235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/235/GCF_000308235.1_ASM30823v2/ na na na haploid bacteria 3544508 3543708 39.000000 2 2 10 NCBI RefSeq GCF_000308235.1-RS_2025_12_07 2025-12-07 3401 3110 97 23528645 GCF_000308275.2 PRJNA224116 SAMEA2272361 CAJN000000000.2 reference genome 938289 938289 Levyella massiliensis strain=9403326 na latest Scaffold Major Full 2013-10-15 LM2 ebi GCA_000308275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/275/GCF_000308275.2_LM2/ na assembly from type material na haploid bacteria 1713902 1710632 49.000000 0 4 9 NCBI RefSeq GCF_000308275.2-RS_2026_03_30 2026-03-30 1545 1461 58 na GCF_000308295.2 PRJNA224116 SAMEA2272295 CAJQ00000000.2 reference genome 1197906 151414 Afipia birgiae 34632 strain=34632 na latest Scaffold Major Full 2014-02-26 Ab_34632 ebi GCA_000308295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/295/GCF_000308295.2_Ab_34632/ na assembly from type material na haploid bacteria 5334146 5302466 61.000000 0 5 65 NCBI RefSeq GCF_000308295.2-RS_2026_05_26 2026-05-26 5178 4929 60 23209256 GCF_000308315.1 PRJNA224116 SAMEA2271965 CALJ00000000.1 reference genome 1034944 1034944 Legionella tunisiensis strain=LegM na latest Contig Major Full 2012-08-02 ASM30831v1 ebi GCA_000308315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/315/GCF_000308315.1_ASM30831v1/ na assembly from type material na haploid bacteria 3374751 3374751 40.000000 0 340 340 NCBI RefSeq GCF_000308315.1-RS_2025_12_13 2025-12-13 4252 3478 43 na GCF_000308355.2 PRJNA224116 SAMD00041823 BAFO00000000.2 na 1110697 1824 Nocardia asteroides NBRC 15531 strain=NBRC 15531 na latest Contig Major Full 2013-10-04 ASM30835v2 National Institute of Technology and Evaluation (NITE) GCA_000308355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/355/GCF_000308355.2_ASM30835v2/ na assembly from type material na haploid bacteria 6954782 6954782 70.000000 0 39 39 NCBI RefSeq GCF_000308355.2-RS_2025_08_09 2025-08-09 6492 6355 58 24884595 GCF_000308375.1 PRJNA224116 SAMD00041780 BAFQ00000000.1 reference genome 1206720 257277 Nocardia aobensis NBRC 100429 strain=NBRC 100429 na latest Contig Major Full 2012-07-13 ASM30837v1 National Institute of Technology and Evaluation GCA_000308375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/375/GCF_000308375.1_ASM30837v1/ na assembly from type material na haploid bacteria 7548062 7548062 68.000000 0 298 298 NCBI RefSeq GCF_000308375.1-RS_2025_09_02 2025-09-02 7055 6824 59 na GCF_000308395.1 PRJNA224116 SAMN01103171 AMCS00000000.1 na 1220510 1282 Staphylococcus epidermidis AU12-03 strain=AU12-03 na latest Contig Major Full 2012-09-24 ASM30839v1 Griffith University GCA_000308395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/395/GCF_000308395.1_ASM30839v1/ na na na haploid bacteria 2406624 2406624 32.000000 0 50 50 NCBI RefSeq GCF_000308395.1-RS_2026_03_21 2026-03-21 2329 2175 65 23144393 GCF_000308415.1 PRJNA224116 SAMD00041765 BAFS00000000.1 reference genome 1206721 209252 Nocardia asiatica NBRC 100129 strain=NBRC 100129 na latest Contig Major Full 2012-07-13 ASM30841v1 National Institute of Technology and Evaluation GCA_000308415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/415/GCF_000308415.1_ASM30841v1/ na assembly from type material na haploid bacteria 8461316 8461316 68.500000 0 475 475 NCBI RefSeq GCF_000308415.1-RS_2025_09_02 2025-09-02 8087 7770 56 na GCF_000308435.1 PRJNA224116 SAMD00041768 BAFR00000000.1 reference genome 1206722 228600 Nocardia araoensis NBRC 100135 strain=NBRC 100135 na latest Contig Major Full 2012-07-13 ASM30843v1 National Institute of Technology and Evaluation GCA_000308435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/435/GCF_000308435.1_ASM30843v1/ na assembly from type material na haploid bacteria 7722536 7722536 68.500000 0 352 352 NCBI RefSeq GCF_000308435.1-RS_2025_09_02 2025-09-02 7288 6997 56 na GCF_000308455.1 PRJNA224116 SAMD00041774 BAFP00000000.1 na 1206723 120957 Nocardia abscessus NBRC 100374 strain=NBRC 100374 na latest Contig Major Full 2012-07-13 ASM30845v1 National Institute of Technology and Evaluation GCA_000308455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/455/GCF_000308455.1_ASM30845v1/ na assembly from type material na haploid bacteria 8410401 8410401 68.000000 0 274 274 NCBI RefSeq GCF_000308455.1-RS_2025_08_02 2025-08-02 7886 7628 59 na GCF_000308475.2 PRJNA224116 SAMD00016800 BAFT00000000.2 na 1206724 37326 Nocardia brasiliensis NBRC 14402 strain=NBRC 14402 na latest Contig Major Full 2014-05-15 ASM30847v2 National Institute of Technology and Evaluation GCA_000308475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/475/GCF_000308475.2_ASM30847v2/ na assembly from type material na haploid bacteria 8895094 8895094 68.000000 0 115 115 NCBI RefSeq GCF_000308475.2-RS_2025_08_08 2025-08-08 8171 7983 59 24884595 GCF_000308495.1 PRJNA224116 SAMD00041812 BAFU00000000.1 reference genome 1206725 37327 Nocardia brevicatena NBRC 12119 strain=NBRC 12119 na latest Contig Major Full 2012-07-13 ASM30849v1 National Institute of Technology and Evaluation GCA_000308495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/495/GCF_000308495.1_ASM30849v1/ na assembly from type material na haploid bacteria 7007170 7007170 67.000000 0 248 248 NCBI RefSeq GCF_000308495.1-RS_2025_08_02 2025-08-02 6726 6352 55 na GCF_000308515.1 PRJNA224116 SAMD00041818 BAFV00000000.1 reference genome 1206726 37328 Nocardia carnea NBRC 14403 strain=NBRC 14403 na latest Contig Major Full 2012-07-13 ASM30851v1 National Institute of Technology and Evaluation GCA_000308515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/515/GCF_000308515.1_ASM30851v1/ na assembly from type material na haploid bacteria 7492940 7492940 67.000000 0 126 126 NCBI RefSeq GCF_000308515.1-RS_2025_09_02 2025-09-02 6942 6766 54 na GCF_000308535.1 PRJNA224116 SAMD00041789 BAFW00000000.1 na 1206727 85688 Nocardia cerradoensis NBRC 101014 strain=NBRC 101014 na latest Contig Major Full 2012-07-13 ASM30853v1 National Institute of Technology and Evaluation GCA_000308535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/535/GCF_000308535.1_ASM30853v1/ na assembly from type material na haploid bacteria 7602329 7602329 68.000000 0 388 388 NCBI RefSeq GCF_000308535.1-RS_2025_09_02 2025-09-02 7218 6969 58 na GCF_000308555.1 PRJNA224116 SAMD00041775 BAFY00000000.1 na 1206728 135487 Nocardia cyriacigeorgica NBRC 100375 strain=NBRC 100375 na latest Contig Major Full 2012-07-13 ASM30855v1 National Institute of Technology and Evaluation GCA_000308555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/555/GCF_000308555.1_ASM30855v1/ na assembly from type material na haploid bacteria 6311306 6311306 68.000000 0 328 328 NCBI RefSeq GCF_000308555.1-RS_2024_09_03 2024-09-03 5918 5674 60 na GCF_000308575.1 PRJNA224116 SAMD00041785 BAFZ00000000.1 reference genome 1206729 290231 Nocardia exalbida NBRC 100660 strain=NBRC 100660 na latest Contig Major Full 2012-07-13 ASM30857v1 National Institute of Technology and Evaluation GCA_000308575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/575/GCF_000308575.1_ASM30857v1/ na assembly from type material na haploid bacteria 7367991 7367991 68.500000 0 165 165 NCBI RefSeq GCF_000308575.1-RS_2025_09_02 2025-09-02 6848 6646 58 na GCF_000308595.1 PRJNA224116 SAMD00041767 BAGA00000000.1 reference genome 1206730 228599 Nocardia higoensis NBRC 100133 strain=NBRC 100133 na latest Contig Major Full 2012-07-16 ASM30859v1 National Institute of Technology and Evaluation GCA_000308595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/595/GCF_000308595.1_ASM30859v1/ na assembly from type material na haploid bacteria 6980705 6980705 69.500000 0 185 185 NCBI RefSeq GCF_000308595.1-RS_2025_09_02 2025-09-02 6401 6224 57 na GCF_000308615.1 PRJNA224116 SAMD00041792 BAGB00000000.1 reference genome 1206731 282685 Nocardia jiangxiensis NBRC 101359 strain=NBRC 101359 na latest Contig Major Full 2012-07-16 ASM30861v1 National Institute of Technology and Evaluation GCA_000308615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/615/GCF_000308615.1_ASM30861v1/ na assembly from type material na haploid bacteria 10445918 10445918 67.000000 0 174 174 NCBI RefSeq GCF_000308615.1-RS_2025_09_02 2025-09-02 9722 9434 56 na GCF_000308635.1 PRJNA224116 SAMD00041819 BAGD00000000.1 na 1206732 1823 Nocardia otitidiscaviarum NBRC 14405 strain=NBRC 14405 na latest Contig Major Full 2012-07-16 ASM30863v1 National Institute of Technology and Evaluation GCA_000308635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/635/GCF_000308635.1_ASM30863v1/ na assembly from type material na haploid bacteria 7482555 7482555 69.000000 0 281 281 NCBI RefSeq GCF_000308635.1-RS_2025_09_02 2025-09-02 6993 6766 80 na GCF_000308655.1 PRJNA224116 SAMD00041766 BAGC00000000.1 reference genome 1206733 209249 Nocardia niigatensis NBRC 100131 strain=NBRC 100131 na latest Contig Major Full 2012-07-16 ASM30865v1 National Institute of Technology and Evaluation GCA_000308655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/655/GCF_000308655.1_ASM30865v1/ na assembly from type material na haploid bacteria 8224214 8224214 68.000000 0 114 114 NCBI RefSeq GCF_000308655.1-RS_2025_09_02 2025-09-02 7788 7521 74 na GCF_000308675.1 PRJNA224116 SAMD00041773 BAGE00000000.1 reference genome 1206734 114259 Nocardia paucivorans NBRC 100373 strain=NBRC 100373 na latest Contig Major Full 2012-07-16 ASM30867v1 National Institute of Technology and Evaluation GCA_000308675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/675/GCF_000308675.1_ASM30867v1/ na assembly from type material na haploid bacteria 6001070 6001070 66.500000 0 128 128 NCBI RefSeq GCF_000308675.1-RS_2025_09_02 2025-09-02 5370 5198 55 na GCF_000308695.1 PRJNA224116 SAMD00041777 BAGG00000000.1 reference genome 1206735 259390 Nocardia takedensis NBRC 100417 strain=NBRC 100417 na latest Contig Major Full 2012-07-16 ASM30869v1 National Institute of Technology and Evaluation GCA_000308695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/695/GCF_000308695.1_ASM30869v1/ na assembly from type material na haploid bacteria 8033873 8033873 69.500000 0 266 266 NCBI RefSeq GCF_000308695.1-RS_2025_09_02 2025-09-02 7323 7086 59 na GCF_000308715.1 PRJNA224116 SAMD00041790 BAGH00000000.1 na 1206736 228006 Nocardia tenerifensis NBRC 101015 strain=NBRC 101015 na latest Contig Major Full 2012-07-16 ASM30871v1 National Institute of Technology and Evaluation GCA_000308715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/715/GCF_000308715.1_ASM30871v1/ na assembly from type material na haploid bacteria 9731570 9731570 68.500000 0 615 615 NCBI RefSeq GCF_000308715.1-RS_2025_09_02 2025-09-02 9284 8937 66 na GCF_000308755.1 PRJNA224116 SAMD00041769 BAGF00000000.1 reference genome 1206737 228601 Nocardia pneumoniae NBRC 100136 strain=NBRC 100136 na latest Contig Major Full 2012-07-16 ASM30875v1 National Institute of Technology and Evaluation GCA_000308755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/755/GCF_000308755.1_ASM30875v1/ na assembly from type material na haploid bacteria 7588197 7588197 68.000000 0 152 152 NCBI RefSeq GCF_000308755.1-RS_2025_09_02 2025-09-02 6797 6634 55 na GCF_000308775.1 PRJNA224116 SAMD00041772 BAGJ00000000.1 reference genome 1206739 248551 Nocardia testacea NBRC 100365 strain=NBRC 100365 na latest Contig Major Full 2012-07-16 ASM30877v1 National Institute of Technology and Evaluation GCA_000308775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/775/GCF_000308775.1_ASM30877v1/ na assembly from type material na haploid bacteria 7268410 7268410 68.500000 0 274 274 NCBI RefSeq GCF_000308775.1-RS_2025_09_02 2025-09-02 6862 6630 54 na GCF_000308795.1 PRJNA224116 SAMD00041779 BAGK00000000.1 reference genome 1206740 257275 Nocardia thailandica NBRC 100428 strain=NBRC 100428 na latest Contig Major Full 2012-07-16 ASM30879v1 National Institute of Technology and Evaluation GCA_000308795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/795/GCF_000308795.1_ASM30879v1/ na assembly from type material na haploid bacteria 6821826 6821826 71.500000 0 312 312 NCBI RefSeq GCF_000308795.1-RS_2025_09_02 2025-09-02 6657 6428 74 na GCF_000308815.1 PRJNA224116 SAMD00041781 BAFX00000000.1 reference genome 1206741 257281 Nocardia concava NBRC 100430 strain=NBRC 100430 na latest Contig Major Full 2012-07-13 ASM30881v1 National Institute of Technology and Evaluation GCA_000308815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/815/GCF_000308815.1_ASM30881v1/ na assembly from type material na haploid bacteria 8933351 8933351 67.500000 0 206 206 NCBI RefSeq GCF_000308815.1-RS_2025_09_02 2025-09-02 8531 8328 79 na GCF_000308835.1 PRJNA224116 SAMD00041831 BAGN00000000.1 na 1206742 96468 Nocardia vinacea NBRC 16497 strain=NBRC 16497 na latest Contig Major Full 2012-07-16 ASM30883v1 National Institute of Technology and Evaluation GCA_000308835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/835/GCF_000308835.1_ASM30883v1/ na assembly from type material na haploid bacteria 10155283 10155283 65.500000 0 429 429 NCBI RefSeq GCF_000308835.1-RS_2025_09_02 2025-09-02 9421 9092 67 na GCF_000308855.1 PRJNA224116 SAMD00041771 BAGM00000000.1 reference genome 1206743 132249 Nocardia veterana NBRC 100344 strain=NBRC 100344 na latest Contig Major Full 2012-07-13 ASM30885v1 National Institute of Technology and Evaluation GCA_000308855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/855/GCF_000308855.1_ASM30885v1/ na assembly from type material na haploid bacteria 6785212 6785212 68.000000 0 210 210 NCBI RefSeq GCF_000308855.1-RS_2025_09_02 2025-09-02 6196 6018 57 na GCF_000308875.1 PRJNA224116 SAMD00041825 BAGL00000000.1 na 1206744 37333 Nocardia transvalensis NBRC 15921 strain=NBRC 15921 na latest Contig Major Full 2012-07-16 ASM30887v1 National Institute of Technology and Evaluation GCA_000308875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/875/GCF_000308875.1_ASM30887v1/ na assembly from type material na haploid bacteria 8383303 8383303 69.000000 0 128 128 NCBI RefSeq GCF_000308875.1-RS_2025_09_02 2025-09-02 7905 7709 62 na GCF_000308895.1 PRJNA224116 SAMD00036613 BAFA00000000.1 na 1147034 1280 Staphylococcus aureus PM1 strain=PM1 na latest Contig Major Full 2012-07-10 ASM30889v1 Niigata University Graduate School of Medical and Dental Sciences GCA_000308895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/895/GCF_000308895.1_ASM30889v1/ na na na haploid bacteria 2827649 2827649 33.000000 0 90 90 NCBI RefSeq GCF_000308895.1-RS_2025_09_15 2025-09-15 2853 2681 67 na GCF_000308915.1 PRJNA224116 SAMD00036616 BAFI00000000.1 na 1161392 1280 Staphylococcus aureus NN54 strain=NN54 na latest Contig Major Full 2012-07-10 ASM30891v1 Niigata University Graduate School ofMedical and Dental Sciences GCA_000308915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/915/GCF_000308915.1_ASM30891v1/ na na na haploid bacteria 2886833 2886833 32.500000 0 60 60 NCBI RefSeq GCF_000308915.1-RS_2025_08_18 2025-08-18 2909 2754 72 na GCF_000308995.1 PRJNA224116 SAMN02471261 AMHR00000000.1 na 1221262 470 Acinetobacter baumannii AB_2008-23-07-01-7 strain=AB_2008-23-07-01-7 na latest Contig Major Full 2012-10-02 ASM30899v1 Translational Genomics Research Institute GCA_000308995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/308/995/GCF_000308995.1_ASM30899v1/ na na na haploid bacteria 3995020 3995020 39.000000 0 242 242 NCBI RefSeq GCF_000308995.1-RS_2026_02_02 2026-02-02 3962 3796 67 na GCF_000309015.1 PRJNA224116 SAMN02471237 AMIX00000000.1 na 1221294 471 Acinetobacter calcoaceticus TG19588 strain=TG19588 na latest Contig Major Full 2012-10-02 ASM30901v1 Translational Genomics Research Institute GCA_000309015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/015/GCF_000309015.1_ASM30901v1/ na na na haploid bacteria 3902769 3902769 38.500000 0 31 31 NCBI RefSeq GCF_000309015.1-RS_2025_12_22 2025-12-22 3753 3615 68 na GCF_000309035.1 PRJNA224116 SAMN02471288 AMJB00000000.1 na 1221298 29430 Acinetobacter haemolyticus TG19602 strain=TG19602 na latest Contig Major Full 2012-10-02 ASM30903v1 Translational Genomics Research Institute GCA_000309035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/035/GCF_000309035.1_ASM30903v1/ na na na haploid bacteria 3578946 3578946 39.500000 0 382 382 NCBI RefSeq GCF_000309035.1-RS_2026_05_23 2026-05-23 3593 3282 80 na GCF_000309055.1 PRJNA224116 SAMD00036621 BAGQ00000000.1 na 1214063 1767 Mycobacterium intracellulare M.i.198 strain=M.i.198 na latest Contig Major Full 2012-09-05 Mintra_1.0 Osaka City University GCA_000309055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/055/GCF_000309055.1_Mintra_1.0/ na na na haploid bacteria 5405566 5405566 68.000000 0 149 149 NCBI RefSeq GCF_000309055.1-RS_2025_08_09 2025-08-09 5211 4855 51 23105072 GCF_000309095.1 PRJNA224116 SAMN00761219 AMFS00000000.1 na 903929 470 Acinetobacter baumannii OIFC087 strain=OIFC087 na latest Contig Major Full 2012-10-31 gacin42v1.0 Walter Reed Army Institute of Research GCA_000309095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/095/GCF_000309095.1_gacin42v1.0/ na na na haploid bacteria 4004682 4004682 39.000000 0 96 96 NCBI RefSeq GCF_000309095.1-RS_2025_04_23 2025-04-23 3954 3706 94 26195261 GCF_000309115.1 PRJNA224116 SAMN00761244 AMFV00000000.1 na 903932 470 Acinetobacter baumannii OIFC065 strain=OIFC065 na latest Contig Major Full 2012-10-31 gacin45v1.0 Walter Reed Army Institute of Research GCA_000309115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/115/GCF_000309115.1_gacin45v1.0/ na na na haploid bacteria 4029646 4029646 39.000000 0 54 54 NCBI RefSeq GCF_000309115.1-RS_2026_06_17 2026-06-17 3942 3808 80 26195261 GCF_000309135.1 PRJNA224116 SAMN00761236 AMFT00000000.1 na 903930 470 Acinetobacter baumannii OIFC099 strain=OIFC099 na latest Contig Major Full 2012-10-31 gacin43v1.0 Walter Reed Army Institute of Research GCA_000309135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/135/GCF_000309135.1_gacin43v1.0/ na na na haploid bacteria 3918177 3918177 39.000000 0 75 75 NCBI RefSeq GCF_000309135.1-RS_2025_04_23 2025-04-23 3802 3605 84 26195261 GCF_000309155.1 PRJNA224116 SAMN00761246 AMFY00000000.1 na 903935 470 Acinetobacter baumannii OIFC111 strain=OIFC111 na latest Contig Major Full 2012-10-31 gacin48v1.0 Walter Reed Army Institute of Research GCA_000309155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/155/GCF_000309155.1_gacin48v1.0/ na na na haploid bacteria 3988061 3988061 39.000000 0 44 44 NCBI RefSeq GCF_000309155.1-RS_2026_06_17 2026-06-17 3829 3665 114 26195261 GCF_000309175.1 PRJNA224116 SAMN00761227 AMSX00000000.1 na 903922 470 Acinetobacter baumannii Naval-2 strain=Naval-2 na latest Contig Major Full 2012-10-31 gacin34v1.0 Walter Reed Army Institute of Research GCA_000309175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/175/GCF_000309175.1_gacin34v1.0/ na na na haploid bacteria 4126550 4126550 39.000000 0 114 114 NCBI RefSeq GCF_000309175.1-RS_2025_04_24 2025-04-24 4073 3855 81 26195261 GCF_000309195.1 PRJNA224116 SAMN00761242 AMSY00000000.1 na 903923 470 Acinetobacter baumannii Naval-21 strain=Naval-21 na latest Contig Major Full 2012-10-31 gacin35v1.0 Walter Reed Army Institute of Research GCA_000309195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/195/GCF_000309195.1_gacin35v1.0/ na na na haploid bacteria 3923796 3923796 39.000000 0 75 75 NCBI RefSeq GCF_000309195.1-RS_2025_04_23 2025-04-23 3832 3622 77 26195261 GCF_000309215.1 PRJNA224116 SAMN00761243 AMTA00000000.1 na 903925 470 Acinetobacter baumannii WC-A-694 strain=WC-A-694 na latest Contig Major Full 2012-10-31 gacin37v1.0 Walter Reed Army Institute of Research GCA_000309215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/215/GCF_000309215.1_gacin37v1.0/ na na na haploid bacteria 4008103 4008103 39.000000 0 82 82 NCBI RefSeq GCF_000309215.1-RS_2025_04_23 2025-04-23 3907 3685 110 26195261 GCF_000309235.1 PRJNA224116 SAMN00761235 AMTB00000000.1 na 903926 470 Acinetobacter baumannii OIFC035 strain=OIFC035 na latest Contig Major Full 2012-10-31 gacin38v1.0 Walter Reed Army Institute of Research GCA_000309235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/235/GCF_000309235.1_gacin38v1.0/ na na na haploid bacteria 3972611 3972611 39.000000 0 44 44 NCBI RefSeq GCF_000309235.1-RS_2025_04_15 2025-04-15 3797 3645 81 26195261 GCF_000309255.1 PRJNA224116 SAMN00761226 AMSW00000000.1 na 903921 470 Acinetobacter baumannii Naval-82 strain=Naval-82 na latest Contig Major Full 2012-10-31 gacin33v1.0 Walter Reed Army Institute of Research GCA_000309255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/255/GCF_000309255.1_gacin33v1.0/ na na na haploid bacteria 3908929 3908929 39.000000 0 197 197 NCBI RefSeq GCF_000309255.1-RS_2025_04_24 2025-04-24 3942 3547 94 26195261 GCF_000309275.1 PRJNA224116 SAMN00761234 AMSZ00000000.1 na 903924 470 Acinetobacter baumannii Canada BC1 strain=Canada BC1 na latest Contig Major Full 2012-10-31 gacin36v1.0 Walter Reed Army Institute of Research GCA_000309275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/275/GCF_000309275.1_gacin36v1.0/ na na na haploid bacteria 3936404 3936404 39.000000 0 66 66 NCBI RefSeq GCF_000309275.1-RS_2025_04_23 2025-04-23 3847 3629 86 26195261 GCF_000309315.1 PRJNA224116 SAMEA2271919 CANG00000000.1 na 304766 304766 Sedimentibacter sp. B4 strain=B4 na latest Contig Major Full 2012-09-21 ASM30931v1 WUR GCA_000309315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/315/GCF_000309315.1_ASM30931v1/ na na na haploid bacteria 4106353 4106353 38.000000 0 1164 1164 NCBI RefSeq GCF_000309315.1-RS_2024_08_01 2024-08-01 4373 3907 65 na GCF_000309385.1 PRJNA224116 SAMN02261265 ALVP00000000.1 reference genome 118166 416001 Nodosilinea nodulosa PCC 7104 strain=PCC 7104 na latest Scaffold Major Full 2012-11-05 ASM30938v1 JGI GCA_000309385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/385/GCF_000309385.1_ASM30938v1/ na na na haploid bacteria 6891283 6885283 57.500000 0 2 62 NCBI RefSeq GCF_000309385.1-RS_2026_04_14 2026-04-14 6360 6131 50 23277585 GCF_000309405.1 PRJNA224116 SAMN01041252 AKIN00000000.1 na 1196419 85642 Vaccinium witches'-broom phytoplasma str. VAC strain=VAC na latest Contig Major Full 2012-10-01 ASM30940v1 Università di Udine GCA_000309405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/405/GCF_000309405.1_ASM30940v1/ na na na haploid bacteria 647754 647754 27.500000 0 272 272 NCBI RefSeq GCF_000309405.1-RS_2025_04_26 2025-04-26 729 595 31 22936033 GCF_000309425.1 PRJNA224116 SAMN02471119 AJTO00000000.1 na 1160703 1247 Oenococcus oeni AWRIB202 strain=AWRIB202 na latest Contig Major Full 2012-11-01 AWRIB202_v1 The Australian Wine Research Institute GCA_000309425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/425/GCF_000309425.1_AWRIB202_v1/ na na na haploid bacteria 1840757 1840757 38.000000 0 36 36 NCBI RefSeq GCF_000309425.1-RS_2026_01_23 2026-01-23 1929 1800 51 22863143 GCF_000309445.1 PRJNA224116 SAMN02471116 AJTP00000000.1 na 1122618 1247 Oenococcus oeni DSM 20252 = AWRIB129 strain=DSM 20252 na latest Contig Major Full 2012-11-01 AWRIB129_v1 The Australian Wine Research Institute GCA_000309445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/445/GCF_000309445.1_AWRIB129_v1/ na assembly from type material na haploid bacteria 1729193 1729193 38.000000 0 42 42 NCBI RefSeq GCF_000309445.1-RS_2026_03_17 2026-03-17 1793 1654 51 22863143 GCF_000309465.1 PRJNA224116 SAMN01041249 AKIK00000000.1 na 1196416 138647 Poinsettia branch-inducing phytoplasma str. JR1 strain=JR1 na latest Contig Major Full 2012-10-01 ASM30946v1 Università di Udine GCA_000309465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/465/GCF_000309465.1_ASM30946v1/ na na na haploid bacteria 631440 631440 27.500000 0 185 185 NCBI RefSeq GCF_000309465.1-RS_2025_04_26 2025-04-26 670 579 33 22936033 GCF_000309485.1 PRJNA224116 SAMN01041251 AKIL00000000.1 na 1196417 208434 Milkweed yellows phytoplasma str. MW1 strain=MW1 na latest Contig Major Full 2012-10-01 ASM30948v1 Università di Udine GCA_000309485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/485/GCF_000309485.1_ASM30948v1/ na na na haploid bacteria 583806 583806 27.500000 0 158 158 NCBI RefSeq GCF_000309485.1-RS_2025_04_26 2025-04-26 585 511 34 22936033 GCF_000309505.2 PRJNA224116 SAMEA2272049 CAJM00000000.2 na 1185418 573 Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO strain=ST512-K30BO na latest Contig Major Full 2012-12-04 ASM30950v2 UNIMI GCA_000309505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/505/GCF_000309505.2_ASM30950v2/ na na na haploid bacteria 5392844 5392844 57.000000 0 289 289 NCBI RefSeq GCF_000309505.2-RS_2026_01_06 2026-01-06 5733 5235 108 na GCF_000309845.1 PRJNA224116 SAMN01813472 ALXI00000000.1 na 1196322 1196322 Clostridium sp. Maddingley MBC34-26 na na latest Contig Major Full 2012-11-02 Csp_Mad1.0 CSIRO GCA_000309845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/845/GCF_000309845.1_Csp_Mad1.0/ derived from metagenome na na haploid bacteria 6197269 6197269 30.000000 0 184 184 NCBI RefSeq GCF_000309845.1-RS_2024_07_14 2024-07-14 5831 5676 63 23405323 GCF_000309885.1 PRJNA224116 SAMN02261408 na reference genome 751945 56957 Thermus oshimai JL-2 strain=JL-2 na latest Complete Genome Major Full 2012-11-05 ASM30988v1 JGI GCA_000309885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/885/GCF_000309885.1_ASM30988v1/ na na na haploid bacteria 2401329 2401329 68.500000 3 3 3 NCBI RefSeq GCF_000309885.1-RS_2026_03_28 2026-03-28 2556 2444 60 23405355 GCF_000309905.1 PRJNA224116 SAMN02469610 AHIB00000000.1 na 1118965 346 Xanthomonas citri pv. malvacearum str. GSPB1386 strain=GSPB1386 na latest Contig Major Full 2012-11-05 ASM30990v1 Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources /Institute of Bioscience and Technology, College of Agriculture, Hainan University GCA_000309905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/905/GCF_000309905.1_ASM30990v1/ na na na haploid bacteria 4974255 4974255 64.500000 0 127 127 NCBI RefSeq GCF_000309905.1-RS_2026_05_16 2026-05-16 4323 4002 89 na GCF_000309925.1 PRJNA224116 SAMN02469611 AHIC00000000.1 na 1127439 346 Xanthomonas citri pv. malvacearum str. GSPB2388 strain=GSPB22388 na latest Contig Major Full 2012-11-05 ASM30992v1 Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources /Institute of Bioscience and Technology, College of Agriculture, Hainan University GCA_000309925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/309/925/GCF_000309925.1_ASM30992v1/ na na na haploid bacteria 5117844 5117844 64.500000 0 61 61 NCBI RefSeq GCF_000309925.1-RS_2026_05_16 2026-05-16 4423 4121 95 na GCF_000310005.2 PRJNA224116 SAMN02436927 ANFP00000000.1 na 1159019 210 Helicobacter pylori GAM100Ai strain=GAM100Ai na latest Scaffold Minor Full 2012-11-06 ASM31000v2 Washington University GCA_000310005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/005/GCF_000310005.2_ASM31000v2/ na na na haploid bacteria 1633043 1632383 39.500000 0 46 79 NCBI RefSeq GCF_000310005.2-RS_2026_01_21 2026-01-21 1601 1474 42 na GCF_000310045.1 PRJNA224116 SAMN02470598 ANAO00000000.1 na 1245029 1392 Bacillus anthracis str. Carbosap strain=Carbosap na latest Contig Major Full 2012-11-05 Carbosap_v1 National Biodefense Analysis & Countermeasures Center GCA_000310045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/045/GCF_000310045.1_Carbosap_v1/ na na na haploid bacteria 5402970 5402970 35.000000 0 21 21 NCBI RefSeq GCF_000310045.1-RS_2026_04_30 2026-04-30 5738 5223 131 23405332 GCF_000310065.1 PRJNA224116 SAMN02603885 na na 1171373 1748 Acidipropionibacterium acidipropionici ATCC 4875 strain=ATCC 4875 na latest Complete Genome Major Full 2012-11-06 ASM31006v1 State University of Campinas GCA_000310065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/065/GCF_000310065.1_ASM31006v1/ na na na haploid bacteria 3656170 3656170 69.000000 1 1 1 NCBI RefSeq GCF_000310065.1-RS_2026_01_15 2026-01-15 3400 3261 69 23083487 GCF_000310085.1 PRJNA224116 SAMN02604119 na na 1004786 314275 Alteromonas mediterranea DE1 strain=AltDE1 na latest Complete Genome Major Full 2012-11-06 ASM31008v1 University Miguel Hernandez GCA_000310085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/085/GCF_000310085.1_ASM31008v1/ na na na haploid bacteria 4947126 4947126 44.500000 2 2 2 NCBI RefSeq GCF_000310085.1-RS_2026_03_03 2026-03-03 4399 4238 87 na GCF_000310105.2 PRJNA224116 SAMN02470817 na na 283699 283699 Pseudoalteromonas sp. Bsw20308 strain=Bsw20308 na latest Complete Genome Major Full 2015-11-30 ASM31010v2 Polar Research Institute of China GCA_000310105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/105/GCF_000310105.2_ASM31010v2/ na na na haploid bacteria 4830226 4830226 39.000000 2 2 2 NCBI RefSeq GCF_000310105.2-RS_2025_03_25 2025-03-25 4225 4032 129 30362272 GCF_000310125.2 PRJNA224116 SAMN02470722 AMXB00000000.1 na 305700 305700 Thauera sp. 27 strain=27 na latest Contig Minor Full 2012-11-06 ASM31012v2 Norwegian University of Life Sciences GCA_000310125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/125/GCF_000310125.2_ASM31012v2/ na na na haploid bacteria 4703261 4703261 66.000000 0 127 127 NCBI RefSeq GCF_000310125.2-RS_2025_08_25 2025-08-25 4373 4272 60 na GCF_000310145.2 PRJNA224116 SAMN02470719 AMXA00000000.1 na 303682 303682 Thauera sp. 28 strain=28 na latest Contig Minor Full 2012-11-06 ASM31014v2 Norwegian University of Life Sciences GCA_000310145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/145/GCF_000310145.2_ASM31014v2/ na na na haploid bacteria 4314265 4314265 66.000000 0 118 118 NCBI RefSeq GCF_000310145.2-RS_2025_08_25 2025-08-25 3980 3871 64 na GCF_000310165.2 PRJNA224116 SAMN02470720 AMXC00000000.1 na 497321 497321 Thauera sp. 63 strain=63 na latest Contig Minor Full 2012-11-06 ASM31016v2 Norwegian University of Life Sciences GCA_000310165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/165/GCF_000310165.2_ASM31016v2/ na na na haploid bacteria 4275823 4275823 66.500000 0 102 102 NCBI RefSeq GCF_000310165.2-RS_2025_08_25 2025-08-25 4076 3954 63 na GCF_000310185.1 PRJNA224116 SAMN02470715 AMXD00000000.1 na 1234381 164330 Thauera aminoaromatica S2 strain=S2 na latest Contig Major Full 2012-11-06 ASM31018v1 Norwegian University of Life Sciences GCA_000310185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/185/GCF_000310185.1_ASM31018v1/ na assembly from type material na haploid bacteria 4280700 4280700 68.500000 0 317 317 NCBI RefSeq GCF_000310185.1-RS_2025_08_20 2025-08-20 4068 3870 61 na GCF_000310205.1 PRJNA224116 SAMN02470716 AMXE00000000.1 na 1123367 76112 Thauera linaloolentis 47Lol = DSM 12138 strain=47Lol = DSM 12138 na latest Contig Major Full 2012-11-06 ASM31020v1 Norwegian University of Life Sciences GCA_000310205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/205/GCF_000310205.1_ASM31020v1/ na assembly from type material na haploid bacteria 4199939 4199939 66.500000 0 220 220 NCBI RefSeq GCF_000310205.1-RS_2025_08_20 2025-08-20 3942 3809 62 na GCF_000310225.1 PRJNA224116 SAMN02470717 AMXF00000000.1 reference genome 1234382 164400 Thauera phenylacetica B4P strain=B4P na latest Contig Major Full 2012-11-06 ASM31022v1 Norwegian University of Life Sciences GCA_000310225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/225/GCF_000310225.1_ASM31022v1/ na assembly from type material na haploid bacteria 5022393 5022393 68.500000 0 681 681 NCBI RefSeq GCF_000310225.1-RS_2025_08_20 2025-08-20 4992 4709 67 na GCF_000310245.1 PRJNA224116 SAMN01162293 na na 1249480 1249480 Candidatus Sulfuricurvum sp. RIFRC-1 na RIFRC-1 latest Complete Genome Major Full 2012-11-07 ASM31024v1 Argonne National Laboratory GCA_000310245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/245/GCF_000310245.1_ASM31024v1/ derived from metagenome na na haploid bacteria 2360313 2360313 43.500000 2 2 2 NCBI RefSeq GCF_000310245.1-RS_2024_07_15 2024-07-15 2434 2368 60 na GCF_000310265.1 PRJNA224116 SAMN00993323 ANEX00000000.1 na 1154885 1311 Streptococcus agalactiae LDS 623 strain=LDS 623 na latest Contig Major Full 2012-11-07 ASM31026v1 The J. Craig Venter Institute GCA_000310265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/265/GCF_000310265.1_ASM31026v1/ na na na haploid bacteria 2084949 2084949 35.500000 0 129 129 NCBI RefSeq GCF_000310265.1-RS_2026_01_13 2026-01-13 2256 2050 45 na GCF_000310285.1 PRJNA224116 SAMN00993351 ANCK00000000.1 na 1154771 1311 Streptococcus agalactiae FSL C1-487 strain=FSL C1-487 na latest Contig Major Full 2012-11-07 ASM31028v1 The J. Craig Venter Institute GCA_000310285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/285/GCF_000310285.1_ASM31028v1/ na na na haploid bacteria 2234370 2234370 35.500000 0 124 124 NCBI RefSeq GCF_000310285.1-RS_2026_01_11 2026-01-11 2282 2109 27 na GCF_000310305.1 PRJNA224116 SAMN00993722 ANEJ00000000.1 na 1154848 1311 Streptococcus agalactiae STIR-CD-14 strain=STIR-CD-14 na latest Contig Major Full 2012-11-07 ASM31030v1 The J. Craig Venter Institute GCA_000310305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/305/GCF_000310305.1_ASM31030v1/ na na na haploid bacteria 2064231 2064231 35.000000 0 25 25 NCBI RefSeq GCF_000310305.1-RS_2026_02_09 2026-02-09 2113 1994 46 na GCF_000310325.1 PRJNA224116 SAMN00993656 ANEL00000000.1 na 1154854 1311 Streptococcus agalactiae STIR-CD-26 strain=STIR-CD-26 na latest Contig Major Full 2012-11-07 ASM31032v1 The J. Craig Venter Institute GCA_000310325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/325/GCF_000310325.1_ASM31032v1/ na na na haploid bacteria 2028637 2028637 35.500000 0 44 44 NCBI RefSeq GCF_000310325.1-RS_2026_01_04 2026-01-04 2060 1928 38 na GCF_000310365.1 PRJNA224116 SAMN00993335 ANCM00000000.1 na 1154776 1311 Streptococcus agalactiae FSL S3-586 strain=FSL S3-586 na latest Contig Major Full 2012-11-07 ASM31036v1 The J. Craig Venter Institute GCA_000310365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/365/GCF_000310365.1_ASM31036v1/ na na na haploid bacteria 2380716 2380716 35.500000 0 103 103 NCBI RefSeq GCF_000310365.1-RS_2026_01_12 2026-01-12 2513 2325 46 na GCF_000310385.1 PRJNA224116 SAMN00993315 ANEV00000000.1 na 1154882 1311 Streptococcus agalactiae MRI Z1-219 strain=MRI Z1-219 na latest Contig Major Full 2012-11-07 ASM31038v1 The J. Craig Venter Institute GCA_000310385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/385/GCF_000310385.1_ASM31038v1/ na na na haploid bacteria 2087624 2087624 35.000000 0 26 26 NCBI RefSeq GCF_000310385.1-RS_2026_01_02 2026-01-02 2128 1998 53 na GCF_000310405.1 PRJNA224116 SAMN00991126 ANEY00000000.1 na 1105236 1311 Streptococcus agalactiae str. Gottschalk 1002A strain=Gottschalk 1002A na latest Contig Major Full 2012-11-07 ASM31040v1 The J. Craig Venter Institute GCA_000310405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/405/GCF_000310405.1_ASM31040v1/ na na na haploid bacteria 2070913 2070913 35.500000 0 25 25 NCBI RefSeq GCF_000310405.1-RS_2026_01_02 2026-01-02 2093 1976 40 na GCF_000310425.1 PRJNA224116 SAMN00993328 ANCO00000000.1 na 1154786 1311 Streptococcus agalactiae FSL S3-251 strain=FSL S3-251 na latest Contig Major Full 2012-11-07 ASM31042v1 The J. Craig Venter Institute GCA_000310425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/425/GCF_000310425.1_ASM31042v1/ na na na haploid bacteria 2228453 2228453 35.500000 0 128 128 NCBI RefSeq GCF_000310425.1-RS_2026_01_13 2026-01-13 2394 2195 41 na GCF_000310445.1 PRJNA224116 SAMN00991076 ANCS00000000.1 na 1154798 1311 Streptococcus agalactiae FSL S3-102 strain=FSL S3-102 na latest Contig Major Full 2012-11-07 ASM31044v1 The J. Craig Venter Institute GCA_000310445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/445/GCF_000310445.1_ASM31044v1/ na na na haploid bacteria 1991868 1991868 35.500000 0 35 35 NCBI RefSeq GCF_000310445.1-RS_2026_01_07 2026-01-07 2019 1863 54 na GCF_000310465.1 PRJNA224116 SAMN00991071 ANCW00000000.1 na 1154804 1311 Streptococcus agalactiae FSL S3-005 strain=FSL S3-005 na latest Contig Major Full 2012-11-07 ASM31046v1 The J. Craig Venter Institute GCA_000310465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/465/GCF_000310465.1_ASM31046v1/ na na na haploid bacteria 2067386 2067386 35.500000 0 79 79 NCBI RefSeq GCF_000310465.1-RS_2026_01_06 2026-01-06 2144 1979 50 na GCF_000310485.1 PRJNA224116 SAMN00991062 ANDC00000000.1 na 1105256 1311 Streptococcus agalactiae CCUG 29782 strain=CCUG 29782 na latest Contig Major Full 2012-11-07 ASM31048v1 The J. Craig Venter Institute GCA_000310485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/485/GCF_000310485.1_ASM31048v1/ na na na haploid bacteria 2112860 2112860 35.500000 0 24 24 NCBI RefSeq GCF_000310485.1-RS_2026_02_17 2026-02-17 2132 2036 34 na GCF_000310505.1 PRJNA224116 SAMN00991102 ANDI00000000.1 na 1105262 1311 Streptococcus agalactiae CCUG 44074 strain=CCUG 44074 na latest Contig Major Full 2012-11-07 ASM31050v1 The J. Craig Venter Institute GCA_000310505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/505/GCF_000310505.1_ASM31050v1/ na na na haploid bacteria 2029541 2029541 35.000000 0 23 23 NCBI RefSeq GCF_000310505.1-RS_2026_01_02 2026-01-02 2055 1951 40 na GCF_000310525.1 PRJNA224116 SAMN00991094 ANDK00000000.1 na 1105264 1311 Streptococcus agalactiae CCUG 44110 strain=CCUG 44110 na latest Contig Major Full 2012-11-07 ASM31052v1 The J. Craig Venter Institute GCA_000310525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/525/GCF_000310525.1_ASM31052v1/ na na na haploid bacteria 2075876 2075876 35.500000 0 35 35 NCBI RefSeq GCF_000310525.1-RS_2026_01_03 2026-01-03 2115 2002 43 na GCF_000310545.1 PRJNA224116 SAMN00991124 ANDW00000000.1 na 1105276 1311 Streptococcus agalactiae LMG 15090 strain=LMG 15090 na latest Contig Major Full 2012-11-07 ASM31054v1 The J. Craig Venter Institute GCA_000310545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/545/GCF_000310545.1_ASM31054v1/ na na na haploid bacteria 2057237 2057237 35.000000 0 24 24 NCBI RefSeq GCF_000310545.1-RS_2026_01_02 2026-01-02 2096 1977 45 na GCF_000310565.1 PRJNA224116 SAMN00993654 ANCL00000000.1 na 876138 1311 Streptococcus agalactiae FSL S3-026 strain=FSL S3-026 na latest Contig Major Full 2012-11-07 ASM31056v1 The J. Craig Venter Institute GCA_000310565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/565/GCF_000310565.1_ASM31056v1/ na na na haploid bacteria 2254435 2254435 35.500000 0 125 125 NCBI RefSeq GCF_000310565.1-RS_2026_02_17 2026-02-17 2398 2200 40 na GCF_000310585.1 PRJNA224116 SAMN00991061 ANDA00000000.1 na 1105254 1311 Streptococcus agalactiae CCUG 28551 strain=CCUG 28551 na latest Contig Major Full 2012-11-07 ASM31058v1 The J. Craig Venter Institute GCA_000310585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/585/GCF_000310585.1_ASM31058v1/ na na na haploid bacteria 2085631 2085631 35.500000 0 113 113 NCBI RefSeq GCF_000310585.1-RS_2026_01_13 2026-01-13 2206 2061 45 na GCF_000310605.1 PRJNA224116 SAMN00991056 ANDE00000000.1 na 1105258 1311 Streptococcus agalactiae CCUG 37736 strain=CCUG 37736 na latest Contig Major Full 2012-11-07 ASM31060v1 The J. Craig Venter Institute GCA_000310605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/605/GCF_000310605.1_ASM31060v1/ na na na haploid bacteria 2048561 2048561 35.000000 0 40 40 NCBI RefSeq GCF_000310605.1-RS_2026_01_04 2026-01-04 2084 1946 40 na GCF_000310625.1 PRJNA224116 SAMN00991134 ANEF00000000.1 na 1105234 1311 Streptococcus agalactiae BSU174 strain=BSU174 na latest Contig Major Full 2012-11-07 ASM31062v1 The J. Craig Venter Institute GCA_000310625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/625/GCF_000310625.1_ASM31062v1/ na na na haploid bacteria 2002358 2002358 35.500000 0 33 33 NCBI RefSeq GCF_000310625.1-RS_2026_01_03 2026-01-03 2048 1939 47 na GCF_000310645.1 PRJNA224116 SAMN00993779 ANEG00000000.1 na 1154835 1311 Streptococcus agalactiae MRI Z1-198 strain=MRI Z1-198 na latest Contig Major Full 2012-11-07 ASM31064v1 The J. Craig Venter Institute GCA_000310645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/645/GCF_000310645.1_ASM31064v1/ na na na haploid bacteria 2049246 2049246 35.000000 0 25 25 NCBI RefSeq GCF_000310645.1-RS_2026_01_02 2026-01-02 2069 1970 37 na GCF_000310665.1 PRJNA224116 SAMN00993455 ANEH00000000.1 na 1154836 1311 Streptococcus agalactiae MRI Z1-199 strain=MRI Z1-199 na latest Contig Major Full 2012-11-07 ASM31066v1 The J. Craig Venter Institute GCA_000310665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/665/GCF_000310665.1_ASM31066v1/ na na na haploid bacteria 2024463 2024463 35.500000 0 25 25 NCBI RefSeq GCF_000310665.1-RS_2026_01_02 2026-01-02 2045 1926 42 na GCF_000310685.1 PRJNA224116 SAMN00993345 ANEM00000000.1 na 1154864 1311 Streptococcus agalactiae MRI Z1-022 strain=MRI Z1-022 na latest Contig Major Full 2012-11-07 ASM31068v1 The J. Craig Venter Institute GCA_000310685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/685/GCF_000310685.1_ASM31068v1/ na na na haploid bacteria 2225809 2225809 35.500000 0 76 76 NCBI RefSeq GCF_000310685.1-RS_2026_01_13 2026-01-13 2313 2159 47 na GCF_000310705.1 PRJNA224116 SAMN00993340 ANEP00000000.1 na 1154868 1311 Streptococcus agalactiae MRI Z1-035 strain=MRI Z1-035 na latest Contig Major Full 2012-11-07 ASM31070v1 The J. Craig Venter Institute GCA_000310705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/705/GCF_000310705.1_ASM31070v1/ na na na haploid bacteria 2135377 2135377 35.500000 0 43 43 NCBI RefSeq GCF_000310705.1-RS_2026_01_03 2026-01-03 2180 2067 40 na GCF_000310725.1 PRJNA224116 SAMN00991080 ANCQ00000000.1 na 1154796 1311 Streptococcus agalactiae FSL S3-090 strain=FSL S3-090 na latest Contig Major Full 2012-11-07 ASM31072v1 The J. Craig Venter Institute GCA_000310725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/725/GCF_000310725.1_ASM31072v1/ na na na haploid bacteria 2097151 2097151 35.500000 0 27 27 NCBI RefSeq GCF_000310725.1-RS_2026_01_02 2026-01-02 2138 2024 50 na GCF_000310745.1 PRJNA224116 SAMN00991078 ANCR00000000.1 na 1154797 1311 Streptococcus agalactiae FSL S3-014 strain=FSL S3-014 na latest Contig Major Full 2012-11-07 ASM31074v1 The J. Craig Venter Institute GCA_000310745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/745/GCF_000310745.1_ASM31074v1/ na na na haploid bacteria 2163183 2163183 35.000000 0 25 25 NCBI RefSeq GCF_000310745.1-RS_2026_01_02 2026-01-02 2191 2058 52 na GCF_000310765.1 PRJNA224116 SAMN00991098 ANDO00000000.1 na 1105268 1311 Streptococcus agalactiae CCUG 47293 strain=CCUG 47293 na latest Contig Major Full 2012-11-07 ASM31076v1 The J. Craig Venter Institute GCA_000310765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/765/GCF_000310765.1_ASM31076v1/ na na na haploid bacteria 2012857 2012857 35.000000 0 24 24 NCBI RefSeq GCF_000310765.1-RS_2026_01_02 2026-01-02 2030 1919 44 na GCF_000310785.1 PRJNA224116 SAMN00991089 ANDR00000000.1 na 1105271 1311 Streptococcus agalactiae CCUG 49100 strain=CCUG 49100 na latest Contig Major Full 2012-11-07 ASM31078v1 The J. Craig Venter Institute GCA_000310785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/785/GCF_000310785.1_ASM31078v1/ na na na haploid bacteria 2091582 2091582 35.500000 0 21 21 NCBI RefSeq GCF_000310785.1-RS_2026_01_02 2026-01-02 2123 2018 33 na GCF_000310805.1 PRJNA224116 SAMN00991091 ANDS00000000.1 na 1105272 1311 Streptococcus agalactiae LMG 15081 strain=LMG 15081 na latest Contig Major Full 2012-11-07 ASM31080v1 The J. Craig Venter Institute GCA_000310805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/805/GCF_000310805.1_ASM31080v1/ na na na haploid bacteria 2040516 2040516 35.000000 0 16 16 NCBI RefSeq GCF_000310805.1-RS_2026_01_02 2026-01-02 2049 1929 47 na GCF_000310825.1 PRJNA224116 SAMN00991092 ANDT00000000.1 na 1105273 1311 Streptococcus agalactiae LMG 15083 strain=LMG 15083 na latest Contig Major Full 2012-11-07 ASM31082v1 The J. Craig Venter Institute GCA_000310825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/825/GCF_000310825.1_ASM31082v1/ na na na haploid bacteria 2080295 2080295 35.500000 0 30 30 NCBI RefSeq GCF_000310825.1-RS_2026_02_17 2026-02-17 2121 2006 43 na GCF_000310845.1 PRJNA224116 SAMN00991093 ANDU00000000.1 na 1105274 1311 Streptococcus agalactiae LMG 15084 strain=LMG 15084 na latest Contig Major Full 2012-11-07 ASM31084v1 The J. Craig Venter Institute GCA_000310845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/845/GCF_000310845.1_ASM31084v1/ na na na haploid bacteria 2072580 2072580 35.500000 0 23 23 NCBI RefSeq GCF_000310845.1-RS_2026_01_02 2026-01-02 2105 2003 49 na GCF_000310865.1 PRJNA224116 SAMN00991119 ANDX00000000.1 na 1105277 1311 Streptococcus agalactiae BSU252 strain=BSU252 na latest Contig Major Full 2012-11-07 ASM31086v1 The J. Craig Venter Institute GCA_000310865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/865/GCF_000310865.1_ASM31086v1/ na na na haploid bacteria 1986914 1986914 35.000000 0 19 19 NCBI RefSeq GCF_000310865.1-RS_2026_01_03 2026-01-03 2011 1904 39 na GCF_000310885.1 PRJNA224116 SAMN00991116 ANEA00000000.1 na 1105280 1311 Streptococcus agalactiae BSU447 strain=BSU447 na latest Contig Major Full 2012-11-07 ASM31088v1 The J. Craig Venter Institute GCA_000310885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/885/GCF_000310885.1_ASM31088v1/ na na na haploid bacteria 2136214 2136214 35.500000 0 45 45 NCBI RefSeq GCF_000310885.1-RS_2026_01_05 2026-01-05 2179 2026 50 na GCF_000310905.1 PRJNA224116 SAMN00991145 ANFA00000000.1 na 1105239 1311 Streptococcus agalactiae str. Gottschalk 2864 strain=Gottschalk 2864 na latest Contig Major Full 2012-11-07 ASM31090v1 The J. Craig Venter Institute GCA_000310905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/905/GCF_000310905.1_ASM31090v1/ na na na haploid bacteria 2071721 2071721 35.500000 0 41 41 NCBI RefSeq GCF_000310905.1-RS_2026_01_03 2026-01-03 2096 1969 47 na GCF_000310925.1 PRJNA224116 SAMN00993337 ANEQ00000000.1 na 1154871 1311 Streptococcus agalactiae MRI Z1-048 strain=MRI Z1-048 na latest Contig Major Full 2012-11-07 ASM31092v1 The J. Craig Venter Institute GCA_000310925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/925/GCF_000310925.1_ASM31092v1/ na na na haploid bacteria 2023933 2023933 35.500000 0 135 135 NCBI RefSeq GCF_000310925.1-RS_2026_01_13 2026-01-13 2137 2003 33 na GCF_000310945.1 PRJNA224116 SAMN00993338 ANEO00000000.1 na 1154867 1311 Streptococcus agalactiae MRI Z1-025 strain=MRI Z1-025 na latest Contig Major Full 2012-11-07 ASM31094v1 The J. Craig Venter Institute GCA_000310945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/945/GCF_000310945.1_ASM31094v1/ na na na haploid bacteria 2116782 2116782 35.500000 0 26 26 NCBI RefSeq GCF_000310945.1-RS_2026_01_02 2026-01-02 2147 2013 48 na GCF_000310965.1 PRJNA224116 SAMN00991140 ANFC00000000.1 na 1105241 1311 Streptococcus agalactiae str. Gottschalk 998A strain=Gottschalk 998A na latest Contig Major Full 2012-11-07 ASM31096v1 The J. Craig Venter Institute GCA_000310965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/965/GCF_000310965.1_ASM31096v1/ na na na haploid bacteria 2114409 2114409 35.000000 0 41 41 NCBI RefSeq GCF_000310965.1-RS_2026_01_03 2026-01-03 2163 2045 40 na GCF_000310985.1 PRJNA224116 SAMN00991139 ANFD00000000.1 na 1105242 1311 Streptococcus agalactiae str. Gottschalk 999B strain=Gottschalk 999B na latest Contig Major Full 2012-11-07 ASM31098v1 The J. Craig Venter Institute GCA_000310985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/985/GCF_000310985.1_ASM31098v1/ na na na haploid bacteria 2129554 2129554 35.500000 0 28 28 NCBI RefSeq GCF_000310985.1-RS_2026_01_02 2026-01-02 2184 2062 47 na GCF_000311005.1 PRJNA224116 SAMN00991111 ANDG00000000.1 na 1105260 1311 Streptococcus agalactiae CCUG 37740 strain=CCUG 37740 na latest Contig Major Full 2012-11-07 ASM31100v1 The J. Craig Venter Institute GCA_000311005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/005/GCF_000311005.1_ASM31100v1/ na na na haploid bacteria 2128615 2128615 35.000000 0 41 41 NCBI RefSeq GCF_000311005.1-RS_2026_01_04 2026-01-04 2158 2026 40 na GCF_000311025.1 PRJNA224116 SAMN00993660 ANEK00000000.1 na 1154853 1311 Streptococcus agalactiae STIR-CD-25 strain=STIR-CD-25 na latest Contig Major Full 2012-11-07 ASM31102v1 The J. Craig Venter Institute GCA_000311025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/025/GCF_000311025.1_ASM31102v1/ na na na haploid bacteria 2054275 2054275 35.000000 0 35 35 NCBI RefSeq GCF_000311025.1-RS_2026_01_12 2026-01-12 2107 1981 46 na GCF_000311045.1 PRJNA224116 SAMN00993333 ANES00000000.1 na 1154873 1311 Streptococcus agalactiae MRI Z1-209 strain=MRI Z1-209 na latest Contig Major Full 2012-11-07 ASM31104v1 The J. Craig Venter Institute GCA_000311045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/045/GCF_000311045.1_ASM31104v1/ na na na haploid bacteria 2103940 2103940 35.500000 0 59 59 NCBI RefSeq GCF_000311045.1-RS_2026_01_04 2026-01-04 2156 2015 41 na GCF_000311065.1 PRJNA224116 SAMN02436186 ANFE00000000.1 na 1105235 1311 Streptococcus agalactiae str. Gottschalk 19247 strain=Gottschalk 19247 na latest Contig Major Full 2012-11-07 ASM31106v1 The J. Craig Venter Institute GCA_000311065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/065/GCF_000311065.1_ASM31106v1/ na na na haploid bacteria 1984959 1984959 35.000000 0 27 27 NCBI RefSeq GCF_000311065.1-RS_2026_01_03 2026-01-03 2007 1890 39 na GCF_000311085.1 PRJNA224116 SAMN00991144 ANEZ00000000.1 na 1105238 1311 Streptococcus agalactiae str. Gottschalk 13227 strain=Gottschalk 13227 na latest Contig Major Full 2012-11-07 ASM31108v1 The J. Craig Venter Institute GCA_000311085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/085/GCF_000311085.1_ASM31108v1/ na na na haploid bacteria 2122390 2122390 35.500000 0 45 45 NCBI RefSeq GCF_000311085.1-RS_2026_01_03 2026-01-03 2188 2059 44 na GCF_000311105.1 PRJNA224116 SAMN00993313 ANCN00000000.1 na 1154782 1311 Streptococcus agalactiae FSL S3-105 strain=FSL S3-105 na latest Contig Major Full 2012-11-07 ASM31110v1 The J. Craig Venter Institute GCA_000311105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/105/GCF_000311105.1_ASM31110v1/ na na na haploid bacteria 2236748 2236748 35.500000 0 89 89 NCBI RefSeq GCF_000311105.1-RS_2025_08_25 2025-08-25 2330 2151 40 na GCF_000311125.1 PRJNA224116 SAMN00991079 ANCT00000000.1 na 1154799 1311 Streptococcus agalactiae FSL S3-442 strain=FSL S3-442 na latest Contig Major Full 2012-11-07 ASM31112v1 The J. Craig Venter Institute GCA_000311125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/125/GCF_000311125.1_ASM31112v1/ na na na haploid bacteria 2045351 2045351 35.500000 0 124 124 NCBI RefSeq GCF_000311125.1-RS_2026_01_13 2026-01-13 2112 1978 42 na GCF_000311145.1 PRJNA224116 SAMN00991075 ANCV00000000.1 na 1154802 1311 Streptococcus agalactiae FSL S3-268 strain=FSL S3-268 na latest Contig Major Full 2012-11-07 ASM31114v1 The J. Craig Venter Institute GCA_000311145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/145/GCF_000311145.1_ASM31114v1/ na na na haploid bacteria 2053859 2053859 35.500000 0 74 74 NCBI RefSeq GCF_000311145.1-RS_2026_01_04 2026-01-04 2118 1976 43 na GCF_000311165.1 PRJNA224116 SAMN00991074 ANCY00000000.1 na 1105252 1311 Streptococcus agalactiae CCUG 91 strain=CCUG 91 na latest Contig Major Full 2012-11-07 ASM31116v1 The J. Craig Venter Institute GCA_000311165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/165/GCF_000311165.1_ASM31116v1/ na na na haploid bacteria 2132898 2132898 35.500000 0 25 25 NCBI RefSeq GCF_000311165.1-RS_2026_01_02 2026-01-02 2192 2083 47 na GCF_000311185.1 PRJNA224116 SAMN00991066 ANCZ00000000.1 na 1105253 1311 Streptococcus agalactiae CCUG 17336 strain=CCUG 17336 na latest Contig Major Full 2012-11-07 ASM31118v1 The J. Craig Venter Institute GCA_000311185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/185/GCF_000311185.1_ASM31118v1/ na na na haploid bacteria 2044173 2044173 35.500000 0 35 35 NCBI RefSeq GCF_000311185.1-RS_2026_01_05 2026-01-05 2086 1942 38 na GCF_000311205.1 PRJNA224116 SAMN00991105 ANDH00000000.1 na 1105261 1311 Streptococcus agalactiae CCUG 44050 strain=CCUG 44050 na latest Contig Major Full 2012-11-07 ASM31120v1 The J. Craig Venter Institute GCA_000311205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/205/GCF_000311205.1_ASM31120v1/ na na na haploid bacteria 2116007 2116007 35.500000 0 86 86 NCBI RefSeq GCF_000311205.1-RS_2026_01_04 2026-01-04 2172 2033 40 na GCF_000311225.1 PRJNA224116 SAMN00991101 ANDJ00000000.1 na 1105263 1311 Streptococcus agalactiae CCUG 44104 strain=CCUG 44104 na latest Contig Major Full 2012-11-07 ASM31122v1 The J. Craig Venter Institute GCA_000311225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/225/GCF_000311225.1_ASM31122v1/ annotation fails completeness check na na haploid bacteria 2122058 2122058 35.500000 0 173 173 NCBI RefSeq GCF_000311225.1-RS_2026_01_13 2026-01-13 2219 2056 33 na GCF_000311245.1 PRJNA224116 SAMN00991097 ANDM00000000.1 na 1105266 1311 Streptococcus agalactiae CCUG 44186 strain=CCUG 44186 na latest Contig Major Full 2012-11-07 ASM31124v1 The J. Craig Venter Institute GCA_000311245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/245/GCF_000311245.1_ASM31124v1/ na na na haploid bacteria 2125962 2125962 35.500000 0 46 46 NCBI RefSeq GCF_000311245.1-RS_2026_01_05 2026-01-05 2157 1993 57 na GCF_000311265.1 PRJNA224116 SAMN00991086 ANDV00000000.1 na 1105275 1311 Streptococcus agalactiae LMG 15089 strain=LMG 15089 na latest Contig Major Full 2012-11-07 ASM31126v1 The J. Craig Venter Institute GCA_000311265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/265/GCF_000311265.1_ASM31126v1/ na na na haploid bacteria 2181880 2181880 35.500000 0 42 42 NCBI RefSeq GCF_000311265.1-RS_2026_01_03 2026-01-03 2240 2108 51 na GCF_000311305.1 PRJNA224116 SAMN00993325 ANET00000000.1 na 1154878 1311 Streptococcus agalactiae MRI Z1-215 strain=MRI Z1-215 na latest Contig Major Full 2012-11-07 ASM31130v1 The J. Craig Venter Institute GCA_000311305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/305/GCF_000311305.1_ASM31130v1/ na na na haploid bacteria 2141124 2141124 35.500000 0 28 28 NCBI RefSeq GCF_000311305.1-RS_2026_01_03 2026-01-03 2168 2022 46 na GCF_000311325.1 PRJNA224116 SAMN00993316 ANEU00000000.1 na 1154880 1311 Streptococcus agalactiae MRI Z1-217 strain=MRI Z1-217 na latest Contig Major Full 2012-11-07 ASM31132v1 The J. Craig Venter Institute GCA_000311325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/325/GCF_000311325.1_ASM31132v1/ na na na haploid bacteria 2301685 2301685 35.500000 0 104 104 NCBI RefSeq GCF_000311325.1-RS_2026_01_12 2026-01-12 2431 2241 37 na GCF_000311365.1 PRJNA224116 SAMN00991138 ANEC00000000.1 na 1105231 1311 Streptococcus agalactiae BSU260 strain=BSU260 na latest Contig Major Full 2012-11-07 ASM31136v1 The J. Craig Venter Institute GCA_000311365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/365/GCF_000311365.1_ASM31136v1/ na na na haploid bacteria 2177839 2177839 35.500000 0 31 31 NCBI RefSeq GCF_000311365.1-RS_2026_01_02 2026-01-02 2230 2120 39 na GCF_000311385.1 PRJNA224116 SAMN00991131 ANED00000000.1 na 1105232 1311 Streptococcus agalactiae BSU451 strain=BSU451 na latest Contig Major Full 2012-11-07 ASM31138v1 The J. Craig Venter Institute GCA_000311385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/385/GCF_000311385.1_ASM31138v1/ na na na haploid bacteria 2087635 2087635 35.500000 0 16 16 NCBI RefSeq GCF_000311385.1-RS_2026_01_02 2026-01-02 2122 2020 43 na GCF_000311405.1 PRJNA224116 SAMN00991136 ANEE00000000.1 na 1105233 1311 Streptococcus agalactiae BSU133 strain=BSU133 na latest Contig Major Full 2012-11-07 ASM31140v1 The J. Craig Venter Institute GCA_000311405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/405/GCF_000311405.1_ASM31140v1/ na na na haploid bacteria 2033924 2033924 35.500000 0 25 25 NCBI RefSeq GCF_000311405.1-RS_2026_01_02 2026-01-02 2072 1964 42 na GCF_000311425.1 PRJNA224116 SAMN00993342 ANEN00000000.1 na 1154865 1311 Streptococcus agalactiae MRI Z1-023 strain=MRI Z1-023 na latest Contig Major Full 2012-11-07 ASM31142v1 The J. Craig Venter Institute GCA_000311425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/425/GCF_000311425.1_ASM31142v1/ na na na haploid bacteria 2097920 2097920 35.500000 0 23 23 NCBI RefSeq GCF_000311425.1-RS_2026_01_12 2026-01-12 2147 2034 49 na GCF_000311445.1 PRJNA224116 SAMN00991143 ANFB00000000.1 na 1105240 1311 Streptococcus agalactiae str. Gottschalk 31825 strain=Gottschalk 31825 na latest Contig Major Full 2012-11-07 ASM31144v1 The J. Craig Venter Institute GCA_000311445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/445/GCF_000311445.1_ASM31144v1/ na na na haploid bacteria 2043732 2043732 35.500000 0 27 27 NCBI RefSeq GCF_000311445.1-RS_2026_01_02 2026-01-02 2061 1947 45 na GCF_000311465.1 PRJNA224116 SAMN00991082 ANCP00000000.1 na 1154794 1311 Streptococcus agalactiae FSL S3-023 strain=FSL S3-023 na latest Contig Major Full 2012-11-07 ASM31146v1 The J. Craig Venter Institute GCA_000311465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/465/GCF_000311465.1_ASM31146v1/ na na na haploid bacteria 2041458 2041458 35.500000 0 20 20 NCBI RefSeq GCF_000311465.1-RS_2026_01_02 2026-01-02 2060 1945 42 na GCF_000311485.1 PRJNA224116 SAMN00991069 ANCU00000000.1 na 1154801 1311 Streptococcus agalactiae FSL S3-137 strain=FSL S3-137 na latest Contig Major Full 2012-11-07 ASM31148v1 The J. Craig Venter Institute GCA_000311485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/485/GCF_000311485.1_ASM31148v1/ na na na haploid bacteria 2056996 2056996 35.000000 0 22 22 NCBI RefSeq GCF_000311485.1-RS_2026_01_02 2026-01-02 2090 1982 41 na GCF_000311505.1 PRJNA224116 SAMN00991072 ANCX00000000.1 na 1154805 1311 Streptococcus agalactiae FSL S3-001 strain=FSL S3-001 na latest Contig Major Full 2012-11-07 ASM31150v1 The J. Craig Venter Institute GCA_000311505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/505/GCF_000311505.1_ASM31150v1/ na na na haploid bacteria 2058646 2058646 35.500000 0 22 22 NCBI RefSeq GCF_000311505.1-RS_2026_01_02 2026-01-02 2080 1963 42 na GCF_000311525.1 PRJNA224116 SAMN00991064 ANDB00000000.1 na 1105255 1311 Streptococcus agalactiae CCUG 29376 strain=CCUG 29376 na latest Contig Major Full 2012-11-07 ASM31152v1 The J. Craig Venter Institute GCA_000311525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/525/GCF_000311525.1_ASM31152v1/ na na na haploid bacteria 2187322 2187322 35.500000 0 24 24 NCBI RefSeq GCF_000311525.1-RS_2026_01_02 2026-01-02 2234 2128 35 na GCF_000311545.1 PRJNA224116 SAMN00991065 ANDD00000000.1 na 1105257 1311 Streptococcus agalactiae CCUG 30636 strain=CCUG 30636 na latest Contig Major Full 2012-11-07 ASM31154v1 The J. Craig Venter Institute GCA_000311545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/545/GCF_000311545.1_ASM31154v1/ na na na haploid bacteria 2056803 2056803 35.500000 0 22 22 NCBI RefSeq GCF_000311545.1-RS_2026_01_02 2026-01-02 2076 1958 46 na GCF_000311565.1 PRJNA224116 SAMN00991110 ANDF00000000.1 na 1105259 1311 Streptococcus agalactiae CCUG 37739 strain=CCUG 37739 na latest Contig Major Full 2012-11-07 ASM31156v1 The J. Craig Venter Institute GCA_000311565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/565/GCF_000311565.1_ASM31156v1/ na na na haploid bacteria 1983199 1983199 35.000000 0 22 22 NCBI RefSeq GCF_000311565.1-RS_2026_01_07 2026-01-07 2001 1887 46 na GCF_000311585.1 PRJNA224116 SAMN00991090 ANDL00000000.1 na 1105265 1311 Streptococcus agalactiae CCUG 44140 strain=CCUG 44140 na latest Contig Major Full 2012-11-07 ASM31158v1 The J. Craig Venter Institute GCA_000311585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/585/GCF_000311585.1_ASM31158v1/ na na na haploid bacteria 2041112 2041112 35.000000 0 22 22 NCBI RefSeq GCF_000311585.1-RS_2026_01_02 2026-01-02 2064 1944 43 na GCF_000311605.1 PRJNA224116 SAMN00991099 ANDN00000000.1 na 1105267 1311 Streptococcus agalactiae CCUG 45061 strain=CCUG 45061 na latest Contig Major Full 2012-11-07 ASM31160v1 The J. Craig Venter Institute GCA_000311605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/605/GCF_000311605.1_ASM31160v1/ na na na haploid bacteria 2182376 2182376 35.500000 0 41 41 NCBI RefSeq GCF_000311605.1-RS_2026_01_04 2026-01-04 2215 2069 49 na GCF_000311625.1 PRJNA224116 SAMN00991095 ANDP00000000.1 na 1105269 1311 Streptococcus agalactiae CCUG 49072 strain=CCUG 49072 na latest Contig Major Full 2012-11-07 ASM31162v1 The J. Craig Venter Institute GCA_000311625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/625/GCF_000311625.1_ASM31162v1/ na na na haploid bacteria 2057714 2057714 35.500000 0 21 21 NCBI RefSeq GCF_000311625.1-RS_2026_01_02 2026-01-02 2074 1963 35 na GCF_000311645.1 PRJNA224116 SAMN00991088 ANDQ00000000.1 na 1105270 1311 Streptococcus agalactiae CCUG 49086 strain=CCUG 49086 na latest Contig Major Full 2012-11-07 ASM31164v1 The J. Craig Venter Institute GCA_000311645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/645/GCF_000311645.1_ASM31164v1/ na na na haploid bacteria 2077223 2077223 35.500000 0 32 32 NCBI RefSeq GCF_000311645.1-RS_2026_01_05 2026-01-05 2120 1973 44 na GCF_000311665.1 PRJNA224116 SAMN00991120 ANDY00000000.1 na 1105278 1311 Streptococcus agalactiae BSU454 strain=BSU454 na latest Contig Major Full 2012-11-07 ASM31166v1 The J. Craig Venter Institute GCA_000311665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/665/GCF_000311665.1_ASM31166v1/ na na na haploid bacteria 2094702 2094702 35.500000 0 28 28 NCBI RefSeq GCF_000311665.1-RS_2026_01_02 2026-01-02 2103 1999 42 na GCF_000311685.1 PRJNA224116 SAMN00991117 ANDZ00000000.1 na 1105279 1311 Streptococcus agalactiae BSU248 strain=BSU248 na latest Contig Major Full 2012-11-07 SAG95_v1 The J. Craig Venter Institute GCA_000311685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/685/GCF_000311685.1_SAG95_v1/ na na na haploid bacteria 2107120 2107120 35.000000 0 21 21 NCBI RefSeq GCF_000311685.1-RS_2026_01_02 2026-01-02 2134 2021 40 na GCF_000311705.1 PRJNA224116 SAMN00991114 ANEB00000000.1 na 1105281 1311 Streptococcus agalactiae BSU253 strain=BSU253 na latest Contig Major Full 2012-11-07 ASM31170v1 The J. Craig Venter Institute GCA_000311705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/705/GCF_000311705.1_ASM31170v1/ na na na haploid bacteria 1924426 1924426 35.000000 0 21 21 NCBI RefSeq GCF_000311705.1-RS_2026_01_07 2026-01-07 1915 1809 41 na GCF_000311725.1 PRJNA224116 SAMEA2272328 CAHJ00000000.1 reference genome 1034347 1287657 Robertmurraya massiliosenegalensis JC6 strain=JC6 na latest Scaffold Major Full 2012-08-16 ASM31172v1 laboratoire URMITE GCA_000311725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/725/GCF_000311725.1_ASM31172v1/ na assembly from type material na haploid bacteria 4967913 4895941 37.500000 0 24 102 NCBI RefSeq GCF_000311725.1-RS_2025_12_11 2025-12-11 4950 4791 76 na GCF_000311745.1 PRJNA224116 SAMEA2272036 CAGV00000000.1 na 1118056 1287640 Anaerococcus obesiensis ph10 strain=ph10 na latest Scaffold Major Full 2012-08-16 ASM31174v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/745/GCF_000311745.1_ASM31174v1/ na assembly from type material na haploid bacteria 2037171 2015695 29.000000 0 5 32 NCBI RefSeq GCF_000311745.1-RS_2026_04_23 2026-04-23 2058 1927 52 na GCF_000311785.1 PRJNA224116 SAMEA2272187 CAGW00000000.1 reference genome 1118054 1118054 Brevibacillus massiliensis strain=phR na latest Scaffold Major Full 2012-08-16 ASM31178v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/785/GCF_000311785.1_ASM31178v1/ na assembly from type material na haploid bacteria 5060362 4952787 53.000000 0 37 132 NCBI RefSeq GCF_000311785.1-RS_2026_05_01 2026-05-01 5164 4909 87 na GCF_000311825.1 PRJNA224116 SAMEA2271924 CAGX00000000.1 reference genome 1118057 1465756 Peptoniphilus grossensis ph5 strain=ph5 na latest Scaffold Major Full 2012-08-16 ASM31182v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/825/GCF_000311825.1_ASM31182v1/ na assembly from type material na haploid bacteria 2101866 2029837 34.000000 0 8 77 NCBI RefSeq GCF_000311825.1-RS_2026_05_01 2026-05-01 2038 1970 33 na GCF_000311845.1 PRJNA224116 SAMEA2272149 CAGZ00000000.1 reference genome 1118060 1472761 Enorma massiliensis phI na phI latest Scaffold Major Full 2012-08-16 ASM31184v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/845/GCF_000311845.1_ASM31184v1/ na assembly from type material na haploid bacteria 2280503 2263008 62.000000 0 3 35 NCBI RefSeq GCF_000311845.1-RS_2026_03_30 2026-03-30 1946 1866 54 na GCF_000311865.1 PRJNA224116 SAMEA2272531 CAHB00000000.1 reference genome 1118062 1472765 Peptoniphilus obesi ph1 strain=ph1 na latest Scaffold Major Full 2012-08-16 ASM31186v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/865/GCF_000311865.1_ASM31186v1/ na assembly from type material na haploid bacteria 1773998 1747868 30.000000 0 5 33 NCBI RefSeq GCF_000311865.1-RS_2026_05_01 2026-05-01 1716 1654 32 na GCF_000311885.1 PRJNA224116 SAMN02403946 AMQL00000000.1 na 1159617 632 Yersinia pestis INS strain=INS na latest Contig Major Full 2012-11-09 ASM31188v1 Instituto Nacional de Salud GCA_000311885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/885/GCF_000311885.1_ASM31188v1/ na na na haploid bacteria 4651700 4651700 47.500000 0 18 18 NCBI RefSeq GCF_000311885.1-RS_2026_03_21 2026-03-21 4210 3917 100 23469360 GCF_000311905.1 PRJNA224116 SAMN02470056 AMQK00000000.1 na 1206782 774 Bartonella bacilliformis INS strain=INS na latest Contig Major Full 2012-11-09 ASM31190v1 Instituto Nacional de Salud GCA_000311905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/905/GCF_000311905.1_ASM31190v1/ na na na haploid bacteria 1444107 1444107 38.500000 0 20 20 NCBI RefSeq GCF_000311905.1-RS_2026_04_23 2026-04-23 1269 1165 54 23409255 GCF_000311945.1 PRJNA224116 SAMN01737618 AMQW00000000.1 na 1203258 47715 Lacticaseibacillus rhamnosus LRHMDP2 strain=LRHMDP2 na latest Contig Major Full 2012-11-09 ASM31194v1 Westmead Centre for Oral Health and Westmead Millennium Institute, Westmead Hostpital GCA_000311945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/945/GCF_000311945.1_ASM31194v1/ na na na haploid bacteria 2911110 2911110 46.500000 0 50 50 NCBI RefSeq GCF_000311945.1-RS_2026_01_27 2026-01-27 2779 2678 62 23405363 GCF_000311965.1 PRJNA224116 SAMN01757838 AMQX00000000.1 na 1203259 47715 Lacticaseibacillus rhamnosus LRHMDP3 strain=LRHMDP3 na latest Contig Major Full 2012-11-09 ASM31196v1 Westmead Centre for Oral Health and Westmead Millennium Institute, Westmead Hostpital GCA_000311965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/965/GCF_000311965.1_ASM31196v1/ na na na haploid bacteria 2911934 2911934 46.500000 0 47 47 NCBI RefSeq GCF_000311965.1-RS_2026_01_27 2026-01-27 2773 2668 66 23405363 GCF_000311985.1 PRJNA224116 SAMEA2272041 CAHC00000000.1 reference genome 1118059 1472764 Kallipyga massiliensis ph2 strain=ph2 na latest Scaffold Major Full 2012-08-16 ASM31198v1 URMITE CNRS UMR 6236 IRD 198 GCA_000311985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/311/985/GCF_000311985.1_ASM31198v1/ na assembly from type material na haploid bacteria 1770670 1751953 51.500000 0 3 22 NCBI RefSeq GCF_000311985.1-RS_2026_05_01 2026-05-01 1649 1551 54 na GCF_000312005.1 PRJNA224116 SAMEA2272357 CAHD00000000.1 reference genome 1095767 1465811 Cellulomonas massiliensis JC225 strain=JC225 na latest Scaffold Major Full 2012-08-16 ASM31200v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/005/GCF_000312005.1_ASM31200v1/ na assembly from type material na haploid bacteria 3410512 3245876 75.000000 0 7 250 NCBI RefSeq GCF_000312005.1-RS_2025_08_21 2025-08-21 3209 3083 52 na GCF_000312025.1 PRJNA224116 SAMEA2272625 CAHE00000000.1 reference genome 1095770 1268254 Peptoniphilus timonensis JC401 strain=JC401 na latest Scaffold Major Full 2012-08-16 ASM31202v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/025/GCF_000312025.1_ASM31202v1/ na assembly from type material na haploid bacteria 1758598 1726703 30.500000 0 7 100 NCBI RefSeq GCF_000312025.1-RS_2026_05_01 2026-05-01 1860 1678 26 na GCF_000312045.1 PRJNA224116 SAMEA2271952 CAHF00000000.1 reference genome 1095769 1465823 Noviherbaspirillum massiliense JC206 strain=JC206 na latest Scaffold Major Full 2012-08-16 ASM31204v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/045/GCF_000312045.1_ASM31204v1/ na assembly from type material na haploid bacteria 4188269 4171485 60.000000 0 3 28 NCBI RefSeq GCF_000312045.1-RS_2025_12_09 2025-12-09 3909 3825 55 na GCF_000312105.1 PRJNA224116 SAMEA2272444 CAHG00000000.1 reference genome 1033730 1464554 Aeromicrobium massiliense JC14 strain=JC14 na latest Scaffold Major Full 2012-08-16 ASM31210v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/105/GCF_000312105.1_ASM31210v1/ na assembly from type material na haploid bacteria 3322119 3314828 72.500000 0 5 18 NCBI RefSeq GCF_000312105.1-RS_2026_05_01 2026-05-01 3354 3294 54 na GCF_000312125.1 PRJNA224116 SAMEA2271956 CAHH00000000.1 reference genome 1095772 1465825 Timonella senegalensis JC301 na JC301 latest Scaffold Major Full 2012-08-16 ASM31212v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/125/GCF_000312125.1_ASM31212v1/ na assembly from type material na haploid bacteria 3009940 2986605 61.500000 0 6 78 NCBI RefSeq GCF_000312125.1-RS_2025_12_10 2025-12-10 2737 2618 73 na GCF_000312145.1 PRJNA224116 SAMEA2272561 CAHI00000000.1 na 1033732 1288121 Alistipes senegalensis JC50 strain=JC50 na latest Scaffold Major Full 2012-08-16 ASM31214v1 URMITE CNRS UMR 6236 IRD 198 GCA_000312145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/145/GCF_000312145.1_ASM31214v1/ na assembly from type material na haploid bacteria 4017609 3985109 58.500000 0 6 41 NCBI RefSeq GCF_000312145.1-RS_2026_01_08 2026-01-08 3225 3121 54 na GCF_000312165.1 PRJNA224116 SAMEA2272067 CAII00000000.1 na 1160286 1126 Microcystis aeruginosa PCC 9717 strain=PCC 9717 na latest Scaffold Major Full 2012-08-06 ASM31216v1 Genoscope CEA GCA_000312165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/165/GCF_000312165.1_ASM31216v1/ na na na haploid bacteria 5300338 5211238 43.000000 0 264 892 NCBI RefSeq GCF_000312165.1-RS_2026_01_07 2026-01-07 5254 4789 48 na GCF_000312185.1 PRJNA224116 SAMEA2272253 CAIJ00000000.1 na 1160281 1126 Microcystis aeruginosa PCC 9443 strain=PCC 9443 na latest Scaffold Major Full 2012-08-06 ASM31218v1 Genoscope CEA GCA_000312185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/185/GCF_000312185.1_ASM31218v1/ na na na haploid bacteria 5185041 5109141 43.000000 0 221 760 NCBI RefSeq GCF_000312185.1-RS_2026_01_07 2026-01-07 5165 4756 48 na GCF_000312205.1 PRJNA224116 SAMEA2272182 CAIK00000000.1 na 213618 1126 Microcystis aeruginosa PCC 7941 strain=7941 na latest Scaffold Major Full 2012-08-06 ASM31220v1 Genoscope CEA GCA_000312205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/205/GCF_000312205.1_ASM31220v1/ na na na haploid bacteria 4801899 4758699 42.500000 0 77 433 NCBI RefSeq GCF_000312205.1-RS_2025_03_12 2025-03-12 4668 4348 47 na GCF_000312225.1 PRJNA224116 SAMEA2272564 CAIM00000000.1 na 1160283 1126 Microcystis aeruginosa PCC 9807 strain=PCC 9807 na latest Scaffold Major Full 2012-08-06 ASM31222v1 Genoscope CEA GCA_000312225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/225/GCF_000312225.1_ASM31222v1/ na na na haploid bacteria 5155707 5077607 42.500000 0 267 782 NCBI RefSeq GCF_000312225.1-RS_2026_01_07 2026-01-07 5122 4728 48 na GCF_000312245.1 PRJNA224116 SAMEA2272072 CAIN00000000.1 na 1160284 1126 Microcystis aeruginosa PCC 9808 strain=PCC 9808 na latest Scaffold Major Full 2012-08-06 ASM31224v1 Genoscope CEA GCA_000312245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/245/GCF_000312245.1_ASM31224v1/ na na na haploid bacteria 5051045 5003245 42.500000 0 141 479 NCBI RefSeq GCF_000312245.1-RS_2026_01_07 2026-01-07 5030 4626 47 na GCF_000312265.1 PRJNA224116 SAMEA2272447 CAIO00000000.1 na 1160285 1126 Microcystis aeruginosa PCC 9809 strain=PCC 9809 na latest Scaffold Major Full 2012-08-06 ASM31226v1 Genoscope CEA GCA_000312265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/265/GCF_000312265.1_ASM31226v1/ na na na haploid bacteria 5011016 4930216 43.000000 0 303 809 NCBI RefSeq GCF_000312265.1-RS_2026_01_07 2026-01-07 5010 4628 48 na GCF_000312285.1 PRJNA224116 SAMEA2271961 CAIQ00000000.1 na 721123 1126 Microcystis aeruginosa PCC 9701 strain=PCC 9701 na latest Scaffold Major Full 2012-08-06 ASM31228v1 Genoscope CEA GCA_000312285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/285/GCF_000312285.1_ASM31228v1/ na na na haploid bacteria 4755998 4716298 43.000000 0 323 550 NCBI RefSeq GCF_000312285.1-RS_2026_01_07 2026-01-07 4695 4398 48 na GCF_000312305.1 PRJNA224116 SAMEA2272768 CAJK00000000.1 reference genome 1197728 340486 Prevotella conceptionensis 9403948 strain=9403948 na latest Scaffold Major Full 2012-10-05 ASM31230v1 ebi GCA_000312305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/305/GCF_000312305.1_ASM31230v1/ na na na haploid bacteria 4080115 3931643 47.000000 0 102 400 NCBI RefSeq GCF_000312305.1-RS_2025_12_11 2025-12-11 3214 2877 52 na GCF_000312345.1 PRJNA224116 SAMEA2271986 CAJP00000000.1 reference genome 1203190 441500 Corynebacterium timonense 5401744 strain=5401744 na latest Scaffold Major Full 2012-10-03 ASM31234v1 ebi GCA_000312345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/345/GCF_000312345.1_ASM31234v1/ na assembly from type material na haploid bacteria 2590418 2555337 67.000000 0 18 57 NCBI RefSeq GCF_000312345.1-RS_2025_12_11 2025-12-11 2485 2354 58 na GCF_000312365.2 PRJNA224116 SAMEA2272478 CAJU000000000.2 reference genome 938293 938293 Anaerococcus provencensis strain=9402080 na latest Scaffold Major Full 2013-05-30 ASM31236v2 ebi GCA_000312365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/365/GCF_000312365.2_ASM31236v2/ na assembly from type material na haploid bacteria 2265938 2252904 33.500000 0 8 26 NCBI RefSeq GCF_000312365.2-RS_2025_12_09 2025-12-09 2189 2089 59 na GCF_000312385.1 PRJNA224116 SAMEA2272095 CAJY00000000.1 na 1151061 1151061 Tsukamurella sp. 1534 strain=1534 na latest Scaffold Major Full 2012-10-03 ASM31238v1 ebi GCA_000312385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/385/GCF_000312385.1_ASM31238v1/ na na na haploid bacteria 4503402 4486005 71.000000 0 4 42 NCBI RefSeq GCF_000312385.1-RS_2024_08_22 2024-08-22 4432 4332 53 na GCF_000312405.1 PRJNA224116 SAMEA2272482 CAKF00000000.1 reference genome 1203076 148604 Limosilactobacillus ingluviei str. Autruche 4 strain=Autruche 4 na latest Scaffold Major Full 2012-10-03 ASM31240v1 Seydina GCA_000312405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/405/GCF_000312405.1_ASM31240v1/ na na na haploid bacteria 2013830 1979644 51.000000 0 8 40 NCBI RefSeq GCF_000312405.1-RS_2025_07_22 2025-07-22 1983 1889 71 na GCF_000312425.1 PRJNA224116 SAMEA2272098 CAKO00000000.1 reference genome 1205680 445220 Reyranella massiliensis 521 strain=521 na latest Scaffold Major Full 2012-10-03 ASM31242v1 ebi GCA_000312425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/425/GCF_000312425.1_ASM31242v1/ na assembly from type material na haploid bacteria 5792259 5771094 65.000000 0 1 42 NCBI RefSeq GCF_000312425.1-RS_2026_05_01 2026-05-01 5757 5669 54 na GCF_000312445.1 PRJNA224116 SAMEA2272382 CAKQ00000000.1 reference genome 1204719 555313 Phocaeicola abscessus CCUG 55929 strain=CCUG 55929 na latest Scaffold Major Full 2012-10-03 ASM31244v1 ebi GCA_000312445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/445/GCF_000312445.1_ASM31244v1/ na assembly from type material na haploid bacteria 2536876 2530631 47.500000 0 14 33 NCBI RefSeq GCF_000312445.1-RS_2026_05_01 2026-05-01 2080 1970 55 na GCF_000312465.1 PRJNA224116 SAMN02469678 ANAV00000000.1 na 1006003 546 Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 strain=MTCC 1658 na latest Contig Major Full 2012-11-09 ASM31246v1 Institute of Microbial Technology (IMTECH), Chandigarh GCA_000312465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/465/GCF_000312465.1_ASM31246v1/ na assembly from type material na haploid bacteria 5001265 5001265 51.500000 0 171 171 NCBI RefSeq GCF_000312465.1-RS_2025_08_01 2025-08-01 4917 4726 91 23405287 GCF_000312485.1 PRJNA224116 SAMEA2272758 CAKR00000000.1 reference genome 1205683 419257 Yersinia massiliensis CCUG 53443 strain=CCUG 53443 na latest Scaffold Major Full 2012-10-03 ASM31248v1 ebi GCA_000312485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/485/GCF_000312485.1_ASM31248v1/ na assembly from type material na haploid bacteria 5050276 5028113 47.500000 0 22 60 NCBI RefSeq GCF_000312485.1-RS_2025_12_11 2025-12-11 4611 4452 79 na GCF_000312505.2 PRJNA224116 SAMEA2272216 CALI00000000.2 na 938288 938288 Fenollaria massiliensis strain=9401234 na latest Scaffold Major Full 2013-07-17 Cb_9401234 ebi GCA_000312505.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/505/GCF_000312505.2_Cb_9401234/ na assembly from type material na haploid bacteria 1709677 1709611 34.500000 0 7 10 NCBI RefSeq GCF_000312505.2-RS_2026_04_14 2026-04-14 1692 1634 33 25197455 GCF_000312525.1 PRJNA224116 SAMEA2272606 CALU00000000.1 reference genome 928210 928210 Bartonella florencae strain=R4 na latest Scaffold Major Full 2012-10-03 ASM31252v1 ebi GCA_000312525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/525/GCF_000312525.1_ASM31252v1/ na assembly from type material na haploid bacteria 2053511 1991253 38.500000 0 89 145 NCBI RefSeq GCF_000312525.1-RS_2026_04_23 2026-04-23 1852 1663 46 na GCF_000312545.1 PRJNA224116 SAMEA2272101 CALV00000000.1 reference genome 929794 1468418 Bartonella senegalensis OS02 strain=OS02 na latest Scaffold Major Full 2012-10-03 ASM31254v1 ebi GCA_000312545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/545/GCF_000312545.1_ASM31254v1/ na assembly from type material na haploid bacteria 2002317 1956883 38.500000 0 41 99 NCBI RefSeq GCF_000312545.1-RS_2026_04_23 2026-04-23 1670 1477 46 na GCF_000312565.1 PRJNA224116 SAMEA2272486 CALW00000000.2 reference genome 1205681 481139 Bartonella rattaustraliani AUST/NH4 strain=AUST/NH4 na latest Contig Major Full 2012-12-04 ASM31256v2 ebi GCA_000312565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/565/GCF_000312565.1_ASM31256v2/ na assembly from type material na haploid bacteria 2158445 2158445 39.000000 0 108 108 NCBI RefSeq GCF_000312565.1-RS_2026_04_23 2026-04-23 1916 1689 49 23209252 GCF_000312585.1 PRJNA224116 SAMEA2272465 CALX00000000.1 na 1221525 481138 Bartonella queenslandensis AUST/NH15 strain=AUST/NH15 na latest Scaffold Major Full 2012-10-03 ASM31258v1 ebi GCA_000312585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/585/GCF_000312585.1_ASM31258v1/ na na na haploid bacteria 2377862 2236228 38.500000 0 598 921 NCBI RefSeq GCF_000312585.1-RS_2026_04_23 2026-04-23 2190 1816 45 na GCF_000312605.1 PRJNA224116 SAMEA2271918 CALY00000000.2 na 1094556 270250 Bartonella rattimassiliensis 15908 strain=15908 na latest Contig Major Full 2012-12-04 ASM31260v2 ebi GCA_000312605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/605/GCF_000312605.1_ASM31260v2/ na assembly from type material na haploid bacteria 2008186 2008186 37.000000 0 93 93 NCBI RefSeq GCF_000312605.1-RS_2026_04_23 2026-04-23 1729 1545 50 23209253 GCF_000312625.1 PRJNA224116 SAMEA2272320 CALZ00000000.1 na 872326 420645 Lactobacillus equicursoris 66c strain=66c na latest Contig Major Full 2012-10-02 ASM31262v1 Sycou GCA_000312625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/625/GCF_000312625.1_ASM31262v1/ na na na haploid bacteria 2355793 2355793 48.000000 0 161 161 NCBI RefSeq GCF_000312625.1-RS_2026_03_21 2026-03-21 2313 2160 84 na GCF_000312645.1 PRJNA224116 SAMEA2272084 CAMA00000000.1 na 1293597 420645 Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 strain=type strain:CIP 110162 na latest Contig Major Full 2012-10-02 ASM31264v1 Sycou GCA_000312645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/645/GCF_000312645.1_ASM31264v1/ na assembly from type material na haploid bacteria 2154766 2154766 48.000000 0 232 232 NCBI RefSeq GCF_000312645.1-RS_2026_03_21 2026-03-21 2203 2052 74 na GCF_000312665.1 PRJNA224116 SAMEA2272470 CANI00000000.1 reference genome 1211777 1079800 Rhizobium mesoamericanum STM3625 strain=STM3625 na latest Scaffold Major Full 2012-10-12 ASM31266v1 Genoscope CEA GCA_000312665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/665/GCF_000312665.1_ASM31266v1/ na na na haploid bacteria 6461927 6453427 59.000000 0 7 92 NCBI RefSeq GCF_000312665.1-RS_2026_04_23 2026-04-23 6312 5958 53 23405314 GCF_000312685.1 PRJNA224116 SAMN02604113 na na 1111678 1359 Lactococcus cremoris subsp. cremoris UC509.9 strain=UC509.9 na latest Complete Genome Major Full 2012-11-13 ASM31268v1 University College Cork GCA_000312685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/685/GCF_000312685.1_ASM31268v1/ na na na haploid bacteria 2457347 2457347 35.500000 9 9 9 NCBI RefSeq GCF_000312685.1-RS_2025_08_24 2025-08-24 2517 2260 83 23405300 GCF_000312705.1 PRJNA224116 SAMN02604187 na na 46234 46234 Anabaena sp. 90 strain=90 na latest Complete Genome Major Full 2012-11-13 ASM31270v1 University of Helsinki GCA_000312705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/705/GCF_000312705.1_ASM31270v1/ na na na haploid bacteria 5305675 5305675 38.000000 5 5 5 NCBI RefSeq GCF_000312705.1-RS_2024_08_22 2024-08-22 5034 4813 63 23148582 GCF_000312725.1 PRJNA224116 SAMEA2272205 CAIL00000000.1 na 1160282 1126 Microcystis aeruginosa PCC 9806 strain=PCC 9806 na latest Scaffold Major Full 2012-08-06 ASM31272v1 Genoscope CEA GCA_000312725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/725/GCF_000312725.1_ASM31272v1/ na na na haploid bacteria 4262564 4231664 43.000000 0 93 310 NCBI RefSeq GCF_000312725.1-RS_2026_01_07 2026-01-07 4169 3867 48 na GCF_000312745.2 PRJNA224116 SAMN02225277 AMED00000000.2 na 1218147 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm6 strain=STm6 na latest Contig Major Full 2013-08-23 STm6.2 University of Melbourne GCA_000312745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/745/GCF_000312745.2_STm6.2/ na na na haploid bacteria 4937965 4937965 52.000000 0 83 83 NCBI RefSeq GCF_000312745.2-RS_2025_04_19 2025-04-19 4893 4631 114 23792739 GCF_000312765.2 PRJNA224116 SAMN02225281 AMEF00000000.2 na 1218151 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm11 strain=STm11 na latest Contig Major Full 2013-08-23 STm11.2 University of Melbourne GCA_000312765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/765/GCF_000312765.2_STm11.2/ na na na haploid bacteria 4943672 4943672 52.000000 0 110 110 NCBI RefSeq GCF_000312765.2-RS_2025_08_14 2025-08-14 4917 4642 133 23792739 GCF_000312785.2 PRJNA224116 SAMN02225282 AMEG00000000.2 na 1218152 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm12 strain=STm12 na latest Scaffold Major Full 2013-08-23 STm12.2 University of Melbourne GCA_000312785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/785/GCF_000312785.2_STm12.2/ na na na haploid bacteria 4981964 4981964 52.000000 1 253 253 NCBI RefSeq GCF_000312785.2-RS_2025_08_18 2025-08-18 4914 4636 123 23792739 GCF_000312805.2 PRJNA224116 SAMN02225276 AMEH00000000.2 na 1218153 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm5 strain=STm5 na latest Contig Major Full 2013-08-23 STm5.2 University of Melbourne GCA_000312805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/805/GCF_000312805.2_STm5.2/ na na na haploid bacteria 4931070 4931070 52.000000 0 449 449 NCBI RefSeq GCF_000312805.2-RS_2025_01_06 2025-01-06 5130 4763 96 na GCF_000312825.2 PRJNA224116 SAMN02221889 AMDX00000000.2 na 1218143 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm1 strain=STm1 na latest Contig Major Full 2013-08-23 STm1.2 University of Melbourne GCA_000312825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/825/GCF_000312825.2_STm1.2/ na na na haploid bacteria 4942590 4942590 52.000000 0 115 115 NCBI RefSeq GCF_000312825.2-RS_2025_02_14 2025-02-14 4882 4630 102 23792739 GCF_000312845.2 PRJNA224116 SAMN02225278 AMDZ00000000.2 na 1218148 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm8 strain=STm8 na latest Contig Major Full 2013-08-23 STm8.2 University of Melbourne GCA_000312845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/845/GCF_000312845.2_STm8.2/ na na na haploid bacteria 4935341 4935341 52.000000 0 95 95 NCBI RefSeq GCF_000312845.2-RS_2025_04_19 2025-04-19 4901 4621 130 23792739 GCF_000312865.2 PRJNA224116 SAMN02225274 AMEB00000000.2 na 1218145 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm3 strain=STm3 na latest Contig Major Full 2013-08-23 STm3.2 University of Melbourne GCA_000312865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/865/GCF_000312865.2_STm3.2/ na na na haploid bacteria 4944306 4944306 52.000000 0 105 105 NCBI RefSeq GCF_000312865.2-RS_2025_04_18 2025-04-18 4892 4627 117 23792739 GCF_000312885.2 PRJNA224116 SAMN02225275 AMEC00000000.2 na 1218146 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm4 strain=STm4 na latest Contig Major Full 2013-08-23 STm4.2 University of Melbourne GCA_000312885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/885/GCF_000312885.2_STm4.2/ na na na haploid bacteria 4967101 4967101 52.000000 0 147 147 NCBI RefSeq GCF_000312885.2-RS_2025_04_19 2025-04-19 4906 4626 130 23792739 GCF_000312905.2 PRJNA224116 SAMN02225280 AMEE00000000.2 na 1218150 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm10 strain=STm10 na latest Contig Major Full 2013-08-23 STm10.2 University of Melbourne GCA_000312905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/905/GCF_000312905.2_STm10.2/ na na na haploid bacteria 4946109 4946109 52.000000 0 104 104 NCBI RefSeq GCF_000312905.2-RS_2025_04_15 2025-04-15 4899 4629 126 23792739 GCF_000312945.1 PRJNA224116 SAMEA2271991 CAKT00000000.1 na 1331239 518 Bordetella bronchiseptica MO211 strain=D445 na latest Scaffold Major Full 2012-11-02 ASM31294v1 WTSI GCA_000312945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/312/945/GCF_000312945.1_ASM31294v1/ na na na haploid bacteria 5243194 4991293 68.000000 0 1 366 NCBI RefSeq GCF_000312945.1-RS_2026_04_21 2026-04-21 5030 4575 59 na GCF_000313065.1 PRJNA224116 SAMEA2272065 CAKU00000000.1 na 1208659 518 Bordetella bronchiseptica Bbr77 strain=Bbr77 na latest Scaffold Major Full 2012-11-02 ASM31306v1 WTSI GCA_000313065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/065/GCF_000313065.1_ASM31306v1/ na na na haploid bacteria 5115717 4969658 68.000000 0 1 250 NCBI RefSeq GCF_000313065.1-RS_2026_05_25 2026-05-25 4887 4662 57 na GCF_000313085.1 PRJNA224116 SAMEA2272559 CAKS00000000.1 na 1208657 518 Bordetella bronchiseptica 1289 strain=1289 na latest Scaffold Major Full 2012-11-02 ASM31308v1 WTSI GCA_000313085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/085/GCF_000313085.1_ASM31308v1/ na na na haploid bacteria 5208522 5207899 68.000000 0 1 6 NCBI RefSeq GCF_000313085.1-RS_2026_05_25 2026-05-25 4909 4820 67 na GCF_000313155.1 PRJNA224116 SAMN02469379 ANAI00000000.1 na 1245477 1352 Enterococcus faecium LCT-EF20 strain=LCT-EF20 na latest Scaffold Major Full 2013-01-03 ASM31315v1 BGI-shenzhen GCA_000313155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/155/GCF_000313155.1_ASM31315v1/ na na na haploid bacteria 2809068 2718930 38.000000 0 34 111 NCBI RefSeq GCF_000313155.1-RS_2025_04_23 2025-04-23 2687 2521 42 23405294 GCF_000313175.2 PRJNA224116 SAMN02470123 na reference genome 758847 28183 Leptospira santarosai serovar Shermani str. LT 821 strain=LT 821 na latest Complete Genome Major Full 2014-10-08 ASM31317v2 Kidney research center, Chang Gung Memorial Hospital GCA_000313175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/175/GCF_000313175.2_ASM31317v2/ na assembly from type material na haploid bacteria 3983611 3983611 42.000000 2 2 2 NCBI RefSeq GCF_000313175.2-RS_2026_03_30 2026-03-30 3665 3490 44 23041083;26038504 GCF_000313195.1 PRJNA224116 SAMN02469383 ANAJ00000000.1 na 1245478 1352 Enterococcus faecium LCT-EF258 strain=LCT-EF258 na latest Scaffold Major Full 2013-01-03 ASM31319v1 BGI-shenzhen GCA_000313195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/195/GCF_000313195.1_ASM31319v1/ na na na haploid bacteria 2807446 2717416 38.000000 0 26 114 NCBI RefSeq GCF_000313195.1-RS_2025_04_23 2025-04-23 2686 2519 47 23409254 GCF_000313215.2 PRJNA224116 SAMN02471862 AMXW00000000.2 na 1240677 1773 Mycobacterium tuberculosis UM 1072388579 strain=UM 1072388579 na latest Contig Major Full 2014-11-14 ASM31321v2 UNIVERSITY OF MALAYA GCA_000313215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/215/GCF_000313215.2_ASM31321v2/ na na na haploid bacteria 4352382 4352382 65.500000 0 80 80 NCBI RefSeq GCF_000313215.2-RS_2025_07_19 2025-07-19 4201 3924 51 23405310 GCF_000313235.1 PRJNA224116 SAMN02470167 AMXG00000000.1 na 1240676 1240676 Pseudomonas sp. PAMC 26793 strain=PAMC 26793 na latest Contig Major Full 2012-11-15 PAMC26508ASM01 Korea Polar Research Institute GCA_000313235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/235/GCF_000313235.1_PAMC26508ASM01/ na na na haploid bacteria 6771790 6771790 60.500000 0 58 58 NCBI RefSeq GCF_000313235.1-RS_2024_08_21 2024-08-21 6285 6095 79 23405349 GCF_000313255.1 PRJNA224116 SAMN02470975 ANBT00000000.1 na 1245027 584 Proteus mirabilis C05028 strain=C05028 na latest Scaffold Major Full 2013-01-02 Version 1 for Proteus mirabilis C05028 genome BGI-shenzhen GCA_000313255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/255/GCF_000313255.1_Version_1_for_Proteus_mirabilis_C05028_genome/ na na na haploid bacteria 3817619 3793090 38.500000 0 39 85 NCBI RefSeq GCF_000313255.1-RS_2026_01_04 2026-01-04 3506 3364 81 24675851 GCF_000313275.1 PRJNA224116 SAMN02469747 AMPP00000000.1 na 1208319 263 Francisella tularensis subsp. tularensis 70001275 strain=70001275 na latest Contig Major Full 2012-11-15 Ft1.0 Dugway Proving Ground GCA_000313275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/275/GCF_000313275.1_Ft1.0/ na na na haploid bacteria 1815319 1815319 32.500000 0 25 25 NCBI RefSeq GCF_000313275.1-RS_2026_01_30 2026-01-30 1900 1659 42 na GCF_000313345.1 PRJNA224116 SAMN02470176 AMRO00000000.1 na 1234664 81408 Parageobacillus caldoxylosilyticus CIC9 strain=CIC9 na latest Contig Major Full 2012-11-19 CIC9_01 KRIBB GCA_000313345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/345/GCF_000313345.1_CIC9_01/ na na na haploid bacteria 3826547 3826547 44.000000 0 82 82 NCBI RefSeq GCF_000313345.1-RS_2025_12_29 2025-12-29 3931 3732 80 na GCF_000313385.1 PRJNA224116 SAMN02603045 na na 1232394 263 Francisella tularensis subsp. holarctica F92 strain=F92 na latest Complete Genome Major Full 2012-11-19 ASM31338v1 Bundeswehr Institute of Microbiology GCA_000313385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/385/GCF_000313385.1_ASM31338v1/ na na na haploid bacteria 1886888 1886888 32.000000 1 1 1 NCBI RefSeq GCF_000313385.1-RS_2026_01_01 2026-01-01 1966 1577 52 23405342 GCF_000313405.1 PRJNA224116 SAMN01731796 AMXO00000000.1 na 1232150 562 Escherichia coli O26:H11 str. CFSAN001629 strain=CFSAN001629 na latest Contig Major Full 2012-11-19 CFSAN001629_1.0 FDA GCA_000313405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/405/GCF_000313405.1_CFSAN001629_1.0/ na na na haploid bacteria 5442563 5442563 50.500000 0 259 259 NCBI RefSeq GCF_000313405.1-RS_2025_06_09 2025-06-09 5709 5246 110 23682138 GCF_000313425.1 PRJNA224116 SAMN01731797 AMXP00000000.1 na 1232151 562 Escherichia coli O111:H11 str. CFSAN001630 strain=CFSAN001630 na latest Contig Major Full 2012-11-19 CFSAN001630_1.0 FDA GCA_000313425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/425/GCF_000313425.1_CFSAN001630_1.0/ na na na haploid bacteria 5640499 5640499 50.500000 0 435 435 NCBI RefSeq GCF_000313425.1-RS_2025_06_14 2025-06-14 6043 5439 108 na GCF_000313445.1 PRJNA224116 SAMN01731799 AMXQ00000000.1 na 1232154 562 Escherichia coli O111:H8 str. CFSAN001632 strain=CFSAN001632 na latest Contig Major Full 2012-11-19 CFSAN001632_1.0 FDA GCA_000313445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/445/GCF_000313445.1_CFSAN001632_1.0/ na na na haploid bacteria 5300309 5300309 50.500000 0 238 238 NCBI RefSeq GCF_000313445.1-RS_2025_06_13 2025-06-13 5513 5020 105 23682138 GCF_000313485.1 PRJNA248426 SAMEA2272793 CAIF00000000.1 reference genome 1041607 1041607 Hansenula ciferrii strain=NRRL Y-1031 F-60-10 na latest Contig Major Full 2012-09-21 ASM31348v1 Center for Biotechnology GCA_000313485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/485/GCF_000313485.1_ASM31348v1/ na assembly from type material na haploid fungi 15901152 15901152 30.500000 0 364 364 Center for Biotechnology Annotation submitted by Center for Biotechnology 2025-07-15 6702 6702 0 na GCF_000313525.1 PRJNA244785 SAMEA2272653 CAGC00000000.1 reference genome 599839 599839 Fibroporia radiculosa strain=TFFH 294 na latest Scaffold Major Full 2012-03-30 ASM31352v1 Forest Products, Mississippi State University GCA_000313525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/525/GCF_000313525.1_ASM31352v1/ na na na haploid fungi 28378039 28216918 51.000000 0 861 1823 NCBI RefSeq Annotation submitted by NCBI RefSeq 2015-04-16 9184 9184 0 na GCF_000313565.1 PRJNA224116 SAMEA2272058 CAEN00000000.1 na 1034346 1034346 Dielma fastidiosa strain=type strain: JC13 na latest Scaffold Major Full 2012-11-19 ASM31356v2 laboratoire URMITE CNRS 6236 GCA_000313565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/565/GCF_000313565.1_ASM31356v2/ na assembly from type material na haploid bacteria 3615034 3575363 40.000000 0 95 145 NCBI RefSeq GCF_000313565.1-RS_2026_01_27 2026-01-27 3553 3458 57 na GCF_000313595.1 PRJNA224116 SAMN02470786 ANCJ00000000.1 na 1242970 1280 Staphylococcus aureus CN79 strain=CN79 na latest Contig Major Full 2012-11-19 CN79v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000313595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/595/GCF_000313595.1_CN79v1/ na na na haploid bacteria 2876680 2876680 32.500000 0 28 28 NCBI RefSeq GCF_000313595.1-RS_2025_03_19 2025-03-19 2882 2749 32 na GCF_000313615.1 PRJNA224116 SAMN01806160 AMZQ00000000.1 na 1244083 204 Campylobacter showae CSUNSWCD strain=CSUNSWCD na latest Contig Major Full 2012-11-19 Velvet assembly of Campylobacter showae CSUNSWCD University of New South Wales GCA_000313615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/615/GCF_000313615.1_Velvet_assembly_of_Campylobacter_showae_CSUNSWCD/ na na na haploid bacteria 2125173 2125173 45.000000 0 23 23 NCBI RefSeq GCF_000313615.1-RS_2026_04_23 2026-04-23 2201 2128 47 23409253 GCF_000313635.1 PRJNA224116 SAMN02603597 na na 1118964 2100 Mesomycoplasma hyorhinis SK76 strain=SK76 na latest Complete Genome Major Full 2012-11-20 ASM31363v1 MD Anderson Cancer Center GCA_000313635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/635/GCF_000313635.1_ASM31363v1/ na na na haploid bacteria 836897 836897 26.000000 1 1 1 NCBI RefSeq GCF_000313635.1-RS_2026_03_26 2026-03-26 747 684 36 23405353 GCF_000313655.1 PRJNA224116 SAMN02222948 ANFT00000000.1 na 1248420 1338 Streptococcus intermedius BA1 strain=BA1 na latest Contig Major Full 2012-11-20 contig Institute for Genome Sciences GCA_000313655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/655/GCF_000313655.1_contig/ na na na haploid bacteria 1965880 1965880 37.500000 0 48 48 NCBI RefSeq GCF_000313655.1-RS_2026_04_05 2026-04-05 2017 1808 71 23405291 GCF_000313715.1 PRJNA224116 SAMEA2272327 CAGR00000000.2 na 1147754 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. LA5 strain=LA5 na latest Contig Major Full 2012-07-20 ASM31371v2 Institut National de la Recherche Agronomique (INRA) GCA_000313715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/715/GCF_000313715.1_ASM31371v2/ na na na haploid bacteria 4687212 4687199 52.000000 1 75 76 NCBI RefSeq GCF_000313715.1-RS_2026_01_06 2026-01-06 4615 4331 69 22493198 GCF_000313755.1 PRJNA224116 SAMN02470611 AMZB00000000.1 na 1226994 46680 Pseudomonas nitroreducens TX1 strain=TX1 na latest Contig Major Full 2012-11-21 Pseudomonas sp.TX1_v1.0 National Central University GCA_000313755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/755/GCF_000313755.1_Pseudomonas_sp.TX1_v1.0/ na na na haploid bacteria 6694413 6694413 64.500000 0 138 138 NCBI RefSeq GCF_000313755.1-RS_2025_03_10 2025-03-10 6343 6211 52 24482523 GCF_000313775.1 PRJNA224116 SAMN02469394 ANGG00000000.1 na 1195885 3390026 Xanthomonas graminis pv. graminis ART-Xtg29 strain=ART-Xtg29 na latest Contig Major Full 2012-11-21 XTG29 Agroscope Reckenholz-Tänikon Research Station ART GCA_000313775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/775/GCF_000313775.1_XTG29/ na na na haploid bacteria 4100864 4100864 68.500000 0 788 788 NCBI RefSeq GCF_000313775.1-RS_2025_12_29 2025-12-29 3882 3524 58 23578314 GCF_000313895.1 PRJNA224116 SAMN02471429 AMPE00000000.1 na 1212820 1212820 Citrobacter sp. L17 strain=L17 na latest Contig Major Full 2012-11-21 L17dn Universiti Teknologi Malaysia GCA_000313895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/895/GCF_000313895.1_L17dn/ na na na haploid bacteria 5092668 5092668 52.000000 0 63 63 NCBI RefSeq GCF_000313895.1-RS_2024_08_13 2024-08-13 4940 4751 83 na GCF_000313915.1 PRJNA224116 SAMN02469835 AMYT00000000.1 reference genome 1234409 300419 Catellicoccus marimammalium M35/04/3 strain=M35/04/3 na latest Contig Major Full 2012-11-21 CMarimammalium1.0 Georgia Institute of Technology GCA_000313915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/915/GCF_000313915.1_CMarimammalium1.0/ na assembly from type material na haploid bacteria 1285866 1285866 34.000000 0 25 25 NCBI RefSeq GCF_000313915.1-RS_2026_04_23 2026-04-23 1262 1199 55 23405330 GCF_000313935.1 PRJNA224116 SAMN00761232 AMSS00000000.1 na 903915 903915 Acinetobacter sp. WC-141 strain=WC-141 na latest Contig Major Full 2012-11-21 gacin27v1.0 Walter Reed Army Institute of Research GCA_000313935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/313/935/GCF_000313935.1_gacin27v1.0/ na na na haploid bacteria 3932253 3932253 39.000000 0 91 91 NCBI RefSeq GCF_000313935.1-RS_2024_06_10 2024-06-10 3872 3635 83 na GCF_000314005.1 PRJNA224116 SAMN02261255 ALVR00000000.1 reference genome 1173029 54311 Spirulina subsalsa PCC 9445 strain=PCC 9445 na latest Scaffold Major Full 2012-11-26 ASM31400v1 JGI GCA_000314005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/005/GCF_000314005.1_ASM31400v1/ na na na haploid bacteria 5323600 5322800 47.500000 0 2 10 NCBI RefSeq GCF_000314005.1-RS_2026_03_21 2026-03-21 4680 4474 51 23277585 GCF_000314045.1 PRJNA224116 SAMN01795758 ANGM00000000.1 na 1247728 195 Campylobacter coli BIGS0002 strain=BIGS0002 na latest Contig Major Full 2012-11-23 ASM31404v1 Swansea University GCA_000314045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/045/GCF_000314045.1_ASM31404v1/ na na na haploid bacteria 1676912 1676912 31.500000 0 181 181 NCBI RefSeq GCF_000314045.1-RS_2026_03_03 2026-03-03 1861 1709 42 23279096 GCF_000314085.1 PRJNA224116 SAMN01795760 ANGO00000000.1 na 1248399 197 Campylobacter jejuni subsp. jejuni BIGS0004 strain=BIGS0004 na latest Contig Major Full 2012-11-23 ASM31408v1 Swansea University GCA_000314085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/085/GCF_000314085.1_ASM31408v1/ na na na haploid bacteria 1596969 1596969 30.500000 0 108 108 NCBI RefSeq GCF_000314085.1-RS_2025_06_27 2025-06-27 1721 1617 41 23279096 GCF_000314105.1 PRJNA224116 SAMN01795761 ANGP00000000.1 na 1247730 195 Campylobacter coli BIGS0005 strain=BIGS0005 na latest Contig Major Full 2012-11-23 ASM31410v1 Swansea University GCA_000314105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/105/GCF_000314105.1_ASM31410v1/ na na na haploid bacteria 1589408 1589408 32.000000 0 255 255 NCBI RefSeq GCF_000314105.1-RS_2025_04_18 2025-04-18 1764 1581 36 23279096 GCF_000314265.1 PRJNA224116 SAMN01795769 ANGX00000000.1 na 1248400 197 Campylobacter jejuni subsp. jejuni BIGS0013 strain=BIGS0013 na latest Contig Major Full 2012-11-23 ASM31426v1 Swansea University GCA_000314265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/265/GCF_000314265.1_ASM31426v1/ na na na haploid bacteria 1551351 1551351 30.500000 0 86 86 NCBI RefSeq GCF_000314265.1-RS_2025_06_04 2025-06-04 1676 1550 42 23279096 GCF_000314285.1 PRJNA224116 SAMN01795898 ANGY00000000.1 na 1248401 197 Campylobacter jejuni subsp. jejuni BIGS0014 strain=BIGS0014 na latest Contig Major Full 2012-11-23 ASM31428v1 Swansea University GCA_000314285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/285/GCF_000314285.1_ASM31428v1/ na na na haploid bacteria 1543877 1543877 31.000000 0 324 324 NCBI RefSeq GCF_000314285.1-RS_2025_06_27 2025-06-27 1748 1570 35 23279096 GCF_000314305.1 PRJNA224116 SAMN01795899 ANGZ00000000.1 na 1247738 195 Campylobacter coli BIGS0015 strain=BIGS0015 na latest Contig Major Full 2012-11-23 ASM31430v1 Swansea University GCA_000314305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/305/GCF_000314305.1_ASM31430v1/ na na na haploid bacteria 1594196 1594196 31.500000 0 216 216 NCBI RefSeq GCF_000314305.1-RS_2025_04_18 2025-04-18 1764 1614 38 23279096 GCF_000314345.1 PRJNA224116 SAMN01795901 ANHB00000000.1 na 1247740 195 Campylobacter coli BIGS0017 strain=BIGS0017 na latest Contig Major Full 2012-11-23 ASM31434v1 Swansea University GCA_000314345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/345/GCF_000314345.1_ASM31434v1/ na na na haploid bacteria 1633576 1633576 31.500000 0 79 79 NCBI RefSeq GCF_000314345.1-RS_2026_06_30 2026-06-30 1737 1648 41 23279096 GCF_000314365.1 PRJNA224116 SAMN01795902 ANHC00000000.1 na 1247741 195 Campylobacter coli BIGS0018 strain=BIGS0018 na latest Contig Major Full 2012-11-23 ASM31436v1 Swansea University GCA_000314365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/365/GCF_000314365.1_ASM31436v1/ na na na haploid bacteria 1618028 1618028 31.500000 0 206 206 NCBI RefSeq GCF_000314365.1-RS_2025_04_18 2025-04-18 1822 1654 35 23279096 GCF_000314385.1 PRJNA224116 SAMN01795903 ANHD00000000.1 na 1247742 195 Campylobacter coli BIGS0019 strain=BIGS0019 na latest Contig Major Full 2012-11-23 ASM31438v1 Swansea University GCA_000314385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/385/GCF_000314385.1_ASM31438v1/ na na na haploid bacteria 1678945 1678945 31.500000 0 276 276 NCBI RefSeq GCF_000314385.1-RS_2025_04_18 2025-04-18 1885 1718 33 23279096 GCF_000314425.1 PRJNA224116 SAMN01795905 ANHF00000000.1 na 1247744 195 Campylobacter coli BIGS0021 strain=BIGS0021 na latest Contig Major Full 2012-11-23 ASM31442v1 Swansea University GCA_000314425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/425/GCF_000314425.1_ASM31442v1/ na na na haploid bacteria 1566888 1566888 32.000000 0 374 374 NCBI RefSeq GCF_000314425.1-RS_2025_04_18 2025-04-18 1821 1622 32 23279096 GCF_000314445.1 PRJNA224116 SAMN01795906 ANHG00000000.1 na 1248402 197 Campylobacter jejuni subsp. jejuni BIGS0022 strain=BIGS0022 na latest Contig Major Full 2012-11-23 ASM31444v1 Swansea University GCA_000314445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/445/GCF_000314445.1_ASM31444v1/ na na na haploid bacteria 1573736 1573736 31.000000 0 169 169 NCBI RefSeq GCF_000314445.1-RS_2025_06_29 2025-06-29 1746 1604 38 23279096 GCF_000314505.1 PRJNA224116 SAMN01795909 ANHJ00000000.1 na 1248403 195 Campylobacter coli BIGS0025 strain=BIGS0025 na latest Contig Major Full 2012-11-23 ASM31450v1 Swansea University GCA_000314505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/505/GCF_000314505.1_ASM31450v1/ na na na haploid bacteria 1657253 1657253 31.500000 0 261 261 NCBI RefSeq GCF_000314505.1-RS_2025_04_14 2025-04-14 1870 1696 31 23279096 GCF_000314525.1 PRJNA224116 SAMN01795910 ANHK00000000.1 na 1248404 197 Campylobacter jejuni subsp. jejuni BIGS0030 strain=BIGS0030 na latest Contig Major Full 2012-11-23 ASM31452v1 Swansea University GCA_000314525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/525/GCF_000314525.1_ASM31452v1/ na na na haploid bacteria 1607358 1607358 30.500000 0 422 422 NCBI RefSeq GCF_000314525.1-RS_2025_06_29 2025-06-29 1967 1711 44 23279096 GCF_000314555.1 PRJNA224116 SAMN02469970 AMSQ00000000.1 na 1229783 555791 Staphylococcus massiliensis S46 strain=S46 na latest Contig Major Full 2012-11-26 ASM31455v1 Institute of Genomics and Integrative Biology GCA_000314555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/555/GCF_000314555.1_ASM31455v1/ na na na haploid bacteria 2447110 2447110 36.500000 0 64 64 NCBI RefSeq GCF_000314555.1-RS_2026_01_23 2026-01-23 2429 2302 68 23929469 GCF_000314575.1 PRJNA224116 SAMN02469967 AMSP00000000.1 na 1229781 33889 Brevibacterium casei S18 strain=S18 na latest Contig Major Full 2012-11-26 ASM31457v1 Institute of Genomics and Integrative Biology GCA_000314575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/575/GCF_000314575.1_ASM31457v1/ na na na haploid bacteria 3664641 3664641 68.000000 0 43 43 NCBI RefSeq GCF_000314575.1-RS_2025_08_06 2025-08-06 3305 3225 55 na GCF_000314615.1 PRJNA224116 SAMN00761241 AMZS00000000.1 na 903918 903918 Acinetobacter sp. WC-323 strain=WC-323 na latest Contig Major Full 2012-11-26 gacin30v1.0 Walter Reed Army Institute of Research GCA_000314615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/615/GCF_000314615.1_gacin30v1.0/ na na na haploid bacteria 4047401 4047401 42.500000 0 77 77 NCBI RefSeq GCF_000314615.1-RS_2024_06_11 2024-06-11 3931 3735 82 na GCF_000314635.1 PRJNA224116 SAMN00761224 AMZT00000000.1 na 903919 470 Acinetobacter baumannii WC-348 strain=WC-348 na latest Contig Major Full 2012-11-26 gacin31v1.0 Walter Reed Army Institute of Research GCA_000314635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/635/GCF_000314635.1_gacin31v1.0/ na na na haploid bacteria 4108488 4108488 39.000000 0 61 61 NCBI RefSeq GCF_000314635.1-RS_2025_04_23 2025-04-23 3931 3727 86 26195261 GCF_000314655.1 PRJNA224116 SAMN00761225 AMZU00000000.1 na 903920 470 Acinetobacter baumannii Naval-113 strain=Naval-113 na latest Contig Major Full 2012-11-26 gacin32v1.0 Walter Reed Army Institute of Research GCA_000314655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/655/GCF_000314655.1_gacin32v1.0/ na na na haploid bacteria 4095626 4095626 39.000000 0 130 130 NCBI RefSeq GCF_000314655.1-RS_2025_04_23 2025-04-23 4034 3814 91 26195261 GCF_000314675.2 PRJNA224116 SAMN02596753 AGWX00000000.1 reference genome 883078 56946 Afipia broomeae ATCC 49717 strain=ATCC 49717 na latest Scaffold Major Full 2013-02-06 Afip_broo_ATCC_49717_V1 Broad Institute GCA_000314675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/675/GCF_000314675.2_Afip_broo_ATCC_49717_V1/ na assembly from type material na haploid bacteria 5261968 5259998 61.500000 0 4 6 NCBI RefSeq GCF_000314675.2-RS_2026_05_26 2026-05-26 5065 4954 54 na GCF_000314715.2 PRJNA224116 SAMN02463887 AGZV00000000.1 na 883130 1282 Staphylococcus epidermidis BVS058A4 strain=BVS058A4 na latest Scaffold Major Full 2013-02-06 Stap_epid_BVS058A4_V1 Broad Institute GCA_000314715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/715/GCF_000314715.2_Stap_epid_BVS058A4_V1/ na na na haploid bacteria 2610723 2577137 32.000000 0 17 50 NCBI RefSeq GCF_000314715.2-RS_2026_01_11 2026-01-11 2512 2369 60 na GCF_000314735.2 PRJNA224116 SAMN02463900 AGWZ00000000.1 na 883080 1035 Afipia felis ATCC 53690 strain=ATCC 53690 na latest Scaffold Major Full 2013-02-06 Afip_feli_felis_ATCC_53690_V1 Broad Institute GCA_000314735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/735/GCF_000314735.2_Afip_feli_felis_ATCC_53690_V1/ na assembly from type material na haploid bacteria 4203290 4197620 60.500000 0 11 12 NCBI RefSeq GCF_000314735.2-RS_2026_05_26 2026-05-26 4100 4000 58 na GCF_000314755.2 PRJNA224116 SAMN02463891 AGZX00000000.1 na 883166 1286 Staphylococcus simulans ACS-120-V-Sch1 strain=ACS-120-V-Sch1 na latest Scaffold Major Full 2013-02-06 Stap_simu_ACS-120-V-SCH1_V1 Broad Institute GCA_000314755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/755/GCF_000314755.2_Stap_simu_ACS-120-V-SCH1_V1/ na na na haploid bacteria 2669601 2639907 36.000000 0 9 38 NCBI RefSeq GCF_000314755.2-RS_2026_02_08 2026-02-08 2547 2439 75 na GCF_000314775.2 PRJNA224116 SAMN02463945 AGZY00000000.1 na 999424 999424 Streptococcus sp. F0441 strain=F0441 na latest Scaffold Major Full 2013-02-06 Strept_sp_F0441_V1 Broad Institute GCA_000314775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/775/GCF_000314775.2_Strept_sp_F0441_V1/ na na na haploid bacteria 2000650 1981149 41.000000 0 1 11 NCBI RefSeq GCF_000314775.2-RS_2025_08_25 2025-08-25 1989 1872 79 na GCF_000314795.2 PRJNA224116 SAMN02463946 AGZZ00000000.1 na 999425 999425 Streptococcus sp. F0442 strain=F0442 na latest Scaffold Major Full 2013-02-06 Strept_sp_F0442_V1 Broad Institute GCA_000314795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/795/GCF_000314795.2_Strept_sp_F0442_V1/ na na na haploid bacteria 2231248 2224000 42.000000 0 3 13 NCBI RefSeq GCF_000314795.2-RS_2025_08_25 2025-08-25 2217 2102 77 na GCF_000314815.2 PRJNA224116 SAMN02463892 AHAA00000000.1 na 883168 149016 Streptococcus urinalis FB127-CNA-2 strain=FB127-CNA-2 na latest Scaffold Major Full 2013-02-06 Stre_urin_FB127-CNA2_V1 Broad Institute GCA_000314815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/815/GCF_000314815.2_Stre_urin_FB127-CNA2_V1/ na na na haploid bacteria 2139779 2127389 34.000000 0 4 10 NCBI RefSeq GCF_000314815.2-RS_2026_02_08 2026-02-08 2221 2031 61 na GCF_000314835.2 PRJNA224116 SAMN02429043 AJSB00000000.1 na 1141663 587 Providencia rettgeri Dmel1 strain=Dmel1 na latest Chromosome Major Full 2013-05-22 ASM31483v2 Cornell University GCA_000314835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/835/GCF_000314835.2_ASM31483v2/ na na na haploid bacteria 4348646 4251508 40.500000 2 2 10 NCBI RefSeq GCF_000314835.2-RS_2026_03_11 2026-03-11 3980 3730 75 23145767 GCF_000314855.2 PRJNA224116 SAMN02428957 AKKL00000000.1 reference genome 1141662 516074 Providencia burhodogranariea DSM 19968 strain=DSM 19968 na latest Scaffold Major Full 2013-01-17 ASM31485v2 Cornell University GCA_000314855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/855/GCF_000314855.2_ASM31485v2/ na assembly from type material na haploid bacteria 4579454 4547175 39.000000 0 8 59 NCBI RefSeq GCF_000314855.2-RS_2026_03_11 2026-03-11 3989 3847 71 23145767 GCF_000314875.2 PRJNA224116 SAMN02428991 AKKM00000000.1 na 1141661 126385 Providencia alcalifaciens Dmel2 strain=Dmel2 na latest Scaffold Major Full 2013-01-17 ASM31487v2 Cornell University GCA_000314875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/875/GCF_000314875.2_ASM31487v2/ na na na haploid bacteria 4218892 4189482 42.000000 1 15 54 NCBI RefSeq GCF_000314875.2-RS_2026_03_11 2026-03-11 3954 3798 79 23145767 GCF_000314895.2 PRJNA224116 SAMN02428955 AKKN00000000.1 reference genome 1141660 516075 Providencia sneebia DSM 19967 strain=DSM 19967 na latest Chromosome Major Full 2013-05-22 ASM31489v2 Cornell University GCA_000314895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/895/GCF_000314895.2_ASM31489v2/ na assembly from type material na haploid bacteria 3896123 3553913 38.000000 4 4 17 NCBI RefSeq GCF_000314895.2-RS_2026_03_11 2026-03-11 3279 3073 72 23145767 GCF_000314915.2 PRJNA224116 SAMN02225273 AMDY00000000.2 na 1218144 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm2 strain=STm2 na latest Contig Major Full 2017-12-02 ASM31491v2 University of Melbourne GCA_000314915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/915/GCF_000314915.2_ASM31491v2/ na na na haploid bacteria 4986765 4986765 52.000000 0 97 97 NCBI RefSeq GCF_000314915.2-RS_2025_01_26 2025-01-26 4931 4693 89 23792739;24245509 GCF_000314935.1 PRJNA224116 SAMD00036597 BAEK00000000.1 na 1125747 368405 Paraglaciecola agarilytica NO2 strain=NO2 na latest Contig Major Full 2012-10-30 ASM31493v1 Shandong University GCA_000314935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/935/GCF_000314935.1_ASM31493v1/ na assembly from heterotypic synonym type material na haploid bacteria 5654924 5654924 44.000000 0 96 96 NCBI RefSeq GCF_000314935.1-RS_2026_05_13 2026-05-13 4910 4779 53 25009843 GCF_000314955.1 PRJNA224116 SAMD00036599 BAEM00000000.1 reference genome 1127672 368405 Paraglaciecola chathamensis S18K6 strain=S18K6 na latest Contig Major Full 2012-10-30 ASM31495v1 Shandong University GCA_000314955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/955/GCF_000314955.1_ASM31495v1/ na assembly from type material na haploid bacteria 5265460 5265460 44.000000 0 63 63 NCBI RefSeq GCF_000314955.1-RS_2025_07_21 2025-07-21 4478 4381 61 25009843 GCF_000314975.1 PRJNA224116 SAMD00036600 BAEN00000000.1 reference genome 1127673 477689 Aliiglaciecola lipolytica E3 strain=E3 na latest Contig Major Full 2012-10-30 ASM31497v1 Shandong University GCA_000314975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/975/GCF_000314975.1_ASM31497v1/ na assembly from type material na haploid bacteria 4842140 4842140 41.000000 0 76 76 NCBI RefSeq GCF_000314975.1-RS_2025_12_09 2025-12-09 4272 4185 54 25009843 GCF_000314995.1 PRJNA224116 SAMD00036601 BAEO00000000.1 reference genome 493475 1128911 Paraglaciecola arctica BSs20135 strain=BSs20135 na latest Contig Major Full 2012-10-30 ASM31499v1 Shandong University GCA_000314995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/314/995/GCF_000314995.1_ASM31499v1/ na assembly from type material na haploid bacteria 5964456 5964456 40.000000 0 72 72 NCBI RefSeq GCF_000314995.1-RS_2025_12_09 2025-12-09 5196 5088 57 25009843 GCF_000315015.1 PRJNA224116 SAMD00036602 BAEP00000000.1 reference genome 1128912 197222 Paraglaciecola mesophila KMM 241 strain=KMM 241 na latest Contig Major Full 2012-10-30 ASM31501v1 Shandong University GCA_000315015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/015/GCF_000315015.1_ASM31501v1/ na assembly from type material na haploid bacteria 5055761 5055761 44.500000 0 90 90 NCBI RefSeq GCF_000315015.1-RS_2025_12_10 2025-12-10 4414 4299 62 25009843 GCF_000315035.1 PRJNA224116 SAMD00036603 BAEQ00000000.1 na 1121922 56807 Brumicola pallidula DSM 14239 = ACAM 615 strain=ACAM 615 na latest Contig Major Full 2012-10-30 ASM31503v1 Shandong University GCA_000315035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/035/GCF_000315035.1_ASM31503v1/ na assembly from type material na haploid bacteria 4360693 4360693 41.000000 0 68 68 NCBI RefSeq GCF_000315035.1-RS_2025_08_08 2025-08-08 3875 3735 56 25009843 GCF_000315055.1 PRJNA224116 SAMD00036604 BAER00000000.1 reference genome 1129793 222814 Paraglaciecola polaris LMG 21857 strain=LMG 21857 na latest Contig Major Full 2012-10-30 ASM31505v1 Shandong University GCA_000315055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/055/GCF_000315055.1_ASM31505v1/ na assembly from type material na haploid bacteria 5239503 5239503 44.000000 0 146 146 NCBI RefSeq GCF_000315055.1-RS_2025_12_09 2025-12-09 4645 4494 54 25009843 GCF_000315075.1 PRJNA224116 SAMD00036605 BAES00000000.1 reference genome 1129794 326544 Paraglaciecola psychrophila 170 strain=170 na latest Contig Major Full 2012-10-30 ASM31507v1 Shandong University GCA_000315075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/075/GCF_000315075.1_ASM31507v1/ na assembly from type material na haploid bacteria 5335596 5335596 40.500000 0 107 107 NCBI RefSeq GCF_000315075.1-RS_2025_12_09 2025-12-09 4858 4621 58 25009843 GCF_000315135.1 PRJNA224116 SAMN02470919 AMRZ00000000.1 na 1234128 670 Vibrio parahaemolyticus SNUVpS-1 strain=SNUVpS-1 na latest Contig Major Full 2012-11-26 De novo Seoul National University GCA_000315135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/135/GCF_000315135.1_De_novo/ na na na haploid bacteria 5241845 5241845 45.000000 0 60 60 NCBI RefSeq GCF_000315135.1-RS_2025_04_18 2025-04-18 4762 4641 71 23405312 GCF_000315195.1 PRJNA224116 SAMD00036618 BAFL00000000.1 na 1156800 196024 Aeromonas dhakensis AAK1 strain=AAK1 na latest Contig Major Full 2012-05-04 ASM31519v1 National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes (NHRI), Taiwan GCA_000315195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/195/GCF_000315195.1_ASM31519v1/ na na na haploid bacteria 4767693 4767693 61.500000 1 37 37 NCBI RefSeq GCF_000315195.1-RS_2025_08_09 2025-08-09 4404 4232 105 22815437 GCF_000315235.1 PRJNA224116 SAMD00036628 BALG00000000.1 reference genome 1212764 78057 Paenibacillus popilliae ATCC 14706 strain=ATCC 14706 na latest Contig Major Full 2012-11-06 ASM31523v1 Kyushu University GCA_000315235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/235/GCF_000315235.1_ASM31523v1/ na assembly from type material na haploid bacteria 3833720 3833720 51.000000 0 583 583 NCBI RefSeq GCF_000315235.1-RS_2026_04_07 2026-04-07 4157 3698 90 na GCF_000315365.1 PRJNA224116 SAMEA2272113 CAOS00000000.1 reference genome 1121428 412895 Desulforamulus hydrothermalis Lam5 = DSM 18033 strain=type strain: Lam5 = DSM 18033 na latest Scaffold Major Full 2012-11-09 ASM31536v1 Genoscope CEA GCA_000315365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/365/GCF_000315365.1_ASM31536v1/ na assembly from type material na haploid bacteria 2695031 2694904 49.500000 0 16 26 NCBI RefSeq GCF_000315365.1-RS_2026_03_28 2026-03-28 2785 2663 75 23405336 GCF_000315405.1 PRJNA224116 SAMN02463889 AGZB00000000.1 na 883162 1352 Enterococcus faecium FB129-CNAB4 strain=FB129-CNAB4 na latest Scaffold Major Full 2012-11-30 Ente_dura_FB129-CNAB4_V1 Broad Institute GCA_000315405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/405/GCF_000315405.1_Ente_dura_FB129-CNAB4_V1/ na na na haploid bacteria 2725994 2697649 38.000000 0 9 22 NCBI RefSeq GCF_000315405.1-RS_2026_01_15 2026-01-15 2645 2525 64 na GCF_000315425.1 PRJNA224116 SAMN02463908 AGZI00000000.1 na 883126 47229 Massilia timonae CCUG 45783 strain=CCUG 45783 na latest Scaffold Major Full 2012-11-30 Mass_timo_CCUG_45783_V1 Broad Institute GCA_000315425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/425/GCF_000315425.1_Mass_timo_CCUG_45783_V1/ na assembly from type material na haploid bacteria 6136500 6038400 65.500000 0 14 76 NCBI RefSeq GCF_000315425.1-RS_2025_08_26 2025-08-26 5380 5225 82 na GCF_000315445.1 PRJNA224116 SAMN02463901 AGXA00000000.1 reference genome 883081 1652 Alloiococcus otitis ATCC 51267 strain=ATCC 51267 na latest Scaffold Major Full 2012-11-30 Allo_otit_ATCC_51267_V1 Broad Institute GCA_000315445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/445/GCF_000315445.1_Allo_otit_ATCC_51267_V1/ na assembly from type material na haploid bacteria 1806596 1784056 44.500000 0 8 35 NCBI RefSeq GCF_000315445.1-RS_2026_05_02 2026-05-02 1684 1587 67 na GCF_000315465.1 PRJNA224116 SAMN02463883 AGWL00000000.1 reference genome 883066 202789 Actinobaculum massiliense ACS-171-V-Col2 strain=ACS-171-V-Col2 na latest Scaffold Major Full 2012-11-30 Acti_mass_ACS-171-V-COL2_V1 Broad Institute GCA_000315465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/465/GCF_000315465.1_Acti_mass_ACS-171-V-COL2_V1/ na na na haploid bacteria 2032016 2021121 60.000000 0 2 8 NCBI RefSeq GCF_000315465.1-RS_2026_03_21 2026-03-21 1747 1678 59 na GCF_000315485.1 PRJNA224116 SAMN02463851 ADLF00000000.1 reference genome 742727 626931 Bacteroides oleiciplenus YIT 12058 strain=YIT 12058 na latest Scaffold Major Full 2012-11-30 Bact_olei_YIT_12058_V1 Broad Institute GCA_000315485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/485/GCF_000315485.1_Bact_olei_YIT_12058_V1/ na assembly from type material na haploid bacteria 7087734 7071115 43.500000 0 15 32 NCBI RefSeq GCF_000315485.1-RS_2025_12_11 2025-12-11 5498 5348 81 na GCF_000315505.1 PRJNA224116 SAMN02463888 AHAF00000000.1 na 883156 1502943 Veillonella seminalis ACS-216-V-Col6b strain=ACS-216-V-Col6b na latest Scaffold Major Full 2012-11-30 Veil_ratt_ACS-216-V-COL6B_V1 Broad Institute GCA_000315505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/505/GCF_000315505.1_Veil_ratt_ACS-216-V-COL6B_V1/ na na na haploid bacteria 2324129 2286294 42.000000 0 4 23 NCBI RefSeq GCF_000315505.1-RS_2026_02_06 2026-02-06 2185 2096 56 na GCF_000315525.1 PRJNA224116 SAMN02463913 AGZU00000000.1 na 883163 13690 Sphingobium yanoikuyae ATCC 51230 strain=ATCC 51230 na latest Scaffold Major Full 2012-11-30 Sphi_yano_ATCC_51230_V1 Broad Institute GCA_000315525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/525/GCF_000315525.1_Sphi_yano_ATCC_51230_V1/ na assembly from type material na haploid bacteria 5532579 5500358 64.500000 0 9 28 NCBI RefSeq GCF_000315525.1-RS_2025_12_23 2025-12-23 5216 5075 75 na GCF_000315545.1 PRJNA224116 SAMN02463944 AGZT00000000.1 na 999423 999423 Selenomonas sp. F0473 strain=F0473 na latest Scaffold Major Full 2012-11-30 Seleno_sp_F0473_V1 Broad Institute GCA_000315545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/545/GCF_000315545.1_Seleno_sp_F0473_V1/ na na na haploid bacteria 2067540 2055819 58.500000 0 2 10 NCBI RefSeq GCF_000315545.1-RS_2024_08_13 2024-08-13 1962 1893 59 na GCF_000315565.1 PRJNA224116 SAMN02261251 ALVW00000000.1 reference genome 221288 221287 Mastigocladopsis repens PCC 10914 strain=PCC 10914 na latest Scaffold Major Full 2012-11-30 ASM31556v1 JGI GCA_000315565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/565/GCF_000315565.1_ASM31556v1/ na na na haploid bacteria 6465655 6463955 43.500000 0 3 20 NCBI RefSeq GCF_000315565.1-RS_2025_12_13 2025-12-13 5827 5576 57 23277585 GCF_000315795.1 PRJNA224116 SAMN01840338 ANHY00000000.1 reference genome 1238182 859058 Caenispirillum salinarum AK4 strain=AK4 na latest Contig Major Full 2012-11-29 Caenispirillum salinarum IMTECH GCA_000315795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/795/GCF_000315795.1_Caenispirillum_salinarum/ na assembly from type material na haploid bacteria 4952465 4952465 69.000000 0 61 61 NCBI RefSeq GCF_000315795.1-RS_2025_12_09 2025-12-09 4609 4515 58 23409257 GCF_000315815.2 PRJNA224116 SAMN02469979 ANHZ00000000.2 na 1236550 71999 Kocuria palustris PEL strain=PEL na latest Contig Major Full 2013-02-25 ASM31581v2 IMTECH GCA_000315815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/815/GCF_000315815.2_ASM31581v2/ na na na haploid bacteria 2872112 2872112 70.500000 0 55 55 NCBI RefSeq GCF_000315815.2-RS_2026_01_23 2026-01-23 2599 2497 51 24504000 GCF_000315835.1 PRJNA224116 SAMN02470915 AMQA00000000.1 na 1232673 644 Aeromonas hydrophila SNUFPC-A8 strain=SNUFPC-A8 na latest Contig Major Full 2012-11-29 De Novo 2.6 Seoul National University GCA_000315835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/835/GCF_000315835.1_De_Novo_2.6/ na na na haploid bacteria 4969090 4969090 61.000000 0 41 41 NCBI RefSeq GCF_000315835.1-RS_2026_04_17 2026-04-17 4683 4529 98 23405367 GCF_000315855.2 PRJNA224116 SAMN02470909 AMQG00000000.2 na 1233098 645 Aeromonas salmonicida subsp. achromogenes AS03 strain=AS03 na latest Contig Major Full 2013-08-13 ASM31585v2 Seoul National University GCA_000315855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/855/GCF_000315855.2_ASM31585v2/ na na na haploid bacteria 4958383 4958383 58.500000 0 69 69 NCBI RefSeq GCF_000315855.2-RS_2026_04_21 2026-04-21 5070 4148 136 24092786 GCF_000315875.1 PRJNA172186 SAMEA2272376 na reference genome 1136231 273371 Lodderomyces orthopsilosis Co 90-125 strain=Co 90-125 na latest Chromosome Major Full 2012-03-14 ASM31587v1 Trinity College Dublin GCA_000315875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/875/GCF_000315875.1_ASM31587v1/ na na na haploid fungi 12659401 12482133 37.500000 8 8 242 Trinity College Dublin GCF_000315875.1-RS_2026_03 2026-03-04 5782 5678 82 22563396 GCF_000315915.1 PRJNA188088 SAMEA2271984 na reference genome 1071380 1071379 Henningerozyma blattae CBS 6284 strain=type strain:CBS 6284 na latest Chromosome Major Full 2012-05-11 ASM31591v1 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000315915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/915/GCF_000315915.1_ASM31591v1/ na assembly from type material na haploid fungi 14048593 14045573 31.500000 10 10 82 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5725 5388 337 22123960 GCF_000315955.1 PRJNA224116 SAMN02604323 na na 1055531 210 Helicobacter pylori Aklavik117 strain=Aklavik117 na latest Complete Genome Major Full 2012-11-26 ASM31595v1 Washington University Medical School GCA_000315955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/955/GCF_000315955.1_ASM31595v1/ na na na haploid bacteria 1636125 1636125 38.500000 3 3 3 NCBI RefSeq GCF_000315955.1-RS_2026_01_23 2026-01-23 1579 1463 45 25883278 GCF_000315975.1 PRJNA224116 SAMN02470109 AMWQ00000000.1 na 1232672 1402 Bacillus licheniformis CGMCC 3963 strain=CGMCC 3963 na latest Contig Major Full 2012-11-29 mt6 Jiangnan University GCA_000315975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/975/GCF_000315975.1_mt6/ na na na haploid bacteria 4514887 4514887 45.500000 0 152 152 NCBI RefSeq GCF_000315975.1-RS_2026_05_01 2026-05-01 4878 4656 71 23405325 GCF_000315995.1 PRJNA224116 SAMN02415227 AMSN00000000.1 na 1235460 28901 Salmonella enterica subsp. enterica serovar Thompson str. 2010K-1863 strain=2010K-1863 na latest Contig Major Full 2012-11-29 2009K-1863v1 Centers for Disease Control & Prevention GCA_000315995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/315/995/GCF_000315995.1_2009K-1863v1/ na na na haploid bacteria 4669398 4669398 52.500000 0 110 110 NCBI RefSeq GCF_000315995.1-RS_2025_04_18 2025-04-18 4585 4315 95 na GCF_000316015.1 PRJNA224116 SAMN02415226 AMRS00000000.1 na 1235459 28901 Salmonella enterica subsp. enterica serovar Mbandaka str. 2009K-0807 strain=2009K-0807 na latest Contig Major Full 2012-11-29 2009K-0807v1 Centers for Disease Control & Prevention GCA_000316015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/015/GCF_000316015.1_2009K-0807v1/ na na na haploid bacteria 4744976 4744976 52.000000 0 53 53 NCBI RefSeq GCF_000316015.1-RS_2025_03_19 2025-03-19 4682 4448 103 na GCF_000316035.1 PRJNA224116 SAMN02470173 ANHX00000000.1 na 1257080 1257080 Paenibacillus sp. PAMC 26794 strain=PAMC 26794 na latest Contig Major Full 2012-11-29 Draft genome sequence of PAMC 26794 Korea Polar Research Institute GCA_000316035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/035/GCF_000316035.1_Draft_genome_sequence_of_PAMC_26794/ na na na haploid bacteria 6657194 6657194 46.000000 0 92 92 NCBI RefSeq GCF_000316035.1-RS_2024_05_23 2024-05-23 5863 5703 88 23409270 GCF_000316075.2 PRJNA224116 SAMN02463890 AGZW00000000.1 na 883164 28035 Staphylococcus lugdunensis ACS-027-V-Sch2 strain=ACS-027-V-Sch2 na latest Scaffold Major Full 2013-02-06 Stap_lugd_ACS-027-V-Sch2_V1 Broad Institute GCA_000316075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/075/GCF_000316075.2_Stap_lugd_ACS-027-V-Sch2_V1/ na na na haploid bacteria 2611013 2592793 34.000000 0 4 17 NCBI RefSeq GCF_000316075.2-RS_2026_03_31 2026-03-31 2497 2387 79 na GCF_000316095.1 PRJNA224116 SAMN02261266 AJFD00000000.1 na 665577 67581 Streptomyces viridosporus T7A strain=T7A na latest Scaffold Major Full 2012-12-03 ASM31609v1 JGI GCA_000316095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/095/GCF_000316095.1_ASM31609v1/ na na na haploid bacteria 8293298 8278578 72.500000 0 6 155 NCBI RefSeq GCF_000316095.1-RS_2025_07_08 2025-07-08 7536 7086 89 23833133 GCF_000316175.1 PRJNA224116 SAMN02604261 na na 1207075 1207075 Pseudomonas sp. UW4 strain=UW4 na latest Complete Genome Major Full 2012-12-03 ASM31617v1 University of Waterloo GCA_000316175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/175/GCF_000316175.1_ASM31617v1/ na na na haploid bacteria 6183388 6183388 60.000000 1 1 1 NCBI RefSeq GCF_000316175.1-RS_2024_05_07 2024-05-07 5605 5400 98 23516524 GCF_000316195.1 PRJNA224116 SAMN01096567 ALNZ00000000.1 reference genome 1289135 1287055 Brachyspira hampsonii 30446 strain=30446 IDAC 161111-01 latest Scaffold Major Full 2012-12-03 ASM31619v1 University of Saskatchewan GCA_000316195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/195/GCF_000316195.1_ASM31619v1/ na na na haploid bacteria 3037350 3019251 27.500000 0 4 37 NCBI RefSeq GCF_000316195.1-RS_2025_12_13 2025-12-13 2670 2589 40 na GCF_000316215.1 PRJNA224116 SAMN02469594 AKYY00000000.1 na 1161101 29442 Pseudomonas tolaasii 6264 strain=6264 na latest Contig Major Full 2012-12-03 Pseudomonas tollassii Chungbuk National University GCA_000316215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/215/GCF_000316215.1_Pseudomonas_tollassii/ na na na haploid bacteria 6233813 6233813 61.000000 0 688 688 NCBI RefSeq GCF_000316215.1-RS_2025_02_17 2025-02-17 6114 5743 63 na GCF_000316245.2 PRJNA224116 SAMN01939167 ANGI00000000.2 na 1236102 573 Klebsiella pneumoniae VA360 strain=VA360 na latest Contig Major Full 2013-03-13 MTE2_ImprovedAssembly Los Alamos National Laboratory GCA_000316245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/245/GCF_000316245.2_MTE2_ImprovedAssembly/ na na na haploid bacteria 5578970 5578970 57.000000 0 210 210 NCBI RefSeq GCF_000316245.2-RS_2025_08_13 2025-08-13 5709 5461 98 23640195 GCF_000316265.2 PRJNA224116 SAMN01939166 ANGH00000000.2 na 1236101 573 Klebsiella pneumoniae JHCK1 strain=JHCK na latest Contig Major Full 2013-03-08 MTE1_ImprovedAssembly Los Alamos National Laboratory GCA_000316265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/265/GCF_000316265.2_MTE1_ImprovedAssembly/ na na na haploid bacteria 6015282 6015282 56.500000 0 227 227 NCBI RefSeq GCF_000316265.2-RS_2025_01_05 2025-01-05 6126 5823 95 23640195 GCF_000316285.1 PRJNA224116 SAMN02469471 AJTY00000000.1 na 1173684 373687 Paenibacillus sonchi X19-5 strain=X19-5 na latest Contig Major Full 2012-12-03 Paenibacillus sonchi X19-5T China Agricultural University GCA_000316285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/285/GCF_000316285.1_Paenibacillus_sonchi_X19-5T/ na assembly from type material na haploid bacteria 7507281 7507281 50.500000 0 1327 1327 NCBI RefSeq GCF_000316285.1-RS_2026_04_29 2026-04-29 7409 6951 57 na GCF_000316325.2 PRJNA224116 SAMN01041331 ANLH00000000.1 na 1005396 562 Escherichia coli 88.1467 strain=88.1467 na latest Scaffold Minor Full 2012-12-12 ASM31632v2 Institute for Genome Sciences GCA_000316325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/325/GCF_000316325.2_ASM31632v2/ na na na haploid bacteria 5363127 5361355 50.500000 0 486 518 NCBI RefSeq GCF_000316325.2-RS_2025_06_16 2025-06-16 5698 5157 90 na GCF_000316345.2 PRJNA224116 SAMN01041330 ANLI00000000.1 na 1005398 562 Escherichia coli 88.1042 strain=88.1042 na latest Scaffold Minor Full 2012-12-12 ASM31634v2 Institute for Genome Sciences GCA_000316345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/345/GCF_000316345.2_ASM31634v2/ na na na haploid bacteria 5250552 5249522 50.500000 0 400 426 NCBI RefSeq GCF_000316345.2-RS_2024_06_12 2024-06-12 5463 4987 93 na GCF_000316365.2 PRJNA224116 SAMN01041328 ANLJ00000000.1 na 1005399 562 Escherichia coli 89.0511 strain=89.0511 na latest Scaffold Minor Full 2012-12-12 ASM31636v2 Institute for Genome Sciences GCA_000316365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/365/GCF_000316365.2_ASM31636v2/ na na na haploid bacteria 5301241 5298159 50.500000 0 427 507 NCBI RefSeq GCF_000316365.2-RS_2025_06_15 2025-06-15 5575 5073 93 na GCF_000316385.2 PRJNA224116 SAMN01041332 ANLK00000000.1 na 1005400 562 Escherichia coli 90.0091 strain=90.0091 na latest Scaffold Minor Full 2012-12-12 ASM31638v2 Institute for Genome Sciences GCA_000316385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/385/GCF_000316385.2_ASM31638v2/ na na na haploid bacteria 5439497 5436484 50.500000 0 522 579 NCBI RefSeq GCF_000316385.2-RS_2025_06_16 2025-06-16 5868 5262 108 na GCF_000316405.2 PRJNA224116 SAMN01041329 ANLL00000000.1 na 1005401 562 Escherichia coli 90.0039 strain=90.0039 na latest Scaffold Minor Full 2012-12-12 ASM31640v2 Institute for Genome Sciences GCA_000316405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/405/GCF_000316405.2_ASM31640v2/ na na na haploid bacteria 5366097 5362236 50.500000 0 360 444 NCBI RefSeq GCF_000316405.2-RS_2025_06_15 2025-06-15 5711 5174 99 na GCF_000316425.2 PRJNA224116 SAMN01041333 ANLM00000000.1 na 1005402 562 Escherichia coli 90.2281 strain=90.2281 na latest Scaffold Minor Full 2012-12-12 ASM31642v2 Institute for Genome Sciences GCA_000316425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/425/GCF_000316425.2_ASM31642v2/ na na na haploid bacteria 5257500 5255598 50.500000 0 369 416 NCBI RefSeq GCF_000316425.2-RS_2025_06_17 2025-06-17 5465 5001 93 na GCF_000316445.2 PRJNA224116 SAMN01041334 ANLN00000000.1 na 1005403 562 Escherichia coli 93.0055 strain=93.0055 na latest Scaffold Minor Full 2012-12-12 ASM31644v2 Institute for Genome Sciences GCA_000316445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/445/GCF_000316445.2_ASM31644v2/ na na na haploid bacteria 5320144 5318086 50.500000 0 369 411 NCBI RefSeq GCF_000316445.2-RS_2025_06_15 2025-06-15 5576 5079 97 na GCF_000316465.1 PRJNA224116 SAMN01041335 ANLO00000000.1 na 1005404 562 Escherichia coli 93.0056 strain=93.0056 na latest Scaffold Major Full 2012-12-12 ASM31646v1 Institute for Genome Sciences GCA_000316465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/465/GCF_000316465.1_ASM31646v1/ na na na haploid bacteria 5293067 5291360 50.500000 0 361 384 NCBI RefSeq GCF_000316465.1-RS_2025_06_13 2025-06-13 5519 5040 97 na GCF_000316485.1 PRJNA224116 SAMN01041339 ANLP00000000.1 na 1005405 562 Escherichia coli 94.0618 strain=94.0618 na latest Scaffold Major Full 2012-12-12 ASM31648v1 Institute for Genome Sciences GCA_000316485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/485/GCF_000316485.1_ASM31648v1/ na na na haploid bacteria 5294250 5292633 50.500000 0 362 391 NCBI RefSeq GCF_000316485.1-RS_2025_06_13 2025-06-13 5518 5028 103 na GCF_000316505.2 PRJNA224116 SAMN01041350 ANMC00000000.1 na 1005420 562 Escherichia coli 97.0007 strain=97.0007 na latest Contig Minor Full 2012-12-04 ASM31650v2 Institute for Genome Sciences GCA_000316505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/505/GCF_000316505.2_ASM31650v2/ na na na haploid bacteria 5129079 5129079 50.500000 0 283 283 NCBI RefSeq GCF_000316505.2-RS_2025_07_10 2025-07-10 5284 4758 100 na GCF_000316515.1 PRJNA224116 SAMN02261330 na reference genome 292564 59930 Cyanobium gracile PCC 6307 strain=PCC 6307 na latest Complete Genome Major Full 2012-12-04 ASM31651v1 JGI GCA_000316515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/515/GCF_000316515.1_ASM31651v1/ na assembly from type material na haploid bacteria 3342364 3342364 68.500000 1 1 1 NCBI RefSeq GCF_000316515.1-RS_2026_05_02 2026-05-02 3429 3329 54 na GCF_000316545.2 PRJNA224116 SAMN01041354 ANME00000000.1 na 1005422 562 Escherichia coli 99.0678 strain=99.0678 na latest Contig Minor Full 2012-12-04 ASM31654v2 Institute for Genome Sciences GCA_000316545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/545/GCF_000316545.2_ASM31654v2/ na na na haploid bacteria 5192667 5192667 50.000000 0 148 148 NCBI RefSeq GCF_000316545.2-RS_2025_07_10 2025-07-10 5215 4827 81 na GCF_000316565.2 PRJNA224116 SAMN01041355 ANMF00000000.1 na 1005424 562 Escherichia coli 99.0713 strain=99.0713 na latest Contig Minor Full 2012-12-04 ASM31656v2 Institute for Genome Sciences GCA_000316565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/565/GCF_000316565.2_ASM31656v2/ na na na haploid bacteria 5217423 5217423 50.500000 0 120 120 NCBI RefSeq GCF_000316565.2-RS_2025_06_16 2025-06-16 5234 4833 95 na GCF_000316575.1 PRJNA224116 SAMN02261328 na na 99598 99598 Calothrix sp. PCC 7507 strain=PCC 7507 na latest Complete Genome Major Full 2012-12-04 ASM31657v1 JGI GCA_000316575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/575/GCF_000316575.1_ASM31657v1/ na na na haploid bacteria 7023215 7023215 42.000000 1 1 1 NCBI RefSeq GCF_000316575.1-RS_2024_08_13 2024-08-13 6133 5945 90 na GCF_000316605.1 PRJNA224116 SAMN02232033 na na 111781 111781 [Leptolyngbya] sp. PCC 7376 strain=PCC 7376 na latest Complete Genome Major Full 2012-12-04 ASM31660v1 DOE Joint Genome Institute GCA_000316605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/605/GCF_000316605.1_ASM31660v1/ na na na haploid bacteria 5125950 5125950 44.000000 1 1 1 NCBI RefSeq GCF_000316605.1-RS_2024_11_05 2024-11-05 4730 4395 57 na GCF_000316625.1 PRJNA224116 SAMN02261332 na na 317936 317936 Nostoc sp. PCC 7107 strain=PCC 7107 na latest Complete Genome Major Full 2012-12-04 ASM31662v1 JGI GCA_000316625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/625/GCF_000316625.1_ASM31662v1/ na na na haploid bacteria 6329823 6329823 40.500000 1 1 1 NCBI RefSeq GCF_000316625.1-RS_2024_07_22 2024-07-22 5531 5326 95 na GCF_000316645.1 PRJNA224116 SAMN02261333 na na 28072 28072 Nostoc sp. PCC 7524 strain=PCC 7524 na latest Complete Genome Major Full 2012-12-04 ASM31664v1 JGI GCA_000316645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/645/GCF_000316645.1_ASM31664v1/ na na na haploid bacteria 6718869 6718869 41.500000 3 3 3 NCBI RefSeq GCF_000316645.1-RS_2025_08_24 2025-08-24 5674 5481 87 na GCF_000316665.1 PRJNA224116 SAMN02232049 na na 373994 373994 Rivularia sp. PCC 7116 strain=PCC 7116 na latest Complete Genome Major Full 2012-12-04 ASM31666v1 DOE Joint Genome Institute GCA_000316665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/665/GCF_000316665.1_ASM31666v1/ na na na haploid bacteria 8728773 8728773 37.500000 3 3 3 NCBI RefSeq GCF_000316665.1-RS_2024_08_22 2024-08-22 6789 6620 68 na GCF_000316685.1 PRJNA224116 SAMN02261337 na na 195253 195253 Synechococcus sp. PCC 6312 strain=PCC 6312 na latest Complete Genome Major Full 2012-12-04 ASM31668v1 JGI GCA_000316685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/685/GCF_000316685.1_ASM31668v1/ na na na haploid bacteria 3720499 3720499 48.500000 2 2 2 NCBI RefSeq GCF_000316685.1-RS_2024_08_22 2024-08-22 3724 3624 48 na GCF_000316705.2 PRJNA224116 SAMN01041353 ANMD00000000.1 na 1005421 562 Escherichia coli 99.0672 strain=99.0672 na latest Scaffold Minor Full 2012-12-12 ASM31670v2 Institute for Genome Sciences GCA_000316705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/705/GCF_000316705.2_ASM31670v2/ na na na haploid bacteria 5389386 5387175 50.000000 0 488 526 NCBI RefSeq GCF_000316705.2-RS_2025_06_17 2025-06-17 5772 5203 103 na GCF_000316725.2 PRJNA224116 SAMN01041352 ANMA00000000.1 na 1005418 562 Escherichia coli 97.1742 strain=97.1742 na latest Scaffold Minor Full 2012-12-12 ASM31672v2 Institute for Genome Sciences GCA_000316725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/725/GCF_000316725.2_ASM31672v2/ na na na haploid bacteria 5121336 5121336 50.500000 0 345 345 NCBI RefSeq GCF_000316725.2-RS_2026_03_02 2026-03-02 5370 4702 93 na GCF_000316745.2 PRJNA224116 SAMN01041349 ANLZ00000000.1 na 1005416 562 Escherichia coli 97.0003 strain=97.0003 na latest Scaffold Minor Full 2012-12-13 ASM31674v2 Institute for Genome Sciences GCA_000316745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/745/GCF_000316745.2_ASM31674v2/ na na na haploid bacteria 5192601 5192401 50.000000 0 115 125 NCBI RefSeq GCF_000316745.2-RS_2025_06_15 2025-06-15 5189 4802 97 na GCF_000316765.2 PRJNA224116 SAMN01041343 ANLY00000000.1 na 1005415 562 Escherichia coli 96.0107 strain=96.0107 na latest Scaffold Minor Full 2012-12-12 ASM31676v2 Institute for Genome Sciences GCA_000316765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/765/GCF_000316765.2_ASM31676v2/ na na na haploid bacteria 5224909 5222828 50.500000 0 334 368 NCBI RefSeq GCF_000316765.2-RS_2025_06_15 2025-06-15 5384 4941 91 na GCF_000316785.2 PRJNA224116 SAMN01041348 ANLV00000000.1 na 1005412 562 Escherichia coli 96.0939 strain=96.0939 na latest Scaffold Minor Full 2012-12-12 ASM31678v2 Institute for Genome Sciences GCA_000316785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/785/GCF_000316785.2_ASM31678v2/ na na na haploid bacteria 5340716 5338103 50.500000 0 394 441 NCBI RefSeq GCF_000316785.2-RS_2025_06_15 2025-06-15 5640 5133 92 na GCF_000316805.2 PRJNA224116 SAMN01041347 ANLW00000000.1 na 1005413 562 Escherichia coli 96.0932 strain=96.0932 na latest Scaffold Minor Full 2012-12-12 ASM31680v2 Institute for Genome Sciences GCA_000316805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/805/GCF_000316805.2_ASM31680v2/ na na na haploid bacteria 5277399 5273517 50.500000 0 359 444 NCBI RefSeq GCF_000316805.2-RS_2025_06_15 2025-06-15 5501 4988 90 na GCF_000316825.2 PRJNA224116 SAMN01041345 ANLU00000000.1 na 1005411 562 Escherichia coli 96.0427 strain=96.0427 na latest Scaffold Minor Full 2012-12-12 ASM31682v2 Institute for Genome Sciences GCA_000316825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/825/GCF_000316825.2_ASM31682v2/ na na na haploid bacteria 5336156 5333874 50.500000 0 494 533 NCBI RefSeq GCF_000316825.2-RS_2025_06_16 2025-06-16 5639 5116 98 na GCF_000316845.2 PRJNA224116 SAMN01041340 ANLQ00000000.1 na 1005406 562 Escherichia coli 95.0183 strain=95.0183 na latest Scaffold Minor Full 2012-12-12 ASM31684v2 Institute for Genome Sciences GCA_000316845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/845/GCF_000316845.2_ASM31684v2/ na na na haploid bacteria 5410921 5402484 50.500000 0 433 581 NCBI RefSeq GCF_000316845.2-RS_2025_06_16 2025-06-16 5818 5236 98 na GCF_000316865.2 PRJNA224116 SAMN01041342 ANLR00000000.1 na 1005407 562 Escherichia coli 95.1288 strain=95.1288 na latest Scaffold Minor Full 2012-12-12 ASM31686v2 Institute for Genome Sciences GCA_000316865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/865/GCF_000316865.2_ASM31686v2/ na na na haploid bacteria 5188907 5184631 50.500000 0 578 674 NCBI RefSeq GCF_000316865.2-RS_2025_06_15 2025-06-15 5488 4918 96 na GCF_000316885.2 PRJNA224116 SAMN01041341 ANLS00000000.1 na 1005408 562 Escherichia coli 95.0943 strain=95.0943 na latest Scaffold Minor Full 2012-12-12 ASM31688v2 Institute for Genome Sciences GCA_000316885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/885/GCF_000316885.2_ASM31688v2/ na na na haploid bacteria 5375956 5373251 50.500000 0 389 454 NCBI RefSeq GCF_000316885.2-RS_2025_06_15 2025-06-15 5632 5101 103 na GCF_000316905.2 PRJNA224116 SAMN01041346 ANLT00000000.1 na 1005410 562 Escherichia coli 96.0428 strain=96.0428 na latest Scaffold Minor Full 2012-12-12 ASM31690v2 Institute for Genome Sciences GCA_000316905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/905/GCF_000316905.2_ASM31690v2/ na na na haploid bacteria 5211464 5208973 50.500000 0 293 344 NCBI RefSeq GCF_000316905.2-RS_2025_06_16 2025-06-16 5366 4921 88 na GCF_000316945.1 PRJNA224116 SAMN02470874 ANBY00000000.1 na 1234593 1234593 Staphylococcus sp. E463 strain=E463 na latest Contig Major Full 2012-12-04 E463 San Diego State University GCA_000316945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/945/GCF_000316945.1_E463/ na na na haploid bacteria 2486777 2486777 31.500000 0 118 118 NCBI RefSeq GCF_000316945.1-RS_2025_08_25 2025-08-25 2506 2342 69 na GCF_000316965.1 PRJNA224116 SAMN02470875 ANBZ00000000.1 na 1234594 1234594 Pseudomonas sp. 313 strain=313 na latest Contig Major Full 2012-12-04 313 San Diego State University GCA_000316965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/965/GCF_000316965.1_313/ na na na haploid bacteria 5203017 5203017 65.500000 0 110 110 NCBI RefSeq GCF_000316965.1-RS_2024_08_21 2024-08-21 4911 4686 68 na GCF_000316985.1 PRJNA224116 SAMN02470877 ANBW00000000.1 na 1234362 1234362 Vibrio sp. 624788 strain=624788 na latest Contig Major Full 2012-12-04 Draft San Diego State University GCA_000316985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/316/985/GCF_000316985.1_Draft/ na na na haploid bacteria 5467904 5467904 44.500000 0 400 400 NCBI RefSeq GCF_000316985.1-RS_2024_05_24 2024-05-24 5039 4409 55 na GCF_000317005.1 PRJNA224116 SAMN02470229 AMZI00000000.1 na 1235479 1235479 Pelosinus sp. HCF1 strain=HCF1 na latest Contig Major Full 2012-12-05 Hcf1DRAFT LBNL Sustainable Systems Scientific Focus Area GCA_000317005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/005/GCF_000317005.1_Hcf1DRAFT/ na na na haploid bacteria 4971015 4971015 40.000000 0 208 208 NCBI RefSeq GCF_000317005.1-RS_2024_08_13 2024-08-13 4732 4614 69 23064329 GCF_000317025.1 PRJNA224116 SAMN02261346 na na 118163 118163 Pleurocapsa sp. PCC 7327 strain=PCC 7327 na latest Complete Genome Major Full 2012-12-05 ASM31702v1 JGI GCA_000317025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/025/GCF_000317025.1_ASM31702v1/ na na na haploid bacteria 4986817 4986817 45.000000 1 1 1 NCBI RefSeq GCF_000317025.1-RS_2024_08_22 2024-08-22 4614 4367 55 na GCF_000317045.1 PRJNA224116 SAMN02261348 na na 1173025 1173025 Geitlerinema sp. PCC 7407 strain=PCC 7407 na latest Complete Genome Major Full 2012-12-05 ASM31704v1 JGI GCA_000317045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/045/GCF_000317045.1_ASM31704v1/ na na na haploid bacteria 4681111 4681111 58.500000 1 1 1 NCBI RefSeq GCF_000317045.1-RS_2024_11_05 2024-11-05 3926 3843 61 na GCF_000317065.1 PRJNA224116 SAMN02261336 na reference genome 82654 3457544 Thalassoporum mexicanum PCC 7367 strain=PCC 7367 na latest Complete Genome Major Full 2012-12-05 ASM31706v1 JGI GCA_000317065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/065/GCF_000317065.1_ASM31706v1/ na assembly from type material na haploid bacteria 4885680 4885680 46.000000 2 2 2 NCBI RefSeq GCF_000317065.1-RS_2026_02_01 2026-02-01 3992 3892 56 na GCF_000317085.1 PRJNA224116 SAMN02261356 na reference genome 1173263 3687901 Pseudanabaenococcus habilitatus PCC 7502 strain=PCC 7502 na latest Complete Genome Major Full 2012-12-05 ASM31708v1 JGI GCA_000317085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/085/GCF_000317085.1_ASM31708v1/ na na na haploid bacteria 3583735 3583735 40.500000 3 3 3 NCBI RefSeq GCF_000317085.1-RS_2026_02_28 2026-02-28 3756 3617 53 na GCF_000317105.1 PRJNA224116 SAMN02261334 na reference genome 56110 118323 Oxynema acuminatum PCC 6304 strain=PCC 6304 na latest Complete Genome Major Full 2012-12-05 ASM31710v1 JGI GCA_000317105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/105/GCF_000317105.1_ASM31710v1/ na assembly from type material na haploid bacteria 7804270 7804270 47.500000 3 3 3 NCBI RefSeq GCF_000317105.1-RS_2026_06_07 2026-06-07 6154 6002 80 na GCF_000317125.1 PRJNA224116 SAMN02261359 na reference genome 251229 54299 Chroococcidiopsis thermalis PCC 7203 strain=PCC 7203 na latest Complete Genome Major Full 2012-12-05 ASM31712v1 JGI GCA_000317125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/125/GCF_000317125.1_ASM31712v1/ na assembly from type material na haploid bacteria 6689401 6689401 44.500000 3 3 3 NCBI RefSeq GCF_000317125.1-RS_2026_05_02 2026-05-02 6242 6044 59 na GCF_000317145.1 PRJNA224116 SAMN02261345 na reference genome 1173020 1173032 Chamaesiphon minutus PCC 6605 strain=PCC 6605 na latest Chromosome Major Full 2012-12-05 ASM31714v1 JGI GCA_000317145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/145/GCF_000317145.1_ASM31714v1/ na assembly from type material na haploid bacteria 6761765 6761665 45.500000 3 3 4 NCBI RefSeq GCF_000317145.1-RS_2026_04_07 2026-04-07 6521 6267 69 na GCF_000317165.1 PRJNA224116 SAMN02469940 ANAG00000000.1 na 1227363 228229 Ligilactobacillus saerimneri 30a strain=30a na latest Contig Major Full 2012-12-05 O1P2RL8 Institut des Sciences de la Vigne et du Vin GCA_000317165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/165/GCF_000317165.1_O1P2RL8/ na na na haploid bacteria 1633986 1633986 42.500000 0 22 22 NCBI RefSeq GCF_000317165.1-RS_2026_04_01 2026-04-01 1616 1526 67 23405290 GCF_000317205.1 PRJNA224116 SAMN02469884 AJLK00000000.1 reference genome 306281 92938 Fischerella muscicola PCC 7414 strain=PCC 7414 na latest Contig Major Full 2012-12-05 FisPCC7414_1.0 Heinrich-Heine-University Duesseldorf GCA_000317205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/205/GCF_000317205.1_FisPCC7414_1.0/ na assembly from type material na haploid bacteria 6902954 6902954 41.500000 0 271 271 NCBI RefSeq GCF_000317205.1-RS_2025_12_16 2025-12-16 6224 5894 65 23221676 GCF_000317225.1 PRJNA224116 SAMN02469885 AJLL00000000.1 reference genome 98439 372787 Fischerella thermalis PCC 7521 strain=PCC 7521 na latest Contig Major Full 2012-12-05 FisPCC7521_1.0 Heinrich-Heine-University Duesseldorf GCA_000317225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/225/GCF_000317225.1_FisPCC7521_1.0/ na assembly from type material na haploid bacteria 5438272 5438272 41.000000 0 141 141 NCBI RefSeq GCF_000317225.1-RS_2026_04_14 2026-04-14 4700 4481 50 23221676 GCF_000317265.1 PRJNA224116 SAMN02469882 AJLM00000000.1 na 184925 1124 Chlorogloeopsis fritschii PCC 9212 strain=PCC 9212 na latest Contig Major Full 2012-12-05 ChlPCC9212_1.0 Heinrich-Heine-University Duesseldorf GCA_000317265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/265/GCF_000317265.1_ChlPCC9212_1.0/ na na na haploid bacteria 7649851 7649851 41.500000 0 188 188 NCBI RefSeq GCF_000317265.1-RS_2026_01_23 2026-01-23 6874 6693 52 23221676 GCF_000317285.1 PRJNA224116 SAMN02469883 AJLN00000000.1 reference genome 211165 1124 Chlorogloeopsis fritschii PCC 6912 strain=PCC 6912 na latest Contig Major Full 2012-12-05 ChlPCC6912_1.0 HHU Duesseldorf GCA_000317285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/285/GCF_000317285.1_ChlPCC6912_1.0/ na assembly from type material na haploid bacteria 7751745 7751745 41.500000 0 161 161 NCBI RefSeq GCF_000317285.1-RS_2026_04_07 2026-04-07 6971 6779 52 23221676 GCF_000317305.3 PRJNA224116 SAMN02641502 na reference genome 700508 1795 Mycolicibacterium neoaurum VKM Ac-1815D strain=VKM Ac-1815D na latest Complete Genome Major Full 2014-08-26 ASM31730v3 Laboratory of microbiological transformation of organic compounds, G.K.Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences GCA_000317305.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/305/GCF_000317305.3_ASM31730v3/ na na na haploid bacteria 5421267 5421267 67.000000 1 1 1 NCBI RefSeq GCF_000317305.3-RS_2025_12_09 2025-12-09 5156 5070 55 24435872 GCF_000317395.1 PRJNA224116 SAMN02469330 ANHV00000000.1 na 1258580 562 Escherichia coli LCT-EC59 strain=LCT-EC59 na latest Scaffold Major Full 2012-12-07 genome assembly of LCT-EC59 strain of E.coli Beijing Genomics Institute GCA_000317395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/395/GCF_000317395.1_genome_assembly_of_LCT-EC59_strain_of_E.coli/ na na na haploid bacteria 5221777 5099218 50.500000 0 33 175 NCBI RefSeq GCF_000317395.1-RS_2025_06_09 2025-06-09 5044 4697 81 23469355 GCF_000317435.1 PRJNA224116 SAMN02261327 na na 1170562 1170562 Calothrix sp. PCC 6303 strain=PCC 6303 na latest Complete Genome Major Full 2012-12-06 ASM31743v1 JGI GCA_000317435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/435/GCF_000317435.1_ASM31743v1/ na na na haploid bacteria 6960392 6960392 40.000000 4 4 4 NCBI RefSeq GCF_000317435.1-RS_2025_02_14 2025-02-14 5791 5599 59 na GCF_000317475.1 PRJNA224116 SAMN02261335 na reference genome 179408 482564 Phormidium nigroviride PCC 7112 strain=PCC 7112 na latest Complete Genome Major Full 2012-12-06 ASM31747v1 JGI GCA_000317475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/475/GCF_000317475.1_ASM31747v1/ na assembly from type material na haploid bacteria 8272254 8272254 46.000000 6 6 6 NCBI RefSeq GCF_000317475.1-RS_2025_09_21 2025-09-21 7063 6776 85 na GCF_000317495.1 PRJNA224116 SAMN02261349 na reference genome 1173022 241425 Crinalium epipsammum PCC 9333 strain=PCC 9333 na latest Complete Genome Major Full 2012-12-06 ASM31749v1 JGI GCA_000317495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/495/GCF_000317495.1_ASM31749v1/ na na na haploid bacteria 5620407 5620407 40.000000 9 9 9 NCBI RefSeq GCF_000317495.1-RS_2025_11_20 2025-11-20 5096 4870 58 na GCF_000317515.1 PRJNA224116 SAMN02261351 na reference genome 1173027 2886352 Allocoleopsis franciscana PCC 7113 strain=PCC 7113 na latest Complete Genome Major Full 2012-12-06 ASM31751v1 JGI GCA_000317515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/515/GCF_000317515.1_ASM31751v1/ na assembly from type material na haploid bacteria 7966510 7966510 46.000000 9 9 9 NCBI RefSeq GCF_000317515.1-RS_2025_11_20 2025-11-20 6797 6531 87 34289106 GCF_000317535.1 PRJNA224116 SAMN02261342 na reference genome 56107 142864 Cylindrospermum stagnale PCC 7417 strain=PCC 7417 na latest Chromosome Major Full 2012-12-06 ASM31753v1 JGI GCA_000317535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/535/GCF_000317535.1_ASM31753v1/ na assembly from type material na haploid bacteria 7610589 7610389 42.000000 4 4 6 NCBI RefSeq GCF_000317535.1-RS_2026_05_02 2026-05-02 6600 6332 90 na GCF_000317555.1 PRJNA224116 SAMN02261347 na na 1173026 1173026 Gloeocapsa sp. PCC 7428 strain=PCC 7428 na latest Complete Genome Major Full 2012-12-06 ASM31755v1 JGI GCA_000317555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/555/GCF_000317555.1_ASM31755v1/ na na na haploid bacteria 5882710 5882710 43.500000 5 5 5 NCBI RefSeq GCF_000317555.1-RS_2024_08_13 2024-08-13 5297 5153 51 na GCF_000317575.1 PRJNA224116 SAMN02261352 na reference genome 111780 102116 Stanieria cyanosphaera PCC 7437 strain=PCC 7437 na latest Complete Genome Major Full 2012-12-06 ASM31757v1 JGI GCA_000317575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/575/GCF_000317575.1_ASM31757v1/ na assembly from type material na haploid bacteria 5544990 5544990 36.000000 6 6 6 NCBI RefSeq GCF_000317575.1-RS_2025_12_09 2025-12-09 5049 4860 55 na GCF_000317595.1 PRJNA224116 SAMN02436560 AEJC00000000.1 na 698759 103232 Streptomyces ipomoeae 91-03 strain=91-03 na latest Contig Major Full 2012-12-06 Sipom9103v1.0 J. Craig Venter Institute GCA_000317595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/595/GCF_000317595.1_Sipom9103v1.0/ na na na haploid bacteria 10403856 10403856 70.000000 0 687 687 NCBI RefSeq GCF_000317595.1-RS_2026_01_15 2026-01-15 9282 8693 97 na GCF_000317615.1 PRJNA224116 SAMN02261331 na reference genome 13035 292566 Dactylococcopsis salina PCC 8305 strain=PCC 8305 na latest Complete Genome Major Full 2012-12-07 ASM31761v1 JGI GCA_000317615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/615/GCF_000317615.1_ASM31761v1/ na assembly from type material na haploid bacteria 3781008 3781008 42.500000 1 1 1 NCBI RefSeq GCF_000317615.1-RS_2025_12_13 2025-12-13 3822 3651 55 na GCF_000317635.1 PRJNA224116 SAMN02232029 na na 65093 65093 Halothece sp. PCC 7418 strain=PCC 7418 na latest Complete Genome Major Full 2012-12-07 ASM31763v1 DOE Joint Genome Institute GCA_000317635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/635/GCF_000317635.1_ASM31763v1/ na na na haploid bacteria 4179170 4179170 43.000000 1 1 1 NCBI RefSeq GCF_000317635.1-RS_2024_11_05 2024-11-05 3953 3826 59 na GCF_000317675.1 PRJNA224116 SAMN02261329 na reference genome 755178 379064 Cyanobacterium aponinum PCC 10605 strain=PCC 10605 na latest Complete Genome Major Full 2012-12-07 ASM31767v1 JGI GCA_000317675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/675/GCF_000317675.1_ASM31767v1/ na assembly from type material na haploid bacteria 4176973 4176973 35.000000 2 2 2 NCBI RefSeq GCF_000317675.1-RS_2025_08_19 2025-08-19 3601 3487 56 na GCF_000317695.1 PRJNA224116 SAMN02232008 na reference genome 272123 1165 Anabaena cylindrica PCC 7122 strain=PCC 7122 na latest Complete Genome Major Full 2012-12-07 ASM31769v1 DOE Joint Genome Institute GCA_000317695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/695/GCF_000317695.1_ASM31769v1/ na assembly from type material na haploid bacteria 7063285 7063285 39.000000 7 7 7 NCBI RefSeq GCF_000317695.1-RS_2026_04_26 2026-04-26 6195 5946 83 na GCF_000317795.1 PRJNA224116 SAMN02261426 na reference genome 1056495 200415 Caldisphaera lagunensis DSM 15908 strain=DSM 15908 na latest Complete Genome Major Full 2012-12-10 ASM31779v1 JGI GCA_000317795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/795/GCF_000317795.1_ASM31779v1/ na assembly from type material na haploid archaea 1546846 1546846 30.000000 1 1 1 NCBI RefSeq GCF_000317795.1-RS_2026_05_02 2026-05-02 1573 1517 51 na GCF_000317835.1 PRJNA224116 SAMN02261392 na reference genome 937777 432329 Deinococcus peraridilitoris DSM 19664 strain=DSM 19664 na latest Complete Genome Major Full 2012-12-10 ASM31783v1 JGI GCA_000317835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/835/GCF_000317835.1_ASM31783v1/ na assembly from type material na haploid bacteria 4513714 4513714 63.500000 3 3 3 NCBI RefSeq GCF_000317835.1-RS_2026_05_02 2026-05-02 4456 4326 63 na GCF_000317855.1 PRJNA224116 SAMEA3138428 na na 759913 1334 Streptococcus dysgalactiae subsp. equisimilis AC-2713 strain=AC-2713 na latest Complete Genome Major Full 2012-10-31 ASM31785v1 DWI an der RWTH Aachen e. V. GCA_000317855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/855/GCF_000317855.1_ASM31785v1/ na na na haploid bacteria 2179445 2179445 39.500000 1 1 1 NCBI RefSeq GCF_000317855.1-RS_2026_05_15 2026-05-15 2148 1950 76 na GCF_000317875.1 PRJNA224116 SAMN02604324 na na 1055532 210 Helicobacter pylori Aklavik86 strain=Aklavik86 na latest Complete Genome Major Full 2012-11-26 ASM31787v1 Washington University Medical School GCA_000317875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/875/GCF_000317875.1_ASM31787v1/ na na na haploid bacteria 1507930 1507930 39.000000 3 3 3 NCBI RefSeq GCF_000317875.1-RS_2026_01_23 2026-01-23 1456 1356 45 25883278 GCF_000317895.1 PRJNA224116 SAMN02604232 na na 1069642 959 Bdellovibrio bacteriovorus str. Tiberius strain=Tiberius na latest Complete Genome Major Full 2012-11-28 ASM31789v1 University of Nottingham GCA_000317895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/895/GCF_000317895.1_ASM31789v1/ na na na haploid bacteria 3988594 3988594 50.000000 1 1 1 NCBI RefSeq GCF_000317895.1-RS_2025_08_25 2025-08-25 3793 3741 45 23181807 GCF_000317915.1 PRJNA224116 SAMEA2272087 na na 1261557 1351 Enterococcus faecalis str. Symbioflor 1 strain=Symbioflor 1 na latest Complete Genome Major Full 2012-12-03 ASM31791v1 JLU GCA_000317915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/915/GCF_000317915.1_ASM31791v1/ na na na haploid bacteria 2810675 2810675 37.500000 1 1 1 NCBI RefSeq GCF_000317915.1-RS_2026_02_11 2026-02-11 2762 2630 79 na GCF_000317935.1 PRJNA224116 SAMEA2272448 na na 1208660 519 Bordetella parapertussis Bpp5 strain=Bpp5 na latest Complete Genome Major Full 2012-10-08 ASM31793v1 WTSI GCA_000317935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/935/GCF_000317935.1_ASM31793v1/ na na na haploid bacteria 4899574 4899574 68.000000 2 2 2 NCBI RefSeq GCF_000317935.1-RS_2026_02_11 2026-02-11 4736 4375 67 23051057 GCF_000317955.1 PRJNA224116 SAMEA2272800 na na 1208658 518 Bordetella bronchiseptica MO149 strain=MO149 na latest Complete Genome Major Full 2012-10-08 ASM31795v1 WTSI GCA_000317955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/955/GCF_000317955.1_ASM31795v1/ na na na haploid bacteria 5091817 5091817 68.500000 1 1 1 NCBI RefSeq GCF_000317955.1-RS_2026_02_11 2026-02-11 4777 4699 67 23051057 GCF_000317975.2 PRJNA224116 SAMEA2272423 na na 1234679 2751 Carnobacterium maltaromaticum LMA28 strain=LMA28 na latest Complete Genome Major Full 2013-05-30 ASM31797v2 LIBio GCA_000317975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/975/GCF_000317975.2_ASM31797v2/ na na na haploid bacteria 3650416 3650416 34.500000 1 1 1 NCBI RefSeq GCF_000317975.2-RS_2026_02_11 2026-02-11 3505 3349 81 23405327 GCF_000317995.1 PRJNA224116 SAMEA2272414 na na 1221877 83554 Chlamydia psittaci 01DC12 strain=01DC12 na latest Chromosome Major Full 2012-11-05 ASM31799v1 Moredun Research Institute GCA_000317995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/317/995/GCF_000317995.1_ASM31799v1/ na na na haploid bacteria 1178564 1175965 39.000000 2 2 3 NCBI RefSeq GCF_000317995.1-RS_2026_02_11 2026-02-11 1032 974 44 na GCF_000318015.1 PRJNA224116 SAMEA2272388 na na 568707 518 Bordetella bronchiseptica 253 strain=253 na latest Complete Genome Major Full 2012-10-11 ASM31801v1 WTSI GCA_000318015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/015/GCF_000318015.1_ASM31801v1/ na na na haploid bacteria 5264383 5264383 68.000000 1 1 1 NCBI RefSeq GCF_000318015.1-RS_2026_02_11 2026-02-11 5042 4942 67 23051057 GCF_000318055.1 PRJNA224116 SAMEA2272544 na na 1230340 1639 Listeria monocytogenes serotype 4b str. LL195 strain=LL195 na latest Complete Genome Major Full 2012-11-21 ASM31805v1 University of Vienna GCA_000318055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/055/GCF_000318055.1_ASM31805v1/ na na na haploid bacteria 2904662 2904662 38.000000 1 1 1 NCBI RefSeq GCF_000318055.1-RS_2025_03_16 2025-03-16 2893 2775 89 na GCF_000318075.1 PRJNA224116 SAMN02470610 AIJR00000000.1 na 693743 666 Vibrio cholerae PS15 strain=PS15 na latest Contig Major Full 2012-12-10 Vibrio cholerae PS15 National Center for Genome Resources GCA_000318075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/075/GCF_000318075.1_Vibrio_cholerae_PS15/ na na na haploid bacteria 3910387 3910387 47.500000 0 131 131 NCBI RefSeq GCF_000318075.1-RS_2026_01_12 2026-01-12 3482 3418 35 23409261 GCF_000318095.2 PRJNA224116 SAMN02436797 AMEK00000000.1 na 1035197 712469 Alloprevotella sp. oral taxon 473 str. F0040 strain=F0040 na latest Scaffold Minor Full 2013-01-29 ASM31809v2 Washington University Genome Center GCA_000318095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/095/GCF_000318095.2_ASM31809v2/ na na na haploid bacteria 2553017 2551717 46.000000 0 24 89 NCBI RefSeq GCF_000318095.2-RS_2025_01_08 2025-01-08 1929 1832 55 na GCF_000318115.1 PRJNA224116 SAMN02436860 AMEL00000000.1 na 1035196 1261 Peptostreptococcus anaerobius VPI 4330 = DSM 2949 strain=VPI 4330 na latest Scaffold Major Full 2013-01-29 ASM31811v1 Washington University Genome Center GCA_000318115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/115/GCF_000318115.1_ASM31811v1/ na assembly from type material na haploid bacteria 1988451 1988071 36.000000 0 91 110 NCBI RefSeq GCF_000318115.1-RS_2026_04_21 2026-04-21 1889 1784 34 na GCF_000318135.1 PRJNA224116 SAMN02436928 AMEM00000000.1 na 1035195 61592 Corynebacterium durum F0235 strain=F0235 na latest Scaffold Major Full 2013-01-29 ASM31813v1 Washington University Genome Center GCA_000318135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/135/GCF_000318135.1_ASM31813v1/ na na na haploid bacteria 2809576 2809096 57.000000 0 20 44 NCBI RefSeq GCF_000318135.1-RS_2026_02_08 2026-02-08 2598 2505 58 na GCF_000318155.1 PRJNA224116 SAMN02436929 AMEN00000000.1 na 1035194 714 Aggregatibacter actinomycetemcomitans Y4 strain=Y4 na latest Scaffold Major Full 2013-01-29 ASM31815v1 Washington University Genome Center GCA_000318155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/155/GCF_000318155.1_ASM31815v1/ na na na haploid bacteria 2186501 2185821 44.500000 0 87 121 NCBI RefSeq GCF_000318155.1-RS_2026_01_30 2026-01-30 2168 1977 51 na GCF_000318175.2 PRJNA224116 SAMN02436930 AMEO00000000.1 na 1127695 712532 Selenomonas sp. oral taxon 138 str. F0429 strain=F0429 na latest Scaffold Minor Full 2013-01-29 ASM31817v2 Washington University GCA_000318175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/175/GCF_000318175.2_ASM31817v2/ na na na haploid bacteria 2384529 2381914 57.000000 0 33 116 NCBI RefSeq GCF_000318175.2-RS_2024_08_13 2024-08-13 2365 2247 66 na GCF_000318195.2 PRJNA224116 SAMN02436685 AMEP00000000.1 na 1127699 633701 Hoylesella saccharolytica F0055 strain=F0055 na latest Scaffold Minor Full 2013-01-29 ASM31819v2 Washington University GCA_000318195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/195/GCF_000318195.2_ASM31819v2/ na na na haploid bacteria 2853490 2851590 43.000000 0 71 166 NCBI RefSeq GCF_000318195.2-RS_2025_09_13 2025-09-13 2260 2145 54 na GCF_000318215.2 PRJNA224116 SAMN02436931 AMEQ00000000.1 na 1127696 41976 Porphyromonas catoniae F0037 strain=F0037 na latest Scaffold Minor Full 2013-01-29 ASM31821v2 Washington University GCA_000318215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/215/GCF_000318215.2_ASM31821v2/ na na na haploid bacteria 2101485 2100985 51.000000 0 18 43 NCBI RefSeq GCF_000318215.2-RS_2026_03_31 2026-03-31 1692 1626 53 na GCF_000318235.2 PRJNA224116 SAMN02436686 AMER00000000.1 na 1127694 712401 Neisseria sp. oral taxon 020 str. F0370 strain=F0370 na latest Scaffold Minor Full 2013-01-29 ASM31823v2 Washington University GCA_000318235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/235/GCF_000318235.2_ASM31823v2/ na na na haploid bacteria 2358903 2356454 58.500000 0 118 226 NCBI RefSeq GCF_000318235.2-RS_2024_08_13 2024-08-13 2395 2279 46 na GCF_000318255.2 PRJNA224116 SAMN02436932 AMES00000000.1 na 1127693 712217 Capnocytophaga sp. oral taxon 380 str. F0488 strain=F0488 na latest Scaffold Minor Full 2013-01-29 ASM31825v2 Washington University GCA_000318255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/255/GCF_000318255.2_ASM31825v2/ na na na haploid bacteria 2634285 2631765 39.500000 0 76 202 NCBI RefSeq GCF_000318255.2-RS_2024_08_13 2024-08-13 2257 2185 43 na GCF_000318275.2 PRJNA224116 SAMN02436794 AMET00000000.1 na 1127692 712213 Capnocytophaga sp. oral taxon 332 str. F0381 strain=F0381 na latest Scaffold Minor Full 2013-01-29 ASM31827v2 Washington University GCA_000318275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/275/GCF_000318275.2_ASM31827v2/ na na na haploid bacteria 2656035 2652935 38.500000 0 103 258 NCBI RefSeq GCF_000318275.2-RS_2024_08_13 2024-08-13 2573 2447 43 na GCF_000318295.1 PRJNA224116 SAMN02436687 AMEU00000000.1 na 1035193 712212 Capnocytophaga sp. oral taxon 326 str. F0382 strain=F0382 na latest Scaffold Major Full 2013-01-29 ASM31829v1 Washington University Genome Center GCA_000318295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/295/GCF_000318295.1_ASM31829v1/ na na na haploid bacteria 3218123 3215823 38.500000 0 127 242 NCBI RefSeq GCF_000318295.1-RS_2024_08_12 2024-08-12 3087 2939 47 na GCF_000318315.2 PRJNA224116 SAMN02436688 AMEV00000000.1 na 1127691 712211 Capnocytophaga sp. oral taxon 324 str. F0483 strain=F0483 na latest Scaffold Minor Full 2013-01-29 ASM31831v2 Washington University GCA_000318315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/315/GCF_000318315.2_ASM31831v2/ na na na haploid bacteria 2739607 2736902 39.500000 0 63 166 NCBI RefSeq GCF_000318315.2-RS_2024_08_14 2024-08-14 2353 2281 46 na GCF_000318335.2 PRJNA224116 SAMN02436933 AMEW00000000.1 na 1127690 712121 Actinomyces sp. oral taxon 181 str. F0379 strain=F0379 na latest Scaffold Minor Full 2013-01-29 ASM31833v2 Washington University GCA_000318335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/335/GCF_000318335.2_ASM31833v2/ na na na haploid bacteria 1901306 1900966 56.000000 0 14 31 NCBI RefSeq GCF_000318335.2-RS_2025_03_25 2025-03-25 1690 1619 54 na GCF_000318355.2 PRJNA224116 SAMN02436795 AMEX00000000.1 na 1128111 39777 Veillonella atypica KON strain=KON na latest Scaffold Minor Full 2013-01-29 ASM31835v2 Washington University GCA_000318355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/355/GCF_000318355.2_ASM31835v2/ na assembly from type material na haploid bacteria 1997160 1996295 39.000000 0 40 67 NCBI RefSeq GCF_000318355.2-RS_2026_04_07 2026-04-07 1908 1837 46 na GCF_000318425.2 PRJNA224116 SAMN01041344 ANLX00000000.1 na 1005414 562 Escherichia coli 96.0109 strain=96.0109 na latest Scaffold Minor Full 2012-12-12 ASM31842v2 Institute for Genome Sciences GCA_000318425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/425/GCF_000318425.2_ASM31842v2/ na na na haploid bacteria 5368484 5365981 50.500000 0 568 622 NCBI RefSeq GCF_000318425.2-RS_2025_06_17 2025-06-17 5748 5196 101 na GCF_000318445.2 PRJNA224116 SAMN01041351 ANMB00000000.1 na 1005419 562 Escherichia coli 97.0010 strain=97.001 na latest Scaffold Minor Full 2012-12-12 ASM31844v2 Institute for Genome Sciences GCA_000318445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/445/GCF_000318445.2_ASM31844v2/ na na na haploid bacteria 5338749 5336573 50.500000 0 712 752 NCBI RefSeq GCF_000318445.2-RS_2025_02_11 2025-02-11 5777 5166 94 na GCF_000318485.2 PRJNA224116 SAMN02435825 AGVA00000000.2 na 991931 666 Vibrio cholerae HC-7A1 strain=HC-7A1 na latest Contig Major Full 2013-01-23 ASM31848v2 Institute for Genome Sciences GCA_000318485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/485/GCF_000318485.2_ASM31848v2/ na na na haploid bacteria 4074920 4074920 47.500000 0 12 12 NCBI RefSeq GCF_000318485.2-RS_2026_04_21 2026-04-21 3756 3578 128 na GCF_000318505.2 PRJNA224116 SAMN02435810 AGVC00000000.2 na 991936 666 Vibrio cholerae HC-81A1 strain=HC-81A1 na latest Contig Major Full 2013-01-23 ASM31850v2 Institute for Genome Sciences GCA_000318505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/505/GCF_000318505.2_ASM31850v2/ na na na haploid bacteria 4084020 4084020 47.500000 0 16 16 NCBI RefSeq GCF_000318505.2-RS_2026_04_21 2026-04-21 3762 3584 127 na GCF_000318525.1 PRJNA224116 SAMEA2272666 na na 1071753 813 Chlamydia trachomatis A/363 strain=A/363 na latest Complete Genome Major Full 2012-03-30 ASM31852v2 Sanger Institute GCA_000318525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/525/GCF_000318525.1_ASM31852v2/ na na na haploid bacteria 1051528 1051528 41.500000 2 2 2 NCBI RefSeq GCF_000318525.1-RS_2025_07_02 2025-07-02 956 889 46 22406642 GCF_000318545.1 PRJNA224116 SAMEA2272284 na na 1071754 813 Chlamydia trachomatis A/5291 strain=A/5291 na latest Chromosome Major Full 2012-03-13 ASM31854v1 Sanger Institute GCA_000318545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/545/GCF_000318545.1_ASM31854v1/ na na na haploid bacteria 1051525 1051508 41.500000 2 2 3 NCBI RefSeq GCF_000318545.1-RS_2025_07_01 2025-07-01 956 889 46 22406642 GCF_000318565.1 PRJNA224116 SAMEA2272774 na na 1071755 813 Chlamydia trachomatis A/7249 strain=A/7249 na latest Complete Genome Major Full 2012-03-13 ASM31856v1 Sanger Institute GCA_000318565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/565/GCF_000318565.1_ASM31856v1/ na na na haploid bacteria 1051879 1051879 41.500000 2 2 2 NCBI RefSeq GCF_000318565.1-RS_2025_07_01 2025-07-01 956 888 46 22406642 GCF_000318585.1 PRJNA224116 SAMEA2272791 na na 1071756 813 Chlamydia trachomatis D/SotonD1 strain=D/SotonD1 na latest Chromosome Major Full 2012-03-15 ASM31858v1 Sanger Institute GCA_000318585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/585/GCF_000318585.1_ASM31858v1/ na na na haploid bacteria 1050078 1049824 41.500000 2 2 7 NCBI RefSeq GCF_000318585.1-RS_2025_07_01 2025-07-01 960 901 46 22406642 GCF_000318605.1 PRJNA224116 SAMEA2272062 na na 1071757 813 Chlamydia trachomatis D/SotonD5 strain=D/SotonD5 na latest Chromosome Major Full 2012-03-13 ASM31860v1 Sanger Institute GCA_000318605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/605/GCF_000318605.1_ASM31860v1/ na na na haploid bacteria 1049632 1049488 41.500000 2 2 3 NCBI RefSeq GCF_000318605.1-RS_2025_07_01 2025-07-01 959 909 46 22406642 GCF_000318625.1 PRJNA224116 SAMEA2272565 na na 1071758 813 Chlamydia trachomatis D/SotonD6 strain=D/SotonD6 na latest Chromosome Major Full 2012-03-13 ASM31862v1 Sanger Institute GCA_000318625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/625/GCF_000318625.1_ASM31862v1/ na na na haploid bacteria 1050053 1049986 41.500000 2 2 6 NCBI RefSeq GCF_000318625.1-RS_2025_07_02 2025-07-02 961 908 46 22406642 GCF_000318645.1 PRJNA224116 SAMEA2272184 na na 596777 813 Chlamydia trachomatis E/Bour strain=E/Bour na latest Complete Genome Major Full 2012-03-13 ASM31864v1 Sanger Institute GCA_000318645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/645/GCF_000318645.1_ASM31864v1/ na na na haploid bacteria 1050091 1050091 41.500000 2 2 2 NCBI RefSeq GCF_000318645.1-RS_2025_07_01 2025-07-01 960 898 46 22406642 GCF_000318665.1 PRJNA224116 SAMEA2272732 na na 1071760 813 Chlamydia trachomatis E/SotonE4 strain=E/SotonE4 na latest Chromosome Major Full 2012-03-13 ASM31866v1 Sanger Institute GCA_000318665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/665/GCF_000318665.1_ASM31866v1/ na na na haploid bacteria 1050127 1050023 41.500000 2 2 4 NCBI RefSeq GCF_000318665.1-RS_2025_07_02 2025-07-02 959 899 46 22406642 GCF_000318685.1 PRJNA224116 SAMEA2272341 na na 1071761 813 Chlamydia trachomatis E/SotonE8 strain=E/SotonE8 na latest Chromosome Major Full 2012-03-13 ASM31868v1 Sanger Institute GCA_000318685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/685/GCF_000318685.1_ASM31868v1/ na na na haploid bacteria 1056314 1055941 41.500000 2 2 9 NCBI RefSeq GCF_000318685.1-RS_2025_07_01 2025-07-01 965 902 46 22406642 GCF_000318705.1 PRJNA224116 SAMEA2272680 na na 1071764 813 Chlamydia trachomatis F/SotonF3 strain=F/SotonF3 na latest Chromosome Major Full 2012-03-15 ASM31870v1 Sanger Institute GCA_000318705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/705/GCF_000318705.1_ASM31870v1/ na na na haploid bacteria 1050282 1050123 41.500000 2 2 7 NCBI RefSeq GCF_000318705.1-RS_2025_07_01 2025-07-01 959 900 46 22406642 GCF_000318745.1 PRJNA224116 SAMEA2271946 na na 1071765 813 Chlamydia trachomatis G/SotonG1 strain=G/SotonG1 na latest Chromosome Major Full 2012-03-13 ASM31874v1 Sanger Institute GCA_000318745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/745/GCF_000318745.1_ASM31874v1/ na na na haploid bacteria 1049642 1049498 41.500000 2 2 3 NCBI RefSeq GCF_000318745.1-RS_2025_07_01 2025-07-01 961 908 46 22406642 GCF_000318765.1 PRJNA224116 SAMEA2272296 na na 1071766 813 Chlamydia trachomatis Ia/SotonIa1 strain=Ia/SotonIa1 na latest Complete Genome Major Full 2012-03-13 ASM31876v1 Sanger Institute GCA_000318765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/765/GCF_000318765.1_ASM31876v1/ na na na haploid bacteria 1050130 1050130 41.500000 2 2 2 NCBI RefSeq GCF_000318765.1-RS_2025_07_02 2025-07-02 958 903 46 22406642 GCF_000318785.1 PRJNA224116 SAMEA2272048 na na 1071767 813 Chlamydia trachomatis Ia/SotonIa3 strain=Ia/SotonIa3 na latest Complete Genome Major Full 2012-03-13 ASM31878v1 Sanger Institute GCA_000318785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/785/GCF_000318785.1_ASM31878v1/ na na na haploid bacteria 1050283 1050283 41.500000 2 2 2 NCBI RefSeq GCF_000318785.1-RS_2025_07_02 2025-07-02 958 903 46 22406642 GCF_000318805.1 PRJNA224116 SAMEA2272765 na na 1071768 813 Chlamydia trachomatis K/SotonK1 strain=K/SotonK1 na latest Chromosome Major Full 2012-03-13 ASM31880v1 Sanger Institute GCA_000318805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/805/GCF_000318805.1_ASM31880v1/ na na na haploid bacteria 1049940 1049772 41.500000 2 2 3 NCBI RefSeq GCF_000318805.1-RS_2025_07_02 2025-07-02 959 908 46 22406642 GCF_000318825.1 PRJNA224116 SAMEA2272273 na na 1071769 813 Chlamydia trachomatis L1/440/LN strain=L1/440/LN na latest Complete Genome Major Full 2012-03-13 ASM31882v1 Sanger Institute GCA_000318825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/825/GCF_000318825.1_ASM31882v1/ na na na haploid bacteria 1039261 1039261 41.500000 1 1 1 NCBI RefSeq GCF_000318825.1-RS_2025_07_02 2025-07-02 947 879 46 22406642 GCF_000318845.1 PRJNA224116 SAMEA2271978 na na 1071770 813 Chlamydia trachomatis L1/115 strain=L1/115 na latest Complete Genome Major Full 2012-03-13 ASM31884v1 Sanger Institute GCA_000318845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/845/GCF_000318845.1_ASM31884v1/ na na na haploid bacteria 1046584 1046584 41.500000 2 2 2 NCBI RefSeq GCF_000318845.1-RS_2025_07_02 2025-07-02 955 887 46 22406642 GCF_000318865.1 PRJNA224116 SAMEA2272374 na na 1071771 813 Chlamydia trachomatis L1/224 strain=L1/224 na latest Complete Genome Major Full 2012-03-13 ASM31886v1 Sanger Institute GCA_000318865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/865/GCF_000318865.1_ASM31886v1/ na na na haploid bacteria 1046319 1046319 41.500000 2 2 2 NCBI RefSeq GCF_000318865.1-RS_2025_02_24 2025-02-24 956 889 46 22406642 GCF_000318885.1 PRJNA224116 SAMEA767949 na na 1071772 813 Chlamydia trachomatis L2/25667R strain=L2/25667R na latest Complete Genome Major Full 2012-03-13 ASM31888v1 Sanger Institute GCA_000318885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/885/GCF_000318885.1_ASM31888v1/ na na na haploid bacteria 1038839 1038839 41.500000 1 1 1 NCBI RefSeq GCF_000318885.1-RS_2025_07_02 2025-07-02 947 880 46 22406642 GCF_000318905.1 PRJNA224116 SAMEA2272637 na na 1071773 813 Chlamydia trachomatis L2b/8200/07 strain=L2b/8200/07 na latest Complete Genome Major Full 2012-03-13 ASM31890v1 Sanger Institute GCA_000318905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/905/GCF_000318905.1_ASM31890v1/ na na na haploid bacteria 1046364 1046364 41.500000 2 2 2 NCBI RefSeq GCF_000318905.1-RS_2025_07_02 2025-07-02 955 889 46 22406642 GCF_000318925.1 PRJNA224116 SAMEA2272096 na na 1071774 813 Chlamydia trachomatis L2b/UCH-2 strain=L2b/UCH-2 na latest Complete Genome Major Full 2012-03-13 ASM31892v1 Sanger Institute GCA_000318925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/925/GCF_000318925.1_ASM31892v1/ na na na haploid bacteria 1046337 1046337 41.500000 2 2 2 NCBI RefSeq GCF_000318925.1-RS_2025_07_01 2025-07-01 955 889 46 22406642 GCF_000318945.1 PRJNA224116 SAMEA2272379 na na 1071775 813 Chlamydia trachomatis L2b/LST strain=L2b/LST na latest Chromosome Major Full 2012-03-13 ASM31894v1 Sanger Institute GCA_000318945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/945/GCF_000318945.1_ASM31894v1/ na na na haploid bacteria 1046376 1046205 41.500000 2 2 7 NCBI RefSeq GCF_000318945.1-RS_2025_07_01 2025-07-01 958 889 46 22406642 GCF_000318965.1 PRJNA224116 SAMEA2271980 na na 1071776 813 Chlamydia trachomatis L2b/CV204 strain=L2b/CV204 na latest Chromosome Major Full 2012-03-15 ASM31896v1 Sanger Institute GCA_000318965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/965/GCF_000318965.1_ASM31896v1/ na na na haploid bacteria 1046381 1046160 41.500000 2 2 10 NCBI RefSeq GCF_000318965.1-RS_2025_07_01 2025-07-01 960 891 46 22406642 GCF_000318985.1 PRJNA224116 SAMEA2272281 na na 1071777 813 Chlamydia trachomatis L2b/795 strain=L2b/795 na latest Complete Genome Major Full 2012-03-13 ASM31898v1 Sanger Institute GCA_000318985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/318/985/GCF_000318985.1_ASM31898v1/ na na na haploid bacteria 1046220 1046220 41.500000 2 2 2 NCBI RefSeq GCF_000318985.1-RS_2025_07_02 2025-07-02 955 889 46 22406642 GCF_000319005.1 PRJNA224116 SAMEA2272716 na na 1071778 813 Chlamydia trachomatis L2b/Ams1 strain=L2b/Ams1 na latest Chromosome Major Full 2012-03-13 ASM31900v1 Sanger Institute GCA_000319005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/005/GCF_000319005.1_ASM31900v1/ na na na haploid bacteria 1046379 1046301 41.500000 2 2 3 NCBI RefSeq GCF_000319005.1-RS_2025_07_02 2025-07-02 955 889 46 22406642 GCF_000319025.1 PRJNA224116 SAMEA2272228 na na 1071779 813 Chlamydia trachomatis L2b/Ams2 strain=L2b/Ams2 na latest Chromosome Major Full 2012-03-13 ASM31902v1 Sanger Institute GCA_000319025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/025/GCF_000319025.1_ASM31902v1/ na na na haploid bacteria 1046364 1046090 41.500000 2 2 8 NCBI RefSeq GCF_000319025.1-RS_2025_07_02 2025-07-02 957 890 46 22406642 GCF_000319045.1 PRJNA224116 SAMEA2271925 na na 1071780 813 Chlamydia trachomatis L2b/Ams3 strain=L2b/Ams3 na latest Chromosome Major Full 2012-03-13 ASM31904v1 Sanger Institute GCA_000319045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/045/GCF_000319045.1_ASM31904v1/ na na na haploid bacteria 1046218 1045857 41.500000 2 2 7 NCBI RefSeq GCF_000319045.1-RS_2025_07_01 2025-07-01 957 888 46 22406642 GCF_000319065.1 PRJNA224116 SAMEA2272333 na na 1071781 813 Chlamydia trachomatis L2b/Ams4 strain=L2b/Ams4 na latest Chromosome Major Full 2012-03-13 ASM31906v1 Sanger Institute GCA_000319065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/065/GCF_000319065.1_ASM31906v1/ na na na haploid bacteria 1046364 1046214 41.500000 2 2 6 NCBI RefSeq GCF_000319065.1-RS_2025_07_01 2025-07-01 957 889 46 22406642 GCF_000319085.1 PRJNA224116 SAMEA2272496 na na 1071782 813 Chlamydia trachomatis L2b/Ams5 strain=L2b/Ams5 na latest Chromosome Major Full 2012-03-13 ASM31908v1 Sanger Institute GCA_000319085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/085/GCF_000319085.1_ASM31908v1/ na na na haploid bacteria 1046348 1045969 41.500000 2 2 5 NCBI RefSeq GCF_000319085.1-RS_2025_07_01 2025-07-01 955 889 46 22406642 GCF_000319105.1 PRJNA224116 SAMEA2272107 na na 1071783 813 Chlamydia trachomatis L3/404/LN strain=L3/404/LN na latest Complete Genome Major Full 2012-03-13 ASM31910v1 Sanger Institute GCA_000319105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/105/GCF_000319105.1_ASM31910v1/ na na na haploid bacteria 1046672 1046672 41.500000 2 2 2 NCBI RefSeq GCF_000319105.1-RS_2025_07_01 2025-07-01 955 887 46 22406642 GCF_000319125.1 PRJNA224116 SAMEA2272614 na na 1075085 813 Chlamydia trachomatis L2b/Canada1 strain=L2b/Canada1 na latest Chromosome Major Full 2012-03-13 ASM31912v1 Sanger Institute GCA_000319125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/125/GCF_000319125.1_ASM31912v1/ na na na haploid bacteria 1046041 1045900 41.500000 2 2 5 NCBI RefSeq GCF_000319125.1-RS_2025_07_01 2025-07-01 955 873 46 22406642 GCF_000319145.1 PRJNA224116 SAMEA2272225 na na 1075086 813 Chlamydia trachomatis L2b/Canada2 strain=L2b/Canada2 na latest Chromosome Major Full 2012-03-13 ASM31914v1 Sanger Institute GCA_000319145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/145/GCF_000319145.1_ASM31914v1/ na na na haploid bacteria 1046246 1044778 41.500000 2 2 4 NCBI RefSeq GCF_000319145.1-RS_2025_07_01 2025-07-01 954 889 44 22406642 GCF_000319165.1 PRJNA224116 SAMEA2272713 na na 1075087 813 Chlamydia trachomatis L1/1322/p2 strain=L1/1322/p2 na latest Chromosome Major Full 2012-03-13 ASM31916v1 Sanger Institute GCA_000319165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/165/GCF_000319165.1_ASM31916v1/ na na na haploid bacteria 1046928 1046651 41.500000 2 2 6 NCBI RefSeq GCF_000319165.1-RS_2025_07_01 2025-07-01 956 888 46 22406642 GCF_000319185.1 PRJNA224116 SAMEA2272783 na na 1161918 52584 Brachyspira pilosicoli WesB strain=WesB na latest Chromosome Major Full 2012-09-13 ASM31918v1 Wellcome Trust Sanger Insititute GCA_000319185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/185/GCF_000319185.1_ASM31918v1/ na na na haploid bacteria 2889522 2859863 27.500000 1 1 31 NCBI RefSeq GCF_000319185.1-RS_2026_02_11 2026-02-11 2700 2598 40 22947175 GCF_000319205.1 PRJNA224116 SAMEA2272416 na na 1216962 35817 Helicobacter heilmannii ASB1.4 strain=type strain:ASB1.4 na latest Chromosome Major Full 2012-10-15 ASM31920v1 ansmet GCA_000319205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/205/GCF_000319205.1_ASM31920v1/ na na na haploid bacteria 1804601 1788851 48.000000 1 1 265 NCBI RefSeq GCF_000319205.1-RS_2026_02_11 2026-02-11 1946 1742 52 na GCF_000319225.1 PRJNA224116 SAMN02641519 na na 1267577 33056 Candidatus Kinetoplastidibacterium crithidiae (ex Angomonas deanei ATCC 30255) na RC12 latest Complete Genome Major Full 2012-12-11 ASM31922v1 LNCC GCA_000319225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/225/GCF_000319225.1_ASM31922v1/ na na na haploid bacteria 821813 821813 31.000000 1 1 1 NCBI RefSeq GCF_000319225.1-RS_2026_05_18 2026-05-18 800 723 56 23560078 GCF_000319245.1 PRJNA224116 SAMN02641518 na reference genome 1208923 233181 Candidatus Kinetoplastidibacterium blastocrithidiae (ex Strigomonas culicis) na RC12 latest Complete Genome Major Full 2012-12-11 ASM31924v1 LNCC GCA_000319245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/245/GCF_000319245.1_ASM31924v1/ na na na haploid bacteria 820037 820037 32.500000 1 1 1 NCBI RefSeq GCF_000319245.1-RS_2026_05_18 2026-05-18 796 739 55 23560078 GCF_000319285.1 PRJNA224116 SAMEA2272515 CAKW00000000.1 na 1073999 1163710 Cronobacter condimenti 1330 strain=1330 na latest Contig Major Full 2012-12-03 ASM31928v1 LifeTech GCA_000319285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/285/GCF_000319285.1_ASM31928v1/ na assembly from type material na haploid bacteria 4480625 4480625 56.000000 0 155 155 NCBI RefSeq GCF_000319285.1-RS_2026_03_31 2026-03-31 4310 3749 85 23166675 GCF_000319305.2 PRJNA224116 SAMN02472262 AMWJ00000000.2 na 1005395 2692112 Pseudomonas bharatica CSV86 strain=CSV86 na latest Contig Major Full 2020-05-11 ASM31930v2 National Environmental Engineering Research Institute (NEERI) GCA_000319305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/305/GCF_000319305.2_ASM31930v2/ na assembly from type material na haploid bacteria 6787172 6787172 62.500000 0 9 9 NCBI RefSeq GCF_000319305.2-RS_2025_09_27 2025-09-27 6423 5640 96 23469351 GCF_000319325.1 PRJNA224116 SAMEA2271931 CAKX00000000.1 na 1074000 535744 Cronobacter universalis NCTC 9529 strain=NCTC 9529 na latest Scaffold Major Full 2012-12-03 ASM31932v1 LifeTech GCA_000319325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/325/GCF_000319325.1_ASM31932v1/ na assembly from type material na haploid bacteria 4524631 4523661 57.500000 0 231 328 NCBI RefSeq GCF_000319325.1-RS_2026_03_31 2026-03-31 4748 3136 82 23166675 GCF_000319365.1 PRJNA224116 SAMEA4532336 na reference genome 1116213 209446 Candidatus Mycoplasma haematominutum 'Birmingham 1' strain=Birmingham 1 na latest Contig Major Full 2011-11-22 ASM31936v1 University of Bristol GCA_000319365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/365/GCF_000319365.1_ASM31936v1/ na na na haploid bacteria 513880 513880 35.500000 0 1 1 NCBI RefSeq GCF_000319365.1-RS_2026_05_02 2026-05-02 575 537 37 na GCF_000319385.1 PRJNA224116 SAMN02604248 na reference genome 1193729 1263979 Candidatus Endolissoclinum faulkneri L2 strain=L2 na latest Complete Genome Major Full 2012-11-28 ASM31938v1 University of Utah GCA_000319385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/385/GCF_000319385.1_ASM31938v1/ na na na haploid bacteria 1481191 1481191 34.000000 1 1 1 NCBI RefSeq GCF_000319385.1-RS_2026_03_31 2026-03-31 837 785 48 23185008 GCF_000319475.1 PRJNA224116 SAMN02603673 na na 1225788 492670 Bacillus velezensis AS43.3 strain=AS43.3 na latest Complete Genome Major Full 2012-12-12 ASM31947v1 NCAUR-ARS-USDA GCA_000319475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/475/GCF_000319475.1_ASM31947v1/ na na na haploid bacteria 3961368 3961368 46.500000 1 1 1 NCBI RefSeq GCF_000319475.1-RS_2026_03_03 2026-03-03 3935 3635 122 25835027 GCF_000319575.2 PRJNA224116 SAMN02603230 na reference genome 1260251 1335746 Spiribacter salinus M19-40 strain=M19-40 na latest Complete Genome Major Full 2013-05-24 ASM31957v2 Evolutionary Genomics Group, Universidad Miguel Hernandez, San Juan de Alicante, Spain GCA_000319575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/575/GCF_000319575.2_ASM31957v2/ na assembly from type material na haploid bacteria 1739487 1739487 62.500000 1 1 1 NCBI RefSeq GCF_000319575.2-RS_2026_05_02 2026-05-02 1747 1686 52 23409269 GCF_000319635.2 PRJNA225509 SAMN02981487 ANPB00000000.2 reference genome 1213859 690256 Colletotrichum fructicola Nara gc5 strain=Nara gc5 na latest Contig Major Full 2020-05-12 ASM31963v2 RIKEN Plant Science Center GCA_000319635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/635/GCF_000319635.2_ASM31963v2/ na na na haploid fungi 59542867 59542867 53.000000 0 12 12 RIKEN Plant Science Center Annotation submitted by RIKEN Plant Science Center 2024-06-26 17388 17388 0 na GCF_000319655.2 PRJNA224116 SAMN02471519 na na 1233262 2104 Mycoplasmoides pneumoniae PO1 strain=PO1 na latest Complete Genome Major Full 2015-08-21 ASM31965v2 University of Alabama at Birmingham GCA_000319655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/655/GCF_000319655.2_ASM31965v2/ na na na haploid bacteria 817216 817216 40.000000 1 1 1 NCBI RefSeq GCF_000319655.2-RS_2026_02_26 2026-02-26 772 675 42 23412845;26275904 GCF_000319675.2 PRJNA224116 SAMN02471520 na na 1236904 2104 Mycoplasmoides pneumoniae PI 1428 strain=PI 1428 na latest Complete Genome Major Full 2015-08-21 ASM31967v2 University of Alabama at Birmingham GCA_000319675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/675/GCF_000319675.2_ASM31967v2/ na na na haploid bacteria 816496 816496 40.000000 1 1 1 NCBI RefSeq GCF_000319675.2-RS_2026_02_28 2026-02-28 761 674 43 23412845;26275904 GCF_000319715.1 PRJNA224116 SAMN02470706 ANFG00000000.1 na 1248436 1392 Bacillus anthracis str. 3166 strain=3166 na latest Contig Major Full 2012-12-12 BA_3166assembly Northern Arizona University GCA_000319715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/715/GCF_000319715.1_BA_3166assembly/ na na na haploid bacteria 5505136 5505136 35.000000 0 5 5 NCBI RefSeq GCF_000319715.1-RS_2025_12_22 2025-12-22 5775 5272 135 23599294 GCF_000319775.1 PRJNA224116 SAMN02471173 ANKP00000000.1 na 1249621 1249621 Cupriavidus sp. HMR-1 strain=HMR-1 na latest Contig Major Full 2012-12-12 ASM31977v1 The University of Hong Kong GCA_000319775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/775/GCF_000319775.1_ASM31977v1/ na na na haploid bacteria 6642382 6642382 64.000000 0 285 285 NCBI RefSeq GCF_000319775.1-RS_2024_05_23 2024-05-23 6233 6016 59 23409271 GCF_000319795.2 PRJNA224116 SAMN02225279 AMEA00000000.2 na 1218149 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm9 strain=STm9 na latest Contig Major Full 2013-08-23 STm9.2 University of Melbourne GCA_000319795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/795/GCF_000319795.2_STm9.2/ na na na haploid bacteria 4928723 4928723 52.000000 0 88 88 NCBI RefSeq GCF_000319795.2-RS_2025_04_18 2025-04-18 4882 4623 107 23792739 GCF_000319835.1 PRJNA224116 SAMN01141742 AMVW00000000.1 na 1240773 562 Escherichia coli O104:H4 str. 11-02318 strain=11-02318 na latest Scaffold Major Full 2012-12-13 Esch_coli_11-02318_V1 Broad Institute GCA_000319835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/835/GCF_000319835.1_Esch_coli_11-02318_V1/ na na na haploid bacteria 5433881 5433730 50.500000 0 41 43 NCBI RefSeq GCF_000319835.1-RS_2025_06_13 2025-06-13 5412 4998 126 na GCF_000319855.1 PRJNA224116 SAMN00771318 AGWF00000000.1 na 1240758 562 Escherichia coli O104:H4 str. Ec11-9450 strain=Ec 11-9450 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec_11-9450_V2 Broad Institute GCA_000319855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/855/GCF_000319855.1_Esch_coli_Ec_11-9450_V2/ na na na haploid bacteria 5317122 5267286 51.000000 0 10 68 NCBI RefSeq GCF_000319855.1-RS_2025_06_13 2025-06-13 5227 4875 92 na GCF_000319875.1 PRJNA224116 SAMN00771319 AGWG00000000.1 na 1240760 562 Escherichia coli O104:H4 str. Ec11-9990 strain=Ec11-9990 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec_11-9990_V2 Broad institute GCA_000319875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/875/GCF_000319875.1_Esch_coli_Ec_11-9990_V2/ na na na haploid bacteria 5397132 5363291 50.500000 0 15 50 NCBI RefSeq GCF_000319875.1-RS_2025_06_13 2025-06-13 5331 4938 116 na GCF_000319915.1 PRJNA224116 SAMN00778954 AHOU00000000.1 na 1240761 562 Escherichia coli O104:H4 str. Ec11-4984 strain=Ec11-4984 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-4984_V1 Broad Institute GCA_000319915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/915/GCF_000319915.1_Esch_coli_Ec11-4984_V1/ na na na haploid bacteria 5307310 5269271 50.500000 0 13 39 NCBI RefSeq GCF_000319915.1-RS_2025_06_13 2025-06-13 5232 4851 107 na GCF_000319935.1 PRJNA224116 SAMN00778955 AHOV00000000.1 na 1240766 562 Escherichia coli O104:H4 str. Ec11-5604 strain=Ec11-5604 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-5604_V1 Broad Institute GCA_000319935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/935/GCF_000319935.1_Esch_coli_Ec11-5604_V1/ na na na haploid bacteria 5286786 5258939 50.500000 0 19 44 NCBI RefSeq GCF_000319935.1-RS_2025_06_13 2025-06-13 5233 4854 102 na GCF_000319955.1 PRJNA224116 SAMN00778956 AHOW00000000.1 na 1240762 562 Escherichia coli O104:H4 str. Ec11-4986 strain=Ec11-4986 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-4986_V1 Broad Institute GCA_000319955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/955/GCF_000319955.1_Esch_coli_Ec11-4986_V1/ na na na haploid bacteria 5308391 5280601 50.500000 0 13 39 NCBI RefSeq GCF_000319955.1-RS_2025_06_13 2025-06-13 5265 4889 103 na GCF_000319975.1 PRJNA224116 SAMN00778957 AHOX00000000.1 na 1240763 562 Escherichia coli O104:H4 str. Ec11-4987 strain=Ec11-4987 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-4987_V1 Broad Institute GCA_000319975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/975/GCF_000319975.1_Esch_coli_Ec11-4987_V1/ na na na haploid bacteria 5304113 5248342 50.500000 0 11 36 NCBI RefSeq GCF_000319975.1-RS_2025_06_13 2025-06-13 5224 4849 99 na GCF_000319995.1 PRJNA224116 SAMN01141737 AMVR00000000.1 na 1240768 562 Escherichia coli O104:H4 str. 11-02030 strain=11-02030 na latest Contig Major Full 2012-12-11 Esch_coli_11-02030_V1 Broad Institute GCA_000319995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/319/995/GCF_000319995.1_Esch_coli_11-02030_V1/ na na na haploid bacteria 5432043 5432043 50.500000 0 43 43 NCBI RefSeq GCF_000319995.1-RS_2025_07_12 2025-07-12 5414 4989 125 na GCF_000320015.1 PRJNA224116 SAMN01141738 AMVS00000000.1 na 1240769 562 Escherichia coli O104:H4 str. 11-02033-1 strain=11-02033-1 na latest Contig Major Full 2012-12-11 Esch_coli_11-02033-1_V1 Broad Institute GCA_000320015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/015/GCF_000320015.1_Esch_coli_11-02033-1_V1/ na na na haploid bacteria 5438336 5438336 50.500000 0 52 52 NCBI RefSeq GCF_000320015.1-RS_2025_06_13 2025-06-13 5416 5002 121 na GCF_000320035.1 PRJNA224116 SAMN01141739 AMVT00000000.1 na 1240770 562 Escherichia coli O104:H4 str. 11-02092 strain=11-02092 na latest Contig Major Full 2012-12-11 Esch_coli_11-02092_V1 Broad Institute GCA_000320035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/035/GCF_000320035.1_Esch_coli_11-02092_V1/ na na na haploid bacteria 5420935 5420935 50.500000 0 35 35 NCBI RefSeq GCF_000320035.1-RS_2025_06_13 2025-06-13 5392 4987 115 na GCF_000320045.1 PRJNA224116 SAMN00771320 AGWH00000000.1 na 1240759 562 Escherichia coli O104:H4 str. Ec11-9941 strain=Ec 11-9941 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec_11-9941_V6 Broad Institute GCA_000320045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/045/GCF_000320045.1_Esch_coli_Ec_11-9941_V6/ na na na haploid bacteria 5434948 5410388 50.500000 0 15 41 NCBI RefSeq GCF_000320045.1-RS_2025_06_13 2025-06-13 5410 4998 125 na GCF_000320075.1 PRJNA224116 SAMN01141740 AMVU00000000.1 na 1240771 562 Escherichia coli O104:H4 str. 11-02093 strain=11-02093 na latest Contig Major Full 2012-12-11 Esch_coli_11-02093_V1 Broad Institute GCA_000320075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/075/GCF_000320075.1_Esch_coli_11-02093_V1/ na na na haploid bacteria 5407289 5407289 50.500000 0 38 38 NCBI RefSeq GCF_000320075.1-RS_2025_07_09 2025-07-09 5381 4974 122 na GCF_000320095.1 PRJNA224116 SAMN01141741 AMVV00000000.1 na 1240772 562 Escherichia coli O104:H4 str. 11-02281 strain=11-02281 na latest Contig Major Full 2012-12-11 Esch_coli_11-02281_V1 Broad Institute GCA_000320095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/095/GCF_000320095.1_Esch_coli_11-02281_V1/ na na na haploid bacteria 5434019 5434019 50.500000 0 46 46 NCBI RefSeq GCF_000320095.1-RS_2025_07_09 2025-07-09 5417 4994 125 na GCF_000320115.1 PRJNA224116 SAMN01141743 AMVX00000000.1 na 1240774 562 Escherichia coli O104:H4 str. 11-02913 strain=11-02913 na latest Contig Major Full 2012-12-11 Esch_coli_11-02913_V1 Broad Institute GCA_000320115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/115/GCF_000320115.1_Esch_coli_11-02913_V1/ na na na haploid bacteria 5434724 5434724 50.500000 0 37 37 NCBI RefSeq GCF_000320115.1-RS_2025_06_13 2025-06-13 5414 5001 127 na GCF_000320135.1 PRJNA224116 SAMN01141744 AMVY00000000.1 na 1240775 562 Escherichia coli O104:H4 str. 11-03439 strain=11-03439 na latest Contig Major Full 2012-12-11 Esch_coli_11-03439_V1 Broad Institute GCA_000320135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/135/GCF_000320135.1_Esch_coli_11-03439_V1/ na na na haploid bacteria 5435819 5435819 50.500000 0 42 42 NCBI RefSeq GCF_000320135.1-RS_2025_06_13 2025-06-13 5416 5003 126 na GCF_000320155.1 PRJNA224116 SAMN01141746 AMWA00000000.1 na 1240777 562 Escherichia coli O104:H4 str. 11-03943 strain=11-03943 na latest Contig Major Full 2012-12-11 Esch_coli_11-03943_V1 Broad Institute GCA_000320155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/155/GCF_000320155.1_Esch_coli_11-03943_V1/ na na na haploid bacteria 5435258 5435258 50.500000 0 42 42 NCBI RefSeq GCF_000320155.1-RS_2025_07_09 2025-07-09 5407 4991 124 na GCF_000320175.1 PRJNA224116 SAMN01141745 AMVZ00000000.1 na 1240776 562 Escherichia coli O104:H4 str. 11-04080 strain=11-04080 na latest Contig Major Full 2012-12-11 Esch_coli_11-04080_V1 Broad Institute GCA_000320175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/175/GCF_000320175.1_Esch_coli_11-04080_V1/ na na na haploid bacteria 5423822 5423822 50.500000 0 43 43 NCBI RefSeq GCF_000320175.1-RS_2025_06_13 2025-06-13 5426 5008 127 na GCF_000320195.1 PRJNA224116 SAMN00778958 AHOY00000000.1 na 1240764 562 Escherichia coli O104:H4 str. Ec11-4988 strain=Ec11-4988 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-4988_V1 Broad Institute GCA_000320195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/195/GCF_000320195.1_Esch_coli_Ec11-4988_V1/ na na na haploid bacteria 5403929 5358971 50.500000 0 15 43 NCBI RefSeq GCF_000320195.1-RS_2025_06_13 2025-06-13 5336 4948 103 na GCF_000320215.1 PRJNA224116 SAMN00778959 AHOZ00000000.1 na 1240765 562 Escherichia coli O104:H4 str. Ec11-5603 strain=Ec11-5603 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-5603_V1 Broad Institute GCA_000320215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/215/GCF_000320215.1_Esch_coli_Ec11-5603_V1/ na na na haploid bacteria 5424511 5382781 50.500000 0 10 35 NCBI RefSeq GCF_000320215.1-RS_2025_06_13 2025-06-13 5352 4977 102 na GCF_000320235.1 PRJNA224116 SAMN00778960 AHPA00000000.1 na 1240767 562 Escherichia coli O104:H4 str. Ec11-6006 strain=Ec11-6006 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec11-6006_V1 Broad Institute GCA_000320235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/235/GCF_000320235.1_Esch_coli_Ec11-6006_V1/ na na na haploid bacteria 5419573 5368812 50.500000 0 14 42 NCBI RefSeq GCF_000320235.1-RS_2025_06_14 2025-06-14 5358 4976 101 na GCF_000320255.1 PRJNA224116 SAMN00809012 AIPQ00000000.1 na 1240778 562 Escherichia coli O104:H4 str. Ec12-0465 strain=Ec12-0465 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec12-0465_V1 Broad Institute GCA_000320255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/255/GCF_000320255.1_Esch_coli_Ec12-0465_V1/ na na na haploid bacteria 5303516 5278586 50.500000 0 9 36 NCBI RefSeq GCF_000320255.1-RS_2025_06_13 2025-06-13 5235 4829 121 na GCF_000320275.1 PRJNA224116 SAMN00809013 AIPR00000000.1 na 1240779 562 Escherichia coli O104:H4 str. Ec12-0466 strain=Ec12-0466 na latest Scaffold Major Full 2012-12-13 Esch_coli_Ec12-0466_V1 Broad Institute GCA_000320275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/275/GCF_000320275.1_Esch_coli_Ec12-0466_V1/ na na na haploid bacteria 5474652 5426413 50.500000 0 13 50 NCBI RefSeq GCF_000320275.1-RS_2025_06_14 2025-06-14 5423 5009 116 na GCF_000320305.1 PRJNA224116 SAMN02471974 AFHH00000000.1 na 1027372 1351 Enterococcus faecalis OG1X strain=OG1X na latest Contig Major Full 2012-12-12 ASM32030v1 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000320305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/305/GCF_000320305.1_ASM32030v1/ na na na haploid bacteria 2739073 2739073 37.500000 0 78 78 NCBI RefSeq GCF_000320305.1-RS_2026_03_21 2026-03-21 2631 2495 56 23104812 GCF_000320345.1 PRJNA224116 SAMN02472059 ANCA00000000.1 na 1238674 759620 Weissella ceti NC36 strain=NC36 na latest Contig Major Full 2012-12-13 ASM32034v1 USAMRIID GCA_000320345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/345/GCF_000320345.1_ASM32034v1/ na na na haploid bacteria 1352640 1352640 41.000000 0 7 7 NCBI RefSeq GCF_000320345.1-RS_2025_06_02 2025-06-02 1356 1267 87 23409274 GCF_000320365.1 PRJNA224116 SAMN02472058 ANIN00000000.1 reference genome 1230338 765840 Moraxella macacae 0408225 strain=408225 na latest Contig Major Full 2012-12-13 MorMac1.0 USAMRIID GCA_000320365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/365/GCF_000320365.1_MorMac1.0/ na na na haploid bacteria 2084664 2084664 39.500000 1 3 3 NCBI RefSeq GCF_000320365.1-RS_2025_11_27 2025-11-27 1881 1804 62 23409273 GCF_000320385.2 PRJNA224116 SAMN02603224 na na 1235461 382 Sinorhizobium meliloti GR4 strain=GR4 na latest Complete Genome Major Full 2015-07-08 ASM32038v2 Estacion Experimental del Zaidin - Consejo Superior de Investigaciones Cientificas GCA_000320385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/385/GCF_000320385.2_ASM32038v2/ na na na haploid bacteria 7141709 7141709 62.000000 5 5 5 NCBI RefSeq GCF_000320385.2-RS_2026_04_30 2026-04-30 6774 6418 67 na GCF_000320405.1 PRJNA224116 SAMN02436689 AMEZ00000000.1 na 545697 36834 Clostridium celatum DSM 1785 strain=DSM 1785 na latest Scaffold Major Full 2013-01-29 ASM32040v1 Washington University Genome Sequencing Center GCA_000320405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/405/GCF_000320405.1_ASM32040v1/ na assembly from type material na haploid bacteria 3553721 3553421 27.500000 0 122 137 NCBI RefSeq GCF_000320405.1-RS_2026_04_14 2026-04-14 3356 3166 35 na GCF_000320425.1 PRJNA224116 SAMN02402991 ADOV00000000.1 na 755859 632 Yersinia pestis 12 strain=12 na latest Contig Major Full 2012-12-07 ASM32042v1 Beijing Genomics Institute GCA_000320425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/425/GCF_000320425.1_ASM32042v1/ na na na haploid bacteria 4368767 4368767 48.000000 0 1092 1092 NCBI RefSeq GCF_000320425.1-RS_2026_03_28 2026-03-28 4258 3885 32 23271803 GCF_000320445.1 PRJNA224116 SAMN02402993 ADOX00000000.1 na 755866 632 Yersinia pestis 2 strain=2 na latest Contig Major Full 2012-12-07 ASM32044v1 Beijing Genomics Institute GCA_000320445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/445/GCF_000320445.1_ASM32044v1/ na na na haploid bacteria 4453910 4453910 48.000000 0 1057 1057 NCBI RefSeq GCF_000320445.1-RS_2026_03_28 2026-03-28 4319 3981 31 23271803 GCF_000320465.1 PRJNA224116 SAMN02402994 ADOY00000000.1 na 755862 632 Yersinia pestis 2330 strain=2330 na latest Contig Major Full 2012-12-07 ASM32046v1 Beijing Genomics Institute GCA_000320465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/465/GCF_000320465.1_ASM32046v1/ na na na haploid bacteria 4427639 4427639 47.500000 0 798 798 NCBI RefSeq GCF_000320465.1-RS_2026_03_28 2026-03-28 4211 3929 32 23271803 GCF_000320505.1 PRJNA224116 SAMD00036626 BAGX00000000.2 na 1214066 1348249 Methanobrevibacter boviskoreani JH1 strain=JH1 na latest Contig Major Full 2012-10-03 ASM32050v2 Korea Research Institute of Bioscience and Biotechnology GCA_000320505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/505/GCF_000320505.1_ASM32050v2/ na assembly from type material na haploid archaea 2045801 2045801 29.000000 0 54 54 NCBI RefSeq GCF_000320505.1-RS_2025_12_03 2025-12-03 1800 1744 41 23469331 GCF_000320565.1 PRJNA264111 SAMN00120232 AEFD00000000.1 reference genome 692275 85929 Sphaerulina musiva SO2202 strain=SO2202 na latest Scaffold Major Full 2013-02-27 Septoria musiva SO2202 v1.0 JGI GCA_000320565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/565/GCF_000320565.1_Septoria_musiva_SO2202_v1.0/ na na na haploid fungi 29352103 28917357 51.000000 0 72 458 JGI Annotation submitted by JGI 2020-02-05 10228 10144 76 23236275 GCF_000320585.1 PRJNA245138 SAMN02743865 AEOJ00000000.1 reference genome 747525 984962 Heterobasidion irregulare TC 32-1 strain=TC 32-1 na latest Scaffold Major Full 2014-01-17 Heterobasidion irregulare v2.0 JGI GCA_000320585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/585/GCF_000320585.1_Heterobasidion_irregulare_v2.0/ na na na haploid fungi 33649967 33649644 52.000000 0 15 18 JGI Annotation submitted by JGI 2024-01-02 13270 13269 0 22463738 GCF_000320785.1 PRJNA264108 SAMN01081617 ALAU00000000.1 reference genome 1130832 5286 Rhodotorula toruloides NP11 strain=NP11 na latest Scaffold Major Full 2013-04-01 RHOziaDV1.0 Dalian Institute of Chemical Physics GCA_000320785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/785/GCF_000320785.1_RHOziaDV1.0/ na na na haploid fungi 20223942 20180280 62.000000 0 94 304 Dalian Institute of Chemical Physics Annotation submitted by Dalian Institute of Chemical Physics 2024-01-02 8171 8140 0 23047670 GCF_000320945.2 PRJNA224116 SAMD00036647 BANL00000000.1 na 1260624 1260624 Idiomarina sp. 28-8 strain=42244 na latest Scaffold Major Full 2013-08-27 ASM32094v2 Korea Research Institute of Bioscience and Biotechnology GCA_000320945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/945/GCF_000320945.2_ASM32094v2/ na na na haploid bacteria 2999966 2974141 47.000000 0 76 110 NCBI RefSeq GCF_000320945.2-RS_2024_08_17 2024-08-17 2902 2791 76 24092779 GCF_000320965.2 PRJNA224116 SAMD00036648 BANM00000000.1 na 1260129 1346 Streptococcus iniae KCTC 11634BP strain=KCTC 11634BP na latest Scaffold Major Full 2013-08-27 ASM32096v2 Korea Research Institute of Bioscience and Biotechnology GCA_000320965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/320/965/GCF_000320965.2_ASM32096v2/ na na na haploid bacteria 2064537 1995338 36.500000 0 113 174 NCBI RefSeq GCF_000320965.2-RS_2025_08_02 2025-08-02 1964 1854 57 24201192 GCF_000321005.1 PRJNA224116 SAMEA2272803 CAEK00000000.1 reference genome 1033733 1288120 Anaerococcus senegalensis JC48 strain=type strain: JC17 na latest Scaffold Major Full 2012-12-06 ASM32100v2 laboratoire URMITE CNRS 6236 GCA_000321005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/005/GCF_000321005.1_ASM32100v2/ na na na haploid bacteria 1795828 1780308 28.500000 0 21 39 NCBI RefSeq GCF_000321005.1-RS_2026_04_23 2026-04-23 1787 1692 58 na GCF_000321025.1 PRJNA224116 SAMEA2272315 CAEL00000000.1 reference genome 1033744 1465757 Peptoniphilus senegalensis JC140 strain=type strain: JC140 na latest Scaffold Major Full 2012-12-06 ASM32102v1 laboratoire URMITE CNRS 6236 GCA_000321025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/025/GCF_000321025.1_ASM32102v1/ na assembly from type material na haploid bacteria 1851340 1816348 32.000000 0 29 64 NCBI RefSeq GCF_000321025.1-RS_2026_03_21 2026-03-21 1796 1720 48 na GCF_000321045.1 PRJNA224116 SAMEA2272705 CAEO00000000.1 reference genome 1095768 1485952 Phytobacter massiliensis JC163 strain=type strain: JC163 na latest Scaffold Major Full 2012-12-06 ASM32104v2 Laboratoire URMITE CNRS 6236 GCA_000321045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/045/GCF_000321045.1_ASM32104v2/ na assembly from type material na haploid bacteria 5003540 4922247 55.500000 0 77 236 NCBI RefSeq GCF_000321045.1-RS_2026_06_10 2026-06-10 4836 4542 95 na GCF_000321085.1 PRJNA224116 SAMEA2272129 CANQ00000000.1 na 904143 1292 Staphylococcus warneri A487 strain=A487 na latest Contig Major Full 2012-12-03 ASM32108v1 University of Manchester School of Medicine GCA_000321085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/085/GCF_000321085.1_ASM32108v1/ na na na haploid bacteria 2523252 2523252 32.500000 0 71 71 NCBI RefSeq GCF_000321085.1-RS_2025_12_19 2025-12-19 2527 2409 70 21539624 GCF_000321105.1 PRJNA224116 SAMEA2272518 CAOI00000000.1 na 1242247 1710 Cellulosimicrobium cellulans LMG 16121 strain=LMG 16121 na latest Contig Major Full 2012-12-03 ASM32110v1 VIB-UGENT GCA_000321105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/105/GCF_000321105.1_ASM32110v1/ na assembly from heterotypic synonym type material na haploid bacteria 4276035 4276035 74.500000 0 428 428 NCBI RefSeq GCF_000321105.1-RS_2026_02_15 2026-02-15 4155 3953 60 na GCF_000321125.2 PRJNA224116 SAMEA3138429 CAOR00000000.2 na 1211707 339 Xanthomonas campestris pv. campestris str. Xca5 strain=Xca5 na latest Scaffold Major Full 2013-05-30 ASM32112v4 CNRS GCA_000321125.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/125/GCF_000321125.2_ASM32112v4/ na na na haploid bacteria 5001856 4990056 65.000000 0 14 132 NCBI RefSeq GCF_000321125.2-RS_2026_05_17 2026-05-17 4380 4086 146 na GCF_000321145.1 PRJNA224116 SAMEA2272638 CAOT00000000.1 na 1240385 562 Escherichia coli O157:H7 str. H093800014 strain=H093800014 na latest Contig Major Full 2012-12-03 ASM32114v1 hpa GCA_000321145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/145/GCF_000321145.1_ASM32114v1/ na na na haploid bacteria 5466582 5466582 50.500000 0 209 209 NCBI RefSeq GCF_000321145.1-RS_2025_07_13 2025-07-13 5720 5075 130 na GCF_000321165.1 PRJNA224116 SAMEA2272249 CAPF00000000.1 reference genome 1232436 1232436 Enorma timonensis strain=GD5 na latest Contig Major Full 2012-12-04 ASM32116v1 ebi GCA_000321165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/165/GCF_000321165.1_ASM32116v1/ na assembly from type material na haploid bacteria 2331554 2331554 66.000000 0 118 118 NCBI RefSeq GCF_000321165.1-RS_2025_12_13 2025-12-13 2080 2000 56 na GCF_000321185.1 PRJNA224116 SAMEA2272318 CAPG00000000.1 na 1513284 1513284 Bacillus sp. AP8 strain=AP8 na latest Contig Major Full 2012-12-04 ASM32118v1 ebi GCA_000321185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/185/GCF_000321185.1_ASM32118v1/ na na na haploid bacteria 4588940 4588940 34.000000 0 120 120 NCBI RefSeq GCF_000321185.1-RS_2025_08_25 2025-08-25 4489 4282 104 na GCF_000321205.1 PRJNA224116 SAMEA2272467 CAPH00000000.1 na 1211813 1470347 Alistipes ihumii AP11 strain=AP11 na latest Contig Major Full 2012-12-03 ASM32120v1 ebi GCA_000321205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/205/GCF_000321205.1_ASM32120v1/ na assembly from type material na haploid bacteria 2772824 2772824 58.000000 0 60 60 NCBI RefSeq GCF_000321205.1-RS_2026_01_08 2026-01-08 2262 2179 53 na GCF_000321285.1 PRJNA224116 SAMN02470051 ANGF00000000.1 na 1203260 34085 Riemerella anatipestifer RA-SG strain=RA-SG na latest Scaffold Major Full 2013-01-02 RA-SG Institute of Veterinary Medicine, Guangdong Academy of Agricultural Sciences GCA_000321285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/285/GCF_000321285.1_RA-SG/ na na na haploid bacteria 2172634 2159770 35.000000 0 31 75 NCBI RefSeq GCF_000321285.1-RS_2026_04_15 2026-04-15 2080 2001 45 23516232 GCF_000321415.2 PRJNA224116 SAMN02602962 na reference genome 1255043 186931 Thioalkalivibrio nitratireducens DSM 14787 strain=DSM 14787 na latest Complete Genome Major Full 2015-12-23 ASM32141v2 A.N. Bach Institute of Biochemistry GCA_000321415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/415/GCF_000321415.2_ASM32141v2/ na assembly from type material na haploid bacteria 4002350 4002350 66.500000 1 1 1 NCBI RefSeq GCF_000321415.2-RS_2026_03_03 2026-03-03 3805 3616 54 na GCF_000321465.1 PRJNA224116 SAMN00779800 AHWH00000000.1 na 1138880 1352 Enterococcus faecium EnGen0005 strain=E0045 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0045_V1 Broad Institute GCA_000321465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/465/GCF_000321465.1_Ente_faec_E0045_V1/ na na na haploid bacteria 2719774 2611874 38.000000 0 13 81 NCBI RefSeq GCF_000321465.1-RS_2026_01_22 2026-01-22 2598 2336 76 na GCF_000321485.1 PRJNA224116 SAMN00779811 AHWI00000000.1 na 1138881 1352 Enterococcus faecium EnGen0012 strain=EnGen0012 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0120_V1 Broad Institute GCA_000321485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/485/GCF_000321485.1_Ente_faec_E0120_V1/ na na na haploid bacteria 2878295 2855496 38.000000 0 20 42 NCBI RefSeq GCF_000321485.1-RS_2026_03_15 2026-03-15 2836 2669 74 na GCF_000321505.1 PRJNA224116 SAMN00779822 AHWJ00000000.1 na 1138882 1352 Enterococcus faecium EnGen0010 strain=E0164 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0164_V1 Broad Institute GCA_000321505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/505/GCF_000321505.1_Ente_faec_E0164_V1/ na na na haploid bacteria 2678717 2592445 38.500000 0 14 78 NCBI RefSeq GCF_000321505.1-RS_2026_01_20 2026-01-20 2533 2314 74 na GCF_000321525.1 PRJNA224116 SAMN00779833 AHWK00000000.1 na 1138883 1352 Enterococcus faecium EnGen0022 strain=E0269 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0269_V1 Broad Institute GCA_000321525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/525/GCF_000321525.1_Ente_faec_E0269_V1/ na na na haploid bacteria 2752273 2653254 38.000000 0 13 75 NCBI RefSeq GCF_000321525.1-RS_2026_01_22 2026-01-22 2626 2415 71 na GCF_000321545.1 PRJNA224116 SAMN00779844 AHWL00000000.1 na 1138884 1352 Enterococcus faecium EnGen0013 strain=EnGen0013 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0333_V1 Broad Institute GCA_000321545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/545/GCF_000321545.1_Ente_faec_E0333_V1/ na na na haploid bacteria 2772503 2763075 38.000000 0 27 41 NCBI RefSeq GCF_000321545.1-RS_2026_03_15 2026-03-15 2734 2581 89 na GCF_000321565.1 PRJNA224116 SAMN00779855 AHWM00000000.1 na 1138885 1352 Enterococcus faecium EnGen0014 strain=E0679 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0679_V1 Broad Institute GCA_000321565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/565/GCF_000321565.1_Ente_faec_E0679_V1/ na na na haploid bacteria 2432874 2413810 38.500000 0 8 24 NCBI RefSeq GCF_000321565.1-RS_2026_01_24 2026-01-24 2342 2160 82 na GCF_000321585.1 PRJNA224116 SAMN00779866 AHWN00000000.1 na 1138886 1352 Enterococcus faecium EnGen0019 strain=E0680 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0680_V1 Broad Institute GCA_000321585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/585/GCF_000321585.1_Ente_faec_E0680_V1/ na na na haploid bacteria 2702740 2673585 38.000000 0 18 40 NCBI RefSeq GCF_000321585.1-RS_2026_01_23 2026-01-23 2633 2402 87 na GCF_000321605.1 PRJNA224116 SAMN00779867 AHWO00000000.1 na 1138887 1352 Enterococcus faecium EnGen0008 strain=E0688 na latest Scaffold Major Full 2013-03-21 Ente_faec_E0688_V1 Broad Institute GCA_000321605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/605/GCF_000321605.1_Ente_faec_E0688_V1/ na na na haploid bacteria 2659939 2645484 38.500000 0 7 24 NCBI RefSeq GCF_000321605.1-RS_2026_01_20 2026-01-20 2613 2368 96 na GCF_000321625.1 PRJNA224116 SAMN00779868 AHWP00000000.1 na 1138888 1352 Enterococcus faecium EnGen0015 strain=EnGen0015 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1007_V1 Broad Institute GCA_000321625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/625/GCF_000321625.1_Ente_faec_E1007_V1/ na na na haploid bacteria 2769858 2754524 38.500000 0 6 22 NCBI RefSeq GCF_000321625.1-RS_2026_03_15 2026-03-15 2705 2507 80 na GCF_000321645.1 PRJNA224116 SAMN00779801 AHWQ00000000.1 na 1138889 1352 Enterococcus faecium EnGen0017 strain=EnGen0017 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1050_V1 Broad Institute GCA_000321645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/645/GCF_000321645.1_Ente_faec_E1050_V1/ na na na haploid bacteria 2814620 2800540 38.000000 0 9 24 NCBI RefSeq GCF_000321645.1-RS_2026_03_15 2026-03-15 2777 2576 93 na GCF_000321665.1 PRJNA224116 SAMN00779802 AHWR00000000.1 na 1138890 1352 Enterococcus faecium EnGen0002 strain=EnGen0002 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1133_V1 Broad Institute GCA_000321665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/665/GCF_000321665.1_Ente_faec_E1133_V1/ na na na haploid bacteria 3283576 3165800 38.000000 0 25 92 NCBI RefSeq GCF_000321665.1-RS_2026_03_15 2026-03-15 3212 3013 66 na GCF_000321685.1 PRJNA224116 SAMN00779803 AHWS00000000.1 na 1138891 1352 Enterococcus faecium EnGen0011 strain=EnGen0011 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1185_V1 Broad Institute GCA_000321685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/685/GCF_000321685.1_Ente_faec_E1185_V1/ annotation fails completeness check na na haploid bacteria 2825017 2774942 38.000000 0 11 48 NCBI RefSeq GCF_000321685.1-RS_2026_05_19 2026-05-19 2763 2521 87 na GCF_000321705.1 PRJNA224116 SAMN00779804 AHWT00000000.1 na 1138892 1352 Enterococcus faecium EnGen0004 strain=EnGen0004 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1258_V1 Broad Institute GCA_000321705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/705/GCF_000321705.1_Ente_faec_E1258_V1/ na na na haploid bacteria 2797059 2793037 38.000000 0 8 20 NCBI RefSeq GCF_000321705.1-RS_2026_03_15 2026-03-15 2732 2538 93 na GCF_000321725.1 PRJNA224116 SAMN00779806 AHWV00000000.1 na 1138894 1352 Enterococcus faecium EnGen0016 strain=E1392 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1392_V1 Broad Institute GCA_000321725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/725/GCF_000321725.1_Ente_faec_E1392_V1/ na na na haploid bacteria 3254222 3157483 37.500000 0 39 78 NCBI RefSeq GCF_000321725.1-RS_2026_01_19 2026-01-19 3186 2988 76 na GCF_000321745.1 PRJNA224116 SAMN00779807 AHWW00000000.1 na 1138895 1352 Enterococcus faecium EnGen0021 strain=EnGen0021 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1552_V1 Broad Institute GCA_000321745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/745/GCF_000321745.1_Ente_faec_E1552_V1/ na na na haploid bacteria 2625727 2599539 38.000000 0 6 30 NCBI RefSeq GCF_000321745.1-RS_2026_03_15 2026-03-15 2518 2330 70 na GCF_000321765.1 PRJNA224116 SAMN00779808 AHWX00000000.1 na 1138896 1352 Enterococcus faecium EnGen0009 strain=E1573 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1573_V1 Broad Institute GCA_000321765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/765/GCF_000321765.1_Ente_faec_E1573_V1/ na na na haploid bacteria 2864230 2811059 38.000000 0 9 41 NCBI RefSeq GCF_000321765.1-RS_2026_01_15 2026-01-15 2764 2588 90 na GCF_000321785.1 PRJNA224116 SAMN00779809 AHWY00000000.1 na 1138897 1352 Enterococcus faecium EnGen0020 strain=E1574 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1574_V1 Broad Institute GCA_000321785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/785/GCF_000321785.1_Ente_faec_E1574_V1/ na na na haploid bacteria 2818717 2777687 38.000000 0 18 46 NCBI RefSeq GCF_000321785.1-RS_2026_01_16 2026-01-16 2745 2589 68 na GCF_000321805.1 PRJNA224116 SAMN00779810 AHWZ00000000.1 na 1138898 1352 Enterococcus faecium EnGen0001 strain=E1575 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1575_V1 Broad Institute GCA_000321805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/805/GCF_000321805.1_Ente_faec_E1575_V1/ na na na haploid bacteria 2777466 2683262 38.000000 0 19 100 NCBI RefSeq GCF_000321805.1-RS_2026_01_18 2026-01-18 2656 2400 76 na GCF_000321825.1 PRJNA224116 SAMN00779812 AHXA00000000.1 na 1138899 1352 Enterococcus faecium EnGen0018 strain=E1576 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1576_V1 Broad Institute GCA_000321825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/825/GCF_000321825.1_Ente_faec_E1576_V1/ na na na haploid bacteria 2713803 2682322 38.000000 0 36 56 NCBI RefSeq GCF_000321825.1-RS_2026_01_19 2026-01-19 2585 2441 75 na GCF_000321845.1 PRJNA224116 SAMN00779813 AHXB00000000.1 na 1138900 1352 Enterococcus faecium EnGen0007 strain=EnGen0007 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1578_V1 Broad Institute GCA_000321845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/845/GCF_000321845.1_Ente_faec_E1578_V1/ na na na haploid bacteria 2694048 2663393 38.000000 0 3 29 NCBI RefSeq GCF_000321845.1-RS_2025_08_19 2025-08-19 2613 2450 90 na GCF_000321865.1 PRJNA224116 SAMN00779814 AHXC00000000.1 na 1138901 1352 Enterococcus faecium EnGen0003 strain=EnGen0003 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1590_V1 Broad Institute GCA_000321865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/865/GCF_000321865.1_Ente_faec_E1590_V1/ na na na haploid bacteria 3021653 3009500 38.000000 0 14 28 NCBI RefSeq GCF_000321865.1-RS_2026_03_15 2026-03-15 2964 2778 77 na GCF_000321885.1 PRJNA224116 SAMN00779815 AHXD00000000.1 na 1138902 1352 Enterococcus faecium EnGen0028 strain=E1604 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1604_V1 Broad Institute GCA_000321885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/885/GCF_000321885.1_Ente_faec_E1604_V1/ na na na haploid bacteria 2888030 2834422 38.500000 0 5 35 NCBI RefSeq GCF_000321885.1-RS_2026_01_21 2026-01-21 2811 2606 75 na GCF_000321905.1 PRJNA224116 SAMN00779816 AHXE00000000.1 na 1138903 1352 Enterococcus faecium EnGen0029 strain=E1613 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1613_V1 Broad Institute GCA_000321905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/905/GCF_000321905.1_Ente_faec_E1613_V1/ na na na haploid bacteria 2918964 2874670 38.000000 0 11 47 NCBI RefSeq GCF_000321905.1-RS_2026_01_21 2026-01-21 2845 2599 83 na GCF_000321925.1 PRJNA224116 SAMN00779817 AHXF00000000.1 na 1138904 1352 Enterococcus faecium EnGen0027 strain=EnGen0027 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1620_V1 Broad Institute GCA_000321925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/925/GCF_000321925.1_Ente_faec_E1620_V1/ na na na haploid bacteria 2576211 2468918 38.000000 0 5 91 NCBI RefSeq GCF_000321925.1-RS_2026_03_15 2026-03-15 2419 2205 60 na GCF_000321945.1 PRJNA224116 SAMN00779818 AHXG00000000.1 na 1138905 1352 Enterococcus faecium EnGen0032 strain=E1622 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1622_V1 Broad Institute GCA_000321945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/945/GCF_000321945.1_Ente_faec_E1622_V1/ na na na haploid bacteria 2617428 2612255 38.000000 0 6 17 NCBI RefSeq GCF_000321945.1-RS_2026_01_19 2026-01-19 2538 2396 71 na GCF_000321965.1 PRJNA224116 SAMN00779819 AHXH00000000.1 na 1138906 1352 Enterococcus faecium EnGen0031 strain=EnGen0031 na latest Scaffold Major Full 2013-01-25 Ente_faec_E1623_V1 Broad Institute GCA_000321965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/965/GCF_000321965.1_Ente_faec_E1623_V1/ na na na haploid bacteria 2809639 2796571 38.000000 0 22 35 NCBI RefSeq GCF_000321965.1-RS_2026_03_15 2026-03-15 2760 2598 80 na GCF_000321985.1 PRJNA224116 SAMN00779820 AHXI00000000.1 na 1138907 1352 Enterococcus faecium EnGen0025 strain=EnGen0025 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1626_V1 Broad Institute GCA_000321985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/321/985/GCF_000321985.1_Ente_faec_E1626_V1/ na na na haploid bacteria 2910328 2876634 37.500000 0 43 71 NCBI RefSeq GCF_000321985.1-RS_2026_03_15 2026-03-15 2815 2644 71 na GCF_000322005.1 PRJNA224116 SAMN00779821 AHXJ00000000.1 na 1138908 1352 Enterococcus faecium EnGen0035 strain=EnGen0035 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1627_V1 Broad Institute GCA_000322005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/005/GCF_000322005.1_Ente_faec_E1627_V1/ na na na haploid bacteria 2695978 2684768 38.000000 0 22 36 NCBI RefSeq GCF_000322005.1-RS_2026_03_15 2026-03-15 2627 2436 80 na GCF_000322025.1 PRJNA224116 SAMN00779823 AHXK00000000.1 na 1138909 1352 Enterococcus faecium EnGen0039 strain=E1630 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1630_V1 Broad Institute GCA_000322025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/025/GCF_000322025.1_Ente_faec_E1630_V1/ na na na haploid bacteria 2822122 2770813 38.000000 0 21 71 NCBI RefSeq GCF_000322025.1-RS_2026_01_18 2026-01-18 2810 2515 87 na GCF_000322045.1 PRJNA224116 SAMN00779824 AHXL00000000.1 na 1138910 1352 Enterococcus faecium EnGen0040 strain=E1634 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1634_V1 Broad Institute GCA_000322045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/045/GCF_000322045.1_Ente_faec_E1634_V1/ na na na haploid bacteria 2625300 2608082 38.000000 0 6 25 NCBI RefSeq GCF_000322045.1-RS_2026_01_23 2026-01-23 2554 2357 89 na GCF_000322065.1 PRJNA224116 SAMN00779827 AHXO00000000.1 na 1138913 1352 Enterococcus faecium EnGen0036 strain=EnGen0036 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1731_V1 Broad Institute GCA_000322065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/065/GCF_000322065.1_Ente_faec_E1731_V1/ na na na haploid bacteria 2991719 2963844 38.000000 0 23 58 NCBI RefSeq GCF_000322065.1-RS_2026_03_15 2026-03-15 2969 2761 79 na GCF_000322085.1 PRJNA224116 SAMN00779828 AHXP00000000.1 na 1138914 1352 Enterococcus faecium EnGen0042 strain=EnGen0042 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1861_V1 Broad Institute GCA_000322085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/085/GCF_000322085.1_Ente_faec_E1861_V1/ na na na haploid bacteria 2789424 2774929 38.500000 0 8 25 NCBI RefSeq GCF_000322085.1-RS_2026_03_15 2026-03-15 2727 2507 82 na GCF_000322105.1 PRJNA224116 SAMN00779829 AHXQ00000000.1 na 1138915 1352 Enterococcus faecium EnGen0024 strain=EnGen0024 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1904_V1 Broad Institute GCA_000322105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/105/GCF_000322105.1_Ente_faec_E1904_V1/ na na na haploid bacteria 3276366 3081103 37.500000 0 34 138 NCBI RefSeq GCF_000322105.1-RS_2026_03_15 2026-03-15 3186 2887 83 na GCF_000322125.1 PRJNA224116 SAMN00779830 AHXR00000000.1 na 1138916 1352 Enterococcus faecium EnGen0033 strain=EnGen0033 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1972_V1 Broad Institute GCA_000322125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/125/GCF_000322125.1_Ente_faec_E1972_V1/ na na na haploid bacteria 2915788 2886498 38.000000 0 7 35 NCBI RefSeq GCF_000322125.1-RS_2026_03_15 2026-03-15 2867 2648 72 na GCF_000322145.1 PRJNA224116 SAMN00779831 AHXS00000000.1 na 1138917 1352 Enterococcus faecium EnGen0026 strain=E2039 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2039_V1 Broad Institute GCA_000322145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/145/GCF_000322145.1_Ente_faec_E2039_V1/ na na na haploid bacteria 2925679 2908349 38.000000 0 11 34 NCBI RefSeq GCF_000322145.1-RS_2026_01_21 2026-01-21 2887 2631 99 na GCF_000322165.1 PRJNA224116 SAMN00779832 AHXT00000000.1 na 1138918 1352 Enterococcus faecium EnGen0044 strain=E2071 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2071_V1 Broad Institute GCA_000322165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/165/GCF_000322165.1_Ente_faec_E2071_V1/ na na na haploid bacteria 2716267 2694238 38.000000 0 14 32 NCBI RefSeq GCF_000322165.1-RS_2026_01_15 2026-01-15 2649 2495 78 na GCF_000322185.1 PRJNA224116 SAMN00779834 AHXU00000000.1 na 1138919 1352 Enterococcus faecium EnGen0043 strain=E2134 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2134_V1 Broad Institute GCA_000322185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/185/GCF_000322185.1_Ente_faec_E2134_V1/ na na na haploid bacteria 2818524 2708822 38.000000 0 6 89 NCBI RefSeq GCF_000322185.1-RS_2026_01_18 2026-01-18 2685 2479 52 na GCF_000322205.1 PRJNA224116 SAMN00779835 AHXV00000000.1 na 1138920 1352 Enterococcus faecium EnGen0034 strain=EnGen0034 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2297_V1 Broad Institute GCA_000322205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/205/GCF_000322205.1_Ente_faec_E2297_V1/ na na na haploid bacteria 3132699 3064549 37.500000 0 19 69 NCBI RefSeq GCF_000322205.1-RS_2026_03_15 2026-03-15 3081 2878 86 na GCF_000322225.1 PRJNA224116 SAMN00779836 AHXW00000000.1 na 1138921 1352 Enterococcus faecium EnGen0038 strain=EnGen0038 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2620_V1 Broad Institute GCA_000322225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/225/GCF_000322225.1_Ente_faec_E2620_V1/ na na na haploid bacteria 2809336 2793179 38.000000 0 4 26 NCBI RefSeq GCF_000322225.1-RS_2026_03_15 2026-03-15 2737 2514 77 na GCF_000322245.1 PRJNA224116 SAMN00779837 AHXX00000000.1 na 1138922 1352 Enterococcus faecium EnGen0030 strain=EnGen0030 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2883_V1 Broad Institute GCA_000322245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/245/GCF_000322245.1_Ente_faec_E2883_V1/ na na na haploid bacteria 2750349 2713962 38.000000 0 7 33 NCBI RefSeq GCF_000322245.1-RS_2026_03_15 2026-03-15 2660 2520 67 na GCF_000322265.1 PRJNA224116 SAMN00779839 AHXZ00000000.1 na 1138924 1352 Enterococcus faecium EnGen0056 strain=EnGen0056 na latest Scaffold Major Full 2013-03-21 Ente_faec_E3083_V1 Broad Institute GCA_000322265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/265/GCF_000322265.1_Ente_faec_E3083_V1/ na na na haploid bacteria 2715722 2712262 38.500000 0 6 11 NCBI RefSeq GCF_000322265.1-RS_2026_03_15 2026-03-15 2599 2474 71 na GCF_000322285.1 PRJNA224116 SAMN00779840 AHYA00000000.1 na 1138925 1352 Enterococcus faecium EnGen0052 strain=EnGen0052 na latest Scaffold Major Full 2013-03-21 Ente_faec_E3346_V1 Broad Institute GCA_000322285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/285/GCF_000322285.1_Ente_faec_E3346_V1/ na na na haploid bacteria 2738725 2705507 38.000000 0 16 57 NCBI RefSeq GCF_000322285.1-RS_2026_03_15 2026-03-15 2703 2429 73 na GCF_000322305.1 PRJNA224116 SAMN00779841 AHYB00000000.1 na 1138926 1352 Enterococcus faecium EnGen0047 strain=EnGen0047 na latest Scaffold Major Full 2013-03-21 Ente_faec_E3548_V1 Broad Institute GCA_000322305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/305/GCF_000322305.1_Ente_faec_E3548_V1/ na na na haploid bacteria 2743739 2719955 38.500000 0 5 19 NCBI RefSeq GCF_000322305.1-RS_2026_03_15 2026-03-15 2606 2490 69 na GCF_000322325.1 PRJNA224116 SAMN00779845 AHYE00000000.1 na 1138929 1352 Enterococcus faecium EnGen0048 strain=E4215 na latest Scaffold Major Full 2013-03-21 Ente_faec_E4215_V1 Broad Institute GCA_000322325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/325/GCF_000322325.1_Ente_faec_E4215_V1/ na na na haploid bacteria 2646889 2600560 38.000000 0 19 79 NCBI RefSeq GCF_000322325.1-RS_2026_01_23 2026-01-23 2569 2322 87 na GCF_000322345.1 PRJNA224116 SAMN00779846 AHYF00000000.1 na 1138930 1352 Enterococcus faecium EnGen0054 strain=EnGen0054 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1321_V1 Broad Institute GCA_000322345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/345/GCF_000322345.1_Ente_faec_E1321_V1/ na na na haploid bacteria 2807406 2766366 38.000000 0 22 52 NCBI RefSeq GCF_000322345.1-RS_2026_03_15 2026-03-15 2717 2559 70 na GCF_000322365.1 PRJNA224116 SAMN00779847 AHYG00000000.1 na 1138931 1352 Enterococcus faecium EnGen0051 strain=E1644 na latest Scaffold Major Full 2013-03-21 Ente_faec_E1644_V1 Broad Institute GCA_000322365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/365/GCF_000322365.1_Ente_faec_E1644_V1/ na na na haploid bacteria 2963772 2892458 38.000000 0 21 67 NCBI RefSeq GCF_000322365.1-RS_2026_01_11 2026-01-11 2926 2727 74 na GCF_000322385.1 PRJNA224116 SAMN00779848 AHYH00000000.1 na 1138932 1352 Enterococcus faecium EnGen0050 strain=E2369 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2369_V1 Broad Institute GCA_000322385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/385/GCF_000322385.1_Ente_faec_E2369_V1/ na na na haploid bacteria 3001305 2927142 38.000000 0 21 67 NCBI RefSeq GCF_000322385.1-RS_2026_01_11 2026-01-11 2965 2772 79 na GCF_000322405.1 PRJNA224116 SAMN00779849 AHYI00000000.1 na 1138933 1352 Enterococcus faecium EnGen0046 strain=EnGen0046 na latest Scaffold Major Full 2013-03-21 Ente_faec_E2560_V1 Broad Institute GCA_000322405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/405/GCF_000322405.1_Ente_faec_E2560_V1/ na na na haploid bacteria 3077043 3032801 37.500000 0 27 60 NCBI RefSeq GCF_000322405.1-RS_2026_03_15 2026-03-15 3037 2846 71 na GCF_000322425.1 PRJNA224116 SAMN00779850 AHYJ00000000.1 na 1138934 1352 Enterococcus faecium EnGen0057 strain=E4389 na latest Scaffold Major Full 2013-01-25 Ente_faec_E4389_V1 Broad Institute GCA_000322425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/425/GCF_000322425.1_Ente_faec_E4389_V1/ na na na haploid bacteria 2941341 2896636 38.000000 0 16 61 NCBI RefSeq GCF_000322425.1-RS_2026_01_11 2026-01-11 2865 2687 77 na GCF_000322445.1 PRJNA224116 SAMN00779851 AHYK00000000.1 na 1138935 1352 Enterococcus faecium EnGen0045 strain=E6012 na latest Scaffold Major Full 2013-03-21 Ente_faec_E6012_V1 Broad Institute GCA_000322445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/445/GCF_000322445.1_Ente_faec_E6012_V1/ na na na haploid bacteria 3104022 3036302 37.500000 0 55 105 NCBI RefSeq GCF_000322445.1-RS_2026_01_11 2026-01-11 3050 2860 80 na GCF_000322465.1 PRJNA224116 SAMN00779852 AHYL00000000.1 na 1138936 1352 Enterococcus faecium EnGen0049 strain=E6045 na latest Scaffold Major Full 2013-03-21 Ente_faec_E6045_V1 Broad Institute GCA_000322465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/465/GCF_000322465.1_Ente_faec_E6045_V1/ na na na haploid bacteria 3023014 2982276 37.500000 0 33 79 NCBI RefSeq GCF_000322465.1-RS_2026_01_11 2026-01-11 3003 2812 76 na GCF_000322485.1 PRJNA224116 SAMN02436256 ANQW00000000.1 na 1154949 1311 Streptococcus agalactiae GB00919 strain=GB00919 na latest Contig Major Full 2012-12-17 ASM32248v1 The J. Craig Venter Institute GCA_000322485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/485/GCF_000322485.1_ASM32248v1/ na na na haploid bacteria 2256790 2256790 35.500000 0 43 43 NCBI RefSeq GCF_000322485.1-RS_2026_02_17 2026-02-17 2325 2182 48 na GCF_000322505.1 PRJNA224116 SAMN02436308 ANQP00000000.1 na 1154969 1311 Streptococcus agalactiae GB00999 strain=GB00999 na latest Contig Major Full 2012-12-17 ASM32250v1 The J. Craig Venter Institute GCA_000322505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/505/GCF_000322505.1_ASM32250v1/ na na na haploid bacteria 2096014 2096014 35.500000 0 22 22 NCBI RefSeq GCF_000322505.1-RS_2026_02_17 2026-02-17 2109 1995 40 na GCF_000322525.1 PRJNA224116 SAMN02436213 ANQM00000000.1 na 1154837 1311 Streptococcus agalactiae MRI Z1-200 strain=MRI Z1-200 na latest Contig Major Full 2012-12-17 ASM32252v1 The J. Craig Venter Institute GCA_000322525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/525/GCF_000322525.1_ASM32252v1/ na na na haploid bacteria 2069548 2069548 35.500000 0 22 22 NCBI RefSeq GCF_000322525.1-RS_2026_02_17 2026-02-17 2100 1980 45 na GCF_000322545.1 PRJNA224116 SAMN02436251 ANQL00000000.1 na 1154838 1311 Streptococcus agalactiae MRI Z1-201 strain=MRI Z1-201 na latest Contig Major Full 2012-12-17 ASM32254v1 The J. Craig Venter Institute GCA_000322545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/545/GCF_000322545.1_ASM32254v1/ na na na haploid bacteria 2014816 2014816 35.500000 0 19 19 NCBI RefSeq GCF_000322545.1-RS_2026_02_17 2026-02-17 2014 1883 54 na GCF_000322565.1 PRJNA224116 SAMN02436209 ANPZ00000000.1 na 1154779 1311 Streptococcus agalactiae FSL S3-034 strain=FSL S3-034 na latest Contig Major Full 2012-12-17 ASM32256v1 The J. Craig Venter Institute GCA_000322565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/565/GCF_000322565.1_ASM32256v1/ na na na haploid bacteria 2255888 2255888 35.500000 0 106 106 NCBI RefSeq GCF_000322565.1-RS_2026_02_17 2026-02-17 2358 2173 51 na GCF_000322585.1 PRJNA224116 SAMN02436304 ANPU00000000.1 na 1154785 1311 Streptococcus agalactiae FSL S3-027 strain=FSL S3-027 na latest Contig Major Full 2012-12-17 ASM32258v1 The J. Craig Venter Institute GCA_000322585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/585/GCF_000322585.1_ASM32258v1/ na na na haploid bacteria 2167442 2167442 35.500000 0 123 123 NCBI RefSeq GCF_000322585.1-RS_2026_02_17 2026-02-17 2208 2087 18 na GCF_000322605.1 PRJNA224116 SAMN02436187 ANPR00000000.1 na 1154793 1311 Streptococcus agalactiae FSL S3-568 strain=FSL S3-568 na latest Contig Major Full 2012-12-17 ASM32260v1 The J. Craig Venter Institute GCA_000322605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/605/GCF_000322605.1_ASM32260v1/ na na na haploid bacteria 2201209 2201209 35.500000 0 202 202 NCBI RefSeq GCF_000322605.1-RS_2026_02_17 2026-02-17 2295 2132 21 na GCF_000322625.1 PRJNA224116 SAMN00991070 ANPQ00000000.1 na 1154803 1311 Streptococcus agalactiae FSL F2-338 strain=FSL F2-338 na latest Contig Major Full 2012-12-17 ASM32262v1 The J. Craig Venter Institute GCA_000322625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/625/GCF_000322625.1_ASM32262v1/ na na na haploid bacteria 2162773 2162773 36.000000 0 69 69 NCBI RefSeq GCF_000322625.1-RS_2026_02_17 2026-02-17 2151 2015 72 na GCF_000322645.1 PRJNA224116 SAMN02436255 ANQT00000000.1 na 1154959 1311 Streptococcus agalactiae GB00954 strain=GB00954 na latest Contig Major Full 2012-12-17 ASM32264v1 The J. Craig Venter Institute GCA_000322645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/645/GCF_000322645.1_ASM32264v1/ na na na haploid bacteria 2092940 2092940 35.500000 0 91 91 NCBI RefSeq GCF_000322645.1-RS_2026_02_17 2026-02-17 2133 1980 49 na GCF_000322665.1 PRJNA224116 SAMN02436214 ANQQ00000000.1 na 1154964 1311 Streptococcus agalactiae GB00965 strain=GB00965 na latest Contig Major Full 2012-12-17 ASM32266v1 The J. Craig Venter Institute GCA_000322665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/665/GCF_000322665.1_ASM32266v1/ na na na haploid bacteria 2057969 2057969 35.500000 0 37 37 NCBI RefSeq GCF_000322665.1-RS_2026_02_17 2026-02-17 2080 1979 36 na GCF_000322685.1 PRJNA224116 SAMN02436252 ANQN00000000.1 na 1154971 1311 Streptococcus agalactiae GB01004 strain=GB01004 na latest Contig Major Full 2012-12-17 ASM32268v1 The J. Craig Venter Institute GCA_000322685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/685/GCF_000322685.1_ASM32268v1/ na na na haploid bacteria 2061175 2061175 35.500000 0 82 82 NCBI RefSeq GCF_000322685.1-RS_2026_02_17 2026-02-17 2056 1895 60 na GCF_000322705.1 PRJNA224116 SAMN02436258 ANQJ00000000.1 na 1154840 1311 Streptococcus agalactiae MRI Z1-203 strain=MRI Z1-203 na latest Contig Major Full 2012-12-17 ASM32270v1 The J. Craig Venter Institute GCA_000322705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/705/GCF_000322705.1_ASM32270v1/ na na na haploid bacteria 2025148 2025148 35.500000 0 20 20 NCBI RefSeq GCF_000322705.1-RS_2026_02_17 2026-02-17 2047 1929 47 na GCF_000322725.1 PRJNA224116 SAMN02436211 ANQG00000000.1 na 1154843 1311 Streptococcus agalactiae MRI Z1-206 strain=MRI Z1-206 na latest Contig Major Full 2012-12-17 ASM32272v1 The J. Craig Venter Institute GCA_000322725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/725/GCF_000322725.1_ASM32272v1/ na na na haploid bacteria 2061874 2061874 35.500000 0 22 22 NCBI RefSeq GCF_000322725.1-RS_2026_02_17 2026-02-17 2079 1972 49 na GCF_000322785.1 PRJNA224116 SAMN02436189 ANQA00000000.1 na 1154778 1311 Streptococcus agalactiae FSL S3-608 strain=FSL S3-608 na latest Contig Major Full 2012-12-17 ASM32278v1 The J. Craig Venter Institute GCA_000322785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/785/GCF_000322785.1_ASM32278v1/ na na na haploid bacteria 2462100 2462100 36.000000 0 108 108 NCBI RefSeq GCF_000322785.1-RS_2025_07_15 2025-07-15 2522 2310 58 na GCF_000322805.1 PRJNA224116 SAMN02436215 ANPY00000000.1 na 1154772 1311 Streptococcus agalactiae FSL S3-077 strain=FSL S3-077 na latest Contig Major Full 2012-12-17 ASM32280v1 The J. Craig Venter Institute GCA_000322805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/805/GCF_000322805.1_ASM32280v1/ na na na haploid bacteria 2292966 2292966 35.500000 0 91 91 NCBI RefSeq GCF_000322805.1-RS_2026_02_17 2026-02-17 2381 2202 35 na GCF_000322825.1 PRJNA224116 SAMN02436188 ANPX00000000.1 na 1154773 1311 Streptococcus agalactiae FSL S3-654 strain=FSL S3-654 na latest Contig Major Full 2012-12-17 ASM32282v1 The J. Craig Venter Institute GCA_000322825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/825/GCF_000322825.1_ASM32282v1/ na na na haploid bacteria 2271827 2271827 35.500000 0 102 102 NCBI RefSeq GCF_000322825.1-RS_2026_02_17 2026-02-17 2390 2201 59 na GCF_000322845.1 PRJNA224116 SAMN00993320 ANPP00000000.1 na 1154881 1311 Streptococcus agalactiae MRI Z1-218 strain=MRI Z1-218 na latest Contig Major Full 2012-12-17 ASM32284v1 The J. Craig Venter Institute GCA_000322845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/845/GCF_000322845.1_ASM32284v1/ na na na haploid bacteria 2093520 2093520 35.000000 0 25 25 NCBI RefSeq GCF_000322845.1-RS_2026_02_17 2026-02-17 2123 1999 54 na GCF_000322865.1 PRJNA224116 SAMN02436309 ANQX00000000.1 na 1154943 1311 Streptococcus agalactiae GB00900 strain=GB00900 na latest Contig Major Full 2012-12-17 ASM32286v1 The J. Craig Venter Institute GCA_000322865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/865/GCF_000322865.1_ASM32286v1/ na na na haploid bacteria 2192452 2192452 35.500000 0 49 49 NCBI RefSeq GCF_000322865.1-RS_2026_02_17 2026-02-17 2243 2109 52 na GCF_000322885.1 PRJNA224116 SAMN02436193 ANQV00000000.1 na 1154956 1311 Streptococcus agalactiae GB00940 strain=GB00940 na latest Contig Major Full 2012-12-17 ASM32288v1 The J. Craig Venter Institute GCA_000322885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/885/GCF_000322885.1_ASM32288v1/ na na na haploid bacteria 1998629 1998629 35.500000 0 51 51 NCBI RefSeq GCF_000322885.1-RS_2026_02_17 2026-02-17 1994 1854 40 na GCF_000322905.1 PRJNA224116 SAMN02436192 ANQU00000000.1 na 1154958 1311 Streptococcus agalactiae GB00951 strain=GB00951 na latest Contig Major Full 2012-12-17 ASM32290v1 The J. Craig Venter Institute GCA_000322905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/905/GCF_000322905.1_ASM32290v1/ na na na haploid bacteria 2050188 2050188 35.000000 0 36 36 NCBI RefSeq GCF_000322905.1-RS_2026_02_17 2026-02-17 2032 1927 28 na GCF_000322925.1 PRJNA224116 SAMN02436254 ANQS00000000.1 na 1154961 1311 Streptococcus agalactiae GB00957 strain=GB00957 na latest Contig Major Full 2012-12-17 ASM32292v1 The J. Craig Venter Institute GCA_000322925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/925/GCF_000322925.1_ASM32292v1/ na na na haploid bacteria 1978496 1978496 35.000000 0 29 29 NCBI RefSeq GCF_000322925.1-RS_2026_02_17 2026-02-17 1975 1858 43 na GCF_000322945.1 PRJNA224116 SAMN02436253 ANQR00000000.1 na 1154963 1311 Streptococcus agalactiae GB00963 strain=GB00963 na latest Contig Major Full 2012-12-17 ASM32294v1 The J. Craig Venter Institute GCA_000322945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/945/GCF_000322945.1_ASM32294v1/ na na na haploid bacteria 2049321 2049321 35.000000 0 35 35 NCBI RefSeq GCF_000322945.1-RS_2026_02_17 2026-02-17 2068 1906 49 na GCF_000322965.1 PRJNA224116 SAMN02436307 ANQO00000000.1 na 1154970 1311 Streptococcus agalactiae GB01003 strain=GB01003 na latest Contig Major Full 2012-12-17 ASM32296v1 The J. Craig Venter Institute GCA_000322965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/965/GCF_000322965.1_ASM32296v1/ na na na haploid bacteria 2037862 2037862 35.000000 0 21 21 NCBI RefSeq GCF_000322965.1-RS_2026_02_17 2026-02-17 2042 1935 42 na GCF_000322985.1 PRJNA224116 SAMN02436191 ANQK00000000.1 na 1154839 1311 Streptococcus agalactiae MRI Z1-202 strain=MRI Z1-202 na latest Contig Major Full 2012-12-17 ASM32298v1 The J. Craig Venter Institute GCA_000322985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/322/985/GCF_000322985.1_ASM32298v1/ na na na haploid bacteria 1968442 1968442 35.500000 0 18 18 NCBI RefSeq GCF_000322985.1-RS_2026_02_17 2026-02-17 1971 1839 61 na GCF_000323005.1 PRJNA224116 SAMN02436212 ANQI00000000.1 na 1154841 1311 Streptococcus agalactiae MRI Z1-204 strain=MRI Z1-204 na latest Contig Major Full 2012-12-17 ASM32300v1 The J. Craig Venter Institute GCA_000323005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/005/GCF_000323005.1_ASM32300v1/ na na na haploid bacteria 2007539 2007539 35.000000 0 18 18 NCBI RefSeq GCF_000323005.1-RS_2026_02_17 2026-02-17 2032 1916 47 na GCF_000323025.1 PRJNA224116 SAMN02436306 ANQH00000000.1 na 1154842 1311 Streptococcus agalactiae MRI Z1-205 strain=MRI Z1-205 na latest Contig Major Full 2012-12-17 ASM32302v1 The J. Craig Venter Institute GCA_000323025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/025/GCF_000323025.1_ASM32302v1/ na na na haploid bacteria 2128084 2128084 35.500000 0 24 24 NCBI RefSeq GCF_000323025.1-RS_2026_02_17 2026-02-17 2160 2033 53 na GCF_000323045.1 PRJNA224116 SAMN02436257 ANQE00000000.1 na 1154844 1311 Streptococcus agalactiae STIR-CD-01 strain=STIR-CD-01 na latest Contig Major Full 2012-12-17 ASM32304v1 The J. Craig Venter Institute GCA_000323045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/045/GCF_000323045.1_ASM32304v1/ na na na haploid bacteria 2086054 2086054 35.500000 0 42 42 NCBI RefSeq GCF_000323045.1-RS_2026_02_17 2026-02-17 2087 1965 48 na GCF_000323085.1 PRJNA224116 SAMN02436210 ANQB00000000.1 na 1154862 1311 Streptococcus agalactiae CCUG 34230 strain=CCUG 34230 na latest Contig Major Full 2012-12-17 ASM32308v1 The J. Craig Venter Institute GCA_000323085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/085/GCF_000323085.1_ASM32308v1/ na na na haploid bacteria 2168689 2168689 35.500000 0 16 16 NCBI RefSeq GCF_000323085.1-RS_2026_02_17 2026-02-17 2163 2055 43 na GCF_000323105.1 PRJNA224116 SAMN01888211 ANPW00000000.1 na 1154780 1311 Streptococcus agalactiae FSL S3-222 strain=FSL S3-222 na latest Contig Major Full 2012-12-17 ASM32310v1 The J. Craig Venter Institute GCA_000323105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/105/GCF_000323105.1_ASM32310v1/ na na na haploid bacteria 2207119 2207119 35.500000 0 101 101 NCBI RefSeq GCF_000323105.1-RS_2026_02_17 2026-02-17 2215 2104 16 na GCF_000323125.1 PRJNA224116 SAMN01888210 ANPV00000000.1 na 1154784 1311 Streptococcus agalactiae FSL S3-229 strain=FSL S3-229 na latest Contig Major Full 2012-12-17 ASM32312v1 The J. Craig Venter Institute GCA_000323125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/125/GCF_000323125.1_ASM32312v1/ na na na haploid bacteria 2203178 2203178 35.500000 0 94 94 NCBI RefSeq GCF_000323125.1-RS_2026_02_17 2026-02-17 2232 2107 19 na GCF_000323145.1 PRJNA224116 SAMN01888214 ANPT00000000.1 na 1154787 1311 Streptococcus agalactiae FSL S3-043 strain=FSL S3-043 na latest Contig Major Full 2012-12-17 ASM32314v1 The J. Craig Venter Institute GCA_000323145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/145/GCF_000323145.1_ASM32314v1/ na na na haploid bacteria 2101160 2101160 35.500000 0 185 185 NCBI RefSeq GCF_000323145.1-RS_2026_02_17 2026-02-17 2152 1997 20 na GCF_000323165.1 PRJNA224116 SAMN01888209 ANPS00000000.1 na 1154791 1311 Streptococcus agalactiae FSL S3-128 strain=FSL S3-128 na latest Contig Major Full 2012-12-17 ASM32316v1 The J. Craig Venter Institute GCA_000323165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/165/GCF_000323165.1_ASM32316v1/ na na na haploid bacteria 2207119 2207119 35.500000 0 101 101 NCBI RefSeq GCF_000323165.1-RS_2026_02_17 2026-02-17 2215 2104 16 na GCF_000323185.1 PRJNA224116 SAMN02402992 ADOW00000000.1 na 755861 632 Yersinia pestis 164 strain=164 na latest Contig Major Full 2012-12-07 ASM32318v1 Beijing Genomics Institute GCA_000323185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/185/GCF_000323185.1_ASM32318v1/ na na na haploid bacteria 4444813 4444813 48.000000 0 1053 1053 NCBI RefSeq GCF_000323185.1-RS_2026_03_28 2026-03-28 4322 3949 34 23271803 GCF_000323205.1 PRJNA224116 SAMN02402995 ADOZ00000000.1 na 755863 632 Yersinia pestis 2504 strain=2504 na latest Contig Major Full 2012-12-07 ASM32320v1 Beijing Genomics Institute GCA_000323205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/205/GCF_000323205.1_ASM32320v1/ na na na haploid bacteria 4475655 4475655 47.500000 0 975 975 NCBI RefSeq GCF_000323205.1-RS_2026_03_21 2026-03-21 4364 4032 24 23271803 GCF_000323225.1 PRJNA224116 SAMN02402996 ADPA00000000.1 na 755864 632 Yersinia pestis 2506 strain=2506 na latest Contig Major Full 2012-12-07 ASM32322v1 Beijing Genomics Institute GCA_000323225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/225/GCF_000323225.1_ASM32322v1/ na na na haploid bacteria 4488493 4488493 47.500000 0 820 820 NCBI RefSeq GCF_000323225.1-RS_2026_03_21 2026-03-21 4258 3941 32 23271803 GCF_000323285.1 PRJNA224116 SAMN02402998 ADPC00000000.1 na 755867 632 Yersinia pestis 30017 strain=30017 na latest Contig Major Full 2012-12-07 ASM32328v1 Beijing Genomics Institute GCA_000323285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/285/GCF_000323285.1_ASM32328v1/ na na na haploid bacteria 4591472 4591472 47.500000 0 747 747 NCBI RefSeq GCF_000323285.1-RS_2026_03_28 2026-03-28 4307 4025 33 23271803 GCF_000323305.1 PRJNA224116 SAMN02402999 ADPD00000000.1 na 755869 632 Yersinia pestis 34008 strain=34008 na latest Contig Major Full 2012-12-07 ASM32330v1 Beijing Genomics Institute GCA_000323305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/305/GCF_000323305.1_ASM32330v1/ na na na haploid bacteria 4375742 4375742 48.000000 0 1074 1074 NCBI RefSeq GCF_000323305.1-RS_2026_03_28 2026-03-28 4263 3872 32 23271803 GCF_000323325.1 PRJNA224116 SAMN02403000 ADPE00000000.1 na 755870 632 Yersinia pestis 34202 strain=34202 na latest Contig Major Full 2012-12-07 ASM32332v1 Beijing Genomics Institute GCA_000323325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/325/GCF_000323325.1_ASM32332v1/ na na na haploid bacteria 4504947 4504947 47.500000 0 1237 1237 NCBI RefSeq GCF_000323325.1-RS_2026_03_21 2026-03-21 4537 4116 34 23271803 GCF_000323345.1 PRJNA224116 SAMN02403001 ADPF00000000.1 na 755871 632 Yersinia pestis 351001 strain=351001 na latest Contig Major Full 2012-12-07 ASM32334v1 Beijing Genomics Institute GCA_000323345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/345/GCF_000323345.1_ASM32334v1/ na na na haploid bacteria 4433848 4433848 48.000000 0 1332 1332 NCBI RefSeq GCF_000323345.1-RS_2026_03_21 2026-03-21 4470 4017 34 23271803 GCF_000323365.1 PRJNA224116 SAMN02403002 ADPG00000000.1 na 755875 632 Yersinia pestis 42013 strain=42013 na latest Contig Major Full 2012-12-07 ASM32336v1 Beijing Genomics Institute GCA_000323365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/365/GCF_000323365.1_ASM32336v1/ na na na haploid bacteria 4495101 4495101 47.500000 0 877 877 NCBI RefSeq GCF_000323365.1-RS_2026_03_28 2026-03-28 4292 3968 34 23271803 GCF_000323405.1 PRJNA224116 SAMN02403004 ADPI00000000.1 na 755877 632 Yersinia pestis 42091 strain=42091 na latest Contig Major Full 2012-12-07 ASM32340v1 Beijing Genomics Institute GCA_000323405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/405/GCF_000323405.1_ASM32340v1/ na na na haploid bacteria 4495831 4495831 47.500000 0 937 937 NCBI RefSeq GCF_000323405.1-RS_2026_03_28 2026-03-28 4316 4001 34 23271803 GCF_000323425.1 PRJNA224116 SAMN02403005 ADPJ00000000.1 na 755878 632 Yersinia pestis 42095 strain=42095 na latest Contig Major Full 2012-12-07 ASM32342v1 Beijing Genomics Institute GCA_000323425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/425/GCF_000323425.1_ASM32342v1/ na na na haploid bacteria 4512584 4512584 47.500000 0 1119 1119 NCBI RefSeq GCF_000323425.1-RS_2026_03_21 2026-03-21 4482 4068 32 23271803 GCF_000323445.1 PRJNA224116 SAMN02403006 ADPK00000000.1 na 755880 632 Yersinia pestis 5 strain=5 na latest Contig Major Full 2012-12-07 ASM32344v1 Beijing Genomics Institute GCA_000323445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/445/GCF_000323445.1_ASM32344v1/ na na na haploid bacteria 4478071 4478071 47.500000 0 1008 1008 NCBI RefSeq GCF_000323445.1-RS_2026_03_21 2026-03-21 4387 4022 32 23271803 GCF_000323465.1 PRJNA224116 SAMN02403007 ADPL00000000.1 na 755860 632 Yersinia pestis 5761 strain=5761 na latest Contig Major Full 2012-12-07 ASM32346v1 Beijing Genomics Institute GCA_000323465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/465/GCF_000323465.1_ASM32346v1/ na na na haploid bacteria 4262011 4262011 47.500000 0 945 945 NCBI RefSeq GCF_000323465.1-RS_2026_03_28 2026-03-28 4096 3769 34 23271803 GCF_000323485.1 PRJNA224116 SAMN02403008 ADPM00000000.1 na 755881 632 Yersinia pestis 620024 strain=620024 na latest Contig Major Full 2012-12-07 ASM32348v1 Beijing Genomics Institute GCA_000323485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/485/GCF_000323485.1_ASM32348v1/ na na na haploid bacteria 4503786 4503786 47.500000 0 1131 1131 NCBI RefSeq GCF_000323485.1-RS_2026_03_03 2026-03-03 4465 4093 28 23271803 GCF_000323505.1 PRJNA224116 SAMN02403009 ADPN00000000.1 na 755889 632 Yersinia pestis 7 strain=7 na latest Contig Major Full 2012-12-07 ASM32350v1 Beijing Genomics Institute GCA_000323505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/505/GCF_000323505.1_ASM32350v1/ na na na haploid bacteria 4539616 4539616 47.500000 0 768 768 NCBI RefSeq GCF_000323505.1-RS_2026_03_28 2026-03-28 4261 3981 31 23271803 GCF_000323525.1 PRJNA224116 SAMN02403010 ADPO00000000.1 na 755884 632 Yersinia pestis 71021 strain=71021 na latest Contig Major Full 2012-12-07 ASM32352v1 Beijing Genomics Institute GCA_000323525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/525/GCF_000323525.1_ASM32352v1/ na na na haploid bacteria 4493411 4493411 47.500000 0 1489 1489 NCBI RefSeq GCF_000323525.1-RS_2026_03_21 2026-03-21 4681 4181 32 23271803 GCF_000323545.1 PRJNA224116 SAMN02403011 ADPP00000000.1 na 755885 632 Yersinia pestis 710317 strain=710317 na latest Contig Major Full 2012-12-07 ASM32354v1 Beijing Genomics Institute GCA_000323545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/545/GCF_000323545.1_ASM32354v1/ na na na haploid bacteria 4449879 4449879 47.500000 0 1119 1119 NCBI RefSeq GCF_000323545.1-RS_2026_03_21 2026-03-21 4410 4031 31 23271803 GCF_000323565.1 PRJNA224116 SAMN02403012 ADPQ00000000.1 na 755886 632 Yersinia pestis 7338 strain=7338 na latest Contig Major Full 2012-12-07 ASM32356v1 Beijing Genomics Institute GCA_000323565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/565/GCF_000323565.1_ASM32356v1/ na na na haploid bacteria 4344510 4344510 47.500000 0 1074 1074 NCBI RefSeq GCF_000323565.1-RS_2026_03_28 2026-03-28 4334 3958 36 23271803 GCF_000323585.1 PRJNA224116 SAMN02403013 ADPR00000000.1 na 755868 632 Yersinia pestis 735 strain=735 na latest Contig Major Full 2012-12-07 ASM32358v1 Beijing Genomics Institute GCA_000323585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/585/GCF_000323585.1_ASM32358v1/ na na na haploid bacteria 4423715 4423715 47.500000 0 882 882 NCBI RefSeq GCF_000323585.1-RS_2026_03_28 2026-03-28 4265 3967 27 23271803 GCF_000323605.1 PRJNA224116 SAMN02403014 ADPS00000000.1 na 755888 632 Yersinia pestis 780441 strain=780441 na latest Contig Major Full 2012-12-07 ASM32360v1 Beijing Genomics Institute GCA_000323605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/605/GCF_000323605.1_ASM32360v1/ na na na haploid bacteria 4525764 4525764 47.500000 0 817 817 NCBI RefSeq GCF_000323605.1-RS_2026_03_28 2026-03-28 4269 3976 31 23271803 GCF_000323625.1 PRJNA224116 SAMN02403015 ADPT00000000.1 na 755896 632 Yersinia pestis 9 strain=9 na latest Contig Major Full 2012-12-07 ASM32362v1 Beijing Genomics Institute GCA_000323625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/625/GCF_000323625.1_ASM32362v1/ na na na haploid bacteria 4452201 4452201 47.500000 0 1336 1336 NCBI RefSeq GCF_000323625.1-RS_2026_03_21 2026-03-21 4549 4098 34 23271803 GCF_000323645.1 PRJNA224116 SAMN02403016 ADPU00000000.1 na 755893 632 Yersinia pestis 91 strain=91 na latest Contig Major Full 2012-12-07 ASM32364v1 Beijing Genomics Institute GCA_000323645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/645/GCF_000323645.1_ASM32364v1/ na na na haploid bacteria 4366271 4366271 47.500000 0 906 906 NCBI RefSeq GCF_000323645.1-RS_2026_03_28 2026-03-28 4207 3883 32 23271803 GCF_000323665.1 PRJNA224116 SAMN02403017 ADPV00000000.1 na 755894 632 Yersinia pestis 945 strain=945 na latest Contig Major Full 2012-12-07 ASM32366v1 Beijing Genomics Institute GCA_000323665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/665/GCF_000323665.1_ASM32366v1/ na na na haploid bacteria 4226749 4226749 48.000000 0 1243 1243 NCBI RefSeq GCF_000323665.1-RS_2026_06_14 2026-06-14 4202 3755 33 23271803 GCF_000323685.1 PRJNA224116 SAMN02403018 ADPW00000000.1 na 755895 632 Yersinia pestis 970754 strain=970754 na latest Contig Major Full 2012-12-07 ASM32368v1 Beijing Genomics Institute GCA_000323685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/685/GCF_000323685.1_ASM32368v1/ na na na haploid bacteria 4348631 4348631 48.000000 0 1104 1104 NCBI RefSeq GCF_000323685.1-RS_2026_03_28 2026-03-28 4260 3862 30 23271803 GCF_000323705.1 PRJNA224116 SAMN02403019 ADPX00000000.1 na 755924 632 Yersinia pestis A1956001 strain=A1956001 na latest Contig Major Full 2012-12-07 ASM32370v1 Beijing Genomics Institute GCA_000323705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/705/GCF_000323705.1_ASM32370v1/ na na na haploid bacteria 4508534 4508534 47.500000 0 852 852 NCBI RefSeq GCF_000323705.1-RS_2026_03_21 2026-03-21 4286 3975 33 23271803 GCF_000323725.1 PRJNA224116 SAMN02403020 ADPY00000000.1 na 755874 632 Yersinia pestis A1973001 strain=A1973001 na latest Contig Major Full 2012-12-07 ASM32372v1 Beijing Genomics Institute GCA_000323725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/725/GCF_000323725.1_ASM32372v1/ na na na haploid bacteria 4413119 4413119 47.500000 0 1539 1539 NCBI RefSeq GCF_000323725.1-RS_2026_03_21 2026-03-21 4737 4215 32 23271803 GCF_000323745.1 PRJNA224116 SAMN02403022 ADPZ00000000.1 na 755915 632 Yersinia pestis C1975003 strain=C1975003 na latest Contig Major Full 2012-12-07 ASM32374v1 Beijing Genomics Institute GCA_000323745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/745/GCF_000323745.1_ASM32374v1/ na na na haploid bacteria 4365481 4365481 48.000000 0 1452 1452 NCBI RefSeq GCF_000323745.1-RS_2026_06_14 2026-06-14 4475 3967 32 23271803 GCF_000323765.1 PRJNA224116 SAMN02403023 ADQA00000000.1 na 755883 632 Yersinia pestis C1976001 strain=C1976001 na latest Contig Major Full 2012-12-07 ASM32376v1 Beijing Genomics Institute GCA_000323765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/765/GCF_000323765.1_ASM32376v1/ na na na haploid bacteria 4546693 4546693 47.500000 0 979 979 NCBI RefSeq GCF_000323765.1-RS_2026_03_03 2026-03-03 4436 4108 26 23271803 GCF_000323785.1 PRJNA224116 SAMN02403024 ADQB00000000.1 na 755891 632 Yersinia pestis C1989001 strain=C1989001 na latest Contig Major Full 2012-12-07 ASM32378v1 Beijing Genomics Institute GCA_000323785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/785/GCF_000323785.1_ASM32378v1/ na na na haploid bacteria 4588735 4588735 47.500000 0 934 934 NCBI RefSeq GCF_000323785.1-RS_2026_03_28 2026-03-28 4439 4107 27 23271803 GCF_000323805.1 PRJNA224116 SAMN02403025 ADQC00000000.1 na 755898 632 Yersinia pestis CMCC02041 strain=CMCC02041 na latest Contig Major Full 2012-12-07 ASM32380v1 Beijing Genomics Institute GCA_000323805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/805/GCF_000323805.1_ASM32380v1/ na na na haploid bacteria 4489186 4489186 47.500000 0 1281 1281 NCBI RefSeq GCF_000323805.1-RS_2026_03_21 2026-03-21 4563 4115 37 23271803 GCF_000323825.1 PRJNA224116 SAMN02403026 ADQD00000000.1 na 755899 632 Yersinia pestis CMCC03001 strain=CMCC03001 na latest Contig Major Full 2012-12-07 ASM32382v1 Beijing Genomics Institute GCA_000323825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/825/GCF_000323825.1_ASM32382v1/ na na na haploid bacteria 4366616 4366616 47.500000 0 1082 1082 NCBI RefSeq GCF_000323825.1-RS_2026_03_21 2026-03-21 4306 3927 31 23271803 GCF_000323845.1 PRJNA224116 SAMN02403027 ADQE00000000.1 na 755900 632 Yersinia pestis CMCC05009 strain=CMCC05009 na latest Contig Major Full 2012-12-07 ASM32384v1 Beijing Genomics Institute GCA_000323845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/845/GCF_000323845.1_ASM32384v1/ na na na haploid bacteria 4501730 4501730 47.500000 0 1501 1501 NCBI RefSeq GCF_000323845.1-RS_2026_03_21 2026-03-21 4638 4151 36 23271803 GCF_000323865.1 PRJNA224116 SAMN02403028 ADQF00000000.1 na 755901 632 Yersinia pestis CMCC05013 strain=CMCC05013 na latest Contig Major Full 2012-12-07 ASM32386v1 Beijing Genomics Institute GCA_000323865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/865/GCF_000323865.1_ASM32386v1/ na na na haploid bacteria 4395097 4395097 48.000000 0 1360 1360 NCBI RefSeq GCF_000323865.1-RS_2026_03_28 2026-03-28 4466 3973 31 23271803 GCF_000323885.1 PRJNA224116 SAMN02403029 ADQG00000000.1 na 755902 632 Yersinia pestis CMCC10012 strain=CMCC10012 na latest Contig Major Full 2012-12-07 ASM32388v1 Beijing Genomics Institute GCA_000323885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/885/GCF_000323885.1_ASM32388v1/ na na na haploid bacteria 4435712 4435712 47.500000 0 1001 1001 NCBI RefSeq GCF_000323885.1-RS_2026_03_28 2026-03-28 4290 3946 31 23271803 GCF_000323905.1 PRJNA224116 SAMN02403030 ADQH00000000.1 na 755903 632 Yersinia pestis CMCC104003 strain=CMCC104003 na latest Contig Major Full 2012-12-07 ASM32390v1 Beijing Genomics Institute GCA_000323905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/905/GCF_000323905.1_ASM32390v1/ na na na haploid bacteria 4494768 4494768 47.500000 0 1387 1387 NCBI RefSeq GCF_000323905.1-RS_2026_03_21 2026-03-21 4621 4123 37 23271803 GCF_000323925.1 PRJNA224116 SAMN02403031 ADQI00000000.1 na 755904 632 Yersinia pestis CMCC106002 strain=CMCC106002 na latest Contig Major Full 2012-12-07 ASM32392v1 Beijing Genomics Institute GCA_000323925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/925/GCF_000323925.1_ASM32392v1/ na na na haploid bacteria 4424589 4424589 48.000000 0 1176 1176 NCBI RefSeq GCF_000323925.1-RS_2026_03_21 2026-03-21 4358 3932 31 23271803 GCF_000323965.1 PRJNA224116 SAMN02403033 ADQK00000000.1 na 755906 632 Yersinia pestis CMCC11001 strain=CMCC11001 na latest Contig Major Full 2012-12-07 ASM32396v1 Beijing Genomics Institute GCA_000323965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/965/GCF_000323965.1_ASM32396v1/ na na na haploid bacteria 4423348 4423348 48.000000 0 1100 1100 NCBI RefSeq GCF_000323965.1-RS_2026_03_28 2026-03-28 4308 3961 32 23271803 GCF_000323985.1 PRJNA224116 SAMN02403034 ADQL00000000.1 na 755908 632 Yersinia pestis CMCC114001 strain=CMCC114001 na latest Contig Major Full 2012-12-07 ASM32398v1 Beijing Genomics Institute GCA_000323985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/323/985/GCF_000323985.1_ASM32398v1/ na na na haploid bacteria 4231517 4231517 48.000000 0 1664 1664 NCBI RefSeq GCF_000323985.1-RS_2026_06_14 2026-06-14 4474 3857 35 23271803 GCF_000324005.1 PRJNA224116 SAMN02403035 ADQM00000000.1 na 755909 632 Yersinia pestis CMCC12003 strain=CMCC12003 na latest Contig Major Full 2012-12-07 ASM32400v1 Beijing Genomics Institute GCA_000324005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/005/GCF_000324005.1_ASM32400v1/ na na na haploid bacteria 4341435 4341435 48.000000 0 1045 1045 NCBI RefSeq GCF_000324005.1-RS_2026_03_21 2026-03-21 4242 3882 33 23271803 GCF_000324025.1 PRJNA224116 SAMN02403036 ADQN00000000.1 na 755913 632 Yersinia pestis CMCC125002 strain=CMCC125002 na latest Contig Major Full 2012-12-07 ASM32402v1 Beijing Genomics Institute GCA_000324025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/025/GCF_000324025.1_ASM32402v1/ na na na haploid bacteria 4518010 4518010 47.500000 0 790 790 NCBI RefSeq GCF_000324025.1-RS_2026_03_21 2026-03-21 4258 3967 30 23271803 GCF_000324045.1 PRJNA224116 SAMN02403037 ADQO00000000.1 na 755917 632 Yersinia pestis CMCC18019 strain=CMCC18019 na latest Contig Major Full 2012-12-07 ASM32404v1 Beijing Genomics Institute GCA_000324045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/045/GCF_000324045.1_ASM32404v1/ na na na haploid bacteria 4495992 4495992 47.500000 0 1478 1478 NCBI RefSeq GCF_000324045.1-RS_2026_03_21 2026-03-21 4744 4162 34 23271803 GCF_000324065.1 PRJNA224116 SAMN02403038 ADQP00000000.1 na 755918 632 Yersinia pestis CMCC21106 strain=CMCC21106 na latest Contig Major Full 2012-12-07 ASM32406v1 Beijing Genomics Institute GCA_000324065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/065/GCF_000324065.1_ASM32406v1/ na na na haploid bacteria 4251990 4251990 48.000000 0 1387 1387 NCBI RefSeq GCF_000324065.1-RS_2026_06_14 2026-06-14 4376 3896 31 23271803 GCF_000324085.1 PRJNA224116 SAMN02403039 ADQQ00000000.1 na 755919 632 Yersinia pestis CMCC27002 strain=CMCC27002 na latest Contig Major Full 2012-12-07 ASM32408v1 Beijing Genomics Institute GCA_000324085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/085/GCF_000324085.1_ASM32408v1/ na na na haploid bacteria 4282597 4282597 48.000000 0 1451 1451 NCBI RefSeq GCF_000324085.1-RS_2026_06_14 2026-06-14 4401 3909 32 23271803 GCF_000324105.1 PRJNA224116 SAMN02403040 ADQR00000000.1 na 755920 632 Yersinia pestis CMCC31004 strain=CMCC31004 na latest Contig Major Full 2012-12-07 ASM32410v1 Beijing Genomics Institute GCA_000324105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/105/GCF_000324105.1_ASM32410v1/ na na na haploid bacteria 4413744 4413744 48.000000 0 1229 1229 NCBI RefSeq GCF_000324105.1-RS_2026_03_21 2026-03-21 4386 3945 31 23271803 GCF_000324125.1 PRJNA224116 SAMN02403041 ADQS00000000.1 na 755921 632 Yersinia pestis CMCC347001 strain=CMCC347001 na latest Contig Major Full 2012-12-07 ASM32412v1 Beijing Genomics Institute GCA_000324125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/125/GCF_000324125.1_ASM32412v1/ na na na haploid bacteria 4514951 4514951 47.500000 0 1207 1207 NCBI RefSeq GCF_000324125.1-RS_2026_03_21 2026-03-21 4557 4095 28 23271803 GCF_000324145.1 PRJNA224116 SAMN02403042 ADQT00000000.1 na 755922 632 Yersinia pestis CMCC348002 strain=CMCC348002 na latest Contig Major Full 2012-12-07 ASM32414v1 Beijing Genomics Institute GCA_000324145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/145/GCF_000324145.1_ASM32414v1/ na na na haploid bacteria 4571405 4571405 47.500000 0 846 846 NCBI RefSeq GCF_000324145.1-RS_2026_03_21 2026-03-21 4378 4049 32 23271803 GCF_000324165.1 PRJNA224116 SAMN02403043 ADQU00000000.1 na 755923 632 Yersinia pestis CMCC38001 strain=CMCC38001 na latest Contig Major Full 2012-12-07 ASM32416v1 Beijing Genomics Institute GCA_000324165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/165/GCF_000324165.1_ASM32416v1/ na na na haploid bacteria 4483258 4483258 47.500000 0 1030 1030 NCBI RefSeq GCF_000324165.1-RS_2026_03_28 2026-03-28 4414 4056 33 23271803 GCF_000324185.1 PRJNA224116 SAMN02403044 ADQV00000000.1 na 755925 632 Yersinia pestis CMCC42007 strain=CMCC42007 na latest Contig Major Full 2012-12-07 ASM32418v1 Beijing Genomics Institute GCA_000324185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/185/GCF_000324185.1_ASM32418v1/ na na na haploid bacteria 4440824 4440824 48.000000 0 1040 1040 NCBI RefSeq GCF_000324185.1-RS_2026_03_28 2026-03-28 4294 3945 31 23271803 GCF_000324205.1 PRJNA224116 SAMN02403045 ADQW00000000.1 na 755926 632 Yersinia pestis CMCC43032 strain=CMCC43032 na latest Contig Major Full 2012-12-07 ASM32420v1 Beijing Genomics Institute GCA_000324205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/205/GCF_000324205.1_ASM32420v1/ na na na haploid bacteria 4512744 4512744 47.500000 0 1049 1049 NCBI RefSeq GCF_000324205.1-RS_2026_03_21 2026-03-21 4432 4053 28 23271803 GCF_000324225.1 PRJNA224116 SAMN02403046 ADQX00000000.1 na 755929 632 Yersinia pestis CMCC49003 strain=CMCC49003 na latest Contig Major Full 2012-12-07 ASM32422v1 Beijing Genomics Institute GCA_000324225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/225/GCF_000324225.1_ASM32422v1/ na na na haploid bacteria 4534555 4534555 47.500000 0 795 795 NCBI RefSeq GCF_000324225.1-RS_2026_03_21 2026-03-21 4286 3985 32 23271803 GCF_000324245.1 PRJNA224116 SAMN02403047 ADQY00000000.1 na 755930 632 Yersinia pestis CMCC51020 strain=CMCC51020 na latest Contig Major Full 2012-12-07 ASM32424v1 Beijing Genomics Institute GCA_000324245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/245/GCF_000324245.1_ASM32424v1/ na na na haploid bacteria 4420992 4420992 48.000000 0 1118 1118 NCBI RefSeq GCF_000324245.1-RS_2026_03_21 2026-03-21 4298 3917 33 23271803 GCF_000324265.1 PRJNA224116 SAMN02403048 ADQZ00000000.1 na 755932 632 Yersinia pestis CMCC64001 strain=CMCC64001 na latest Contig Major Full 2012-12-07 ASM32426v1 Beijing Genomics Institute GCA_000324265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/265/GCF_000324265.1_ASM32426v1/ na na na haploid bacteria 4360492 4360492 47.500000 0 955 955 NCBI RefSeq GCF_000324265.1-RS_2026_03_28 2026-03-28 4204 3878 34 23271803 GCF_000324285.1 PRJNA224116 SAMN02403049 ADRA00000000.1 na 755933 632 Yersinia pestis CMCC640047 strain=CMCC640047 na latest Contig Major Full 2012-12-07 ASM32428v1 Beijing Genomics Institute GCA_000324285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/285/GCF_000324285.1_ASM32428v1/ na na na haploid bacteria 4305752 4305752 48.000000 0 1490 1490 NCBI RefSeq GCF_000324285.1-RS_2026_06_14 2026-06-14 4417 3920 32 23271803 GCF_000324305.1 PRJNA224116 SAMN02403050 ADRB00000000.1 na 755934 632 Yersinia pestis CMCC67001 strain=CMCC67001 na latest Contig Major Full 2012-12-07 ASM32430v1 Beijing Genomics Institute GCA_000324305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/305/GCF_000324305.1_ASM32430v1/ na na na haploid bacteria 4340671 4340671 48.000000 0 1099 1099 NCBI RefSeq GCF_000324305.1-RS_2026_03_21 2026-03-21 4258 3873 30 23271803 GCF_000324325.1 PRJNA224116 SAMN02403051 ADRC00000000.1 na 755935 632 Yersinia pestis CMCC71001 strain=CMCC71001 na latest Contig Major Full 2012-12-07 ASM32432v1 Beijing Genomics Institute GCA_000324325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/325/GCF_000324325.1_ASM32432v1/ na na na haploid bacteria 4254189 4254189 48.000000 0 1744 1744 NCBI RefSeq GCF_000324325.1-RS_2026_03_21 2026-03-21 4534 3929 33 23271803 GCF_000324345.1 PRJNA224116 SAMN02403052 ADRD00000000.1 na 755938 632 Yersinia pestis CMCC8211 strain=CMCC8211 na latest Contig Major Full 2012-12-07 ASM32434v1 Beijing Genomics Institute GCA_000324345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/345/GCF_000324345.1_ASM32434v1/ na na na haploid bacteria 4417626 4417626 47.500000 0 797 797 NCBI RefSeq GCF_000324345.1-RS_2026_03_21 2026-03-21 4158 3873 31 23271803 GCF_000324365.1 PRJNA224116 SAMN02403053 ADRE00000000.1 na 755940 632 Yersinia pestis CMCC84033 strain=CMCC84033 na latest Contig Major Full 2012-12-07 ASM32436v1 Beijing Genomics Institute GCA_000324365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/365/GCF_000324365.1_ASM32436v1/ na na na haploid bacteria 4459052 4459052 47.500000 0 1055 1055 NCBI RefSeq GCF_000324365.1-RS_2026_03_28 2026-03-28 4362 3996 28 23271803 GCF_000324405.1 PRJNA224116 SAMN02403055 ADRG00000000.1 na 755942 632 Yersinia pestis CMCC84046 strain=CMCC84046 na latest Contig Major Full 2012-12-07 ASM32440v1 Beijing Genomics Institute GCA_000324405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/405/GCF_000324405.1_ASM32440v1/ na na na haploid bacteria 4517175 4517175 47.500000 0 1137 1137 NCBI RefSeq GCF_000324405.1-RS_2026_03_28 2026-03-28 4543 4187 25 23271803 GCF_000324425.1 PRJNA224116 SAMN02403056 ADRH00000000.1 na 755943 632 Yersinia pestis CMCC87001 strain=CMCC87001 na latest Contig Major Full 2012-12-07 ASM32442v1 Beijing Genomics Institute GCA_000324425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/425/GCF_000324425.1_ASM32442v1/ na na na haploid bacteria 4510364 4510364 47.500000 0 870 870 NCBI RefSeq GCF_000324425.1-RS_2026_03_21 2026-03-21 4297 3979 34 23271803 GCF_000324445.1 PRJNA224116 SAMN02403057 ADRI00000000.1 na 755944 632 Yersinia pestis CMCC90027 strain=CMCC90027 na latest Contig Major Full 2012-12-07 ASM32444v1 Beijing Genomics Institute GCA_000324445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/445/GCF_000324445.1_ASM32444v1/ na na na haploid bacteria 4358986 4358986 48.000000 0 1102 1102 NCBI RefSeq GCF_000324445.1-RS_2026_03_21 2026-03-21 4321 3929 32 23271803 GCF_000324465.1 PRJNA224116 SAMN02403058 ADRJ00000000.1 na 755945 632 Yersinia pestis CMCC91090 strain=CMCC91090 na latest Contig Major Full 2012-12-07 ASM32446v1 Beijing Genomics Institute GCA_000324465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/465/GCF_000324465.1_ASM32446v1/ na na na haploid bacteria 4418766 4418766 47.500000 0 987 987 NCBI RefSeq GCF_000324465.1-RS_2026_03_28 2026-03-28 4307 3934 33 23271803 GCF_000324485.1 PRJNA224116 SAMN02403059 ADRK00000000.1 na 755946 632 Yersinia pestis CMCC92004 strain=CMCC92004 na latest Contig Major Full 2012-12-07 ASM32448v1 Beijing Genomics Institute GCA_000324485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/485/GCF_000324485.1_ASM32448v1/ na na na haploid bacteria 4264825 4264825 48.000000 0 1461 1461 NCBI RefSeq GCF_000324485.1-RS_2026_03_28 2026-03-28 4393 3888 31 23271803 GCF_000324505.1 PRJNA224116 SAMN02403060 ADRL00000000.1 na 755947 632 Yersinia pestis CMCC92010 strain=CMCC92010 na latest Contig Major Full 2012-12-07 ASM32450v1 Beijing Genomics Institute GCA_000324505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/505/GCF_000324505.1_ASM32450v1/ na na na haploid bacteria 4384955 4384955 47.500000 0 1216 1216 NCBI RefSeq GCF_000324505.1-RS_2026_03_28 2026-03-28 4410 4012 35 23271803 GCF_000324525.1 PRJNA224116 SAMN02403061 ADRM00000000.1 na 755948 632 Yersinia pestis CMCC93014 strain=CMCC93014 na latest Contig Major Full 2012-12-07 ASM32452v1 Beijing Genomics Institute GCA_000324525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/525/GCF_000324525.1_ASM32452v1/ na na na haploid bacteria 4507171 4507171 47.500000 0 993 993 NCBI RefSeq GCF_000324525.1-RS_2026_03_21 2026-03-21 4397 4041 26 23271803 GCF_000324545.1 PRJNA224116 SAMN02403062 ADRN00000000.1 na 755949 632 Yersinia pestis CMCC95001 strain=CMCC95001 na latest Contig Major Full 2012-12-07 ASM32454v1 Beijing Genomics Institute GCA_000324545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/545/GCF_000324545.1_ASM32454v1/ na na na haploid bacteria 4337306 4337306 48.000000 0 1361 1361 NCBI RefSeq GCF_000324545.1-RS_2026_03_21 2026-03-21 4385 3878 33 23271803 GCF_000324565.1 PRJNA224116 SAMN02403063 ADRO00000000.1 na 755950 632 Yersinia pestis CMCC96001 strain=CMCC96001 na latest Contig Major Full 2012-12-07 ASM32456v1 Beijing Genomics Institute GCA_000324565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/565/GCF_000324565.1_ASM32456v1/ na na na haploid bacteria 4517589 4517589 47.500000 0 907 907 NCBI RefSeq GCF_000324565.1-RS_2026_03_28 2026-03-28 4320 3977 32 23271803 GCF_000324585.1 PRJNA224116 SAMN02403064 ADRP00000000.1 na 755951 632 Yersinia pestis CMCC96007 strain=CMCC96007 na latest Contig Major Full 2012-12-07 ASM32458v1 Beijing Genomics Institute GCA_000324585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/585/GCF_000324585.1_ASM32458v1/ na na na haploid bacteria 4303407 4303407 48.000000 0 1563 1563 NCBI RefSeq GCF_000324585.1-RS_2026_06_12 2026-06-12 4487 4012 38 23271803 GCF_000324605.1 PRJNA224116 SAMN02403065 ADRQ00000000.1 na 755953 632 Yersinia pestis CMCC99103 strain=CMCC99103 na latest Contig Major Full 2012-12-07 ASM32460v1 Beijing Genomics Institute GCA_000324605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/605/GCF_000324605.1_ASM32460v1/ na na na haploid bacteria 4409843 4409843 48.000000 0 1262 1262 NCBI RefSeq GCF_000324605.1-RS_2026_03_28 2026-03-28 4375 3982 34 23271803 GCF_000324625.1 PRJNA224116 SAMN02403066 ADRR00000000.1 na 755954 632 Yersinia pestis CMCCK100001 strain=CMCCK100001 na latest Contig Major Full 2012-12-07 ASM32462v1 Beijing Genomics Institute GCA_000324625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/625/GCF_000324625.1_ASM32462v1/ na na na haploid bacteria 4520971 4520971 47.500000 0 1406 1406 NCBI RefSeq GCF_000324625.1-RS_2026_03_21 2026-03-21 4748 4267 25 23271803 GCF_000324645.1 PRJNA224116 SAMN02403067 ADRS00000000.1 na 755955 632 Yersinia pestis CMCCK110001 strain=CMCCK110001 na latest Contig Major Full 2012-12-07 ASM32464v1 Beijing Genomics Institute GCA_000324645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/645/GCF_000324645.1_ASM32464v1/ na na na haploid bacteria 4305250 4305250 48.000000 0 1385 1385 NCBI RefSeq GCF_000324645.1-RS_2026_03_21 2026-03-21 4375 3868 32 23271803 GCF_000324665.1 PRJNA224116 SAMN02403068 ADRT00000000.1 na 755956 632 Yersinia pestis CMCCN010025 strain=CMCCN010025 na latest Contig Major Full 2012-12-07 ASM32466v1 Beijing Genomics Institute GCA_000324665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/665/GCF_000324665.1_ASM32466v1/ na na na haploid bacteria 4437913 4437913 48.000000 0 1016 1016 NCBI RefSeq GCF_000324665.1-RS_2026_03_28 2026-03-28 4305 3931 33 23271803 GCF_000324685.1 PRJNA224116 SAMN02403069 ADRU00000000.1 na 755882 632 Yersinia pestis D1964001 strain=D1964001 na latest Contig Major Full 2012-12-07 ASM32468v1 Beijing Genomics Institute GCA_000324685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/685/GCF_000324685.1_ASM32468v1/ na na na haploid bacteria 4389464 4389464 47.500000 0 1012 1012 NCBI RefSeq GCF_000324685.1-RS_2026_03_28 2026-03-28 4317 3962 35 23271803 GCF_000324705.1 PRJNA224116 SAMN02403070 ADRV00000000.1 na 755911 632 Yersinia pestis D1964002 strain=D1964002 na latest Contig Major Full 2012-12-07 ASM32470v1 Beijing Genomics Institute GCA_000324705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/705/GCF_000324705.1_ASM32470v1/ na na na haploid bacteria 4431847 4431847 47.500000 0 1555 1555 NCBI RefSeq GCF_000324705.1-RS_2026_03_28 2026-03-28 4705 4187 29 23271803 GCF_000324725.1 PRJNA224116 SAMN02403071 ADRW00000000.1 na 755887 632 Yersinia pestis D1982001 strain=D1982001 na latest Contig Major Full 2012-12-07 ASM32472v1 Beijing Genomics Institute GCA_000324725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/725/GCF_000324725.1_ASM32472v1/ na na na haploid bacteria 4410882 4410882 47.500000 0 896 896 NCBI RefSeq GCF_000324725.1-RS_2026_03_21 2026-03-21 4287 3992 26 23271803 GCF_000324745.1 PRJNA224116 SAMN02403072 ADRX00000000.1 na 755892 632 Yersinia pestis D1991004 strain=D1991004 na latest Contig Major Full 2012-12-07 ASM32474v1 Beijing Genomics Institute GCA_000324745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/745/GCF_000324745.1_ASM32474v1/ na na na haploid bacteria 4506081 4506081 47.500000 0 1270 1270 NCBI RefSeq GCF_000324745.1-RS_2026_03_21 2026-03-21 4640 4202 32 23271803 GCF_000324765.1 PRJNA224116 SAMN02403073 ADRY00000000.1 na 755939 632 Yersinia pestis E1977001 strain=E1977001 na latest Contig Major Full 2012-12-07 ASM32476v1 Beijing Genomics Institute GCA_000324765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/765/GCF_000324765.1_ASM32476v1/ na na na haploid bacteria 4385578 4385578 48.000000 0 1183 1183 NCBI RefSeq GCF_000324765.1-RS_2026_03_28 2026-03-28 4314 3934 33 23271803 GCF_000324785.1 PRJNA224116 SAMN02403021 ADRZ00000000.1 na 360099 632 Yersinia pestis biovar Antiqua str. E1979001 strain=E1979001 na latest Contig Major Full 2012-12-07 ASM32478v1 Beijing Genomics Institute GCA_000324785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/785/GCF_000324785.1_ASM32478v1/ na na na haploid bacteria 4516254 4516254 47.500000 0 941 941 NCBI RefSeq GCF_000324785.1-RS_2026_03_21 2026-03-21 4369 4026 32 na GCF_000324805.2 PRJNA224116 SAMN02403074 ADSA00000000.2 na 665028 632 Yersinia pestis EV76-CN strain=EV76-CN na latest Scaffold Major Full 2013-11-26 EV76-CN Beijing Genomics Institute GCA_000324805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/805/GCF_000324805.2_EV76-CN/ na na na haploid bacteria 4336975 4336975 48.000000 3 474 474 NCBI RefSeq GCF_000324805.2-RS_2026_06_11 2026-06-11 4106 3789 64 23271803 GCF_000324825.1 PRJNA224116 SAMN02403075 ADSB00000000.1 na 755907 632 Yersinia pestis F1946001 strain=F1946001 na latest Contig Major Full 2012-12-07 ASM32482v1 Beijing Genomics Institute GCA_000324825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/825/GCF_000324825.1_ASM32482v1/ na na na haploid bacteria 4463713 4463713 47.500000 0 1383 1383 NCBI RefSeq GCF_000324825.1-RS_2026_03_21 2026-03-21 4645 4116 34 23271803 GCF_000324845.1 PRJNA224116 SAMN02403076 ADSC00000000.1 na 755890 632 Yersinia pestis F1954001 strain=F1954001 na latest Contig Major Full 2012-12-07 ASM32484v1 Beijing Genomics Institute GCA_000324845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/845/GCF_000324845.1_ASM32484v1/ na na na haploid bacteria 4521000 4521000 47.500000 0 1058 1058 NCBI RefSeq GCF_000324845.1-RS_2026_03_21 2026-03-21 4460 4094 26 23271803 GCF_000324865.1 PRJNA224116 SAMN02403077 ADSD00000000.1 na 755937 632 Yersinia pestis F1984001 strain=F1984001 na latest Contig Major Full 2012-12-07 ASM32486v1 Beijing Genomics Institute GCA_000324865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/865/GCF_000324865.1_ASM32486v1/ na na na haploid bacteria 4326553 4326553 48.000000 0 1467 1467 NCBI RefSeq GCF_000324865.1-RS_2026_06_14 2026-06-14 4442 3924 36 23271803 GCF_000324885.1 PRJNA224116 SAMN02403078 ADSE00000000.1 na 755873 632 Yersinia pestis G1996006 strain=G1996006 na latest Contig Major Full 2012-12-07 ASM32488v1 Beijing Genomics Institute GCA_000324885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/885/GCF_000324885.1_ASM32488v1/ na na na haploid bacteria 4542684 4542684 47.500000 0 842 842 NCBI RefSeq GCF_000324885.1-RS_2026_03_28 2026-03-28 4290 3989 32 23271803 GCF_000324905.1 PRJNA224116 SAMN02403079 ADSF00000000.1 na 755872 632 Yersinia pestis G1996010 strain=G1996010 na latest Contig Major Full 2012-12-07 ASM32490v1 Beijing Genomics Institute GCA_000324905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/905/GCF_000324905.1_ASM32490v1/ na na na haploid bacteria 4552418 4552418 47.500000 0 772 772 NCBI RefSeq GCF_000324905.1-RS_2026_03_28 2026-03-28 4287 3999 32 23271803 GCF_000324925.1 PRJNA224116 SAMN02403080 ADSG00000000.1 na 755957 632 Yersinia pestis G8786 strain=G8786 na latest Contig Major Full 2012-12-07 ASM32492v1 Beijing Genomics Institute GCA_000324925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/925/GCF_000324925.1_ASM32492v1/ na na na haploid bacteria 4325798 4325798 48.000000 0 829 829 NCBI RefSeq GCF_000324925.1-RS_2026_03_21 2026-03-21 4115 3803 31 23271803 GCF_000324945.1 PRJNA224116 SAMN02403081 ADSH00000000.1 na 755931 632 Yersinia pestis H1958004 strain=H1958004 na latest Contig Major Full 2012-12-07 ASM32494v1 Beijing Genomics Institute GCA_000324945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/945/GCF_000324945.1_ASM32494v1/ na na na haploid bacteria 4195425 4195425 48.000000 0 1339 1339 NCBI RefSeq GCF_000324945.1-RS_2026_03_21 2026-03-21 4236 3799 32 23271803 GCF_000324965.1 PRJNA224116 SAMN02403082 ADSI00000000.1 na 755879 632 Yersinia pestis H1959004 strain=H1959004 na latest Contig Major Full 2012-12-07 ASM32496v1 Beijing Genomics Institute GCA_000324965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/965/GCF_000324965.1_ASM32496v1/ na na na haploid bacteria 4470270 4470270 47.500000 0 946 946 NCBI RefSeq GCF_000324965.1-RS_2026_03_28 2026-03-28 4284 3959 33 23271803 GCF_000324985.1 PRJNA224116 SAMN02403083 ADSJ00000000.1 na 755958 632 Yersinia pestis I160001 strain=I160001 na latest Contig Major Full 2012-12-07 ASM32498v1 Beijing Genomics Institute GCA_000324985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/324/985/GCF_000324985.1_ASM32498v1/ na na na haploid bacteria 4399336 4399336 47.500000 0 1222 1222 NCBI RefSeq GCF_000324985.1-RS_2026_03_28 2026-03-28 4451 4043 33 23271803 GCF_000325005.1 PRJNA224116 SAMN02403084 ADSK00000000.1 na 755914 632 Yersinia pestis I1969003 strain=I1969003 na latest Contig Major Full 2012-12-07 ASM32500v1 Beijing Genomics Institute GCA_000325005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/005/GCF_000325005.1_ASM32500v1/ na na na haploid bacteria 4512122 4512122 47.500000 0 1213 1213 NCBI RefSeq GCF_000325005.1-RS_2026_03_28 2026-03-28 4548 4123 36 23271803 GCF_000325025.1 PRJNA224116 SAMN02403085 ADSL00000000.1 na 755952 632 Yersinia pestis I1970005 strain=I1970005 na latest Contig Major Full 2012-12-07 ASM32502v1 Beijing Genomics Institute GCA_000325025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/025/GCF_000325025.1_ASM32502v1/ na na na haploid bacteria 4429836 4429836 48.000000 0 1199 1199 NCBI RefSeq GCF_000325025.1-RS_2026_03_21 2026-03-21 4349 3966 32 23271803 GCF_000325045.1 PRJNA224116 SAMN02403086 ADSM00000000.1 na 755858 632 Yersinia pestis I1991001 strain=I1991001 na latest Contig Major Full 2012-12-07 ASM32504v1 Beijing Genomics Institute GCA_000325045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/045/GCF_000325045.1_ASM32504v1/ na na na haploid bacteria 4335804 4335804 48.000000 0 1191 1191 NCBI RefSeq GCF_000325045.1-RS_2026_03_21 2026-03-21 4284 3851 33 23271803 GCF_000325065.1 PRJNA224116 SAMN02403087 ADSN00000000.1 na 755910 632 Yersinia pestis I1994006 strain=I1994006 na latest Contig Major Full 2012-12-07 ASM32506v1 Beijing Genomics Institute GCA_000325065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/065/GCF_000325065.1_ASM32506v1/ na na na haploid bacteria 4498336 4498336 47.500000 0 1247 1247 NCBI RefSeq GCF_000325065.1-RS_2026_03_21 2026-03-21 4547 4112 35 23271803 GCF_000325085.1 PRJNA224116 SAMN02403088 ADSO00000000.1 na 755916 632 Yersinia pestis I2001001 strain=I2001001 na latest Contig Major Full 2012-12-07 ASM32508v1 Beijing Genomics Institute GCA_000325085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/085/GCF_000325085.1_ASM32508v1/ na na na haploid bacteria 4509469 4509469 47.500000 0 1526 1526 NCBI RefSeq GCF_000325085.1-RS_2026_03_28 2026-03-28 4838 4339 23 23271803 GCF_000325105.1 PRJNA224116 SAMN02403089 ADSP00000000.1 na 755936 632 Yersinia pestis J1963002 strain=J1963002 na latest Contig Major Full 2012-12-07 ASM32510v1 Beijing Genomics Institute GCA_000325105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/105/GCF_000325105.1_ASM32510v1/ na na na haploid bacteria 4434765 4434765 48.000000 0 1119 1119 NCBI RefSeq GCF_000325105.1-RS_2026_03_28 2026-03-28 4337 3953 33 23271803 GCF_000325125.1 PRJNA224116 SAMN02403090 ADSQ00000000.1 na 755912 632 Yersinia pestis J1978002 strain=J1978002 na latest Contig Major Full 2012-12-07 ASM32512v1 Beijing Genomics Institute GCA_000325125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/125/GCF_000325125.1_ASM32512v1/ na na na haploid bacteria 4532297 4532297 47.500000 0 1098 1098 NCBI RefSeq GCF_000325125.1-RS_2026_03_21 2026-03-21 4486 4137 23 23271803 GCF_000325145.1 PRJNA224116 SAMN02403091 ADSR00000000.1 na 755928 632 Yersinia pestis K11973002 strain=K11973002 na latest Contig Major Full 2012-12-07 ASM32514v1 Beijing Genomics Institute GCA_000325145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/145/GCF_000325145.1_ASM32514v1/ na na na haploid bacteria 4383307 4383307 47.500000 0 910 910 NCBI RefSeq GCF_000325145.1-RS_2026_03_21 2026-03-21 4209 3882 31 na GCF_000325165.1 PRJNA224116 SAMN02403092 ADSS00000000.1 na 755927 632 Yersinia pestis K21985002 strain=K21985002 na latest Contig Major Full 2012-12-07 ASM32516v1 Beijing Genomics Institute GCA_000325165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/165/GCF_000325165.1_ASM32516v1/ na na na haploid bacteria 4399142 4399142 47.500000 0 1264 1264 NCBI RefSeq GCF_000325165.1-RS_2026_03_21 2026-03-21 4459 4062 32 23271803 GCF_000325185.1 PRJNA224116 SAMN02403093 ADST00000000.1 na 755897 632 Yersinia pestis M0000002 strain=M0000002 na latest Contig Major Full 2012-12-07 ASM32518v1 Beijing Genomics Institute GCA_000325185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/185/GCF_000325185.1_ASM32518v1/ na na na haploid bacteria 4441674 4441674 48.000000 0 1135 1135 NCBI RefSeq GCF_000325185.1-RS_2026_03_28 2026-03-28 4327 3944 32 23271803 GCF_000325205.1 PRJNA224116 SAMN02403094 ADSU00000000.1 na 755959 632 Yersinia pestis MGJZ11 strain=MGJZ11 na latest Contig Major Full 2012-12-07 ASM32520v1 Beijing Genomics Institute GCA_000325205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/205/GCF_000325205.1_ASM32520v1/ na na na haploid bacteria 4516720 4516720 47.500000 0 859 859 NCBI RefSeq GCF_000325205.1-RS_2026_03_28 2026-03-28 4308 3994 35 23271803 GCF_000325225.1 PRJNA224116 SAMN02403095 ADSV00000000.1 na 755960 632 Yersinia pestis MGJZ12 strain=MGJZ12 na latest Contig Major Full 2012-12-07 ASM32522v1 Beijing Genomics Institute GCA_000325225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/225/GCF_000325225.1_ASM32522v1/ na na na haploid bacteria 4438965 4438965 48.000000 0 1203 1203 NCBI RefSeq GCF_000325225.1-RS_2026_03_21 2026-03-21 4446 4043 36 23271803 GCF_000325245.1 PRJNA224116 SAMN02403096 ADSW00000000.1 na 755961 632 Yersinia pestis MGJZ3 strain=MGJZ3 na latest Contig Major Full 2012-12-07 ASM32524v1 Beijing Genomics Institute GCA_000325245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/245/GCF_000325245.1_ASM32524v1/ na na na haploid bacteria 4453871 4453871 47.500000 0 1187 1187 NCBI RefSeq GCF_000325245.1-RS_2026_03_21 2026-03-21 4528 4135 24 23271803 GCF_000325265.1 PRJNA224116 SAMN02403097 ADSX00000000.1 na 755962 632 Yersinia pestis MGJZ6 strain=MGJZ6 na latest Contig Major Full 2012-12-07 ASM32526v1 Beijing Genomics Institute GCA_000325265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/265/GCF_000325265.1_ASM32526v1/ na na na haploid bacteria 4368072 4368072 48.000000 0 1016 1016 NCBI RefSeq GCF_000325265.1-RS_2026_03_21 2026-03-21 4259 3925 38 23271803 GCF_000325285.1 PRJNA224116 SAMN02403098 ADSY00000000.1 na 755963 632 Yersinia pestis MGJZ7 strain=MGJZ7 na latest Contig Major Full 2012-12-07 ASM32528v1 Beijing Genomics Institute GCA_000325285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/285/GCF_000325285.1_ASM32528v1/ na na na haploid bacteria 4365909 4365909 48.000000 0 1325 1325 NCBI RefSeq GCF_000325285.1-RS_2026_03_28 2026-03-28 4415 4004 36 23271803 GCF_000325305.1 PRJNA224116 SAMN02403099 ADSZ00000000.1 na 755964 632 Yersinia pestis MGJZ9 strain=MGJZ9 na latest Contig Major Full 2012-12-07 ASM32530v1 Beijing Genomics Institute GCA_000325305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/305/GCF_000325305.1_ASM32530v1/ na na na haploid bacteria 4474930 4474930 48.000000 0 1082 1082 NCBI RefSeq GCF_000325305.1-RS_2026_03_28 2026-03-28 4389 4034 33 23271803 GCF_000325325.1 PRJNA224116 SAMN02403100 ADTA00000000.1 na 755965 632 Yersinia pestis SHAN11 strain=SHAN11 na latest Contig Major Full 2012-12-07 ASM32532v1 Beijing Genomics Institute GCA_000325325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/325/GCF_000325325.1_ASM32532v1/ na na na haploid bacteria 4384465 4384465 48.000000 0 1173 1173 NCBI RefSeq GCF_000325325.1-RS_2026_03_21 2026-03-21 4296 3907 33 23271803 GCF_000325345.1 PRJNA224116 SAMN02403101 ADTB00000000.1 na 755966 632 Yersinia pestis SHAN12 strain=SHAN12 na latest Contig Major Full 2012-12-07 ASM32534v1 Beijing Genomics Institute GCA_000325345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/345/GCF_000325345.1_ASM32534v1/ na na na haploid bacteria 4371391 4371391 48.000000 0 1362 1362 NCBI RefSeq GCF_000325345.1-RS_2026_03_21 2026-03-21 4419 3958 32 23271803 GCF_000325365.1 PRJNA224116 SAMN02403102 ADTC00000000.1 na 755967 632 Yersinia pestis YN1065 strain=YN1065 na latest Contig Major Full 2012-12-07 ASM32536v1 Beijing Genomics Institute GCA_000325365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/365/GCF_000325365.1_ASM32536v1/ na na na haploid bacteria 4472301 4472301 47.500000 0 1395 1395 NCBI RefSeq GCF_000325365.1-RS_2026_03_21 2026-03-21 4606 4093 33 23271803 GCF_000325385.1 PRJNA224116 SAMN02403103 ADTD00000000.1 na 755968 632 Yersinia pestis YN1683 strain=YN1683 na latest Contig Major Full 2012-12-07 ASM32538v1 Beijing Genomics Institute GCA_000325385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/385/GCF_000325385.1_ASM32538v1/ na na na haploid bacteria 4302115 4302115 48.000000 0 1897 1897 NCBI RefSeq GCF_000325385.1-RS_2026_06_14 2026-06-14 4767 4117 31 23271803 GCF_000325405.1 PRJNA224116 SAMN02403104 ADTE00000000.1 na 755969 632 Yersinia pestis YN2179 strain=YN2179 na latest Contig Major Full 2012-12-07 ASM32540v1 Beijing Genomics Institute GCA_000325405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/405/GCF_000325405.1_ASM32540v1/ na na na haploid bacteria 4307368 4307368 48.000000 0 1605 1605 NCBI RefSeq GCF_000325405.1-RS_2026_06_14 2026-06-14 4505 3948 33 23271803 GCF_000325425.1 PRJNA224116 SAMN02403105 ADTF00000000.1 na 755970 632 Yersinia pestis YN2551 strain=YN2551 na latest Contig Major Full 2012-12-07 ASM32542v1 Beijing Genomics Institute GCA_000325425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/425/GCF_000325425.1_ASM32542v1/ na na na haploid bacteria 4524315 4524315 47.500000 0 880 880 NCBI RefSeq GCF_000325425.1-RS_2026_03_21 2026-03-21 4323 3983 32 23271803 GCF_000325445.1 PRJNA224116 SAMN02403106 ADTG00000000.1 na 755971 632 Yersinia pestis YN2588 strain=YN2588 na latest Contig Major Full 2012-12-07 ASM32544v1 Beijing Genomics Institute GCA_000325445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/445/GCF_000325445.1_ASM32544v1/ na na na haploid bacteria 4307940 4307940 48.000000 0 1301 1301 NCBI RefSeq GCF_000325445.1-RS_2026_03_21 2026-03-21 4346 3862 35 23271803 GCF_000325465.1 PRJNA224116 SAMN02403107 ADTH00000000.1 na 755972 632 Yersinia pestis YN472 strain=YN472 na latest Contig Major Full 2012-12-07 ASM32546v1 Beijing Genomics Institute GCA_000325465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/465/GCF_000325465.1_ASM32546v1/ na na na haploid bacteria 4525667 4525667 47.500000 0 1105 1105 NCBI RefSeq GCF_000325465.1-RS_2026_03_21 2026-03-21 4498 4156 23 23271803 GCF_000325485.1 PRJNA224116 SAMN02403108 ADTI00000000.1 na 755973 632 Yersinia pestis YN663 strain=YN663 na latest Contig Major Full 2012-12-07 ASM32548v1 Beijing Genomics Institute GCA_000325485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/485/GCF_000325485.1_ASM32548v1/ na na na haploid bacteria 4203251 4203251 48.000000 0 1285 1285 NCBI RefSeq GCF_000325485.1-RS_2026_06_14 2026-06-14 4277 3804 35 23271803 GCF_000325665.1 PRJNA224116 SAMN02603038 na na 1042417 52584 Brachyspira pilosicoli P43/6/78 strain=P43/6/78 na latest Complete Genome Major Full 2012-12-19 ASM32566v1 Biomedical Science, Cornell University GCA_000325665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/665/GCF_000325665.1_ASM32566v1/ na assembly from type material na haploid bacteria 2555556 2555556 28.000000 1 1 1 NCBI RefSeq GCF_000325665.1-RS_2025_07_06 2025-07-06 2365 2232 40 23469345 GCF_000325705.1 PRJNA224116 SAMN02232018 na reference genome 926556 390884 Echinicola vietnamensis DSM 17526 strain=DSM 17526 na latest Complete Genome Major Full 2012-12-19 ASM32570v1 DOE Joint Genome Institute GCA_000325705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/705/GCF_000325705.1_ASM32570v1/ na assembly from type material na haploid bacteria 5608040 5608040 45.000000 1 1 1 NCBI RefSeq GCF_000325705.1-RS_2026_05_02 2026-05-02 4515 4430 60 na GCF_000325725.1 PRJNA224116 SAMN02604102 na na 1215088 303 Pseudomonas putida HB3267 strain=PC9 na latest Complete Genome Major Full 2012-12-19 ASM32572v1 Universidad de Huelva GCA_000325725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/725/GCF_000325725.1_ASM32572v1/ na na na haploid bacteria 5956110 5956110 62.500000 2 2 2 NCBI RefSeq GCF_000325725.1-RS_2025_05_22 2025-05-22 5559 5356 96 24465371 GCF_000325745.1 PRJNA224116 SAMN02604174 na na 1215343 1273132 Liberibacter crescens BT-1 strain=BT-1 na latest Complete Genome Major Full 2012-12-19 ASM32574v1 University of Florida GCA_000325745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/325/745/GCF_000325745.1_ASM32574v1/ na assembly from type material na haploid bacteria 1504659 1504659 35.500000 1 1 1 NCBI RefSeq GCF_000325745.1-RS_2026_04_24 2026-04-24 1390 1269 59 23408754 GCF_000326145.1 PRJNA224116 SAMN00847691 ANXM00000000.1 na 1169373 562 Escherichia coli KTE105 strain=KTE105 na latest Contig Major Full 2012-12-19 Esch_coli_KTE105_V1 Broad Institute GCA_000326145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/145/GCF_000326145.1_Esch_coli_KTE105_V1/ na na na haploid bacteria 4967959 4967959 50.500000 0 99 99 NCBI RefSeq GCF_000326145.1-RS_2025_07_09 2025-07-09 4858 4617 82 na GCF_000326165.1 PRJNA224116 SAMN00847692 ANXN00000000.1 na 1169374 562 Escherichia coli KTE106 strain=KTE106 na latest Contig Major Full 2012-12-19 Esch_coli_KTE106_V1 Broad Institute GCA_000326165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/165/GCF_000326165.1_Esch_coli_KTE106_V1/ na na na haploid bacteria 5219985 5219985 50.500000 0 132 132 NCBI RefSeq GCF_000326165.1-RS_2025_07_09 2025-07-09 5177 4838 84 na GCF_000326185.1 PRJNA224116 SAMN00847693 ANXO00000000.1 na 1169375 562 Escherichia coli KTE109 strain=KTE109 na latest Contig Major Full 2012-12-19 Esch_coli_KTE109_V1 Broad Institute GCA_000326185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/185/GCF_000326185.1_Esch_coli_KTE109_V1/ na na na haploid bacteria 4722775 4722775 50.500000 0 52 52 NCBI RefSeq GCF_000326185.1-RS_2025_06_13 2025-06-13 4596 4379 87 na GCF_000326205.1 PRJNA224116 SAMN00847696 ANXR00000000.1 na 1169378 562 Escherichia coli KTE117 strain=KTE117 na latest Contig Major Full 2012-12-19 Esch_coli_KTE117_V1 Broad Institute GCA_000326205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/205/GCF_000326205.1_Esch_coli_KTE117_V1/ na na na haploid bacteria 4790982 4790982 51.000000 0 94 94 NCBI RefSeq GCF_000326205.1-RS_2025_06_13 2025-06-13 4671 4448 83 na GCF_000326225.1 PRJNA224116 SAMN00847699 ANXU00000000.1 na 1169381 562 Escherichia coli KTE124 strain=KTE124 na latest Contig Major Full 2012-12-19 Esch_coli_KTE124_V1 Broad Institute GCA_000326225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/225/GCF_000326225.1_Esch_coli_KTE124_V1/ na na na haploid bacteria 5127674 5127674 50.500000 0 127 127 NCBI RefSeq GCF_000326225.1-RS_2025_07_12 2025-07-12 5074 4681 91 na GCF_000326245.1 PRJNA224116 SAMN00847701 ANXW00000000.1 na 1169383 562 Escherichia coli KTE128 strain=KTE128 na latest Contig Major Full 2012-12-19 Esch_coli_KTE128_V1 Broad Institute GCA_000326245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/245/GCF_000326245.1_Esch_coli_KTE128_V1/ na na na haploid bacteria 5073631 5073631 50.500000 0 139 139 NCBI RefSeq GCF_000326245.1-RS_2025_06_13 2025-06-13 5015 4728 84 na GCF_000326265.1 PRJNA224116 SAMN00847702 ANXX00000000.1 na 1169384 562 Escherichia coli KTE129 strain=KTE129 na latest Contig Major Full 2012-12-19 Esch_coli_KTE129_V1 Broad Institute GCA_000326265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/265/GCF_000326265.1_Esch_coli_KTE129_V1/ na na na haploid bacteria 5190755 5190755 50.500000 0 136 136 NCBI RefSeq GCF_000326265.1-RS_2025_06_13 2025-06-13 5205 4830 96 na GCF_000326285.1 PRJNA224116 SAMN00847703 ANXY00000000.1 na 1169385 562 Escherichia coli KTE131 strain=KTE131 na latest Contig Major Full 2012-12-19 Esch_coli_KTE131_V1 Broad Institute GCA_000326285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/285/GCF_000326285.1_Esch_coli_KTE131_V1/ na na na haploid bacteria 4981218 4981218 50.500000 0 100 100 NCBI RefSeq GCF_000326285.1-RS_2025_06_13 2025-06-13 4877 4564 84 na GCF_000326305.1 PRJNA224116 SAMN00847704 ANXZ00000000.1 na 1169386 562 Escherichia coli KTE133 strain=KTE133 na latest Contig Major Full 2012-12-19 Esch_coli_KTE133_V1 Broad Institute GCA_000326305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/305/GCF_000326305.1_Esch_coli_KTE133_V1/ na na na haploid bacteria 4983540 4983540 50.500000 0 66 66 NCBI RefSeq GCF_000326305.1-RS_2025_07_12 2025-07-12 4836 4549 91 na GCF_000326325.1 PRJNA224116 SAMN00847705 ANYA00000000.1 na 1169387 562 Escherichia coli KTE137 strain=KTE137 na latest Contig Major Full 2012-12-19 Esch_coli_KTE137_V1 Broad Institute GCA_000326325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/325/GCF_000326325.1_Esch_coli_KTE137_V1/ na na na haploid bacteria 5001541 5001541 50.500000 0 99 99 NCBI RefSeq GCF_000326325.1-RS_2025_06_15 2025-06-15 4944 4618 97 na GCF_000326345.1 PRJNA224116 SAMN00847707 ANYC00000000.1 na 1169389 562 Escherichia coli KTE139 strain=KTE139 na latest Contig Major Full 2012-12-19 Esch_coli_KTE139_V1 Broad Institute GCA_000326345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/345/GCF_000326345.1_Esch_coli_KTE139_V1/ na na na haploid bacteria 4884312 4884312 50.500000 0 108 108 NCBI RefSeq GCF_000326345.1-RS_2025_07_09 2025-07-09 4791 4501 82 na GCF_000326365.1 PRJNA224116 SAMN00847709 ANYE00000000.1 na 1169391 562 Escherichia coli KTE148 strain=KTE148 na latest Contig Major Full 2012-12-19 Esch_coli_KTE148_V1 Broad Institute GCA_000326365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/365/GCF_000326365.1_Esch_coli_KTE148_V1/ na na na haploid bacteria 5099912 5099912 50.500000 0 144 144 NCBI RefSeq GCF_000326365.1-RS_2025_06_13 2025-06-13 5122 4791 92 na GCF_000326385.1 PRJNA224116 SAMN00847711 ANYG00000000.1 na 1169393 562 Escherichia coli KTE153 strain=KTE153 na latest Contig Major Full 2012-12-19 Esch_coli_KTE153_V1 Broad Institute GCA_000326385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/385/GCF_000326385.1_Esch_coli_KTE153_V1/ na na na haploid bacteria 4985430 4985430 50.500000 0 99 99 NCBI RefSeq GCF_000326385.1-RS_2025_06_13 2025-06-13 4863 4525 86 na GCF_000326405.1 PRJNA224116 SAMN00847713 ANYI00000000.1 na 1169395 562 Escherichia coli KTE160 strain=KTE160 na latest Contig Major Full 2012-12-19 Esch_coli_KTE160_V1 Broad Institute GCA_000326405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/405/GCF_000326405.1_Esch_coli_KTE160_V1/ na na na haploid bacteria 4987997 4987997 50.500000 0 110 110 NCBI RefSeq GCF_000326405.1-RS_2025_06_13 2025-06-13 4880 4539 89 na GCF_000326425.1 PRJNA224116 SAMN00847714 ANYJ00000000.1 na 1169396 562 Escherichia coli KTE163 strain=KTE163 na latest Contig Major Full 2012-12-19 Esch_coli_KTE163_V1 Broad Institute GCA_000326425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/425/GCF_000326425.1_Esch_coli_KTE163_V1/ na na na haploid bacteria 5000759 5000759 50.500000 0 99 99 NCBI RefSeq GCF_000326425.1-RS_2025_06_13 2025-06-13 4940 4647 97 na GCF_000326445.1 PRJNA224116 SAMN00847717 ANYM00000000.1 na 1169399 562 Escherichia coli KTE168 strain=KTE168 na latest Contig Major Full 2012-12-19 Esch_coli_KTE168_V1 Broad Institute GCA_000326445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/445/GCF_000326445.1_Esch_coli_KTE168_V1/ na na na haploid bacteria 5099397 5099397 50.500000 0 96 96 NCBI RefSeq GCF_000326445.1-RS_2025_06_13 2025-06-13 5013 4692 93 na GCF_000326465.1 PRJNA224116 SAMN00847719 ANYO00000000.1 na 1169401 562 Escherichia coli KTE176 strain=KTE176 na latest Contig Major Full 2012-12-19 Esch_coli_KTE176_V1 Broad Institute GCA_000326465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/465/GCF_000326465.1_Esch_coli_KTE176_V1/ na na na haploid bacteria 5018539 5018539 50.500000 0 89 89 NCBI RefSeq GCF_000326465.1-RS_2025_06_13 2025-06-13 4967 4634 86 na GCF_000326485.1 PRJNA224116 SAMN00847721 ANYQ00000000.1 na 1169403 562 Escherichia coli KTE179 strain=KTE179 na latest Contig Major Full 2012-12-19 Esch_coli_KTE179_V1 Broad Institute GCA_000326485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/485/GCF_000326485.1_Esch_coli_KTE179_V1/ na na na haploid bacteria 5118737 5118737 50.500000 0 84 84 NCBI RefSeq GCF_000326485.1-RS_2025_06_13 2025-06-13 5090 4760 89 na GCF_000326505.1 PRJNA224116 SAMN00847681 ANYT00000000.1 na 1169363 562 Escherichia coli KTE82 strain=KTE82 na latest Contig Major Full 2012-12-19 Esch_coli_KTE82_V1 Broad Institute GCA_000326505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/505/GCF_000326505.1_Esch_coli_KTE82_V1/ na na na haploid bacteria 5220782 5220782 50.500000 0 169 169 NCBI RefSeq GCF_000326505.1-RS_2025_06_14 2025-06-14 5272 4959 85 na GCF_000326525.1 PRJNA224116 SAMN00847686 ANYX00000000.1 na 1169368 562 Escherichia coli KTE94 strain=KTE94 na latest Contig Major Full 2012-12-19 Esch_coli_KTE94_V1 Broad Institute GCA_000326525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/525/GCF_000326525.1_Esch_coli_KTE94_V1/ na na na haploid bacteria 5089558 5089558 50.500000 0 122 122 NCBI RefSeq GCF_000326525.1-RS_2025_06_14 2025-06-14 5018 4686 85 na GCF_000326545.1 PRJNA224116 SAMN00847688 ANYZ00000000.1 na 1169370 562 Escherichia coli KTE97 strain=KTE97 na latest Contig Major Full 2012-12-19 Esch_coli_KTE97_V1 Broad Institute GCA_000326545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/545/GCF_000326545.1_Esch_coli_KTE97_V1/ na na na haploid bacteria 4869008 4869008 50.500000 0 84 84 NCBI RefSeq GCF_000326545.1-RS_2025_07_11 2025-07-11 4736 4459 82 na GCF_000326565.1 PRJNA224116 SAMN00847694 ANXP00000000.1 na 1169376 562 Escherichia coli KTE112 strain=KTE112 na latest Contig Major Full 2012-12-19 Esch_coli_KTE112_V1 Broad Institute GCA_000326565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/565/GCF_000326565.1_Esch_coli_KTE112_V1/ na na na haploid bacteria 5290836 5290836 50.500000 0 177 177 NCBI RefSeq GCF_000326565.1-RS_2025_06_14 2025-06-14 5347 4982 98 na GCF_000326585.1 PRJNA224116 SAMN00847695 ANXQ00000000.1 na 1169377 562 Escherichia coli KTE113 strain=KTE113 na latest Contig Major Full 2012-12-19 Esch_coli_KTE113_V1 Broad Institute GCA_000326585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/585/GCF_000326585.1_Esch_coli_KTE113_V1/ na na na haploid bacteria 5026156 5026156 50.500000 0 87 87 NCBI RefSeq GCF_000326585.1-RS_2025_06_16 2025-06-16 4936 4600 84 na GCF_000326605.1 PRJNA224116 SAMN00847718 ANYN00000000.1 na 1169400 562 Escherichia coli KTE174 strain=KTE174 na latest Contig Major Full 2012-12-19 Esch_coli_KTE174_V1 Broad Institute GCA_000326605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/605/GCF_000326605.1_Esch_coli_KTE174_V1/ na na na haploid bacteria 4986620 4986620 50.500000 0 111 111 NCBI RefSeq GCF_000326605.1-RS_2025_06_14 2025-06-14 4881 4533 93 na GCF_000326625.1 PRJNA224116 SAMN00847684 ANYV00000000.1 na 1169366 562 Escherichia coli KTE88 strain=KTE88 na latest Contig Major Full 2012-12-19 Esch_coli_KTE88_V1 Broad Institute GCA_000326625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/625/GCF_000326625.1_Esch_coli_KTE88_V1/ na na na haploid bacteria 4956656 4956656 50.500000 0 104 104 NCBI RefSeq GCF_000326625.1-RS_2025_06_16 2025-06-16 4882 4541 93 na GCF_000326645.1 PRJNA224116 SAMN00847685 ANYW00000000.1 na 1169367 562 Escherichia coli KTE90 strain=KTE90 na latest Contig Major Full 2012-12-19 Esch_coli_KTE90_V1 Broad Institute GCA_000326645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/645/GCF_000326645.1_Esch_coli_KTE90_V1/ na na na haploid bacteria 4982349 4982349 50.500000 0 91 91 NCBI RefSeq GCF_000326645.1-RS_2025_06_14 2025-06-14 4892 4596 91 na GCF_000326665.1 PRJNA224116 SAMN00847689 ANZA00000000.1 na 1169371 562 Escherichia coli KTE99 strain=KTE99 na latest Contig Major Full 2012-12-19 Esch_coli_KTE99_V1 Broad Institute GCA_000326665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/665/GCF_000326665.1_Esch_coli_KTE99_V1/ na na na haploid bacteria 5043302 5043302 50.500000 0 122 122 NCBI RefSeq GCF_000326665.1-RS_2025_06_14 2025-06-14 4969 4612 93 na GCF_000326685.1 PRJNA224116 SAMN00847706 ANYB00000000.1 na 1169388 562 Escherichia coli KTE138 strain=KTE138 na latest Contig Major Full 2012-12-19 Esch_coli_KTE138_V1 Broad Institute GCA_000326685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/685/GCF_000326685.1_Esch_coli_KTE138_V1/ na na na haploid bacteria 4631038 4631038 50.500000 0 81 81 NCBI RefSeq GCF_000326685.1-RS_2025_06_14 2025-06-14 4534 4336 88 na GCF_000326705.1 PRJNA224116 SAMN00847708 ANYD00000000.1 na 1169390 562 Escherichia coli KTE145 strain=KTE145 na latest Contig Major Full 2012-12-19 Esch_coli_KTE145_V1 Broad Institute GCA_000326705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/705/GCF_000326705.1_Esch_coli_KTE145_V1/ na na na haploid bacteria 4925475 4925475 50.500000 0 92 92 NCBI RefSeq GCF_000326705.1-RS_2025_07_13 2025-07-13 4810 4489 89 na GCF_000326725.1 PRJNA224116 SAMN00847710 ANYF00000000.1 na 1169392 562 Escherichia coli KTE150 strain=KTE150 na latest Contig Major Full 2012-12-19 Esch_coli_KTE150_V1 Broad Institute GCA_000326725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/725/GCF_000326725.1_Esch_coli_KTE150_V1/ na na na haploid bacteria 4892219 4892219 50.500000 0 55 55 NCBI RefSeq GCF_000326725.1-RS_2025_07_08 2025-07-08 4810 4582 76 na GCF_000326745.1 PRJNA224116 SAMN00847712 ANYH00000000.1 na 1169394 562 Escherichia coli KTE157 strain=KTE157 na latest Contig Major Full 2012-12-19 Esch_coli_KTE157_V1 Broad Institute GCA_000326745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/745/GCF_000326745.1_Esch_coli_KTE157_V1/ na na na haploid bacteria 5063872 5063872 50.500000 0 127 127 NCBI RefSeq GCF_000326745.1-RS_2025_06_14 2025-06-14 5059 4727 93 na GCF_000326765.1 PRJNA224116 SAMN00847715 ANYK00000000.1 na 1169397 562 Escherichia coli KTE166 strain=KTE166 na latest Contig Major Full 2012-12-19 Esch_coli_KTE166_V1 Broad Institute GCA_000326765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/765/GCF_000326765.1_Esch_coli_KTE166_V1/ na na na haploid bacteria 4867765 4867765 50.500000 0 92 92 NCBI RefSeq GCF_000326765.1-RS_2025_07_08 2025-07-08 4793 4510 94 na GCF_000326785.1 PRJNA224116 SAMN00847720 ANYP00000000.1 na 1169402 562 Escherichia coli KTE177 strain=KTE177 na latest Contig Major Full 2012-12-19 Esch_coli_KTE177_V1 Broad Institute GCA_000326785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/785/GCF_000326785.1_Esch_coli_KTE177_V1/ na na na haploid bacteria 5063548 5063548 50.500000 0 114 114 NCBI RefSeq GCF_000326785.1-RS_2025_06_16 2025-06-16 4998 4728 89 na GCF_000326805.1 PRJNA224116 SAMN00847722 ANYR00000000.1 na 1169404 562 Escherichia coli KTE180 strain=KTE180 na latest Contig Major Full 2012-12-19 Esch_coli_KTE180_V1 Broad Institute GCA_000326805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/805/GCF_000326805.1_Esch_coli_KTE180_V1/ na na na haploid bacteria 5125477 5125477 50.500000 0 112 112 NCBI RefSeq GCF_000326805.1-RS_2025_06_13 2025-06-13 5119 4794 92 na GCF_000326825.1 PRJNA224116 SAMN00847683 ANYS00000000.1 na 1169365 562 Escherichia coli KTE232 strain=KTE232 na latest Contig Major Full 2012-12-19 Esch_coli_KTE232_V1 Broad Institute GCA_000326825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/825/GCF_000326825.1_Esch_coli_KTE232_V1/ na na na haploid bacteria 4755075 4755075 51.000000 0 89 89 NCBI RefSeq GCF_000326825.1-RS_2025_07_08 2025-07-08 4673 4383 92 na GCF_000326845.1 PRJNA224116 SAMN00847687 ANYY00000000.1 na 1169369 562 Escherichia coli KTE95 strain=KTE95 na latest Contig Major Full 2012-12-19 Esch_coli_KTE95_V1 Broad Institute GCA_000326845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/845/GCF_000326845.1_Esch_coli_KTE95_V1/ na na na haploid bacteria 4966979 4966979 50.500000 0 108 108 NCBI RefSeq GCF_000326845.1-RS_2025_07_11 2025-07-11 4957 4685 85 na GCF_000326885.1 PRJNA224116 SAMN00847682 ANYU00000000.1 na 1169364 562 Escherichia coli KTE85 strain=KTE85 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE85_V1 Broad Institute GCA_000326885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/885/GCF_000326885.1_Esch_coli_KTE85_V1/ na na na haploid bacteria 5360445 5360435 50.500000 0 173 174 NCBI RefSeq GCF_000326885.1-RS_2025_06_13 2025-06-13 5422 5030 95 na GCF_000326905.1 PRJNA224116 SAMN00847716 ANYL00000000.1 na 1169398 562 Escherichia coli KTE167 strain=KTE167 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE167_V1 Broad Institute GCA_000326905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/905/GCF_000326905.1_Esch_coli_KTE167_V1/ na na na haploid bacteria 4973442 4973347 50.500000 0 108 109 NCBI RefSeq GCF_000326905.1-RS_2025_06_13 2025-06-13 4866 4526 88 na GCF_000326925.1 PRJNA224116 SAMN00847697 ANXS00000000.1 na 1169379 562 Escherichia coli KTE120 strain=KTE120 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE120_V1 Broad Institute GCA_000326925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/925/GCF_000326925.1_Esch_coli_KTE120_V1/ na na na haploid bacteria 5099228 5099138 50.500000 0 189 190 NCBI RefSeq GCF_000326925.1-RS_2025_06_13 2025-06-13 5186 4813 89 na GCF_000326945.1 PRJNA224116 SAMN00847698 ANXT00000000.1 na 1169380 562 Escherichia coli KTE122 strain=KTE122 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE122_V1 Broad Institute GCA_000326945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/945/GCF_000326945.1_Esch_coli_KTE122_V1/ na na na haploid bacteria 5151488 5151403 50.500000 0 150 151 NCBI RefSeq GCF_000326945.1-RS_2025_06_13 2025-06-13 5139 4849 85 na GCF_000326965.1 PRJNA224116 SAMN00847700 ANXV00000000.1 na 1169382 562 Escherichia coli KTE125 strain=KTE125 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE125_V1 Broad Institute GCA_000326965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/326/965/GCF_000326965.1_Esch_coli_KTE125_V1/ na na na haploid bacteria 5131751 5131691 50.500000 0 115 116 NCBI RefSeq GCF_000326965.1-RS_2025_06_13 2025-06-13 5048 4745 101 na GCF_000327045.1 PRJNA224116 SAMN02232063 na reference genome 765912 80679 Thioflavicoccus mobilis 8321 strain=8321 na latest Complete Genome Major Full 2012-12-20 ASM32704v1 DOE Joint Genome Institute GCA_000327045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/045/GCF_000327045.1_ASM32704v1/ na assembly from type material na haploid bacteria 4137521 4137521 65.500000 2 2 2 NCBI RefSeq GCF_000327045.1-RS_2026_05_02 2026-05-02 3746 3619 57 na GCF_000327065.1 PRJNA224116 SAMN02232046 na na 644801 316 Stutzerimonas stutzeri RCH2 strain=RCH2 na latest Complete Genome Major Full 2012-12-20 ASM32706v1 DOE Joint Genome Institute GCA_000327065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/065/GCF_000327065.1_ASM32706v1/ na na na haploid bacteria 4600489 4600489 62.500000 4 4 4 NCBI RefSeq GCF_000327065.1-RS_2025_03_12 2025-03-12 4366 4240 76 na GCF_000327105.3 PRJNA224116 SAMN00262231 AGUT00000000.2 na 991980 666 Vibrio cholerae HC-64A1 strain=HC-64A1 na latest Scaffold Major Full 2013-02-27 ASM32710v3 Institute for Genome Sciences GCA_000327105.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/105/GCF_000327105.3_ASM32710v3/ na na na haploid bacteria 4032042 4030276 47.500000 0 93 123 NCBI RefSeq GCF_000327105.3-RS_2026_05_01 2026-05-01 3699 3566 87 na GCF_000327125.3 PRJNA224116 SAMN00262226 AGUU00000000.2 na 991981 666 Vibrio cholerae HC-65A1 strain=HC-65A1 na latest Scaffold Major Full 2013-02-27 ASM32712v3 Institute for Genome Sciences GCA_000327125.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/125/GCF_000327125.3_ASM32712v3/ na na na haploid bacteria 4028731 4026255 47.500000 0 96 130 NCBI RefSeq GCF_000327125.3-RS_2026_05_01 2026-05-01 3691 3560 84 na GCF_000327145.3 PRJNA224116 SAMN00262235 AGUV00000000.2 na 991982 666 Vibrio cholerae HC-67A1 strain=HC-67A1 na latest Scaffold Major Full 2013-02-27 ASM32714v3 Institute for Genome Sciences GCA_000327145.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/145/GCF_000327145.3_ASM32714v3/ na na na haploid bacteria 4026751 4024648 47.500000 0 95 122 NCBI RefSeq GCF_000327145.3-RS_2026_04_27 2026-04-27 3683 3557 82 na GCF_000327165.3 PRJNA224116 SAMN00262236 AGUW00000000.2 na 991983 666 Vibrio cholerae HC-68A1 strain=HC-68A1 na latest Scaffold Major Full 2013-02-27 ASM32716v3 Institute for Genome Sciences GCA_000327165.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/165/GCF_000327165.3_ASM32716v3/ na na na haploid bacteria 4026495 4024476 47.500000 0 90 124 NCBI RefSeq GCF_000327165.3-RS_2026_05_01 2026-05-01 3680 3557 76 na GCF_000327185.3 PRJNA224116 SAMN00262233 AGUX00000000.2 na 991985 666 Vibrio cholerae HC-71A1 strain=HC-71A1 na latest Scaffold Major Full 2013-02-27 ASM32718v3 Institute for Genome Sciences GCA_000327185.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/185/GCF_000327185.3_ASM32718v3/ na na na haploid bacteria 4028948 4026155 47.500000 0 91 119 NCBI RefSeq GCF_000327185.3-RS_2026_06_01 2026-06-01 3691 3555 82 na GCF_000327205.3 PRJNA224116 SAMN00262576 AGUY00000000.2 na 1000953 666 Vibrio cholerae HC-72A2 strain=HC-72A2 na latest Scaffold Major Full 2013-02-27 ASM32720v3 Institute for Genome Sciences GCA_000327205.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/205/GCF_000327205.3_ASM32720v3/ na na na haploid bacteria 4028422 4026713 47.500000 0 94 125 NCBI RefSeq GCF_000327205.3-RS_2026_06_04 2026-06-04 3693 3551 85 na GCF_000327225.3 PRJNA224116 SAMN00262223 AGUZ00000000.2 na 992009 666 Vibrio cholerae HC-78A1 strain=HC-78A1 na latest Scaffold Major Full 2013-02-27 ASM32722v3 Institute for Genome Sciences GCA_000327225.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/225/GCF_000327225.3_ASM32722v3/ na na na haploid bacteria 3937766 3935907 48.000000 0 133 172 NCBI RefSeq GCF_000327225.3-RS_2026_01_11 2026-01-11 3638 3460 81 na GCF_000327245.3 PRJNA224116 SAMN00262234 AGVB00000000.2 na 991988 666 Vibrio cholerae HC-80A1 strain=HC-80A1 na latest Scaffold Major Full 2013-02-27 ASM32724v3 Institute for Genome Sciences GCA_000327245.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/245/GCF_000327245.3_ASM32724v3/ na na na haploid bacteria 4032382 4029801 47.500000 0 115 150 NCBI RefSeq GCF_000327245.3-RS_2026_06_16 2026-06-16 3698 3555 81 na GCF_000327265.1 PRJNA224116 SAMD00041804 BAHA00000000.1 na 630626 563 Shimwellia blattae DSM 4481 = NBRC 105725 strain=NBRC 105725 na latest Contig Major Full 2012-09-05 ASM32726v1 National Institute of Technology and Evaluation (NITE) GCA_000327265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/265/GCF_000327265.1_ASM32726v1/ na assembly from type material na haploid bacteria 4032904 4032904 56.500000 0 74 74 NCBI RefSeq GCF_000327265.1-RS_2025_09_02 2025-09-02 3872 3723 81 na GCF_000327285.1 PRJNA224116 SAMEA2272076 CALK00000000.1 na 1211819 1468449 Holdemania massiliensis AP2 strain=AP2 na latest Scaffold Major Full 2012-10-03 ASM32728v1 ebi GCA_000327285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/285/GCF_000327285.1_ASM32728v1/ na assembly from type material na haploid bacteria 3811476 3757316 47.000000 0 17 66 NCBI RefSeq GCF_000327285.1-RS_2026_04_23 2026-04-23 3526 3455 53 na GCF_000327325.1 PRJNA224116 SAMD00041793 BAHB00000000.1 na 1077975 36822 Gordonia rubripertincta NBRC 101908 strain=NBRC 101908 na latest Contig Major Full 2012-09-05 ASM32732v1 National Institute of Technology and Evaluation GCA_000327325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/325/GCF_000327325.1_ASM32732v1/ na assembly from type material na haploid bacteria 5204225 5204225 67.500000 0 134 134 NCBI RefSeq GCF_000327325.1-RS_2025_09_02 2025-09-02 4822 4662 59 na GCF_000327395.2 PRJNA224116 SAMN01730980 na na 1179777 1179777 Mycoplasma feriruminatoris strain=G5847 na latest Complete Genome Major Full 2022-02-24 ASM32739v2 International Livestock Research Institute GCA_000327395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/395/GCF_000327395.2_ASM32739v2/ na assembly from type material na haploid bacteria 1075603 1075603 24.000000 1 1 1 NCBI RefSeq GCF_000327395.2-RS_2025_12_05 2025-12-05 904 850 39 23469346 GCF_000327465.1 PRJNA224116 SAMN02471214 AMCM00000000.1 na 1267580 33934 Anoxybacillus flavithermus TNO-09.006 strain=TNO-09.006 na latest Scaffold Major Full 2013-01-02 Anoxybacillus flavithermus TNO-09.006 v1 CMBI GCA_000327465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/465/GCF_000327465.1_Anoxybacillus_flavithermus_TNO-09.006_v1/ na na na haploid bacteria 2658425 2651725 42.000000 0 1 68 NCBI RefSeq GCF_000327465.1-RS_2026_01_30 2026-01-30 2967 2636 76 23469333 GCF_000327485.1 PRJNA224116 SAMN02232038 na reference genome 593750 882104 Methanoregula formicica SMSP strain=SMSP na latest Complete Genome Major Full 2012-12-21 ASM32748v1 DOE Joint Genome Institute GCA_000327485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/485/GCF_000327485.1_ASM32748v1/ na assembly from type material na haploid archaea 2820858 2820858 55.000000 1 1 1 NCBI RefSeq GCF_000327485.1-RS_2025_11_21 2025-11-21 2916 2853 53 25189582 GCF_000327505.1 PRJNA224116 SAMN02261429 na na 673860 673860 Candidatus Aciduliprofundum sp. MAR08-339 strain=MAR08-339 na latest Complete Genome Major Full 2012-12-21 ASM32750v1 JGI GCA_000327505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/505/GCF_000327505.1_ASM32750v1/ na na na haploid archaea 1437090 1437090 44.000000 1 1 1 NCBI RefSeq GCF_000327505.1-RS_2024_10_21 2024-10-21 1578 1523 51 22363325 GCF_000327545.2 PRJNA224116 SAMN01054387 ANSI00000000.1 na 1095665 487 Neisseria meningitidis 63006 strain=63006 na latest Contig Major Full 2012-12-21 ASM32754v2 Institute for Genome Sciences GCA_000327545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/545/GCF_000327545.2_ASM32754v2/ na na na haploid bacteria 2197939 2197939 52.000000 0 24 24 NCBI RefSeq GCF_000327545.2-RS_2026_02_17 2026-02-17 2245 1969 90 na GCF_000327565.2 PRJNA224116 SAMN01055148 ANSD00000000.1 na 1095670 487 Neisseria meningitidis NM3642 strain=NM3642 na latest Contig Major Full 2012-12-21 ASM32756v2 Institute for Genome Sciences GCA_000327565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/565/GCF_000327565.2_ASM32756v2/ na na na haploid bacteria 2211348 2211348 52.000000 0 28 28 NCBI RefSeq GCF_000327565.2-RS_2026_01_07 2026-01-07 2265 1986 95 na GCF_000327585.2 PRJNA224116 SAMN01055151 ANSA00000000.1 na 1095673 487 Neisseria meningitidis 97020 strain=97020 na latest Contig Major Full 2012-12-21 ASM32758v2 Institute for Genome Sciences GCA_000327585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/585/GCF_000327585.2_ASM32758v2/ na na na haploid bacteria 2199064 2199064 52.000000 0 25 25 NCBI RefSeq GCF_000327585.2-RS_2026_02_17 2026-02-17 2237 1969 88 na GCF_000327605.2 PRJNA224116 SAMN01055155 ANRX00000000.1 na 1095676 487 Neisseria meningitidis 96023 strain=96023 na latest Contig Major Full 2012-12-21 ASM32760v2 Institute for Genome Sciences GCA_000327605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/605/GCF_000327605.2_ASM32760v2/ na na na haploid bacteria 2209603 2209603 52.000000 0 23 23 NCBI RefSeq GCF_000327605.2-RS_2026_02_17 2026-02-17 2249 1965 85 na GCF_000327625.2 PRJNA224116 SAMN01055166 ANRO00000000.1 na 1095685 487 Neisseria meningitidis M7124 strain=M7124 na latest Contig Major Full 2012-12-21 ASM32762v2 Institute for Genome Sciences GCA_000327625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/625/GCF_000327625.2_ASM32762v2/ na na na haploid bacteria 2190687 2190687 51.500000 0 24 24 NCBI RefSeq GCF_000327625.2-RS_2025_02_17 2025-02-17 2216 1947 88 na GCF_000327645.2 PRJNA224116 SAMN01055175 ANRI00000000.1 na 1095691 487 Neisseria meningitidis 97014 strain=97014 na latest Contig Major Full 2012-12-21 ASM32764v2 Institute for Genome Sciences GCA_000327645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/645/GCF_000327645.2_ASM32764v2/ na na na haploid bacteria 2215774 2215774 52.000000 0 25 25 NCBI RefSeq GCF_000327645.2-RS_2025_08_25 2025-08-25 2289 2004 90 na GCF_000327665.2 PRJNA224116 SAMN01055186 ANRF00000000.1 na 1095694 487 Neisseria meningitidis 63041 strain=63041 na latest Contig Major Full 2012-12-21 ASM32766v2 Institute for Genome Sciences GCA_000327665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/665/GCF_000327665.2_ASM32766v2/ na na na haploid bacteria 2184101 2184101 52.000000 0 27 27 NCBI RefSeq GCF_000327665.2-RS_2026_02_17 2026-02-17 2229 1952 82 na GCF_000327685.2 PRJNA224116 SAMN01055189 ANRC00000000.1 na 1095697 487 Neisseria meningitidis 97021 strain=97021 na latest Contig Major Full 2012-12-21 ASM32768v2 Institute for Genome Sciences GCA_000327685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/685/GCF_000327685.2_ASM32768v2/ na na na haploid bacteria 2191336 2191336 52.000000 0 20 20 NCBI RefSeq GCF_000327685.2-RS_2025_08_25 2025-08-25 2272 1998 81 na GCF_000327705.2 PRJNA224116 SAMN01055194 ANQZ00000000.1 na 1095700 487 Neisseria meningitidis 87255 strain=87255 na latest Contig Major Full 2012-12-21 ASM32770v2 Institute for Genome Sciences GCA_000327705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/705/GCF_000327705.2_ASM32770v2/ na na na haploid bacteria 2158208 2158208 51.500000 0 21 21 NCBI RefSeq GCF_000327705.2-RS_2026_02_17 2026-02-17 2177 1926 75 na GCF_000327725.2 PRJNA224116 SAMN01055147 ANSE00000000.1 na 1095669 487 Neisseria meningitidis 2007056 strain=2007056 na latest Contig Major Full 2012-12-21 ASM32772v2 Institute for Genome Sciences GCA_000327725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/725/GCF_000327725.2_ASM32772v2/ na na na haploid bacteria 2198685 2198685 52.000000 0 19 19 NCBI RefSeq GCF_000327725.2-RS_2026_02_17 2026-02-17 2225 1967 79 na GCF_000327745.2 PRJNA224116 SAMN01055150 ANSB00000000.1 na 1095672 487 Neisseria meningitidis 69096 strain=69096 na latest Contig Major Full 2012-12-21 ASM32774v2 Institute for Genome Sciences GCA_000327745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/745/GCF_000327745.2_ASM32774v2/ na na na haploid bacteria 2249347 2249347 51.500000 0 31 31 NCBI RefSeq GCF_000327745.2-RS_2026_01_07 2026-01-07 2327 2019 96 na GCF_000327785.2 PRJNA224116 SAMN01055154 ANRY00000000.1 na 1095675 487 Neisseria meningitidis 65014 strain=65014 na latest Contig Major Full 2012-12-21 ASM32778v2 Institute for Genome Sciences GCA_000327785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/785/GCF_000327785.2_ASM32778v2/ na na na haploid bacteria 2179375 2179375 52.000000 0 25 25 NCBI RefSeq GCF_000327785.2-RS_2026_01_02 2026-01-02 2214 1957 80 na GCF_000327805.2 PRJNA224116 SAMN01055158 ANRV00000000.1 na 1095678 487 Neisseria meningitidis 63049 strain=63049 na latest Contig Major Full 2012-12-21 ASM32780v2 Institute for Genome Sciences GCA_000327805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/805/GCF_000327805.2_ASM32780v2/ na na na haploid bacteria 2195323 2195323 52.000000 0 23 23 NCBI RefSeq GCF_000327805.2-RS_2025_02_17 2025-02-17 2263 1949 95 na GCF_000327825.2 PRJNA224116 SAMN01055159 ANRU00000000.1 na 1095679 487 Neisseria meningitidis 4119 strain=4119 na latest Contig Major Full 2012-12-21 ASM32782v2 Institute for Genome Sciences GCA_000327825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/825/GCF_000327825.2_ASM32782v2/ na na na haploid bacteria 2236143 2236143 51.500000 0 42 42 NCBI RefSeq GCF_000327825.2-RS_2026_02_17 2026-02-17 2250 1981 85 na GCF_000327845.2 PRJNA224116 SAMN01055162 ANRS00000000.1 na 1095681 487 Neisseria meningitidis 9757 strain=9757 na latest Contig Major Full 2012-12-21 ASM32784v2 Institute for Genome Sciences GCA_000327845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/845/GCF_000327845.2_ASM32784v2/ na na na haploid bacteria 2240249 2240249 51.500000 0 32 32 NCBI RefSeq GCF_000327845.2-RS_2026_01_07 2026-01-07 2264 1982 82 na GCF_000327865.2 PRJNA224116 SAMN01055163 ANRR00000000.1 na 1095682 487 Neisseria meningitidis 9506 strain=9506 na latest Contig Major Full 2012-12-21 ASM32786v2 Institute for Genome Sciences GCA_000327865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/865/GCF_000327865.2_ASM32786v2/ na na na haploid bacteria 2241128 2241128 51.500000 0 21 21 NCBI RefSeq GCF_000327865.2-RS_2026_02_17 2026-02-17 2263 1983 83 na GCF_000327885.2 PRJNA224116 SAMN01055165 ANRP00000000.1 na 1095684 487 Neisseria meningitidis NM174 strain=NM174 na latest Contig Major Full 2012-12-21 ASM32788v2 Institute for Genome Sciences GCA_000327885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/885/GCF_000327885.2_ASM32788v2/ na na na haploid bacteria 2174794 2174794 51.500000 0 18 18 NCBI RefSeq GCF_000327885.2-RS_2026_01_02 2026-01-02 2212 1956 87 na GCF_000327905.2 PRJNA224116 SAMN01055168 ANRM00000000.1 na 1095687 487 Neisseria meningitidis NM762 strain=NM762 na latest Contig Major Full 2012-12-21 ASM32790v2 Institute for Genome Sciences GCA_000327905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/905/GCF_000327905.2_ASM32790v2/ na na na haploid bacteria 2191622 2191622 51.500000 0 22 22 NCBI RefSeq GCF_000327905.2-RS_2026_01_06 2026-01-06 2214 1956 90 na GCF_000327925.2 PRJNA224116 SAMN01055169 ANRL00000000.1 na 1095688 487 Neisseria meningitidis NM586 strain=NM586 na latest Contig Major Full 2012-12-21 ASM32792v2 Institute for Genome Sciences GCA_000327925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/925/GCF_000327925.2_ASM32792v2/ na na na haploid bacteria 2227248 2227248 51.500000 0 25 25 NCBI RefSeq GCF_000327925.2-RS_2026_01_07 2026-01-07 2272 1989 95 na GCF_000327945.2 PRJNA224116 SAMN01055185 ANRJ00000000.1 na 1095690 487 Neisseria meningitidis M13255 strain=M13255 na latest Contig Major Full 2012-12-21 ASM32794v2 Institute for Genome Sciences GCA_000327945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/945/GCF_000327945.2_ASM32794v2/ na na na haploid bacteria 2254673 2254673 51.500000 0 38 38 NCBI RefSeq GCF_000327945.2-RS_2026_01_07 2026-01-07 2282 1986 87 na GCF_000327965.2 PRJNA224116 SAMN01055188 ANRG00000000.1 na 1095693 487 Neisseria meningitidis 2006087 strain=2006087 na latest Contig Major Full 2012-12-21 ASM32796v2 Institute for Genome Sciences GCA_000327965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/965/GCF_000327965.2_ASM32796v2/ na na na haploid bacteria 2200589 2200589 52.000000 0 28 28 NCBI RefSeq GCF_000327965.2-RS_2026_02_17 2026-02-17 2287 2002 84 na GCF_000327985.2 PRJNA224116 SAMN01055190 ANRD00000000.1 na 1095696 487 Neisseria meningitidis 88050 strain=88050 na latest Contig Major Full 2012-12-21 ASM32798v2 Institute for Genome Sciences GCA_000327985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/327/985/GCF_000327985.2_ASM32798v2/ na na na haploid bacteria 2204399 2204399 52.000000 0 19 19 NCBI RefSeq GCF_000327985.2-RS_2026_01_07 2026-01-07 2245 1964 89 na GCF_000328005.2 PRJNA224116 SAMN01055192 ANRA00000000.1 na 1095699 487 Neisseria meningitidis 98080 strain=98080 na latest Contig Major Full 2012-12-21 ASM32800v2 Institute for Genome Sciences GCA_000328005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/005/GCF_000328005.2_ASM32800v2/ na na na haploid bacteria 2188959 2188959 51.500000 0 38 38 NCBI RefSeq GCF_000328005.2-RS_2026_02_17 2026-02-17 2255 1981 90 na GCF_000328025.2 PRJNA224116 SAMN01055144 ANSH00000000.1 na 1095666 487 Neisseria meningitidis 70030 strain=70030 na latest Contig Major Full 2012-12-21 ASM32802v2 Institute for Genome Sciences GCA_000328025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/025/GCF_000328025.2_ASM32802v2/ na na na haploid bacteria 2256762 2256762 51.500000 0 25 25 NCBI RefSeq GCF_000328025.2-RS_2026_01_07 2026-01-07 2331 2033 89 na GCF_000328045.2 PRJNA224116 SAMN01055145 ANSG00000000.1 na 1095667 487 Neisseria meningitidis 77221 strain=77221 na latest Contig Major Full 2012-12-21 ASM32804v2 Institute for Genome Sciences GCA_000328045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/045/GCF_000328045.2_ASM32804v2/ na na na haploid bacteria 2272046 2272046 51.500000 0 31 31 NCBI RefSeq GCF_000328045.2-RS_2026_02_17 2026-02-17 2333 2038 91 na GCF_000328065.2 PRJNA224116 SAMN01055146 ANSF00000000.1 na 1095668 487 Neisseria meningitidis 2001212 strain=2001212 na latest Contig Major Full 2012-12-21 ASM32806v2 Institute for Genome Sciences GCA_000328065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/065/GCF_000328065.2_ASM32806v2/ na na na haploid bacteria 2216982 2216982 52.000000 0 28 28 NCBI RefSeq GCF_000328065.2-RS_2026_02_17 2026-02-17 2257 1980 86 na GCF_000328085.2 PRJNA224116 SAMN01055149 ANSC00000000.1 na 1095671 487 Neisseria meningitidis NM3652 strain=NM3652 na latest Contig Major Full 2012-12-21 ASM32808v2 Institute for Genome Sciences GCA_000328085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/085/GCF_000328085.2_ASM32808v2/ na na na haploid bacteria 2193737 2193737 52.000000 0 11 11 NCBI RefSeq GCF_000328085.2-RS_2026_01_07 2026-01-07 2232 1967 86 na GCF_000328105.2 PRJNA224116 SAMN01055156 ANRW00000000.1 na 1095677 487 Neisseria meningitidis 2004090 strain=2004090 na latest Contig Major Full 2012-12-21 ASM32810v2 Institute for Genome Sciences GCA_000328105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/105/GCF_000328105.2_ASM32810v2/ na na na haploid bacteria 2208714 2208714 52.000000 0 21 21 NCBI RefSeq GCF_000328105.2-RS_2026_01_07 2026-01-07 2255 1981 82 na GCF_000328125.2 PRJNA224116 SAMN01055161 ANRT00000000.1 na 1095680 487 Neisseria meningitidis 12888 strain=12888 na latest Contig Major Full 2012-12-21 ASM32812v2 Institute for Genome Sciences GCA_000328125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/125/GCF_000328125.2_ASM32812v2/ na na na haploid bacteria 2265713 2265713 51.500000 0 40 40 NCBI RefSeq GCF_000328125.2-RS_2025_02_17 2025-02-17 2281 1985 92 na GCF_000328145.2 PRJNA224116 SAMN01055164 ANRQ00000000.1 na 1095683 487 Neisseria meningitidis NM126 strain=NM126 na latest Contig Major Full 2012-12-21 ASM32814v2 Institute for Genome Sciences GCA_000328145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/145/GCF_000328145.2_ASM32814v2/ na na na haploid bacteria 2213119 2213119 51.500000 0 27 27 NCBI RefSeq GCF_000328145.2-RS_2025_02_17 2025-02-17 2259 1996 94 na GCF_000328165.2 PRJNA224116 SAMN01055167 ANRN00000000.1 na 1095686 487 Neisseria meningitidis M7089 strain=M7089 na latest Contig Major Full 2012-12-21 ASM32816v2 Institute for Genome Sciences GCA_000328165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/165/GCF_000328165.2_ASM32816v2/ na na na haploid bacteria 2168649 2168649 52.000000 0 30 30 NCBI RefSeq GCF_000328165.2-RS_2026_01_02 2026-01-02 2197 1940 84 na GCF_000328185.2 PRJNA224116 SAMN01055173 ANRK00000000.1 na 1095689 487 Neisseria meningitidis NM418 strain=NM418 na latest Contig Major Full 2012-12-21 ASM32818v2 Institute for Genome Sciences GCA_000328185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/185/GCF_000328185.2_ASM32818v2/ na na na haploid bacteria 2298608 2298608 51.500000 0 35 35 NCBI RefSeq GCF_000328185.2-RS_2025_02_17 2025-02-17 2308 2013 90 na GCF_000328205.2 PRJNA224116 SAMN01055184 ANRH00000000.1 na 1095692 487 Neisseria meningitidis 2002038 strain=2002038 na latest Contig Major Full 2012-12-21 ASM32820v2 Institute for Genome Sciences GCA_000328205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/205/GCF_000328205.2_ASM32820v2/ na na na haploid bacteria 2196214 2196214 52.000000 0 33 33 NCBI RefSeq GCF_000328205.2-RS_2026_02_17 2026-02-17 2273 1992 81 na GCF_000328225.2 PRJNA224116 SAMN01055187 ANRE00000000.1 na 1095695 487 Neisseria meningitidis 70012 strain=70012 na latest Contig Major Full 2012-12-21 ASM32822v2 Institute for Genome Sciences GCA_000328225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/225/GCF_000328225.2_ASM32822v2/ na na na haploid bacteria 2241206 2241206 51.500000 0 24 24 NCBI RefSeq GCF_000328225.2-RS_2026_02_17 2026-02-17 2318 2028 90 na GCF_000328245.2 PRJNA224116 SAMN01055193 ANRB00000000.1 na 1095698 487 Neisseria meningitidis 68094 strain=68094 na latest Contig Major Full 2012-12-21 ASM32824v2 Institute for Genome Sciences GCA_000328245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/245/GCF_000328245.2_ASM32824v2/ na na na haploid bacteria 2206813 2206813 51.500000 0 27 27 NCBI RefSeq GCF_000328245.2-RS_2026_02_17 2026-02-17 2270 1986 79 na GCF_000328265.2 PRJNA224116 SAMN01055196 ANQY00000000.1 na 1095701 487 Neisseria meningitidis NM422 strain=NM422 na latest Contig Major Full 2012-12-21 ASM32826v2 Institute for Genome Sciences GCA_000328265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/265/GCF_000328265.2_ASM32826v2/ na na na haploid bacteria 2293538 2293538 51.500000 0 32 32 NCBI RefSeq GCF_000328265.2-RS_2025_02_17 2025-02-17 2319 2021 92 na GCF_000328305.2 PRJNA224116 SAMN02469858 ANPE00000000.2 na 1246476 37928 Arthrobacter crystallopoietes BAB-32 strain=BAB-32 na latest Contig Major Full 2013-04-07 Arthrobacter crystallopoitesv3.1 Gujarat Genomics Initiative GCA_000328305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/305/GCF_000328305.2_Arthrobacter_crystallopoitesv3.1/ na na na haploid bacteria 4348607 4348607 66.500000 0 347 347 NCBI RefSeq GCF_000328305.2-RS_2025_08_24 2025-08-24 4330 4041 58 23833141 GCF_000328325.1 PRJNA224116 SAMN02469862 ANPF00000000.1 na 1246484 1246484 Halobacillus sp. BAB-2008 strain=BAB-2008 na latest Contig Major Full 2012-12-21 Halobacillus sp. BAB-2008v3.1 Gujarat Genomics Initiative GCA_000328325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/325/GCF_000328325.1_Halobacillus_sp._BAB-2008v3.1/ na na na haploid bacteria 3784751 3784751 47.000000 0 137 137 NCBI RefSeq GCF_000328325.1-RS_2024_05_23 2024-05-23 4068 3881 78 23469348 GCF_000328405.1 PRJNA224116 SAMN02604302 na na 1211705 670 Vibrio parahaemolyticus BB22OP strain=BB22OP na latest Complete Genome Major Full 2012-12-21 ASM32840v1 Virginia Tech GCA_000328405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/405/GCF_000328405.1_ASM32840v1/ na na na haploid bacteria 5103524 5103524 45.500000 2 2 2 NCBI RefSeq GCF_000328405.1-RS_2026_04_24 2026-04-24 4660 4457 164 23469330 GCF_000328475.2 PRJNA14007 SAMN02900459 AACP00000000.2 reference genome 5270 5270 Mycosarcoma maydis strain=521 na latest Chromosome Major Full 2015-02-18 Umaydis521_2.0 Broad Institute GCA_000328475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/475/GCF_000328475.2_Umaydis521_2.0/ na assembly designated as neotype na haploid fungi 19664356 19641656 54.000000 23 27 254 Broad Institute Annotation submitted by Broad Institute 2024-12-03 6907 6762 145 17080091 GCF_000328525.1 PRJNA224116 SAMN02232030 na reference genome 797302 387341 Halovivax ruber XH-70 strain=XH-70 na latest Complete Genome Major Full 2012-12-27 ASM32852v1 DOE Joint Genome Institute GCA_000328525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/525/GCF_000328525.1_ASM32852v1/ na assembly from type material na haploid archaea 3223876 3223876 64.500000 1 1 1 NCBI RefSeq GCF_000328525.1-RS_2025_11_20 2025-11-20 3166 3079 54 na GCF_000328545.1 PRJNA224116 SAMN02261387 na na 698948 1517 Thermoanaerobacterium thermosaccharolyticum M0795 strain=M0795 na latest Complete Genome Major Full 2012-12-27 ASM32854v1 JGI GCA_000328545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/545/GCF_000328545.1_ASM32854v1/ na na na haploid bacteria 2894276 2894276 33.500000 2 2 2 NCBI RefSeq GCF_000328545.1-RS_2026_06_10 2026-06-10 2913 2792 77 na GCF_000328565.1 PRJNA224116 SAMN02261384 na na 212767 212767 Mycobacterium sp. JS623 strain=JS623 na latest Complete Genome Major Full 2012-12-27 ASM32856v1 JGI GCA_000328565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/565/GCF_000328565.1_ASM32856v1/ na na na haploid bacteria 7221766 7221766 65.000000 4 4 4 NCBI RefSeq GCF_000328565.1-RS_2025_08_25 2025-08-25 7198 6951 55 na GCF_000328625.1 PRJNA224116 SAMN02261360 na reference genome 748449 42422 Halobacteroides halobius DSM 5150 strain=DSM 5150 na latest Complete Genome Major Full 2012-12-28 ASM32862v1 JGI GCA_000328625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/625/GCF_000328625.1_ASM32862v1/ na assembly from type material na haploid bacteria 2649255 2649255 32.500000 1 1 1 NCBI RefSeq GCF_000328625.1-RS_2026_05_02 2026-05-02 2630 2507 94 na GCF_000328665.1 PRJNA224116 SAMN02261367 na reference genome 867904 101192 Methanomethylovorans hollandica DSM 15978 strain=DSM 15978 na latest Complete Genome Major Full 2012-12-28 ASM32866v1 JGI GCA_000328665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/665/GCF_000328665.1_ASM32866v1/ na assembly from type material na haploid archaea 2714013 2714013 42.000000 2 2 2 NCBI RefSeq GCF_000328665.1-RS_2025_11_20 2025-11-20 2700 2604 60 na GCF_000328685.1 PRJNA224116 SAMN02261263 na reference genome 694430 29288 Natronococcus occultus SP4 strain=SP4 na latest Complete Genome Major Full 2012-12-28 ASM32868v1 JGI GCA_000328685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/685/GCF_000328685.1_ASM32868v1/ na assembly from type material na haploid archaea 4314118 4314118 64.500000 3 3 3 NCBI RefSeq GCF_000328685.1-RS_2025_11_20 2025-11-20 4372 4216 68 na GCF_000328705.1 PRJNA224116 SAMEA2272236 na reference genome 1179773 103731 Saccharothrix espanaensis DSM 44229 strain=type strain: DSM 44229 na latest Complete Genome Major Full 2012-10-02 ASM32870v1 CeBiTec, Technology Platform Genomics GCA_000328705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/705/GCF_000328705.1_ASM32870v1/ na assembly from type material na haploid bacteria 9360653 9360653 72.000000 1 1 1 NCBI RefSeq GCF_000328705.1-RS_2025_12_11 2025-12-11 8527 8315 72 22958348 GCF_000328725.1 PRJNA224116 SAMEA2272626 na reference genome 1246955 171284 Mycoplasmopsis cynos C142 strain=C142 na latest Complete Genome Major Full 2012-12-12 ASM32872v1 RVC GCA_000328725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/725/GCF_000328725.1_ASM32872v1/ na na na haploid bacteria 998123 998123 25.500000 1 1 1 NCBI RefSeq GCF_000328725.1-RS_2025_12_13 2025-12-13 817 770 40 na GCF_000328765.2 PRJNA224116 SAMEA2272437 na na 1209989 499229 Tepidanaerobacter acetatoxydans Re1 strain=Re1 na latest Complete Genome Major Full 2013-10-16 ASM32876v2 HGEN GCA_000328765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/765/GCF_000328765.2_ASM32876v2/ na assembly from type material na haploid bacteria 2761252 2761252 37.500000 1 1 1 NCBI RefSeq GCF_000328765.2-RS_2026_02_11 2026-02-11 2701 2569 62 23469343 GCF_000328785.1 PRJNA224116 SAMEA2271950 na na 1205674 78331 Mycobacterium canetti CIPT 140070010 strain=CIPT 140070010 STB-K latest Chromosome Major Full 2012-12-21 ASM32878v1 Genoscope CEA GCA_000328785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/785/GCF_000328785.1_ASM32878v1/ na na na haploid bacteria 4525948 4522969 65.500000 1 1 13 NCBI RefSeq GCF_000328785.1-RS_2026_01_27 2026-01-27 4230 3878 51 23291586 GCF_000328805.1 PRJNA224116 SAMEA2272709 na na 1205676 78331 Mycobacterium canetti CIPT 140060008 strain=CIPT 140060008 STB-D latest Chromosome Major Full 2012-12-21 ASM32880v1 Genoscope CEA GCA_000328805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/805/GCF_000328805.1_ASM32880v1/ na na na haploid bacteria 4432426 4431262 65.500000 1 1 13 NCBI RefSeq GCF_000328805.1-RS_2026_01_27 2026-01-27 4184 3896 51 23291586 GCF_000328825.1 PRJNA224116 SAMEA2272217 na na 1205677 78331 Mycobacterium canetti CIPT 140070017 strain=CIPT 140070017 STB-J latest Chromosome Major Full 2012-12-21 ASM32882v1 Genoscope CEA GCA_000328825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/825/GCF_000328825.1_ASM32882v1/ na na na haploid bacteria 4524466 4523466 65.500000 1 1 11 NCBI RefSeq GCF_000328825.1-RS_2026_01_27 2026-01-27 4244 3901 51 23291586 GCF_000328845.1 PRJNA224116 SAMEA2272599 na na 1205675 78331 Mycobacterium canetti CIPT 140070008 strain=CIPT 140070008 STB-L latest Chromosome Major Full 2012-12-21 ASM32884v1 Genoscope CEA GCA_000328845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/845/GCF_000328845.1_ASM32884v1/ na na na haploid bacteria 4420197 4419397 65.500000 1 1 9 NCBI RefSeq GCF_000328845.1-RS_2026_01_27 2026-01-27 4145 3859 51 23291586 GCF_000328865.1 PRJNA224116 SAMN02393725 AMGI00000000.1 na 1129368 2134 Spiroplasma melliferum IPMB4A strain=IPMB4A na latest Contig Major Full 2012-12-31 SMIPMB4A_v3 Academia Sinica GCA_000328865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/865/GCF_000328865.1_SMIPMB4A_v3/ na na na haploid bacteria 1098846 1098846 27.500000 0 24 24 NCBI RefSeq GCF_000328865.1-RS_2026_03_31 2026-03-31 1020 970 38 23324436 GCF_000328885.1 PRJNA224116 SAMN02469366 ANID00000000.1 na 1260282 158836 Enterobacter hormaechei YT3 strain=YT3 na latest Scaffold Major Full 2013-01-02 SOAPdenovo BGI Research Institution GCA_000328885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/885/GCF_000328885.1_SOAPdenovo/ na na na haploid bacteria 4809358 4809338 55.500000 0 12 14 NCBI RefSeq GCF_000328885.1-RS_2026_04_24 2026-04-24 4614 4466 102 na GCF_000328905.1 PRJNA224116 SAMN02469368 ANIA00000000.1 na 1259823 158836 Enterobacter hormaechei YT2 strain=YT2 na latest Scaffold Major Full 2013-01-02 ASM32890v1 BGI Research Institution GCA_000328905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/905/GCF_000328905.1_ASM32890v1/ na na na haploid bacteria 4802857 4802847 55.500000 0 14 15 NCBI RefSeq GCF_000328905.1-RS_2026_02_06 2026-02-06 4609 4453 105 na GCF_000328945.1 PRJNA224116 SAMN02469589 AJVI00000000.1 na 1027374 1027374 Nitrosopumilus sp. SJ strain=SJ na latest Contig Major Full 2012-12-31 NSJ Chungbuk National University GCA_000328945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/328/945/GCF_000328945.1_NSJ/ na na na haploid archaea 1650825 1650825 34.000000 0 15 15 NCBI RefSeq GCF_000328945.1-RS_2024_06_03 2024-06-03 2041 1979 47 na GCF_000329025.1 PRJNA224116 SAMN01041154 ALFF00000000.1 na 702979 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CHS44 strain=CHS44 na latest Contig Major Full 2012-12-31 ASM32902v1 FDA GCA_000329025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/025/GCF_000329025.1_ASM32902v1/ na na na haploid bacteria 4694572 4694572 52.000000 0 120 120 NCBI RefSeq GCF_000329025.1-RS_2025_05_21 2025-05-21 4685 4358 93 23383127 GCF_000329045.1 PRJNA224116 SAMN01041156 ALFG00000000.1 na 882872 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1882 strain=CDC_2010K_1882 na latest Contig Major Full 2012-12-31 ASM32904v1 FDA GCA_000329045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/045/GCF_000329045.1_ASM32904v1/ na na na haploid bacteria 4731526 4731526 52.000000 0 40 40 NCBI RefSeq GCF_000329045.1-RS_2025_05_16 2025-05-16 4656 4377 87 23383127 GCF_000329065.1 PRJNA224116 SAMN01041155 ALFH00000000.1 na 882873 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1884 strain=CDC_2010K_1884 na latest Contig Major Full 2012-12-31 ASM32906v1 FDA GCA_000329065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/065/GCF_000329065.1_ASM32906v1/ na na na haploid bacteria 4731019 4731019 52.000000 0 51 51 NCBI RefSeq GCF_000329065.1-RS_2025_05_16 2025-05-16 4664 4371 89 23383127 GCF_000329085.1 PRJNA224116 SAMN01041176 ALFI00000000.1 na 882874 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1594 strain=CDC_2010K_1594 na latest Contig Major Full 2012-12-31 ASM32908v1 FDA GCA_000329085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/085/GCF_000329085.1_ASM32908v1/ na na na haploid bacteria 4729878 4729878 52.000000 0 51 51 NCBI RefSeq GCF_000329085.1-RS_2025_05_16 2025-05-16 4657 4367 90 23383127 GCF_000329105.1 PRJNA224116 SAMN01041160 ALFJ00000000.1 na 882875 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1566 strain=CDC_2010K_1566 na latest Contig Major Full 2012-12-31 ASM32910v1 FDA GCA_000329105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/105/GCF_000329105.1_ASM32910v1/ na na na haploid bacteria 4690909 4690909 52.000000 0 42 42 NCBI RefSeq GCF_000329105.1-RS_2025_05_16 2025-05-16 4607 4329 82 23383127 GCF_000329125.1 PRJNA224116 SAMN01041162 ALFK00000000.1 na 882876 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1580 strain=CDC_2010K_1580 na latest Contig Major Full 2012-12-31 ASM32912v1 FDA GCA_000329125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/125/GCF_000329125.1_ASM32912v1/ na na na haploid bacteria 4692035 4692035 52.000000 0 37 37 NCBI RefSeq GCF_000329125.1-RS_2025_05_16 2025-05-16 4612 4328 89 23383127 GCF_000329145.1 PRJNA224116 SAMN01041149 ALFL00000000.1 na 882877 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1543 strain=CDC_2010K_1543 na latest Contig Major Full 2012-12-31 ASM32914v1 FDA GCA_000329145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/145/GCF_000329145.1_ASM32914v1/ na na na haploid bacteria 4691634 4691634 52.000000 0 37 37 NCBI RefSeq GCF_000329145.1-RS_2025_05_16 2025-05-16 4608 4327 90 23383127 GCF_000329165.1 PRJNA224116 SAMN01041150 ALFM00000000.1 na 882878 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1441 strain=CDC_2010K_1441 na latest Contig Major Full 2012-12-31 ASM32916v1 FDA GCA_000329165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/165/GCF_000329165.1_ASM32916v1/ na na na haploid bacteria 4694269 4694269 52.000000 0 40 40 NCBI RefSeq GCF_000329165.1-RS_2025_05_16 2025-05-16 4612 4318 91 23383127 GCF_000329185.1 PRJNA224116 SAMN01041185 ALFN00000000.1 na 882879 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1810 strain=CDC_2010K_1810 na latest Contig Major Full 2012-12-31 ASM32918v1 FDA GCA_000329185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/185/GCF_000329185.1_ASM32918v1/ na na na haploid bacteria 4729531 4729531 52.000000 0 60 60 NCBI RefSeq GCF_000329185.1-RS_2025_05_16 2025-05-16 4668 4375 89 23383127 GCF_000329205.1 PRJNA224116 SAMN01041157 ALFO00000000.1 na 885380 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1558 strain=CDC_2010K_1558 na latest Contig Major Full 2012-12-31 ASM32920v1 FDA GCA_000329205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/205/GCF_000329205.1_ASM32920v1/ na na na haploid bacteria 4733167 4733167 52.000000 0 40 40 NCBI RefSeq GCF_000329205.1-RS_2025_05_16 2025-05-16 4660 4379 90 23383127 GCF_000329225.1 PRJNA224116 SAMN01041164 ALFP00000000.1 na 885381 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1018 strain=CDC_2010K_1018 na latest Contig Major Full 2012-12-31 ASM32922v1 FDA GCA_000329225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/225/GCF_000329225.1_ASM32922v1/ na na na haploid bacteria 4693987 4693987 52.000000 0 35 35 NCBI RefSeq GCF_000329225.1-RS_2025_05_16 2025-05-16 4611 4333 87 23383127 GCF_000329245.1 PRJNA224116 SAMN01041165 ALFQ00000000.1 na 885382 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1010 strain=CDC_2010K_1010 na latest Contig Major Full 2012-12-31 ASM32924v1 FDA GCA_000329245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/245/GCF_000329245.1_ASM32924v1/ na na na haploid bacteria 4695225 4695225 52.000000 0 36 36 NCBI RefSeq GCF_000329245.1-RS_2025_05_16 2025-05-16 4618 4334 94 23383127 GCF_000329265.1 PRJNA224116 SAMN01041167 ALFR00000000.1 na 885383 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1729 strain=CDC_2010K_1729 na latest Contig Major Full 2012-12-31 ASM32926v1 FDA GCA_000329265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/265/GCF_000329265.1_ASM32926v1/ na na na haploid bacteria 4733964 4733964 52.000000 0 34 34 NCBI RefSeq GCF_000329265.1-RS_2025_05_16 2025-05-16 4663 4382 95 23383127 GCF_000329285.1 PRJNA224116 SAMN01041168 ALFS00000000.1 na 885384 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0895 strain=CDC_2010K_0895 na latest Contig Major Full 2012-12-31 ASM32928v1 FDA GCA_000329285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/285/GCF_000329285.1_ASM32928v1/ na na na haploid bacteria 4731669 4731669 52.000000 0 42 42 NCBI RefSeq GCF_000329285.1-RS_2025_05_16 2025-05-16 4656 4373 90 23383127 GCF_000329305.1 PRJNA224116 SAMN01041171 ALFT00000000.1 na 885385 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0899 strain=CDC_2010K_0899 na latest Contig Major Full 2012-12-31 ASM32930v1 FDA GCA_000329305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/305/GCF_000329305.1_ASM32930v1/ na na na haploid bacteria 4730776 4730776 52.000000 0 41 41 NCBI RefSeq GCF_000329305.1-RS_2025_05_16 2025-05-16 4661 4377 93 23383127 GCF_000329325.1 PRJNA224116 SAMN01041173 ALFU00000000.1 na 885386 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1457 strain=CDC_2010K_1457 na latest Contig Major Full 2012-12-31 ASM32932v1 FDA GCA_000329325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/325/GCF_000329325.1_ASM32932v1/ na na na haploid bacteria 4693937 4693937 52.000000 0 31 31 NCBI RefSeq GCF_000329325.1-RS_2025_05_18 2025-05-18 4620 4320 95 23383127 GCF_000329345.1 PRJNA224116 SAMN01041188 ALFV00000000.1 na 885387 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1747 strain=CDC_2010K_1747 na latest Contig Major Full 2012-12-31 ASM32934v1 FDA GCA_000329345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/345/GCF_000329345.1_ASM32934v1/ na na na haploid bacteria 4732226 4732226 52.000000 0 44 44 NCBI RefSeq GCF_000329345.1-RS_2025_05_16 2025-05-16 4659 4370 93 23383127 GCF_000329365.2 PRJNA224116 SAMN01041170 na na 886715 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 strain=CDC_2010K_0968 na latest Complete Genome Major Full 2014-04-04 ASM32936v2 FDA GCA_000329365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/365/GCF_000329365.2_ASM32936v2/ na na na haploid bacteria 4739031 4739031 52.000000 2 2 2 NCBI RefSeq GCF_000329365.2-RS_2025_05_22 2025-05-22 4639 4338 120 23383127 GCF_000329385.1 PRJNA224116 SAMN01041152 ALFX00000000.1 na 886716 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1444 strain=CDC_2010K_1444 na latest Contig Major Full 2012-12-31 ASM32938v1 FDA GCA_000329385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/385/GCF_000329385.1_ASM32938v1/ na na na haploid bacteria 4732008 4732008 52.000000 0 46 46 NCBI RefSeq GCF_000329385.1-RS_2025_05_16 2025-05-16 4654 4375 85 23383127 GCF_000329405.1 PRJNA224116 SAMN01041151 ALFY00000000.1 na 886717 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1445 strain=CDC_2010K_1445 na latest Contig Major Full 2012-12-31 ASM32940v1 FDA GCA_000329405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/405/GCF_000329405.1_ASM32940v1/ na na na haploid bacteria 4692672 4692672 52.000000 0 43 43 NCBI RefSeq GCF_000329405.1-RS_2025_05_18 2025-05-18 4608 4324 87 23383127 GCF_000329425.1 PRJNA224116 SAMN01041158 ALFZ00000000.1 na 886718 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1559 strain=CDC_2010K_1559 na latest Contig Major Full 2012-12-31 ASM32942v1 FDA GCA_000329425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/425/GCF_000329425.1_ASM32942v1/ na na na haploid bacteria 4725474 4725474 52.000000 0 65 65 NCBI RefSeq GCF_000329425.1-RS_2025_05_16 2025-05-16 4661 4360 86 23383127 GCF_000329445.1 PRJNA224116 SAMN01041159 ALGA00000000.1 na 886719 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1565 strain=CDC_2010K_1565 na latest Contig Major Full 2012-12-31 ASM32944v1 FDA GCA_000329445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/445/GCF_000329445.1_ASM32944v1/ na na na haploid bacteria 4689094 4689094 52.000000 0 64 64 NCBI RefSeq GCF_000329445.1-RS_2025_05_18 2025-05-18 4614 4312 86 23383127 GCF_000329465.1 PRJNA224116 SAMN01041184 ALGB00000000.1 na 886721 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1808 strain=CDC_2010K_1808 na latest Contig Major Full 2012-12-31 ASM32946v1 FDA GCA_000329465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/465/GCF_000329465.1_ASM32946v1/ na na na haploid bacteria 4731150 4731150 52.000000 0 65 65 NCBI RefSeq GCF_000329465.1-RS_2025_05_16 2025-05-16 4671 4362 91 23383127 GCF_000329485.1 PRJNA224116 SAMN01041186 ALGC00000000.1 na 886722 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1811 strain=CDC_2010K_1811 na latest Contig Major Full 2012-12-31 ASM32948v1 FDA GCA_000329485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/485/GCF_000329485.1_ASM32948v1/ na na na haploid bacteria 4730726 4730726 52.000000 0 57 57 NCBI RefSeq GCF_000329485.1-RS_2025_05_16 2025-05-16 4665 4374 91 23383127 GCF_000329505.1 PRJNA224116 SAMN01041169 ALGD00000000.1 na 886723 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0956 strain=CDC_2010K_0956 na latest Contig Major Full 2012-12-31 ASM32950v1 FDA GCA_000329505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/505/GCF_000329505.1_ASM32950v1/ na na na haploid bacteria 4731686 4731686 52.000000 0 59 59 NCBI RefSeq GCF_000329505.1-RS_2025_05_18 2025-05-18 4678 4382 91 23383127 GCF_000329525.1 PRJNA224116 SAMN01041172 ALGE00000000.1 na 886724 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1455 strain=CDC_2010K_1455 na latest Contig Major Full 2012-12-31 ASM32952v1 FDA GCA_000329525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/525/GCF_000329525.1_ASM32952v1/ na na na haploid bacteria 4695551 4695551 52.000000 0 44 44 NCBI RefSeq GCF_000329525.1-RS_2025_05_17 2025-05-17 4622 4334 95 23383127 GCF_000329545.1 PRJNA224116 SAMN01041161 ALGF00000000.1 na 886725 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1575 strain=CDC_2010K_1575 na latest Contig Major Full 2012-12-31 ASM32954v1 FDA GCA_000329545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/545/GCF_000329545.1_ASM32954v1/ na na na haploid bacteria 4690865 4690865 52.000000 0 51 51 NCBI RefSeq GCF_000329545.1-RS_2025_05_18 2025-05-18 4612 4325 90 23383127 GCF_000329565.1 PRJNA224116 SAMN01041166 ALGG00000000.1 na 886726 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1725 strain=CDC_2010K_1725 na latest Contig Major Full 2012-12-31 ASM32956v1 FDA GCA_000329565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/565/GCF_000329565.1_ASM32956v1/ na na na haploid bacteria 4735223 4735223 52.000000 0 41 41 NCBI RefSeq GCF_000329565.1-RS_2025_05_18 2025-05-18 4667 4378 96 23383127 GCF_000329585.1 PRJNA224116 SAMN01041187 ALGH00000000.1 na 886727 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1745 strain=CDC_2010K_1745 na latest Contig Major Full 2012-12-31 ASM32958v1 FDA GCA_000329585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/585/GCF_000329585.1_ASM32958v1/ na na na haploid bacteria 4730453 4730453 52.000000 0 53 53 NCBI RefSeq GCF_000329585.1-RS_2025_05_18 2025-05-18 4656 4370 84 23383127 GCF_000329605.1 PRJNA224116 SAMN01041182 ALGI00000000.1 na 886728 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1791 strain=CDC_2010K_1791 na latest Contig Major Full 2012-12-31 ASM32960v1 FDA GCA_000329605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/605/GCF_000329605.1_ASM32960v1/ na na na haploid bacteria 4693532 4693532 52.000000 0 40 40 NCBI RefSeq GCF_000329605.1-RS_2025_05_18 2025-05-18 4617 4326 94 23383127 GCF_000329625.1 PRJNA224116 SAMN01041183 ALGJ00000000.1 na 886720 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1795 strain=CDC_2010K_1795 na latest Contig Major Full 2012-12-31 ASM32962v1 FDA GCA_000329625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/625/GCF_000329625.1_ASM32962v1/ na na na haploid bacteria 4689856 4689856 52.000000 0 47 47 NCBI RefSeq GCF_000329625.1-RS_2025_05_17 2025-05-17 4607 4312 86 23383127 GCF_000329645.1 PRJNA224116 SAMN01041103 ALGK00000000.1 na 887063 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 576709 strain=576709 na latest Contig Major Full 2012-12-31 ASM32964v1 FDA GCA_000329645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/645/GCF_000329645.1_ASM32964v1/ na na na haploid bacteria 4733778 4733778 52.000000 0 63 63 NCBI RefSeq GCF_000329645.1-RS_2025_05_18 2025-05-18 4673 4390 85 23383127 GCF_000329665.1 PRJNA224116 SAMN01041118 ALGL00000000.1 na 887067 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 635290-58 strain=635290-58 na latest Contig Major Full 2012-12-31 ASM32966v1 FDA GCA_000329665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/665/GCF_000329665.1_ASM32966v1/ na na na haploid bacteria 4687632 4687632 52.000000 0 78 78 NCBI RefSeq GCF_000329665.1-RS_2025_05_18 2025-05-18 4625 4320 84 23383127 GCF_000329685.1 PRJNA224116 SAMN01041110 ALGM00000000.1 na 887068 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-16 strain=607308-16 na latest Contig Major Full 2012-12-31 ASM32968v1 FDA GCA_000329685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/685/GCF_000329685.1_ASM32968v1/ na na na haploid bacteria 4719434 4719434 52.000000 0 110 110 NCBI RefSeq GCF_000329685.1-RS_2025_05_18 2025-05-18 4674 4341 77 23383127 GCF_000329705.1 PRJNA224116 SAMN01041111 ALGN00000000.1 na 887069 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-19 strain=607308-19 na latest Contig Major Full 2012-12-31 ASM32970v1 FDA GCA_000329705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/705/GCF_000329705.1_ASM32970v1/ na na na haploid bacteria 4727640 4727640 52.000000 0 60 60 NCBI RefSeq GCF_000329705.1-RS_2025_05_18 2025-05-18 4660 4357 83 23383127 GCF_000329725.1 PRJNA224116 SAMN01041108 ALGO00000000.1 na 887070 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 607307-2 strain=607307-2 na latest Contig Major Full 2012-12-31 ASM32972v1 FDA GCA_000329725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/725/GCF_000329725.1_ASM32972v1/ na na na haploid bacteria 4724126 4724126 52.000000 0 56 56 NCBI RefSeq GCF_000329725.1-RS_2025_05_23 2025-05-23 4658 4359 83 23383127 GCF_000329745.1 PRJNA224116 SAMN01041112 ALGP00000000.1 na 891412 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-9 strain=607308-9 na latest Contig Major Full 2012-12-31 ASM32974v1 FDA GCA_000329745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/745/GCF_000329745.1_ASM32974v1/ na na na haploid bacteria 4729039 4729039 52.000000 0 57 57 NCBI RefSeq GCF_000329745.1-RS_2025_05_17 2025-05-17 4658 4371 83 23383127 GCF_000329765.1 PRJNA224116 SAMN01041115 ALGQ00000000.1 na 891414 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 629163 strain=629163 na latest Contig Major Full 2012-12-31 ASM32976v1 FDA GCA_000329765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/765/GCF_000329765.1_ASM32976v1/ na na na haploid bacteria 4724696 4724696 52.000000 0 65 65 NCBI RefSeq GCF_000329765.1-RS_2025_05_18 2025-05-18 4666 4354 89 23383127 GCF_000329785.1 PRJNA224116 SAMN01041178 ALGR00000000.1 na 925126 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. SE15-1 strain=SE15-1 na latest Contig Major Full 2012-12-31 ASM32978v1 FDA GCA_000329785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/785/GCF_000329785.1_ASM32978v1/ na na na haploid bacteria 4692361 4692361 52.000000 0 65 65 NCBI RefSeq GCF_000329785.1-RS_2025_05_17 2025-05-17 4619 4315 91 23383127 GCF_000329805.1 PRJNA224116 SAMN01041163 ALGS00000000.1 na 925127 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_N202 strain=CVM_N202 na latest Contig Major Full 2012-12-31 ASM32980v1 FDA GCA_000329805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/805/GCF_000329805.1_ASM32980v1/ na na na haploid bacteria 4695360 4695360 52.000000 0 44 44 NCBI RefSeq GCF_000329805.1-RS_2025_05_17 2025-05-17 4617 4312 89 23383127 GCF_000329825.1 PRJNA224116 SAMN01041100 ALGT00000000.1 na 925128 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_56-3991 strain=CVM_56-3991 na latest Contig Major Full 2012-12-31 ASM32982v1 FDA GCA_000329825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/825/GCF_000329825.1_ASM32982v1/ na na na haploid bacteria 4696150 4696150 52.000000 0 51 51 NCBI RefSeq GCF_000329825.1-RS_2025_05_18 2025-05-18 4622 4322 87 23383127 GCF_000329845.1 PRJNA224116 SAMN01041141 ALGU00000000.1 na 925129 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_76-3618 strain=CVM_76-3618 na latest Contig Major Full 2012-12-31 ASM32984v1 FDA GCA_000329845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/845/GCF_000329845.1_ASM32984v1/ na na na haploid bacteria 4684363 4684363 52.000000 0 104 104 NCBI RefSeq GCF_000329845.1-RS_2025_05_17 2025-05-17 4640 4287 84 23383127 GCF_000329885.1 PRJNA224116 SAMN01041146 ALGW00000000.1 na 925131 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_81-2490 strain=CVM_81-2490 na latest Contig Major Full 2012-12-31 ASM32988v1 FDA GCA_000329885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/885/GCF_000329885.1_ASM32988v1/ na na na haploid bacteria 4684921 4684921 52.000000 0 63 63 NCBI RefSeq GCF_000329885.1-RS_2026_01_07 2026-01-07 4614 4325 84 23383127 GCF_000329905.1 PRJNA224116 SAMN01041180 ALGX00000000.1 na 925132 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. SL909 strain=SL909 na latest Contig Major Full 2012-12-31 ASM32990v1 FDA GCA_000329905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/905/GCF_000329905.1_ASM32990v1/ na na na haploid bacteria 4720827 4720827 52.000000 0 65 65 NCBI RefSeq GCF_000329905.1-RS_2026_01_07 2026-01-07 4654 4364 80 23383127 GCF_000329925.1 PRJNA224116 SAMN01041181 ALGY00000000.1 na 925133 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. SL913 strain=SL913 na latest Contig Major Full 2012-12-31 ASM32992v1 FDA GCA_000329925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/925/GCF_000329925.1_ASM32992v1/ na na na haploid bacteria 4691156 4691156 52.000000 0 56 56 NCBI RefSeq GCF_000329925.1-RS_2026_01_07 2026-01-07 4618 4331 85 23383127 GCF_000329945.1 PRJNA224116 SAMN01041139 ALGZ00000000.1 na 930768 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_69-4941 strain=CVM_69-4941 na latest Contig Major Full 2012-12-31 ASM32994v1 FDA GCA_000329945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/945/GCF_000329945.1_ASM32994v1/ na na na haploid bacteria 4692723 4692723 52.000000 0 69 69 NCBI RefSeq GCF_000329945.1-RS_2025_05_17 2025-05-17 4632 4319 91 23383127 GCF_000329965.1 PRJNA224116 SAMN01041119 ALHA00000000.1 na 938147 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 638970-15 strain=638970-15 na latest Contig Major Full 2012-12-31 ASM32996v1 FDA GCA_000329965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/965/GCF_000329965.1_ASM32996v1/ na na na haploid bacteria 4726557 4726557 52.000000 0 82 82 NCBI RefSeq GCF_000329965.1-RS_2025_05_17 2025-05-17 4675 4343 90 23383127 GCF_000329985.1 PRJNA224116 SAMN01041084 ALHB00000000.1 na 984212 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 17927 strain=17927 na latest Contig Major Full 2012-12-31 ASM32998v1 FDA GCA_000329985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/329/985/GCF_000329985.1_ASM32998v1/ na na na haploid bacteria 4687875 4687875 52.000000 0 91 91 NCBI RefSeq GCF_000329985.1-RS_2025_05_17 2025-05-17 4642 4305 94 23383127 GCF_000330005.1 PRJNA224116 SAMN01041153 ALHC00000000.1 na 984213 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. CHS4 strain=CHS4 na latest Contig Major Full 2012-12-31 ASM33000v1 FDA GCA_000330005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/005/GCF_000330005.1_ASM33000v1/ na na na haploid bacteria 4685804 4685804 52.000000 0 65 65 NCBI RefSeq GCF_000330005.1-RS_2025_05_17 2025-05-17 4628 4326 88 23383127 GCF_000330045.1 PRJNA224116 SAMN01041097 ALHE00000000.1 na 984215 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 22-17 strain=543463 22-17 na latest Contig Major Full 2012-12-31 ASM33004v1 FDA GCA_000330045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/045/GCF_000330045.1_ASM33004v1/ na na na haploid bacteria 4708384 4708384 52.000000 0 116 116 NCBI RefSeq GCF_000330045.1-RS_2025_05_17 2025-05-17 4670 4295 87 23383127 GCF_000330065.1 PRJNA224116 SAMN01041098 ALHF00000000.1 na 984216 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 40-18 strain=543463 40-18 na latest Contig Major Full 2012-12-31 ASM33006v1 FDA GCA_000330065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/065/GCF_000330065.1_ASM33006v1/ na na na haploid bacteria 4701328 4701328 52.000000 0 122 122 NCBI RefSeq GCF_000330065.1-RS_2025_05_17 2025-05-17 4673 4264 83 23383127 GCF_000330085.1 PRJNA224116 SAMN01041101 ALHG00000000.1 na 984217 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 561362 1-1 strain=561362 1-1 na latest Contig Major Full 2012-12-31 ASM33008v1 FDA GCA_000330085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/085/GCF_000330085.1_ASM33008v1/ na na na haploid bacteria 4717673 4717673 52.000000 0 79 79 NCBI RefSeq GCF_000330085.1-RS_2025_05_17 2025-05-17 4669 4331 95 23383127 GCF_000330105.1 PRJNA224116 SAMN01041124 ALHH00000000.1 na 984218 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 4-1 strain=642044 4-1 na latest Contig Major Full 2012-12-31 ASM33010v1 FDA GCA_000330105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/105/GCF_000330105.1_ASM33010v1/ na na na haploid bacteria 4717036 4717036 52.000000 0 86 86 NCBI RefSeq GCF_000330105.1-RS_2025_05_17 2025-05-17 4667 4326 90 23383127 GCF_000330125.1 PRJNA224116 SAMN01041126 ALHI00000000.1 na 984219 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 642046 4-7 strain=642046 4-7 na latest Contig Major Full 2012-12-31 ASM33012v1 FDA GCA_000330125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/125/GCF_000330125.1_ASM33012v1/ na na na haploid bacteria 4668954 4668954 52.000000 0 100 100 NCBI RefSeq GCF_000330125.1-RS_2025_05_17 2025-05-17 4618 4247 92 23383127 GCF_000330145.1 PRJNA224116 SAMN01041127 ALHJ00000000.1 na 984220 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648898 4-5 strain=648898 4-5 na latest Contig Major Full 2012-12-31 ASM33014v1 FDA GCA_000330145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/145/GCF_000330145.1_ASM33014v1/ na na na haploid bacteria 4710555 4710555 52.000000 0 126 126 NCBI RefSeq GCF_000330145.1-RS_2025_05_17 2025-05-17 4675 4280 86 23383127 GCF_000330165.1 PRJNA224116 SAMN01041128 ALHK00000000.1 na 984221 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648899 3-17 strain=648899 3-17 na latest Contig Major Full 2012-12-31 ASM33016v1 FDA GCA_000330165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/165/GCF_000330165.1_ASM33016v1/ na na na haploid bacteria 4685865 4685865 52.000000 0 193 193 NCBI RefSeq GCF_000330165.1-RS_2025_05_17 2025-05-17 4706 4260 95 23383127 GCF_000330185.1 PRJNA224116 SAMN01041129 ALHL00000000.1 na 984222 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648900 1-16 strain=648900 1-16 na latest Contig Major Full 2012-12-31 ASM33018v1 FDA GCA_000330185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/185/GCF_000330185.1_ASM33018v1/ na na na haploid bacteria 4746502 4746502 52.000000 0 124 124 NCBI RefSeq GCF_000330185.1-RS_2025_05_17 2025-05-17 4729 4372 91 23383127 GCF_000330205.1 PRJNA224116 SAMN01041130 ALHM00000000.1 na 984223 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 1-17 strain=648901 1-17 na latest Contig Major Full 2012-12-31 ASM33020v1 FDA GCA_000330205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/205/GCF_000330205.1_ASM33020v1/ na na na haploid bacteria 4717778 4717778 52.000000 0 93 93 NCBI RefSeq GCF_000330205.1-RS_2025_05_17 2025-05-17 4671 4330 86 23383127 GCF_000330245.1 PRJNA224116 SAMN01041134 ALHO00000000.1 na 984225 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648902 6-8 strain=648902 6-8 na latest Contig Major Full 2012-12-31 ASM33024v1 FDA GCA_000330245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/245/GCF_000330245.1_ASM33024v1/ na na na haploid bacteria 4719675 4719675 52.000000 0 74 74 NCBI RefSeq GCF_000330245.1-RS_2025_05_17 2025-05-17 4672 4309 92 23383127 GCF_000330265.1 PRJNA224116 SAMN01041135 ALHP00000000.1 na 984226 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648903 1-6 strain=648903 1-6 na latest Contig Major Full 2012-12-31 ASM33026v1 FDA GCA_000330265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/265/GCF_000330265.1_ASM33026v1/ na na na haploid bacteria 4710923 4710923 52.000000 0 102 102 NCBI RefSeq GCF_000330265.1-RS_2025_05_17 2025-05-17 4681 4308 89 23383127 GCF_000330285.1 PRJNA224116 SAMN01041136 ALHQ00000000.1 na 984227 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 648904 3-6 strain=648904 3-6 na latest Contig Major Full 2012-12-31 ASM33028v1 FDA GCA_000330285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/285/GCF_000330285.1_ASM33028v1/ na na na haploid bacteria 4714864 4714864 52.000000 0 261 261 NCBI RefSeq GCF_000330285.1-RS_2026_05_17 2026-05-17 4815 4365 85 23383127 GCF_000330305.1 PRJNA224116 SAMN01041138 ALHR00000000.1 na 984229 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 653049 13-19 strain=653049 13-19 na latest Contig Major Full 2012-12-31 ASM33030v1 FDA GCA_000330305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/305/GCF_000330305.1_ASM33030v1/ na na na haploid bacteria 4732860 4732860 52.000000 0 74 74 NCBI RefSeq GCF_000330305.1-RS_2025_05_17 2025-05-17 4687 4334 100 23383127 GCF_000330345.1 PRJNA224116 SAMN01041102 ALHT00000000.1 na 984232 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 561362 9-7 strain=561362 9-7 na latest Contig Major Full 2012-12-31 ASM33034v1 FDA GCA_000330345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/345/GCF_000330345.1_ASM33034v1/ na na na haploid bacteria 4694482 4694482 52.000000 0 91 91 NCBI RefSeq GCF_000330345.1-RS_2025_05_17 2025-05-17 4656 4271 95 23383127 GCF_000330365.1 PRJNA224116 SAMN01041099 ALHU00000000.1 na 984233 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 42-20 strain=543463 42-20 na latest Contig Major Full 2012-12-31 ASM33036v1 FDA GCA_000330365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/365/GCF_000330365.1_ASM33036v1/ na na na haploid bacteria 4751509 4751509 52.000000 0 142 142 NCBI RefSeq GCF_000330365.1-RS_2025_05_17 2025-05-17 4763 4353 93 23383127 GCF_000330425.1 PRJNA224116 SAMN01041091 ALHX00000000.1 na 997329 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 33944 strain=33944 na latest Contig Major Full 2012-12-31 ASM33042v1 FDA GCA_000330425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/425/GCF_000330425.1_ASM33042v1/ na na na haploid bacteria 4725355 4725355 52.000000 0 103 103 NCBI RefSeq GCF_000330425.1-RS_2025_05_17 2025-05-17 4697 4286 85 23383127 GCF_000330465.1 PRJNA224116 SAMN01041147 ALIB00000000.1 na 1079475 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 81-2625 strain=81-2625 na latest Contig Major Full 2012-12-31 ASM33046v1 FDA GCA_000330465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/465/GCF_000330465.1_ASM33046v1/ na na na haploid bacteria 4695483 4695483 52.000000 0 110 110 NCBI RefSeq GCF_000330465.1-RS_2025_05_16 2025-05-16 4662 4303 88 23383127 GCF_000330485.2 PRJNA224116 SAMN01805317 na na 1029979 28901 Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 strain=ATCC 9120 na latest Complete Genome Major Full 2015-08-12 ASM33048v2 FDA GCA_000330485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/485/GCF_000330485.2_ASM33048v2/ na na na haploid bacteria 4781492 4781492 52.000000 2 2 2 NCBI RefSeq GCF_000330485.2-RS_2025_05_09 2025-05-09 4678 4202 116 26798102 GCF_000330565.1 PRJNA224116 SAMN01041113 ALIC00000000.1 na 1079476 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 62-1976 strain=62-1976 na latest Contig Major Full 2012-12-31 ASM33056v1 FDA GCA_000330565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/565/GCF_000330565.1_ASM33056v1/ na na na haploid bacteria 4693707 4693707 52.000000 0 57 57 NCBI RefSeq GCF_000330565.1-RS_2025_05_16 2025-05-16 4622 4320 80 23383127 GCF_000330585.1 PRJNA224116 SAMN01041096 ALID00000000.1 na 1116477 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 53-407 strain=53-407 na latest Contig Major Full 2012-12-31 ASM33058v1 FDA GCA_000330585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/585/GCF_000330585.1_ASM33058v1/ na na na haploid bacteria 4658850 4658850 52.000000 0 62 62 NCBI RefSeq GCF_000330585.1-RS_2025_05_16 2025-05-16 4590 4286 86 23383127 GCF_000330605.1 PRJNA224116 SAMEA3138430 CAOV00000000.1 na 1243181 630 Yersinia enterocolitica IP 10393 strain=IP 10393 na latest Contig Major Full 2012-12-19 ASM33060v1 Institut Pasteur GCA_000330605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/605/GCF_000330605.1_ASM33060v1/ na na na haploid bacteria 4463212 4463212 47.000000 0 12 12 NCBI RefSeq GCF_000330605.1-RS_2025_12_21 2025-12-21 4052 3794 78 23469338 GCF_000330625.1 PRJNA224116 SAMN02415259 ANOT00000000.1 na 1262652 28901 Salmonella enterica subsp. enterica serovar Agona str. SH08SF124 strain=SH08SF124 na latest Contig Major Full 2013-01-02 ASM33062v1 University of Maryland, College Park GCA_000330625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/625/GCF_000330625.1_ASM33062v1/ na na na haploid bacteria 4889048 4889048 52.000000 0 62 62 NCBI RefSeq GCF_000330625.1-RS_2025_01_06 2025-01-06 4837 4571 107 23469342 GCF_000330645.1 PRJNA224116 SAMN02415260 ANOU00000000.1 na 1262654 28901 Salmonella enterica subsp. enterica serovar Agona str. SH10GFN094 strain=SH10GFN094 na latest Contig Major Full 2013-01-02 ASM33064v1 University of Maryland, College Park GCA_000330645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/645/GCF_000330645.1_ASM33064v1/ na na na haploid bacteria 4811275 4811275 52.000000 0 66 66 NCBI RefSeq GCF_000330645.1-RS_2025_06_03 2025-06-03 4682 4421 108 23469342 GCF_000330665.1 PRJNA224116 SAMN02415258 ANOS00000000.1 na 1263410 28901 Salmonella enterica subsp. enterica serovar Agona str. SH11G1113 strain=SH11G1113 na latest Contig Major Full 2013-01-02 ASM33066v1 University of Maryland, College Park GCA_000330665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/665/GCF_000330665.1_ASM33066v1/ na na na haploid bacteria 4856197 4856197 52.000000 0 78 78 NCBI RefSeq GCF_000330665.1-RS_2025_01_06 2025-01-06 4755 4501 99 23469342 GCF_000330685.1 PRJNA224116 SAMN00116856 AMPF00000000.1 na 904753 1280 Staphylococcus aureus subsp. aureus 21282 strain=21282 na latest Contig Major Full 2013-01-02 Saureus21282v1.0 J. Craig Venter Institute GCA_000330685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/685/GCF_000330685.1_Saureus21282v1.0/ na na na haploid bacteria 2826226 2826226 32.500000 0 95 95 NCBI RefSeq GCF_000330685.1-RS_2025_03_19 2025-03-19 2915 2770 64 na GCF_000330705.1 PRJNA224116 SAMN02470212 ANAM00000000.1 reference genome 1235755 558170 Salinicoccus carnicancri Crm strain=Crm na latest Contig Major Full 2013-01-02 Crm Kyung Hee University GCA_000330705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/705/GCF_000330705.1_Crm/ na assembly from type material na haploid bacteria 2669034 2669034 48.000000 0 12 12 NCBI RefSeq GCF_000330705.1-RS_2026_05_02 2026-05-02 2754 2663 74 na GCF_000330725.2 PRJNA224116 SAMN02469987 AMZY00000000.2 reference genome 1239962 1245591 Mariniradius saccharolyticus AK6 strain=AK6 na latest Contig Major Full 2013-04-02 ASM33072v2 Institute of Microbial Technology GCA_000330725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/725/GCF_000330725.2_ASM33072v2/ na assembly from type material na haploid bacteria 4854424 4854424 46.500000 0 39 39 NCBI RefSeq GCF_000330725.2-RS_2026_05_02 2026-05-02 4140 4082 48 na GCF_000330745.1 PRJNA224116 SAMN02261084 AMWG00000000.1 na 993516 265606 Rhodopirellula baltica SWK14 strain=SWK14 na latest Contig Major Full 2013-01-02 ASM33074v1 MIMAS GCA_000330745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/745/GCF_000330745.1_ASM33074v1/ na na na haploid bacteria 7488930 7488930 55.500000 0 189 189 NCBI RefSeq GCF_000330745.1-RS_2025_12_02 2025-12-02 5594 5460 73 23273849 GCF_000330805.1 PRJNA224116 SAMN02471000 AMQI00000000.1 na 1198291 1390 Bacillus amyloliquefaciens DC-12 strain=DC-12 na latest Scaffold Major Full 2013-01-15 ASM33080v1 School of Bioscience and Bioengineering, South China University of Technology, Guangzhou GCA_000330805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/805/GCF_000330805.1_ASM33080v1/ na na na haploid bacteria 4016564 4011743 46.000000 0 18 45 NCBI RefSeq GCF_000330805.1-RS_2026_01_30 2026-01-30 4119 3948 74 na GCF_000330825.2 PRJNA224116 SAMN02470202 AMYL00000000.1 na 1241616 1280 Staphylococcus aureus subsp. aureus DSM 20231 strain=DSM 20231 na latest Contig Minor Full 2013-01-02 SASA1.0 Korea University GCA_000330825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/825/GCF_000330825.2_SASA1.0/ na assembly from type material na haploid bacteria 2756322 2756322 33.000000 0 16 16 NCBI RefSeq GCF_000330825.2-RS_2025_02_15 2025-02-15 2750 2618 72 24628867 GCF_000330865.1 PRJNA224116 SAMN02604288 na na 671990 671990 Serratia sp. FGI94 strain=FGI94 na latest Complete Genome Major Full 2013-01-03 ASM33086v1 UW-Madison GCA_000330865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/865/GCF_000330865.1_ASM33086v1/ na na na haploid bacteria 4858216 4858216 59.000000 1 1 1 NCBI RefSeq GCF_000330865.1-RS_2024_05_07 2024-05-07 4592 4421 116 23516234 GCF_000330885.1 PRJNA224116 SAMN02604105 na reference genome 698761 398 Rhizobium tropici CIAT 899 strain=CIAT 899 na latest Complete Genome Major Full 2013-01-03 ASM33088v1 Universidad Nacional Autonoma de Mexico GCA_000330885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/885/GCF_000330885.1_ASM33088v1/ na assembly from type material na haploid bacteria 6686334 6686334 59.500000 4 4 4 NCBI RefSeq GCF_000330885.1-RS_2026_04_23 2026-04-23 6391 6160 67 23270491 GCF_000330905.1 PRJNA224116 SAMN02470062 AMVL00000000.1 na 1236549 666 Vibrio cholerae 4260B strain=4260B na latest Contig Major Full 2013-01-03 VC4260B International Vaccine Institute GCA_000330905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/905/GCF_000330905.1_VC4260B/ na na na haploid bacteria 4039222 4039222 47.500000 0 40 40 NCBI RefSeq GCF_000330905.1-RS_2026_02_17 2026-02-17 3675 3545 83 na GCF_000330925.1 PRJNA224116 SAMN02469974 ANKQ00000000.1 na 1134457 1126 Microcystis aeruginosa TAIHU98 strain=TAIHU98 na latest Contig Major Full 2013-01-03 MicAerT1.0 Institute of Hydrobiology, Chinese Academy of Sciences GCA_000330925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/925/GCF_000330925.1_MicAerT1.0/ na na na haploid bacteria 4849611 4849611 42.500000 0 4 4 NCBI RefSeq GCF_000330925.1-RS_2025_04_26 2025-04-26 4714 4319 52 23766403 GCF_000330945.1 PRJNA224116 SAMN02469956 ANZB00000000.1 na 1262449 1501 Clostridium pasteurianum DSM 525 = ATCC 6013 strain=DSM 525 na latest Contig Major Full 2013-01-03 Cpasteurianum_V1 Institute of Bioprocess and Biosystems Engineering GCA_000330945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/330/945/GCF_000330945.1_Cpasteurianum_V1/ na assembly from type material na haploid bacteria 4285687 4285687 30.000000 0 37 37 NCBI RefSeq GCF_000330945.1-RS_2026_04_07 2026-04-07 4080 3925 83 23469350 GCF_000331005.1 PRJNA224116 SAMN02436476 AEJB00000000.1 na 698760 85558 Streptomyces turgidiscabies Car8 strain=Car8 na latest Contig Major Full 2013-01-03 Sturgcar8v1.0 JCVI GCA_000331005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/005/GCF_000331005.1_Sturgcar8v1.0/ na na na haploid bacteria 10825282 10825282 70.000000 0 692 692 NCBI RefSeq GCF_000331005.1-RS_2026_04_04 2026-04-04 9954 9459 100 21087627 GCF_000331025.1 PRJNA224116 SAMEA2272440 na reference genome 1121451 191026 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 strain=AM13 = DSM 14728 na latest Chromosome Major Full 2012-12-21 ASM33102v1 Genoscope CEA GCA_000331025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/025/GCF_000331025.1_ASM33102v1/ na assembly from type material na haploid bacteria 3708362 3708262 45.000000 2 2 3 NCBI RefSeq GCF_000331025.1-RS_2026_05_02 2026-05-02 3343 3223 98 na GCF_000331065.1 PRJNA224116 SAMN02603213 na reference genome 1240471 251542 Candidatus Blochmanniella chromaiodes str. 640 strain=640 na latest Complete Genome Major Full 2013-01-04 ASM33106v1 Duke University GCA_000331065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/065/GCF_000331065.1_ASM33106v1/ na na na haploid bacteria 791219 791219 29.500000 1 1 1 NCBI RefSeq GCF_000331065.1-RS_2026_03_17 2026-03-17 661 609 46 23475937 GCF_000331085.3 PRJNA224116 SAMN02604130 na na 1238993 2104 Mycoplasmoides pneumoniae M129-B7 strain=M129-B7 na latest Complete Genome Minor Full 2015-03-03 ASM33108v2 University of Alabama at Birmingham GCA_000331085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/085/GCF_000331085.3_ASM33108v2/ na na na haploid bacteria 816451 816451 40.000000 1 1 1 NCBI RefSeq GCF_000331085.3-RS_2026_02_28 2026-02-28 762 675 43 23412845;26275904 GCF_000331105.1 PRJNA224116 SAMEA2272250 na reference genome 1166018 651143 Fibrella aestuarina BUZ 2 strain=BUZ 2 na latest Chromosome Major Full 2012-04-11 ASM33110v1 Center for Biotechnology, Bielefeld University GCA_000331105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/105/GCF_000331105.1_ASM33110v1/ na assembly from type material na haploid bacteria 6937263 6929158 56.500000 2 2 13 NCBI RefSeq GCF_000331105.1-RS_2025_09_16 2025-09-16 5812 5722 82 22689241 GCF_000331165.2 PRJNA224116 SAMN02472105 na na 1214915 1772 Mycolicibacterium smegmatis MKD8 strain=MKD8 na latest Complete Genome Major Full 2018-06-12 ASM33116v2 Wadsworth Center, New York State Dept of Health GCA_000331165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/165/GCF_000331165.2_ASM33116v2/ na na na haploid bacteria 7119169 7119169 67.500000 1 1 1 NCBI RefSeq GCF_000331165.2-RS_2026_02_18 2026-02-18 6835 6670 57 23618714 GCF_000331185.2 PRJNA224116 SAMN02471950 na reference genome 1265868 1927 Streptomyces rimosus subsp. rimosus ATCC 10970 strain=ATCC 10970 na latest Complete Genome Major Full 2021-03-19 ASM33118v2 University of Strathclyde GCA_000331185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/185/GCF_000331185.2_ASM33118v2/ na assembly from type material na haploid bacteria 9643891 9643891 72.000000 2 2 2 NCBI RefSeq GCF_000331185.2-RS_2026_04_16 2026-04-16 8510 8250 92 na GCF_000331225.1 PRJNA224116 SAMN02470018 ANFY00000000.1 na 1248916 1248916 Sandarakinorhabdus sp. AAP62 strain=AAP62 na latest Contig Major Full 2013-01-09 SanAAP62ver1.0 Institute of Microbiology, ASCR GCA_000331225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/225/GCF_000331225.1_SanAAP62ver1.0/ na na na haploid bacteria 3131544 3131544 65.500000 0 22 22 NCBI RefSeq GCF_000331225.1-RS_2024_05_29 2024-05-29 2981 2920 50 23469335 GCF_000331245.1 PRJNA224116 SAMN02470020 ANFZ00000000.1 na 1248760 1248760 Blastomonas sp. AAP53 strain=AAP53 na latest Contig Major Full 2013-01-09 BlaAAP53ver1.0 Institute of Microbiology, ASCR GCA_000331245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/245/GCF_000331245.1_BlaAAP53ver1.0/ na na na haploid bacteria 3616216 3616216 63.500000 0 28 28 NCBI RefSeq GCF_000331245.1-RS_2024_05_07 2024-05-07 3417 3351 49 23516202 GCF_000331285.1 PRJNA224116 SAMN02470019 ANFX00000000.1 na 1248917 1248917 Porphyrobacter sp. AAP82 strain=AAP82 na latest Scaffold Major Full 2013-01-09 PorAAP82ver1.0 Institute of Microbiology, ASCR GCA_000331285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/285/GCF_000331285.1_PorAAP82ver1.0/ na na na haploid bacteria 2899072 2899062 67.500000 0 52 53 NCBI RefSeq GCF_000331285.1-RS_2025_03_25 2025-03-25 2865 2783 51 na GCF_000331385.1 PRJNA224116 SAMN02472031 ANZF00000000.1 na 1260626 317 Pseudomonas syringae pv. syringae B64 strain=B64 na latest Chromosome Major Full 2013-01-18 PSSB64v1.0 Institute of Plant Biology, University of Zurich GCA_000331385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/385/GCF_000331385.1_PSSB64v1.0/ na na na haploid bacteria 5930035 5873298 59.000000 1 1 42 NCBI RefSeq GCF_000331385.1-RS_2026_01_15 2026-01-15 5141 4947 78 24501627 GCF_000331445.1 PRJNA224116 SAMEA2272730 na na 1138877 1773 Mycobacterium tuberculosis 7199-99 strain=7199-99 na latest Complete Genome Major Full 2013-01-08 ASM33144v1 Center for Biotechnology, Bielefeld University GCA_000331445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/445/GCF_000331445.1_ASM33144v1/ na na na haploid bacteria 4421197 4421197 65.500000 1 1 1 NCBI RefSeq GCF_000331445.1-RS_2025_05_23 2025-05-23 4162 3925 51 23424287 GCF_000331515.1 PRJNA224116 SAMN02469996 AMZO00000000.1 reference genome 1056511 1056511 Photobacterium marinum strain=AK15 na latest Contig Major Full 2013-01-11 Photobacterium marinum AK15 Institute of Microbial Technology GCA_000331515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/515/GCF_000331515.1_Photobacterium_marinum_AK15/ na assembly from type material na haploid bacteria 5536962 5536962 46.000000 0 83 83 NCBI RefSeq GCF_000331515.1-RS_2025_12_13 2025-12-13 4903 4786 70 na GCF_000331535.1 PRJNA224116 SAMN02469986 AMZN00000000.1 reference genome 1237149 881893 Fulvivirga imtechensis AK7 strain=AK7 na latest Contig Major Full 2013-01-11 Fulvivirga imtechensis Genome Sequencing Institute of Microbial Technology GCA_000331535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/535/GCF_000331535.1_Fulvivirga_imtechensis_Genome_Sequencing/ na assembly from type material na haploid bacteria 6737864 6737864 42.500000 0 226 226 NCBI RefSeq GCF_000331535.1-RS_2026_05_02 2026-05-02 5613 5527 56 na GCF_000331575.1 PRJNA224116 SAMN02471015 ANOK00000000.1 reference genome 1191699 1191699 Calidifontibacillus oryziterrae strain=ZYK na latest Scaffold Major Full 2013-01-15 ASM33157v1 State Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, P. R. China GCA_000331575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/575/GCF_000331575.1_ASM33157v1/ na assembly from type material na haploid bacteria 3575797 3575103 36.000000 0 18 19 NCBI RefSeq GCF_000331575.1-RS_2025_12_09 2025-12-09 3444 3330 75 na GCF_000331615.1 PRJNA224116 SAMN02469332 ANHT00000000.1 na 1258567 562 Escherichia coli LCT-EC52 strain=LCT-EC52 na latest Scaffold Major Full 2013-01-15 genome assembly of LCT-EC52 strain of E.coli Beijing Genomics Institute GCA_000331615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/615/GCF_000331615.1_genome_assembly_of_LCT-EC52_strain_of_E.coli/ na na na haploid bacteria 5209752 5103280 50.500000 0 37 191 NCBI RefSeq GCF_000331615.1-RS_2025_06_09 2025-06-09 5056 4711 79 24604641 GCF_000331635.1 PRJNA224116 SAMN00847564 ANOZ00000000.1 na 1171378 29461 Brucella suis 019 strain=019 na latest Scaffold Major Full 2013-01-15 Brucella 019 Shihezi University GCA_000331635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/635/GCF_000331635.1_Brucella_019/ na na na haploid bacteria 3299107 3260545 57.500000 0 30 722 NCBI RefSeq GCF_000331635.1-RS_2026_02_24 2026-02-24 3619 3220 47 26821047 GCF_000331655.1 PRJNA224116 SAMN02470982 ANOD00000000.1 na 1266367 29459 Brucella melitensis 043 strain=43 na latest Scaffold Major Full 2013-01-15 Brucella melitensis 043 The Ministry of Science and Technology of the People's Republic of China GCA_000331655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/655/GCF_000331655.1_Brucella_melitensis_043/ na na na haploid bacteria 3289116 3267565 57.500000 0 28 480 NCBI RefSeq GCF_000331655.1-RS_2026_01_15 2026-01-15 3480 3120 50 na GCF_000331695.1 PRJNA224116 SAMN02602992 na na 1271752 34085 Riemerella anatipestifer RA-CH-2 strain=RA-CH-2 na latest Complete Genome Major Full 2013-01-14 ASM33169v1 Avian Disease Research Center, Sichuan Agricultural University GCA_000331695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/695/GCF_000331695.1_ASM33169v1/ na na na haploid bacteria 2166321 2166321 35.000000 1 1 1 NCBI RefSeq GCF_000331695.1-RS_2026_02_24 2026-02-24 2054 1978 53 24935762 GCF_000331715.1 PRJNA224116 SAMN02603631 na reference genome 1234378 29546 Lawsonia intracellularis N343 strain=N343 na latest Complete Genome Major Full 2013-01-14 ASM33171v1 Moredun Research Institute GCA_000331715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/715/GCF_000331715.1_ASM33171v1/ na na na haploid bacteria 1719192 1719192 33.000000 4 4 4 NCBI RefSeq GCF_000331715.1-RS_2026_04_26 2026-04-26 1498 1441 55 23472224 GCF_000331735.1 PRJNA224116 SAMN02603594 na reference genome 1278073 83455 Myxococcus stipitatus DSM 14675 strain=DSM 14675 na latest Complete Genome Major Full 2013-01-14 ASM33173v1 Max Planck Institute for Terrrestrial Microbiology GCA_000331735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/735/GCF_000331735.1_ASM33173v1/ na assembly designated as neotype na haploid bacteria 10350586 10350586 69.000000 1 1 1 NCBI RefSeq GCF_000331735.1-RS_2026_03_30 2026-03-30 8152 8000 95 23516218 GCF_000331815.1 PRJNA224116 SAMN02470677 ANIW00000000.1 na 1246994 1117645 Elizabethkingia anophelis R26 strain=R26 na latest Contig Major Full 2013-01-15 ASM33181v1 Stockholm University GCA_000331815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/815/GCF_000331815.1_ASM33181v1/ na assembly from type material na haploid bacteria 4032720 4032720 35.500000 0 66 66 NCBI RefSeq GCF_000331815.1-RS_2025_12_04 2025-12-04 3776 3704 44 24309745 GCF_000331915.1 PRJNA224116 SAMN02471473 AOCT00000000.2 na 1273539 1346 Streptococcus iniae IUSA1 strain=IUSA1 na latest Contig Major Full 2013-02-20 ASM33191v2 Veterinary Faculty:University Institute of Animal Health GCA_000331915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/915/GCF_000331915.1_ASM33191v2/ na na na haploid bacteria 2224950 2224950 36.500000 0 296 296 NCBI RefSeq GCF_000331915.1-RS_2026_04_17 2026-04-17 2273 2114 42 23516181 GCF_000331995.1 PRJNA224116 SAMN02603280 na reference genome 1121335 1510 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 strain=DSM 8532 na latest Complete Genome Major Full 2013-01-17 ASM33199v1 Georg-August-University-Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000331995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/331/995/GCF_000331995.1_ASM33199v1/ na assembly from type material na haploid bacteria 2974379 2974379 42.000000 1 1 1 NCBI RefSeq GCF_000331995.1-RS_2026_04_07 2026-04-07 2645 2540 61 23516204 GCF_000332015.1 PRJNA224116 SAMN02471393 ANOE00000000.1 na 1212547 1519 Clostridium tyrobutyricum UC7086 strain=UC7086 na latest Contig Major Full 2013-01-17 1st assembly Universita Cattolica del Sacro Cuore GCA_000332015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/015/GCF_000332015.1_1st_assembly/ na na na haploid bacteria 3064215 3064215 31.000000 0 110 110 NCBI RefSeq GCF_000332015.1-RS_2026_01_06 2026-01-06 3080 2970 57 23950123 GCF_000332035.1 PRJNA224116 SAMN02261353 ALVY00000000.1 na 102232 102232 Gloeocapsa sp. PCC 73106 strain=PCC 73106 na latest Contig Major Full 2013-01-17 ASM33203v1 JGI GCA_000332035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/035/GCF_000332035.1_ASM33203v1/ na na na haploid bacteria 4025114 4025114 41.000000 0 228 228 NCBI RefSeq GCF_000332035.1-RS_2024_08_13 2024-08-13 4098 3914 53 23277585 GCF_000332055.1 PRJNA224116 SAMN02261354 ALVZ00000000.1 na 102125 102125 Xenococcus sp. PCC 7305 strain=PCC 7305 na latest Contig Major Full 2013-01-17 ASM33205v1 JGI GCA_000332055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/055/GCF_000332055.1_ASM33205v1/ na na na haploid bacteria 5929641 5929641 39.500000 0 234 234 NCBI RefSeq GCF_000332055.1-RS_2024_08_13 2024-08-13 5374 5184 44 23277585 GCF_000332075.2 PRJNA224116 SAMN02261355 ALVU00000000.2 na 927677 927677 Synechocystis sp. PCC 7509 strain=PCC 7509 na latest Scaffold Major Full 2014-02-06 ASM33207v2 JGI GCA_000332075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/075/GCF_000332075.2_ASM33207v2/ na na na haploid bacteria 4908825 4908425 41.500000 0 4 8 NCBI RefSeq GCF_000332075.2-RS_2025_06_08 2025-06-08 4976 4818 60 23277585 GCF_000332095.2 PRJNA224116 SAMN02261357 ALVV00000000.2 na 1173264 1173264 Leptolyngbya sp. PCC 6406 strain=PCC 6406 na latest Scaffold Major Full 2014-01-15 ASM33209v2 JGI GCA_000332095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/095/GCF_000332095.2_ASM33209v2/ na na na haploid bacteria 5776957 5769237 55.000000 0 3 82 NCBI RefSeq GCF_000332095.2-RS_2024_12_29 2024-12-29 5134 5026 56 23277585 GCF_000332115.1 PRJNA224116 SAMN02603479 na reference genome 592029 328515 Nonlabens dokdonensis DSW-6 strain=DSW-6 na latest Complete Genome Major Full 2013-01-18 ASM33211v1 Korea Research Institute of Bioscience and Biotechnology GCA_000332115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/115/GCF_000332115.1_ASM33211v1/ na assembly from type material na haploid bacteria 3914632 3914632 35.500000 1 1 1 NCBI RefSeq GCF_000332115.1-RS_2025_12_09 2025-12-09 3491 3419 51 23292138 GCF_000332135.1 PRJNA224116 SAMN02261341 AJWF00000000.1 na 163908 163908 Anabaena sp. PCC 7108 strain=PCC 7108 na latest Scaffold Major Full 2013-01-22 ASM33213v1 JGI GCA_000332135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/135/GCF_000332135.1_ASM33213v1/ na na na haploid bacteria 5886741 5885741 39.000000 0 3 13 NCBI RefSeq GCF_000332135.1-RS_2024_08_13 2024-08-13 5168 5002 62 23277585 GCF_000332155.1 PRJNA224116 SAMN02261340 ALVI00000000.1 reference genome 402777 331992 Kamptonema formosum PCC 6407 strain=PCC 6407 na latest Scaffold Major Full 2013-01-22 ASM33215v1 JGI GCA_000332155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/155/GCF_000332155.1_ASM33215v1/ na na na haploid bacteria 6894060 6883820 43.500000 0 12 118 NCBI RefSeq GCF_000332155.1-RS_2025_12_09 2025-12-09 6018 5840 81 23277585 GCF_000332175.1 PRJNA224116 SAMN02261339 ALVK00000000.1 reference genome 118173 3687900 Portococcus stanieri PCC 6802 strain=PCC 6802 na latest Scaffold Major Full 2013-01-22 ASM33217v1 JGI GCA_000332175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/175/GCF_000332175.1_ASM33217v1/ na assembly from type material na haploid bacteria 5621883 5619683 48.000000 0 6 28 NCBI RefSeq GCF_000332175.1-RS_2026_02_27 2026-02-27 5410 5184 87 23277585 GCF_000332195.1 PRJNA224116 SAMN02261343 ALVL00000000.1 na 118161 118161 Pleurocapsa sp. PCC 7319 strain=PCC 7319 na latest Scaffold Major Full 2013-01-22 ASM33219v1 JGI GCA_000332195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/195/GCF_000332195.1_ASM33219v1/ na na na haploid bacteria 7386997 7384997 38.500000 0 10 30 NCBI RefSeq GCF_000332195.1-RS_2024_08_22 2024-08-22 6649 6390 55 23277585 GCF_000332215.1 PRJNA224116 SAMN02261350 ALWB00000000.1 reference genome 927668 927669 Pseudanabaena biceps PCC 7429 strain=PCC 7429 na latest Contig Major Full 2013-01-18 ASM33221v1 JGI GCA_000332215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/215/GCF_000332215.1_ASM33221v1/ na na na haploid bacteria 5476421 5476421 43.000000 0 464 464 NCBI RefSeq GCF_000332215.1-RS_2025_12_10 2025-12-10 4800 4513 54 23277585 GCF_000332235.1 PRJNA224116 SAMN02256519 ALVO00000000.1 reference genome 113355 669359 Geminocystis herdmanii PCC 6308 strain=PCC 6308 na latest Chromosome Major Full 2013-01-22 ASM33223v1 DOE Joint Genome Institute GCA_000332235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/235/GCF_000332235.1_ASM33223v1/ na assembly from type material na haploid bacteria 4263418 4262418 34.500000 1 1 11 NCBI RefSeq GCF_000332235.1-RS_2025_11_20 2025-11-20 4175 4067 49 23277585 GCF_000332275.1 PRJNA224116 SAMN02261338 ALWC00000000.1 na 195250 195250 Synechococcus sp. PCC 7336 strain=PCC 7336 na latest Chromosome Major Full 2013-01-22 ASM33227v1 JGI GCA_000332275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/275/GCF_000332275.1_ASM33227v1/ na na na haploid bacteria 5066637 5065937 53.500000 1 1 8 NCBI RefSeq GCF_000332275.1-RS_2024_08_13 2024-08-13 4650 4513 53 23277585 GCF_000332295.1 PRJNA224116 SAMN02261254 ANFJ00000000.1 reference genome 643473 1892405 Fortiea contorta PCC 7126 strain=PCC 7126 na latest Scaffold Major Full 2013-01-22 ASM33229v1 JGI GCA_000332295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/295/GCF_000332295.1_ASM33229v1/ na assembly from type material na haploid bacteria 5742264 5742064 42.000000 0 3 5 NCBI RefSeq GCF_000332295.1-RS_2026_03_28 2026-03-28 5296 5109 85 23277585 GCF_000332315.1 PRJNA224116 SAMN02261252 ANKN00000000.1 reference genome 317619 1223 Prochlorothrix hollandica PCC 9006 = CALU 1027 strain=PCC 9006 na latest Scaffold Major Full 2013-01-22 ASM33231v1 JGI GCA_000332315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/315/GCF_000332315.1_ASM33231v1/ na assembly from type material na haploid bacteria 5646343 5624343 54.500000 0 13 233 NCBI RefSeq GCF_000332315.1-RS_2025_12_09 2025-12-09 4791 4511 50 23277585 GCF_000332335.1 PRJNA224116 SAMN02261253 ANKO00000000.1 na 1173028 331992 Kamptonema formosum PCC 10802 strain=PCC 10802 na latest Scaffold Major Full 2013-01-22 ASM33233v1 JGI GCA_000332335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/335/GCF_000332335.1_ASM33233v1/ na na na haploid bacteria 8594406 8570006 54.000000 0 9 253 NCBI RefSeq GCF_000332335.1-RS_2025_09_28 2025-09-28 7285 6986 77 na GCF_000332355.1 PRJNA224116 SAMN02261249 ANFQ00000000.1 reference genome 102127 2862350 Baaleninema simplex PCC 7105 strain=PCC 7105 na latest Scaffold Major Full 2013-01-22 ASM33235v1 JGI GCA_000332355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/355/GCF_000332355.1_ASM33235v1/ na assembly from type material na haploid bacteria 6152351 6126551 51.500000 0 8 266 NCBI RefSeq GCF_000332355.1-RS_2025_09_22 2025-09-22 5375 5036 60 23277585 GCF_000332395.2 PRJNA224116 SAMN02436395 AOHB00000000.2 na 1242989 28183 Leptospira santarosai serovar Shermani str. 1342KT strain=1342KT na latest Contig Major Full 2013-06-21 gls454048v02 J. Craig Venter Institute GCA_000332395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/395/GCF_000332395.2_gls454048v02/ na na na haploid bacteria 3987811 3987811 42.000000 0 68 68 NCBI RefSeq GCF_000332395.2-RS_2026_01_30 2026-01-30 3705 3457 44 na GCF_000332415.1 PRJNA224116 SAMN02436408 AOHC00000000.2 na 1218598 28184 Leptospira weilii serovar Ranarum str. ICFT strain=ICFT na latest Contig Major Full 2013-04-08 gls454060v02 J. Craig Venter Institute GCA_000332415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/415/GCF_000332415.1_gls454060v02/ na na na haploid bacteria 4026722 4026722 42.500000 0 59 59 NCBI RefSeq GCF_000332415.1-RS_2026_03_30 2026-03-30 3697 3467 44 na GCF_000332435.1 PRJNA224116 SAMN02436570 AOHA00000000.2 na 1218593 28183 Leptospira santarosai str. ST188 strain=ST188 na latest Contig Major Full 2013-03-01 gls454005v02 J. Craig Venter Institute GCA_000332435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/435/GCF_000332435.1_gls454005v02/ na na na haploid bacteria 4062704 4062704 42.000000 0 88 88 NCBI RefSeq GCF_000332435.1-RS_2026_01_30 2026-01-30 3755 3495 45 na GCF_000332455.1 PRJNA224116 SAMN02436568 AOGY00000000.2 na 1218591 293085 Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 strain=Waz Holland na latest Contig Major Full 2013-04-08 gls454199v02 J. Craig Venter Institute GCA_000332455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/455/GCF_000332455.1_gls454199v02/ na assembly from type material na haploid bacteria 4232327 4232327 39.000000 0 89 89 NCBI RefSeq GCF_000332455.1-RS_2026_02_15 2026-02-15 4112 3972 46 na GCF_000332475.2 PRJNA224116 SAMN02436394 AOGX00000000.2 na 1249483 293069 Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 strain=Sao Paulo na latest Contig Major Full 2013-05-17 gls454202v02 J. Craig Venter Institute GCA_000332475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/475/GCF_000332475.2_gls454202v02/ na assembly from type material na haploid bacteria 4056240 4056240 38.000000 0 47 47 NCBI RefSeq GCF_000332475.2-RS_2026_04_21 2026-04-21 3868 3787 44 na GCF_000332495.1 PRJNA224116 SAMN02436484 AOGW00000000.2 reference genome 1257025 293075 Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 strain=LT 11-33 na latest Contig Major Full 2013-04-08 gls454203v02 J. Craig Venter Institute GCA_000332495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/495/GCF_000332495.1_gls454203v02/ na assembly from type material na haploid bacteria 4092188 4092188 38.000000 0 23 23 NCBI RefSeq GCF_000332495.1-RS_2025_12_13 2025-12-13 3872 3807 46 na GCF_000332515.2 PRJNA224116 SAMN02436569 AOGZ00000000.2 reference genome 1218599 29511 Leptospira wolbachii serovar Codice str. CDC strain=CDC na latest Contig Major Full 2013-05-17 gls454195v02 J. Craig Venter Institute GCA_000332515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/515/GCF_000332515.2_gls454195v02/ na assembly from type material na haploid bacteria 4081981 4081981 39.000000 0 25 25 NCBI RefSeq GCF_000332515.2-RS_2025_12_13 2025-12-13 3868 3789 45 na GCF_000332535.1 PRJNA224116 SAMN02436483 AOGV00000000.2 na 1249484 173 Leptospira interrogans serovar Copenhageni str. M20 strain=M20 na latest Contig Major Full 2013-04-08 gls454204v02 J. Craig Venter Institute GCA_000332535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/535/GCF_000332535.1_gls454204v02/ na na na haploid bacteria 4628955 4628955 35.000000 0 53 53 NCBI RefSeq GCF_000332535.1-RS_2026_02_15 2026-02-15 3814 3604 48 na GCF_000332555.2 PRJNA224116 SAMN02436571 AOHD00000000.2 na 1218564 28452 Leptospira alstonii serovar Pingchang str. 80-412 strain=80-412 na latest Contig Major Full 2013-08-07 gls454193v02 J. Craig Venter Institute GCA_000332555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/555/GCF_000332555.2_gls454193v02/ na na na haploid bacteria 4437303 4437303 42.500000 0 67 67 NCBI RefSeq GCF_000332555.2-RS_2026_02_08 2026-02-08 4035 3755 47 na GCF_000332585.1 PRJNA224116 SAMN02469975 AOCI00000000.1 na 267865 1126 Microcystis aeruginosa FACHB-905 = DIANCHI905 strain=DIANCHI905 na latest Contig Major Full 2013-01-22 MicAerD1.0 Institute of Hydrobiology, Chinese Academy of Sciences GCA_000332585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/585/GCF_000332585.1_MicAerD1.0/ na na na haploid bacteria 4858867 4858867 42.500000 0 335 335 NCBI RefSeq GCF_000332585.1-RS_2025_03_12 2025-03-12 4779 4279 54 na GCF_000332605.1 PRJNA224116 SAMN02470976 ANAR00000000.1 na 1246644 36809 Mycobacteroides abscessus 9808 strain=9808 na latest Scaffold Major Full 2013-01-24 SOAPdenovo v1.06 BGI GCA_000332605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/605/GCF_000332605.1_SOAPdenovo_v1.06/ na na na haploid bacteria 5218578 5204043 64.000000 0 68 131 NCBI RefSeq GCF_000332605.1-RS_2026_01_07 2026-01-07 5269 5114 53 na GCF_000332625.1 PRJNA224116 SAMN00811239 AMLP00000000.1 na 1160705 1938 Streptomyces viridochromogenes Tue57 strain=Tue57 na latest Contig Major Full 2013-01-22 STVIR_1.0 University of Freiburg GCA_000332625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/625/GCF_000332625.1_STVIR_1.0/ na na na haploid bacteria 9687428 9687428 71.000000 0 379 379 NCBI RefSeq GCF_000332625.1-RS_2025_08_14 2025-08-14 8917 8413 77 23788550 GCF_000332645.1 PRJNA224116 SAMN02470204 AMXN00000000.1 na 1236548 483913 Bacillus inaquosorum KCTC 13429 strain=KCTC 13429 na latest Contig Major Full 2013-01-22 BSI1.0 Chung-Ang university GCA_000332645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/645/GCF_000332645.1_BSI1.0/ na assembly from type material na haploid bacteria 4342448 4342448 43.500000 0 24 24 NCBI RefSeq GCF_000332645.1-RS_2025_09_21 2025-09-21 4382 4159 81 24231292 GCF_000332665.1 PRJNA224116 SAMN00116855 ANAK00000000.1 na 904739 1280 Staphylococcus aureus subsp. aureus 21236 strain=21236 na latest Contig Major Full 2013-01-22 Saur21236v1.0 J. Craig Venter Institute GCA_000332665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/665/GCF_000332665.1_Saur21236v1.0/ na na na haploid bacteria 2745204 2745204 32.500000 0 67 67 NCBI RefSeq GCF_000332665.1-RS_2025_03_19 2025-03-19 2767 2638 60 na GCF_000332685.1 PRJNA224116 SAMN02436572 ANAL00000000.1 na 904729 1280 Staphylococcus aureus subsp. aureus 21196 strain=21196 na latest Contig Major Full 2013-01-22 Saur21196v1.0 J. Craig Venter Institute GCA_000332685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/685/GCF_000332685.1_Saur21196v1.0/ na na na haploid bacteria 2799321 2799321 32.500000 0 78 78 NCBI RefSeq GCF_000332685.1-RS_2025_03_19 2025-03-19 2838 2682 66 na GCF_000332755.1 PRJNA224116 SAMN02603426 na na 1274814 562 Escherichia coli APEC O78 strain=APEC O78 na latest Complete Genome Major Full 2013-01-23 ASM33275v1 Iowa State University GCA_000332755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/755/GCF_000332755.1_ASM33275v1/ na na na haploid bacteria 4798435 4798435 50.500000 1 1 1 NCBI RefSeq GCF_000332755.1-RS_2025_05_17 2025-05-17 4718 4400 116 23516182 GCF_000332815.1 PRJNA224116 SAMN02470004 AOFD00000000.1 na 683150 683150 Arthrobacter nitrophenolicus strain=SJCon na latest Contig Major Full 2013-01-23 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000332815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/815/GCF_000332815.1_Whole_genome_assembly/ na assembly from type material na haploid bacteria 4389620 4389620 66.000000 0 142 142 NCBI RefSeq GCF_000332815.1-RS_2026_03_31 2026-03-31 4311 3569 56 23516196 GCF_000332835.1 PRJNA224116 SAMN02470612 AOGE00000000.1 na 1234597 94625 Brucella intermedia M86 strain=M86 na latest Contig Major Full 2013-01-23 ASM33283v1 National Centre for Cell Science GCA_000332835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/835/GCF_000332835.1_ASM33283v1/ na na na haploid bacteria 5188688 5188688 58.000000 0 148 148 NCBI RefSeq GCF_000332835.1-RS_2026_01_27 2026-01-27 5203 4903 71 23557353 GCF_000332855.1 PRJNA224116 SAMN02470882 ALPW00000000.1 na 1216295 470 Acinetobacter baumannii 53264 strain=53264 na latest Contig Major Full 2013-01-24 AB53264 SCELSE GCA_000332855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/855/GCF_000332855.1_AB53264/ na na na haploid bacteria 3976592 3976592 39.000000 0 130 130 NCBI RefSeq GCF_000332855.1-RS_2026_02_01 2026-02-01 3881 3713 66 23538992 GCF_000332875.2 PRJNA224116 SAMN02436796 AMEY00000000.1 na 649757 649756 Anaerostipes hadrus ATCC 29173 = JCM 17467 strain=DSM 3319 na latest Scaffold Minor Full 2013-01-29 ASM33287v2 WUGSC GCA_000332875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/875/GCF_000332875.2_ASM33287v2/ na assembly from type material na haploid bacteria 2772228 2771521 37.000000 0 73 101 NCBI RefSeq GCF_000332875.2-RS_2026_02_28 2026-02-28 2745 2640 58 na GCF_000332895.2 PRJNA224116 SAMN02471982 AJMG00000000.2 na 1167010 714 Aggregatibacter actinomycetemcomitans serotype c str. AAS4A strain=AAS4A na latest Scaffold Major Full 2015-08-17 AaAAS4av2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000332895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/895/GCF_000332895.2_AaAAS4av2.0/ na na na haploid bacteria 2126064 2036792 44.500000 0 28 48 NCBI RefSeq GCF_000332895.2-RS_2026_01_15 2026-01-15 2032 1862 57 23194436 GCF_000332915.2 PRJNA224116 SAMN02471981 AJME00000000.2 na 1167007 714 Aggregatibacter actinomycetemcomitans serotype e str. A160 strain=A160 na latest Scaffold Major Full 2015-08-17 AaA160v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000332915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/915/GCF_000332915.2_AaA160v2.0/ na na na haploid bacteria 2256834 2243639 44.500000 0 118 151 NCBI RefSeq GCF_000332915.2-RS_2026_04_20 2026-04-20 2277 2094 52 23194436 GCF_000332935.2 PRJNA224116 SAMN02471977 AJMF00000000.2 na 1167009 714 Aggregatibacter actinomycetemcomitans serotype b str. SCC4092 strain=SCC4092 na latest Scaffold Major Full 2015-08-17 AaSCC4092v2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000332935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/935/GCF_000332935.2_AaSCC4092v2.0/ na na na haploid bacteria 2099572 2038660 44.500000 0 31 52 NCBI RefSeq GCF_000332935.2-RS_2026_01_15 2026-01-15 2050 1869 54 23194436 GCF_000332955.2 PRJNA224116 SAMN02471978 AJMH00000000.2 na 1167008 714 Aggregatibacter actinomycetemcomitans serotype b str. S23A strain=S23A na latest Scaffold Major Full 2015-08-17 AaS23Av2.0 Bumgarner laboratory, Department of Microbiology, University of Washington GCA_000332955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/955/GCF_000332955.2_AaS23Av2.0/ na na na haploid bacteria 2170434 2122171 44.500000 0 44 74 NCBI RefSeq GCF_000332955.2-RS_2025_12_16 2025-12-16 2127 1955 54 23194436 GCF_000332975.1 PRJNA224116 SAMD00041806 BANR00000000.1 reference genome 1220583 36820 Gordonia aichiensis NBRC 108223 strain=NBRC 108223 na latest Contig Major Full 2013-01-11 ASM33297v1 National Institute of Technology and Evaluation GCA_000332975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/975/GCF_000332975.1_ASM33297v1/ na assembly from type material na haploid bacteria 5092029 5092029 65.500000 0 78 78 NCBI RefSeq GCF_000332975.1-RS_2025_09_02 2025-09-02 4658 4530 53 na GCF_000332995.1 PRJNA224116 SAMD00041764 BANS00000000.1 na 1220574 89053 Gordonia amicalis NBRC 100051 = JCM 11271 strain=NBRC 100051 na latest Contig Major Full 2013-01-11 ASM33299v1 National Institute of Technology and Evaluation GCA_000332995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/995/GCF_000332995.1_ASM33299v1/ na assembly from type material na haploid bacteria 4915471 4915471 67.500000 0 94 94 NCBI RefSeq GCF_000332995.1-RS_2025_08_08 2025-08-08 4508 4250 53 na GCF_000333015.1 PRJNA224116 SAMD00041827 BANT00000000.1 reference genome 1121927 53427 Gordonia hirsuta DSM 44140 = NBRC 16056 strain=NBRC 16056 na latest Contig Major Full 2013-01-11 ASM33301v1 National Institute of Technology and Evaluation GCA_000333015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/015/GCF_000333015.1_ASM33301v1/ na assembly from type material na haploid bacteria 3489460 3489460 68.500000 0 77 77 NCBI RefSeq GCF_000333015.1-RS_2025_08_08 2025-08-08 3261 3145 57 na GCF_000333035.1 PRJNA224116 SAMD00041808 BANU00000000.1 na 1223544 173559 Gordonia sihwensis NBRC 108236 strain=NBRC 108236 na latest Contig Major Full 2013-01-11 ASM33303v1 National Institute of Technology and Evaluation GCA_000333035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/035/GCF_000333035.1_ASM33303v1/ na assembly from type material na haploid bacteria 4140890 4140890 68.000000 0 64 64 NCBI RefSeq GCF_000333035.1-RS_2025_08_08 2025-08-08 3950 3827 60 na GCF_000333135.2 PRJNA224116 SAMN00255225 ALIZ00000000.2 na 985077 95486 Burkholderia cenocepacia BC7 strain=BC7 na latest Contig Major Full 2013-09-11 gbccbc7v2.0 J. Craig Venter Institute GCA_000333135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/135/GCF_000333135.2_gbccbc7v2.0/ na na na haploid bacteria 7961617 7961617 67.000000 0 295 295 NCBI RefSeq GCF_000333135.2-RS_2026_03_28 2026-03-28 7562 7209 97 24136849 GCF_000333155.2 PRJNA224116 SAMN00255233 ALJA00000000.2 na 985076 95486 Burkholderia cenocepacia K56-2Valvano strain=K56-2Valvano na latest Contig Major Full 2013-08-06 gbcckv2.0 J. Craig Venter Institute GCA_000333155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/155/GCF_000333155.2_gbcckv2.0/ na na na haploid bacteria 7750255 7750255 67.000000 0 19 19 NCBI RefSeq GCF_000333155.2-RS_2026_03_28 2026-03-28 7123 6866 96 24136849 GCF_000333175.1 PRJNA224116 SAMEA2271929 CAPK00000000.1 na 1246623 562 Escherichia coli O10:K5(L):H4 str. ATCC 23506 strain=ATCC 23506 na latest Contig Major Full 2013-01-14 ASM33317v1 RPI GCA_000333175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/175/GCF_000333175.1_ASM33317v1/ na na na haploid bacteria 5095957 5095957 50.500000 0 224 224 NCBI RefSeq GCF_000333175.1-RS_2025_09_28 2025-09-28 5122 4733 120 na GCF_000333195.1 PRJNA224116 SAMEA2272238 CAPL00000000.1 na 1268238 562 Escherichia coli O5:K4(L):H4 str. ATCC 23502 strain=ATCC 23502 na latest Contig Major Full 2013-01-14 ASM33319v1 RPI GCA_000333195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/195/GCF_000333195.1_ASM33319v1/ na na na haploid bacteria 4678866 4678866 50.500000 0 160 160 NCBI RefSeq GCF_000333195.1-RS_2025_09_21 2025-09-21 4684 4346 114 na GCF_000333255.1 PRJNA224116 SAMD00036564 BACT00000000.1 na 91459 91459 Methylobacterium sp. B1 strain=B1 na latest Contig Major Full 2012-12-28 ASM33325v1 Kazusa DNA Research Institute GCA_000333255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/255/GCF_000333255.1_ASM33325v1/ na na na haploid bacteria 5905119 5905119 69.500000 0 1090 1090 NCBI RefSeq GCF_000333255.1-RS_2024_09_15 2024-09-15 6352 5544 70 na GCF_000333275.1 PRJNA224116 SAMD00036565 BACU00000000.1 na 95605 95605 Azospirillum sp. B4 strain=B4 na latest Scaffold Major Full 2013-01-08 ASM33327v1 Kazusa DNA Research Institute GCA_000333275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/275/GCF_000333275.1_ASM33327v1/ na na na haploid bacteria 7345359 7345316 67.500000 0 744 746 NCBI RefSeq GCF_000333275.1-RS_2024_09_28 2024-09-28 6762 6424 78 na GCF_000333315.1 PRJNA224116 SAMD00036567 BACW00000000.1 na 95611 95611 Curtobacterium sp. B8 strain=B8 na latest Scaffold Major Full 2013-01-08 ASM33331v1 Kazusa DNA Research Institute GCA_000333315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/315/GCF_000333315.1_ASM33331v1/ na na na haploid bacteria 3374826 3374684 71.500000 0 703 708 NCBI RefSeq GCF_000333315.1-RS_2024_09_29 2024-09-29 3635 3255 57 na GCF_000333355.1 PRJNA224116 SAMD00036569 BACY00000000.1 na 95618 95618 Flavobacterium sp. B17 strain=B17 na latest Scaffold Major Full 2013-01-08 ASM33335v1 Kazusa DNA Research Institute GCA_000333355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/355/GCF_000333355.1_ASM33335v1/ na na na haploid bacteria 4165754 4165631 37.000000 0 697 701 NCBI RefSeq GCF_000333355.1-RS_2024_08_02 2024-08-02 4106 3699 66 na GCF_000333375.1 PRJNA224116 SAMD00036570 BACZ00000000.1 na 95614 95614 Curtobacterium sp. B18 strain=B18 na latest Scaffold Major Full 2013-01-08 ASM33337v1 Kazusa DNA Research Institute GCA_000333375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/375/GCF_000333375.1_ASM33337v1/ na na na haploid bacteria 3714089 3713671 71.500000 0 798 817 NCBI RefSeq GCF_000333375.1-RS_2025_08_18 2025-08-18 4007 3576 61 na GCF_000333395.1 PRJNA224116 SAMD00036571 BADA00000000.1 na 96765 96765 Microbacterium sp. B19 strain=B19 na latest Contig Major Full 2013-01-10 ASM33339v1 Kazusa DNA Research Institute GCA_000333395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/395/GCF_000333395.1_ASM33339v1/ na na na haploid bacteria 3653363 3653363 70.500000 0 576 576 NCBI RefSeq GCF_000333395.1-RS_2024_08_02 2024-08-02 3798 3444 58 na GCF_000333415.1 PRJNA224116 SAMD00036572 BADB00000000.1 na 95616 95616 Microbacterium sp. B24 strain=B24 na latest Contig Major Full 2013-01-10 ASM33341v1 Kazusa DNA Research Institute GCA_000333415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/415/GCF_000333415.1_ASM33341v1/ na na na haploid bacteria 3027872 3027872 69.500000 0 550 550 NCBI RefSeq GCF_000333415.1-RS_2025_08_18 2025-08-18 3279 2915 57 na GCF_000333455.1 PRJNA224116 SAMD00036574 BADD00000000.1 na 95607 95607 Rhodopseudomonas sp. B29 strain=B29 na latest Scaffold Major Full 2013-01-10 ASM33345v1 Kazusa DNA Research Institute GCA_000333455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/455/GCF_000333455.1_ASM33345v1/ na na na haploid bacteria 5516813 5516802 65.000000 0 802 803 NCBI RefSeq GCF_000333455.1-RS_2024_09_28 2024-09-28 5662 5073 52 na GCF_000333555.1 PRJNA224116 SAMD00036579 BADI00000000.1 na 137708 137708 Herbaspirillum sp. B65 strain=B65 na latest Scaffold Major Full 2013-01-10 ASM33355v1 Kazusa DNA Research Institute GCA_000333555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/555/GCF_000333555.1_ASM33355v1/ na na na haploid bacteria 5787549 5787418 61.500000 0 1241 1245 NCBI RefSeq GCF_000333555.1-RS_2025_08_18 2025-08-18 6092 5253 38 na GCF_000333595.1 PRJNA224116 SAMD00036581 BADK00000000.1 na 137721 137721 Azospirillum sp. B506 strain=B506 na latest Scaffold Major Full 2013-01-10 ASM33359v1 Kazusa DNA Research Institute GCA_000333595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/595/GCF_000333595.1_ASM33359v1/ na na na haploid bacteria 7238098 7238076 67.000000 0 1143 1144 NCBI RefSeq GCF_000333595.1-RS_2024_09_26 2024-09-26 7269 6660 103 na GCF_000333615.1 PRJNA224116 SAMD00036582 BADL00000000.1 na 137716 137716 Ideonella sp. B508-1 strain=B508-1 na latest Contig Major Full 2013-01-10 ASM33361v1 Kazusa DNA Research Institute GCA_000333615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/615/GCF_000333615.1_ASM33361v1/ na na na haploid bacteria 4936752 4936752 68.500000 0 631 631 NCBI RefSeq GCF_000333615.1-RS_2024_09_15 2024-09-15 5019 4653 59 na GCF_000333675.2 PRJNA224116 SAMN02469492 ANOY00000000.2 na 1257078 433924 Pseudacidovorax intermedius NH-1 strain=NH-1 na latest Contig Major Full 2013-07-31 Pseudacidovorax intermedius NH-1 China Agricultural University GCA_000333675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/675/GCF_000333675.2_Pseudacidovorax_intermedius_NH-1/ na na na haploid bacteria 5521109 5521109 69.000000 0 1567 1567 NCBI RefSeq GCF_000333675.2-RS_2025_08_05 2025-08-05 6143 5702 47 na GCF_000333695.1 PRJNA224116 SAMEA2271995 CAHZ00000000.1 na 1166017 36809 Mycobacteroides abscessus CF strain=CF smooth latest Scaffold Major Full 2013-01-18 ASM33369v1 EA3647 - Université de Versailles Saint-Quentin GCA_000333695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/695/GCF_000333695.1_ASM33369v1/ na na na haploid bacteria 4987320 4973613 64.000000 0 1 77 NCBI RefSeq GCF_000333695.1-RS_2026_01_03 2026-01-03 4961 4817 53 na GCF_000333755.1 PRJNA224116 SAMEA3138431 CANP00000000.1 na 1230343 28082 Legionella anisa str. Linanisette strain=Linanisette na latest Contig Major Full 2013-01-22 ASM33375v1 URMITE GCA_000333755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/755/GCF_000333755.1_ASM33375v1/ na na na haploid bacteria 4319733 4319733 38.000000 0 56 56 NCBI RefSeq GCF_000333755.1-RS_2026_03_21 2026-03-21 3922 3797 43 11136802;24503989 GCF_000333775.1 PRJNA224116 SAMEA2272394 CAOH00000000.1 na 1238452 955 Wolbachia pipientis wBol1-b strain=wBol1-b na latest Contig Major Full 2013-01-11 ASM33377v1 UQ GCA_000333775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/775/GCF_000333775.1_ASM33377v1/ na na na haploid bacteria 1377933 1377933 34.000000 0 144 144 NCBI RefSeq GCF_000333775.1-RS_2026_01_09 2026-01-09 1331 1180 41 na GCF_000333795.1 PRJNA224116 SAMEA2271959 CAOU00000000.2 reference genome 1261555 553633 Wolbachia endosymbiont str. valsugana of Drosophila suzukii strain=valsugana na latest Contig Major Full 2013-01-11 ASM33379v2 CRI-FEM GCA_000333795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/795/GCF_000333795.1_ASM33379v2/ na na na haploid bacteria 1415350 1415350 35.000000 0 110 110 NCBI RefSeq GCF_000333795.1-RS_2026_01_08 2026-01-08 1382 1216 42 na GCF_000333835.2 PRJNA224116 SAMN02470830 na na 1231719 210 Helicobacter pylori A45 strain=A45 na latest Complete Genome Major Full 2020-05-18 ASM33383v2 Scientific Research Institute of Physical-Chemical Medicine GCA_000333835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/835/GCF_000333835.2_ASM33383v2/ na na na haploid bacteria 1673791 1673791 38.500000 2 2 2 NCBI RefSeq GCF_000333835.2-RS_2025_07_16 2025-07-16 1609 1463 45 na GCF_000333895.2 PRJNA224116 SAMN01940370 ANFM00000000.2 reference genome 1056512 1056512 Grimontia indica strain=AK16 na latest Contig Major Full 2013-05-03 ASM33389v2 Institute of Microbial Technology GCA_000333895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/895/GCF_000333895.2_ASM33389v2/ na assembly from type material na haploid bacteria 5555590 5555590 48.500000 0 109 109 NCBI RefSeq GCF_000333895.2-RS_2026_03_30 2026-03-30 5026 4889 89 24465608 GCF_000333915.1 PRJNA224116 SAMN02470944 ANAP00000000.1 na 1245026 1398 Heyndrickxia coagulans XZL9 strain=XZL9 na latest Contig Major Full 2013-01-25 XZL9_v1 Shanghai Jiao Tong University GCA_000333915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/915/GCF_000333915.1_XZL9_v1/ na na na haploid bacteria 3424110 3424110 46.500000 0 232 232 NCBI RefSeq GCF_000333915.1-RS_2024_09_11 2024-09-11 3419 3162 123 23682151 GCF_000333955.1 PRJNA224116 SAMEA2271987 CAPS00000000.1 na 1268303 1268303 Rhodococcus sp. AW25M09 strain=AW25M09 na latest Contig Major Full 2013-01-22 ASM33395v1 salmonicida GCA_000333955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/955/GCF_000333955.1_ASM33395v1/ na na na haploid bacteria 5642031 5642031 64.000000 0 167 167 NCBI RefSeq GCF_000333955.1-RS_2025_08_25 2025-08-25 5413 5235 54 na GCF_000333995.1 PRJNA224116 SAMN02469654 AMZX00000000.1 na 1205752 317 Pseudomonas syringae BRIP39023 strain=BRIP39023 na latest Scaffold Major Full 2013-01-29 BRIP39023v2.0 CSIRO GCA_000333995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/333/995/GCF_000333995.1_BRIP39023v2.0/ na na na haploid bacteria 5938198 5930576 59.000000 0 34 71 NCBI RefSeq GCF_000333995.1-RS_2025_03_18 2025-03-18 5233 5064 65 23661484 GCF_000334035.1 PRJNA224116 SAMN02469653 AMXK00000000.1 na 1204471 317 Pseudomonas syringae BRIP34876 strain=BRIP34876 na latest Scaffold Major Full 2013-01-29 34876_v2.0 CSIRO GCA_000334035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/035/GCF_000334035.1_34876_v2.0/ na na na haploid bacteria 6015232 6005932 59.000000 0 99 148 NCBI RefSeq GCF_000334035.1-RS_2026_01_23 2026-01-23 5255 5034 61 23661484 GCF_000334055.1 PRJNA224116 SAMN02469652 AMXL00000000.1 na 1205751 317 Pseudomonas syringae BRIP34881 strain=BRIP34881 na latest Scaffold Major Full 2013-01-29 34881_v2.0 CSIRO GCA_000334055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/055/GCF_000334055.1_34881_v2.0/ na na na haploid bacteria 6017073 6008189 59.000000 0 96 157 NCBI RefSeq GCF_000334055.1-RS_2026_01_23 2026-01-23 5254 5029 63 23661484 GCF_000334075.1 PRJNA224116 SAMN02402357 AMXY00000000.1 na 1205753 343 Xanthomonas translucens DAR61454 strain=DAR61454 na latest Scaffold Major Full 2013-01-29 X61454_v2 CSIRO GCA_000334075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/075/GCF_000334075.1_X61454_v2/ na na na haploid bacteria 4467179 4452091 68.000000 0 215 404 NCBI RefSeq GCF_000334075.1-RS_2026_05_07 2026-05-07 4037 3698 58 24416331 GCF_000334155.1 PRJNA224116 SAMN02470111 ANNK00000000.1 reference genome 1134413 1134413 Halalkalibacterium ligniniphilum strain=L1 na latest Contig Major Full 2013-01-28 L1 Jiangsu University GCA_000334155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/155/GCF_000334155.1_L1/ na assembly from type material na haploid bacteria 3856255 3856255 41.000000 0 196 196 NCBI RefSeq GCF_000334155.1-RS_2025_11_20 2025-11-20 4022 3808 103 23516185 GCF_000334175.1 PRJNA224116 SAMN02470977 ANBU00000000.1 na 1245028 487 Neisseria meningitidis Nm11003 strain=Nm11003 na latest Scaffold Major Full 2013-01-29 SOAPdenovo v1.06 BGI GCA_000334175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/175/GCF_000334175.1_SOAPdenovo_v1.06/ na na na haploid bacteria 2127430 2070286 51.500000 0 80 225 NCBI RefSeq GCF_000334175.1-RS_2025_12_23 2025-12-23 2142 1911 60 na GCF_000334195.1 PRJNA224116 SAMN02469609 AMDG00000000.1 na 1224742 680 Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain=CAIM 519 na latest Contig Major Full 2013-01-29 Vc-CAIM519 CIAD, A.C. GCA_000334195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/195/GCF_000334195.1_Vc-CAIM519/ na assembly from type material na haploid bacteria 5076254 5076254 45.000000 0 213 213 NCBI RefSeq GCF_000334195.1-RS_2026_02_10 2026-02-10 4783 4479 60 na GCF_000334215.1 PRJNA224116 SAMN02470210 AMQY00000000.1 reference genome 1238190 553386 Vreelandella jeotgali Hwa strain=Hwa na latest Contig Major Full 2013-01-29 Hwa Kyung Hee University GCA_000334215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/215/GCF_000334215.1_Hwa/ na assembly from type material na haploid bacteria 2847098 2847098 63.000000 0 26 26 NCBI RefSeq GCF_000334215.1-RS_2025_08_25 2025-08-25 2628 2518 75 na GCF_000334405.1 PRJNA224116 SAMN02604108 na na 1072467 367806 Blattabacterium sp. (Blatta orientalis) str. Tarazona strain=Tarazona na latest Complete Genome Major Full 2013-01-30 ASM33440v1 Universitat de València GCA_000334405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/405/GCF_000334405.1_ASM33440v1/ na na na haploid bacteria 638184 638184 28.000000 2 2 2 NCBI RefSeq GCF_000334405.1-RS_2024_08_13 2024-08-13 637 586 40 23355305 GCF_000334435.1 PRJNA224116 SAMN02469458 AOIF00000000.1 na 931276 36745 Clostridium saccharoperbutylacetonicum N1-4(HMT) strain=ATCC 27021 na latest Contig Major Full 2013-01-30 CloSac1.0 CIB-CSIC GCA_000334435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/435/GCF_000334435.1_CloSac1.0/ na assembly from type material na haploid bacteria 6569628 6569628 29.500000 0 210 210 NCBI RefSeq GCF_000334435.1-RS_2025_08_07 2025-08-07 6057 5851 87 na GCF_000334455.1 PRJNA224116 SAMD00041810 BANX00000000.1 reference genome 1223545 320799 Gordonia soli NBRC 108243 strain=NBRC 108243 na latest Contig Major Full 2013-01-25 ASM33445v1 National Institute of Technology and Evaluation GCA_000334455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/455/GCF_000334455.1_ASM33445v1/ na assembly from type material na haploid bacteria 5375815 5375815 67.500000 0 60 60 NCBI RefSeq GCF_000334455.1-RS_2025_08_08 2025-08-08 4957 4858 51 na GCF_000334515.1 PRJNA224116 SAMEA3138432 na na 935296 548 Klebsiella aerogenes EA1509E strain=EA1509E na latest Complete Genome Major Full 2013-01-25 ASM33451v1 Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergents (URMITE) GCA_000334515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/515/GCF_000334515.1_ASM33451v1/ na na na haploid bacteria 5591105 5591105 55.000000 3 3 3 NCBI RefSeq GCF_000334515.1-RS_2025_12_31 2025-12-31 5436 5156 124 23071100 GCF_000334575.1 PRJNA224116 SAMN02299520 AKQX00000000.1 na 1159084 1313 Streptococcus pneumoniae PCS125219 strain=PCS125219 na latest Scaffold Major Full 2013-01-31 ASM33457v1 Washington University GCA_000334575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/575/GCF_000334575.1_ASM33457v1/ na na na haploid bacteria 2054290 2054290 39.500000 0 51 51 NCBI RefSeq GCF_000334575.1-RS_2026_02_01 2026-02-01 2168 1914 53 na GCF_000334595.1 PRJNA224116 SAMN02299521 AKQY00000000.1 na 1159085 1313 Streptococcus pneumoniae PCS70012 strain=PCS70012 na latest Scaffold Major Full 2013-01-31 ASM33459v1 Washington University GCA_000334595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/595/GCF_000334595.1_ASM33459v1/ na na na haploid bacteria 2089433 2088433 40.000000 0 47 48 NCBI RefSeq GCF_000334595.1-RS_2025_08_04 2025-08-04 2201 1957 73 na GCF_000334615.1 PRJNA224116 SAMN02299522 AKQZ00000000.1 na 1159086 1313 Streptococcus pneumoniae PCS81218 strain=PCS81218 na latest Scaffold Major Full 2013-01-31 ASM33461v1 Washington University GCA_000334615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/615/GCF_000334615.1_ASM33461v1/ na na na haploid bacteria 2044356 2044356 39.500000 0 171 171 NCBI RefSeq GCF_000334615.1-RS_2026_02_01 2026-02-01 2211 1932 39 na GCF_000334635.1 PRJNA224116 SAMN02299523 AKRA00000000.1 na 1159087 1313 Streptococcus pneumoniae PNI0002 strain=PNI0002 na latest Scaffold Major Full 2013-01-31 ASM33463v1 Washington University GCA_000334635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/635/GCF_000334635.1_ASM33463v1/ na na na haploid bacteria 2102252 2102252 39.500000 0 32 32 NCBI RefSeq GCF_000334635.1-RS_2026_01_31 2026-01-31 2211 1953 68 na GCF_000334655.1 PRJNA224116 SAMN02299524 AKRB00000000.1 na 1159088 1313 Streptococcus pneumoniae PNI0006 strain=PNI0006 na latest Scaffold Major Full 2013-01-31 ASM33465v1 Washington University GCA_000334655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/655/GCF_000334655.1_ASM33465v1/ na na na haploid bacteria 2052382 2050382 40.000000 0 3 5 NCBI RefSeq GCF_000334655.1-RS_2025_12_25 2025-12-25 2135 1902 61 na GCF_000334735.1 PRJNA224116 SAMN02299528 AKRF00000000.1 na 1159092 1313 Streptococcus pneumoniae PNI0010 strain=PNI0010 na latest Scaffold Major Full 2013-01-31 ASM33473v1 Washington University GCA_000334735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/735/GCF_000334735.1_ASM33473v1/ na na na haploid bacteria 2076802 2060802 40.000000 0 21 37 NCBI RefSeq GCF_000334735.1-RS_2026_01_23 2026-01-23 2167 1906 70 na GCF_000334755.1 PRJNA224116 SAMN02299529 AKRG00000000.1 na 1159093 1313 Streptococcus pneumoniae PNI0076 strain=PNI0076 na latest Scaffold Major Full 2013-01-31 ASM33475v1 Washington University GCA_000334755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/755/GCF_000334755.1_ASM33475v1/ na na na haploid bacteria 2079885 2079885 39.500000 0 154 154 NCBI RefSeq GCF_000334755.1-RS_2026_02_01 2026-02-01 2235 1950 45 na GCF_000334775.1 PRJNA224116 SAMN02299530 AKRH00000000.1 na 1159094 1313 Streptococcus pneumoniae PNI0153 strain=PNI0153 na latest Scaffold Major Full 2013-01-31 ASM33477v1 Washington University GCA_000334775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/775/GCF_000334775.1_ASM33477v1/ na na na haploid bacteria 2098804 2089804 39.500000 0 5 14 NCBI RefSeq GCF_000334775.1-RS_2026_01_03 2026-01-03 2197 1944 59 na GCF_000334795.1 PRJNA224116 SAMN02299531 AKRI00000000.1 na 1159098 1313 Streptococcus pneumoniae PNI0199 strain=PNI0199 na latest Scaffold Major Full 2013-01-31 ASM33479v1 Washington University GCA_000334795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/795/GCF_000334795.1_ASM33479v1/ na na na haploid bacteria 2049936 2049936 39.500000 0 143 143 NCBI RefSeq GCF_000334795.1-RS_2026_02_01 2026-02-01 2209 1934 48 na GCF_000334815.1 PRJNA224116 SAMN02299532 AKRJ00000000.1 na 1159100 1313 Streptococcus pneumoniae PNI0360 strain=PNI0360 na latest Scaffold Major Full 2013-01-31 ASM33481v1 Washington University GCA_000334815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/815/GCF_000334815.1_ASM33481v1/ na na na haploid bacteria 2047040 2047040 39.500000 0 157 157 NCBI RefSeq GCF_000334815.1-RS_2026_02_01 2026-02-01 2218 1943 48 na GCF_000334875.3 PRJNA224116 SAMN02470967 na na 1138452 1404 Priestia megaterium NCT-2 strain=NCT-2 na latest Complete Genome Major Full 2019-08-20 ASM33487v3 Shanghai Jiaotong University GCA_000334875.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/875/GCF_000334875.3_ASM33487v3/ na na na haploid bacteria 5883957 5883957 38.000000 11 11 11 NCBI RefSeq GCF_000334875.3-RS_2025_12_22 2025-12-22 6143 5805 202 24122235 GCF_000334895.1 PRJNA224116 SAMD00011631 BAFM00000000.1 reference genome 1232219 1232219 Halococcus agarilyticus strain=197A na latest Contig Major Full 2013-01-29 ASM33489v1 Japan Agency for Marine-Earth Science and Technology GCA_000334895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/895/GCF_000334895.1_ASM33489v1/ na na na haploid archaea 3476728 3476728 66.000000 0 58 58 NCBI RefSeq GCF_000334895.1-RS_2025_11_21 2025-11-21 3518 3380 51 na GCF_000334915.1 PRJNA224116 SAMN02470943 AMSF00000000.1 na 1234364 363848 Dyella ginsengisoli LA-4 strain=LA-4 na latest Contig Major Full 2013-01-31 version 1 of the Dyella ginsengisoli LA-4 genome Shanghai Jiao Tong University GCA_000334915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/915/GCF_000334915.1_version_1_of_the_Dyella_ginsengisoli_LA-4_genome/ na na na haploid bacteria 4546859 4546859 67.500000 0 99 99 NCBI RefSeq GCF_000334915.1-RS_2025_05_24 2025-05-24 4167 4073 57 24265495 GCF_000334935.1 PRJNA224116 SAMN02471936 AOMM00000000.1 na 1287056 1287055 Brachyspira hampsonii 30599 strain=30599 na latest Contig Major Full 2013-01-31 brachy30599_1.0 University of Saskatchewan GCA_000334935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/935/GCF_000334935.1_brachy30599_1.0/ na na na haploid bacteria 2943158 2943158 28.000000 0 612 612 NCBI RefSeq GCF_000334935.1-RS_2026_04_01 2026-04-01 3138 2747 40 na GCF_000334955.1 PRJNA224116 SAMN01821864 AOBV00000000.1 na 1261130 400946 Wohlfahrtiimonas chitiniclastica SH04 strain=SH04 na latest Scaffold Major Full 2013-02-04 WohChit1.0 hongweitest GCA_000334955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/955/GCF_000334955.1_WohChit1.0/ na na na haploid bacteria 2123894 2123239 43.500000 0 21 28 NCBI RefSeq GCF_000334955.1-RS_2026_02_20 2026-02-20 2030 1954 55 23558531 GCF_000334975.2 PRJNA224116 SAMN01112588 AODZ00000000.1 na 1005433 562 Escherichia coli 99.0815 strain=99.0815 na latest Contig Minor Full 2013-01-31 ASM33497v2 Institute for Genome Sciences GCA_000334975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/975/GCF_000334975.2_ASM33497v2/ na na na haploid bacteria 5211277 5211277 50.500000 0 293 293 NCBI RefSeq GCF_000334975.2-RS_2025_07_10 2025-07-10 5284 4854 91 na GCF_000334995.2 PRJNA224116 SAMN01112507 AOEA00000000.1 na 1005430 562 Escherichia coli 99.0816 strain=99.0816 na latest Contig Minor Full 2013-01-31 ASM33499v2 Institute for Genome Sciences GCA_000334995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/334/995/GCF_000334995.2_ASM33499v2/ na na na haploid bacteria 5194961 5194961 50.500000 0 225 225 NCBI RefSeq GCF_000334995.2-RS_2025_06_16 2025-06-16 5266 4818 95 na GCF_000335015.2 PRJNA224116 SAMN01112509 AOEF00000000.1 na 1005437 562 Escherichia coli 99.1793 strain=99.1793 na latest Contig Minor Full 2013-01-31 ASM33501v2 Institute for Genome Sciences GCA_000335015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/015/GCF_000335015.2_ASM33501v2/ na na na haploid bacteria 5284085 5284085 50.500000 0 182 182 NCBI RefSeq GCF_000335015.2-RS_2025_07_14 2025-07-14 5386 4928 104 na GCF_000335035.2 PRJNA224116 SAMN01112699 AOEG00000000.1 na 1005436 562 Escherichia coli 99.1805 strain=99.1805 na latest Contig Minor Full 2013-01-31 ASM33503v2 Institute for Genome Sciences GCA_000335035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/035/GCF_000335035.2_ASM33503v2/ na na na haploid bacteria 5175422 5175422 50.500000 0 305 305 NCBI RefSeq GCF_000335035.2-RS_2025_07_10 2025-07-10 5275 4801 85 na GCF_000335055.2 PRJNA224116 SAMN01112700 AOEH00000000.1 na 1051353 562 Escherichia coli ATCC 700728 strain=ATCC 700728 na latest Contig Minor Full 2013-01-31 ASM33505v2 Institute for Genome Sciences GCA_000335055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/055/GCF_000335055.2_ASM33505v2/ na na na haploid bacteria 5110616 5110616 50.500000 0 131 131 NCBI RefSeq GCF_000335055.2-RS_2025_07_10 2025-07-10 5082 4712 92 na GCF_000335075.2 PRJNA224116 SAMN01112702 AOEM00000000.1 na 1005512 562 Escherichia coli PA47 strain=PA47 na latest Contig Minor Full 2013-01-31 ASM33507v2 Institute for Genome Sciences GCA_000335075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/075/GCF_000335075.2_ASM33507v2/ na na na haploid bacteria 5218569 5218569 50.500000 0 157 157 NCBI RefSeq GCF_000335075.2-RS_2025_06_17 2025-06-17 5254 4850 98 na GCF_000335095.2 PRJNA224116 SAMN01112511 AOEN00000000.1 na 1005513 562 Escherichia coli PA48 strain=PA48 na latest Contig Minor Full 2013-01-31 ASM33509v2 Institute for Genome Sciences GCA_000335095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/095/GCF_000335095.2_ASM33509v2/ na na na haploid bacteria 5196577 5196577 50.000000 0 136 136 NCBI RefSeq GCF_000335095.2-RS_2025_06_17 2025-06-17 5207 4793 90 na GCF_000335115.1 PRJNA224116 SAMN01728946 AOEP00000000.1 na 1051348 562 Escherichia coli 7.1982 strain=7.1982 na latest Contig Major Full 2013-01-31 ASM33511v1 Institute for Genome Sciences GCA_000335115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/115/GCF_000335115.1_ASM33511v1/ na na na haploid bacteria 5225515 5225515 50.500000 0 141 141 NCBI RefSeq GCF_000335115.1-RS_2025_08_11 2025-08-11 5260 4843 98 na GCF_000335135.1 PRJNA224116 SAMN01728943 AOEQ00000000.1 na 1005439 562 Escherichia coli 99.1781 strain=99.1781 na latest Contig Major Full 2013-01-31 ASM33513v1 Institute for Genome Sciences GCA_000335135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/135/GCF_000335135.1_ASM33513v1/ na na na haploid bacteria 5226241 5226241 50.000000 0 158 158 NCBI RefSeq GCF_000335135.1-RS_2025_09_28 2025-09-28 5212 4795 101 na GCF_000335155.2 PRJNA224116 SAMN01728942 AOER00000000.1 na 1005435 562 Escherichia coli 99.1762 strain=99.1762 na latest Contig Minor Full 2013-01-31 ASM33515v2 Institute for Genome Sciences GCA_000335155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/155/GCF_000335155.2_ASM33515v2/ na na na haploid bacteria 5262491 5262491 50.500000 0 138 138 NCBI RefSeq GCF_000335155.2-RS_2025_06_17 2025-06-17 5283 4871 98 na GCF_000335175.2 PRJNA224116 SAMN01728948 AOES00000000.1 na 1051352 562 Escherichia coli PA35 strain=PA35 na latest Contig Minor Full 2013-01-31 ASM33517v2 Institute for Genome Sciences GCA_000335175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/175/GCF_000335175.2_ASM33517v2/ na na na haploid bacteria 5337574 5337574 50.000000 0 150 150 NCBI RefSeq GCF_000335175.2-RS_2025_07_11 2025-07-11 5377 4973 93 na GCF_000335195.2 PRJNA224116 SAMN01728945 AOET00000000.1 na 1051347 562 Escherichia coli 3.4880 strain=3.488 na latest Contig Minor Full 2013-01-31 ASM33519v2 Institute for Genome Sciences GCA_000335195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/195/GCF_000335195.2_ASM33519v2/ na na na haploid bacteria 5352644 5352644 50.000000 0 166 166 NCBI RefSeq GCF_000335195.2-RS_2025_02_12 2025-02-12 5469 5053 95 na GCF_000335215.2 PRJNA224116 SAMN01728944 AOEV00000000.1 na 1005423 562 Escherichia coli 99.0670 strain=99.067 na latest Contig Minor Full 2013-01-31 ASM33521v2 Institute for Genome Sciences GCA_000335215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/215/GCF_000335215.2_ASM33521v2/ na na na haploid bacteria 5190062 5190062 50.000000 0 130 130 NCBI RefSeq GCF_000335215.2-RS_2025_02_12 2025-02-12 5207 4820 93 na GCF_000335235.2 PRJNA224116 SAMN01112587 AODY00000000.1 na 1005434 562 Escherichia coli 99.0814 strain=99.0814 na latest Contig Minor Full 2013-01-31 ASM33523v2 Institute for Genome Sciences GCA_000335235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/235/GCF_000335235.2_ASM33523v2/ na na na haploid bacteria 5261077 5261077 50.500000 0 211 211 NCBI RefSeq GCF_000335235.2-RS_2025_06_15 2025-06-15 5299 4886 92 na GCF_000335255.2 PRJNA224116 SAMN01112697 AOEB00000000.1 na 1005432 562 Escherichia coli 99.0839 strain=99.0839 na latest Contig Minor Full 2013-01-31 ASM33525v2 Institute for Genome Sciences GCA_000335255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/255/GCF_000335255.2_ASM33525v2/ na na na haploid bacteria 5183560 5183560 50.500000 0 181 181 NCBI RefSeq GCF_000335255.2-RS_2025_07_10 2025-07-10 5212 4791 90 na GCF_000335275.2 PRJNA224116 SAMN01112696 AOEC00000000.1 na 1005431 562 Escherichia coli 99.0848 strain=99.0848 na latest Contig Minor Full 2013-01-31 ASM33527v2 Institute for Genome Sciences GCA_000335275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/275/GCF_000335275.2_ASM33527v2/ na na na haploid bacteria 5248306 5248306 50.500000 0 229 229 NCBI RefSeq GCF_000335275.2-RS_2025_07_14 2025-07-14 5323 4900 98 na GCF_000335295.2 PRJNA224116 SAMN01112508 AOED00000000.1 na 1005440 562 Escherichia coli 99.1753 strain=99.1753 na latest Contig Minor Full 2013-01-31 ASM33529v2 Institute for Genome Sciences GCA_000335295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/295/GCF_000335295.2_ASM33529v2/ na na na haploid bacteria 5138891 5138891 50.500000 0 253 253 NCBI RefSeq GCF_000335295.2-RS_2025_06_17 2025-06-17 5184 4733 98 na GCF_000335315.2 PRJNA224116 SAMN01112589 AOEE00000000.1 na 1005438 562 Escherichia coli 99.1775 strain=99.1775 na latest Contig Minor Full 2013-01-31 ASM33531v2 Institute for Genome Sciences GCA_000335315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/315/GCF_000335315.2_ASM33531v2/ na na na haploid bacteria 5146510 5146510 50.000000 0 277 277 NCBI RefSeq GCF_000335315.2-RS_2025_06_17 2025-06-17 5234 4708 84 na GCF_000335335.2 PRJNA224116 SAMN01112591 AOEJ00000000.1 na 1051351 562 Escherichia coli PA19 strain=PA19 na latest Contig Minor Full 2013-01-31 ASM33533v2 Institute for Genome Sciences GCA_000335335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/335/GCF_000335335.2_ASM33533v2/ na na na haploid bacteria 5214050 5214050 50.000000 0 135 135 NCBI RefSeq GCF_000335335.2-RS_2025_07_10 2025-07-10 5206 4816 85 na GCF_000335355.2 PRJNA224116 SAMN01112701 AOEL00000000.1 na 1005487 562 Escherichia coli PA2 strain=PA2 na latest Contig Minor Full 2013-01-31 ASM33535v2 Institute for Genome Sciences GCA_000335355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/355/GCF_000335355.2_ASM33535v2/ na na na haploid bacteria 5246924 5246924 50.500000 0 109 109 NCBI RefSeq GCF_000335355.2-RS_2025_07_14 2025-07-14 5233 4843 98 na GCF_000335375.2 PRJNA224116 SAMN01728947 AOEU00000000.1 na 1051346 562 Escherichia coli 95.0083 strain=95.0083 na latest Contig Minor Full 2013-01-31 ASM33537v2 Institute for Genome Sciences GCA_000335375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/375/GCF_000335375.2_ASM33537v2/ na na na haploid bacteria 5164678 5164678 50.000000 0 207 207 NCBI RefSeq GCF_000335375.2-RS_2025_06_17 2025-06-17 5261 4778 89 na GCF_000335415.2 PRJNA224116 SAMN01112590 AOEI00000000.1 na 1051349 562 Escherichia coli PA11 strain=PA11 na latest Contig Minor Full 2013-01-31 ASM33541v2 Institute for Genome Sciences GCA_000335415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/415/GCF_000335415.2_ASM33541v2/ na na na haploid bacteria 5158962 5158962 50.500000 0 121 121 NCBI RefSeq GCF_000335415.2-RS_2025_06_17 2025-06-17 5129 4738 97 na GCF_000335435.2 PRJNA224116 SAMN01112510 AOEK00000000.1 na 1051350 562 Escherichia coli PA13 strain=PA13 na latest Contig Minor Full 2013-01-31 ASM33543v2 Institute for Genome Sciences GCA_000335435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/435/GCF_000335435.2_ASM33543v2/ na na na haploid bacteria 5204148 5204148 50.000000 0 139 139 NCBI RefSeq GCF_000335435.2-RS_2025_06_17 2025-06-17 5207 4816 89 na GCF_000335455.2 PRJNA224116 SAMN01112512 AOEO00000000.1 na 1005492 562 Escherichia coli PA8 strain=PA8 na latest Contig Minor Full 2013-01-31 ASM33545v2 Institute for Genome Sciences GCA_000335455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/455/GCF_000335455.2_ASM33545v2/ na na na haploid bacteria 5260390 5260390 50.500000 0 122 122 NCBI RefSeq GCF_000335455.2-RS_2025_06_17 2025-06-17 5281 4873 99 na GCF_000335475.2 PRJNA224116 SAMN02470006 ANAH00000000.2 reference genome 1242864 43 Cystobacter fuscus DSM 2262 strain=DSM 2262 na latest Contig Major Full 2013-07-30 ASM33547v2 IMTECH-CSIR GCA_000335475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/475/GCF_000335475.2_ASM33547v2/ na assembly from type material na haploid bacteria 12282374 12282374 68.500000 0 76 76 NCBI RefSeq GCF_000335475.2-RS_2025_07_31 2025-07-31 10089 9892 67 na GCF_000335495.1 PRJNA224116 SAMN02470979 ALIL00000000.1 na 1073570 1308 Streptococcus thermophilus MTCC 5461 strain=MTCC 5461 na latest Contig Major Full 2013-02-01 ASM33549v1 Anand Agricultural University GCA_000335495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/495/GCF_000335495.1_ASM33549v1/ na na na haploid bacteria 1619896 1619896 39.500000 0 144 144 NCBI RefSeq GCF_000335495.1-RS_2026_03_21 2026-03-21 1779 1449 82 23568199 GCF_000335535.1 PRJNA224116 SAMN00761216 AMFP00000000.1 na 903927 470 Acinetobacter baumannii Naval-57 strain=Naval-57 na latest Contig Major Full 2013-02-01 gacin39v1.0 Walter Reed Army Institute of Research GCA_000335535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/535/GCF_000335535.1_gacin39v1.0/ na na na haploid bacteria 3953596 3953596 39.000000 0 138 138 NCBI RefSeq GCF_000335535.1-RS_2025_04_23 2025-04-23 3900 3677 80 26195261 GCF_000335555.1 PRJNA224116 SAMN00761217 AMFQ00000000.1 na 903945 903945 Acinetobacter sp. WC-743 strain=WC-743 na latest Contig Major Full 2013-02-01 gacin40v1.0 Walter Reed Army Institute of Research GCA_000335555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/555/GCF_000335555.1_gacin40v1.0/ na na na haploid bacteria 4902370 4902370 38.000000 0 154 154 NCBI RefSeq GCF_000335555.1-RS_2025_02_19 2025-02-19 4718 4462 119 na GCF_000335575.1 PRJNA224116 SAMN00761218 AMFR00000000.1 na 903928 903928 Acinetobacter sp. OIFC021 strain=OIFC021 na latest Contig Major Full 2013-02-01 gacin41v1.0 Walter Reed Army Institute of Research GCA_000335575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/575/GCF_000335575.1_gacin41v1.0/ na na na haploid bacteria 4084065 4084065 38.500000 0 108 108 NCBI RefSeq GCF_000335575.1-RS_2025_02_19 2025-02-19 4020 3783 81 na GCF_000335595.1 PRJNA224116 SAMN00761248 AMGA00000000.1 na 903937 470 Acinetobacter baumannii AA-014 strain=AA-014 na latest Contig Major Full 2013-02-01 gacin50v1.0 Walter Reed Army Institute of Research GCA_000335595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/595/GCF_000335595.1_gacin50v1.0/ na na na haploid bacteria 3857932 3857932 39.000000 0 61 61 NCBI RefSeq GCF_000335595.1-RS_2025_04_20 2025-04-20 3693 3521 100 26195261 GCF_000335615.1 PRJNA224116 SAMN00761249 AMFU00000000.1 na 903931 470 Acinetobacter baumannii WC-A-92 strain=WC-A-92 na latest Contig Major Full 2013-02-01 gacin44v1.0 Walter Reed Army Institute of Research GCA_000335615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/615/GCF_000335615.1_gacin44v1.0/ na na na haploid bacteria 3838812 3838812 39.000000 0 151 151 NCBI RefSeq GCF_000335615.1-RS_2025_04_24 2025-04-24 3830 3438 86 26195261 GCF_000335635.1 PRJNA224116 SAMN00761250 AMFW00000000.1 na 903933 470 Acinetobacter baumannii OIFC047 strain=OIFC047 na latest Contig Major Full 2013-02-01 gacin46v1.0 Walter Reed Army Institute of Research GCA_000335635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/635/GCF_000335635.1_gacin46v1.0/ na na na haploid bacteria 3740684 3740684 39.000000 0 39 39 NCBI RefSeq GCF_000335635.1-RS_2025_04_24 2025-04-24 3562 3402 79 26195261 GCF_000335655.1 PRJNA224116 SAMN00761245 AMFX00000000.1 na 903934 470 Acinetobacter baumannii OIFC338 strain=OIFC338 na latest Contig Major Full 2013-02-01 gacin47v1.0 Walter Reed Army Institute of Research GCA_000335655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/655/GCF_000335655.1_gacin47v1.0/ na na na haploid bacteria 4155681 4155681 39.000000 0 108 108 NCBI RefSeq GCF_000335655.1-RS_2025_04_24 2025-04-24 4077 3821 102 26195261 GCF_000335675.1 PRJNA224116 SAMN00761247 AMFZ00000000.1 na 903936 470 Acinetobacter baumannii Naval-78 strain=Naval-78 na latest Contig Major Full 2013-02-01 gacin49v1.0 Walter Reed Army Institute of Research GCA_000335675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/675/GCF_000335675.1_gacin49v1.0/ na na na haploid bacteria 4053379 4053379 39.000000 0 112 112 NCBI RefSeq GCF_000335675.1-RS_2025_04_23 2025-04-23 3971 3757 84 26195261 GCF_000335775.1 PRJNA224116 SAMN02471198 AMYW00000000.1 na 1229487 1229487 Flavobacterium sp. WG21 strain=WG21 na latest Contig Major Full 2013-02-01 WG21.1.0 University of Notre Dame GCA_000335775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/775/GCF_000335775.1_WG21.1.0/ na na na haploid bacteria 5198514 5198514 35.500000 0 84 84 NCBI RefSeq GCF_000335775.1-RS_2024_08_13 2024-08-13 4305 4204 66 na GCF_000335815.1 PRJNA224116 SAMN02415236 AMWD00000000.1 na 1198452 1198452 Janthinobacterium sp. HH01 strain=HH01 na latest Contig Major Full 2013-02-01 ASM33581v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000335815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/815/GCF_000335815.1_ASM33581v1/ na na na haploid bacteria 7114674 7114674 64.000000 0 2 2 NCBI RefSeq GCF_000335815.1-RS_2025_09_05 2025-09-05 6252 6097 108 23405110 GCF_000335835.1 PRJNA224116 SAMN00811267 AHUI00000000.1 na 687914 28901 Salmonella enterica subsp. enterica serovar Rissen str. 150 strain=150 na latest Contig Major Full 2013-02-01 ASM33583v1 FDA GCA_000335835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/835/GCF_000335835.1_ASM33583v1/ na na na haploid bacteria 4894253 4894253 52.000000 0 95 95 NCBI RefSeq GCF_000335835.1-RS_2025_03_19 2025-03-19 4817 4542 77 na GCF_000335855.1 PRJNA224116 SAMN01041177 AHUN00000000.1 na 696865 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. SE10 strain=SE10 na latest Contig Major Full 2013-02-01 ASM33585v1 FDA GCA_000335855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/855/GCF_000335855.1_ASM33585v1/ na na na haploid bacteria 4689836 4689836 52.000000 0 168 168 NCBI RefSeq GCF_000335855.1-RS_2025_05_23 2025-05-23 4691 4308 81 23383127 GCF_000335875.2 PRJNA224116 SAMN01041085 na na 696867 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 strain=18569 na latest Complete Genome Major Full 2015-05-11 ASM33587v2 FDA GCA_000335875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/875/GCF_000335875.2_ASM33587v2/ na na na haploid bacteria 4745329 4745329 52.000000 2 2 2 NCBI RefSeq GCF_000335875.2-RS_2025_05_21 2025-05-21 4656 4339 120 23383127 GCF_000335895.1 PRJNA224116 SAMN01041082 AHUQ00000000.1 na 696866 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 13-1 strain=13-1 na latest Contig Major Full 2013-02-01 ASM33589v1 FDA GCA_000335895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/895/GCF_000335895.1_ASM33589v1/ na na na haploid bacteria 4727159 4727159 52.000000 0 68 68 NCBI RefSeq GCF_000335895.1-RS_2025_05_22 2025-05-22 4676 4362 92 23383127 GCF_000335915.1 PRJNA224116 SAMN00811526 AHUS00000000.1 na 866914 28901 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1700 strain=08-1700 na latest Contig Major Full 2013-02-01 ASM33591v1 FDA GCA_000335915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/915/GCF_000335915.1_ASM33591v1/ na na na haploid bacteria 4900506 4900506 52.000000 0 71 71 NCBI RefSeq GCF_000335915.1-RS_2025_03_19 2025-03-19 4841 4600 83 na GCF_000335935.1 PRJNA224116 SAMN00811527 AHUT00000000.1 na 866915 28901 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 strain=08-1739 na latest Contig Major Full 2013-02-01 ASM33593v1 FDA GCA_000335935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/935/GCF_000335935.1_ASM33593v1/ na na na haploid bacteria 4930114 4930114 52.000000 0 77 77 NCBI RefSeq GCF_000335935.1-RS_2025_03_19 2025-03-19 4882 4645 85 na GCF_000335955.1 PRJNA224116 SAMN02418811 AHUW00000000.1 na 891420 28901 Salmonella enterica subsp. enterica serovar Javiana str. ATCC BAA-1593 strain=ATCC BAA-1593 na latest Contig Major Full 2013-02-01 ASM33595v1 FDA GCA_000335955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/955/GCF_000335955.1_ASM33595v1/ na na na haploid bacteria 4547243 4547243 52.000000 0 51 51 NCBI RefSeq GCF_000335955.1-RS_2025_03_19 2025-03-19 4460 4211 83 na GCF_000335975.1 PRJNA224116 SAMN02568546 AHUX00000000.1 na 745016 28901 Salmonella enterica subsp. enterica serovar Montevideo str. 316111868 strain=316111868 na latest Contig Major Full 2013-02-01 ASM33597v1 FDA GCA_000335975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/975/GCF_000335975.1_ASM33597v1/ na na na haploid bacteria 4325796 4325796 52.500000 0 128 128 NCBI RefSeq GCF_000335975.1-RS_2025_07_22 2025-07-22 4251 3982 119 na GCF_000335995.2 PRJNA224116 SAMN00811241 na na 685040 28901 Salmonella enterica subsp. enterica serovar Gallinarum str. 9184 strain=9184 ATCC 9184 latest Complete Genome Major Full 2017-01-26 ASM33599v2 FDA GCA_000335995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/335/995/GCF_000335995.2_ASM33599v2/ na na na haploid bacteria 4609911 4609911 52.000000 1 1 1 NCBI RefSeq GCF_000335995.2-RS_2025_05_22 2025-05-22 4474 4012 109 23383127 GCF_000336015.1 PRJNA224116 SAMN00811269 AHUJ00000000.1 na 687915 28901 Salmonella enterica subsp. enterica serovar Dublin str. SL1438 strain=SL1438 na latest Contig Major Full 2013-02-01 ASM33601v1 FDA GCA_000336015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/015/GCF_000336015.1_ASM33601v1/ na na na haploid bacteria 4872091 4872091 52.000000 0 52 52 NCBI RefSeq GCF_000336015.1-RS_2025_05_17 2025-05-17 4843 4482 89 23383127 GCF_000336055.1 PRJNA224116 SAMN01041179 AHUL00000000.1 na 696870 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. SE8a strain=SE8a na latest Contig Major Full 2013-02-01 ASM33605v1 FDA GCA_000336055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/055/GCF_000336055.1_ASM33605v1/ na na na haploid bacteria 4691268 4691268 52.000000 0 151 151 NCBI RefSeq GCF_000336055.1-RS_2025_05_16 2025-05-16 4696 4318 83 23383127 GCF_000336075.1 PRJNA224116 SAMN01041086 AHUM00000000.1 na 696864 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 20037 strain=20037 na latest Contig Major Full 2013-02-01 ASM33607v1 FDA GCA_000336075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/075/GCF_000336075.1_ASM33607v1/ na na na haploid bacteria 4701258 4701258 52.000000 0 248 248 NCBI RefSeq GCF_000336075.1-RS_2026_05_17 2026-05-17 4774 4348 87 23383127 GCF_000336115.1 PRJNA224116 SAMN01041174 AHUR00000000.1 na 696868 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. PT23 strain=PT23 na latest Contig Major Full 2013-02-01 ASM33611v1 FDA GCA_000336115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/115/GCF_000336115.1_ASM33611v1/ na na na haploid bacteria 4721404 4721404 52.000000 0 113 113 NCBI RefSeq GCF_000336115.1-RS_2025_05_16 2025-05-16 4705 4365 89 23383127 GCF_000336155.1 PRJNA224116 SAMN02568551 AHUV00000000.1 na 891424 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1153 strain=CDC_2009K1153 na latest Contig Major Full 2013-02-01 ASM33615v1 FDA GCA_000336155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/155/GCF_000336155.1_ASM33615v1/ na na na haploid bacteria 4881904 4881904 52.000000 0 94 94 NCBI RefSeq GCF_000336155.1-RS_2025_02_20 2025-02-20 4824 4571 85 na GCF_000336175.1 PRJNA224116 SAMN02568553 AHUY00000000.1 na 749930 28901 Salmonella enterica subsp. enterica serovar Tennessee str. 4535 strain=4535 na latest Contig Major Full 2013-02-01 ASM33617v1 FDA GCA_000336175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/175/GCF_000336175.1_ASM33617v1/ na na na haploid bacteria 4754367 4754367 52.500000 0 59 59 NCBI RefSeq GCF_000336175.1-RS_2025_07_22 2025-07-22 4637 4385 82 na GCF_000336195.1 PRJNA224116 SAMN00811538 AHUZ00000000.1 na 1159900 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4_delta.ramA::kan strain=LT2-4_delta.ramA::kan na latest Contig Major Full 2013-02-01 ASM33619v1 FDA GCA_000336195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/195/GCF_000336195.1_ASM33619v1/ na na na haploid bacteria 4803602 4803602 52.000000 0 60 60 NCBI RefSeq GCF_000336195.1-RS_2025_03_19 2025-03-19 4768 4458 126 na GCF_000336215.1 PRJNA224116 SAMN02664995 AHVA00000000.1 na 1159899 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4 strain=LT2-4 na latest Contig Major Full 2013-02-01 ASM33621v1 FDA GCA_000336215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/215/GCF_000336215.1_ASM33621v1/ na na na haploid bacteria 4807350 4807350 52.000000 0 33 33 NCBI RefSeq GCF_000336215.1-RS_2025_03_19 2025-03-19 4747 4465 125 na GCF_000336235.1 PRJNA224116 SAMN02595377 ADGJ00000000.1 na 702439 28133 Prevotella nigrescens F0103 strain=F0103 na latest Contig Major Full 2013-02-01 Prev_nigr_F0103_V1 Broad Institute GCA_000336235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/235/GCF_000336235.1_Prev_nigr_F0103_V1/ na na na haploid bacteria 3021735 3021735 42.500000 0 131 131 NCBI RefSeq GCF_000336235.1-RS_2025_12_05 2025-12-05 2710 2498 66 na GCF_000336255.1 PRJNA224116 SAMN02471729 AOCZ00000000.1 na 1274722 92490 Winslowiella toletana DAPP-PG 735 strain=DAPP-PG 735 na latest Scaffold Major Full 2013-02-04 v1.0 University of Exeter GCA_000336255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/255/GCF_000336255.1_v1.0/ na na na haploid bacteria 5272860 5199194 53.500000 0 20 94 NCBI RefSeq GCF_000336255.1-RS_2026_03_31 2026-03-31 4897 4770 56 23661482 GCF_000336275.1 PRJNA224116 SAMN01923431 ALWF00000000.1 na 1221452 1280 Staphylococcus aureus subsp. aureus 333 strain=333 na latest Contig Major Full 2013-02-01 S.aureus 333 National Center for Biological Sciences GCA_000336275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/275/GCF_000336275.1_S.aureus_333/ na na na haploid bacteria 2761324 2761324 32.500000 0 54 54 NCBI RefSeq GCF_000336275.1-RS_2025_05_17 2025-05-17 2777 2623 69 23544121 GCF_000336295.1 PRJNA224116 SAMN01923428 ALWG00000000.1 na 1226740 1280 Staphylococcus aureus subsp. aureus VH60 strain=VH60 na latest Contig Major Full 2013-02-01 S.aureus 60 National Center for Biological Sciences GCA_000336295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/295/GCF_000336295.1_S.aureus_60/ na na na haploid bacteria 2769926 2769926 32.500000 0 44 44 NCBI RefSeq GCF_000336295.1-RS_2025_03_19 2025-03-19 2757 2617 56 na GCF_000336315.1 PRJNA224116 SAMN01906555 ALWH00000000.1 na 1221453 1280 Staphylococcus aureus subsp. aureus 3989 strain=3989 na latest Contig Major Full 2013-02-01 S.aureus 3989 National Center for Biological Sciences GCA_000336315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/315/GCF_000336315.1_S.aureus_3989/ na na na haploid bacteria 2763653 2763653 32.500000 0 43 43 NCBI RefSeq GCF_000336315.1-RS_2025_05_17 2025-05-17 2755 2598 71 23544121 GCF_000336335.1 PRJNA224116 SAMN01110267 ALWE00000000.1 na 1221451 1280 Staphylococcus aureus subsp. aureus 120 strain=120 na latest Contig Major Full 2013-02-01 S.aureus 120 National Center for Biological Sciences GCA_000336335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/335/GCF_000336335.1_S.aureus_120/ na na na haploid bacteria 2776484 2776484 32.500000 0 56 56 NCBI RefSeq GCF_000336335.1-RS_2025_05_17 2025-05-17 2773 2627 59 23544121 GCF_000336385.2 PRJNA224116 SAMEA2272122 CAQP00000000.1 na 1286308 84531 Lysobacter antibioticus HS124 strain=HS124 na latest Scaffold Major Full 2013-02-01 HS124_Split10plusN OSU/OARDC GCA_000336385.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/385/GCF_000336385.2_HS124_Split10plusN/ na na na haploid bacteria 5144029 5141363 69.000000 0 183 228 NCBI RefSeq GCF_000336385.2-RS_2025_05_20 2025-05-20 4594 4461 52 na GCF_000336405.1 PRJNA224116 SAMN02604149 na na 1158600 1352 Enterococcus faecium ATCC 8459 = NRRL B-2354 strain=NRRL B-2354 na latest Complete Genome Major Full 2013-02-04 ASM33640v1 University of California, Davis GCA_000336405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/405/GCF_000336405.1_ASM33640v1/ na na na haploid bacteria 2849891 2849891 38.000000 2 2 2 NCBI RefSeq GCF_000336405.1-RS_2025_04_15 2025-04-15 2784 2615 70 24413604 GCF_000336425.1 PRJNA224116 SAMN02602965 na na 435998 615 Serratia marcescens WW4 strain=WW4 na latest Complete Genome Major Full 2013-02-04 ASM33642v1 Academia Sinica GCA_000336425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/425/GCF_000336425.1_ASM33642v1/ na na na haploid bacteria 5244703 5244703 59.500000 2 2 2 NCBI RefSeq GCF_000336425.1-RS_2026_04_02 2026-04-02 5024 4877 115 23398522;23558532 GCF_000336445.1 PRJNA224116 SAMN02603276 na na 1233873 1233873 Geobacillus sp. GHH01 strain=GHH01 na latest Complete Genome Major Full 2013-02-04 ASM33644v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000336445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/445/GCF_000336445.1_ASM33644v1/ na na na haploid bacteria 3583134 3583134 52.500000 1 1 1 NCBI RefSeq GCF_000336445.1-RS_2024_08_22 2024-08-22 3623 3364 123 23618712 GCF_000336465.1 PRJNA224116 SAMN02603296 na reference genome 1282356 200451 Pseudomonas poae RE*1-1-14 strain=RE*1-1-14 na latest Complete Genome Major Full 2013-02-04 ASM33646v1 Graz University of Technology GCA_000336465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/465/GCF_000336465.1_ASM33646v1/ na na na haploid bacteria 5512241 5512241 61.000000 1 1 1 NCBI RefSeq GCF_000336465.1-RS_2026_04_21 2026-04-21 4948 4738 85 na GCF_000336495.1 PRJNA224116 SAMN02471938 AOPM00000000.1 na 1216007 151081 Pseudoalteromonas ruthenica CP76 strain=CP76 na latest Contig Major Full 2013-02-04 PseRuthe1.0 University of Sevilla GCA_000336495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/495/GCF_000336495.1_PseRuthe1.0/ na na na haploid bacteria 4008085 4008085 47.500000 0 120 120 NCBI RefSeq GCF_000336495.1-RS_2026_01_23 2026-01-23 3765 3652 79 23704184 GCF_000336515.1 PRJNA224116 SAMN02471422 AOCP00000000.1 na 1231383 1280 Staphylococcus aureus KT/314250 strain=KT/314250 na latest Contig Major Full 2013-02-04 KT3Sta1.0 Universiti Sultan Zainal Abidin GCA_000336515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/515/GCF_000336515.1_KT3Sta1.0/ na na na haploid bacteria 2846051 2846051 32.500000 0 69 69 NCBI RefSeq GCF_000336515.1-RS_2025_03_19 2025-03-19 2870 2739 51 na GCF_000336555.1 PRJNA224116 SAMN02463899 AGWY00000000.1 reference genome 883079 1034 Afipia clevelandensis ATCC 49720 strain=ATCC 49720 na latest Scaffold Major Full 2013-02-06 Afip_clev_ATCC49720_G12581_V1 Broad Institute GCA_000336555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/555/GCF_000336555.1_Afip_clev_ATCC49720_G12581_V1/ na assembly from type material na haploid bacteria 4399548 4394444 61.500000 0 1 19 NCBI RefSeq GCF_000336555.1-RS_2026_05_26 2026-05-26 4275 4191 58 na GCF_000336575.1 PRJNA224116 SAMN02471939 AOPO00000000.1 na 1204738 664683 Vreelandella titanicae BH1 strain=BH1 na latest Contig Major Full 2013-02-04 HalTitan1.0 University of Sevilla GCA_000336575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/575/GCF_000336575.1_HalTitan1.0/ na assembly from type material na haploid bacteria 5339792 5339792 54.500000 0 48 48 NCBI RefSeq GCF_000336575.1-RS_2026_05_13 2026-05-13 4988 4880 66 23516210 GCF_000336595.1 PRJNA224116 SAMN02471423 AOCQ00000000.1 na 1231382 1280 Staphylococcus aureus KT/Y21 strain=KT/Y21 na latest Contig Major Full 2013-02-04 KTY21Sta1.0 Universiti Sultan Zainal Abidin GCA_000336595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/595/GCF_000336595.1_KTY21Sta1.0/ na na na haploid bacteria 2763469 2763469 32.500000 0 70 70 NCBI RefSeq GCF_000336595.1-RS_2025_02_07 2025-02-07 2750 2620 50 24723714 GCF_000336615.1 PRJNA224116 SAMN02471637 AOLW00000000.1 reference genome 1227452 396317 Haloarcula amylolytica JCM 13557 strain=JCM 13557 na latest Contig Major Full 2013-02-04 ASM33661v1 University of California, Davis GCA_000336615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/615/GCF_000336615.1_ASM33661v1/ na assembly from type material na haploid archaea 4225424 4225424 62.000000 0 81 81 NCBI RefSeq GCF_000336615.1-RS_2025_11_21 2025-11-21 4333 4134 85 25393412 GCF_000336635.1 PRJNA224116 SAMN02471638 AOLY00000000.1 na 1227453 29282 Haloarcula japonica DSM 6131 strain=DSM 6131 na latest Contig Major Full 2013-02-04 ASM33663v1 University of California, Davis GCA_000336635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/635/GCF_000336635.1_ASM33663v1/ na assembly from type material na haploid archaea 4280359 4280359 61.000000 0 48 48 NCBI RefSeq GCF_000336635.1-RS_2025_12_03 2025-12-03 4358 4188 62 25393412 GCF_000336655.1 PRJNA224116 SAMN02471659 AOLZ00000000.1 na 358396 229731 Natronobacterium lacisalsi AJ5 strain=AJ5 na latest Contig Major Full 2013-02-04 ASM33665v1 University of California, Davis GCA_000336655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/655/GCF_000336655.1_ASM33665v1/ na assembly from type material na haploid archaea 4338576 4338576 65.500000 0 79 79 NCBI RefSeq GCF_000336655.1-RS_2025_12_02 2025-12-02 4259 4093 61 25393412 GCF_000336675.1 PRJNA224116 SAMN02471661 AOMB00000000.1 reference genome 1132509 332168 Halococcus hamelinensis 100A6 strain=100A6 na latest Contig Major Full 2013-02-04 ASM33667v1 University of California, Davis GCA_000336675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/675/GCF_000336675.1_ASM33667v1/ na assembly from type material na haploid archaea 3419074 3419074 65.500000 0 46 46 NCBI RefSeq GCF_000336675.1-RS_2025_11_21 2025-11-21 3528 3412 52 25393412 GCF_000336695.1 PRJNA224116 SAMN02471675 AOMC00000000.1 na 931277 2250 Halococcus morrhuae DSM 1307 strain=DSM 1307 na latest Contig Major Full 2013-02-04 ASM33669v1 University of California, Davis GCA_000336695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/695/GCF_000336695.1_ASM33669v1/ na assembly from type material na haploid archaea 2991556 2991556 64.000000 0 167 167 NCBI RefSeq GCF_000336695.1-RS_2025_12_02 2025-12-02 3134 2944 49 25393412 GCF_000336715.1 PRJNA224116 SAMN02471640 AOMF00000000.1 reference genome 1227457 335952 Halococcus thailandensis JCM 13552 strain=JCM 13552 na latest Contig Major Full 2013-02-04 ASM33671v1 University of California, Davis GCA_000336715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/715/GCF_000336715.1_ASM33671v1/ na assembly from type material na haploid archaea 4052434 4052434 62.000000 0 198 198 NCBI RefSeq GCF_000336715.1-RS_2025_11_20 2025-11-20 4254 3944 69 25393412 GCF_000336735.1 PRJNA224116 SAMN02471657 AOLL00000000.1 na 1227458 2246 Haloferax volcanii JCM 10717 strain=JCM 10717 na latest Contig Major Full 2013-02-04 ASM33673v1 University of California, Davis GCA_000336735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/735/GCF_000336735.1_ASM33673v1/ na assembly from heterotypic synonym type material na haploid archaea 3649262 3649262 66.500000 0 36 36 NCBI RefSeq GCF_000336735.1-RS_2025_12_03 2025-12-03 3755 3623 70 25393412 GCF_000336755.1 PRJNA224116 SAMN02471641 AOLK00000000.1 reference genome 1230453 403191 Haloferax elongans ATCC BAA-1513 strain=ATCC BAA-1513 na latest Contig Major Full 2013-02-04 ASM33675v1 University of California, Davis GCA_000336755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/755/GCF_000336755.1_ASM33675v1/ na assembly from type material na haploid archaea 3952136 3952136 61.000000 0 27 27 NCBI RefSeq GCF_000336755.1-RS_2025_11_21 2025-11-21 3992 3863 62 25393412 GCF_000336775.1 PRJNA224116 SAMN02471685 AOLJ00000000.1 na 1227459 35746 Haloferax gibbonsii ATCC 33959 strain=ATCC 33959 na latest Contig Major Full 2013-02-04 ASM33677v1 University of California, Davis GCA_000336775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/775/GCF_000336775.1_ASM33677v1/ na assembly from type material na haploid archaea 4057322 4057322 66.000000 0 30 30 NCBI RefSeq GCF_000336775.1-RS_2025_12_02 2025-12-02 4087 3945 66 25393412 GCF_000336795.1 PRJNA224116 SAMN02471684 AOLH00000000.1 na 1230452 2246 Haloferax volcanii DSM 14919 strain=DSM 14919 na latest Contig Major Full 2013-02-04 ASM33679v1 University of California, Davis GCA_000336795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/795/GCF_000336795.1_ASM33679v1/ na assembly from heterotypic synonym type material na haploid archaea 3619064 3619064 66.500000 0 33 33 NCBI RefSeq GCF_000336795.1-RS_2025_12_06 2025-12-06 3726 3588 65 25393412 GCF_000336815.1 PRJNA224116 SAMN02471666 AOLG00000000.1 na 1227461 381852 Haloferax prahovense DSM 18310 strain=DSM 18310 na latest Contig Major Full 2013-02-04 ASM33681v1 University of California, Davis GCA_000336815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/815/GCF_000336815.1_ASM33681v1/ na assembly from type material na haploid archaea 3998799 3998799 65.500000 0 58 58 NCBI RefSeq GCF_000336815.1-RS_2025_11_20 2025-11-20 4066 3905 70 25393412 GCF_000336835.1 PRJNA224116 SAMN02471635 AOLE00000000.1 na 1227463 1227463 Haloferax sp. ATCC BAA-645 strain=ATCC BAA-645 na latest Contig Major Full 2013-02-04 ASM33683v1 University of California, Davis GCA_000336835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/835/GCF_000336835.1_ASM33683v1/ na na na haploid archaea 3598205 3598205 66.500000 0 41 41 NCBI RefSeq GCF_000336835.1-RS_2025_11_20 2025-11-20 3689 3573 62 25393412 GCF_000336855.1 PRJNA224116 SAMN02471676 AOLD00000000.1 na 1227464 1227464 Haloferax sp. ATCC BAA-646 strain=ATCC BAA-646 na latest Contig Major Full 2013-02-04 ASM33685v1 University of California, Davis GCA_000336855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/855/GCF_000336855.1_ASM33685v1/ na na na haploid archaea 3609529 3609529 66.500000 0 48 48 NCBI RefSeq GCF_000336855.1-RS_2024_10_21 2024-10-21 3694 3568 64 25393412 GCF_000336875.1 PRJNA224116 SAMN02471648 AOJK00000000.1 reference genome 1227465 416585 Halorubrum californiense DSM 19288 strain=DSM 19288 na latest Contig Major Full 2013-02-04 ASM33687v1 University of California, Davis GCA_000336875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/875/GCF_000336875.1_ASM33687v1/ na assembly from type material na haploid archaea 3682872 3682872 66.000000 0 83 83 NCBI RefSeq GCF_000336875.1-RS_2025_11_20 2025-11-20 3704 3471 53 25393412 GCF_000336895.1 PRJNA224116 SAMN02471678 AOLX00000000.1 na 1230451 43776 Haloarcula argentinensis DSM 12282 strain=DSM 12282 na latest Contig Major Full 2013-02-04 ASM33689v1 University of California, Davis GCA_000336895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/895/GCF_000336895.1_ASM33689v1/ na assembly from type material na haploid archaea 4147107 4147107 61.000000 0 33 33 NCBI RefSeq GCF_000336895.1-RS_2025_11_20 2025-11-20 4267 4119 82 25393412 GCF_000336915.1 PRJNA224116 SAMN02471639 AOMD00000000.1 na 1227455 62319 Halococcus saccharolyticus DSM 5350 strain=DSM 5350 na latest Contig Major Full 2013-02-04 ASM33691v1 University of California, Davis GCA_000336915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/915/GCF_000336915.1_ASM33691v1/ na assembly from type material na haploid archaea 3449700 3449700 64.000000 0 36 36 NCBI RefSeq GCF_000336915.1-RS_2025_11_20 2025-11-20 3572 3430 54 25393412 GCF_000336935.1 PRJNA224116 SAMN02471636 AOME00000000.1 na 1227456 36738 Halococcus salifodinae DSM 8989 strain=DSM 8989 na latest Contig Major Full 2013-02-04 ASM33693v1 University of California, Davis GCA_000336935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/935/GCF_000336935.1_ASM33693v1/ na assembly from type material na haploid archaea 4199784 4199784 63.500000 0 109 109 NCBI RefSeq GCF_000336935.1-RS_2025_11_20 2025-11-20 4216 3962 58 25393412 GCF_000336975.1 PRJNA224116 SAMN02471677 AOLF00000000.1 na 1227462 1227462 Haloferax sp. ATCC BAA-644 strain=ATCC BAA-644 na latest Contig Major Full 2013-02-04 ASM33697v1 University of California, Davis GCA_000336975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/975/GCF_000336975.1_ASM33697v1/ na na na haploid archaea 3587033 3587033 66.500000 0 38 38 NCBI RefSeq GCF_000336975.1-RS_2024_10_21 2024-10-21 3658 3531 62 25393412 GCF_000336995.1 PRJNA224116 SAMN02471664 AOJI00000000.1 reference genome 1230454 368623 Halorubrum aidingense JCM 13560 strain=JCM 13560 na latest Contig Major Full 2013-02-04 ASM33699v1 University of California, Davis GCA_000336995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/336/995/GCF_000336995.1_ASM33699v1/ na assembly from type material na haploid archaea 3108525 3108525 67.000000 0 37 37 NCBI RefSeq GCF_000336995.1-RS_2025_11_20 2025-11-20 3126 3014 64 25393412 GCF_000337015.1 PRJNA224116 SAMN02471647 AOJJ00000000.1 na 1230455 29283 Halorubrum distributum JCM 13916 strain=JCM 13916 na latest Contig Major Full 2013-02-04 ASM33701v1 University of California, Davis GCA_000337015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/015/GCF_000337015.1_ASM33701v1/ na assembly from heterotypic synonym type material na haploid archaea 3382601 3382601 67.500000 0 110 110 NCBI RefSeq GCF_000337015.1-RS_2025_11_20 2025-11-20 3469 3305 74 25393412 GCF_000337035.1 PRJNA224116 SAMN02471634 AOJL00000000.1 reference genome 1227466 64713 Halorubrum coriense DSM 10284 strain=DSM 10284 na latest Contig Major Full 2013-02-04 ASM33703v1 University of California, Davis GCA_000337035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/035/GCF_000337035.1_ASM33703v1/ na assembly from type material na haploid archaea 3645313 3645313 67.000000 0 69 69 NCBI RefSeq GCF_000337035.1-RS_2025_11_21 2025-11-21 3709 3518 55 25393412 GCF_000337055.1 PRJNA224116 SAMN02471665 AOJM00000000.1 na 1227467 29283 Halorubrum distributum JCM 9100 strain=JCM 9100 na latest Contig Major Full 2013-02-04 ASM33705v1 University of California, Davis GCA_000337055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/055/GCF_000337055.1_ASM33705v1/ na assembly from type material na haploid archaea 3307369 3307369 68.000000 0 83 83 NCBI RefSeq GCF_000337055.1-RS_2025_11_20 2025-11-20 3323 3168 66 25393412 GCF_000337075.1 PRJNA224116 SAMN02471650 AOJO00000000.1 na 1227481 1227480 Halorubrum hochstenium ATCC 700873 strain=ATCC 700873 na latest Contig Major Full 2013-02-04 ASM33707v1 University of California, Davis GCA_000337075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/075/GCF_000337075.1_ASM33707v1/ na na na haploid archaea 3037532 3037532 69.000000 0 64 64 NCBI RefSeq GCF_000337075.1-RS_2026_02_19 2026-02-19 3095 2970 61 25393412 GCF_000337095.1 PRJNA224116 SAMN02471630 AOIV00000000.1 reference genome 1227487 411361 Halogeometricum pallidum JCM 14848 strain=JCM 14848 na latest Contig Major Full 2013-02-04 ASM33709v1 University of California, Davis GCA_000337095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/095/GCF_000337095.1_ASM33709v1/ na assembly from type material na haploid archaea 4384515 4384515 65.500000 0 45 45 NCBI RefSeq GCF_000337095.1-RS_2025_11_21 2025-11-21 4410 4232 58 25393412 GCF_000337135.1 PRJNA224116 SAMN02471674 AOIN00000000.1 reference genome 1227492 68911 Natrialba chahannaoensis JCM 10990 strain=JCM 10990 na latest Contig Major Full 2013-02-04 ASM33713v1 University of California, Davis GCA_000337135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/135/GCF_000337135.1_ASM33713v1/ na assembly from type material na haploid archaea 4309274 4309274 60.500000 0 106 106 NCBI RefSeq GCF_000337135.1-RS_2025_11_21 2025-11-21 4164 3923 57 25393412 GCF_000337155.1 PRJNA224116 SAMN02471672 AOIK00000000.1 na 1227494 222984 Natrinema altunense JCM 12890 strain=JCM 12890 na latest Contig Major Full 2013-02-04 ASM33715v1 University of California, Davis GCA_000337155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/155/GCF_000337155.1_ASM33715v1/ na assembly from type material na haploid archaea 3774970 3774970 64.500000 0 52 52 NCBI RefSeq GCF_000337155.1-RS_2025_11_20 2025-11-20 3843 3677 63 25393412 GCF_000337175.1 PRJNA224116 SAMN02471627 AOIJ00000000.1 reference genome 1230459 419186 Natrinema gari JCM 14663 strain=JCM 14663 na latest Contig Major Full 2013-02-04 ASM33717v1 University of California, Davis GCA_000337175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/175/GCF_000337175.1_ASM33717v1/ na assembly from type material na haploid archaea 4023692 4023692 63.500000 0 88 88 NCBI RefSeq GCF_000337175.1-RS_2025_11_20 2025-11-20 4140 3882 71 25393412 GCF_000337195.1 PRJNA224116 SAMN02471670 AOID00000000.1 reference genome 1227496 88724 Natrinema versiforme JCM 10478 strain=JCM 10478 na latest Contig Major Full 2013-02-04 ASM33719v1 University of California, Davis GCA_000337195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/195/GCF_000337195.1_ASM33719v1/ na assembly from type material na haploid archaea 4190799 4190799 64.000000 0 72 72 NCBI RefSeq GCF_000337195.1-RS_2025_11_20 2025-11-20 4306 4096 58 25393412 GCF_000337215.1 PRJNA224116 SAMN02471623 AOHZ00000000.1 reference genome 1227499 253107 Natronolimnohabitans innermongolicus JCM 12255 strain=JCM 12255 na latest Contig Major Full 2013-02-04 ASM33721v1 University of California, Davis GCA_000337215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/215/GCF_000337215.1_ASM33721v1/ na assembly from type material na haploid archaea 4588634 4588634 64.500000 0 121 121 NCBI RefSeq GCF_000337215.1-RS_2025_11_20 2025-11-20 4531 4349 59 25393412 GCF_000337235.1 PRJNA224116 SAMN02471668 AOHW00000000.1 na 1114856 63128 Natronorubrum tibetense GA33 strain=GA33 na latest Contig Major Full 2013-02-04 ASM33723v1 University of California, Davis GCA_000337235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/235/GCF_000337235.1_ASM33723v1/ na assembly from type material na haploid archaea 4926841 4926841 62.500000 0 59 59 NCBI RefSeq GCF_000337235.1-RS_2025_12_02 2025-12-02 4793 4576 60 25393412 GCF_000337255.1 PRJNA224116 SAMN02471620 AOHV00000000.1 na 795797 413810 Halalkalicoccus jeotgali B3 strain=B3 na latest Contig Major Full 2013-02-04 ASM33725v1 University of California, Davis GCA_000337255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/255/GCF_000337255.1_ASM33725v1/ na assembly from type material na haploid archaea 3614122 3614122 62.500000 0 52 52 NCBI RefSeq GCF_000337255.1-RS_2025_12_03 2025-12-03 3860 3696 54 25393412 GCF_000337275.1 PRJNA224116 SAMN02471645 AOLR00000000.1 na 662476 2238 Haloarcula marismortui ATCC 33800 strain=ATCC 33800 na latest Contig Major Full 2013-02-04 ASM33727v1 University of California, Davis GCA_000337275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/275/GCF_000337275.1_ASM33727v1/ na assembly from heterotypic synonym type material na haploid archaea 4405164 4405164 61.000000 0 84 84 NCBI RefSeq GCF_000337275.1-RS_2025_11_20 2025-11-20 4537 4356 56 25393412 GCF_000337295.1 PRJNA224116 SAMN02471643 AOLO00000000.1 na 523841 2252 Haloferax mediterranei ATCC 33500 strain=ATCC 33500 na latest Contig Major Full 2013-02-04 ASM33729v1 University of California, Davis GCA_000337295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/295/GCF_000337295.1_ASM33729v1/ na assembly from type material na haploid archaea 3894540 3894540 60.500000 0 16 16 NCBI RefSeq GCF_000337295.1-RS_2025_12_03 2025-12-03 3949 3812 62 25393412 GCF_000337315.1 PRJNA224116 SAMN02471619 AOHU00000000.1 na 309800 2246 Haloferax volcanii DS2 strain=DS2 na latest Contig Major Full 2013-02-04 ASM33731v1 University of California, Davis GCA_000337315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/315/GCF_000337315.1_ASM33731v1/ na assembly from type material na haploid archaea 3866754 3866754 66.000000 0 119 119 NCBI RefSeq GCF_000337315.1-RS_2025_11_20 2025-11-20 3991 3767 59 25393412 GCF_000337335.1 PRJNA224116 SAMN02471649 AOJN00000000.1 na 1227468 29283 Halorubrum distributum JCM 10118 strain=JCM 10118 na latest Contig Major Full 2013-02-04 ASM33733v1 University of California, Davis GCA_000337335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/335/GCF_000337335.1_ASM33733v1/ na assembly from type material na haploid archaea 3306135 3306135 68.000000 0 68 68 NCBI RefSeq GCF_000337335.1-RS_2025_12_02 2025-12-02 3303 3171 60 25393412 GCF_000337355.1 PRJNA224116 SAMN02471633 AOJH00000000.1 reference genome 1230456 478441 Halorubrum kocurii JCM 14978 strain=JCM 14978 na latest Contig Major Full 2013-02-04 ASM33735v1 University of California, Davis GCA_000337355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/355/GCF_000337355.1_ASM33735v1/ na assembly from type material na haploid archaea 3619738 3619738 67.000000 0 105 105 NCBI RefSeq GCF_000337355.1-RS_2025_11_20 2025-11-20 3634 3456 54 25393412 GCF_000337375.1 PRJNA224116 SAMN02471632 AOJG00000000.1 reference genome 1227482 368624 Halorubrum lipolyticum DSM 21995 strain=DSM 21995 na latest Contig Major Full 2013-02-04 ASM33737v1 University of California, Davis GCA_000337375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/375/GCF_000337375.1_ASM33737v1/ na assembly from type material na haploid archaea 3425042 3425042 68.000000 0 41 41 NCBI RefSeq GCF_000337375.1-RS_2025_11_20 2025-11-20 3385 3266 54 25393412 GCF_000337395.1 PRJNA224116 SAMN02471646 AOJF00000000.1 reference genome 1227483 29283 Halorubrum distributum JCM 13561 strain=JCM 13561 na latest Contig Major Full 2013-02-04 ASM33739v1 University of California, Davis GCA_000337395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/395/GCF_000337395.1_ASM33739v1/ na assembly from heterotypic synonym type material na haploid archaea 3137757 3137757 69.000000 0 63 63 NCBI RefSeq GCF_000337395.1-RS_2025_11_20 2025-11-20 3164 3051 57 25393412 GCF_000337415.1 PRJNA224116 SAMN02471631 AOJD00000000.1 reference genome 1227485 119434 Halorubrum tebenquichense DSM 14210 strain=DSM 14210 na latest Contig Major Full 2013-02-04 ASM33741v1 University of California, Davis GCA_000337415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/415/GCF_000337415.1_ASM33741v1/ na assembly from type material na haploid archaea 3328860 3328860 68.000000 0 93 93 NCBI RefSeq GCF_000337415.1-RS_2025_11_20 2025-11-20 3447 3296 57 25393412 GCF_000337435.1 PRJNA224116 SAMN02471682 AOIW00000000.1 na 1227486 29283 Halorubrum distributum JCM 10247 strain=JCM 10247 na latest Contig Major Full 2013-02-04 ASM33743v1 University of California, Davis GCA_000337435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/435/GCF_000337435.1_ASM33743v1/ na assembly from heterotypic synonym type material na haploid archaea 3376225 3376225 68.000000 0 79 79 NCBI RefSeq GCF_000337435.1-RS_2025_11_20 2025-11-20 3448 3274 63 25393412 GCF_000337455.1 PRJNA224116 SAMN02471654 AOIU00000000.1 reference genome 797114 171164 Halosimplex carlsbadense 2-9-1 strain=2/9/2001 na latest Contig Major Full 2013-02-04 ASM33745v1 University of California, Davis GCA_000337455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/455/GCF_000337455.1_ASM33745v1/ na assembly from type material na haploid archaea 4694889 4694889 67.500000 0 50 50 NCBI RefSeq GCF_000337455.1-RS_2025_11_21 2025-11-21 4654 4515 59 25393412 GCF_000337475.1 PRJNA224116 SAMN02471681 AOIT00000000.1 reference genome 1230457 370323 Natrinema limicola JCM 13563 strain=JCM 13563 na latest Contig Major Full 2013-02-04 ASM33747v1 University of California, Davis GCA_000337475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/475/GCF_000337475.1_ASM33747v1/ na assembly from type material na haploid archaea 3522035 3522035 62.000000 0 94 94 NCBI RefSeq GCF_000337475.1-RS_2025_11_20 2025-11-20 3647 3438 69 25393412 GCF_000337495.1 PRJNA224116 SAMN02471629 AOIS00000000.1 reference genome 1227488 504937 Haloterrigena salina JCM 13891 strain=JCM 13891 na latest Contig Major Full 2013-02-04 ASM33749v1 University of California, Davis GCA_000337495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/495/GCF_000337495.1_ASM33749v1/ na assembly from type material na haploid archaea 4841607 4841607 65.000000 0 71 71 NCBI RefSeq GCF_000337495.1-RS_2025_11_21 2025-11-21 4678 4465 66 25393412 GCF_000337515.1 PRJNA224116 SAMN02471651 AOIQ00000000.1 reference genome 1227490 332953 Halovivax asiaticus JCM 14624 strain=JCM 14624 na latest Contig Major Full 2013-02-04 ASM33751v1 University of California, Davis GCA_000337515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/515/GCF_000337515.1_ASM33751v1/ na assembly from type material na haploid archaea 3238452 3238452 64.500000 0 24 24 NCBI RefSeq GCF_000337515.1-RS_2025_11_20 2025-11-20 3239 3143 50 25393412 GCF_000337535.1 PRJNA224116 SAMN02471628 AOIP00000000.1 na 1227491 129789 Natrialba aegyptia DSM 13077 strain=DSM 13077 na latest Contig Major Full 2013-02-04 ASM33753v1 University of California, Davis GCA_000337535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/535/GCF_000337535.1_ASM33753v1/ na assembly from type material na haploid archaea 4618362 4618362 62.000000 0 66 66 NCBI RefSeq GCF_000337535.1-RS_2025_12_02 2025-12-02 4558 4310 63 25393412 GCF_000337555.1 PRJNA224116 SAMN02471653 AOIO00000000.1 reference genome 29540 64602 Natrialba asiatica DSM 12278 strain=DSM 12278 na latest Contig Major Full 2013-02-04 ASM33755v1 University of California, Davis GCA_000337555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/555/GCF_000337555.1_ASM33755v1/ na assembly from type material na haploid archaea 4404175 4404175 62.500000 0 49 49 NCBI RefSeq GCF_000337555.1-RS_2025_11_21 2025-11-21 4297 4118 59 25393412 GCF_000337575.1 PRJNA224116 SAMN02471673 AOIM00000000.1 reference genome 1227493 123783 Natrialba hulunbeirensis JCM 10989 strain=JCM 10989 na latest Contig Major Full 2013-02-04 ASM33757v1 University of California, Davis GCA_000337575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/575/GCF_000337575.1_ASM33757v1/ na assembly from type material na haploid archaea 4159606 4159606 61.500000 0 48 48 NCBI RefSeq GCF_000337575.1-RS_2025_11_20 2025-11-20 3976 3818 61 25393412 GCF_000337595.1 PRJNA224116 SAMN02471680 AOIL00000000.1 reference genome 1230458 160846 Natrialba taiwanensis DSM 12281 strain=DSM 12281 na latest Contig Major Full 2013-02-04 ASM33759v1 University of California, Davis GCA_000337595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/595/GCF_000337595.1_ASM33759v1/ na assembly from type material na haploid archaea 4635192 4635192 61.500000 0 70 70 NCBI RefSeq GCF_000337595.1-RS_2025_11_20 2025-11-20 4523 4254 60 25393412 GCF_000337615.1 PRJNA224116 SAMN02471671 AOII00000000.1 na 1227495 69527 Natrinema pallidum DSM 3751 strain=DSM 3751 na latest Contig Major Full 2013-02-04 ASM33761v1 University of California, Davis GCA_000337615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/615/GCF_000337615.1_ASM33761v1/ na assembly from type material na haploid archaea 3915814 3915814 63.500000 0 115 115 NCBI RefSeq GCF_000337615.1-RS_2025_11_21 2025-11-21 3994 3730 62 25393412 GCF_000337635.1 PRJNA224116 SAMN02471626 AOIE00000000.1 na 797303 69525 Natrinema pellirubrum DSM 15624 strain=DSM 15624 na latest Contig Major Full 2013-02-04 ASM33763v1 University of California, Davis GCA_000337635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/635/GCF_000337635.1_ASM33763v1/ na assembly from type material na haploid archaea 4264455 4264455 64.000000 0 134 134 NCBI RefSeq GCF_000337635.1-RS_2025_12_02 2025-12-02 4342 4083 57 25393412 GCF_000337655.1 PRJNA224116 SAMN02471625 AOIC00000000.1 na 797304 44930 Natronobacterium gregoryi SP2 strain=SP2 na latest Contig Major Full 2013-02-04 ASM33765v1 University of California, Davis GCA_000337655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/655/GCF_000337655.1_ASM33765v1/ na assembly from type material na haploid archaea 3694030 3694030 62.500000 0 128 128 NCBI RefSeq GCF_000337655.1-RS_2025_12_03 2025-12-03 3738 3524 51 25393412 GCF_000337675.1 PRJNA224116 SAMN02471669 AOIB00000000.1 reference genome 1227497 44470 Natronococcus amylolyticus DSM 10524 strain=DSM 10524 na latest Contig Major Full 2013-02-04 ASM33767v1 University of California, Davis GCA_000337675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/675/GCF_000337675.1_ASM33767v1/ na assembly from type material na haploid archaea 4416525 4416525 64.500000 0 44 44 NCBI RefSeq GCF_000337675.1-RS_2025_11_20 2025-11-20 4481 4304 58 25393412 GCF_000337695.1 PRJNA224116 SAMN02471624 AOIA00000000.1 reference genome 1227498 413812 Natronococcus jeotgali DSM 18795 strain=DSM 18795 na latest Contig Major Full 2013-02-04 ASM33769v1 University of California, Davis GCA_000337695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/695/GCF_000337695.1_ASM33769v1/ na assembly from type material na haploid archaea 4496185 4496185 64.500000 0 170 170 NCBI RefSeq GCF_000337695.1-RS_2025_11_20 2025-11-20 4614 4320 64 25393412 GCF_000337715.1 PRJNA224116 SAMN02471622 AOHY00000000.1 na 1227500 61858 Natronorubrum bangense JCM 10635 strain=JCM 10635 na latest Contig Major Full 2013-02-04 ASM33771v1 University of California, Davis GCA_000337715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/715/GCF_000337715.1_ASM33771v1/ na assembly from type material na haploid archaea 4111275 4111275 60.500000 0 62 62 NCBI RefSeq GCF_000337715.1-RS_2025_12_02 2025-12-02 4102 3894 61 25393412 GCF_000337735.1 PRJNA224116 SAMN02471621 AOHX00000000.1 reference genome 1230460 388259 Natronorubrum sulfidifaciens JCM 14089 strain=JCM 14089 na latest Contig Major Full 2013-02-04 ASM33773v1 University of California, Davis GCA_000337735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/735/GCF_000337735.1_ASM33773v1/ na assembly from type material na haploid archaea 3460288 3460288 62.000000 0 63 63 NCBI RefSeq GCF_000337735.1-RS_2025_11_21 2025-11-21 3500 3375 55 25393412 GCF_000337755.1 PRJNA224116 SAMN02471658 AOLS00000000.1 na 662475 2238 Haloarcula marismortui ATCC 33799 strain=ATCC 33799 na latest Contig Major Full 2013-02-04 ASM33775v1 University of California, Davis GCA_000337755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/755/GCF_000337755.1_ASM33775v1/ na assembly from heterotypic synonym type material na haploid archaea 4404932 4404932 61.000000 0 133 133 NCBI RefSeq GCF_000337755.1-RS_2025_11_20 2025-11-20 4553 4352 69 25393412 GCF_000337775.1 PRJNA224116 SAMN02471656 AOLQ00000000.1 na 662477 28442 Haloarcula vallismortis ATCC 29715 strain=ATCC 29715 na latest Contig Major Full 2013-02-04 ASM33777v1 University of California, Davis GCA_000337775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/775/GCF_000337775.1_ASM33777v1/ na assembly from type material na haploid archaea 3923205 3923205 62.000000 0 69 69 NCBI RefSeq GCF_000337775.1-RS_2025_12_02 2025-12-02 4095 3977 77 25393412 GCF_000337795.1 PRJNA224116 SAMN02471644 AOLP00000000.1 reference genome 662478 35745 Haloferax denitrificans ATCC 35960 strain=ATCC 35960 na latest Contig Major Full 2013-02-04 ASM33779v1 University of California, Davis GCA_000337795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/795/GCF_000337795.1_ASM33779v1/ na assembly from type material na haploid archaea 3825973 3825973 66.500000 0 21 21 NCBI RefSeq GCF_000337795.1-RS_2025_11_20 2025-11-20 3885 3760 58 25393412 GCF_000337815.1 PRJNA224116 SAMN02471642 AOLN00000000.1 reference genome 662479 403181 Haloferax mucosum ATCC BAA-1512 strain=ATCC BAA-1512 na latest Contig Major Full 2013-02-04 ASM33781v1 University of California, Davis GCA_000337815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/815/GCF_000337815.1_ASM33781v1/ na assembly from type material na haploid archaea 3368982 3368982 62.000000 0 20 20 NCBI RefSeq GCF_000337815.1-RS_2025_11_21 2025-11-21 3484 3392 60 25393412 GCF_000337835.1 PRJNA224116 SAMN02471686 AOLM00000000.1 na 662480 255616 Haloferax sulfurifontis ATCC BAA-897 strain=ATCC BAA-897 na latest Contig Major Full 2013-02-04 ASM33783v1 University of California, Davis GCA_000337835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/835/GCF_000337835.1_ASM33783v1/ na assembly from type material na haploid archaea 3812428 3812428 66.500000 0 29 29 NCBI RefSeq GCF_000337835.1-RS_2025_11_20 2025-11-20 3939 3791 58 25393412 GCF_000337855.1 PRJNA224116 SAMN02471667 AOHT00000000.1 na 469382 60847 Halogeometricum borinquense DSM 11551 strain=DSM 11551 na latest Contig Major Full 2013-02-04 ASM33785v1 University of California, Davis GCA_000337855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/855/GCF_000337855.1_ASM33785v1/ na assembly from type material na haploid archaea 3928510 3928510 60.000000 0 56 56 NCBI RefSeq GCF_000337855.1-RS_2025_11_20 2025-11-20 3957 3815 64 25393412 GCF_000337875.1 PRJNA224116 SAMN02471679 AOHS00000000.1 na 547559 13769 Natrialba magadii ATCC 43099 strain=MS-3 na latest Contig Major Full 2013-02-04 ASM33787v1 University of California, Davis GCA_000337875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/875/GCF_000337875.1_ASM33787v1/ na assembly from type material na haploid archaea 4416299 4416299 61.000000 0 66 66 NCBI RefSeq GCF_000337875.1-RS_2025_12_01 2025-12-01 4281 4109 56 25393412 GCF_000337895.1 PRJNA224116 SAMN02471660 AOMA00000000.1 reference genome 1227454 130048 Halobiforma nitratireducens JCM 10879 strain=JCM 10879 na latest Contig Major Full 2013-02-04 ASM33789v1 University of California, Davis GCA_000337895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/895/GCF_000337895.1_ASM33789v1/ na assembly from type material na haploid archaea 3688747 3688747 63.500000 0 205 205 NCBI RefSeq GCF_000337895.1-RS_2025_12_01 2025-12-01 3650 3425 51 25393412 GCF_000337915.1 PRJNA224116 SAMN02471663 AOJE00000000.1 reference genome 1227484 2248 Halorubrum saccharovorum DSM 1137 strain=DSM 1137 na latest Contig Major Full 2013-02-04 ASM33791v1 University of California, Davis GCA_000337915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/337/915/GCF_000337915.1_ASM33791v1/ na assembly from type material na haploid archaea 3423703 3423703 67.000000 0 72 72 NCBI RefSeq GCF_000337915.1-RS_2025_11_20 2025-11-20 3414 3259 59 25393412 GCF_000338055.1 PRJNA224116 SAMN01922053 AORC00000000.1 na 1249481 219301 Brachybacterium muris UCD-AY4 strain=UCD-AY4 na latest Scaffold Major Full 2013-02-05 Brachybacterium muris str. UCD-AY4 UC Davis Genome Center GCA_000338055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/055/GCF_000338055.1_Brachybacterium_muris_str._UCD-AY4/ na na na haploid bacteria 3257466 3257338 70.000000 0 42 45 NCBI RefSeq GCF_000338055.1-RS_2025_08_20 2025-08-20 2988 2863 57 23516213 GCF_000338075.1 PRJNA224116 SAMN02469666 ANNB00000000.1 na 1224154 666 Vibrio cholerae O1 str. Inaba G4222 strain=Inaba G4222 na latest Chromosome Major Full 2013-02-06 G4222_chroI_and_II CSIR GCA_000338075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/075/GCF_000338075.1_G4222_chroI_and_II/ na na na haploid bacteria 4202811 4200711 47.500000 2 2 21 NCBI RefSeq GCF_000338075.1-RS_2026_02_15 2026-02-15 3822 3687 80 23516184 GCF_000338095.1 PRJNA224116 SAMN02603063 na na 1267754 43771 Corynebacterium urealyticum DSM 7111 strain=DSM 7111 na latest Complete Genome Major Full 2013-02-06 ASM33809v1 Center for Biotechnology GCA_000338095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/095/GCF_000338095.1_ASM33809v1/ na na na haploid bacteria 2316065 2316065 64.000000 1 1 1 NCBI RefSeq GCF_000338095.1-RS_2026_02_02 2026-02-02 2040 1907 66 23704183 GCF_000338115.2 PRJNA224116 SAMN02604341 na na 1284663 1590 Lactiplantibacillus plantarum ZJ316 strain=ZJ316 na latest Complete Genome Major Full 2013-07-31 ASM33811v2 Zhejiang Gongshang University GCA_000338115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/115/GCF_000338115.2_ASM33811v2/ na na na haploid bacteria 3299755 3299755 44.500000 4 4 4 NCBI RefSeq GCF_000338115.2-RS_2026_04_29 2026-04-29 3143 2993 82 23516215 GCF_000338215.2 PRJNA224116 SAMN02469778 ANHS00000000.1 na 1258564 666 Vibrio cholerae P-18785 strain=P-18785 na latest Contig Minor Full 2013-02-06 vcp18785v1 Central Research Institute for Epidemiology GCA_000338215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/215/GCF_000338215.2_vcp18785v1/ na na na haploid bacteria 3978895 3978895 47.500000 0 158 158 NCBI RefSeq GCF_000338215.2-RS_2025_12_03 2025-12-03 3626 3526 71 23969060 GCF_000338255.1 PRJNA224116 SAMN02471933 AOIZ00000000.1 na 1267897 573 Klebsiella pneumoniae hvKP1 strain=hvKP1 na latest Contig Major Full 2013-02-07 KP1_contigs_1-272 University of Rochester School of Medicine and Dentistry GCA_000338255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/255/GCF_000338255.1_KP1_contigs_1-272/ na na na haploid bacteria 5368567 5368567 57.500000 0 272 272 NCBI RefSeq GCF_000338255.1-RS_2025_08_14 2025-08-14 5308 5121 39 23516199 GCF_000338295.1 PRJNA224116 SAMN02261079 ANMO00000000.1 reference genome 1263867 1263866 Rhodopirellula europaea 6C strain=6C na latest Contig Major Full 2013-02-07 First Microbial Interactions in MArine Systems (MIMAS) GCA_000338295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/295/GCF_000338295.1_First/ na assembly from type material na haploid bacteria 7191307 7191307 55.500000 0 273 273 NCBI RefSeq GCF_000338295.1-RS_2025_12_12 2025-12-12 5453 5290 75 23273849 GCF_000338455.1 PRJNA224116 SAMN02596726 AGEA00000000.1 na 999438 158 Treponema denticola SP37 strain=SP37 na latest Scaffold Major Full 2013-09-03 Trep_dent_SP37_V1 Broad Institute GCA_000338455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/455/GCF_000338455.1_Trep_dent_SP37_V1/ na na na haploid bacteria 2823766 2805165 38.000000 0 2 28 NCBI RefSeq GCF_000338455.1-RS_2025_07_04 2025-07-04 2655 2559 53 na GCF_000338475.1 PRJNA224116 SAMN02596725 AGDZ00000000.1 na 999437 158 Treponema denticola SP33 strain=SP33 na latest Scaffold Major Full 2013-09-03 Trep_dent_SP33_V1 Broad Institute GCA_000338475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/475/GCF_000338475.1_Trep_dent_SP33_V1/ na na na haploid bacteria 2933485 2921808 38.000000 0 4 40 NCBI RefSeq GCF_000338475.1-RS_2025_07_04 2025-07-04 2770 2671 53 na GCF_000338515.1 PRJNA224116 SAMN02596723 AGDX00000000.1 na 999433 158 Treponema denticola MYR-T strain=MYR-T na latest Scaffold Major Full 2013-09-03 Trep_dent_MYR-T_V1 Broad Institute GCA_000338515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/515/GCF_000338515.1_Trep_dent_MYR-T_V1/ na na na haploid bacteria 2935848 2928435 38.000000 0 2 22 NCBI RefSeq GCF_000338515.1-RS_2025_07_04 2025-07-04 2764 2672 53 na GCF_000338595.1 PRJNA224116 SAMN02596719 AGDT00000000.1 na 999429 158 Treponema denticola ATCC 33521 strain=ATCC 33521 na latest Scaffold Major Full 2013-09-04 Trep_dent_ATCC_33521_V1 Broad Institute GCA_000338595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/595/GCF_000338595.1_Trep_dent_ATCC_33521_V1/ na na na haploid bacteria 2762110 2750006 38.000000 0 3 25 NCBI RefSeq GCF_000338595.1-RS_2025_07_04 2025-07-04 2555 2438 53 na GCF_000338615.1 PRJNA224116 SAMN02596718 AGDS00000000.1 na 999428 158 Treponema denticola ATCC 33520 strain=ATCC 33520 na latest Scaffold Major Full 2013-09-03 Trep_dent_ATCC_33520_V1 Broad Institute GCA_000338615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/615/GCF_000338615.1_Trep_dent_ATCC_33520_V1/ na na na haploid bacteria 2886890 2872122 38.000000 0 2 25 NCBI RefSeq GCF_000338615.1-RS_2025_07_04 2025-07-04 2683 2584 53 na GCF_000338635.1 PRJNA224116 SAMN02596717 AGDR00000000.1 na 999427 158 Treponema denticola ASLM strain=ASLM na latest Scaffold Major Full 2013-02-20 Trep_dent_ASLM_V1 Broad Institute GCA_000338635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/635/GCF_000338635.1_Trep_dent_ASLM_V1/ na na na haploid bacteria 2768236 2751231 38.000000 0 2 43 NCBI RefSeq GCF_000338635.1-RS_2025_07_04 2025-07-04 2607 2510 52 na GCF_000338715.2 PRJNA224116 SAMN02603488 na na 1206780 1773 Mycobacterium tuberculosis variant bovis BCG str. Korea 1168P strain=Korea 1168P na latest Complete Genome Major Full 2013-03-08 ASM33871v2 Korean Institute of Tuberculosis GCA_000338715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/715/GCF_000338715.2_ASM33871v2/ na na na haploid bacteria 4376711 4376711 65.500000 1 1 1 NCBI RefSeq GCF_000338715.2-RS_2025_05_21 2025-05-21 4120 3823 51 23516200 GCF_000338735.1 PRJNA224116 SAMN02602961 na na 1233100 1423 Bacillus subtilis XF-1 strain=XF-1 na latest Complete Genome Major Full 2013-02-08 ASM33873v1 Yunnan Agricultural University GCA_000338735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/735/GCF_000338735.1_ASM33873v1/ na na na haploid bacteria 4061186 4061186 44.000000 1 1 1 NCBI RefSeq GCF_000338735.1-RS_2025_05_21 2025-05-21 4192 3924 108 23558530 GCF_000338755.1 PRJNA224116 SAMN02603412 na na 1279365 1428 Bacillus thuringiensis serovar kurstaki str. HD73 strain=HD73 na latest Complete Genome Major Full 2013-02-08 ASM33875v1 Institute of Plant Protection, Chinese Academy of Agricultural Sciences GCA_000338755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/755/GCF_000338755.1_ASM33875v1/ na na na haploid bacteria 5908575 5908575 35.000000 8 8 8 NCBI RefSeq GCF_000338755.1-RS_2026_05_01 2026-05-01 6172 5677 145 23516207 GCF_000338775.1 PRJNA224116 SAMN02604153 na na 1028567 2285 Sulfolobus acidocaldarius Ron12/I strain=Ron12/I na latest Complete Genome Major Full 2013-02-08 ASM33877v1 University of Cincinnati GCA_000338775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/775/GCF_000338775.1_ASM33877v1/ na na na haploid archaea 2223983 2223983 36.500000 1 1 1 NCBI RefSeq GCF_000338775.1-RS_2026_03_31 2026-03-31 2369 2286 51 22418622 GCF_000338835.1 PRJNA224116 SAMN02471175 AOLU00000000.1 na 1222032 470 Acinetobacter baumannii AB4A3 strain=AB4A3 na latest Contig Major Full 2013-02-08 454 The University of Hong Kong GCA_000338835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/835/GCF_000338835.1_454/ na na na haploid bacteria 4104065 4104065 39.000000 0 136 136 NCBI RefSeq GCF_000338835.1-RS_2025_09_10 2025-09-10 4070 3834 77 23723398 GCF_000338875.1 PRJNA224116 SAMN02469605 AOMO00000000.1 na 1259812 674 Vibrio mimicus CAIM 602 strain=CAIM 602 na latest Contig Major Full 2013-02-08 CAIM_602T_1.0 CIAD, A.C. GCA_000338875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/875/GCF_000338875.1_CAIM_602T_1.0/ na assembly from type material na haploid bacteria 4320286 4320286 46.500000 0 120 120 NCBI RefSeq GCF_000338875.1-RS_2026_04_03 2026-04-03 4043 3651 99 23516211 GCF_000338955.1 PRJNA245120 SAMN02981283 AEIF00000000.1 reference genome 717646 1709381 Baudoinia panamericana UAMH 10762 strain=UAMH 10762 na latest Scaffold Major Full 2013-02-11 Bauco1 JGI GCA_000338955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/955/GCF_000338955.1_Bauco1/ na assembly from type material na haploid fungi 21875620 21865565 55.000000 0 19 36 JGI Annotation submitted by JGI 2020-02-03 10541 10500 38 23236275 GCF_000338995.1 PRJNA245122 SAMN02981285 AEIN00000000.1 reference genome 665912 45130 Bipolaris sorokiniana ND90Pr strain=ND90Pr na latest Scaffold Major Full 2013-02-19 Cocsa1 JGI GCA_000338995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/338/995/GCF_000338995.1_Cocsa1/ na na na haploid fungi 34409167 33212626 50.000000 0 154 504 JGI Annotation submitted by JGI 2020-02-06 12304 12210 92 23236275 GCF_000339015.1 PRJNA224116 SAMN02604116 na na 956149 28141 Cronobacter sakazakii SP291 strain=Sp291 na latest Complete Genome Major Full 2013-02-11 ASM33901v1 University College Dublin GCA_000339015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/015/GCF_000339015.1_ASM33901v1/ na na na haploid bacteria 4518784 4518784 57.000000 4 4 4 NCBI RefSeq GCF_000339015.1-RS_2026_04_27 2026-04-27 4337 4140 114 23516209 GCF_000339035.1 PRJNA224116 SAMN02469926 ANIV00000000.1 na 1188246 2102 Mycoplasma mycoides subsp. capri PG3 strain=PG3 na latest Scaffold Major Full 2013-02-19 ASM33903v1 Inner Mongolia agricultural university GCA_000339035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/035/GCF_000339035.1_ASM33903v1/ na assembly from type material na haploid bacteria 1025098 1023884 23.500000 0 9 22 NCBI RefSeq GCF_000339035.1-RS_2026_02_26 2026-02-26 867 815 34 na GCF_000339055.1 PRJNA224116 SAMN02428982 AHRC00000000.1 na 857105 1309 Streptococcus mutans S1B strain=S1B na latest Contig Major Full 2013-02-11 ASM33905v1 Cornell University GCA_000339055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/055/GCF_000339055.1_ASM33905v1/ na na na haploid bacteria 2006359 2006359 37.000000 0 132 132 NCBI RefSeq GCF_000339055.1-RS_2026_03_28 2026-03-28 2004 1887 40 23228887 GCF_000339075.1 PRJNA224116 SAMN02429080 AHRE00000000.1 na 857103 1309 Streptococcus mutans SA41 strain=SA41 na latest Contig Major Full 2013-02-11 ASM33907v1 Cornell University GCA_000339075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/075/GCF_000339075.1_ASM33907v1/ na na na haploid bacteria 1952324 1952324 37.000000 0 104 104 NCBI RefSeq GCF_000339075.1-RS_2026_03_21 2026-03-21 1935 1829 36 23228887 GCF_000339095.1 PRJNA224116 SAMN02429033 AHRF00000000.1 na 857102 1309 Streptococcus mutans SF12 strain=SF12 na latest Contig Major Full 2013-02-11 ASM33909v1 Cornell University GCA_000339095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/095/GCF_000339095.1_ASM33909v1/ na na na haploid bacteria 1925888 1925888 37.000000 0 107 107 NCBI RefSeq GCF_000339095.1-RS_2026_03_21 2026-03-21 1929 1833 35 23228887 GCF_000339115.1 PRJNA224116 SAMN02429034 AHRG00000000.1 na 857101 1309 Streptococcus mutans R221 strain=R221 na latest Contig Major Full 2013-02-11 ASM33911v1 Cornell University GCA_000339115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/115/GCF_000339115.1_ASM33911v1/ na na na haploid bacteria 1983724 1983724 37.000000 0 109 109 NCBI RefSeq GCF_000339115.1-RS_2026_03_21 2026-03-21 1977 1873 35 23228887 GCF_000339135.1 PRJNA224116 SAMN02428927 AHRH00000000.1 na 857100 1309 Streptococcus mutans M230 strain=M230 na latest Contig Major Full 2013-02-11 ASM33913v1 Cornell University GCA_000339135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/135/GCF_000339135.1_ASM33913v1/ na na na haploid bacteria 1917450 1917450 37.000000 0 139 139 NCBI RefSeq GCF_000339135.1-RS_2026_03_28 2026-03-28 1899 1785 35 23228887 GCF_000339155.1 PRJNA224116 SAMN02429081 AHRJ00000000.1 na 857152 1309 Streptococcus mutans 15JP3 strain=15JP3 na latest Contig Major Full 2013-02-11 ASM33915v1 Cornell University GCA_000339155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/155/GCF_000339155.1_ASM33915v1/ na na na haploid bacteria 1932974 1932974 37.000000 0 87 87 NCBI RefSeq GCF_000339155.1-RS_2026_03_28 2026-03-28 1926 1839 35 23228887 GCF_000339175.1 PRJNA224116 SAMN02429083 AHRL00000000.1 na 857150 1309 Streptococcus mutans 4SM1 strain=4SM1 na latest Contig Major Full 2013-02-11 ASM33917v1 Cornell University GCA_000339175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/175/GCF_000339175.1_ASM33917v1/ na na na haploid bacteria 2005341 2005341 36.500000 0 97 97 NCBI RefSeq GCF_000339175.1-RS_2026_03_21 2026-03-21 1928 1842 35 23228887 GCF_000339195.1 PRJNA224116 SAMN02428984 AHRN00000000.1 na 857148 1309 Streptococcus mutans 2ST1 strain=2ST1 na latest Contig Major Full 2013-02-11 ASM33919v1 Cornell University GCA_000339195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/195/GCF_000339195.1_ASM33919v1/ na na na haploid bacteria 1965562 1965562 36.500000 0 111 111 NCBI RefSeq GCF_000339195.1-RS_2026_03_21 2026-03-21 1940 1853 37 23228887 GCF_000339215.1 PRJNA224116 SAMN02429085 AHRQ00000000.1 na 857146 1309 Streptococcus mutans 4VF1 strain=4VF1 na latest Contig Major Full 2013-02-11 ASM33921v1 Cornell University GCA_000339215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/215/GCF_000339215.1_ASM33921v1/ na na na haploid bacteria 2008731 2008731 36.500000 0 127 127 NCBI RefSeq GCF_000339215.1-RS_2025_12_27 2025-12-27 1928 1815 35 23228887 GCF_000339235.1 PRJNA224116 SAMN02429086 AHRR00000000.1 na 857145 1309 Streptococcus mutans 15VF2 strain=15VF2 na latest Contig Major Full 2013-02-11 ASM33923v1 Cornell University GCA_000339235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/235/GCF_000339235.1_ASM33923v1/ na na na haploid bacteria 2021665 2021665 36.500000 0 117 117 NCBI RefSeq GCF_000339235.1-RS_2026_03_28 2026-03-28 1941 1831 37 23228887 GCF_000339275.1 PRJNA224116 SAMN02428985 AHRU00000000.1 na 857142 1309 Streptococcus mutans 5SM3 strain=5SM3 na latest Contig Major Full 2013-02-11 ASM33927v1 Cornell University GCA_000339275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/275/GCF_000339275.1_ASM33927v1/ na na na haploid bacteria 1943643 1943643 37.000000 0 86 86 NCBI RefSeq GCF_000339275.1-RS_2026_03_28 2026-03-28 1911 1798 37 23228887 GCF_000339295.1 PRJNA224116 SAMN02428986 AHRV00000000.1 na 857141 1309 Streptococcus mutans NFSM2 strain=NFSM2 na latest Contig Major Full 2013-02-11 ASM33929v1 Cornell University GCA_000339295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/295/GCF_000339295.1_ASM33929v1/ na na na haploid bacteria 1990978 1990978 36.500000 0 115 115 NCBI RefSeq GCF_000339295.1-RS_2026_03_21 2026-03-21 1961 1850 35 23228887 GCF_000339315.1 PRJNA224116 SAMN02429025 AHRX00000000.1 na 857139 1309 Streptococcus mutans A9 strain=A9 na latest Contig Major Full 2013-02-11 ASM33931v1 Cornell University GCA_000339315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/315/GCF_000339315.1_ASM33931v1/ na na na haploid bacteria 1868494 1868494 37.000000 0 105 105 NCBI RefSeq GCF_000339315.1-RS_2025_12_27 2025-12-27 1875 1779 35 23228887 GCF_000339335.1 PRJNA224116 SAMN02429072 AHRY00000000.1 na 857138 1309 Streptococcus mutans N29 strain=N29 na latest Contig Major Full 2013-02-11 ASM33933v1 Cornell University GCA_000339335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/335/GCF_000339335.1_ASM33933v1/ na na na haploid bacteria 1965509 1965509 37.000000 0 110 110 NCBI RefSeq GCF_000339335.1-RS_2026_03_28 2026-03-28 1933 1800 36 23228887 GCF_000339355.1 PRJNA224116 SAMN02429073 AHRZ00000000.1 na 857137 1309 Streptococcus mutans NMT4863 strain=NMT4863 na latest Contig Major Full 2013-02-11 ASM33935v1 Cornell University GCA_000339355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/355/GCF_000339355.1_ASM33935v1/ na na na haploid bacteria 1926604 1926604 37.000000 0 97 97 NCBI RefSeq GCF_000339355.1-RS_2026_03_28 2026-03-28 1899 1796 35 23228887 GCF_000339375.1 PRJNA224116 SAMN02429026 AHSE00000000.1 na 857132 1309 Streptococcus mutans T4 strain=T4 na latest Contig Major Full 2013-02-11 ASM33937v1 Cornell University GCA_000339375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/375/GCF_000339375.1_ASM33937v1/ na na na haploid bacteria 1966047 1966047 36.500000 0 113 113 NCBI RefSeq GCF_000339375.1-RS_2026_03_28 2026-03-28 1940 1842 35 23228887 GCF_000339395.1 PRJNA224116 SAMN02429027 AHSG00000000.1 na 857130 1309 Streptococcus mutans NFSM1 strain=NFSM1 na latest Contig Major Full 2013-02-11 ASM33939v1 Cornell University GCA_000339395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/395/GCF_000339395.1_ASM33939v1/ na na na haploid bacteria 2002107 2002107 37.000000 0 131 131 NCBI RefSeq GCF_000339395.1-RS_2025_12_22 2025-12-22 2002 1882 38 23228887 GCF_000339415.1 PRJNA224116 SAMN02429029 AHSN00000000.1 na 857123 1309 Streptococcus mutans NV1996 strain=NV1996 na latest Contig Major Full 2013-02-11 ASM33941v1 Cornell University GCA_000339415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/415/GCF_000339415.1_ASM33941v1/ na na na haploid bacteria 2015161 2015161 37.000000 0 130 130 NCBI RefSeq GCF_000339415.1-RS_2025_12_26 2025-12-26 2010 1886 34 23228887 GCF_000339435.1 PRJNA224116 SAMN02429031 AHSQ00000000.1 na 857120 1309 Streptococcus mutans SF14 strain=SF14 na latest Contig Major Full 2013-02-11 ASM33943v1 Cornell University GCA_000339435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/435/GCF_000339435.1_ASM33943v1/ na na na haploid bacteria 1944789 1944789 37.000000 0 97 97 NCBI RefSeq GCF_000339435.1-RS_2026_03_28 2026-03-28 1932 1822 35 23228887 GCF_000339455.1 PRJNA224116 SAMN02429032 AHSR00000000.1 na 857119 1309 Streptococcus mutans SM6 strain=SM6 na latest Contig Major Full 2013-02-11 ASM33945v1 Cornell University GCA_000339455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/455/GCF_000339455.1_ASM33945v1/ na na na haploid bacteria 1960471 1960471 37.000000 0 112 112 NCBI RefSeq GCF_000339455.1-RS_2026_03_28 2026-03-28 1927 1822 35 23228887 GCF_000339475.1 PRJNA224116 SAMN02428977 AHSU00000000.1 na 857116 1309 Streptococcus mutans U2A strain=U2A na latest Contig Major Full 2013-02-11 ASM33947v1 Cornell University GCA_000339475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/475/GCF_000339475.1_ASM33947v1/ na na na haploid bacteria 2099425 2099425 37.000000 0 163 163 NCBI RefSeq GCF_000339475.1-RS_2026_03_28 2026-03-28 2073 1949 35 23228887 GCF_000339495.1 PRJNA224116 SAMN02429068 AHSV00000000.1 na 857115 1309 Streptococcus mutans NLML8 strain=NLML8 na latest Contig Major Full 2013-02-11 ASM33949v1 Cornell University GCA_000339495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/495/GCF_000339495.1_ASM33949v1/ na na na haploid bacteria 1963147 1963147 37.000000 0 135 135 NCBI RefSeq GCF_000339495.1-RS_2026_03_21 2026-03-21 1939 1818 35 23228887 GCF_000339515.1 PRJNA224116 SAMN02429069 AHSY00000000.1 na 857113 1309 Streptococcus mutans 14D strain=14D na latest Contig Major Full 2013-02-11 ASM33951v1 Cornell University GCA_000339515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/515/GCF_000339515.1_ASM33951v1/ na na na haploid bacteria 1969096 1969096 36.500000 0 102 102 NCBI RefSeq GCF_000339515.1-RS_2026_03_21 2026-03-21 1943 1849 35 23228887 GCF_000339535.1 PRJNA224116 SAMN02428978 AHSZ00000000.1 na 857112 1309 Streptococcus mutans 21 strain=21 na latest Contig Major Full 2013-02-11 ASM33953v1 Cornell University GCA_000339535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/535/GCF_000339535.1_ASM33953v1/ na na na haploid bacteria 1990074 1990074 36.500000 0 120 120 NCBI RefSeq GCF_000339535.1-RS_2026_03_28 2026-03-28 1977 1885 35 23228887 GCF_000339555.1 PRJNA224116 SAMN02429070 AHTB00000000.1 na 857110 1309 Streptococcus mutans B strain=B na latest Contig Major Full 2013-02-11 ASM33955v1 Cornell University GCA_000339555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/555/GCF_000339555.1_ASM33955v1/ na na na haploid bacteria 1948124 1948124 36.500000 0 111 111 NCBI RefSeq GCF_000339555.1-RS_2026_03_28 2026-03-28 1928 1830 35 23228887 GCF_000339575.1 PRJNA224116 SAMN02428981 AHTD00000000.1 na 857108 1309 Streptococcus mutans SM1 strain=SM1 na latest Contig Major Full 2013-02-11 ASM33957v1 Cornell University GCA_000339575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/575/GCF_000339575.1_ASM33957v1/ na na na haploid bacteria 1994929 1994929 36.500000 0 114 114 NCBI RefSeq GCF_000339575.1-RS_2026_03_28 2026-03-28 1970 1864 35 23228887 GCF_000339595.1 PRJNA224116 SAMN02429079 AHRB00000000.1 na 857153 1309 Streptococcus mutans 8ID3 strain=8ID3 na latest Contig Major Full 2013-02-11 ASM33959v1 Cornell University GCA_000339595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/595/GCF_000339595.1_ASM33959v1/ na na na haploid bacteria 1908740 1908740 37.000000 0 100 100 NCBI RefSeq GCF_000339595.1-RS_2026_03_21 2026-03-21 1892 1792 35 23228887 GCF_000339615.1 PRJNA224116 SAMN02428983 AHRD00000000.1 na 857104 1309 Streptococcus mutans SA38 strain=SA38 na latest Contig Major Full 2013-02-11 ASM33961v1 Cornell University GCA_000339615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/615/GCF_000339615.1_ASM33961v1/ na na na haploid bacteria 1992890 1992890 36.500000 0 91 91 NCBI RefSeq GCF_000339615.1-RS_2026_03_21 2026-03-21 1904 1810 35 23228887 GCF_000339635.1 PRJNA224116 SAMN02429035 AHRI00000000.1 na 857099 1309 Streptococcus mutans OMZ175 strain=OMZ175 na latest Contig Major Full 2013-02-11 ASM33963v1 Cornell University GCA_000339635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/635/GCF_000339635.1_ASM33963v1/ na na na haploid bacteria 2003229 2003229 37.000000 0 130 130 NCBI RefSeq GCF_000339635.1-RS_2026_03_28 2026-03-28 1994 1872 38 23228887 GCF_000339655.1 PRJNA224116 SAMN02429082 AHRK00000000.1 na 857151 1309 Streptococcus mutans 1SM1 strain=1SM1 na latest Contig Major Full 2013-02-11 ASM33965v1 Cornell University GCA_000339655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/655/GCF_000339655.1_ASM33965v1/ na na na haploid bacteria 2068485 2068485 36.500000 0 102 102 NCBI RefSeq GCF_000339655.1-RS_2026_03_28 2026-03-28 1978 1871 35 23228887 GCF_000339675.1 PRJNA224116 SAMN02429036 AHRM00000000.1 na 857149 1309 Streptococcus mutans 3SN1 strain=3SN1 na latest Contig Major Full 2013-02-11 ASM33967v1 Cornell University GCA_000339675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/675/GCF_000339675.1_ASM33967v1/ na na na haploid bacteria 2034346 2034346 37.000000 0 142 142 NCBI RefSeq GCF_000339675.1-RS_2026_03_28 2026-03-28 2038 1905 35 23228887 GCF_000339695.1 PRJNA224116 SAMN02429037 AHRO00000000.1 na 857155 1309 Streptococcus mutans 11A1 strain=11A1 na latest Contig Major Full 2013-02-11 ASM33969v1 Cornell University GCA_000339695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/695/GCF_000339695.1_ASM33969v1/ na na na haploid bacteria 1921647 1921647 37.000000 0 111 111 NCBI RefSeq GCF_000339695.1-RS_2026_03_21 2026-03-21 1914 1810 35 23228887 GCF_000339715.1 PRJNA224116 SAMN02429084 AHRP00000000.1 na 857147 1309 Streptococcus mutans 11SSST2 strain=11SSST2 na latest Contig Major Full 2013-02-11 ASM33971v1 Cornell University GCA_000339715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/715/GCF_000339715.1_ASM33971v1/ na na na haploid bacteria 1969615 1969615 36.500000 0 105 105 NCBI RefSeq GCF_000339715.1-RS_2026_03_21 2026-03-21 1952 1839 39 23228887 GCF_000339735.1 PRJNA224116 SAMN02429071 AHRS00000000.1 na 857144 1309 Streptococcus mutans 2VS1 strain=2VS1 na latest Contig Major Full 2013-02-11 ASM33973v1 Cornell University GCA_000339735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/735/GCF_000339735.1_ASM33973v1/ na na na haploid bacteria 1970005 1970005 36.500000 0 98 98 NCBI RefSeq GCF_000339735.1-RS_2026_03_28 2026-03-28 1951 1847 34 23228887 GCF_000339755.1 PRJNA224116 SAMN02428929 AHRW00000000.1 na 857140 1309 Streptococcus mutans NVAB strain=NVAB na latest Contig Major Full 2013-02-11 ASM33975v1 Cornell University GCA_000339755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/755/GCF_000339755.1_ASM33975v1/ na na na haploid bacteria 1944173 1944173 37.000000 0 102 102 NCBI RefSeq GCF_000339755.1-RS_2026_03_28 2026-03-28 1948 1855 35 23228887 GCF_000339775.1 PRJNA224116 SAMN02428930 AHSA00000000.1 na 857136 1309 Streptococcus mutans A19 strain=A19 na latest Contig Major Full 2013-02-11 ASM33977v1 Cornell University GCA_000339775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/775/GCF_000339775.1_ASM33977v1/ na na na haploid bacteria 1984020 1984020 36.500000 0 108 108 NCBI RefSeq GCF_000339775.1-RS_2026_03_28 2026-03-28 1969 1856 35 23228887 GCF_000339795.1 PRJNA224116 SAMN02429074 AHSB00000000.1 na 857135 1309 Streptococcus mutans U138 strain=U138 na latest Contig Major Full 2013-02-11 ASM33979v1 Cornell University GCA_000339795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/795/GCF_000339795.1_ASM33979v1/ na na na haploid bacteria 1991956 1991956 36.500000 0 153 153 NCBI RefSeq GCF_000339795.1-RS_2026_03_21 2026-03-21 1977 1855 43 23228887 GCF_000339815.1 PRJNA224116 SAMN02428931 AHSC00000000.1 na 857134 1309 Streptococcus mutans G123 strain=G123 na latest Contig Major Full 2013-02-11 ASM33981v1 Cornell University GCA_000339815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/815/GCF_000339815.1_ASM33981v1/ na na na haploid bacteria 1977039 1977039 36.500000 0 122 122 NCBI RefSeq GCF_000339815.1-RS_2026_03_21 2026-03-21 1948 1844 35 23228887 GCF_000339835.1 PRJNA224116 SAMN02429075 AHSD00000000.1 na 857133 1309 Streptococcus mutans M21 strain=M21 na latest Contig Major Full 2013-02-11 ASM33983v1 Cornell University GCA_000339835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/835/GCF_000339835.1_ASM33983v1/ na na na haploid bacteria 1961974 1961974 37.000000 0 106 106 NCBI RefSeq GCF_000339835.1-RS_2026_03_28 2026-03-28 1937 1833 35 23228887 GCF_000339855.1 PRJNA224116 SAMN02428987 AHSF00000000.1 na 857131 1309 Streptococcus mutans N34 strain=N34 na latest Contig Major Full 2013-02-11 ASM33985v1 Cornell University GCA_000339855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/855/GCF_000339855.1_ASM33985v1/ na na na haploid bacteria 1962026 1962026 37.000000 0 102 102 NCBI RefSeq GCF_000339855.1-RS_2026_03_28 2026-03-28 1934 1825 35 23228887 GCF_000339875.1 PRJNA224116 SAMN02429028 AHSH00000000.1 na 857129 1309 Streptococcus mutans NLML4 strain=NLML4 na latest Contig Major Full 2013-02-11 ASM33987v1 Cornell University GCA_000339875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/875/GCF_000339875.1_ASM33987v1/ na na na haploid bacteria 1968630 1968630 36.500000 0 116 116 NCBI RefSeq GCF_000339875.1-RS_2026_03_28 2026-03-28 1952 1845 35 23228887 GCF_000339895.1 PRJNA224116 SAMN02428932 AHSI00000000.1 na 857128 1309 Streptococcus mutans NLML5 strain=NLML5 na latest Contig Major Full 2013-02-11 ASM33989v1 Cornell University GCA_000339895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/895/GCF_000339895.1_ASM33989v1/ na na na haploid bacteria 1941389 1941389 37.000000 0 105 105 NCBI RefSeq GCF_000339895.1-RS_2026_03_21 2026-03-21 1908 1794 35 23228887 GCF_000339915.1 PRJNA224116 SAMN02429076 AHSJ00000000.1 na 857127 1309 Streptococcus mutans NLML9 strain=NLML9 na latest Contig Major Full 2013-02-11 ASM33991v1 Cornell University GCA_000339915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/915/GCF_000339915.1_ASM33991v1/ na na na haploid bacteria 1996009 1996009 36.500000 0 99 99 NCBI RefSeq GCF_000339915.1-RS_2025_08_20 2025-08-20 1979 1878 34 23228887 GCF_000339935.1 PRJNA224116 SAMN02428988 AHSK00000000.1 na 857126 1309 Streptococcus mutans M2A strain=M2A na latest Contig Major Full 2013-02-11 ASM33993v1 Cornell University GCA_000339935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/935/GCF_000339935.1_ASM33993v1/ na na na haploid bacteria 1930238 1930238 37.000000 0 115 115 NCBI RefSeq GCF_000339935.1-RS_2026_03_21 2026-03-21 1935 1834 35 23228887 GCF_000339955.1 PRJNA224116 SAMN02429077 AHSL00000000.1 na 857125 1309 Streptococcus mutans N3209 strain=N3209 na latest Contig Major Full 2013-02-11 ASM33995v1 Cornell University GCA_000339955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/955/GCF_000339955.1_ASM33995v1/ na na na haploid bacteria 1953403 1953403 36.500000 0 113 113 NCBI RefSeq GCF_000339955.1-RS_2026_03_28 2026-03-28 1912 1815 35 23228887 GCF_000339975.1 PRJNA224116 SAMN02428933 AHSM00000000.1 na 857124 1309 Streptococcus mutans N66 strain=N66 na latest Contig Major Full 2013-02-11 ASM33997v1 Cornell University GCA_000339975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/975/GCF_000339975.1_ASM33997v1/ na na na haploid bacteria 2006044 2006044 37.000000 0 113 113 NCBI RefSeq GCF_000339975.1-RS_2026_03_28 2026-03-28 2007 1905 35 23228887 GCF_000339995.1 PRJNA224116 SAMN02429078 AHSO00000000.1 na 857122 1309 Streptococcus mutans W6 strain=W6 na latest Contig Major Full 2013-02-11 ASM33999v1 Cornell University GCA_000339995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/339/995/GCF_000339995.1_ASM33999v1/ na na na haploid bacteria 1991361 1991361 36.500000 0 114 114 NCBI RefSeq GCF_000339995.1-RS_2026_03_21 2026-03-21 1981 1887 35 23228887 GCF_000340015.1 PRJNA224116 SAMN02429030 AHSP00000000.1 na 857121 1309 Streptococcus mutans SF1 strain=SF1 na latest Contig Major Full 2013-02-11 ASM34001v1 Cornell University GCA_000340015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/015/GCF_000340015.1_ASM34001v1/ na na na haploid bacteria 2081419 2081419 37.000000 0 185 185 NCBI RefSeq GCF_000340015.1-RS_2026_03_21 2026-03-21 2087 1957 35 23228887 GCF_000340035.1 PRJNA224116 SAMN02429067 AHSS00000000.1 na 857118 1309 Streptococcus mutans ST1 strain=ST1 na latest Contig Major Full 2013-02-11 ASM34003v1 Cornell University GCA_000340035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/035/GCF_000340035.1_ASM34003v1/ na na na haploid bacteria 1980457 1980457 36.500000 0 131 131 NCBI RefSeq GCF_000340035.1-RS_2026_03_21 2026-03-21 1975 1854 35 23228887 GCF_000340055.1 PRJNA224116 SAMN02428976 AHST00000000.1 na 857117 1309 Streptococcus mutans ST6 strain=ST6 na latest Contig Major Full 2013-02-11 ASM34005v1 Cornell University GCA_000340055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/055/GCF_000340055.1_ASM34005v1/ na na na haploid bacteria 1925853 1925853 37.000000 0 121 121 NCBI RefSeq GCF_000340055.1-RS_2026_03_28 2026-03-28 1930 1806 35 23228887 GCF_000340075.1 PRJNA224116 SAMN02429023 AHSW00000000.1 na 857114 1309 Streptococcus mutans NLML1 strain=NLML1 na latest Contig Major Full 2013-02-11 ASM34007v1 Cornell University GCA_000340075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/075/GCF_000340075.1_ASM34007v1/ na na na haploid bacteria 2036028 2036028 36.500000 0 139 139 NCBI RefSeq GCF_000340075.1-RS_2026_03_28 2026-03-28 1969 1860 36 23228887 GCF_000340095.1 PRJNA224116 SAMN02429024 AHSX00000000.1 na 857154 1309 Streptococcus mutans 1ID3 strain=1ID3 na latest Contig Major Full 2013-02-11 ASM34009v1 Cornell University GCA_000340095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/095/GCF_000340095.1_ASM34009v1/ na na na haploid bacteria 1872370 1872370 37.000000 0 90 90 NCBI RefSeq GCF_000340095.1-RS_2026_03_21 2026-03-21 1848 1737 37 23228887 GCF_000340115.1 PRJNA224116 SAMN02428979 AHTA00000000.1 na 857111 1309 Streptococcus mutans 66-2A strain=66-2A na latest Contig Major Full 2013-02-11 ASM34011v1 Cornell University GCA_000340115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/115/GCF_000340115.1_ASM34011v1/ na na na haploid bacteria 1953006 1953006 37.000000 0 113 113 NCBI RefSeq GCF_000340115.1-RS_2026_03_21 2026-03-21 1908 1809 36 23228887 GCF_000340135.1 PRJNA224116 SAMN02428980 AHTC00000000.1 na 857109 1309 Streptococcus mutans SM4 strain=SM4 na latest Contig Major Full 2013-02-11 ASM34013v1 Cornell University GCA_000340135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/135/GCF_000340135.1_ASM34013v1/ na na na haploid bacteria 1977578 1977578 37.000000 0 152 152 NCBI RefSeq GCF_000340135.1-RS_2026_03_21 2026-03-21 1967 1851 35 23228887 GCF_000340155.1 PRJNA224116 SAMN02428934 AHTE00000000.1 na 857107 1309 Streptococcus mutans 24 strain=24 na latest Contig Major Full 2013-02-11 ASM34015v1 Cornell University GCA_000340155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/155/GCF_000340155.1_ASM34015v1/ na na na haploid bacteria 2013675 2013675 36.500000 0 119 119 NCBI RefSeq GCF_000340155.1-RS_2026_03_28 2026-03-28 1999 1886 35 23228887 GCF_000340175.1 PRJNA224116 SAMN02428989 AGWE00000000.1 na 857106 1309 Streptococcus mutans U2B strain=U2B na latest Contig Major Full 2013-02-11 ASM34017v1 Cornell University GCA_000340175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/175/GCF_000340175.1_ASM34017v1/ na na na haploid bacteria 1960144 1960144 37.000000 0 103 103 NCBI RefSeq GCF_000340175.1-RS_2026_03_28 2026-03-28 1957 1849 35 23228887 GCF_000340215.1 PRJNA245146 SAMN02744058 AIHZ00000000.1 reference genome 383855 1873960 Pseudocercospora fijiensis CIRAD86 strain=CIRAD86 na latest Scaffold Major Full 2013-02-26 Mycfi2 DOE Joint Genome Institute GCA_000340215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/215/GCF_000340215.1_Mycfi2/ na na na haploid fungi 74141167 73730520 45.000000 0 56 778 DOE Joint Genome Institute Annotation submitted by DOE Joint Genome Institute 2020-02-05 13125 13059 48 23236275 GCF_000340235.1 PRJNA224116 SAMN02471328 AOGM00000000.1 na 1227814 562 Escherichia coli O08 strain=O08 na latest Contig Major Full 2013-02-12 O8 UNICAMP GCA_000340235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/235/GCF_000340235.1_O8/ na na na haploid bacteria 5084721 5084721 50.500000 0 160 160 NCBI RefSeq GCF_000340235.1-RS_2025_05_22 2025-05-22 5028 4721 78 23516222 GCF_000340255.1 PRJNA224116 SAMN02471327 AOGN00000000.1 na 1227813 562 Escherichia coli S17 strain=S17 na latest Contig Major Full 2013-02-12 S17 UNICAMP GCA_000340255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/255/GCF_000340255.1_S17/ na na na haploid bacteria 4591470 4591470 51.000000 0 187 187 NCBI RefSeq GCF_000340255.1-RS_2025_03_20 2025-03-20 4554 4249 69 23516222 GCF_000340275.1 PRJNA224116 SAMN02471326 AOGL00000000.1 na 1196033 562 Escherichia coli SEPT362 strain=SEPT362 na latest Contig Major Full 2013-02-12 SEPT362 UNICAMP GCA_000340275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/275/GCF_000340275.1_SEPT362/ na na na haploid bacteria 5279952 5279952 50.500000 0 173 173 NCBI RefSeq GCF_000340275.1-RS_2025_05_22 2025-05-22 5275 4930 74 23516222 GCF_000340295.1 PRJNA224116 SAMN02470985 ANIP00000000.1 na 1230477 1423 Bacillus subtilis S1-4 strain=S1-4 na latest Contig Major Full 2012-12-31 ASM34029v1 Sichuan University GCA_000340295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/295/GCF_000340295.1_ASM34029v1/ na na na haploid bacteria 4454050 4454050 43.000000 1 104 104 NCBI RefSeq GCF_000340295.1-RS_2025_06_28 2025-06-28 4932 4564 118 24072866 GCF_000340315.1 PRJNA224116 SAMN02604152 na na 1028566 2285 Sulfolobus acidocaldarius N8 strain=N8 na latest Complete Genome Major Full 2013-02-08 ASM34031v1 University of Cincinnati GCA_000340315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/315/GCF_000340315.1_ASM34031v1/ na na na haploid archaea 2176362 2176362 36.500000 1 1 1 NCBI RefSeq GCF_000340315.1-RS_2026_03_31 2026-03-31 2322 2245 51 22418622 GCF_000340335.1 PRJNA224116 SAMN02471210 AOCF00000000.1 na 1054862 42235 Streptomyces bottropensis ATCC 25435 strain=ATCC 25435 na latest Scaffold Major Full 2013-03-01 ASM34033v2 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences GCA_000340335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/335/GCF_000340335.1_ASM34033v2/ na assembly from type material na haploid bacteria 8914727 8913629 71.000000 0 43 109 NCBI RefSeq GCF_000340335.1-RS_2026_05_16 2026-05-16 7912 7556 78 23516178 GCF_000340375.1 PRJNA224116 SAMN02596729 AGEJ00000000.1 reference genome 999415 31973 Eggerthia catenaformis OT 569 = DSM 20559 strain=OT 569 na latest Scaffold Major Full 2013-02-19 Lact_cate_OT_569_V1 Broad Institute GCA_000340375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/375/GCF_000340375.1_Lact_cate_OT_569_V1/ na assembly from type material na haploid bacteria 1945158 1935589 33.000000 0 8 36 NCBI RefSeq GCF_000340375.1-RS_2026_04_21 2026-04-21 1963 1860 74 na GCF_000340415.1 PRJNA224116 SAMN01939083 ANMG00000000.1 na 1238180 36819 Amycolatopsis azurea DSM 43854 strain=DSM 43854 na latest Contig Major Full 2013-02-12 Amycolatopsis azurea IMTECH GCA_000340415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/415/GCF_000340415.1_Amycolatopsis_azurea/ na assembly from type material na haploid bacteria 9223451 9223451 69.000000 0 154 154 NCBI RefSeq GCF_000340415.1-RS_2026_04_29 2026-04-29 8680 8513 63 na GCF_000340435.2 PRJNA224116 SAMN01918491 na reference genome 1202450 29311 Mycobacterium haemophilum DSM 44634 strain=ATCC 29548 na latest Complete Genome Major Full 2015-10-30 ASM34043v3 Albert Einstein College of Medicine GCA_000340435.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/435/GCF_000340435.2_ASM34043v3/ na assembly from type material na haploid bacteria 4235765 4235765 64.000000 1 1 1 NCBI RefSeq GCF_000340435.2-RS_2026_03_03 2026-03-03 4060 3741 51 na GCF_000340455.2 PRJNA224116 SAMN01112698 AODX00000000.1 na 1081887 562 Escherichia coli 09BKT078844 strain=09BKT078844 na latest Scaffold Minor Full 2013-02-19 ASM34045v2 Institute for Genome Sciences GCA_000340455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/455/GCF_000340455.2_ASM34045v2/ na na na haploid bacteria 5326340 5326280 50.500000 0 616 622 NCBI RefSeq GCF_000340455.2-RS_2025_06_17 2025-06-17 5658 5140 72 na GCF_000340475.1 PRJNA224116 SAMN02470215 AOCX00000000.1 reference genome 1238184 746691 Oceanobacillus kimchii X50 strain=X50 na latest Chromosome Major Full 2013-02-22 ASM34047v1 Kyung Hee University GCA_000340475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/475/GCF_000340475.1_ASM34047v1/ na assembly from type material na haploid bacteria 3830781 3822411 35.000000 1 1 20 NCBI RefSeq GCF_000340475.1-RS_2026_03_31 2026-03-31 3841 3739 64 na GCF_000340515.1 PRJNA224116 SAMN02471832 AOBT00000000.1 na 1198538 34 Myxococcus xanthus DZF1 strain=DZF1 na latest Contig Major Full 2013-02-13 Myxococcus xanthus DZF1 University of Iowa GCA_000340515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/515/GCF_000340515.1_Myxococcus_xanthus_DZF1/ na na na haploid bacteria 9280603 9280603 69.000000 0 75 75 NCBI RefSeq GCF_000340515.1-RS_2025_08_07 2025-08-07 7596 7429 68 23788552 GCF_000340565.2 PRJNA224116 SAMN01915661 na na 313624 70799 Nodularia spumigena CCY9414 strain=CCY9414 na latest Chromosome Major Full 2014-04-03 ASM34056v3 University of Freiburg GCA_000340565.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/565/GCF_000340565.2_ASM34056v3/ na na na haploid bacteria 5462271 5457771 41.000000 1 1 76 NCBI RefSeq GCF_000340565.2-RS_2026_03_31 2026-03-31 4841 4591 64 23555932 GCF_000340605.1 PRJNA224116 SAMN02596722 AGDW00000000.1 na 999431 158 Treponema denticola H1-T strain=H1-T na latest Chromosome Major Full 2013-02-24 Trep_dent_H1-T_V1 Broad Institute GCA_000340605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/605/GCF_000340605.1_Trep_dent_H1-T_V1/ na na na haploid bacteria 2929700 2920599 38.000000 1 1 26 NCBI RefSeq GCF_000340605.1-RS_2025_07_04 2025-07-04 2752 2656 53 na GCF_000340625.1 PRJNA224116 SAMN02471297 AOSO00000000.1 na 1247714 1247714 Microbacterium sp. UCD-TDU strain=UCD-TDU na latest Scaffold Major Full 2013-02-15 Microbacterium sp. UCD-TDU UC Davis GCA_000340625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/625/GCF_000340625.1_Microbacterium_sp._UCD-TDU/ na na na haploid bacteria 3746321 3745877 68.500000 0 8 15 NCBI RefSeq GCF_000340625.1-RS_2024_07_31 2024-07-31 3722 3641 57 23516225 GCF_000340645.1 PRJNA224116 SAMN02596721 AGDV00000000.1 na 999432 158 Treponema denticola H-22 strain=H-22 na latest Chromosome Major Full 2013-02-24 Trep_dent_H-22_V1 Broad Institute GCA_000340645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/645/GCF_000340645.1_Trep_dent_H-22_V1/ na na na haploid bacteria 2757856 2747786 38.000000 1 1 21 NCBI RefSeq GCF_000340645.1-RS_2025_07_04 2025-07-04 2574 2480 53 na GCF_000340685.1 PRJNA224116 SAMN02596720 AGDU00000000.1 na 999430 158 Treponema denticola ATCC 35404 strain=ATCC 35404 na latest Chromosome Major Full 2013-02-24 Trep_dent_ATCC_35404_V1 Broad Institute GCA_000340685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/685/GCF_000340685.1_Trep_dent_ATCC_35404_V1/ na na na haploid bacteria 2771508 2754203 38.000000 1 1 33 NCBI RefSeq GCF_000340685.1-RS_2025_07_04 2025-07-04 2566 2437 54 na GCF_000340705.1 PRJNA224116 SAMN02596724 AGDY00000000.1 na 999434 158 Treponema denticola OTK strain=OTK na latest Chromosome Major Full 2013-02-24 Trep_dent_OTK_V1 Broad Institute GCA_000340705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/705/GCF_000340705.1_Trep_dent_OTK_V1/ na na na haploid bacteria 2857526 2850287 37.500000 1 1 11 NCBI RefSeq GCF_000340705.1-RS_2025_07_04 2025-07-04 2706 2610 53 na GCF_000340725.1 PRJNA224116 SAMN02596716 AGDQ00000000.1 na 999426 158 Treponema denticola AL-2 strain=AL-2 na latest Chromosome Major Full 2013-02-24 Trep_dent_AL-2_V1 Broad Institute GCA_000340725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/725/GCF_000340725.1_Trep_dent_AL-2_V1/ na na na haploid bacteria 2843090 2832949 38.000000 1 1 18 NCBI RefSeq GCF_000340725.1-RS_2025_07_04 2025-07-04 2677 2584 53 na GCF_000340745.1 PRJNA224116 SAMN02596727 AGEB00000000.1 na 999440 158 Treponema denticola US-Trep strain=US-Trep na latest Scaffold Major Full 2013-02-19 Trep_dent_US-Trep_V1 Broad Institute GCA_000340745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/745/GCF_000340745.1_Trep_dent_US-Trep_V1/ na na na haploid bacteria 2765731 2754526 38.000000 0 2 22 NCBI RefSeq GCF_000340745.1-RS_2025_07_04 2025-07-04 2595 2502 53 na GCF_000340785.1 PRJNA224116 SAMN02603388 na na 1148 1148 Synechocystis sp. PCC 6803 strain=PCC 6803 na latest Complete Genome Major Full 2013-02-19 ASM34078v1 Institute of Biology 3, Faculty of Biology, Albert-Ludwigs-University Freiburg GCA_000340785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/785/GCF_000340785.1_ASM34078v1/ na na na haploid bacteria 3949306 3949306 47.500000 8 8 8 NCBI RefSeq GCF_000340785.1-RS_2024_08_13 2024-08-13 3745 3627 51 23069868 GCF_000340795.1 PRJNA224116 SAMN02641643 na reference genome 1208919 994692 Candidatus Kinetoplastidibacterium desouzai TCC079E strain=TCC079E na latest Complete Genome Major Full 2013-02-19 ASM34079v1 VCU GCA_000340795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/795/GCF_000340795.1_ASM34079v1/ na na na haploid bacteria 833125 833125 30.000000 1 1 1 NCBI RefSeq GCF_000340795.1-RS_2026_05_18 2026-05-18 797 742 55 23345457 GCF_000340825.1 PRJNA224116 SAMN02641642 na reference genome 1208918 33056 Candidatus Kinetoplastidibacterium crithidiae TCC036E strain=TCC036E na latest Complete Genome Major Full 2013-02-19 ASM34082v1 VCU GCA_000340825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/825/GCF_000340825.1_ASM34082v1/ na na na haploid bacteria 821930 821930 31.000000 1 1 1 NCBI RefSeq GCF_000340825.1-RS_2026_05_18 2026-05-18 790 733 56 23345457 GCF_000340865.1 PRJNA224116 SAMN02641644 na reference genome 1208920 994696 Candidatus Kinetoplastidibacterium stringomonadis TCC290E strain=TCC290E na latest Complete Genome Major Full 2013-02-19 ASM34086v1 VCU GCA_000340865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/865/GCF_000340865.1_ASM34086v1/ na na na haploid bacteria 810172 810172 31.000000 1 1 1 NCBI RefSeq GCF_000340865.1-RS_2026_05_18 2026-05-18 762 703 55 23345457 GCF_000340885.1 PRJNA224116 SAMN02603265 na reference genome 931276 36745 Clostridium saccharoperbutylacetonicum N1-4(HMT) strain=N1-4(HMT) na latest Complete Genome Major Full 2013-02-19 ASM34088v1 Georg-August-University Goettingen GCA_000340885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/885/GCF_000340885.1_ASM34088v1/ na assembly from type material na haploid bacteria 6666445 6666445 29.500000 2 2 2 NCBI RefSeq GCF_000340885.1-RS_2026_04_14 2026-04-14 6003 5830 109 25323722 GCF_000340905.1 PRJNA224116 SAMN02641645 na reference genome 1208921 994695 Candidatus Kinetoplastidibacterium galati TCC219 strain=TCC219 na latest Complete Genome Major Full 2013-02-19 ASM34090v1 VCU GCA_000340905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/905/GCF_000340905.1_ASM34090v1/ na na na haploid bacteria 822140 822140 32.500000 1 1 1 NCBI RefSeq GCF_000340905.1-RS_2026_05_18 2026-05-18 788 723 55 23345457 GCF_000340925.1 PRJNA224116 SAMN02641646 na na 1208922 233181 Candidatus Kinetoplastidibacterium blastocrithidiae TCC012E strain=TCC012E na latest Complete Genome Major Full 2013-02-19 ASM34092v1 VCU GCA_000340925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/925/GCF_000340925.1_ASM34092v1/ na na na haploid bacteria 820029 820029 32.500000 1 1 1 NCBI RefSeq GCF_000340925.1-RS_2026_05_18 2026-05-18 793 737 55 23345457 GCF_000340965.1 PRJNA224116 SAMN02472160 ANAY00000000.1 reference genome 1246445 141693 Nocardiopsis kunsanensis DSM 44524 strain=DSM 44524 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000340965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/965/GCF_000340965.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 5312089 5312089 69.500000 0 97 97 NCBI RefSeq GCF_000340965.1-RS_2025_11_20 2025-11-20 4690 4537 66 23626695 GCF_000340985.1 PRJNA224116 SAMN02472148 ANAZ00000000.1 reference genome 1246448 239974 Nocardiopsis valliformis DSM 45023 strain=DSM 45023 na latest Contig Major Full 2013-02-19 genetic mechanisms of environmental adaptability Yunnan Institute of Microbiology, Yunnan University GCA_000340985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/340/985/GCF_000340985.1_genetic_mechanisms_of_environmental_adaptability/ na assembly from type material na haploid bacteria 7145336 7145336 69.500000 0 88 88 NCBI RefSeq GCF_000340985.1-RS_2025_11_21 2025-11-21 6312 6166 62 23626695 GCF_000341005.1 PRJNA224116 SAMN02472156 ANBD00000000.1 reference genome 1246461 225762 Nocardiopsis alkaliphila YIM 80379 strain=YIM 80379 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/005/GCF_000341005.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 5209552 5209552 67.500000 0 213 213 NCBI RefSeq GCF_000341005.1-RS_2025_11_21 2025-11-21 4759 4550 62 23626695 GCF_000341025.1 PRJNA224116 SAMN02472151 ANBF00000000.1 reference genome 1246485 245836 Nocardiopsis salina YIM 90010 strain=YIM 90010 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/025/GCF_000341025.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 5808301 5808301 70.500000 0 272 272 NCBI RefSeq GCF_000341025.1-RS_2025_11_20 2025-11-20 5348 4976 70 23626695 GCF_000341045.1 PRJNA224116 SAMN02470060 ANSK00000000.1 na 1268285 984307 Paraburkholderia kururiensis M130 strain=M130 na latest Contig Major Full 2013-02-19 120831 BK International Centre for Genetic Engineering and Biotechnology GCA_000341045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/045/GCF_000341045.1_120831_BK/ na na na haploid bacteria 7128857 7128857 65.000000 0 9 9 NCBI RefSeq GCF_000341045.1-RS_2026_03_30 2026-03-30 6354 6159 69 23558537 GCF_000341065.1 PRJNA224116 SAMN02472154 ANAX00000000.1 reference genome 1246444 124252 Nocardiopsis halotolerans DSM 44410 strain=DSM 44410 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/065/GCF_000341065.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6263929 6263929 71.500000 0 424 424 NCBI RefSeq GCF_000341065.1-RS_2025_11_20 2025-11-20 5698 5288 63 23626695 GCF_000341085.1 PRJNA224116 SAMN02472158 ANBA00000000.1 reference genome 1237500 239984 Nocardiopsis ganjiahuensis DSM 45031 strain=DSM 45031 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/085/GCF_000341085.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 7352287 7352287 71.000000 0 54 54 NCBI RefSeq GCF_000341085.1-RS_2025_11_21 2025-11-21 6511 6384 64 23626695 GCF_000341105.1 PRJNA224116 SAMN02472155 ANBB00000000.1 reference genome 570268 1246458 Nocardiopsis potens DSM 45234 strain=DSM 45234 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/105/GCF_000341105.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6909969 6909969 75.000000 0 133 133 NCBI RefSeq GCF_000341105.1-RS_2025_11_20 2025-11-20 5973 5848 69 23626695 GCF_000341125.1 PRJNA224116 SAMN02472149 ANBC00000000.1 reference genome 1246460 53441 Nocardiopsis lucentensis DSM 44048 strain=DSM 44048 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/125/GCF_000341125.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6325274 6325274 71.000000 0 968 968 NCBI RefSeq GCF_000341125.1-RS_2025_11_21 2025-11-21 6290 5734 67 23626695 GCF_000341145.1 PRJNA224116 SAMN02472150 ANBE00000000.1 reference genome 1246474 124285 Nocardiopsis xinjiangensis YIM 90004 strain=YIM 90004 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/145/GCF_000341145.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 5330432 5330432 69.500000 0 90 90 NCBI RefSeq GCF_000341145.1-RS_2025_11_21 2025-11-21 4722 4520 62 23626695 GCF_000341165.1 PRJNA224116 SAMN02472152 ANBG00000000.1 na 1235441 280236 Nocardiopsis gilva YIM 90087 strain=YIM 90087 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/165/GCF_000341165.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6041741 6041741 69.500000 0 481 481 NCBI RefSeq GCF_000341165.1-RS_2025_12_03 2025-12-03 5715 5343 59 23626695 GCF_000341185.1 PRJNA224116 SAMN02472161 ANBH00000000.1 reference genome 1246475 280239 Nocardiopsis chromatogenes YIM 90109 strain=YIM 90109 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/185/GCF_000341185.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6908750 6908750 74.000000 0 415 415 NCBI RefSeq GCF_000341185.1-RS_2025_11_20 2025-11-20 6225 5924 59 23626695 GCF_000341205.1 PRJNA224116 SAMN02472159 ANAS00000000.1 reference genome 1236902 280240 Nocardiopsis baichengensis YIM 90130 strain=YIM 90130 na latest Contig Major Full 2013-02-19 v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/205/GCF_000341205.1_v1.06/ na assembly from type material na haploid bacteria 6404110 6404110 73.500000 0 71 71 NCBI RefSeq GCF_000341205.1-RS_2025_11_21 2025-11-21 5625 5506 65 23626695 GCF_000341225.1 PRJNA224116 SAMN02472146 ANAC00000000.1 na 1245473 53437 Nocardiopsis alba DSM 43377 strain=DSM 43377 na latest Contig Major Full 2013-02-19 SOAPdenovo1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/225/GCF_000341225.1_SOAPdenovo1.06/ na assembly from type material na haploid bacteria 5820411 5820411 70.000000 0 55 55 NCBI RefSeq GCF_000341225.1-RS_2025_12_05 2025-12-05 5178 5073 65 23626695 GCF_000341245.1 PRJNA224116 SAMN02472157 ANAD00000000.1 reference genome 1245472 141692 Nocardiopsis halophila DSM 44494 strain=DSM 44494 na latest Contig Major Full 2013-02-19 SOAPdenovo v1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/245/GCF_000341245.1_SOAPdenovo_v1.06/ na assembly from type material na haploid bacteria 6320069 6320069 73.500000 0 300 300 NCBI RefSeq GCF_000341245.1-RS_2025_11_20 2025-11-20 5730 5449 60 23626695 GCF_000341265.1 PRJNA224116 SAMN02472147 ANAE00000000.1 reference genome 1245475 2015 Nocardiopsis prasina DSM 43845 strain=DSM 43845 na latest Contig Major Full 2013-02-19 SOAPdenovo 1.06 Yunnan Institute of Microbiology, Yunnan University GCA_000341265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/265/GCF_000341265.1_SOAPdenovo_1.06/ na assembly from type material na haploid bacteria 5998803 5998803 71.000000 0 240 240 NCBI RefSeq GCF_000341265.1-RS_2025_11_20 2025-11-20 5414 5196 60 23626695 GCF_000341345.1 PRJNA224116 SAMN02603027 na reference genome 1121362 225326 Corynebacterium halotolerans YIM 70093 = DSM 44683 strain=YIM 70093 = DSM 44683 na latest Complete Genome Major Full 2013-02-20 ASM34134v1 Bielefeld University GCA_000341345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/345/GCF_000341345.1_ASM34134v1/ na assembly from type material na haploid bacteria 3222008 3222008 68.500000 2 2 2 NCBI RefSeq GCF_000341345.1-RS_2026_04_23 2026-04-23 2973 2875 67 23408721 GCF_000341355.1 PRJNA224116 SAMN02604270 na reference genome 1094489 388640 Bartonella australis AUST/NH1 strain=AUST/NH1 na latest Complete Genome Major Full 2013-02-20 ASM34135v1 Uppsala University GCA_000341355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/355/GCF_000341355.1_ASM34135v1/ na assembly from type material na haploid bacteria 1596490 1596490 42.000000 1 1 1 NCBI RefSeq GCF_000341355.1-RS_2026_03_30 2026-03-30 1382 1303 52 23555299 GCF_000341385.1 PRJNA224116 SAMN02604271 na na 1094497 33047 Bartonella vinsonii subsp. berkhoffii str. Winnie strain=Winnie na latest Complete Genome Major Full 2013-02-20 ASM34138v1 Uppsala University GCA_000341385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/385/GCF_000341385.1_ASM34138v1/ na na na haploid bacteria 1802699 1802699 39.000000 1 1 1 NCBI RefSeq GCF_000341385.1-RS_2026_03_31 2026-03-31 1628 1478 52 23555299 GCF_000341395.1 PRJNA224116 SAMN02602964 na reference genome 1167006 65555 Desulfocapsa sulfexigens DSM 10523 strain=DSM 10523 na latest Complete Genome Major Full 2013-02-20 ASM34139v1 Aarhus University, Aarhus, Denmark GCA_000341395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/395/GCF_000341395.1_ASM34139v1/ na assembly from type material na haploid bacteria 4023512 4023512 45.500000 2 2 2 NCBI RefSeq GCF_000341395.1-RS_2025_12_10 2025-12-10 3612 3527 59 na GCF_000341425.1 PRJNA224116 SAMN01832085 na na 1267753 28901 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 strain=CFSAN001992 na latest Complete Genome Major Full 2013-02-20 ASM34142v1 FDA GCA_000341425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/425/GCF_000341425.1_ASM34142v1/ na na na haploid bacteria 4675267 4675267 52.000000 3 3 3 NCBI RefSeq GCF_000341425.1-RS_2025_04_07 2025-04-07 4591 4266 120 23516208 GCF_000341445.1 PRJNA224116 SAMN02469807 AMPD00000000.1 na 1231058 50719 Vibrio diabolicus E0666 strain=E0666 na latest Contig Major Full 2013-02-20 VibrioE0666 Department of Laboratory Medicine, General Hospital of Jinan Military Region of PLA GCA_000341445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/445/GCF_000341445.1_VibrioE0666/ na na na haploid bacteria 5048917 5048917 45.000000 0 129 129 NCBI RefSeq GCF_000341445.1-RS_2025_12_21 2025-12-21 4634 4448 101 23990586 GCF_000341465.2 PRJNA224116 SAMN02951876 na na 1266729 35814 Bordetella holmesii F627 strain=F627 na latest Complete Genome Major Full 2016-02-25 ASM34146v2 CDC GCA_000341465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/465/GCF_000341465.2_ASM34146v2/ na na na haploid bacteria 3701221 3701221 62.500000 1 1 1 NCBI RefSeq GCF_000341465.2-RS_2026_04_02 2026-04-02 3590 3244 72 23516195 GCF_000341485.2 PRJNA224116 SAMN02951877 na na 1281885 35814 Bordetella holmesii H558 strain=H558 na latest Complete Genome Major Full 2016-02-08 ASM34148v2 CDC GCA_000341485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/485/GCF_000341485.2_ASM34148v2/ na na na haploid bacteria 3696428 3696428 62.500000 1 1 1 NCBI RefSeq GCF_000341485.2-RS_2026_04_04 2026-04-04 3585 3235 69 23516195 GCF_000341505.1 PRJNA224116 SAMD00041800 BANW00000000.1 na 667121 636 Edwardsiella tarda ATCC 15947 = NBRC 105688 strain=NBRC 105688 na latest Contig Major Full 2013-02-14 ASM34150v1 National Institute of Technology and Evaluation GCA_000341505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/505/GCF_000341505.1_ASM34150v1/ na assembly from type material na haploid bacteria 3610384 3610384 57.500000 0 34 34 NCBI RefSeq GCF_000341505.1-RS_2025_08_09 2025-08-09 3339 3213 76 na GCF_000341525.1 PRJNA224116 SAMEA2272146 CANO00000000.1 na 1194208 313439 Streptococcus massiliensis 4401825 strain=4401825 na latest Contig Major Full 2013-02-15 ASM34152v1 ebi GCA_000341525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/525/GCF_000341525.1_ASM34152v1/ na assembly from type material na haploid bacteria 1836889 1836889 41.500000 0 105 105 NCBI RefSeq GCF_000341525.1-RS_2025_12_02 2025-12-02 1894 1786 48 na GCF_000341545.2 PRJNA224116 SAMEA2272521 CAQJ00000000.1 reference genome 1266370 35801 Nitrospina gracilis 3/211 strain=3/211 na latest Scaffold Major Full 2013-08-14 ASM34154v2 Univie GCA_000341545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/545/GCF_000341545.2_ASM34154v2/ na assembly from type material na haploid bacteria 3077713 3067213 56.000000 0 4 109 NCBI RefSeq GCF_000341545.2-RS_2025_08_25 2025-08-25 3009 2898 51 23439773 GCF_000341565.1 PRJNA224116 SAMEA2272507 CAQZ00000000.1 na 1286151 287 Pseudomonas aeruginosa 18A strain=18A na latest Contig Major Full 2013-02-15 ASM34156v1 UNSW GCA_000341565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/565/GCF_000341565.1_ASM34156v1/ na na na haploid bacteria 6093587 6093587 66.500000 0 179 179 NCBI RefSeq GCF_000341565.1-RS_2025_03_18 2025-03-18 5820 5584 79 na GCF_000341615.1 PRJNA224116 SAMN02471580 AOBS00000000.1 na 1212548 316 Stutzerimonas stutzeri NF13 strain=NF13 na latest Contig Major Full 2013-02-21 PstNF13_1.0 University of Balearic Islands GCA_000341615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/615/GCF_000341615.1_PstNF13_1.0/ na na na haploid bacteria 4674667 4674667 63.000000 0 82 82 NCBI RefSeq GCF_000341615.1-RS_2025_05_21 2025-05-21 4415 4276 61 23516224 GCF_000341635.1 PRJNA224116 SAMN02393733 AOGP00000000.1 na 1261125 75985 Mannheimia haemolytica serotype 6 str. H23 strain=H23 na latest Contig Major Full 2013-02-22 MH23v1 Agriculture and Agri-Food Canada GCA_000341635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/635/GCF_000341635.1_MH23v1/ na na na haploid bacteria 2661878 2661878 41.000000 0 68 68 NCBI RefSeq GCF_000341635.1-RS_2025_08_07 2025-08-07 2717 2543 59 23558528 GCF_000341655.1 PRJNA224116 SAMN02603239 na na 1193807 61435 Dehalococcoides mccartyi DCMB5 strain=DCMB5 na latest Complete Genome Major Full 2013-02-22 ASM34165v1 Friedrich-Schiller-University of Jena GCA_000341655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/655/GCF_000341655.1_ASM34165v1/ na na na haploid bacteria 1431902 1431902 47.000000 1 1 1 NCBI RefSeq GCF_000341655.1-RS_2025_01_31 2025-01-31 1518 1461 51 23600617 GCF_000341665.1 PRJNA224116 SAMN02604143 na na 1286404 1428 Bacillus thuringiensis serovar thuringiensis str. IS5056 strain=IS5056 na latest Complete Genome Major Full 2013-02-22 ASM34166v1 University of Bialystok GCA_000341665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/665/GCF_000341665.1_ASM34166v1/ na na na haploid bacteria 6771593 6771593 35.000000 15 15 15 NCBI RefSeq GCF_000341665.1-RS_2026_04_29 2026-04-29 6897 6512 130 23516221 GCF_000341695.1 PRJNA224116 SAMN02603238 na na 1193806 61435 Dehalococcoides mccartyi BTF08 strain=BTF08 na latest Complete Genome Major Full 2013-02-22 ASM34169v1 Friedrich-Schiller-University of Jena GCA_000341695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/695/GCF_000341695.1_ASM34169v1/ na na na haploid bacteria 1452335 1452335 47.500000 1 1 1 NCBI RefSeq GCF_000341695.1-RS_2025_08_17 2025-08-17 1558 1498 53 23600617 GCF_000341715.1 PRJNA224116 SAMN02603746 na na 1236903 2209 Methanosarcina mazei Tuc01 strain=Tuc01 na latest Complete Genome Major Full 2013-02-22 ASM34171v1 Rede Paraense de Genomica e Proteomica GCA_000341715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/715/GCF_000341715.1_ASM34171v1/ na na na haploid archaea 3427949 3427949 42.500000 1 1 1 NCBI RefSeq GCF_000341715.1-RS_2025_12_05 2025-12-05 3199 2979 53 23704185 GCF_000341735.1 PRJNA224116 SAMN02261325 AOTL00000000.1 na 675511 95641 Methylotuvimicrobium buryatense 5G strain=5G na latest Scaffold Major Full 2013-02-22 ASM34173v1 JGI GCA_000341735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/735/GCF_000341735.1_ASM34173v1/ na na na haploid bacteria 5067278 5064878 48.500000 0 2 26 NCBI RefSeq GCF_000341735.1-RS_2026_01_27 2026-01-27 4367 4281 57 23814105 GCF_000341795.1 PRJNA224116 SAMN02469993 AODO00000000.1 na 1278078 300028 Rhodococcus triatomae BKS 15-14 strain=BKS 15-14 na latest Contig Major Full 2013-02-25 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000341795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/795/GCF_000341795.1_Whole_genome_assembly/ na na na haploid bacteria 5824349 5824349 69.000000 0 74 74 NCBI RefSeq GCF_000341795.1-RS_2025_11_24 2025-11-24 5400 5298 61 23538907 GCF_000341815.1 PRJNA224116 SAMN02469985 AODN00000000.1 na 1278077 334542 Rhodococcus qingshengii BKS 20-40 strain=BKS 20-40 na latest Contig Major Full 2013-02-25 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000341815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/815/GCF_000341815.1_Whole_genome_assembly/ na na na haploid bacteria 6601618 6601618 62.500000 0 104 104 NCBI RefSeq GCF_000341815.1-RS_2026_04_02 2026-04-02 6224 6099 58 23538906 GCF_000341855.1 PRJNA224116 SAMN02232031 na na 547144 547144 Hydrogenobaculum sp. HO strain=HO na latest Complete Genome Major Full 2013-02-26 ASM34185v1 DOE Joint Genome Institute GCA_000341855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/855/GCF_000341855.1_ASM34185v1/ na na na haploid bacteria 1552931 1552931 35.000000 1 1 1 NCBI RefSeq GCF_000341855.1-RS_2024_05_12 2024-05-12 1674 1606 54 23435891 GCF_000341875.1 PRJNA224116 SAMEA2272633 na na 1150475 492670 Bacillus velezensis UCMB5036 strain=UCMB5036 na latest Complete Genome Major Full 2013-02-21 ASM34187v1 HGEN GCA_000341875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/875/GCF_000341875.1_ASM34187v1/ na na na haploid bacteria 3910324 3910324 46.500000 1 1 1 NCBI RefSeq GCF_000341875.1-RS_2026_02_11 2026-02-11 3872 3682 122 na GCF_000341895.1 PRJNA224116 SAMEA2272703 na reference genome 1322246 879567 Pseudodesulfovibrio piezophilus C1TLV30 strain=type strain: C1TLV30 na latest Chromosome Major Full 2013-02-19 ASM34189v1 Genoscope CEA GCA_000341895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/895/GCF_000341895.1_ASM34189v1/ na assembly from type material na haploid bacteria 3646098 3644098 50.000000 1 1 2 NCBI RefSeq GCF_000341895.1-RS_2025_12_09 2025-12-09 3341 3248 72 23383081 GCF_000341965.1 PRJNA224116 SAMN02470007 AOEX00000000.1 na 1278076 1830 Rhodococcus ruber BKS 20-38 strain=BKS 20-38 na latest Contig Major Full 2013-02-26 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000341965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/965/GCF_000341965.1_Whole_genome_assembly/ na na na haploid bacteria 6126900 6126900 69.500000 0 108 108 NCBI RefSeq GCF_000341965.1-RS_2025_05_21 2025-05-21 5726 5538 58 23558535 GCF_000341985.1 PRJNA224116 SAMN02469980 AODW00000000.1 na 1278070 470 Acinetobacter baumannii MSP4-16 strain=MSP4-16 na latest Contig Major Full 2013-02-26 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000341985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/985/GCF_000341985.1_Whole_genome_assembly/ na na na haploid bacteria 3944542 3944542 39.000000 0 53 53 NCBI RefSeq GCF_000341985.1-RS_2026_07_01 2026-07-01 3820 3681 74 23558533 GCF_000342005.1 PRJNA224116 SAMN02470008 AOHO00000000.1 reference genome 1284240 208441 Amycolatopsis decaplanina DSM 44594 strain=DSM 44594 na latest Contig Major Full 2013-02-26 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000342005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/005/GCF_000342005.1_Whole_genome_assembly/ na assembly from type material na haploid bacteria 8533276 8533276 68.500000 0 85 85 NCBI RefSeq GCF_000342005.1-RS_2026_03_30 2026-03-30 7903 7744 61 23558534 GCF_000342025.1 PRJNA224116 SAMN02469463 ANPK00000000.1 na 1257079 1428 Bacillus thuringiensis DAR 81934 strain=DAR 81934 na latest Chromosome Major Full 2013-03-01 BTHUDAR81934.1 Black Box Bioinformatics GCA_000342025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/025/GCF_000342025.1_BTHUDAR81934.1/ na na na haploid bacteria 5943799 5759499 35.000000 2 11 83 NCBI RefSeq GCF_000342025.1-RS_2025_05_30 2025-05-30 6009 5486 101 23516227 GCF_000342045.1 PRJNA224116 SAMN02469417 AONQ00000000.1 reference genome 1244869 1244869 Paramagnetospirillum caucaseum strain=SO-1 na latest Contig Major Full 2013-02-26 MagSO-1_1.0 Centre Bioengineering RAS GCA_000342045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/045/GCF_000342045.1_MagSO-1_1.0/ na assembly from type material na haploid bacteria 4870514 4870514 66.000000 0 236 236 NCBI RefSeq GCF_000342045.1-RS_2025_12_09 2025-12-09 4828 4666 53 24723706 GCF_000342065.1 PRJNA224116 SAMN02471174 ANNC00000000.1 na 1222031 470 Acinetobacter baumannii AB1H8 strain=AB1H8 na latest Contig Major Full 2013-02-26 454 The University of Hong Kong GCA_000342065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/065/GCF_000342065.1_454/ na na na haploid bacteria 3993780 3993780 39.000000 0 69 69 NCBI RefSeq GCF_000342065.1-RS_2026_02_01 2026-02-01 3896 3710 82 23723398 GCF_000342085.1 PRJNA224116 SAMN02471180 ANND00000000.1 na 1222033 470 Acinetobacter baumannii AB405E4 strain=AB405E4 na latest Contig Major Full 2013-02-26 454 The University of Hong Kong GCA_000342085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/085/GCF_000342085.1_454/ na na na haploid bacteria 3653486 3653486 39.000000 0 139 139 NCBI RefSeq GCF_000342085.1-RS_2026_02_11 2026-02-11 3656 3334 82 na GCF_000342105.1 PRJNA224116 SAMN02471705 AOFM00000000.1 na 1274524 119858 Bacillus sonorensis L12 strain=L12 na latest Contig Major Full 2013-02-26 Draft Genome Sequence of Bacillus sonorensis L12 University of Copenhagen GCA_000342105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/105/GCF_000342105.1_Draft_Genome_Sequence_of_Bacillus_sonorensis_L12/ na na na haploid bacteria 4647754 4647754 45.000000 0 34 34 NCBI RefSeq GCF_000342105.1-RS_2026_04_03 2026-04-03 4823 4586 89 23538904 GCF_000342125.1 PRJNA224116 SAMN02470112 AORZ00000000.1 na 1223523 35621 Streptomyces mobaraensis NBRC 13819 = DSM 40847 strain=DSM 40847 na latest Contig Major Full 2013-02-27 S.mobaraensisn 1.0 Jiangxi Normal University GCA_000342125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/125/GCF_000342125.1_S.mobaraensisn_1.0/ na assembly from type material na haploid bacteria 7477811 7477811 73.500000 0 266 266 NCBI RefSeq GCF_000342125.1-RS_2026_03_31 2026-03-31 6583 6349 76 23558536 GCF_000342145.1 PRJNA224116 SAMN01911283 AOIH00000000.1 na 1285581 287 Pseudomonas aeruginosa PA21_ST175 strain=PA21_ST175 na latest Contig Major Full 2013-02-27 PA_21_ST175v1 Hospital Universitario 12 de Octubre GCA_000342145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/145/GCF_000342145.1_PA_21_ST175v1/ na na na haploid bacteria 6888495 6888495 66.000000 0 90 90 NCBI RefSeq GCF_000342145.1-RS_2026_04_26 2026-04-26 6559 6394 67 23580706 GCF_000342165.1 PRJNA224116 SAMN02472131 AMRV00000000.1 reference genome 1234595 1234595 Pacificimonas flava strain=JLT2015 na latest Contig Major Full 2013-02-21 Alphaproteobacteria-version1 State Key Laboratory for Marine Environmental Science, Xiamen University, Xiamen, FuJian 361005, P.R. China GCA_000342165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/165/GCF_000342165.1_Alphaproteobacteria-version1/ na assembly from type material na haploid bacteria 3253933 3253933 64.000000 0 38 38 NCBI RefSeq GCF_000342165.1-RS_2026_03_30 2026-03-30 3060 2956 58 23661488 GCF_000342185.1 PRJNA224116 SAMN02471919 ANGD00000000.1 na 1104680 317 Pseudomonas syringae pv. actinidiae ICMP 18744 strain=ICMP 18744 na latest Contig Major Full 2013-02-27 ICMP18744PSA1.0 University of Otago GCA_000342185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/185/GCF_000342185.1_ICMP18744PSA1.0/ na na na haploid bacteria 6235607 6235607 58.500000 0 442 442 NCBI RefSeq GCF_000342185.1-RS_2026_03_21 2026-03-21 5795 5369 66 na GCF_000342205.1 PRJNA224116 SAMN02470620 AORJ00000000.1 na 1263833 615 Serratia marcescens VGH107 strain=VGH107 na latest Contig Major Full 2013-02-27 SerMar 1.0 Department of Computer Science and Information Engineering, National Chung Cheng University GCA_000342205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/205/GCF_000342205.1_SerMar_1.0/ na na na haploid bacteria 5519124 5519124 59.500000 0 83 83 NCBI RefSeq GCF_000342205.1-RS_2026_04_01 2026-04-01 5355 5170 101 23682149 GCF_000342305.2 PRJNA224116 SAMN02471035 AOCM00000000.1 na 748003 672 Vibrio vulnificus VVyb1(BT3) strain=VVyb1(BT3) na latest Chromosome Minor Full 2013-03-01 vvyb1_bt3.5 Technion - Israel Institute of Technology, Faculty of Biotechnology & Food Engineering, Laboratory of Applied Genomics GCA_000342305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/305/GCF_000342305.2_vvyb1_bt3.5/ na na na haploid bacteria 5745612 5740012 46.500000 3 86 139 NCBI RefSeq GCF_000342305.2-RS_2026_03_29 2026-03-29 5209 4899 85 23599289 GCF_000342325.1 PRJNA224116 SAMN02469850 AOMS00000000.1 na 1288347 546 Citrobacter freundii GTC 09479 strain=GTC 09479 na latest Contig Major Full 2013-02-28 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000342325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/325/GCF_000342325.1_Whole_genome_assembly/ na na na haploid bacteria 4899578 4899578 51.500000 0 31 31 NCBI RefSeq GCF_000342325.1-RS_2026_02_06 2026-02-06 4699 4541 96 na GCF_000342345.1 PRJNA224116 SAMN02469981 AOHP00000000.1 na 1284664 36817 Streptomyces gancidicus BKS 13-15 strain=BKS 13-15 na latest Contig Major Full 2013-02-28 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000342345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/345/GCF_000342345.1_Whole_genome_assembly/ na na na haploid bacteria 7300479 7300479 72.500000 0 171 171 NCBI RefSeq GCF_000342345.1-RS_2025_08_31 2025-08-31 6720 6456 74 23599292 GCF_000342365.1 PRJNA224116 SAMN01886736 AOHG00000000.1 na 1218574 173 Leptospira interrogans serovar Pomona str. Fox 32256 strain=Fox 32256 na latest Contig Major Full 2013-02-28 gls454201v02 J. Craig Venter Institute GCA_000342365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/365/GCF_000342365.1_gls454201v02/ na na na haploid bacteria 4583716 4583716 35.000000 0 172 172 NCBI RefSeq GCF_000342365.1-RS_2026_02_06 2026-02-06 3837 3511 44 na GCF_000342445.1 PRJNA224116 SAMN02470529 ANBV00000000.1 na 1005941 1215089 Planococcus halocryophilus Or1 strain=Or1 na latest Contig Major Full 2013-02-28 PlanoHalo1.0 McGill University GCA_000342445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/445/GCF_000342445.1_PlanoHalo1.0/ na assembly from type material na haploid bacteria 3426806 3426806 40.000000 0 34 34 NCBI RefSeq GCF_000342445.1-RS_2026_02_02 2026-02-02 3627 3114 90 23389107 GCF_000342505.1 PRJNA224116 SAMN02469869 ALWR00000000.1 na 1207544 1348 Streptococcus parauberis KRS-02109 strain=KRS-02109 na latest Contig Major Full 2013-03-01 type2 Gyeongsang National University GCA_000342505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/505/GCF_000342505.1_type2/ na na na haploid bacteria 2046538 2046538 35.500000 0 5 5 NCBI RefSeq GCF_000342505.1-RS_2026_04_02 2026-04-02 2065 1970 38 24260382 GCF_000342585.1 PRJNA224116 SAMN02469317 AOGR00000000.1 na 1276649 1747 Cutibacterium acnes FZ1/2/0 strain=FZ1/2/0 na latest Contig Major Full 2013-03-01 PropiAcnFZ1/2/0_1.0 BAYGEN GCA_000342585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/585/GCF_000342585.1_PropiAcnFZ1_2_0_1.0/ na na na haploid bacteria 2477530 2477530 60.000000 0 25 25 NCBI RefSeq GCF_000342585.1-RS_2026_04_27 2026-04-27 2434 2279 58 na GCF_000342645.1 PRJNA224116 SAMN01919808 AOWJ00000000.1 na 1291307 173 Leptospira interrogans serovar Canicola str. P2655 strain=P2655 na latest Contig Major Full 2013-03-01 CA_glsol063 J. Craig Venter Institute GCA_000342645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/645/GCF_000342645.1_CA_glsol063/ na na na haploid bacteria 4606909 4606909 35.000000 0 178 178 NCBI RefSeq GCF_000342645.1-RS_2026_02_15 2026-02-15 3852 3566 42 na GCF_000342665.1 PRJNA224116 SAMN01920633 AOWA00000000.1 na 1291326 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4113 strain=Fiocruz LV4113 na latest Contig Major Full 2013-03-01 CA_glsol095 J. Craig Venter Institute GCA_000342665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/665/GCF_000342665.1_CA_glsol095/ na na na haploid bacteria 4620855 4620855 35.000000 0 133 133 NCBI RefSeq GCF_000342665.1-RS_2026_02_15 2026-02-15 3819 3642 45 na GCF_000342685.1 PRJNA224116 SAMN01920597 AOWO00000000.1 na 1291356 173 Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30 strain=Sri Lanka 30 na latest Contig Major Full 2013-03-01 CA_glsol055 J. Craig Venter Institute GCA_000342685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/685/GCF_000342685.1_CA_glsol055/ na na na haploid bacteria 5032494 5032494 35.000000 0 208 208 NCBI RefSeq GCF_000342685.1-RS_2026_02_09 2026-02-09 4406 4145 42 na GCF_000342705.1 PRJNA224116 SAMN01920632 AOVD00000000.1 na 1291345 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3409 strain=Fiocruz LV3409 na latest Contig Major Full 2013-03-01 CA_glsol153 J. Craig Venter Institute GCA_000342705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/705/GCF_000342705.1_CA_glsol153/ na na na haploid bacteria 4602194 4602194 35.000000 0 140 140 NCBI RefSeq GCF_000342705.1-RS_2026_02_15 2026-02-15 3793 3624 42 na GCF_000342725.1 PRJNA224116 SAMN01919807 AOWK00000000.1 na 1291234 29507 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 3 strain=Vehlefans 3 na latest Contig Major Full 2013-03-01 CA_glsol062 J. Craig Venter Institute GCA_000342725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/725/GCF_000342725.1_CA_glsol062/ na na na haploid bacteria 4400994 4400994 36.000000 0 179 179 NCBI RefSeq GCF_000342725.1-RS_2026_02_15 2026-02-15 3701 3496 44 na GCF_000342765.1 PRJNA224116 SAMN01920622 AOWR00000000.1 na 1291319 173 Leptospira interrogans serovar Copenhageni str. 2007005490 strain=2007005490 na latest Contig Major Full 2013-03-01 CA_glsol043 J. Craig Venter Institute GCA_000342765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/765/GCF_000342765.1_CA_glsol043/ na na na haploid bacteria 4601396 4601396 35.000000 0 148 148 NCBI RefSeq GCF_000342765.1-RS_2026_02_15 2026-02-15 3804 3634 42 na GCF_000342805.1 PRJNA224116 SAMN01919809 AOWI00000000.1 na 1291358 173 Leptospira interrogans serovar Pyrogenes str. Sri Lanka 14 strain=Sri Lanka 14 na latest Contig Major Full 2013-03-01 CA_glsol064 J. Craig Venter Institute GCA_000342805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/805/GCF_000342805.1_CA_glsol064/ na na na haploid bacteria 4830118 4830118 35.000000 0 242 242 NCBI RefSeq GCF_000342805.1-RS_2026_02_06 2026-02-06 4132 3865 44 na GCF_000342825.1 PRJNA224116 SAMN01920570 AOWB00000000.1 na 1291325 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4108 strain=Fiocruz LV4108 na latest Contig Major Full 2013-03-01 CA_glsol094 J. Craig Venter Institute GCA_000342825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/825/GCF_000342825.1_CA_glsol094/ na na na haploid bacteria 4619561 4619561 35.000000 0 127 127 NCBI RefSeq GCF_000342825.1-RS_2026_02_15 2026-02-15 3807 3622 47 na GCF_000342845.1 PRJNA224116 SAMN01919804 AOVX00000000.1 na 1291327 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4118 strain=Fiocruz LV4118 na latest Contig Major Full 2013-03-01 CA_glsol098 J. Craig Venter Institute GCA_000342845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/845/GCF_000342845.1_CA_glsol098/ na na na haploid bacteria 4603270 4603270 35.000000 0 151 151 NCBI RefSeq GCF_000342845.1-RS_2026_02_15 2026-02-15 3821 3640 42 na GCF_000342865.1 PRJNA224116 SAMN01920626 AOWP00000000.1 na 1291355 173 Leptospira interrogans serovar Pyrogenes str. Sri Lanka 39 strain=Sri Lanka 39 na latest Contig Major Full 2013-03-01 CA_glsol054 J. Craig Venter Institute GCA_000342865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/865/GCF_000342865.1_CA_glsol054/ na na na haploid bacteria 4852809 4852809 35.000000 0 215 215 NCBI RefSeq GCF_000342865.1-RS_2026_02_15 2026-02-15 4173 3915 42 na GCF_000342885.1 PRJNA224116 SAMN01919805 AOWM00000000.1 na 1291206 174 Leptospira borgpetersenii serovar Hardjo-bovis str. Lely 607 strain=Lely 607 na latest Contig Major Full 2013-03-01 CA_glsol060 J. Craig Venter Institute GCA_000342885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/885/GCF_000342885.1_CA_glsol060/ na na na haploid bacteria 3774172 3774172 40.500000 0 198 198 NCBI RefSeq GCF_000342885.1-RS_2024_09_03 2024-09-03 3412 2919 45 na GCF_000342905.1 PRJNA224116 SAMN01920595 AOWQ00000000.1 na 1291354 173 Leptospira interrogans serovar Pyrogenes str. Sri Lanka 46 strain=Sri Lanka 46 na latest Contig Major Full 2013-03-01 CA_glsol053 J. Craig Venter Institute GCA_000342905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/905/GCF_000342905.1_CA_glsol053/ na na na haploid bacteria 4809837 4809837 35.000000 0 197 197 NCBI RefSeq GCF_000342905.1-RS_2026_02_15 2026-02-15 4132 3883 42 na GCF_000342945.1 PRJNA224116 SAMN01919801 AOUU00000000.1 na 1291363 173 Leptospira interrogans serovar Manilae str. K56 strain=K56 na latest Contig Major Full 2013-03-01 CA_glsol184 J. Craig Venter Institute GCA_000342945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/945/GCF_000342945.1_CA_glsol184/ na na na haploid bacteria 4669465 4669465 35.000000 0 137 137 NCBI RefSeq GCF_000342945.1-RS_2026_02_15 2026-02-15 3887 3641 46 na GCF_000342965.1 PRJNA224116 SAMN01920630 AOVO00000000.1 na 1291335 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2841 strain=Fiocruz LV2841 na latest Contig Major Full 2013-03-01 CA_glsol128 J. Craig Venter Institute GCA_000342965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/965/GCF_000342965.1_CA_glsol128/ na na na haploid bacteria 4610408 4610408 35.000000 0 148 148 NCBI RefSeq GCF_000342965.1-RS_2026_02_15 2026-02-15 3794 3621 46 na GCF_000342985.1 PRJNA224116 SAMN01920564 AOWW00000000.1 na 1291316 173 Leptospira interrogans serovar Copenhageni str. 2006006982 strain=2006006982 na latest Contig Major Full 2013-03-01 CA_glsol037 J. Craig Venter Institute GCA_000342985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/985/GCF_000342985.1_CA_glsol037/ na na na haploid bacteria 4643597 4643597 35.000000 0 174 174 NCBI RefSeq GCF_000342985.1-RS_2026_02_15 2026-02-15 3831 3620 44 na GCF_000343005.1 PRJNA224116 SAMN01920610 AOWT00000000.1 na 1291317 173 Leptospira interrogans serovar Copenhageni str. 2002000634 strain=2002000634 na latest Contig Major Full 2013-03-01 CA_glsol041 J. Craig Venter Institute GCA_000343005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/005/GCF_000343005.1_CA_glsol041/ na na na haploid bacteria 4615771 4615771 35.000000 0 148 148 NCBI RefSeq GCF_000343005.1-RS_2026_02_15 2026-02-15 3828 3657 46 na GCF_000343025.1 PRJNA224116 SAMN01920608 AOWV00000000.1 na 1291359 173 Leptospira interrogans serovar Pomona str. 2006006962 strain=2006006962 na latest Contig Major Full 2013-03-01 CA_glsol038 J. Craig Venter Institute GCA_000343025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/025/GCF_000343025.1_CA_glsol038/ na na na haploid bacteria 4563168 4563168 35.000000 0 204 204 NCBI RefSeq GCF_000343025.1-RS_2026_02_15 2026-02-15 3854 3524 42 na GCF_000343085.1 PRJNA224116 SAMN01920569 AOWC00000000.1 na 1291324 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV237 strain=Fiocruz LV237 na latest Contig Major Full 2013-03-01 CA_glsol093 J. Craig Venter Institute GCA_000343085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/085/GCF_000343085.1_CA_glsol093/ na na na haploid bacteria 4617811 4617811 35.000000 0 136 136 NCBI RefSeq GCF_000343085.1-RS_2026_02_15 2026-02-15 3819 3640 41 na GCF_000343105.1 PRJNA224116 SAMN01920624 AOWS00000000.1 na 1291318 173 Leptospira interrogans serovar Copenhageni str. 2002009669 strain=2002009669 na latest Contig Major Full 2013-03-01 CA_glsol042 J. Craig Venter Institute GCA_000343105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/105/GCF_000343105.1_CA_glsol042/ na na na haploid bacteria 4572939 4572939 35.000000 0 155 155 NCBI RefSeq GCF_000343105.1-RS_2026_02_15 2026-02-15 3787 3622 42 na GCF_000343125.1 PRJNA224116 SAMN01920130 AOVZ00000000.1 na 1291364 173 Leptospira interrogans str. Fiocruz LV4114 strain=Fiocruz LV4114 na latest Contig Major Full 2013-03-01 CA_glsol096 J. Craig Venter Institute GCA_000343125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/125/GCF_000343125.1_CA_glsol096/ na na na haploid bacteria 4613819 4613819 35.000000 0 141 141 NCBI RefSeq GCF_000343125.1-RS_2026_02_15 2026-02-15 3826 3640 44 na GCF_000343145.1 PRJNA224116 SAMN01919803 AOVY00000000.1 na 1291365 173 Leptospira interrogans str. Fiocruz LV4117 strain=Fiocruz LV4117 na latest Contig Major Full 2013-03-01 CA_glsol097 J. Craig Venter Institute GCA_000343145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/145/GCF_000343145.1_CA_glsol097/ na na na haploid bacteria 4605596 4605596 35.000000 0 130 130 NCBI RefSeq GCF_000343145.1-RS_2026_02_15 2026-02-15 3815 3632 44 na GCF_000343165.1 PRJNA224116 SAMN01920605 AOVR00000000.1 na 1291351 173 Leptospira interrogans serovar Icterohaemorrhagiae str. RGA strain=RGA na latest Contig Major Full 2013-03-01 CA_glsol113 J. Craig Venter Institute GCA_000343165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/165/GCF_000343165.1_CA_glsol113/ na assembly from type material na haploid bacteria 4600016 4600016 35.000000 0 143 143 NCBI RefSeq GCF_000343165.1-RS_2026_02_15 2026-02-15 3791 3594 42 na GCF_000343185.1 PRJNA224116 SAMN01920115 AOVW00000000.1 na 1291328 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4152 strain=Fiocruz LV4152 na latest Contig Major Full 2013-03-01 CA_glsol099 J. Craig Venter Institute GCA_000343185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/185/GCF_000343185.1_CA_glsol099/ na na na haploid bacteria 4671937 4671937 35.000000 0 158 158 NCBI RefSeq GCF_000343185.1-RS_2026_02_15 2026-02-15 3863 3687 46 na GCF_000343205.1 PRJNA224116 SAMN01920565 AOVQ00000000.1 na 1291333 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2807 strain=Fiocruz LV2807 na latest Contig Major Full 2013-03-01 CA_glsol121 J. Craig Venter Institute GCA_000343205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/205/GCF_000343205.1_CA_glsol121/ na na na haploid bacteria 4617269 4617269 35.000000 0 162 162 NCBI RefSeq GCF_000343205.1-RS_2026_02_15 2026-02-15 3811 3629 45 na GCF_000343225.1 PRJNA224116 SAMN01920631 AOVM00000000.1 na 1291337 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4173 strain=Fiocruz LV4173 na latest Contig Major Full 2013-03-01 CA_glsol138 J. Craig Venter Institute GCA_000343225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/225/GCF_000343225.1_CA_glsol138/ na na na haploid bacteria 4611929 4611929 35.000000 0 142 142 NCBI RefSeq GCF_000343225.1-RS_2026_02_15 2026-02-15 3795 3617 46 na GCF_000343245.1 PRJNA224116 SAMN01920118 AOVN00000000.1 na 1291336 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2919 strain=Fiocruz LV2919 na latest Contig Major Full 2013-03-01 CA_glsol131 J. Craig Venter Institute GCA_000343245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/245/GCF_000343245.1_CA_glsol131/ na na na haploid bacteria 4613090 4613090 35.000000 0 144 144 NCBI RefSeq GCF_000343245.1-RS_2026_02_15 2026-02-15 3803 3621 44 na GCF_000343265.1 PRJNA224116 SAMN01920127 AOVC00000000.1 na 1291346 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4034 strain=Fiocruz LV4034 na latest Contig Major Full 2013-03-01 CA_glsol159 J. Craig Venter Institute GCA_000343265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/265/GCF_000343265.1_CA_glsol159/ na na na haploid bacteria 4615887 4615887 35.000000 0 138 138 NCBI RefSeq GCF_000343265.1-RS_2026_02_15 2026-02-15 3801 3612 46 na GCF_000343285.1 PRJNA224116 SAMN01920567 AOVB00000000.1 na 1291347 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4211 strain=Fiocruz LV4211 na latest Contig Major Full 2013-03-01 CA_glsol160 J. Craig Venter Institute GCA_000343285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/285/GCF_000343285.1_CA_glsol160/ na na na haploid bacteria 4614427 4614427 35.000000 0 142 142 NCBI RefSeq GCF_000343285.1-RS_2026_02_15 2026-02-15 3816 3649 44 na GCF_000343305.1 PRJNA224116 SAMN01920611 AOUZ00000000.1 na 1291353 173 Leptospira interrogans serovar Icterohaemorrhagiae str. Kantorowic strain=Kantorowic na latest Contig Major Full 2013-03-01 CA_glsol164 J. Craig Venter Institute GCA_000343305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/305/GCF_000343305.1_CA_glsol164/ na na na haploid bacteria 4609240 4609240 35.000000 0 149 149 NCBI RefSeq GCF_000343305.1-RS_2026_02_15 2026-02-15 3818 3627 46 na GCF_000343345.1 PRJNA224116 SAMN01920609 AOWU00000000.1 na 1291360 173 Leptospira interrogans serovar Pomona str. 2006006968 strain=2006006968 na latest Contig Major Full 2013-03-01 CA_glsol039 J. Craig Venter Institute GCA_000343345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/345/GCF_000343345.1_CA_glsol039/ na na na haploid bacteria 4555706 4555706 35.000000 0 224 224 NCBI RefSeq GCF_000343345.1-RS_2026_02_15 2026-02-15 3874 3525 42 na GCF_000343375.1 PRJNA224116 SAMN01920112 AOUV00000000.1 na 1291362 173 Leptospira interrogans serovar Manilae str. UP-OM strain=UP-OM na latest Contig Major Full 2013-03-01 CA_glsol183 J. Craig Venter Institute GCA_000343375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/375/GCF_000343375.1_CA_glsol183/ na na na haploid bacteria 4657516 4657516 35.000000 0 145 145 NCBI RefSeq GCF_000343375.1-RS_2026_02_15 2026-02-15 3875 3627 44 na GCF_000343395.1 PRJNA224116 SAMN01920623 AOXB00000000.1 na 1291304 28183 Leptospira santarosai serovar Szwajizak str. Oregon strain=Oregon na latest Contig Major Full 2013-03-01 CA_glsol025 J. Craig Venter Institute GCA_000343395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/395/GCF_000343395.1_CA_glsol025/ na na na haploid bacteria 3906522 3906522 42.000000 0 123 123 NCBI RefSeq GCF_000343395.1-RS_2026_01_30 2026-01-30 3713 3494 44 na GCF_000343415.1 PRJNA224116 SAMN01920105 AOXA00000000.1 na 1291308 173 Leptospira interrogans serovar Jalna str. 2008720116 strain=2008720116 na latest Contig Major Full 2013-03-01 CA_glsol026 J. Craig Venter Institute GCA_000343415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/415/GCF_000343415.1_CA_glsol026/ na na na haploid bacteria 4649604 4649604 35.000000 0 183 183 NCBI RefSeq GCF_000343415.1-RS_2026_02_15 2026-02-15 3917 3663 43 na GCF_000343435.1 PRJNA224116 SAMN01920628 AOWZ00000000.1 na 1291309 173 Leptospira interrogans serovar Jalna str. 2008720117 strain=2008720117 na latest Contig Major Full 2013-03-01 CA_glsol027 J. Craig Venter Institute GCA_000343435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/435/GCF_000343435.1_CA_glsol027/ na na na haploid bacteria 4637861 4637861 35.000000 0 176 176 NCBI RefSeq GCF_000343435.1-RS_2026_02_15 2026-02-15 3889 3631 42 na GCF_000343455.1 PRJNA224116 SAMN01920108 AOWY00000000.1 na 1291357 173 Leptospira interrogans serovar Pyrogenes str. 2006006973 strain=2006006973 na latest Contig Major Full 2013-03-01 CA_glsol032 J. Craig Venter Institute GCA_000343455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/455/GCF_000343455.1_CA_glsol032/ na na na haploid bacteria 4798347 4798347 35.000000 0 195 195 NCBI RefSeq GCF_000343455.1-RS_2026_02_15 2026-02-15 4049 3791 43 na GCF_000343475.1 PRJNA224116 SAMN01920629 AOWX00000000.1 na 1291315 173 Leptospira interrogans serovar Copenhageni str. 2006006972 strain=2006006972 na latest Contig Major Full 2013-03-01 CA_glsol036 J. Craig Venter Institute GCA_000343475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/475/GCF_000343475.1_CA_glsol036/ na na na haploid bacteria 4597314 4597314 35.000000 0 161 161 NCBI RefSeq GCF_000343475.1-RS_2026_02_15 2026-02-15 3812 3608 42 na GCF_000343495.1 PRJNA224116 SAMN01920592 AOWH00000000.1 na 1291320 173 Leptospira interrogans serovar Copenhageni str. P2431 strain=P2431 na latest Contig Major Full 2013-03-01 CA_glsol072 J. Craig Venter Institute GCA_000343495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/495/GCF_000343495.1_CA_glsol072/ na na na haploid bacteria 4608915 4608915 35.000000 0 154 154 NCBI RefSeq GCF_000343495.1-RS_2026_02_15 2026-02-15 3812 3632 44 na GCF_000343515.1 PRJNA224116 SAMN01920593 AOWF00000000.1 na 1291352 173 Leptospira interrogans serovar Icterohaemorrhagiae str. 201100516 strain=201100516 na latest Contig Major Full 2013-03-01 CA_glsol090 J. Craig Venter Institute GCA_000343515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/515/GCF_000343515.1_CA_glsol090/ na na na haploid bacteria 4619999 4619999 35.000000 0 162 162 NCBI RefSeq GCF_000343515.1-RS_2026_02_15 2026-02-15 3811 3637 42 na GCF_000343535.1 PRJNA224116 SAMN01920621 AOWG00000000.1 na 1291321 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV256 strain=Fiocruz LV256 na latest Contig Major Full 2013-03-01 CA_glsol086 J. Craig Venter Institute GCA_000343535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/535/GCF_000343535.1_CA_glsol086/ na na na haploid bacteria 4593268 4593268 35.000000 0 161 161 NCBI RefSeq GCF_000343535.1-RS_2026_02_15 2026-02-15 3804 3639 42 na GCF_000343555.1 PRJNA224116 SAMN01919806 AOWL00000000.1 na 1291233 29507 Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2 strain=Vehlefans 2 na latest Contig Major Full 2013-03-01 CA_glsol061 J. Craig Venter Institute GCA_000343555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/555/GCF_000343555.1_CA_glsol061/ na na na haploid bacteria 4412676 4412676 36.000000 0 186 186 NCBI RefSeq GCF_000343555.1-RS_2026_02_15 2026-02-15 3732 3505 45 na GCF_000343575.1 PRJNA224116 SAMN01920591 AOVU00000000.1 na 1291330 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4160 strain=Fiocruz LV4160 na latest Contig Major Full 2013-03-01 CA_glsol102 J. Craig Venter Institute GCA_000343575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/575/GCF_000343575.1_CA_glsol102/ na na na haploid bacteria 4617778 4617778 35.000000 0 155 155 NCBI RefSeq GCF_000343575.1-RS_2026_02_15 2026-02-15 3815 3637 45 na GCF_000343595.1 PRJNA224116 SAMN01920617 AOVV00000000.1 na 1291329 173 Leptospira interrogans serovar Copenhageni str. 200701182 strain=200701182 na latest Contig Major Full 2013-03-01 CA_glsol101 J. Craig Venter Institute GCA_000343595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/595/GCF_000343595.1_CA_glsol101/ na na na haploid bacteria 4571977 4571977 35.000000 0 155 155 NCBI RefSeq GCF_000343595.1-RS_2026_02_15 2026-02-15 3789 3614 41 na GCF_000343615.1 PRJNA224116 SAMN01920618 AOVT00000000.1 na 1291331 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2750 strain=Fiocruz LV2750 na latest Contig Major Full 2013-03-01 CA_glsol103 J. Craig Venter Institute GCA_000343615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/615/GCF_000343615.1_CA_glsol103/ na na na haploid bacteria 4610924 4610924 35.000000 0 154 154 NCBI RefSeq GCF_000343615.1-RS_2026_02_15 2026-02-15 3806 3634 45 na GCF_000343635.1 PRJNA224116 SAMN01920604 AOVS00000000.1 na 1291332 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2766 strain=Fiocruz LV2766 na latest Contig Major Full 2013-03-01 CA_glsol108 J. Craig Venter Institute GCA_000343635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/635/GCF_000343635.1_CA_glsol108/ na na na haploid bacteria 4624842 4624842 35.000000 0 146 146 NCBI RefSeq GCF_000343635.1-RS_2026_02_15 2026-02-15 3826 3647 44 na GCF_000343655.1 PRJNA224116 SAMN01920566 AOVP00000000.1 na 1291334 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV2816 strain=Fiocruz LV2816 na latest Contig Major Full 2013-03-01 CA_glsol124 J. Craig Venter Institute GCA_000343655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/655/GCF_000343655.1_CA_glsol124/ na na na haploid bacteria 4636877 4636877 35.000000 0 137 137 NCBI RefSeq GCF_000343655.1-RS_2026_02_15 2026-02-15 3837 3658 45 na GCF_000343675.1 PRJNA224116 SAMN01920121 AOVL00000000.1 na 1291338 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3076 strain=Fiocruz LV3076 na latest Contig Major Full 2013-03-01 CA_glsol139 J. Craig Venter Institute GCA_000343675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/675/GCF_000343675.1_CA_glsol139/ na na na haploid bacteria 4597955 4597955 35.000000 0 133 133 NCBI RefSeq GCF_000343675.1-RS_2026_02_15 2026-02-15 3808 3629 44 na GCF_000343695.1 PRJNA224116 SAMN01920619 AOVK00000000.1 na 1291339 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV3213 strain=Fiocruz LV3213 na latest Contig Major Full 2013-03-01 CA_glsol143 J. Craig Venter Institute GCA_000343695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/695/GCF_000343695.1_CA_glsol143/ na na na haploid bacteria 4632963 4632963 35.000000 0 165 165 NCBI RefSeq GCF_000343695.1-RS_2026_02_15 2026-02-15 3831 3651 46 na GCF_000343715.1 PRJNA224116 SAMN01920587 AOVJ00000000.1 na 1291340 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4212 strain=Fiocruz LV4212 na latest Contig Major Full 2013-03-01 CA_glsol145 J. Craig Venter Institute GCA_000343715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/715/GCF_000343715.1_CA_glsol145/ na na na haploid bacteria 4619742 4619742 35.000000 0 147 147 NCBI RefSeq GCF_000343715.1-RS_2026_02_15 2026-02-15 3821 3647 44 na GCF_000343735.1 PRJNA224116 SAMN01920588 AOVI00000000.1 na 1291341 173 Leptospira interrogans serovar Copenhageni str. Wijnberg strain=Wijnberg na latest Contig Major Full 2013-03-01 CA_glsol146 J. Craig Venter Institute GCA_000343735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/735/GCF_000343735.1_CA_glsol146/ na na na haploid bacteria 4613312 4613312 35.000000 0 151 151 NCBI RefSeq GCF_000343735.1-RS_2026_02_15 2026-02-15 3817 3602 44 na GCF_000343755.1 PRJNA224116 SAMN01920589 AOVH00000000.1 na 1291342 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4217 strain=Fiocruz LV4217 na latest Contig Major Full 2013-03-01 CA_glsol147 J. Craig Venter Institute GCA_000343755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/755/GCF_000343755.1_CA_glsol147/ na na na haploid bacteria 4611364 4611364 35.000000 0 163 163 NCBI RefSeq GCF_000343755.1-RS_2026_02_15 2026-02-15 3811 3637 42 na GCF_000343775.1 PRJNA224116 SAMN01920590 AOVG00000000.1 na 1291343 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4174 strain=Fiocruz LV4174 na latest Contig Major Full 2013-03-01 CA_glsol148 J. Craig Venter Institute GCA_000343775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/775/GCF_000343775.1_CA_glsol148/ na na na haploid bacteria 4625646 4625646 35.000000 0 165 165 NCBI RefSeq GCF_000343775.1-RS_2026_02_15 2026-02-15 3823 3639 44 na GCF_000343795.1 PRJNA224116 SAMN01920124 AOVE00000000.1 na 1291344 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4188 strain=Fiocruz LV4188 na latest Contig Major Full 2013-03-01 CA_glsol150 J. Craig Venter Institute GCA_000343795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/795/GCF_000343795.1_CA_glsol150/ na na na haploid bacteria 4614115 4614115 35.000000 0 167 167 NCBI RefSeq GCF_000343795.1-RS_2026_02_15 2026-02-15 3814 3636 45 na GCF_000343815.1 PRJNA224116 SAMN01920620 AOVF00000000.1 na 1291366 173 Leptospira interrogans str. Fiocruz LV4225 strain=Fiocruz LV4225 na latest Contig Major Full 2013-03-01 CA_glsol149 J. Craig Venter Institute GCA_000343815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/815/GCF_000343815.1_CA_glsol149/ na na na haploid bacteria 4596397 4596397 35.000000 0 147 147 NCBI RefSeq GCF_000343815.1-RS_2026_02_15 2026-02-15 3811 3637 45 na GCF_000343835.1 PRJNA224116 SAMN01920568 AOVA00000000.1 na 1291348 173 Leptospira interrogans serovar Copenhageni str. Fiocruz LV4234 strain=Fiocruz LV4234 na latest Contig Major Full 2013-03-01 CA_glsol161 J. Craig Venter Institute GCA_000343835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/835/GCF_000343835.1_CA_glsol161/ na na na haploid bacteria 4598345 4598345 35.000000 0 168 168 NCBI RefSeq GCF_000343835.1-RS_2026_02_15 2026-02-15 3802 3635 42 na GCF_000343855.1 PRJNA224116 SAMN02469868 ALYM00000000.1 na 1207545 1348 Streptococcus parauberis KRS-02083 strain=KRS-02083 na latest Contig Major Full 2013-03-01 Type1 Gyeongsang National University GCA_000343855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/855/GCF_000343855.1_Type1/ na na na haploid bacteria 2176236 2176236 35.500000 0 12 12 NCBI RefSeq GCF_000343855.1-RS_2026_03_31 2026-03-31 2266 2148 39 24260382 GCF_000343875.1 PRJNA224116 SAMEA2271920 CAOL00000000.1 na 1246119 78331 Mycobacterium canetti CIPT 140070002 strain=CIPT 140070002 STB-E latest Contig Major Full 2013-02-27 ASM34387v1 Institut Pasteur GCA_000343875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/875/GCF_000343875.1_ASM34387v1/ na na na haploid bacteria 4308975 4308975 65.500000 0 587 587 NCBI RefSeq GCF_000343875.1-RS_2026_01_27 2026-01-27 4386 3993 51 23291586 GCF_000343895.1 PRJNA224116 SAMEA2272108 CAOM00000000.1 na 1246120 78331 Mycobacterium canetti CIPT 140070005 strain=CIPT 140070005 STB-G latest Contig Major Full 2013-02-27 ASM34389v1 Institut Pasteur GCA_000343895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/895/GCF_000343895.1_ASM34389v1/ na na na haploid bacteria 4297970 4297970 65.500000 0 516 516 NCBI RefSeq GCF_000343895.1-RS_2026_01_27 2026-01-27 4332 3953 49 23291586 GCF_000343915.1 PRJNA224116 SAMEA2272417 CAON00000000.1 na 1246121 78331 Mycobacterium canetti CIPT 140070013 strain=CIPT 140070013 STB-H latest Contig Major Full 2013-02-27 ASM34391v1 Institut Pasteur GCA_000343915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/915/GCF_000343915.1_ASM34391v1/ na na na haploid bacteria 4341599 4341599 65.500000 0 542 542 NCBI RefSeq GCF_000343915.1-RS_2026_01_27 2026-01-27 4353 3984 51 23291586 GCF_000343935.1 PRJNA224116 SAMEA2272657 CAOO00000000.1 na 1246634 78331 Mycobacterium canetti CIPT 140070007 strain=CIPT 140070007 STB-I latest Contig Major Full 2013-02-27 ASM34393v1 Institut Pasteur GCA_000343935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/935/GCF_000343935.1_ASM34393v1/ na na na haploid bacteria 4414324 4414324 65.500000 0 502 502 NCBI RefSeq GCF_000343935.1-RS_2026_01_27 2026-01-27 4402 4053 51 23291586 GCF_000343955.1 PRJNA224116 SAMEA2272324 CAQT00000000.1 na 1286084 633 Yersinia pseudotuberculosis B-6796 strain=B-6796 C-2 latest Contig Major Full 2013-02-27 ASM34395v1 UPSUD GCA_000343955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/955/GCF_000343955.1_ASM34395v1/ na na na haploid bacteria 4263065 4263065 47.500000 0 262 262 NCBI RefSeq GCF_000343955.1-RS_2026_02_15 2026-02-15 3803 3555 32 na GCF_000343975.1 PRJNA224116 SAMEA2271926 CAQU00000000.1 na 1286085 633 Yersinia pseudotuberculosis B-6862 strain=B-6862 797 latest Contig Major Full 2013-02-27 ASM34397v1 UPSUD GCA_000343975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/975/GCF_000343975.1_ASM34397v1/ na na na haploid bacteria 4272544 4272544 47.500000 0 247 247 NCBI RefSeq GCF_000343975.1-RS_2026_03_28 2026-03-28 3815 3585 30 23580708 GCF_000343995.1 PRJNA224116 SAMEA2272229 CAQV00000000.1 na 1286086 633 Yersinia pseudotuberculosis B-6863 strain=B-6863 1384 latest Contig Major Full 2013-02-27 ASM34399v1 UPSUD GCA_000343995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/343/995/GCF_000343995.1_ASM34399v1/ na na na haploid bacteria 4268655 4268655 47.500000 0 221 221 NCBI RefSeq GCF_000343995.1-RS_2026_03_28 2026-03-28 3800 3565 31 23580708 GCF_000344035.1 PRJNA224116 SAMEA2272757 CAQX00000000.1 na 1286088 633 Yersinia pseudotuberculosis B-6865 strain=B-6865 2430-1 latest Contig Major Full 2013-02-27 ASM34403v1 UPSUD GCA_000344035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/035/GCF_000344035.1_ASM34403v1/ na na na haploid bacteria 4274148 4274148 47.500000 0 240 240 NCBI RefSeq GCF_000344035.1-RS_2026_03_28 2026-03-28 3815 3575 30 23580708 GCF_000344115.1 PRJNA224116 SAMD00020941 BAON00000000.1 na 1291534 257438 Gluconobacter thailandicus NBRC 3255 strain=NBRC 3255 na latest Contig Major Full 2013-02-27 ASM34411v1 Yamaguchi University GCA_000344115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/115/GCF_000344115.1_ASM34411v1/ na na na haploid bacteria 3305227 3305227 56.500000 0 109 109 NCBI RefSeq GCF_000344115.1-RS_2025_12_15 2025-12-15 3121 2978 59 23580707 GCF_000344135.1 PRJNA224116 SAMD00041811 BAOP00000000.1 na 1223542 410332 Gordonia malaquae NBRC 108250 strain=NBRC 108250 na latest Contig Major Full 2013-02-27 ASM34413v1 National Institute of Technology and Evaluation GCA_000344135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/135/GCF_000344135.1_ASM34413v1/ na assembly from type material na haploid bacteria 4465464 4465464 66.500000 0 115 115 NCBI RefSeq GCF_000344135.1-RS_2025_09_02 2025-09-02 4353 4229 59 na GCF_000344155.1 PRJNA224116 SAMD00041809 BAOQ00000000.1 na 1223543 175628 Gordonia paraffinivorans NBRC 108238 strain=NBRC 108238 na latest Contig Major Full 2013-02-27 ASM34415v1 National Institute of Technology and Evaluation GCA_000344155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/155/GCF_000344155.1_ASM34415v1/ na assembly from type material na haploid bacteria 4632332 4632332 69.000000 0 111 111 NCBI RefSeq GCF_000344155.1-RS_2025_09_02 2025-09-02 4254 4086 55 na GCF_000344175.1 PRJNA224116 SAMN02415229 ALWW00000000.1 na 1214117 1069827 Listeria fleischmannii subsp. fleischmannii LU2006-1 strain=LU2006-1 na latest Contig Major Full 2013-03-04 ASM34417v1 Cornell University GCA_000344175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/175/GCF_000344175.1_ASM34417v1/ na assembly from type material na haploid bacteria 2841134 2841134 38.500000 0 102 102 NCBI RefSeq GCF_000344175.1-RS_2026_04_02 2026-04-02 3000 2614 90 23524352 GCF_000344215.1 PRJNA224116 SAMN02471395 AMXM00000000.1 na 1190567 40324 Stenotrophomonas maltophilia EPM1 strain=EPM1 na latest Chromosome Major Full 2013-03-05 EPM1_1.0 Universita degli Studi di Milano GCA_000344215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/215/GCF_000344215.1_EPM1_1.0/ na na na haploid bacteria 4787769 4785869 66.500000 1 1 19 NCBI RefSeq GCF_000344215.1-RS_2026_05_07 2026-05-07 4452 4325 75 23599297 GCF_000344255.1 PRJNA224116 SAMN02469809 AORX00000000.1 na 1282665 1303 Streptococcus oralis subsp. tigurinus 1366 strain=1366 na latest Contig Major Full 2013-03-05 Streptococcus tigurinus 1366 Geneva University Hospitals GCA_000344255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/255/GCF_000344255.1_Streptococcus_tigurinus_1366/ na na na haploid bacteria 1871850 1871850 41.000000 0 14 14 NCBI RefSeq GCF_000344255.1-RS_2025_04_26 2025-04-26 1896 1767 61 23640198 GCF_000344275.1 PRJNA224116 SAMN02469808 AORU00000000.1 na 1282664 1303 Streptococcus oralis subsp. tigurinus AZ_3a strain=AZ_3a na latest Contig Major Full 2013-03-05 Streptococcus tigurinus AZ_3a Geneva University Hospitals GCA_000344275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/275/GCF_000344275.1_Streptococcus_tigurinus_AZ_3a/ na assembly from type material na haploid bacteria 2184662 2184662 40.500000 0 22 22 NCBI RefSeq GCF_000344275.1-RS_2025_11_17 2025-11-17 2200 2053 54 23640198 GCF_000344295.2 PRJNA224116 SAMN02469328 AOTD00000000.1 na 1073353 204 Campylobacter showae CC57C strain=CC57C na latest Contig Minor Full 2013-03-05 velvet BC Cancer Agency GCA_000344295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/295/GCF_000344295.2_velvet/ na na na haploid bacteria 2187351 2187351 45.500000 0 273 273 NCBI RefSeq GCF_000344295.2-RS_2026_02_10 2026-02-10 2284 2146 31 na GCF_000344315.1 PRJNA224116 SAMN01923204 AOSV00000000.1 na 1262666 873 Desulfocurvibacter africanus PCS strain=PCS na latest Contig Major Full 2013-03-05 ASM34431v1 Oak Ridge National Lab GCA_000344315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/315/GCF_000344315.1_ASM34431v1/ na na na haploid bacteria 3929487 3929487 61.000000 0 45 45 NCBI RefSeq GCF_000344315.1-RS_2025_04_26 2025-04-26 3601 3518 61 23580709 GCF_000344335.2 PRJNA224116 SAMN02471921 na na 1104678 317 Pseudomonas syringae pv. actinidiae ICMP 9853 strain=ICMP 9853 na latest Complete Genome Major Full 2017-02-07 ASM34433v2 New Zealand Genomics Limited GCA_000344335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/335/GCF_000344335.2_ASM34433v2/ na na na haploid bacteria 6507519 6507519 58.500000 3 3 3 NCBI RefSeq GCF_000344335.2-RS_2026_03_05 2026-03-05 5921 5470 84 na GCF_000344355.2 PRJNA224116 SAMN02471917 na na 1104679 317 Pseudomonas syringae pv. actinidiae ICMP 18708 strain=ICMP 18708 na latest Complete Genome Major Full 2016-08-23 ASM34435v2 New Zealand Genomics Limited GCA_000344355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/355/GCF_000344355.2_ASM34435v2/ na na na haploid bacteria 6630003 6630003 58.500000 2 2 2 NCBI RefSeq GCF_000344355.2-RS_2026_04_27 2026-04-27 6006 5580 83 23555547 GCF_000344375.1 PRJNA224116 SAMN02471922 ANJD00000000.1 na 1104681 317 Pseudomonas syringae pv. actinidiae ICMP 18800 strain=ICMP 18800 na latest Contig Major Full 2013-03-05 ICMP18800PSA1.0 University of Otago GCA_000344375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/375/GCF_000344375.1_ICMP18800PSA1.0/ na na na haploid bacteria 6228594 6228594 58.500000 0 463 463 NCBI RefSeq GCF_000344375.1-RS_2026_04_30 2026-04-30 5808 5379 64 23555547 GCF_000344395.1 PRJNA224116 SAMN02471913 ANJE00000000.1 na 1104682 317 Pseudomonas syringae pv. actinidiae ICMP 18804 strain=ICMP 18804 na latest Contig Major Full 2013-03-05 ICMP18804v1.0 University of Otago GCA_000344395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/395/GCF_000344395.1_ICMP18804v1.0/ na na na haploid bacteria 6253677 6253677 58.500000 0 263 263 NCBI RefSeq GCF_000344395.1-RS_2026_04_21 2026-04-21 5657 5368 69 23555547 GCF_000344435.1 PRJNA224116 SAMN02471924 ANJG00000000.1 na 1104684 317 Pseudomonas syringae pv. actinidiae TP1 strain=TP1 na latest Contig Major Full 2013-03-05 TP1_PSA1.0 University of Otago GCA_000344435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/435/GCF_000344435.1_TP1_PSA1.0/ na na na haploid bacteria 6220309 6220309 58.500000 0 472 472 NCBI RefSeq GCF_000344435.1-RS_2026_05_01 2026-05-01 5810 5368 66 23555547 GCF_000344455.1 PRJNA224116 SAMN02471914 ANJH00000000.1 na 1104685 317 Pseudomonas syringae pv. actinidiae TP6-1 strain=TP6-1 na latest Contig Major Full 2013-03-05 TP6-1_PSA1.0 University of Otago GCA_000344455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/455/GCF_000344455.1_TP6-1_PSA1.0/ na na na haploid bacteria 6224105 6224105 58.500000 0 483 483 NCBI RefSeq GCF_000344455.1-RS_2026_04_26 2026-04-26 5800 5367 67 23555547 GCF_000344475.3 PRJNA224116 SAMN02471925 na na 1108972 317 Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 strain=Shaanxi_M228 na latest Complete Genome Major Full 2018-10-17 ASM34447v3 University of Otago GCA_000344475.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/475/GCF_000344475.3_ASM34447v3/ na na na haploid bacteria 6747342 6747342 58.500000 2 2 2 NCBI RefSeq GCF_000344475.3-RS_2026_04_30 2026-04-30 6115 5646 85 23555547 GCF_000344495.1 PRJNA224116 SAMN02471916 ANJJ00000000.1 na 1108973 317 Pseudomonas syringae pv. actinidiae str. Shaanxi_M7 strain=Shaanxi_M7 na latest Contig Major Full 2013-03-05 M7PSA1.0 University of Otago GCA_000344495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/495/GCF_000344495.1_M7PSA1.0/ na na na haploid bacteria 6092569 6092569 58.500000 0 1590 1590 NCBI RefSeq GCF_000344495.1-RS_2026_05_01 2026-05-01 6689 5888 66 23555547 GCF_000344515.2 PRJNA224116 SAMN02471915 ANJK00000000.1 na 1248724 317 Pseudomonas syringae pv. actinidiae ICMP 19455 strain=ICMP 19455 na latest Contig Minor Full 2013-03-05 ICMP19455PSA1.0 University of Otago GCA_000344515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/515/GCF_000344515.2_ICMP19455PSA1.0/ na na na haploid bacteria 6221315 6221315 58.500000 0 412 412 NCBI RefSeq GCF_000344515.2-RS_2026_04_26 2026-04-26 5808 5368 69 23555547 GCF_000344535.1 PRJNA224116 SAMN02471920 ANJL00000000.1 na 1194404 317 Pseudomonas syringae pv. actinidiae ICMP 18807 strain=ICMP 18807 na latest Contig Major Full 2013-03-05 ICMP18807v1.0 University of Otago GCA_000344535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/535/GCF_000344535.1_ICMP18807v1.0/ na na na haploid bacteria 6125821 6125821 59.000000 0 148 148 NCBI RefSeq GCF_000344535.1-RS_2026_04_21 2026-04-21 5518 5266 75 23555547 GCF_000344555.1 PRJNA224116 SAMN02471918 ANJM00000000.1 na 1250998 317 Pseudomonas syringae pv. actinidiae ICMP 19439 strain=ICMP 19439 na latest Contig Major Full 2013-03-05 ICMP19439PSA1.0 University of Otago GCA_000344555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/555/GCF_000344555.1_ICMP19439PSA1.0/ na na na haploid bacteria 6216001 6216001 58.500000 0 477 477 NCBI RefSeq GCF_000344555.1-RS_2025_08_20 2025-08-20 5780 5335 68 23555547 GCF_000344575.1 PRJNA224116 SAMD00060995 na na 1046624 1358 Lactococcus lactis subsp. lactis IO-1 strain=IO-1 na latest Complete Genome Major Full 2012-02-04 ASM34457v1 Department of Bioscience, Tokyo University of Agriculture GCA_000344575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/575/GCF_000344575.1_ASM34457v1/ na na na haploid bacteria 2421471 2421471 35.000000 1 1 1 NCBI RefSeq GCF_000344575.1-RS_2026_02_11 2026-02-11 2360 2258 87 22461545 GCF_000344615.1 PRJNA224116 SAMN02261310 APFF00000000.1 na 1075768 1075768 Janthinobacterium sp. CG3 strain=CG3 na latest Scaffold Major Full 2013-03-06 ASM34461v1 JGI GCA_000344615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/615/GCF_000344615.1_ASM34461v1/ na na na haploid bacteria 6265216 6261816 65.500000 0 7 41 NCBI RefSeq GCF_000344615.1-RS_2025_08_25 2025-08-25 5597 5394 95 24265494 GCF_000344685.1 PRJNA245137 SAMN02743873 AFVP00000000.1 reference genome 670483 104355 Gloeophyllum trabeum ATCC 11539 strain=ATCC 11539 na latest Scaffold Major Full 2013-03-21 Glotr1_1 JGI GCA_000344685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/685/GCF_000344685.1_Glotr1_1/ na na na haploid fungi 37178225 34429137 53.000000 0 442 1454 JGI Annotation submitted by JGI 2024-01-02 11883 11753 123 22745431 GCF_000344745.1 PRJNA224116 SAMN02603273 na na 1147161 1423 Bacillus subtilis subsp. subtilis 6051-HGW strain=6051-HGW na latest Complete Genome Major Full 2013-03-06 ASM34474v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000344745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/745/GCF_000344745.1_ASM34474v1/ na assembly from type material na haploid bacteria 4215610 4215610 43.500000 1 1 1 NCBI RefSeq GCF_000344745.1-RS_2025_06_28 2025-06-28 4433 4257 121 22789474 GCF_000344765.1 PRJNA224116 SAMN02603632 na na 1246365 1307 Streptococcus suis SC070731 strain=SC070731 na latest Complete Genome Major Full 2013-03-06 ASM34476v1 Nanjing Agricultural University GCA_000344765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/765/GCF_000344765.1_ASM34476v1/ na na na haploid bacteria 2138568 2138568 41.000000 1 1 1 NCBI RefSeq GCF_000344765.1-RS_2026_01_23 2026-01-23 2092 1948 72 24316490 GCF_000344785.1 PRJNA224116 SAMN02603058 na reference genome 1121353 1721 Corynebacterium callunae DSM 20147 strain=DSM 20147 na latest Complete Genome Major Full 2013-03-06 ASM34478v1 CeBiTec, Bielefeld University GCA_000344785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/785/GCF_000344785.1_ASM34478v1/ na assembly from type material na haploid bacteria 2928683 2928683 52.500000 3 3 3 NCBI RefSeq GCF_000344785.1-RS_2025_11_23 2025-11-23 2769 2634 84 26203323 GCF_000344805.1 PRJNA224116 SAMD00061052 na reference genome 1245469 44255 Bradyrhizobium oligotrophicum S58 strain=S58 na latest Complete Genome Major Full 2013-02-28 ASM34480v1 Tohoku University GCA_000344805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/805/GCF_000344805.1_ASM34480v1/ na assembly from type material na haploid bacteria 8264165 8264165 65.000000 1 1 1 NCBI RefSeq GCF_000344805.1-RS_2025_12_09 2025-12-09 7278 7144 64 23396330 GCF_000344825.1 PRJNA224116 SAMN02415262 AOGJ00000000.1 na 1275974 28901 Salmonella enterica subsp. enterica serovar Newport str. SH111077 strain=SH111077 na latest Contig Major Full 2013-03-07 SOAPdenovo1.05 University of Maryland, College Park GCA_000344825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/825/GCF_000344825.1_SOAPdenovo1.05/ na na na haploid bacteria 4872667 4872667 52.000000 0 93 93 NCBI RefSeq GCF_000344825.1-RS_2025_04_26 2025-04-26 4795 4543 89 23661485 GCF_000344845.1 PRJNA224116 SAMN02415264 AOGI00000000.1 na 1275977 28901 Salmonella enterica subsp. enterica serovar Newport str. Shandong_3 strain=Shandong_3 na latest Contig Major Full 2013-03-07 SOAPdenovo1.05 University of Maryland, College Park GCA_000344845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/845/GCF_000344845.1_SOAPdenovo1.05/ na na na haploid bacteria 4755004 4755004 52.000000 0 66 66 NCBI RefSeq GCF_000344845.1-RS_2025_04_26 2025-04-26 4704 4463 93 23661485 GCF_000344865.1 PRJNA224116 SAMN02415261 AOGG00000000.1 na 1275976 28901 Salmonella enterica subsp. enterica serovar Newport str. JS09102 strain=JS09102 na latest Contig Major Full 2013-03-07 SOAPdenovo1.05 University of Maryland, College Park GCA_000344865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/865/GCF_000344865.1_SOAPdenovo1.05/ na na na haploid bacteria 5084021 5084021 52.000000 0 98 98 NCBI RefSeq GCF_000344865.1-RS_2025_04_26 2025-04-26 5115 4852 101 23661485 GCF_000344885.1 PRJNA224116 SAMN02415263 AOGH00000000.1 na 1275975 28901 Salmonella enterica subsp. enterica serovar Newport str. Henan_3 strain=Henan_3 na latest Contig Major Full 2013-03-07 SOAPdenovo1.05 University of Maryland, College Park GCA_000344885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/885/GCF_000344885.1_SOAPdenovo1.05/ na na na haploid bacteria 4815676 4815676 52.000000 0 77 77 NCBI RefSeq GCF_000344885.1-RS_2025_04_26 2025-04-26 4771 4533 95 23661485 GCF_000344945.2 PRJNA224116 SAMN02436925 APCW00000000.1 na 1159020 210 Helicobacter pylori GAM101Biv strain=GAM101Biv na latest Scaffold Minor Full 2013-03-21 ASM34494v2 Washington University GCA_000344945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/945/GCF_000344945.2_ASM34494v2/ na na na haploid bacteria 1610927 1610427 39.500000 0 52 77 NCBI RefSeq GCF_000344945.2-RS_2026_01_21 2026-01-21 1597 1465 42 na GCF_000344965.2 PRJNA224116 SAMN02436854 APCX00000000.1 na 1159021 210 Helicobacter pylori GAM103Bi strain=GAM103Bi na latest Scaffold Minor Full 2013-03-21 ASM34496v2 Washington University GCA_000344965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/965/GCF_000344965.2_ASM34496v2/ na na na haploid bacteria 1619274 1618754 39.000000 0 44 70 NCBI RefSeq GCF_000344965.2-RS_2026_01_21 2026-01-21 1587 1452 42 na GCF_000344985.2 PRJNA224116 SAMN02436855 APCY00000000.1 na 1159022 210 Helicobacter pylori GAM105Ai strain=GAM105Ai na latest Scaffold Minor Full 2013-03-21 ASM34498v2 Washington University GCA_000344985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/344/985/GCF_000344985.2_ASM34498v2/ na na na haploid bacteria 1666611 1665911 39.000000 0 46 81 NCBI RefSeq GCF_000344985.2-RS_2026_01_21 2026-01-21 1643 1511 42 na GCF_000345005.2 PRJNA224116 SAMN02436856 APCZ00000000.1 na 1159023 210 Helicobacter pylori GAM112Ai strain=GAM112Ai na latest Scaffold Minor Full 2013-03-21 ASM34500v2 Washington University GCA_000345005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/005/GCF_000345005.2_ASM34500v2/ na na na haploid bacteria 1621504 1619804 39.500000 0 50 135 NCBI RefSeq GCF_000345005.2-RS_2026_01_21 2026-01-21 1628 1470 44 na GCF_000345025.2 PRJNA224116 SAMN02436857 APDA00000000.1 na 1159024 210 Helicobacter pylori GAM114Ai strain=GAM114Ai na latest Scaffold Minor Full 2013-03-21 ASM34502v2 Washington University GCA_000345025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/025/GCF_000345025.2_ASM34502v2/ na na na haploid bacteria 1617895 1617235 39.500000 0 30 63 NCBI RefSeq GCF_000345025.2-RS_2026_01_21 2026-01-21 1574 1442 42 na GCF_000345045.2 PRJNA224116 SAMN02436792 APDB00000000.1 na 1159025 210 Helicobacter pylori GAM115Ai strain=GAM115Ai na latest Scaffold Minor Full 2013-03-21 ASM34504v2 Washington University GCA_000345045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/045/GCF_000345045.2_ASM34504v2/ na na na haploid bacteria 1680008 1679368 39.000000 0 57 89 NCBI RefSeq GCF_000345045.2-RS_2026_01_21 2026-01-21 1663 1524 43 na GCF_000345065.2 PRJNA224116 SAMN02436858 APDC00000000.1 na 1159031 210 Helicobacter pylori GAM201Ai strain=GAM201Ai na latest Scaffold Minor Full 2013-03-21 ASM34506v2 Washington University GCA_000345065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/065/GCF_000345065.2_ASM34506v2/ na na na haploid bacteria 1610504 1609944 39.500000 0 48 76 NCBI RefSeq GCF_000345065.2-RS_2026_01_21 2026-01-21 1568 1452 42 na GCF_000345085.2 PRJNA224116 SAMN02436793 APDD00000000.1 na 1159027 210 Helicobacter pylori GAM118Bi strain=GAM118Bi na latest Scaffold Minor Full 2013-03-21 ASM34508v2 Washington University GCA_000345085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/085/GCF_000345085.2_ASM34508v2/ na na na haploid bacteria 1678710 1678010 39.000000 0 59 94 NCBI RefSeq GCF_000345085.2-RS_2026_01_21 2026-01-21 1632 1497 42 na GCF_000345105.2 PRJNA224116 SAMN02436691 APDE00000000.1 na 1159028 210 Helicobacter pylori GAM119Bi strain=GAM119Bi na latest Scaffold Minor Full 2013-03-21 ASM34510v2 Washington University GCA_000345105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/105/GCF_000345105.2_ASM34510v2/ na na na haploid bacteria 1657176 1656556 39.000000 0 46 77 NCBI RefSeq GCF_000345105.2-RS_2026_01_21 2026-01-21 1628 1510 42 na GCF_000345125.2 PRJNA224116 SAMN02436926 APDF00000000.1 na 1159029 210 Helicobacter pylori GAM120Ai strain=GAM120Ai na latest Scaffold Minor Full 2013-03-21 ASM34512v2 Washington University GCA_000345125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/125/GCF_000345125.2_ASM34512v2/ na na na haploid bacteria 1682673 1682213 39.000000 0 51 74 NCBI RefSeq GCF_000345125.2-RS_2026_01_21 2026-01-21 1651 1518 42 na GCF_000345145.2 PRJNA224116 SAMN02436859 APDG00000000.1 na 1159030 210 Helicobacter pylori GAM121Aii strain=GAM121Aii na latest Scaffold Minor Full 2013-03-21 ASM34514v2 Washington University GCA_000345145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/145/GCF_000345145.2_ASM34514v2/ na na na haploid bacteria 1660854 1656840 39.000000 0 50 80 NCBI RefSeq GCF_000345145.2-RS_2026_01_21 2026-01-21 1643 1496 43 na GCF_000345165.2 PRJNA224116 SAMN02436917 APDH00000000.1 na 1159032 210 Helicobacter pylori GAM210Bi strain=GAM210Bi na latest Scaffold Minor Full 2013-03-21 ASM34516v2 Washington University GCA_000345165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/165/GCF_000345165.2_ASM34516v2/ na na na haploid bacteria 1616583 1615783 39.500000 0 50 90 NCBI RefSeq GCF_000345165.2-RS_2026_01_21 2026-01-21 1591 1453 43 na GCF_000345185.2 PRJNA224116 SAMN02436784 APDI00000000.1 na 1159033 210 Helicobacter pylori GAM231Ai strain=GAM231Ai na latest Scaffold Minor Full 2013-03-21 ASM34518v2 Washington University GCA_000345185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/185/GCF_000345185.2_ASM34518v2/ na na na haploid bacteria 1620261 1619481 39.000000 0 58 97 NCBI RefSeq GCF_000345185.2-RS_2026_01_21 2026-01-21 1593 1470 42 na GCF_000345205.2 PRJNA224116 SAMN02436846 APDJ00000000.1 na 1159034 210 Helicobacter pylori GAM239Bi strain=GAM239Bi na latest Scaffold Minor Full 2013-03-21 ASM34520v2 Washington University GCA_000345205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/205/GCF_000345205.2_ASM34520v2/ na na na haploid bacteria 1629248 1628828 39.000000 0 69 90 NCBI RefSeq GCF_000345205.2-RS_2026_01_21 2026-01-21 1604 1471 42 na GCF_000345225.2 PRJNA224116 SAMN02436692 APDK00000000.1 na 1159035 210 Helicobacter pylori GAM244Ai strain=GAM244Ai na latest Scaffold Minor Full 2013-03-21 ASM34522v2 Washington University GCA_000345225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/225/GCF_000345225.2_ASM34522v2/ na na na haploid bacteria 1593270 1592670 39.500000 0 64 94 NCBI RefSeq GCF_000345225.2-RS_2026_01_21 2026-01-21 1585 1433 42 na GCF_000345245.2 PRJNA224116 SAMN02436847 APDL00000000.1 na 1159036 210 Helicobacter pylori GAM245Ai strain=GAM245Ai na latest Scaffold Minor Full 2013-03-21 ASM34524v2 Washington University GCA_000345245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/245/GCF_000345245.2_ASM34524v2/ na na na haploid bacteria 1648500 1647940 39.000000 0 49 77 NCBI RefSeq GCF_000345245.2-RS_2026_01_21 2026-01-21 1608 1470 42 na GCF_000345265.2 PRJNA224116 SAMN02436848 APDM00000000.1 na 1159037 210 Helicobacter pylori GAM246Ai strain=GAM246Ai na latest Scaffold Minor Full 2013-03-21 ASM34526v2 Washington University GCA_000345265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/265/GCF_000345265.2_ASM34526v2/ na na na haploid bacteria 1664415 1663295 39.000000 0 45 101 NCBI RefSeq GCF_000345265.2-RS_2026_01_21 2026-01-21 1645 1519 42 na GCF_000345285.2 PRJNA224116 SAMN02436785 APDN00000000.1 na 1159038 210 Helicobacter pylori GAM249T strain=GAM249T na latest Scaffold Minor Full 2013-03-21 ASM34528v2 Washington University GCA_000345285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/285/GCF_000345285.2_ASM34528v2/ na na na haploid bacteria 1623660 1622820 39.000000 0 39 81 NCBI RefSeq GCF_000345285.2-RS_2026_01_21 2026-01-21 1580 1452 42 na GCF_000345305.2 PRJNA224116 SAMN02436918 APDO00000000.1 na 1159039 210 Helicobacter pylori GAM250AFi strain=GAM250AFi na latest Scaffold Minor Full 2013-03-21 ASM34530v2 Washington University GCA_000345305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/305/GCF_000345305.2_ASM34530v2/ na na na haploid bacteria 1579468 1578968 39.500000 0 45 70 NCBI RefSeq GCF_000345305.2-RS_2026_01_21 2026-01-21 1538 1418 42 na GCF_000345325.2 PRJNA224116 SAMN02436693 APDP00000000.1 na 1159040 210 Helicobacter pylori GAM250T strain=GAM250T na latest Scaffold Minor Full 2013-03-21 ASM34532v2 Washington University GCA_000345325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/325/GCF_000345325.2_ASM34532v2/ na na na haploid bacteria 1579176 1578716 39.500000 0 49 72 NCBI RefSeq GCF_000345325.2-RS_2026_01_21 2026-01-21 1537 1414 43 na GCF_000345345.2 PRJNA224116 SAMN02436849 APDQ00000000.1 na 1159041 210 Helicobacter pylori GAM252Bi strain=GAM252Bi na latest Scaffold Minor Full 2013-03-21 ASM34534v2 Washington University GCA_000345345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/345/GCF_000345345.2_ASM34534v2/ na na na haploid bacteria 1577695 1577195 39.500000 0 46 71 NCBI RefSeq GCF_000345345.2-RS_2026_01_21 2026-01-21 1538 1422 42 na GCF_000345365.2 PRJNA224116 SAMN02436694 APDR00000000.1 na 1159042 210 Helicobacter pylori GAM252T strain=GAM252T na latest Scaffold Minor Full 2013-03-21 ASM34536v2 Washington University GCA_000345365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/365/GCF_000345365.2_ASM34536v2/ na na na haploid bacteria 1578424 1577864 39.500000 0 49 77 NCBI RefSeq GCF_000345365.2-RS_2026_01_21 2026-01-21 1540 1414 42 na GCF_000345385.2 PRJNA224116 SAMN02436919 APDS00000000.1 na 1159043 210 Helicobacter pylori GAM254Ai strain=GAM254Ai na latest Scaffold Minor Full 2013-03-21 ASM34538v2 Washington University GCA_000345385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/385/GCF_000345385.2_ASM34538v2/ na na na haploid bacteria 1636753 1636213 39.000000 0 47 74 NCBI RefSeq GCF_000345385.2-RS_2026_01_21 2026-01-21 1590 1467 42 na GCF_000345405.2 PRJNA224116 SAMN02436850 APDT00000000.1 na 1159044 210 Helicobacter pylori GAM260ASi strain=GAM260ASi na latest Scaffold Minor Full 2013-03-21 ASM34540v2 Washington University GCA_000345405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/405/GCF_000345405.2_ASM34540v2/ na na na haploid bacteria 1628888 1628368 39.500000 0 59 85 NCBI RefSeq GCF_000345405.2-RS_2026_01_21 2026-01-21 1592 1481 42 na GCF_000345425.2 PRJNA224116 SAMN02436851 APDU00000000.1 na 1159045 210 Helicobacter pylori GAM260Bi strain=GAM260Bi na latest Scaffold Minor Full 2013-03-21 ASM34542v2 Washington University GCA_000345425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/425/GCF_000345425.2_ASM34542v2/ na na na haploid bacteria 1666577 1665937 39.000000 0 54 86 NCBI RefSeq GCF_000345425.2-RS_2026_01_21 2026-01-21 1627 1505 42 na GCF_000345445.2 PRJNA224116 SAMN02436852 APDV00000000.1 na 1159046 210 Helicobacter pylori GAM260BSi strain=GAM260BSi na latest Scaffold Minor Full 2013-03-21 ASM34544v2 Washington University GCA_000345445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/445/GCF_000345445.2_ASM34544v2/ na na na haploid bacteria 1573872 1573232 39.500000 0 56 88 NCBI RefSeq GCF_000345445.2-RS_2026_01_21 2026-01-21 1551 1419 42 na GCF_000345465.2 PRJNA224116 SAMN02436920 APDW00000000.1 na 1159047 210 Helicobacter pylori GAM263BFi strain=GAM263BFi na latest Scaffold Minor Full 2013-03-21 ASM34546v2 Washington University GCA_000345465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/465/GCF_000345465.2_ASM34546v2/ na na na haploid bacteria 1647851 1647331 39.000000 0 48 74 NCBI RefSeq GCF_000345465.2-RS_2026_01_21 2026-01-21 1610 1476 42 na GCF_000345485.2 PRJNA224116 SAMN02436853 APDX00000000.1 na 1159048 210 Helicobacter pylori GAM264Ai strain=GAM264Ai na latest Scaffold Minor Full 2013-03-21 ASM34548v2 Washington University GCA_000345485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/485/GCF_000345485.2_ASM34548v2/ na na na haploid bacteria 1603423 1602443 39.500000 0 42 91 NCBI RefSeq GCF_000345485.2-RS_2026_01_21 2026-01-21 1561 1406 42 na GCF_000345505.2 PRJNA224116 SAMN02436695 APDY00000000.1 na 1159049 210 Helicobacter pylori GAM265BSii strain=GAM265BSii na latest Scaffold Minor Full 2013-03-21 ASM34550v2 Washington University GCA_000345505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/505/GCF_000345505.2_ASM34550v2/ na na na haploid bacteria 1660081 1659381 39.000000 0 55 90 NCBI RefSeq GCF_000345505.2-RS_2026_01_21 2026-01-21 1631 1491 42 na GCF_000345525.2 PRJNA224116 SAMN02436786 APDZ00000000.1 na 1159050 210 Helicobacter pylori GAM268Bii strain=GAM268Bii na latest Scaffold Minor Full 2013-03-21 ASM34552v2 Washington University GCA_000345525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/525/GCF_000345525.2_ASM34552v2/ na na na haploid bacteria 1630078 1628898 39.500000 0 64 123 NCBI RefSeq GCF_000345525.2-RS_2026_01_21 2026-01-21 1628 1474 44 na GCF_000345545.2 PRJNA224116 SAMN02436696 APEA00000000.1 na 1159051 210 Helicobacter pylori GAM270ASi strain=GAM270ASi na latest Scaffold Minor Full 2013-03-21 ASM34554v2 Washington University GCA_000345545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/545/GCF_000345545.2_ASM34554v2/ na na na haploid bacteria 1646964 1643485 39.000000 0 43 86 NCBI RefSeq GCF_000345545.2-RS_2026_01_21 2026-01-21 1618 1468 45 na GCF_000345565.2 PRJNA224116 SAMN02436787 APEB00000000.1 na 1159052 210 Helicobacter pylori GAM42Ai strain=GAM42Ai na latest Scaffold Minor Full 2013-03-21 ASM34556v2 Washington University GCA_000345565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/565/GCF_000345565.2_ASM34556v2/ na na na haploid bacteria 1618804 1618064 39.500000 0 42 79 NCBI RefSeq GCF_000345565.2-RS_2026_01_21 2026-01-21 1600 1472 42 na GCF_000345585.2 PRJNA224116 SAMN02436697 APEC00000000.1 na 1159053 210 Helicobacter pylori GAM71Ai strain=GAM71Ai na latest Scaffold Minor Full 2013-03-21 ASM34558v2 Washington University GCA_000345585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/585/GCF_000345585.2_ASM34558v2/ na na na haploid bacteria 1600446 1599386 39.500000 0 70 123 NCBI RefSeq GCF_000345585.2-RS_2026_01_21 2026-01-21 1579 1439 43 na GCF_000345605.2 PRJNA224116 SAMN02436698 APED00000000.1 na 1159054 210 Helicobacter pylori GAM80Ai strain=GAM80Ai na latest Scaffold Minor Full 2013-03-21 ASM34560v2 Washington University GCA_000345605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/605/GCF_000345605.2_ASM34560v2/ na na na haploid bacteria 1637174 1636574 39.000000 0 43 73 NCBI RefSeq GCF_000345605.2-RS_2026_01_21 2026-01-21 1592 1467 42 na GCF_000345625.2 PRJNA224116 SAMN02436699 APEE00000000.1 na 1159055 210 Helicobacter pylori GAM83Bi strain=GAM83Bi na latest Scaffold Minor Full 2013-03-21 ASM34562v2 Washington University GCA_000345625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/625/GCF_000345625.2_ASM34562v2/ na na na haploid bacteria 1606761 1606141 39.500000 0 49 80 NCBI RefSeq GCF_000345625.2-RS_2026_01_21 2026-01-21 1590 1458 42 na GCF_000345645.2 PRJNA224116 SAMN02436700 APEF00000000.1 na 1159056 210 Helicobacter pylori GAM83T strain=GAM83T na latest Scaffold Minor Full 2013-03-21 ASM34564v2 Washington University GCA_000345645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/645/GCF_000345645.2_ASM34564v2/ na na na haploid bacteria 1608444 1607684 39.500000 0 44 82 NCBI RefSeq GCF_000345645.2-RS_2026_01_21 2026-01-21 1592 1464 42 na GCF_000345665.2 PRJNA224116 SAMN02436788 APEG00000000.1 na 1159057 210 Helicobacter pylori GAM93Bi strain=GAM93Bi na latest Scaffold Minor Full 2013-03-21 ASM34566v2 Washington University GCA_000345665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/665/GCF_000345665.2_ASM34566v2/ na na na haploid bacteria 1618619 1616899 39.500000 0 49 135 NCBI RefSeq GCF_000345665.2-RS_2026_01_21 2026-01-21 1596 1434 43 na GCF_000345685.2 PRJNA224116 SAMN02436789 APEH00000000.1 na 1159058 210 Helicobacter pylori GAM96Ai strain=GAM96Ai na latest Scaffold Minor Full 2013-03-21 ASM34568v2 Washington University GCA_000345685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/685/GCF_000345685.2_ASM34568v2/ na na na haploid bacteria 1656751 1655951 39.500000 0 71 111 NCBI RefSeq GCF_000345685.2-RS_2026_01_21 2026-01-21 1639 1503 42 na GCF_000345705.2 PRJNA224116 SAMN02436701 APEI00000000.1 na 1159059 210 Helicobacter pylori GAMchJs106B strain=GAMchJs106B na latest Scaffold Minor Full 2013-03-21 ASM34570v2 Washington University GCA_000345705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/705/GCF_000345705.2_ASM34570v2/ na na na haploid bacteria 1576770 1574399 39.500000 0 31 60 NCBI RefSeq GCF_000345705.2-RS_2026_01_21 2026-01-21 1535 1420 43 na GCF_000345725.2 PRJNA224116 SAMN02436844 APEN00000000.1 na 1159065 210 Helicobacter pylori HP116Bi strain=HP116Bi na latest Scaffold Minor Full 2013-03-21 ASM34572v2 Washington University GCA_000345725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/725/GCF_000345725.2_ASM34572v2/ na na na haploid bacteria 1647421 1647001 39.000000 0 50 71 NCBI RefSeq GCF_000345725.2-RS_2026_01_21 2026-01-21 1612 1485 42 na GCF_000345745.2 PRJNA224116 SAMN02436791 APEO00000000.1 na 1159066 210 Helicobacter pylori HP250AFii strain=HP250AFii na latest Scaffold Minor Full 2013-03-21 ASM34574v2 Washington University GCA_000345745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/745/GCF_000345745.2_ASM34574v2/ na na na haploid bacteria 1579670 1579070 39.500000 0 45 75 NCBI RefSeq GCF_000345745.2-RS_2026_01_21 2026-01-21 1549 1422 42 na GCF_000345765.2 PRJNA224116 SAMN02436778 APEP00000000.1 na 1159067 210 Helicobacter pylori HP250AFiii strain=HP250AFiii na latest Scaffold Minor Full 2013-03-21 ASM34576v2 Washington University GCA_000345765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/765/GCF_000345765.2_ASM34576v2/ na na na haploid bacteria 1578397 1577937 39.500000 0 50 73 NCBI RefSeq GCF_000345765.2-RS_2026_01_21 2026-01-21 1535 1413 42 na GCF_000345785.2 PRJNA224116 SAMN02436779 APEQ00000000.1 na 1159068 210 Helicobacter pylori HP250AFiV strain=HP250AFiV na latest Scaffold Minor Full 2013-03-21 ASM34578v2 Washington University GCA_000345785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/785/GCF_000345785.2_ASM34578v2/ na na na haploid bacteria 1583081 1579634 39.500000 0 42 72 NCBI RefSeq GCF_000345785.2-RS_2026_01_21 2026-01-21 1540 1420 42 na GCF_000345805.2 PRJNA224116 SAMN02436702 APER00000000.1 na 1159069 210 Helicobacter pylori HP250ASi strain=HP250ASi na latest Scaffold Minor Full 2013-03-21 ASM34580v2 Washington University GCA_000345805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/805/GCF_000345805.2_ASM34580v2/ na na na haploid bacteria 1579080 1578560 39.500000 0 50 76 NCBI RefSeq GCF_000345805.2-RS_2026_01_21 2026-01-21 1544 1421 42 na GCF_000345825.2 PRJNA224116 SAMN02436780 APES00000000.1 na 1159070 210 Helicobacter pylori HP250ASii strain=HP250ASii na latest Scaffold Minor Full 2013-03-21 ASM34582v2 Washington University GCA_000345825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/825/GCF_000345825.2_ASM34582v2/ na na na haploid bacteria 1580075 1579395 39.500000 0 43 77 NCBI RefSeq GCF_000345825.2-RS_2026_01_21 2026-01-21 1543 1419 42 na GCF_000345845.2 PRJNA224116 SAMN02436845 APET00000000.1 na 1159071 210 Helicobacter pylori HP250BFi strain=HP250BFi na latest Scaffold Minor Full 2013-03-21 ASM34584v2 Washington University GCA_000345845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/845/GCF_000345845.2_ASM34584v2/ na na na haploid bacteria 1591163 1585911 39.500000 0 49 134 NCBI RefSeq GCF_000345845.2-RS_2026_01_21 2026-01-21 1585 1451 41 na GCF_000345865.2 PRJNA224116 SAMN02436703 APEU00000000.1 na 1159072 210 Helicobacter pylori HP250BFii strain=HP250BFii na latest Scaffold Minor Full 2013-03-21 ASM34586v2 Washington University GCA_000345865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/865/GCF_000345865.2_ASM34586v2/ na na na haploid bacteria 1582749 1582149 39.500000 0 42 72 NCBI RefSeq GCF_000345865.2-RS_2026_01_21 2026-01-21 1540 1413 42 na GCF_000345885.2 PRJNA224116 SAMN02436781 APEV00000000.1 na 1159073 210 Helicobacter pylori HP250BFiii strain=HP250BFiii na latest Scaffold Minor Full 2013-03-21 ASM34588v2 Washington University GCA_000345885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/885/GCF_000345885.2_ASM34588v2/ na na na haploid bacteria 1581371 1580771 39.500000 0 46 76 NCBI RefSeq GCF_000345885.2-RS_2026_01_21 2026-01-21 1542 1419 42 na GCF_000345905.2 PRJNA224116 SAMN02436782 APEW00000000.1 na 1159074 210 Helicobacter pylori HP250BFiV strain=HP250BFiV na latest Scaffold Minor Full 2013-03-21 ASM34590v2 Washington University GCA_000345905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/905/GCF_000345905.2_ASM34590v2/ na na na haploid bacteria 1581143 1578522 39.500000 0 45 90 NCBI RefSeq GCF_000345905.2-RS_2026_01_21 2026-01-21 1551 1422 44 na GCF_000345925.2 PRJNA224116 SAMN02436922 APEX00000000.1 na 1159075 210 Helicobacter pylori HP250BSi strain=HP250BSi na latest Scaffold Minor Full 2013-03-21 ASM34592v2 Washington University GCA_000345925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/925/GCF_000345925.2_ASM34592v2/ na na na haploid bacteria 1578241 1577361 39.500000 0 48 92 NCBI RefSeq GCF_000345925.2-RS_2026_01_21 2026-01-21 1544 1409 42 na GCF_000345945.2 PRJNA224116 SAMN02436923 APEY00000000.1 na 1159076 210 Helicobacter pylori HP260AFi strain=HP260AFi na latest Scaffold Minor Full 2013-03-21 ASM34594v2 Washington University GCA_000345945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/945/GCF_000345945.2_ASM34594v2/ na na na haploid bacteria 1632900 1632520 39.500000 0 55 74 NCBI RefSeq GCF_000345945.2-RS_2026_01_21 2026-01-21 1598 1477 42 na GCF_000345965.2 PRJNA224116 SAMN02436924 APEZ00000000.1 na 1159077 210 Helicobacter pylori HP260AFii strain=HP260AFii na latest Scaffold Minor Full 2013-03-21 ASM34596v2 Washington University GCA_000345965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/965/GCF_000345965.2_ASM34596v2/ na na na haploid bacteria 1631408 1630948 39.500000 0 57 80 NCBI RefSeq GCF_000345965.2-RS_2026_01_21 2026-01-21 1600 1480 42 na GCF_000345985.2 PRJNA224116 SAMN02436783 APFA00000000.1 na 1159078 210 Helicobacter pylori HP260ASii strain=HP260ASii na latest Scaffold Minor Full 2013-03-21 ASM34598v2 Washington University GCA_000345985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/345/985/GCF_000345985.2_ASM34598v2/ na na na haploid bacteria 1633276 1632676 39.500000 0 55 85 NCBI RefSeq GCF_000345985.2-RS_2026_01_21 2026-01-21 1608 1484 42 na GCF_000346005.2 PRJNA224116 SAMN02436916 APFB00000000.1 na 1159079 210 Helicobacter pylori HP260BFii strain=HP260BFii na latest Scaffold Minor Full 2013-03-21 ASM34600v2 Washington University GCA_000346005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/005/GCF_000346005.2_ASM34600v2/ na na na haploid bacteria 1576856 1576436 39.500000 0 50 71 NCBI RefSeq GCF_000346005.2-RS_2026_01_21 2026-01-21 1553 1427 42 na GCF_000346025.2 PRJNA224116 SAMN02436704 APFC00000000.1 na 1159080 210 Helicobacter pylori HP260Bi strain=HP260Bi na latest Scaffold Minor Full 2013-03-21 ASM34602v2 Washington University GCA_000346025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/025/GCF_000346025.2_ASM34602v2/ na na na haploid bacteria 1667736 1667176 39.000000 0 53 81 NCBI RefSeq GCF_000346025.2-RS_2026_01_21 2026-01-21 1624 1506 42 na GCF_000346065.1 PRJNA224116 SAMN02603522 na na 1286640 382 Sinorhizobium meliloti 2011 strain=2011 na latest Complete Genome Major Full 2013-03-08 ASM34606v1 LIPM-INRA/CNRS GCA_000346065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/065/GCF_000346065.1_ASM34606v1/ na na na haploid bacteria 6693185 6693185 62.000000 3 3 3 NCBI RefSeq GCF_000346065.1-RS_2025_04_02 2025-04-02 6355 6022 68 23599422 GCF_000346085.2 PRJNA224116 SAMEA2272050 CAUD000000000.2 na 1293500 2039 Tropheryma whipplei str. Neuro1 strain=Neuro1 na latest Scaffold Major Full 2013-08-30 ASM34608v2 ebi GCA_000346085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/085/GCF_000346085.2_ASM34608v2/ na na na haploid bacteria 927567 883027 46.500000 0 1 186 NCBI RefSeq GCF_000346085.2-RS_2026_04_02 2026-04-02 863 806 48 na GCF_000346105.2 PRJNA224116 SAMEA2272702 CAUF000000000.2 na 1293895 2039 Tropheryma whipplei str. Art1 strain=Art1 na latest Scaffold Major Full 2013-10-02 ASM34610v2 ebi GCA_000346105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/105/GCF_000346105.2_ASM34610v2/ na na na haploid bacteria 927575 883379 46.500000 0 1 175 NCBI RefSeq GCF_000346105.2-RS_2026_04_02 2026-04-02 876 812 49 na GCF_000346125.2 PRJNA224116 SAMD00036668 BAOR00000000.1 na 1297799 277 Meiothermus ruber H328 strain=H328 na latest Scaffold Major Full 2015-07-15 ASM34612v2 Division of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University GCA_000346125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/125/GCF_000346125.2_ASM34612v2/ na na na haploid bacteria 3029287 3019774 63.500000 0 1 4 NCBI RefSeq GCF_000346125.2-RS_2026_01_24 2026-01-24 3065 2951 56 23640376 GCF_000346225.2 PRJNA224116 SAMN02469436 na na 1206777 1206777 Pseudomonas sp. Lz4W strain=Lz4W na latest Complete Genome Major Full 2017-12-07 ASM34622v2 Centre for Cellular and Molecular Biology GCA_000346225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/225/GCF_000346225.2_ASM34622v2/ na na na haploid bacteria 5018820 5018820 58.500000 1 1 1 NCBI RefSeq GCF_000346225.2-RS_2024_08_14 2024-08-14 4544 4426 81 23788547 GCF_000346255.1 PRJNA224116 SAMN02469798 AHKL00000000.1 na 1129895 1393 Brevibacillus brevis FJAT-0809-GLX strain=FJAT-0809-GLX na latest Contig Major Full 2013-03-12 FJAT-GLX-0809 FJAT, Fujian Academy of Agriculture Sciences GCA_000346255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/255/GCF_000346255.1_FJAT-GLX-0809/ na na na haploid bacteria 6020449 6020449 47.500000 0 72 72 NCBI RefSeq GCF_000346255.1-RS_2025_04_26 2025-04-26 5704 5551 86 23618715 GCF_000346295.1 PRJNA224116 SAMN02261082 ANOG00000000.1 reference genome 1265738 1265734 Rhodopirellula maiorica SM1 strain=SM1 na latest Contig Major Full 2013-03-12 ASM34629v1 Microbial Interactions in MArine Systems (MIMAS) GCA_000346295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/295/GCF_000346295.1_ASM34629v1/ na assembly from type material na haploid bacteria 8874084 8874084 54.500000 0 1132 1132 NCBI RefSeq GCF_000346295.1-RS_2026_03_31 2026-03-31 7054 6687 94 23273849 GCF_000346315.1 PRJNA224116 SAMN02261080 ANOF00000000.1 na 1263868 1263866 Rhodopirellula europaea SH398 strain=SH398 na latest Contig Major Full 2013-03-12 ASM34631v1 Microbial Interactions in MArine Systems (MIMAS) GCA_000346315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/315/GCF_000346315.1_ASM34631v1/ na na na haploid bacteria 7446194 7446194 56.000000 0 208 208 NCBI RefSeq GCF_000346315.1-RS_2025_11_20 2025-11-20 5588 5446 58 23273849 GCF_000346425.1 PRJNA224116 SAMN02261083 ANOQ00000000.1 na 595460 595460 Rhodopirellula sp. SWK7 strain=SWK7 na latest Contig Major Full 2013-03-14 ASM34642v1 Microbial Interactions in MArine Systems (MIMAS) GCA_000346425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/425/GCF_000346425.1_ASM34642v1/ na na na haploid bacteria 8777069 8777069 56.000000 0 141 141 NCBI RefSeq GCF_000346425.1-RS_2024_12_30 2024-12-30 6262 6141 72 23273849 GCF_000346445.1 PRJNA224116 SAMN02469852 APIT00000000.1 na 1235458 40324 Stenotrophomonas maltophilia AU12-09 strain=AU12-09 na latest Contig Major Full 2013-03-14 ASM34644v1 Griffith University GCA_000346445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/445/GCF_000346445.1_ASM34644v1/ na na na haploid bacteria 4547300 4547300 66.500000 0 125 125 NCBI RefSeq GCF_000346445.1-RS_2025_05_20 2025-05-20 4284 4141 76 23640378 GCF_000346485.2 PRJNA224116 SAMN02469880 ANNX00000000.2 reference genome 128403 34078 Scytonema hofmannii PCC 7110 strain=PCC 7110 na latest Scaffold Major Full 2016-03-16 ASM34648v2 Heinrich-Heine-University Duesseldorf GCA_000346485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/485/GCF_000346485.2_ASM34648v2/ na assembly from type material na haploid bacteria 12294410 12288939 41.500000 0 40 86 NCBI RefSeq GCF_000346485.2-RS_2026_03_11 2026-03-11 11014 10552 97 23221676 GCF_000346505.1 PRJNA224116 SAMN02261081 ANOH00000000.1 reference genome 1263870 1263869 Aporhodopirellula sallentina SM41 strain=SM41 na latest Contig Major Full 2013-03-14 ASM34650v1 Microbial Interactions in MArine Systems (MIMAS) GCA_000346505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/505/GCF_000346505.1_ASM34650v1/ na assembly from type material na haploid bacteria 8186686 8186686 56.500000 0 491 491 NCBI RefSeq GCF_000346505.1-RS_2025_11_20 2025-11-20 5974 5756 73 23273849 GCF_000346525.1 PRJNA224116 SAMN02469753 AOUD00000000.1 na 1292388 263 Francisella tularensis subsp. tularensis 3571 strain=3571 na latest Contig Major Full 2013-03-14 H642_1.0 Dugway Proving Ground GCA_000346525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/525/GCF_000346525.1_H642_1.0/ na na na haploid bacteria 1816930 1816930 32.500000 0 26 26 NCBI RefSeq GCF_000346525.1-RS_2026_02_17 2026-02-17 1901 1653 42 na GCF_000346595.1 PRJNA224116 SAMN02604078 na na 1174529 34021 Candidatus Liberibacter asiaticus str. gxpsy strain=gxpsy na latest Complete Genome Major Full 2013-03-14 ASM34659v1 United States Department of Agriculture GCA_000346595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/595/GCF_000346595.1_ASM34659v1/ na na na haploid bacteria 1268237 1268237 36.500000 1 1 1 NCBI RefSeq GCF_000346595.1-RS_2026_04_01 2026-04-01 1156 1077 56 23640196 GCF_000346615.1 PRJNA224116 SAMN01823367 ANNU00000000.1 reference genome 1124780 1265690 Nafulsella turpanensis ZLM-10 strain=ZLM-10 na latest Contig Major Full 2013-03-14 NafTru1.0 Northwest A&F University GCA_000346615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/615/GCF_000346615.1_NafTru1.0/ na assembly from type material na haploid bacteria 4805588 4805588 45.500000 0 109 109 NCBI RefSeq GCF_000346615.1-RS_2025_12_09 2025-12-09 4142 4052 49 24699960 GCF_000346635.1 PRJNA224116 SAMN02470704 AOIG00000000.1 reference genome 1434724 1434724 Paenibacillus shenyangensis strain=A9 na latest Contig Major Full 2013-03-14 Paenibacillus A9 Northeastern University GCA_000346635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/635/GCF_000346635.1_Paenibacillus_A9/ na assembly from type material na haploid bacteria 5485683 5485683 46.500000 0 67 67 NCBI RefSeq GCF_000346635.1-RS_2025_08_27 2025-08-27 4863 4760 65 23618713 GCF_000346655.1 PRJNA224116 SAMN01801600 AOHH00000000.1 na 1218586 28182 Leptospira noguchii str. Bonito strain=Bonito na latest Contig Major Full 2013-03-14 gls454072v02 J. Craig Venter Institute GCA_000346655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/655/GCF_000346655.1_gls454072v02/ na na na haploid bacteria 4498978 4498978 35.500000 0 309 309 NCBI RefSeq GCF_000346655.1-RS_2025_08_25 2025-08-25 3752 3421 42 na GCF_000346675.1 PRJNA224116 SAMN01886732 AOHI00000000.1 na 1193013 1193013 Leptospira sp. Fiocruz LV4135 strain=Fiocruz LV4135 na latest Contig Major Full 2013-03-14 gls454076v02 J. Craig Venter Institute GCA_000346675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/675/GCF_000346675.1_gls454076v02/ na na na haploid bacteria 4002389 4002389 41.500000 0 133 133 NCBI RefSeq GCF_000346675.1-RS_2024_08_13 2024-08-13 3775 3535 45 na GCF_000346695.1 PRJNA224116 SAMN01886735 AOHJ00000000.1 na 1240692 173 Leptospira interrogans serovar Pomona str. CSL10083 strain=CSL10083 na latest Contig Major Full 2013-03-14 gls454200v02 J. Craig Venter Institute GCA_000346695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/695/GCF_000346695.1_gls454200v02/ na na na haploid bacteria 4574387 4574387 35.000000 0 182 182 NCBI RefSeq GCF_000346695.1-RS_2026_02_17 2026-02-17 3846 3522 44 na GCF_000346755.1 PRJNA224116 SAMN02469871 ANNV00000000.1 na 1163065 1163065 Pseudomonas sp. CBZ-4 strain=CBZ-4 na latest Contig Major Full 2013-03-15 CBZ-4 Harbin Institute of Technology GCA_000346755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/755/GCF_000346755.1_CBZ-4/ na na na haploid bacteria 6497331 6497331 61.000000 0 186 186 NCBI RefSeq GCF_000346755.1-RS_2024_08_21 2024-08-21 5915 5746 63 na GCF_000346775.1 PRJNA224116 SAMN02469932 ANOR00000000.1 na 1262454 294 Pseudomonas fluorescens Pf29Arp strain=Pf29Arp na latest Scaffold Major Full 2013-03-18 Pf29Arp_v1 INRA GCA_000346775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/775/GCF_000346775.1_Pf29Arp_v1/ na na na haploid bacteria 6131803 6118103 61.000000 0 69 206 NCBI RefSeq GCF_000346775.1-RS_2024_12_31 2024-12-31 5645 5426 62 23754720 GCF_000346815.2 PRJNA224116 SAMN02436842 APEJ00000000.1 na 1159060 210 Helicobacter pylori GAMchJs114i strain=GAMchJs114i na latest Scaffold Minor Full 2013-03-21 ASM34681v2 Washington University GCA_000346815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/815/GCF_000346815.2_ASM34681v2/ na na na haploid bacteria 1611908 1611448 39.500000 0 52 75 NCBI RefSeq GCF_000346815.2-RS_2026_01_21 2026-01-21 1575 1462 42 na GCF_000346835.2 PRJNA224116 SAMN02436921 APEK00000000.1 na 1159061 210 Helicobacter pylori GAMchJs117Ai strain=GAMchJs117Ai na latest Scaffold Minor Full 2013-03-21 ASM34683v2 Washington University GCA_000346835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/835/GCF_000346835.2_ASM34683v2/ na na na haploid bacteria 1612146 1611686 39.500000 0 49 72 NCBI RefSeq GCF_000346835.2-RS_2026_01_21 2026-01-21 1585 1469 42 na GCF_000346855.2 PRJNA224116 SAMN02436790 APEL00000000.1 na 1159062 210 Helicobacter pylori GAMchJs124i strain=GAMchJs124i na latest Scaffold Minor Full 2013-03-21 ASM34685v2 Washington University GCA_000346855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/855/GCF_000346855.2_ASM34685v2/ na na na haploid bacteria 1612261 1611701 39.500000 0 48 76 NCBI RefSeq GCF_000346855.2-RS_2026_01_21 2026-01-21 1565 1440 42 na GCF_000346875.2 PRJNA224116 SAMN02436843 APEM00000000.1 na 1159064 210 Helicobacter pylori GAMchJs136i strain=GAMchJs136i na latest Scaffold Minor Full 2013-03-21 ASM34687v2 Washington University GCA_000346875.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/875/GCF_000346875.2_ASM34687v2/ na na na haploid bacteria 1655171 1654711 39.000000 0 62 85 NCBI RefSeq GCF_000346875.2-RS_2026_01_21 2026-01-21 1623 1501 43 na GCF_000346895.1 PRJNA224116 SAMN01801607 ANIM00000000.1 na 1218584 29507 Leptospira kirschneri str. JB strain=JB na latest Contig Major Full 2013-03-15 gls454198v01 J. Craig Venter Institute GCA_000346895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/895/GCF_000346895.1_gls454198v01/ na na na haploid bacteria 4360155 4360155 36.000000 0 157 157 NCBI RefSeq GCF_000346895.1-RS_2026_02_15 2026-02-15 3675 3407 44 na GCF_000346915.1 PRJNA224116 SAMN01047922 ANNW00000000.1 na 1049981 28183 Leptospira santarosai str. HAI1349 strain=HAI1349 na latest Contig Major Full 2013-03-15 gls454169v01 J. Craig Venter Institute GCA_000346915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/915/GCF_000346915.1_gls454169v01/ na na na haploid bacteria 3851754 3851754 41.500000 0 114 114 NCBI RefSeq GCF_000346915.1-RS_2026_01_30 2026-01-30 3576 3371 42 na GCF_000346935.1 PRJNA224116 SAMN01801580 ANNL00000000.1 na 1218582 173 Leptospira interrogans serovar Valbuzzi str. Duyster strain=Duyster na latest Contig Major Full 2013-03-15 gls454013v01 J. Craig Venter Institute GCA_000346935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/935/GCF_000346935.1_gls454013v01/ na na na haploid bacteria 4672622 4672622 35.000000 0 142 142 NCBI RefSeq GCF_000346935.1-RS_2026_02_15 2026-02-15 4054 3705 42 na GCF_000346955.1 PRJNA224116 SAMN01801598 ANMY00000000.1 na 1218600 1218600 Leptospira sp. P2653 strain=P2653 na latest Contig Major Full 2013-03-15 gls454051v01 J. Craig Venter Institute GCA_000346955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/955/GCF_000346955.1_gls454051v01/ na na na haploid bacteria 4175074 4175074 41.000000 0 178 178 NCBI RefSeq GCF_000346955.1-RS_2024_08_13 2024-08-13 3853 3603 42 na GCF_000346975.1 PRJNA224116 SAMN01801594 ANMU00000000.1 na 1303729 174 Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee strain=Sponselee CDC na latest Contig Major Full 2013-03-15 gls454016v01 J. Craig Venter Institute GCA_000346975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/346/975/GCF_000346975.1_gls454016v01/ na na na haploid bacteria 3776198 3776198 40.000000 0 196 196 NCBI RefSeq GCF_000346975.1-RS_2024_09_03 2024-09-03 3458 2939 42 na GCF_000347015.1 PRJNA224116 SAMN01801602 ANII00000000.1 na 1218583 29507 Leptospira kirschneri str. MMD1493 strain=MMD1493 na latest Contig Major Full 2013-03-15 gls454176v01 J. Craig Venter Institute GCA_000347015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/015/GCF_000347015.1_gls454176v01/ na na na haploid bacteria 4289160 4289160 36.000000 0 161 161 NCBI RefSeq GCF_000347015.1-RS_2026_02_15 2026-02-15 3591 3344 40 na GCF_000347035.1 PRJNA224116 SAMN01801603 ANIJ00000000.1 na 1242992 1242992 Leptospira sp. B5-022 strain=B5-022 na latest Contig Major Full 2013-03-15 gls454192v01 J. Craig Venter Institute GCA_000347035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/035/GCF_000347035.1_gls454192v01/ na na na haploid bacteria 4180037 4180037 41.500000 0 49 49 NCBI RefSeq GCF_000347035.1-RS_2024_08_13 2024-08-13 3820 3757 47 na GCF_000347055.1 PRJNA224116 SAMN01801596 ANMX00000000.1 na 1218579 173 Leptospira interrogans str. 2003000735 strain=2003000735 na latest Contig Major Full 2013-03-15 gls454034v01 J. Craig Venter Institute GCA_000347055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/055/GCF_000347055.1_gls454034v01/ na na na haploid bacteria 4893012 4893012 35.500000 0 223 223 NCBI RefSeq GCF_000347055.1-RS_2026_02_06 2026-02-06 4227 3958 42 na GCF_000347075.1 PRJNA224116 SAMN01801605 ANIL00000000.1 na 1218585 29508 Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 strain=Veldrot Semarang 173 na latest Contig Major Full 2013-03-15 gls454196v01 J. Craig Venter Institute GCA_000347075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/075/GCF_000347075.1_gls454196v01/ na na na haploid bacteria 4103611 4103611 38.000000 0 31 31 NCBI RefSeq GCF_000347075.1-RS_2026_02_08 2026-02-08 3892 3811 43 na GCF_000347115.1 PRJNA224116 SAMN01801595 ANMW00000000.1 na 1218578 173 Leptospira interrogans str. 2002000632 strain=2002000632 na latest Contig Major Full 2013-03-15 gls454033v01 J. Craig Venter Institute GCA_000347115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/115/GCF_000347115.1_gls454033v01/ na na na haploid bacteria 4896897 4896897 35.500000 0 217 217 NCBI RefSeq GCF_000347115.1-RS_2026_02_06 2026-02-06 4237 3963 43 na GCF_000347135.1 PRJNA224116 SAMN01801593 ANMV00000000.1 na 1218577 173 Leptospira interrogans str. 2002000631 strain=2002000631 na latest Contig Major Full 2013-03-15 gls454032v01 J. Craig Venter Institute GCA_000347135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/135/GCF_000347135.1_gls454032v01/ na na na haploid bacteria 4847936 4847936 35.000000 0 224 224 NCBI RefSeq GCF_000347135.1-RS_2026_02_06 2026-02-06 4156 3926 42 na GCF_000347155.1 PRJNA224116 SAMN01801606 ANMZ00000000.1 na 1240691 173 Leptospira interrogans serovar Pomona str. CSL4002 strain=CSL4002 na latest Contig Major Full 2013-03-15 gls454197v01 J. Craig Venter Institute GCA_000347155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/155/GCF_000347155.1_gls454197v01/ na na na haploid bacteria 4591338 4591338 35.000000 0 187 187 NCBI RefSeq GCF_000347155.1-RS_2026_02_15 2026-02-15 3857 3534 44 na GCF_000347175.1 PRJNA224116 SAMN01801604 ANIK00000000.1 reference genome 1218565 28452 Leptospira alstonii serovar Sichuan str. 79601 strain=79601 na latest Contig Major Full 2013-03-15 gls454194v01 J. Craig Venter Institute GCA_000347175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/175/GCF_000347175.1_gls454194v01/ na assembly from type material na haploid bacteria 4436408 4436408 42.500000 0 125 125 NCBI RefSeq GCF_000347175.1-RS_2025_12_13 2025-12-13 4102 3866 46 na GCF_000347195.1 PRJNA224116 SAMN01801601 ANIG00000000.1 na 1242991 1242990 Leptospira sp. serovar Kenya str. Sh9 strain=Sh9 na latest Contig Major Full 2013-03-15 gls454066v01 J. Craig Venter Institute GCA_000347195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/195/GCF_000347195.1_gls454066v01/ na na na haploid bacteria 3995129 3995129 40.000000 0 95 95 NCBI RefSeq GCF_000347195.1-RS_2024_08_13 2024-08-13 3601 3360 43 na GCF_000347215.1 PRJNA224116 SAMN01801597 ANIF00000000.1 na 1240688 29507 Leptospira kirschneri serovar Bim str. PUO 1247 strain=PUO 1247 na latest Contig Major Full 2013-03-15 gls454042v01 J. Craig Venter Institute GCA_000347215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/215/GCF_000347215.1_gls454042v01/ na na na haploid bacteria 4377203 4377203 36.000000 0 158 158 NCBI RefSeq GCF_000347215.1-RS_2026_02_15 2026-02-15 3659 3449 44 na GCF_000347235.1 PRJNA224116 SAMN01798240 ANCE00000000.1 na 1240687 29507 Leptospira kirschneri serovar Bulgarica str. Nikolaevo strain=Nikolaevo na latest Contig Major Full 2013-03-15 gls454008v01 J. Craig Venter Institute GCA_000347235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/235/GCF_000347235.1_gls454008v01/ na na na haploid bacteria 4489381 4489381 36.500000 0 221 221 NCBI RefSeq GCF_000347235.1-RS_2026_02_15 2026-02-15 3882 3594 44 na GCF_000347255.1 PRJNA224116 SAMN01162021 ANCF00000000.1 na 1193042 173 Leptospira interrogans str. Kito strain=Kito na latest Contig Major Full 2013-03-15 gls454075v01 J. Craig Venter Institute GCA_000347255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/255/GCF_000347255.1_gls454075v01/ na na na haploid bacteria 4684013 4684013 35.000000 0 197 197 NCBI RefSeq GCF_000347255.1-RS_2026_02_15 2026-02-15 3919 3634 42 na GCF_000347315.1 PRJNA224116 SAMN02469329 AOUL00000000.1 na 1297579 851 Fusobacterium nucleatum CC53 strain=CC53 na latest Contig Major Full 2013-03-18 SSAKE_FusoCC53 BC Cancer Agency GCA_000347315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/315/GCF_000347315.1_SSAKE_FusoCC53/ na na na haploid bacteria 2069558 2069558 27.000000 0 379 379 NCBI RefSeq GCF_000347315.1-RS_2025_08_14 2025-08-14 2023 1883 67 22009989 GCF_000347415.1 PRJNA224116 SAMEA2272798 CAQC00000000.1 na 1266070 1311 Streptococcus agalactiae SS1014 strain=SS1014 na latest Scaffold Major Full 2013-03-13 ASM34741v1 IP GCA_000347415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/415/GCF_000347415.1_ASM34741v1/ na na na haploid bacteria 1986992 1986972 35.000000 0 99 101 NCBI RefSeq GCF_000347415.1-RS_2026_01_12 2026-01-12 2019 1940 17 23586779 GCF_000347435.1 PRJNA224116 SAMEA2272311 CAQB00000000.1 na 1266069 1311 Streptococcus agalactiae CF01173 strain=CF01173 na latest Scaffold Major Full 2013-03-13 ASM34743v1 IP GCA_000347435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/435/GCF_000347435.1_ASM34743v1/ na na na haploid bacteria 2024610 2024600 35.500000 0 131 132 NCBI RefSeq GCF_000347435.1-RS_2026_01_03 2026-01-03 2041 1936 20 23586779 GCF_000347495.1 PRJNA224116 SAMN02469951 AOCL00000000.1 na 1276919 670 Vibrio parahaemolyticus PCV08-7 strain=PCV08-7 na latest Contig Major Full 2013-03-18 VibParPCV08-7 1.0 University of Malaya GCA_000347495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/495/GCF_000347495.1_VibParPCV08-7_1.0/ na na na haploid bacteria 5184985 5184985 45.500000 0 83 83 NCBI RefSeq GCF_000347495.1-RS_2026_02_15 2026-02-15 4721 4575 87 na GCF_000347515.1 PRJNA224116 SAMN02471400 APHP00000000.1 na 1284223 1590 Lactiplantibacillus plantarum UCMA 3037 strain=UCMA 3037 na latest Scaffold Major Full 2013-03-20 Assemblage de novo Universite de Caen Basse-Normandie GCA_000347515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/515/GCF_000347515.1_Assemblage_de_novo/ na na na haploid bacteria 3108278 3106874 44.500000 0 68 92 NCBI RefSeq GCF_000347515.1-RS_2026_01_04 2026-01-04 2997 2857 68 23704179 GCF_000347555.1 PRJNA224116 SAMN02470649 AOMR00000000.1 na 1287887 669 Vibrio harveyi AOD131 strain=AOD131 na latest Scaffold Major Full 2013-03-21 VHAOD131.1 Food Industry Research and Development Institute GCA_000347555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/555/GCF_000347555.1_VHAOD131.1/ na na na haploid bacteria 6125072 6120227 45.000000 0 61 103 NCBI RefSeq GCF_000347555.1-RS_2026_02_15 2026-02-15 5653 5459 105 na GCF_000347595.1 PRJNA224116 SAMN02048828 na na 1171377 47735 Bibersteinia trehalosi USDA-ARS-USMARC-192 strain=USDA-ARS-USMARC-192 na latest Complete Genome Major Full 2013-03-20 ASM34759v1 USDA-ARS-USMARC GCA_000347595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/595/GCF_000347595.1_ASM34759v1/ na na na haploid bacteria 2407846 2407846 41.000000 1 1 1 NCBI RefSeq GCF_000347595.1-RS_2025_07_15 2025-07-15 2261 2150 80 na GCF_000347615.1 PRJNA224116 SAMN02604344 na na 1312904 446 Legionella pneumophila subsp. pneumophila LPE509 strain=LPE509 na latest Complete Genome Major Full 2013-03-20 ASM34761v1 Zhongshan Hospital, Fudan University; Department of Biological Sciences Purdue University GCA_000347615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/615/GCF_000347615.1_ASM34761v1/ na na na haploid bacteria 3507714 3507714 38.500000 2 2 2 NCBI RefSeq GCF_000347615.1-RS_2025_12_13 2025-12-13 3162 3083 56 23792742 GCF_000347635.1 PRJNA224116 SAMN02603050 na na 1129794 326544 Paraglaciecola psychrophila 170 strain=170 na latest Complete Genome Major Full 2013-03-20 ASM34763v1 CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences GCA_000347635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/635/GCF_000347635.1_ASM34763v1/ na assembly from type material na haploid bacteria 5413691 5413691 40.500000 1 1 1 NCBI RefSeq GCF_000347635.1-RS_2025_12_23 2025-12-23 4972 4554 81 23640379 GCF_000347675.2 PRJNA224116 SAMN02603295 na na 745310 745310 Sphingomonas sp. MM-1 strain=MM-1 na latest Complete Genome Major Full 2013-04-16 ASM34767v2 Graduate School of Life Sciences, Tohoku University GCA_000347675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/675/GCF_000347675.2_ASM34767v2/ na na na haploid bacteria 4633613 4633613 66.500000 6 6 6 NCBI RefSeq GCF_000347675.2-RS_2025_08_25 2025-08-25 4495 4367 57 23682148 GCF_000347695.1 PRJNA224116 SAMN02603226 na na 1254439 33905 Bifidobacterium thermophilum RBL67 strain=RBL67 na latest Complete Genome Major Full 2013-03-20 ASM34769v1 ETH Zurich GCA_000347695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/695/GCF_000347695.1_ASM34769v1/ na na na haploid bacteria 2291643 2291643 60.000000 1 1 1 NCBI RefSeq GCF_000347695.1-RS_2025_12_16 2025-12-16 1749 1643 62 23640377 GCF_000347775.1 PRJNA224116 SAMN02471869 APAT00000000.1 reference genome 1288826 523742 Marinobacter santoriniensis NKSG1 strain=NKSG1 na latest Contig Major Full 2013-03-21 ASM34777v1 University of Manchester GCA_000347775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/775/GCF_000347775.1_ASM34777v1/ na assembly from type material na haploid bacteria 4033468 4033468 58.500000 0 41 41 NCBI RefSeq GCF_000347775.1-RS_2025_11_28 2025-11-28 3743 3668 54 23661489 GCF_000347795.1 PRJNA224116 SAMN02469959 AOBX00000000.1 na 1257037 1309 Streptococcus mutans 5DC8 strain=5DC8 na latest Contig Major Full 2013-03-21 5dc8_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/795/GCF_000347795.1_5dc8_V1/ na na na haploid bacteria 2010949 2010949 37.000000 0 9 9 NCBI RefSeq GCF_000347795.1-RS_2026_01_23 2026-01-23 1996 1838 84 23805886 GCF_000347815.1 PRJNA224116 SAMN02469962 AOBY00000000.1 na 1257038 1309 Streptococcus mutans KK21 strain=KK21 na latest Contig Major Full 2013-03-21 KK21_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/815/GCF_000347815.1_KK21_V1/ na na na haploid bacteria 2034595 2034595 37.000000 0 2 2 NCBI RefSeq GCF_000347815.1-RS_2025_12_07 2025-12-07 2021 1868 86 23805886 GCF_000347835.1 PRJNA224116 SAMN02469955 AOBZ00000000.1 na 1257039 1309 Streptococcus mutans KK23 strain=KK23 na latest Scaffold Major Full 2013-03-21 KK23_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/835/GCF_000347835.1_KK23_V1/ na na na haploid bacteria 1976204 1976064 36.500000 0 38 47 NCBI RefSeq GCF_000347835.1-RS_2025_12_22 2025-12-22 1947 1846 28 23805886 GCF_000347855.1 PRJNA224116 SAMN02469957 AOCA00000000.1 na 1257040 1309 Streptococcus mutans AC4446 strain=AC4446 na latest Contig Major Full 2013-03-21 AC4446_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/855/GCF_000347855.1_AC4446_V1/ na na na haploid bacteria 2003697 2003697 37.000000 0 42 42 NCBI RefSeq GCF_000347855.1-RS_2026_01_23 2026-01-23 2010 1855 84 23805886 GCF_000347875.1 PRJNA224116 SAMN02469958 AOCB00000000.1 na 1257041 1309 Streptococcus mutans ATCC 25175 strain=ATCC 25175 na latest Contig Major Full 2013-03-21 ATCC25175_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/875/GCF_000347875.1_ATCC25175_V1/ na assembly from type material na haploid bacteria 1999673 1999673 37.000000 0 10 10 NCBI RefSeq GCF_000347875.1-RS_2026_02_02 2026-02-02 1991 1846 83 23805886 GCF_000347895.1 PRJNA224116 SAMN02469960 AOCC00000000.1 na 1257042 1309 Streptococcus mutans NCTC 11060 strain=NCTC 11060 na latest Contig Major Full 2013-03-21 NCTC11060_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/895/GCF_000347895.1_NCTC11060_V1/ na na na haploid bacteria 2021313 2021313 37.000000 0 36 36 NCBI RefSeq GCF_000347895.1-RS_2026_01_23 2026-01-23 1997 1861 71 23805886 GCF_000347915.1 PRJNA224116 SAMN02469961 AOCD00000000.1 na 699248 1341 Streptococcus ratti FA-1 = DSM 20564 strain=DSM 20564 na latest Contig Major Full 2013-03-21 DSM20564_V1 Institute of Bioprocess and Biosystems Engineering GCA_000347915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/915/GCF_000347915.1_DSM20564_V1/ na assembly from type material na haploid bacteria 2037184 2037184 41.000000 0 182 182 NCBI RefSeq GCF_000347915.1-RS_2026_02_02 2026-02-02 2014 1916 38 23805886 GCF_000347955.2 PRJNA224116 SAMN01804522 ANGC00000000.2 na 1240349 1830 Rhodococcus ruber Chol-4 strain=Chol-4 na latest Scaffold Major Full 2016-02-11 ASM34795v2 UCM GCA_000347955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/955/GCF_000347955.2_ASM34795v2/ na na na haploid bacteria 5464707 5463688 70.500000 0 44 50 NCBI RefSeq GCF_000347955.2-RS_2026_01_25 2026-01-25 5084 4977 60 23682139 GCF_000347975.1 PRJNA224116 SAMN02470546 AOGU00000000.1 na 1247713 28450 Burkholderia pseudomallei MSHR1043 strain=MSHR1043 na latest Contig Major Full 2013-03-21 MSHR1043 Menzies School of Health Research GCA_000347975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/975/GCF_000347975.1_MSHR1043/ na na na haploid bacteria 7221181 7221181 68.000000 0 44 44 NCBI RefSeq GCF_000347975.1-RS_2026_01_04 2026-01-04 6489 6250 61 23860767 GCF_000347995.1 PRJNA224116 SAMN02256518 APLA00000000.1 na 768491 768491 Serratia sp. S4 strain=S4 na latest Scaffold Major Full 2013-03-22 ASM34799v1 DOE Joint Genome Institute GCA_000347995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/995/GCF_000347995.1_ASM34799v1/ na na na haploid bacteria 5454741 5454541 55.000000 0 2 4 NCBI RefSeq GCF_000347995.1-RS_2024_08_22 2024-08-22 5077 4932 114 na GCF_000348015.1 PRJNA224116 SAMN01919772 APGN00000000.1 na 1218594 28183 Leptospira santarosai str. CBC1531 strain=CBC1531 na latest Contig Major Full 2013-03-21 gls454162v01 J. Craig Venter Institute GCA_000348015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/015/GCF_000348015.1_gls454162v01/ na na na haploid bacteria 3835045 3835045 42.000000 0 285 285 NCBI RefSeq GCF_000348015.1-RS_2026_01_30 2026-01-30 3587 3400 42 na GCF_000348045.2 PRJNA224116 SAMN00989305 APFJ00000000.1 na 1095661 666 Vibrio cholerae O1 str. 116059 strain=116059 na latest Scaffold Minor Full 2013-03-25 ASM34804v2 Institute for Genome Sciences GCA_000348045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/045/GCF_000348045.2_ASM34804v2/ na na na haploid bacteria 4017055 4015476 47.500000 0 92 122 NCBI RefSeq GCF_000348045.2-RS_2026_01_21 2026-01-21 3713 3552 97 na GCF_000348065.2 PRJNA224116 SAMN00989311 APFK00000000.1 na 1095662 666 Vibrio cholerae O1 str. 116063 strain=116063 na latest Scaffold Minor Full 2013-03-25 ASM34806v2 Institute for Genome Sciences GCA_000348065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/065/GCF_000348065.2_ASM34806v2/ na na na haploid bacteria 3970379 3968935 47.500000 0 144 164 NCBI RefSeq GCF_000348065.2-RS_2026_01_21 2026-01-21 3683 3475 102 na GCF_000348085.2 PRJNA224116 SAMN00989303 APFL00000000.1 na 1095659 650003 Vibrio paracholerae 87395 strain=87395 na latest Scaffold Minor Full 2013-03-25 ASM34808v2 Institute for Genome Sciences GCA_000348085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/085/GCF_000348085.2_ASM34808v2/ na na na haploid bacteria 3858111 3856617 47.500000 0 180 211 NCBI RefSeq GCF_000348085.2-RS_2026_01_21 2026-01-21 3605 3382 107 na GCF_000348105.2 PRJNA224116 SAMN00989304 APFM00000000.1 na 1095660 666 Vibrio cholerae O1 str. 95412 strain=95412 na latest Scaffold Minor Full 2013-03-25 ASM34810v2 Institute for Genome Sciences GCA_000348105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/105/GCF_000348105.2_ASM34810v2/ na na na haploid bacteria 4030154 4028316 47.500000 0 103 131 NCBI RefSeq GCF_000348105.2-RS_2026_01_21 2026-01-21 3757 3589 93 26980836 GCF_000348125.2 PRJNA224116 SAMN00989285 APFN00000000.1 na 1095645 666 Vibrio cholerae O1 str. AG-7404 strain=AG-7404 na latest Scaffold Minor Full 2013-03-25 ASM34812v2 Institute for Genome Sciences GCA_000348125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/125/GCF_000348125.2_ASM34812v2/ na na na haploid bacteria 3915123 3914285 47.500000 0 95 115 NCBI RefSeq GCF_000348125.2-RS_2026_01_21 2026-01-21 3603 3448 99 na GCF_000348145.2 PRJNA224116 SAMN00989299 APFO00000000.1 na 1095644 666 Vibrio cholerae O1 str. AG-8040 strain=AG-8040 na latest Scaffold Minor Full 2013-03-25 ASM34814v2 Institute for Genome Sciences GCA_000348145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/145/GCF_000348145.2_ASM34814v2/ na na na haploid bacteria 3977194 3976154 47.500000 0 103 121 NCBI RefSeq GCF_000348145.2-RS_2026_01_21 2026-01-21 3652 3498 99 na GCF_000348165.2 PRJNA224116 SAMN00989307 APFP00000000.1 na 1095651 666 Vibrio cholerae O1 str. EC-0009 strain=EC-0009 na latest Scaffold Minor Full 2013-03-25 ASM34816v2 Institute for Genome Sciences GCA_000348165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/165/GCF_000348165.2_ASM34816v2/ na na na haploid bacteria 4028271 4027308 47.500000 0 87 105 NCBI RefSeq GCF_000348165.2-RS_2026_05_01 2026-05-01 3691 3555 89 na GCF_000348185.2 PRJNA224116 SAMN00991870 APFQ00000000.1 na 1095652 666 Vibrio cholerae O1 str. EC-0012 strain=EC-0012 na latest Scaffold Minor Full 2013-03-25 ASM34818v2 Institute for Genome Sciences GCA_000348185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/185/GCF_000348185.2_ASM34818v2/ na na na haploid bacteria 4031923 4030383 47.500000 0 96 117 NCBI RefSeq GCF_000348185.2-RS_2026_06_02 2026-06-02 3711 3556 102 na GCF_000348205.2 PRJNA224116 SAMN00989314 APFR00000000.1 na 1095653 666 Vibrio cholerae O1 str. EC-0027 strain=EC-0027 na latest Scaffold Minor Full 2013-03-25 ASM34820v2 Institute for Genome Sciences GCA_000348205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/205/GCF_000348205.2_ASM34820v2/ na na na haploid bacteria 4027674 4027198 47.500000 0 94 115 NCBI RefSeq GCF_000348205.2-RS_2026_05_03 2026-05-03 3695 3556 90 na GCF_000348225.2 PRJNA224116 SAMN00989301 APFS00000000.1 na 1095654 666 Vibrio cholerae O1 str. EC-0051 strain=EC-0051 na latest Scaffold Minor Full 2013-03-25 ASM34822v2 Institute for Genome Sciences GCA_000348225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/225/GCF_000348225.2_ASM34822v2/ na na na haploid bacteria 4069374 4068435 47.500000 0 99 126 NCBI RefSeq GCF_000348225.2-RS_2026_01_21 2026-01-21 3783 3630 96 na GCF_000348245.2 PRJNA224116 SAMN00989315 APFT00000000.1 na 1095640 666 Vibrio cholerae O1 str. EDC-020 strain=EDC-020 na latest Scaffold Minor Full 2013-03-25 ASM34824v2 Institute for Genome Sciences GCA_000348245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/245/GCF_000348245.2_ASM34824v2/ na na na haploid bacteria 4028191 4027275 47.500000 0 85 111 NCBI RefSeq GCF_000348245.2-RS_2026_05_28 2026-05-28 3690 3557 82 na GCF_000348265.2 PRJNA224116 SAMN00989313 APFU00000000.1 na 1095641 666 Vibrio cholerae O1 str. EDC-022 strain=EDC-022 na latest Scaffold Minor Full 2013-03-25 ASM34826v2 Institute for Genome Sciences GCA_000348265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/265/GCF_000348265.2_ASM34826v2/ na na na haploid bacteria 4050458 4049405 47.500000 0 106 131 NCBI RefSeq GCF_000348265.2-RS_2026_06_16 2026-06-16 3739 3588 92 na GCF_000348285.2 PRJNA224116 SAMN00989284 APFV00000000.1 na 1095646 666 Vibrio cholerae O1 str. EM-1536 strain=EM-1536 na latest Scaffold Minor Full 2013-03-25 ASM34828v2 Institute for Genome Sciences GCA_000348285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/285/GCF_000348285.2_ASM34828v2/ na na na haploid bacteria 4053577 4052119 47.500000 0 100 122 NCBI RefSeq GCF_000348285.2-RS_2026_06_04 2026-06-04 3741 3589 96 na GCF_000348305.2 PRJNA224116 SAMN00989302 APFW00000000.1 na 1095647 666 Vibrio cholerae O1 str. EM-1546 strain=EM-1546 na latest Scaffold Minor Full 2013-03-25 ASM34830v2 Institute for Genome Sciences GCA_000348305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/305/GCF_000348305.2_ASM34830v2/ na na na haploid bacteria 4061605 4060561 47.500000 0 90 112 NCBI RefSeq GCF_000348305.2-RS_2026_05_01 2026-05-01 3746 3606 92 na GCF_000348325.2 PRJNA224116 SAMN00989300 APFX00000000.1 na 1095648 666 Vibrio cholerae O1 str. EM-1626 strain=EM-1626 na latest Scaffold Minor Full 2013-03-25 ASM34832v2 Institute for Genome Sciences GCA_000348325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/325/GCF_000348325.2_ASM34832v2/ na na na haploid bacteria 4052965 4051818 47.500000 0 93 115 NCBI RefSeq GCF_000348325.2-RS_2026_06_04 2026-06-04 3737 3586 95 na GCF_000348345.2 PRJNA224116 SAMN00991861 APFY00000000.1 na 1095649 666 Vibrio cholerae O1 str. EM-1676A strain=EM-1676A na latest Scaffold Minor Full 2013-03-25 ASM34834v2 Institute for Genome Sciences GCA_000348345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/345/GCF_000348345.2_ASM34834v2/ na na na haploid bacteria 4007225 4005629 47.500000 0 85 110 NCBI RefSeq GCF_000348345.2-RS_2026_01_21 2026-01-21 3703 3551 100 na GCF_000348365.1 PRJNA224116 SAMN00991869 APFZ00000000.1 na 1095650 666 Vibrio cholerae O1 str. EM-1727 strain=EM-1727 na latest Scaffold Major Full 2013-03-25 ASM34836v1 Institute for Genome Sciences GCA_000348365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/365/GCF_000348365.1_ASM34836v1/ na na na haploid bacteria 4067194 4066398 47.500000 0 109 126 NCBI RefSeq GCF_000348365.1-RS_2026_01_11 2026-01-11 3785 3629 96 na GCF_000348385.2 PRJNA224116 SAMN00989277 APGA00000000.1 na 1095655 666 Vibrio cholerae O1 str. NHCC-004A strain=NHCC-004A na latest Scaffold Minor Full 2013-03-25 ASM34838v2 Institute for Genome Sciences GCA_000348385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/385/GCF_000348385.2_ASM34838v2/ na na na haploid bacteria 4031643 4030779 47.500000 0 86 108 NCBI RefSeq GCF_000348385.2-RS_2026_05_30 2026-05-30 3710 3563 96 na GCF_000348405.2 PRJNA224116 SAMN00989308 APGB00000000.1 na 1095656 666 Vibrio cholerae O1 str. NHCC-006C strain=NHCC-006C na latest Scaffold Minor Full 2013-03-25 ASM34840v2 Institute for Genome Sciences GCA_000348405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/405/GCF_000348405.2_ASM34840v2/ na na na haploid bacteria 4028239 4026625 47.500000 0 86 114 NCBI RefSeq GCF_000348405.2-RS_2026_05_03 2026-05-03 3695 3558 88 na GCF_000348425.2 PRJNA224116 SAMN00989276 APGC00000000.1 na 1095657 666 Vibrio cholerae O1 str. NHCC-008D strain=NHCC-008D na latest Scaffold Minor Full 2013-03-25 ASM34842v2 Institute for Genome Sciences GCA_000348425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/425/GCF_000348425.2_ASM34842v2/ na na na haploid bacteria 3971576 3969607 47.500000 0 81 116 NCBI RefSeq GCF_000348425.2-RS_2026_01_21 2026-01-21 3684 3522 94 na GCF_000348445.2 PRJNA224116 SAMN00989312 APGD00000000.1 na 1095658 666 Vibrio cholerae O1 str. NHCC-010F strain=NHCC-010F na latest Scaffold Minor Full 2013-03-25 ASM34844v2 Institute for Genome Sciences GCA_000348445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/445/GCF_000348445.2_ASM34844v2/ na na na haploid bacteria 4028811 4027814 47.500000 0 92 117 NCBI RefSeq GCF_000348445.2-RS_2026_03_03 2026-03-03 3698 3555 91 na GCF_000348465.2 PRJNA224116 SAMN00989310 APGE00000000.1 na 1095642 666 Vibrio cholerae O1 str. Nep-21106 strain=Nep-21106 na latest Scaffold Minor Full 2013-03-25 ASM34846v2 Institute for Genome Sciences GCA_000348465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/465/GCF_000348465.2_ASM34846v2/ na na na haploid bacteria 4031227 4030070 47.500000 0 80 107 NCBI RefSeq GCF_000348465.2-RS_2026_01_21 2026-01-21 3696 3556 86 na GCF_000348485.2 PRJNA224116 SAMN00989309 APGF00000000.1 na 1095643 666 Vibrio cholerae O1 str. Nep-21113 strain=Nep-21113 na latest Scaffold Minor Full 2013-03-25 ASM34848v2 Institute for Genome Sciences GCA_000348485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/485/GCF_000348485.2_ASM34848v2/ na na na haploid bacteria 4042420 4041687 47.500000 0 100 123 NCBI RefSeq GCF_000348485.2-RS_2026_06_01 2026-06-01 3711 3570 87 na GCF_000348505.2 PRJNA224116 SAMN00989306 APGG00000000.1 na 1095639 666 Vibrio cholerae O1 str. PCS-023 strain=PCS-023 na latest Scaffold Minor Full 2013-03-25 ASM34850v2 Institute for Genome Sciences GCA_000348505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/505/GCF_000348505.2_ASM34850v2/ na na na haploid bacteria 4031594 4030427 47.500000 0 86 114 NCBI RefSeq GCF_000348505.2-RS_2026_06_01 2026-06-01 3712 3560 100 na GCF_000348525.1 PRJNA224116 SAMN02471146 AOGF00000000.1 na 1278971 728 Avibacterium paragallinarum 221 strain=221 na latest Contig Major Full 2013-03-22 Avibacterium paragallinarum 221 The Institute of Animal Husbandry and Veterinary Medicine of Beijing Academy of Agriculture and Forestry Sciences GCA_000348525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/525/GCF_000348525.1_Avibacterium_paragallinarum_221/ na na na haploid bacteria 2668385 2668385 41.000000 0 135 135 NCBI RefSeq GCF_000348525.1-RS_2026_03_28 2026-03-28 2880 2564 72 23704189 GCF_000348545.1 PRJNA224116 SAMN02603298 na na 1262456 1310165 Ralstonia pseudosolanacearum FQY_4 strain=FQY_4 na latest Chromosome Major Full 2013-03-22 ASM34854v1 Guizhou Tobacco Research Institute GCA_000348545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/545/GCF_000348545.1_ASM34854v1/ na na na haploid bacteria 5805250 5804522 67.000000 2 2 3 NCBI RefSeq GCF_000348545.1-RS_2026_01_27 2026-01-27 5216 5017 66 23661471 GCF_000348565.1 PRJNA224116 SAMN02603613 na na 1288122 1263550 Edwardsiella piscicida C07-087 strain=C07-087 na latest Complete Genome Major Full 2013-03-22 ASM34856v1 Mississippi State University GCA_000348565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/565/GCF_000348565.1_ASM34856v1/ na na na haploid bacteria 3857040 3857040 59.500000 1 1 1 NCBI RefSeq GCF_000348565.1-RS_2026_03_30 2026-03-30 3564 3401 125 24265493 GCF_000348585.1 PRJNA224116 SAMN02603863 na na 1304892 53413 Xanthomonas axonopodis Xac29-1 strain=Xac29-1 na latest Complete Genome Major Full 2013-03-22 ASM34858v1 Shanghai Jiao Tong University GCA_000348585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/585/GCF_000348585.1_ASM34858v1/ na na na haploid bacteria 5296525 5296525 64.500000 4 4 4 NCBI RefSeq GCF_000348585.1-RS_2026_05_07 2026-05-07 4625 4239 99 na GCF_000348645.1 PRJNA224116 SAMN02470637 AONT00000000.1 na 1286630 29459 Brucella melitensis M5 strain=M5 na latest Contig Major Full 2013-03-22 MD5v1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000348645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/645/GCF_000348645.1_MD5v1/ na na na haploid bacteria 3289919 3289919 57.500000 0 91 91 NCBI RefSeq GCF_000348645.1-RS_2026_05_01 2026-05-01 3224 2985 55 23967122 GCF_000348685.1 PRJNA224116 SAMN01940371 ANLA00000000.1 reference genome 1137281 1137281 Xanthomarina gelatinilytica strain=AK20 na latest Contig Major Full 2013-03-22 Formosa sp. AK20 Institute of Microbial Technology GCA_000348685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/685/GCF_000348685.1_Formosa_sp._AK20/ na assembly from type material na haploid bacteria 3055484 3055484 35.500000 0 47 47 NCBI RefSeq GCF_000348685.1-RS_2026_03_02 2026-03-02 2828 2770 43 na GCF_000348705.1 PRJNA224116 SAMN02436861 ALJW00000000.1 na 1159083 1313 Streptococcus pneumoniae PCS8235 strain=PCS8235 na latest Chromosome Major Full 2013-03-27 ASM34870v1 Washington University GCA_000348705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/705/GCF_000348705.1_ASM34870v1/ na na na haploid bacteria 2076531 2076431 39.500000 2 2 2 NCBI RefSeq GCF_000348705.1-RS_2026_04_29 2026-04-29 2152 1907 65 na GCF_000348725.1 PRJNA224116 SAMN02604325 na reference genome 1184267 453816 Pseudobdellovibrio exovorus JSS strain=JSS na latest Complete Genome Major Full 2013-03-25 ASM34872v1 Weizmann Institute of Science GCA_000348725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/725/GCF_000348725.1_ASM34872v1/ na assembly from type material na haploid bacteria 2657893 2657893 42.000000 1 1 1 NCBI RefSeq GCF_000348725.1-RS_2026_03_30 2026-03-30 2643 2597 39 23190728 GCF_000348745.1 PRJNA224116 SAMN02604326 na na 349215 349221 Micavibrio aeruginosavorus EPB strain=EPB na latest Complete Genome Major Full 2013-03-25 ASM34874v1 Weizmann Institute of Science GCA_000348745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/745/GCF_000348745.1_ASM34874v1/ na na na haploid bacteria 2458610 2458610 55.000000 1 1 1 NCBI RefSeq GCF_000348745.1-RS_2025_12_10 2025-12-10 2343 2284 45 23190728 GCF_000348765.2 PRJNA224116 SAMN02232032 na na 547146 547146 Hydrogenobaculum sp. SN strain=SN na latest Complete Genome Major Full 2013-03-25 ASM34876v2 US DOE Joint Genome Institute GCA_000348765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/765/GCF_000348765.2_ASM34876v2/ na na na haploid bacteria 1552931 1552931 35.000000 1 1 1 NCBI RefSeq GCF_000348765.2-RS_2024_05_12 2024-05-12 1673 1606 54 23435891 GCF_000348785.1 PRJNA224116 SAMD00060985 na reference genome 1313172 467094 Ilumatobacter coccineus YM16-304 strain=YM16-304 na latest Complete Genome Major Full 2013-03-15 ASM34878v1 National Institute of Technology and Evaluation GCA_000348785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/785/GCF_000348785.1_ASM34878v1/ na assembly from type material na haploid bacteria 4830181 4830181 67.500000 1 1 1 NCBI RefSeq GCF_000348785.1-RS_2025_12_11 2025-12-11 4303 4234 55 23524358 GCF_000348805.1 PRJNA224116 SAMD00061034 na na 1229512 1653831 Blattabacterium cuenoti BPAA strain=BPAA na latest Complete Genome Major Full 2013-03-13 ASM34880v1 University of the Ryukyus GCA_000348805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/805/GCF_000348805.1_ASM34880v1/ na na na haploid bacteria 632490 632490 26.500000 1 1 1 NCBI RefSeq GCF_000348805.1-RS_2026_06_16 2026-06-16 626 582 40 23515978 GCF_000348825.1 PRJNA224116 SAMEA2272485 na na 1260223 813 Chlamydia trachomatis IU888 strain=IU888 na latest Chromosome Major Full 2013-03-15 ASM34882v1 z GCA_000348825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/825/GCF_000348825.1_ASM34882v1/ na na na haploid bacteria 1050524 1050308 41.500000 2 2 3 NCBI RefSeq GCF_000348825.1-RS_2025_03_16 2025-03-16 960 900 46 23378575 GCF_000348845.1 PRJNA224116 SAMEA2272106 na na 1260222 813 Chlamydia trachomatis IU824 strain=IU824 na latest Chromosome Major Full 2013-03-15 ASM34884v1 z GCA_000348845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/845/GCF_000348845.1_ASM34884v1/ na na na haploid bacteria 1050524 1050308 41.500000 2 2 3 NCBI RefSeq GCF_000348845.1-RS_2025_03_16 2025-03-16 961 898 46 23378575 GCF_000348865.1 PRJNA224116 SAMD00061056 na na 1248725 210 Helicobacter pylori OK113 strain=OK113 na latest Complete Genome Major Full 2013-03-11 ASM34886v1 University of Tokyo GCA_000348865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/865/GCF_000348865.1_ASM34886v1/ na na na haploid bacteria 1616617 1616617 38.500000 1 1 1 NCBI RefSeq GCF_000348865.1-RS_2026_02_16 2026-02-16 1570 1426 45 23505045 GCF_000348885.1 PRJNA224116 SAMD00061057 na na 1248726 210 Helicobacter pylori OK310 strain=OK310 na latest Complete Genome Major Full 2013-03-11 ASM34888v1 University of Tokyo GCA_000348885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/885/GCF_000348885.1_ASM34888v1/ na na na haploid bacteria 1595436 1595436 39.000000 2 2 2 NCBI RefSeq GCF_000348885.1-RS_2026_02_11 2026-02-11 1552 1424 45 23505045 GCF_000348905.1 PRJNA224116 SAMN02469443 AOFT00000000.1 reference genome 1235279 394098 Bhargavaea cecembensis DSE10 strain=DSE10 na latest Contig Major Full 2013-03-25 BhCe1 Centre for Cellular and Molecular Biology GCA_000348905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/905/GCF_000348905.1_BhCe1/ na assembly from type material na haploid bacteria 3207463 3207463 55.000000 0 39 39 NCBI RefSeq GCF_000348905.1-RS_2025_12_09 2025-12-09 3228 3126 77 23766406 GCF_000348925.1 PRJNA224116 SAMN02469440 AODQ00000000.1 reference genome 1279009 649507 Cesiribacter andamanensis AMV16 strain=AMV16 na latest Contig Major Full 2013-03-25 CeAn1 Centre for Cellular and Molecular Biology GCA_000348925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/925/GCF_000348925.1_CeAn1/ na assembly from type material na haploid bacteria 4759956 4759956 54.500000 0 237 237 NCBI RefSeq GCF_000348925.1-RS_2025_11_21 2025-11-21 4275 4102 40 23682146 GCF_000348945.1 PRJNA224116 SAMN02469439 AOCK00000000.1 reference genome 1276920 254787 Paeniglutamicibacter gangotriensis Lz1y strain=Lz1y na latest Contig Major Full 2013-03-25 ArGa1 Centre for Cellular and Molecular Biology GCA_000348945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/945/GCF_000348945.1_ArGa1/ na assembly from type material na haploid bacteria 4319900 4319900 63.000000 0 20 20 NCBI RefSeq GCF_000348945.1-RS_2025_12_09 2025-12-09 4038 3908 65 23766407 GCF_000348965.1 PRJNA224116 SAMN02470885 APAV00000000.1 na 1149132 1358 Lactococcus lactis subsp. lactis YF11 strain=YF11 na latest Contig Major Full 2013-03-25 YF11_v1 Tianjin University GCA_000348965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/965/GCF_000348965.1_YF11_v1/ na na na haploid bacteria 2527313 2527313 35.000000 0 71 71 NCBI RefSeq GCF_000348965.1-RS_2026_03_28 2026-03-28 2516 2396 57 23929487 GCF_000348985.1 PRJNA244480 SAMEA2272481 na reference genome 1071383 588726 Huiozyma naganishii CBS 8797 strain=type strain:CBS 8797 na latest Chromosome Major Full 2012-09-05 ASM34898v1 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland GCA_000348985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/348/985/GCF_000348985.1_ASM34898v1/ na assembly from type material na haploid fungi 10845821 10842414 46.000000 13 13 95 Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Annotation submitted by Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland 2025-07-15 5486 5319 167 22123960 GCF_000349005.2 PRJNA245145 SAMN00102820 AFWA00000000.2 reference genome 1069680 263815 Pneumocystis murina B123 strain=B123 na latest Contig Major Full 2015-12-22 Pneumo_murina_B123_V4 Broad Institute GCA_000349005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/005/GCF_000349005.2_Pneumo_murina_B123_V4/ na na na haploid fungi 7501343 7501343 27.000000 0 20 20 Broad Institute Annotation submitted by Broad Institute 2017-08-29 3675 3623 52 na GCF_000349205.1 PRJNA224116 SAMN02470674 APHR00000000.1 reference genome 1286106 999151 Methylophaga lonarensis MPL strain=MPL na latest Contig Major Full 2013-03-26 MPLversion1 National Centre for Cell Science GCA_000349205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/205/GCF_000349205.1_MPLversion1/ na assembly from type material na haploid bacteria 2637625 2637625 49.500000 0 116 116 NCBI RefSeq GCF_000349205.1-RS_2025_12_09 2025-12-09 2678 2562 59 23661481 GCF_000349225.1 PRJNA224116 SAMN02603165 na na 1137651 346 Xanthomonas citri subsp. citri Aw12879 strain=Aw12879 na latest Complete Genome Major Full 2013-03-26 ASM34922v1 CREC, University of Florida GCA_000349225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/225/GCF_000349225.1_ASM34922v1/ na na na haploid bacteria 5398685 5398685 64.500000 3 3 3 NCBI RefSeq GCF_000349225.1-RS_2026_05_07 2026-05-07 4698 4390 98 23682143 GCF_000349265.2 PRJNA224116 SAMN02471470 AOGQ00000000.1 na 1276652 573 Klebsiella pneumoniae ATCC BAA-1705 strain=ATCC BAA-1705 na latest Contig Minor Full 2013-03-26 KPBAA1705_01152013 University of North Carolina at Chapel Hill GCA_000349265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/265/GCF_000349265.2_KPBAA1705_01152013/ na na na haploid bacteria 5657550 5657550 57.000000 0 168 168 NCBI RefSeq GCF_000349265.2-RS_2025_01_05 2025-01-05 5770 5532 97 23723407 GCF_000349285.2 PRJNA224116 SAMN02471909 AOCV00000000.1 na 1263871 573 Klebsiella pneumoniae ATCC BAA-2146 strain=ATCC BAA-2146 na latest Contig Minor Full 2013-03-26 G000_12282012 University of North Carolina at Chapel Hill GCA_000349285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/285/GCF_000349285.2_G000_12282012/ na na na haploid bacteria 5674981 5674981 57.000000 0 108 108 NCBI RefSeq GCF_000349285.2-RS_2025_01_05 2025-01-05 5729 5511 93 23723407 GCF_000349305.1 PRJNA264005 SAMEA2271934 CANK00000000.1 reference genome 1230383 76777 Malassezia sympodialis ATCC 42132 strain=ATCC 42132 na latest Scaffold Major Full 2013-03-18 ASM34930v2 SciLifeLab GCA_000349305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/305/GCF_000349305.1_ASM34930v2/ na na na haploid fungi 7669689 7654697 59.000000 0 65 88 SciLifeLab Annotation submitted by SciLifeLab 2024-01-02 3517 3318 0 na GCF_000349325.1 PRJNA224116 SAMEA2272568 na reference genome 1214101 348043 Streptomyces davaonensis JCM 4913 strain=JCM 4913 na latest Chromosome Major Full 2012-10-09 ASM34932v1 CeBiTec GCA_000349325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/325/GCF_000349325.1_ASM34932v1/ na assembly from type material na haploid bacteria 9555950 9554503 70.500000 2 2 4 NCBI RefSeq GCF_000349325.1-RS_2025_12_16 2025-12-16 8695 8420 91 23043000 GCF_000349405.1 PRJNA224116 SAMN01178406 AOTX00000000.1 na 992058 210 Helicobacter pylori Hp H-1 strain=Hp H-1 na latest Contig Major Full 2013-03-27 ASM34940v1 Institute for Genome Sciences GCA_000349405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/405/GCF_000349405.1_ASM34940v1/ na na na haploid bacteria 1682934 1682934 39.000000 0 54 54 NCBI RefSeq GCF_000349405.1-RS_2026_01_11 2026-01-11 1628 1502 46 na GCF_000349465.1 PRJNA224116 SAMN01178405 AOTV00000000.1 na 1200324 210 Helicobacter pylori UMB_G1 strain=MALT na latest Contig Major Full 2013-03-27 ASM34946v1 IGS GCA_000349465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/465/GCF_000349465.1_ASM34946v1/ na na na haploid bacteria 1571801 1571801 39.000000 0 5 5 NCBI RefSeq GCF_000349465.1-RS_2026_01_27 2026-01-27 1502 1392 47 na GCF_000349485.1 PRJNA224116 SAMN01178404 AOTU00000000.1 na 1200325 210 Helicobacter pylori CCHI 33 strain=CCHI 33 na latest Contig Major Full 2013-03-27 ASM34948v1 IGS GCA_000349485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/485/GCF_000349485.1_ASM34948v1/ na na na haploid bacteria 1659327 1659327 39.000000 0 11 11 NCBI RefSeq GCF_000349485.1-RS_2026_01_11 2026-01-11 1601 1469 43 na GCF_000349505.1 PRJNA224116 SAMN01178408 AOTT00000000.1 na 992015 210 Helicobacter pylori CPY1662 strain=CPY1662 na latest Contig Major Full 2013-03-27 ASM34950v1 Institute for Genome Sciences GCA_000349505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/505/GCF_000349505.1_ASM34950v1/ na na na haploid bacteria 1595824 1595824 39.000000 0 9 9 NCBI RefSeq GCF_000349505.1-RS_2025_08_25 2025-08-25 1546 1395 47 na GCF_000349545.1 PRJNA224116 SAMN02471295 APJM00000000.1 na 1292023 1292023 Leucobacter sp. UCD-THU strain=UCD-THU na latest Scaffold Major Full 2013-04-09 Leucobacter sp. str. UCD-THU UC Davis GCA_000349545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/545/GCF_000349545.1_Leucobacter_sp._str._UCD-THU/ na na na haploid bacteria 3317267 3316448 70.500000 0 11 30 NCBI RefSeq GCF_000349545.1-RS_2025_02_25 2025-02-25 3046 2954 53 23792744 GCF_000349565.1 PRJNA224116 SAMN02471293 APJN00000000.1 na 1292022 2035 Curtobacterium flaccumfaciens UCD-AKU strain=UCD-AKU na latest Scaffold Major Full 2013-04-09 Curtobacterium flaccumfaciens UCD-AKU UC Davis GCA_000349565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/565/GCF_000349565.1_Curtobacterium_flaccumfaciens_UCD-AKU/ na na na haploid bacteria 3705324 3692614 71.000000 0 37 130 NCBI RefSeq GCF_000349565.1-RS_2025_02_03 2025-02-03 3565 3475 53 23682147 GCF_000349585.1 PRJNA224116 SAMN02471298 AOSR00000000.1 na 1292020 1292020 Dietzia sp. UCD-THP strain=UCD-THP na latest Scaffold Major Full 2013-04-09 Dietzia sp. UCD-THP UC Davis GCA_000349585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/585/GCF_000349585.1_Dietzia_sp._UCD-THP/ na na na haploid bacteria 3927728 3915613 69.500000 0 138 219 NCBI RefSeq GCF_000349585.1-RS_2024_08_22 2024-08-22 3795 3657 53 23661480 GCF_000349605.1 PRJNA224116 SAMN02471294 AOSQ00000000.1 na 1292021 1292021 Kocuria sp. UCD-OTCP strain=UCD-OTCP na latest Scaffold Major Full 2013-04-09 Kocuria sp. UCD-OTCP UC Davis GCA_000349605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/605/GCF_000349605.1_Kocuria_sp._UCD-OTCP/ na na na haploid bacteria 3791485 3791429 72.500000 0 68 71 NCBI RefSeq GCF_000349605.1-RS_2025_08_18 2025-08-18 3498 3372 55 23661474 GCF_000349725.1 PRJNA224116 SAMN02470552 APCP00000000.1 na 1242253 449659 Ligilactobacillus pobuzihii E100301 = KCTC 13174 strain=E100301 na latest Scaffold Major Full 2013-04-09 ASM34972v1 Ming Chuan University GCA_000349725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/725/GCF_000349725.1_ASM34972v1/ na assembly from type material na haploid bacteria 2351656 2346370 37.500000 0 54 113 NCBI RefSeq GCF_000349725.1-RS_2025_09_10 2025-09-10 2251 2123 69 23661478 GCF_000349765.2 PRJNA224116 SAMN02048829 na na 1249531 75985 Mannheimia haemolytica USDA-ARS-USMARC-183 strain=USDA-ARS-USMARC-183 na latest Complete Genome Major Full 2017-08-30 ASM34976v2 USDA-ARS-USMARC GCA_000349765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/765/GCF_000349765.2_ASM34976v2/ na na na haploid bacteria 2657957 2657957 41.000000 1 1 1 NCBI RefSeq GCF_000349765.2-RS_2026_03_14 2026-03-14 2724 2557 89 23682137 GCF_000349785.2 PRJNA224116 SAMN02048830 na na 1249526 75985 Mannheimia haemolytica USDA-ARS-USMARC-185 strain=USDA-ARS-USMARC-185 na latest Complete Genome Major Full 2017-08-30 ASM34978v2 USDA-ARS-USMARC GCA_000349785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/785/GCF_000349785.2_ASM34978v2/ na na na haploid bacteria 2544094 2544094 41.000000 1 1 1 NCBI RefSeq GCF_000349785.2-RS_2026_03_14 2026-03-14 2522 2354 85 23682137 GCF_000349795.1 PRJNA224116 SAMN02603719 na na 1302650 1423 Bacillus subtilis subsp. subtilis str. BAB-1 strain=BAB-1 na latest Complete Genome Major Full 2013-03-29 ASM34979v1 Plant Protection Institute, Hebei Academy of Agricultural and Forestry Sciences GCA_000349795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/795/GCF_000349795.1_ASM34979v1/ na na na haploid bacteria 4021944 4021944 44.000000 1 1 1 NCBI RefSeq GCF_000349795.1-RS_2025_06_27 2025-06-27 4143 3898 121 25103757 GCF_000349845.1 PRJNA224116 SAMN02603735 na na 1294143 1294143 Pseudomonas sp. ATCC 13867 strain=ATCC 13867 na latest Complete Genome Major Full 2013-03-29 ASM34984v1 Pusan National University GCA_000349845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/845/GCF_000349845.1_ASM34984v1/ na na na haploid bacteria 5696307 5696307 65.000000 1 1 1 NCBI RefSeq GCF_000349845.1-RS_2025_08_25 2025-08-25 5188 5029 83 23723394 GCF_000349885.2 PRJNA224116 SAMN02604195 na na 1121335 1510 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 strain=DSM 8532 na latest Complete Genome Major Full 2013-08-30 ASM34988v2 University of Manitoba GCA_000349885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/885/GCF_000349885.2_ASM34988v2/ na assembly from type material na haploid bacteria 2970010 2970010 42.500000 1 1 1 NCBI RefSeq GCF_000349885.2-RS_2026_04_07 2026-04-07 2628 2524 61 24998381 GCF_000349925.2 PRJNA224116 SAMD00061013 na na 1207470 1314 Streptococcus pyogenes M1 476 strain=M1 476 na latest Complete Genome Major Full 2013-07-02 ASM34992v2 National Center for Global Health and Medicine GCA_000349925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/925/GCF_000349925.2_ASM34992v2/ na na na haploid bacteria 1831128 1831128 38.500000 1 1 1 NCBI RefSeq GCF_000349925.2-RS_2026_02_16 2026-02-16 1838 1701 76 22965090 GCF_000349945.1 PRJNA224116 SAMD00061029 na na 748247 748247 Azoarcus sp. KH32C strain=KH32C na latest Complete Genome Major Full 2011-11-30 ASM34994v1 Laboratory of Soil Sciences, Department of Applied Biological Chemistry, Graducate School of Agricultural and Life Sciences, The University of Tokyo GCA_000349945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/945/GCF_000349945.1_ASM34994v1/ na na na haploid bacteria 5818755 5818755 65.000000 2 2 2 NCBI RefSeq GCF_000349945.1-RS_2024_08_13 2024-08-13 5274 5158 82 na GCF_000349975.1 PRJNA224116 SAMD00061010 na na 537971 213 Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 strain=ATCC BAA-847 na latest Complete Genome Major Full 2012-07-18 ASM34997v1 National Center for Global Health and Medicine GCA_000349975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/349/975/GCF_000349975.1_ASM34997v1/ na assembly from type material na haploid bacteria 2240130 2240130 38.500000 1 1 1 NCBI RefSeq GCF_000349975.1-RS_2026_02_11 2026-02-11 2429 2332 49 23012276 GCF_000350005.1 PRJNA224116 SAMN02472038 AHAV00000000.1 na 1090928 562 Escherichia coli O104:H4 str. E112/10 strain=E112/10 na latest Contig Major Full 2013-04-01 E112_10NrN01 Uppsala University GCA_000350005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/005/GCF_000350005.1_E112_10NrN01/ na na na haploid bacteria 5330283 5330283 50.500000 0 218 218 NCBI RefSeq GCF_000350005.1-RS_2025_05_16 2025-05-16 5397 4986 103 23675451 GCF_000350025.2 PRJNA224116 SAMN02472037 AHAX00000000.1 na 1090930 562 Escherichia coli ONT:H33 str. C48/93 strain=C48/93 na latest Contig Minor Full 2013-04-01 C48_93_IrSpV01 Uppsala University GCA_000350025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/025/GCF_000350025.2_C48_93_IrSpV01/ na na na haploid bacteria 4950844 4950844 50.500000 0 101 101 NCBI RefSeq GCF_000350025.2-RS_2025_05_22 2025-05-22 4915 4520 105 23675451 GCF_000350045.2 PRJNA224116 SAMN00727765 AHAW00000000.1 na 1090929 562 Escherichia coli O127:H27 str. C43/90 strain=C43/90 na latest Contig Minor Full 2013-04-01 C43_90_IrSpV01 Uppsala University GCA_000350045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/045/GCF_000350045.2_C43_90_IrSpV01/ na na na haploid bacteria 5101065 5101065 50.500000 0 119 119 NCBI RefSeq GCF_000350045.2-RS_2025_05_23 2025-05-23 5095 4722 107 23675451 GCF_000350085.1 PRJNA224116 SAMEA2272539 CAUM00000000.1 reference genome 1297569 489722 Mesorhizobium metallidurans STM 2683 strain=STM 2683 na latest Contig Major Full 2013-03-28 ASM35008v1 Genoscope CEA GCA_000350085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/085/GCF_000350085.1_ASM35008v1/ na assembly from type material na haploid bacteria 6232533 6232533 62.500000 0 191 191 NCBI RefSeq GCF_000350085.1-RS_2026_04_23 2026-04-23 6163 5853 55 na GCF_000350105.1 PRJNA224116 SAMEA2272692 CAIY00000000.1 reference genome 1165094 1164990 Richelia intracellularis HH01 strain=HH01 na latest Contig Major Full 2013-03-27 ASM35010v1 UC-Santa Cruz GCA_000350105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/105/GCF_000350105.1_ASM35010v1/ na na na haploid bacteria 3243759 3243759 33.500000 0 90 90 NCBI RefSeq GCF_000350105.1-RS_2025_12_11 2025-12-11 2093 1943 46 na GCF_000350125.1 PRJNA224116 SAMEA2272302 CAIS00000000.1 na 1165095 1164990 Richelia intracellularis HM01 strain=HM01 na latest Contig Major Full 2013-03-27 ASM35012v1 UC-Santa Cruz GCA_000350125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/125/GCF_000350125.1_ASM35012v1/ na na na haploid bacteria 2212909 2212909 34.000000 0 941 941 NCBI RefSeq GCF_000350125.1-RS_2026_02_08 2026-02-08 1821 1407 32 na GCF_000350145.1 PRJNA224116 SAMD00036665 BAOL00000000.1 reference genome 1313171 467093 Ilumatobacter nonamiensis YM16-303 strain=YM16-303 na latest Contig Major Full 2013-03-27 ASM35014v1 Kitasato University GCA_000350145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/145/GCF_000350145.1_ASM35014v1/ na assembly from type material na haploid bacteria 4282232 4282232 67.000000 0 399 399 NCBI RefSeq GCF_000350145.1-RS_2025_09_02 2025-09-02 4151 4029 47 23524358 GCF_000350165.1 PRJNA224116 SAMEA2272400 CAUI00000000.1 reference genome 1293054 43595 Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 strain=type strain:DSM 6643 na latest Contig Major Full 2013-03-13 ASM35016v1 TUT GCA_000350165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/165/GCF_000350165.1_ASM35016v1/ na assembly from type material na haploid bacteria 2873865 2873865 32.500000 0 24 24 NCBI RefSeq GCF_000350165.1-RS_2025_12_10 2025-12-10 2738 2626 80 23640197 GCF_000350205.1 PRJNA224116 SAMD00061050 na na 652616 1773 Mycobacterium tuberculosis str. Erdman = ATCC 35801 strain=Erdman na latest Complete Genome Major Full 2012-03-01 ASM35020v1 National Center for Global Health and Medicine GCA_000350205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/205/GCF_000350205.1_ASM35020v1/ na na na haploid bacteria 4392353 4392353 65.500000 1 1 1 NCBI RefSeq GCF_000350205.1-RS_2025_06_29 2025-06-29 4154 3891 51 22535945 GCF_000350385.1 PRJNA224116 SAMN02472060 AOFG00000000.1 na 1280936 309868 Candidatus Liberibacter americanus PW_SP strain=PW_SP na latest Contig Major Full 2013-04-02 Velvet USDA-ARS GCA_000350385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/385/GCF_000350385.1_Velvet/ na na na haploid bacteria 1176071 1176071 31.000000 0 22 22 NCBI RefSeq GCF_000350385.1-RS_2026_03_30 2026-03-30 1021 947 57 23704186 GCF_000350425.2 PRJNA224116 SAMN02472075 APFH00000000.1 na 1283278 1280 Staphylococcus aureus KLT6 strain=KLT6 na latest Contig Minor Full 2013-04-02 KLT6 ohnosequences! research group, Era7 Bioinformatics GCA_000350425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/425/GCF_000350425.2_KLT6/ na na na haploid bacteria 2700176 2700176 33.000000 0 29 29 NCBI RefSeq GCF_000350425.2-RS_2025_04_18 2025-04-18 2663 2492 36 23704175 GCF_000350465.1 PRJNA224116 SAMN02470053 AOSM00000000.1 na 1288492 53345 Enterococcus durans IPLA 655 strain=IPLA 655 na latest Contig Major Full 2013-04-03 Edurans6552.0 Instituto de Productos Lacteos de Asturias (IPLA-CSIC) GCA_000350465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/465/GCF_000350465.1_Edurans6552.0/ na na na haploid bacteria 3059052 3059052 37.500000 0 145 145 NCBI RefSeq GCF_000350465.1-RS_2026_03_28 2026-03-28 3011 2769 75 23682153 GCF_000350485.1 PRJNA224116 SAMN02471873 AORV00000000.1 na 1195236 29355 Ruminiclostridium cellobioparum subsp. termitidis CT1112 strain=CT1112 na latest Contig Major Full 2013-04-03 C.termitidis 454 shotgun Newbler University of Manitoba GCA_000350485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/485/GCF_000350485.1_C.termitidis_454_shotgun_Newbler/ na assembly from type material na haploid bacteria 6415858 6415858 41.000000 0 78 78 NCBI RefSeq GCF_000350485.1-RS_2026_04_14 2026-04-14 5420 5299 66 23704187 GCF_000350505.1 PRJNA224116 SAMN01924847 AOUG00000000.1 na 1262664 28450 Burkholderia pseudomallei NCTC 13392 strain=NCTC 13392 na latest Contig Major Full 2013-04-03 NCTC13392_merged Northern Arizona University GCA_000350505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/505/GCF_000350505.1_NCTC13392_merged/ na na na haploid bacteria 7164815 7164815 68.000000 0 48 48 NCBI RefSeq GCF_000350505.1-RS_2026_03_28 2026-03-28 6436 6212 77 23704173 GCF_000350525.1 PRJNA224116 SAMN02470216 AOCN00000000.1 reference genome 1238186 664638 Leucobacter salsicius M1-8 strain=M1-8 na latest Contig Major Full 2013-04-03 Leucobacter salsicius M1-8T draft genome Kyunghee University GCA_000350525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/525/GCF_000350525.1_Leucobacter_salsicius_M1-8T_draft_genome/ na assembly from type material na haploid bacteria 3185418 3185418 64.500000 0 28 28 NCBI RefSeq GCF_000350525.1-RS_2025_12_13 2025-12-13 2901 2796 63 na GCF_000350545.1 PRJNA224116 SAMN02469830 APJX00000000.1 reference genome 1286635 190898 Desulfotignum phosphitoxidans DSM 13687 strain=DSM 13687 na latest Contig Major Full 2013-04-03 DPO2 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000350545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/545/GCF_000350545.1_DPO2/ na assembly from type material na haploid bacteria 4998761 4998761 51.500000 0 38 38 NCBI RefSeq GCF_000350545.1-RS_2025_12_09 2025-12-09 4717 4604 58 23704177 GCF_000350565.1 PRJNA224116 SAMN02469887 AOUH00000000.1 na 1295141 76761 Pseudomonas veronii 1YdBTEX2 strain=1YdBTEX2 na latest Contig Major Full 2013-04-03 P.ver1YdBTEX2v.1 Bacterial Abiotic Stress and Survival Improvement Network - BACSIN GCA_000350565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/565/GCF_000350565.1_P.ver1YdBTEX2v.1/ na na na haploid bacteria 6680036 6680036 60.500000 0 63 63 NCBI RefSeq GCF_000350565.1-RS_2025_07_31 2025-07-31 6198 5922 74 23682152 GCF_000350585.1 PRJNA224116 SAMN01162017 AOUB00000000.1 na 1193054 28182 Leptospira noguchii str. Cascata strain=Cascata na latest Contig Major Full 2013-04-03 gls454073v01 J. Craig Venter Institute GCA_000350585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/585/GCF_000350585.1_gls454073v01/ na na na haploid bacteria 4547785 4547785 35.500000 0 338 338 NCBI RefSeq GCF_000350585.1-RS_2025_08_25 2025-08-25 3911 3563 43 na GCF_000350605.1 PRJNA224116 SAMN01162022 AOUC00000000.1 na 1193055 28182 Leptospira noguchii str. Hook strain=Hook na latest Contig Major Full 2013-04-03 gls454074v01 J. Craig Venter Institute GCA_000350605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/605/GCF_000350605.1_gls454074v01/ na na na haploid bacteria 4545395 4545395 35.500000 0 300 300 NCBI RefSeq GCF_000350605.1-RS_2025_08_25 2025-08-25 3761 3455 42 na GCF_000350625.1 PRJNA224116 SAMN00847642 ANSN00000000.1 na 1169324 562 Escherichia coli KTE2 strain=KTE2 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE2_V1 Broad Institute GCA_000350625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/625/GCF_000350625.1_Esch_coli_KTE2_V1/ na na na haploid bacteria 5397636 5272508 51.000000 0 14 64 NCBI RefSeq GCF_000350625.1-RS_2025_06_13 2025-06-13 5192 4890 100 na GCF_000350645.1 PRJNA224116 SAMN00847643 ANSO00000000.1 na 1169325 562 Escherichia coli KTE4 strain=KTE4 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE4_V1 Broad Institute GCA_000350645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/645/GCF_000350645.1_Esch_coli_KTE4_V1/ na na na haploid bacteria 5188486 5129241 50.500000 0 10 56 NCBI RefSeq GCF_000350645.1-RS_2025_06_13 2025-06-13 5092 4752 102 na GCF_000350665.1 PRJNA224116 SAMN00847644 ANSP00000000.1 na 1169326 562 Escherichia coli KTE5 strain=KTE5 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE5_V1 Broad Institute GCA_000350665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/665/GCF_000350665.1_Esch_coli_KTE5_V1/ na na na haploid bacteria 5296974 5230036 50.500000 0 10 65 NCBI RefSeq GCF_000350665.1-RS_2025_06_13 2025-06-13 5257 4903 98 na GCF_000350685.1 PRJNA224116 SAMN00847648 ANSQ00000000.1 na 1169330 562 Escherichia coli KTE10 strain=KTE10 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE10_V1 Broad Institute GCA_000350685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/685/GCF_000350685.1_Esch_coli_KTE10_V1/ na na na haploid bacteria 5137634 5039964 51.000000 0 9 56 NCBI RefSeq GCF_000350685.1-RS_2025_06_13 2025-06-13 5026 4705 79 na GCF_000350705.1 PRJNA224116 SAMN00847649 ANSR00000000.1 na 1169331 1169331 Escherichia sp. KTE11 strain=KTE11 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE11_V1 Broad Institute GCA_000350705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/705/GCF_000350705.1_Esch_coli_KTE11_V1/ na na na haploid bacteria 4527146 4486744 50.500000 0 7 47 NCBI RefSeq GCF_000350705.1-RS_2025_01_01 2025-01-01 4328 4105 109 na GCF_000350725.1 PRJNA224116 SAMN00847650 ANSS00000000.1 na 1169332 562 Escherichia coli KTE12 strain=KTE12 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE12_V1 Broad Institute GCA_000350725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/725/GCF_000350725.1_Esch_coli_KTE12_V1/ na na na haploid bacteria 5021998 4982067 51.000000 0 17 53 NCBI RefSeq GCF_000350725.1-RS_2025_06_13 2025-06-13 4875 4555 100 na GCF_000350745.1 PRJNA224116 SAMN00847652 ANST00000000.1 na 1169334 562 Escherichia coli KTE15 strain=KTE15 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE15_V1 Broad Institute GCA_000350745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/745/GCF_000350745.1_Esch_coli_KTE15_V1/ na na na haploid bacteria 5253859 5214995 50.500000 0 13 57 NCBI RefSeq GCF_000350745.1-RS_2025_06_13 2025-06-13 5100 4742 103 na GCF_000350765.1 PRJNA224116 SAMN00847653 ANSU00000000.1 na 1169335 562 Escherichia coli KTE16 strain=KTE16 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE16_V1 Broad Institute GCA_000350765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/765/GCF_000350765.1_Esch_coli_KTE16_V1/ na na na haploid bacteria 5206869 5191030 50.500000 0 13 36 NCBI RefSeq GCF_000350765.1-RS_2025_06_13 2025-06-13 5130 4803 103 na GCF_000350785.1 PRJNA224116 SAMN00847658 ANSV00000000.1 na 1169340 562 Escherichia coli KTE21 strain=KTE21 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE21_V1 Broad Institute GCA_000350785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/785/GCF_000350785.1_Esch_coli_KTE21_V1/ na na na haploid bacteria 5590974 5565561 50.500000 0 29 71 NCBI RefSeq GCF_000350785.1-RS_2025_06_13 2025-06-13 5559 5169 106 na GCF_000350805.1 PRJNA224116 SAMN00847662 ANSW00000000.1 na 1169344 562 Escherichia coli KTE25 strain=KTE25 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE25_V1 Broad Institute GCA_000350805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/805/GCF_000350805.1_Esch_coli_KTE25_V1/ na na na haploid bacteria 4998178 4983785 50.500000 0 6 30 NCBI RefSeq GCF_000350805.1-RS_2025_06_13 2025-06-13 4901 4641 92 na GCF_000350825.1 PRJNA224116 SAMN00847663 ANSX00000000.1 na 1169345 562 Escherichia coli KTE26 strain=KTE26 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE26_V1 Broad Institute GCA_000350825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/825/GCF_000350825.1_Esch_coli_KTE26_V1/ na assembly designated as clade exemplar na haploid bacteria 5308839 5267561 50.500000 0 11 41 NCBI RefSeq GCF_000350825.1-RS_2025_06_13 2025-06-13 5159 4886 80 na GCF_000350845.1 PRJNA224116 SAMN00847665 ANSY00000000.1 na 1169347 562 Escherichia coli KTE28 strain=KTE28 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE28_V1 Broad Institute GCA_000350845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/845/GCF_000350845.1_Esch_coli_KTE28_V1/ na na na haploid bacteria 5054397 5001996 50.500000 0 12 33 NCBI RefSeq GCF_000350845.1-RS_2025_06_13 2025-06-13 4900 4633 94 na GCF_000350865.1 PRJNA224116 SAMN00847674 ANSZ00000000.1 na 1169356 562 Escherichia coli KTE39 strain=KTE39 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE39_V1 Broad Institute GCA_000350865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/865/GCF_000350865.1_Esch_coli_KTE39_V1/ na na na haploid bacteria 5293495 5243602 50.500000 0 10 46 NCBI RefSeq GCF_000350865.1-RS_2025_06_13 2025-06-13 5170 4813 92 na GCF_000350885.1 PRJNA224116 SAMN00847679 ANTA00000000.1 na 1169361 562 Escherichia coli KTE44 strain=KTE44 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE44_V1 Broad Institute GCA_000350885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/885/GCF_000350885.1_Esch_coli_KTE44_V1/ na na na haploid bacteria 5248521 5196727 50.500000 0 25 78 NCBI RefSeq GCF_000350885.1-RS_2025_06_13 2025-06-13 5221 4803 111 na GCF_000350905.1 PRJNA224116 SAMN00974035 ANTB00000000.1 na 1181726 562 Escherichia coli KTE178 strain=KTE178 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE178_V1 Broad Institute GCA_000350905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/905/GCF_000350905.1_Esch_coli_KTE178_V1/ na na na haploid bacteria 5307892 5270802 50.500000 0 11 40 NCBI RefSeq GCF_000350905.1-RS_2025_06_13 2025-06-13 5184 4914 81 na GCF_000350925.1 PRJNA224116 SAMN00974036 ANTC00000000.1 na 1181727 562 Escherichia coli KTE181 strain=KTE181 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE181_V1 Broad Institute GCA_000350925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/925/GCF_000350925.1_Esch_coli_KTE181_V1/ na na na haploid bacteria 5362232 5299129 50.500000 0 9 70 NCBI RefSeq GCF_000350925.1-RS_2025_06_13 2025-06-13 5267 4973 97 na GCF_000350945.1 PRJNA224116 SAMN00974042 ANTD00000000.1 na 1181733 562 Escherichia coli KTE187 strain=KTE187 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE187_V1 Broad Institute GCA_000350945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/945/GCF_000350945.1_Esch_coli_KTE187_V1/ na na na haploid bacteria 4960024 4915642 50.500000 0 8 37 NCBI RefSeq GCF_000350945.1-RS_2025_06_13 2025-06-13 4746 4465 92 na GCF_000350965.1 PRJNA224116 SAMN00974043 ANTE00000000.1 na 1181734 562 Escherichia coli KTE188 strain=KTE188 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE188_V1 Broad Institute GCA_000350965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/965/GCF_000350965.1_Esch_coli_KTE188_V1/ na na na haploid bacteria 5249661 5199033 50.500000 0 10 47 NCBI RefSeq GCF_000350965.1-RS_2025_06_13 2025-06-13 5045 4696 91 na GCF_000350985.1 PRJNA224116 SAMN00974044 ANTF00000000.1 na 1181735 562 Escherichia coli KTE189 strain=KTE189 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE189_V1 Broad Institute GCA_000350985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/350/985/GCF_000350985.1_Esch_coli_KTE189_V1/ na na na haploid bacteria 5166175 5107065 50.500000 0 13 48 NCBI RefSeq GCF_000350985.1-RS_2025_06_13 2025-06-13 4968 4662 98 na GCF_000351005.1 PRJNA224116 SAMN00974046 ANTG00000000.1 na 1181737 562 Escherichia coli KTE191 strain=KTE191 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE191_V1 Broad Institute GCA_000351005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/005/GCF_000351005.1_Esch_coli_KTE191_V1/ na na na haploid bacteria 5401591 5375759 50.500000 0 12 35 NCBI RefSeq GCF_000351005.1-RS_2025_06_14 2025-06-14 5263 4929 97 na GCF_000351025.1 PRJNA224116 SAMN00974048 ANTH00000000.1 na 1181739 562 Escherichia coli KTE193 strain=KTE193 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE193_V1 Broad Institute GCA_000351025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/025/GCF_000351025.1_Esch_coli_KTE193_V1/ na na na haploid bacteria 5507665 5398218 50.500000 0 9 64 NCBI RefSeq GCF_000351025.1-RS_2025_06_13 2025-06-13 5339 5001 106 na GCF_000351045.1 PRJNA224116 SAMN00974056 ANTI00000000.1 na 1181747 562 Escherichia coli KTE201 strain=KTE201 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE201_V1 Broad Institute GCA_000351045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/045/GCF_000351045.1_Esch_coli_KTE201_V1/ na na na haploid bacteria 5281663 5239901 50.500000 0 13 49 NCBI RefSeq GCF_000351045.1-RS_2025_06_14 2025-06-14 5096 4704 96 na GCF_000351065.1 PRJNA224116 SAMN00974059 ANTJ00000000.1 na 1181750 562 Escherichia coli KTE204 strain=KTE204 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE204_V1 Broad Institute GCA_000351065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/065/GCF_000351065.1_Esch_coli_KTE204_V1/ na na na haploid bacteria 5255257 5208939 51.000000 0 10 50 NCBI RefSeq GCF_000351065.1-RS_2025_06_13 2025-06-13 5077 4792 90 na GCF_000351085.1 PRJNA224116 SAMN00974060 ANTK00000000.1 na 1181751 562 Escherichia coli KTE205 strain=KTE205 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE205_V1 Broad Institute GCA_000351085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/085/GCF_000351085.1_Esch_coli_KTE205_V1/ na na na haploid bacteria 5367999 5302065 50.500000 0 9 56 NCBI RefSeq GCF_000351085.1-RS_2025_06_14 2025-06-14 5247 4867 111 na GCF_000351105.1 PRJNA224116 SAMN00974061 ANTL00000000.1 na 1181752 562 Escherichia coli KTE206 strain=KTE206 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE206_V1 Broad Institute GCA_000351105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/105/GCF_000351105.1_Esch_coli_KTE206_V1/ na na na haploid bacteria 5079341 5031282 50.500000 0 8 34 NCBI RefSeq GCF_000351105.1-RS_2025_06_13 2025-06-13 4859 4568 80 na GCF_000351125.1 PRJNA224116 SAMN00974063 ANTM00000000.1 na 1181754 562 Escherichia coli KTE208 strain=KTE208 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE208_V1 Broad Institute GCA_000351125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/125/GCF_000351125.1_Esch_coli_KTE208_V1/ na na na haploid bacteria 5355119 5311247 50.500000 0 12 51 NCBI RefSeq GCF_000351125.1-RS_2025_06_14 2025-06-14 5230 4945 80 na GCF_000351145.1 PRJNA224116 SAMN00974065 ANTN00000000.1 na 1181756 562 Escherichia coli KTE210 strain=KTE210 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE210_V1 Broad Institute GCA_000351145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/145/GCF_000351145.1_Esch_coli_KTE210_V1/ na na na haploid bacteria 4924873 4896455 50.500000 0 15 38 NCBI RefSeq GCF_000351145.1-RS_2025_06_13 2025-06-13 4783 4556 96 na GCF_000351165.1 PRJNA224116 SAMN00974067 ANTO00000000.1 na 1181758 562 Escherichia coli KTE212 strain=KTE212 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE212_V1 Broad Institute GCA_000351165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/165/GCF_000351165.1_Esch_coli_KTE212_V1/ na na na haploid bacteria 4886039 4830417 51.000000 0 5 38 NCBI RefSeq GCF_000351165.1-RS_2025_06_14 2025-06-14 4675 4387 101 na GCF_000351185.1 PRJNA224116 SAMN00974068 ANTP00000000.1 na 1181759 562 Escherichia coli KTE213 strain=KTE213 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE213_V1 Broad Institute GCA_000351185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/185/GCF_000351185.1_Esch_coli_KTE213_V1/ na na na haploid bacteria 5082634 5032547 50.500000 0 4 59 NCBI RefSeq GCF_000351185.1-RS_2025_06_13 2025-06-13 4959 4695 93 na GCF_000351205.1 PRJNA224116 SAMN00974069 ANTQ00000000.1 na 1181760 562 Escherichia coli KTE214 strain=KTE214 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE214_V1 Broad Institute GCA_000351205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/205/GCF_000351205.1_Esch_coli_KTE214_V1/ na na na haploid bacteria 5405374 5329896 50.500000 0 7 45 NCBI RefSeq GCF_000351205.1-RS_2025_06_14 2025-06-14 5244 4854 100 na GCF_000351225.1 PRJNA224116 SAMN00974071 ANTR00000000.1 na 1181762 562 Escherichia coli KTE216 strain=KTE216 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE216_V1 Broad Institute GCA_000351225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/225/GCF_000351225.1_Esch_coli_KTE216_V1/ na na na haploid bacteria 5309892 5282208 50.500000 0 16 48 NCBI RefSeq GCF_000351225.1-RS_2025_06_13 2025-06-13 5257 4920 102 na GCF_000351245.1 PRJNA224116 SAMN00974075 ANTS00000000.1 na 1181766 562 Escherichia coli KTE220 strain=KTE220 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE220_V1 Broad Institute GCA_000351245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/245/GCF_000351245.1_Esch_coli_KTE220_V1/ na na na haploid bacteria 5124099 5099948 50.500000 0 11 36 NCBI RefSeq GCF_000351245.1-RS_2025_06_14 2025-06-14 4937 4590 106 na GCF_000351265.1 PRJNA224116 SAMN00974079 ANTT00000000.1 na 1181770 562 Escherichia coli KTE224 strain=KTE224 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE224_V1 Broad Institute GCA_000351265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/265/GCF_000351265.1_Esch_coli_KTE224_V1/ na na na haploid bacteria 5334087 5213549 50.500000 0 13 50 NCBI RefSeq GCF_000351265.1-RS_2025_06_13 2025-06-13 5081 4760 102 na GCF_000351285.1 PRJNA224116 SAMN00974083 ANTU00000000.1 na 1181774 562 Escherichia coli KTE228 strain=KTE228 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE228_V1 Broad Institute GCA_000351285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/285/GCF_000351285.1_Esch_coli_KTE228_V1/ na na na haploid bacteria 5235232 5157834 50.500000 0 7 52 NCBI RefSeq GCF_000351285.1-RS_2025_06_14 2025-06-14 5022 4762 87 na GCF_000351305.1 PRJNA224116 SAMN00974085 ANTV00000000.1 na 1181776 562 Escherichia coli KTE230 strain=KTE230 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE230_V1 Broad Institute GCA_000351305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/305/GCF_000351305.1_Esch_coli_KTE230_V1/ na na na haploid bacteria 5227898 5165861 50.500000 0 15 52 NCBI RefSeq GCF_000351305.1-RS_2025_06_13 2025-06-13 5029 4686 89 na GCF_000351325.1 PRJNA224116 SAMN00974086 ANTW00000000.1 na 1181777 562 Escherichia coli KTE233 strain=KTE233 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE233_V1 Broad Institute GCA_000351325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/325/GCF_000351325.1_Esch_coli_KTE233_V1/ na na na haploid bacteria 4963898 4883581 50.500000 0 3 72 NCBI RefSeq GCF_000351325.1-RS_2025_06_14 2025-06-14 4906 4555 91 na GCF_000351345.1 PRJNA224116 SAMN00974087 ANTX00000000.1 na 1181778 562 Escherichia coli KTE234 strain=KTE234 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE234_V1 Broad Institute GCA_000351345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/345/GCF_000351345.1_Esch_coli_KTE234_V1/ na na na haploid bacteria 5059227 4917025 50.500000 0 10 90 NCBI RefSeq GCF_000351345.1-RS_2025_06_13 2025-06-13 4848 4546 75 na GCF_000351365.1 PRJNA224116 SAMN00974088 ANTY00000000.1 na 1181779 562 Escherichia coli KTE235 strain=KTE235 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE235_V1 Broad Institute GCA_000351365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/365/GCF_000351365.1_Esch_coli_KTE235_V1/ na na na haploid bacteria 5346493 5273162 50.500000 0 5 62 NCBI RefSeq GCF_000351365.1-RS_2025_06_14 2025-06-14 5195 4900 95 na GCF_000351385.1 PRJNA224116 SAMN00974089 ANTZ00000000.1 na 1181780 562 Escherichia coli KTE236 strain=KTE236 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE236_V1 Broad Institute GCA_000351385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/385/GCF_000351385.1_Esch_coli_KTE236_V1/ na na na haploid bacteria 5383352 5337152 50.500000 0 17 62 NCBI RefSeq GCF_000351385.1-RS_2026_06_13 2026-06-13 5290 4956 98 na GCF_000351405.1 PRJNA224116 SAMN00974090 ANUA00000000.1 na 1181781 562 Escherichia coli KTE237 strain=KTE237 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE237_V1 Broad Institute GCA_000351405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/405/GCF_000351405.1_Esch_coli_KTE237_V1/ na na na haploid bacteria 5480688 5313768 50.500000 0 10 69 NCBI RefSeq GCF_000351405.1-RS_2025_06_13 2025-06-13 5255 4916 97 na GCF_000351425.1 PRJNA224116 SAMN00854606 ANUB00000000.1 na 1182654 562 Escherichia coli KTE47 strain=KTE47 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE47_V1 Broad Institute GCA_000351425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/425/GCF_000351425.1_Esch_coli_KTE47_V1/ na na na haploid bacteria 4987473 4975730 50.500000 0 11 26 NCBI RefSeq GCF_000351425.1-RS_2025_06_13 2025-06-13 4890 4537 113 na GCF_000351445.1 PRJNA224116 SAMN00854608 ANUC00000000.1 na 1182656 562 Escherichia coli KTE49 strain=KTE49 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE49_V1 Broad Institute GCA_000351445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/445/GCF_000351445.1_Esch_coli_KTE49_V1/ na na na haploid bacteria 5263728 5188191 50.500000 0 6 61 NCBI RefSeq GCF_000351445.1-RS_2025_06_14 2025-06-14 5158 4838 86 na GCF_000351465.1 PRJNA224116 SAMN00854610 ANUD00000000.1 na 1182658 562 Escherichia coli KTE51 strain=KTE51 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE51_V1 Broad Institute GCA_000351465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/465/GCF_000351465.1_Esch_coli_KTE51_V1/ na na na haploid bacteria 5276796 5163027 50.500000 0 29 108 NCBI RefSeq GCF_000351465.1-RS_2025_06_13 2025-06-13 5191 4789 94 na GCF_000351485.1 PRJNA224116 SAMN00854612 ANUE00000000.1 na 1182660 562 Escherichia coli KTE53 strain=KTE53 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE53_V1 Broad Institute GCA_000351485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/485/GCF_000351485.1_Esch_coli_KTE53_V1/ na na na haploid bacteria 5211466 5188676 50.500000 0 15 39 NCBI RefSeq GCF_000351485.1-RS_2025_06_13 2025-06-13 5075 4757 101 na GCF_000351505.1 PRJNA224116 SAMN00854614 ANUF00000000.1 na 1182662 562 Escherichia coli KTE55 strain=KTE55 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE55_V1 Broad Institute GCA_000351505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/505/GCF_000351505.1_Esch_coli_KTE55_V1/ na na na haploid bacteria 5220513 5191837 50.500000 0 11 33 NCBI RefSeq GCF_000351505.1-RS_2025_06_13 2025-06-13 5119 4820 92 na GCF_000351525.1 PRJNA224116 SAMN00854615 ANUG00000000.1 na 1182663 562 Escherichia coli KTE56 strain=KTE56 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE56_V1 Broad Institute GCA_000351525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/525/GCF_000351525.1_Esch_coli_KTE56_V1/ na na na haploid bacteria 4826050 4783899 50.500000 0 4 40 NCBI RefSeq GCF_000351525.1-RS_2025_06_13 2025-06-13 4647 4362 98 na GCF_000351545.1 PRJNA224116 SAMN00854616 ANUH00000000.1 na 1182664 562 Escherichia coli KTE57 strain=KTE57 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE57_V1 Broad Institute GCA_000351545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/545/GCF_000351545.1_Esch_coli_KTE57_V1/ na na na haploid bacteria 5168251 5133891 50.500000 0 12 38 NCBI RefSeq GCF_000351545.1-RS_2025_06_13 2025-06-13 5030 4696 98 na GCF_000351565.1 PRJNA224116 SAMN00854617 ANUI00000000.1 na 1182665 562 Escherichia coli KTE58 strain=KTE58 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE58_V1 Broad Institute GCA_000351565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/565/GCF_000351565.1_Esch_coli_KTE58_V1/ na na na haploid bacteria 5300474 5197505 50.500000 0 7 44 NCBI RefSeq GCF_000351565.1-RS_2025_06_13 2025-06-13 5113 4798 91 na GCF_000351585.1 PRJNA224116 SAMN00854619 ANUJ00000000.1 na 1182667 562 Escherichia coli KTE60 strain=KTE60 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE60_V1 Broad Institute GCA_000351585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/585/GCF_000351585.1_Esch_coli_KTE60_V1/ na na na haploid bacteria 5070788 5058460 50.500000 0 20 38 NCBI RefSeq GCF_000351585.1-RS_2025_06_13 2025-06-13 4888 4601 97 na GCF_000351605.1 PRJNA224116 SAMN00854621 ANUK00000000.1 na 1182669 562 Escherichia coli KTE62 strain=KTE62 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE62_V1 Broad Institute GCA_000351605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/605/GCF_000351605.1_Esch_coli_KTE62_V1/ na na na haploid bacteria 5144117 5106869 50.500000 0 11 36 NCBI RefSeq GCF_000351605.1-RS_2025_06_13 2025-06-13 5060 4726 100 na GCF_000351625.1 PRJNA224116 SAMN00854625 ANUL00000000.1 na 1182673 562 Escherichia coli KTE66 strain=KTE66 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE66_V1 Broad Institute GCA_000351625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/625/GCF_000351625.1_Esch_coli_KTE66_V1/ na na na haploid bacteria 5198299 5150212 50.500000 0 14 51 NCBI RefSeq GCF_000351625.1-RS_2025_06_13 2025-06-13 5025 4770 98 na GCF_000351645.1 PRJNA224116 SAMN00854626 ANUM00000000.1 na 1182674 562 Escherichia coli KTE67 strain=KTE67 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE67_V1 Broad Institute GCA_000351645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/645/GCF_000351645.1_Esch_coli_KTE67_V1/ na na na haploid bacteria 5029494 4997489 50.500000 0 5 32 NCBI RefSeq GCF_000351645.1-RS_2025_06_14 2025-06-14 4798 4504 86 na GCF_000351665.1 PRJNA224116 SAMN00854631 ANUN00000000.1 na 1182679 562 Escherichia coli KTE72 strain=KTE72 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE72_V1 Broad Institute GCA_000351665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/665/GCF_000351665.1_Esch_coli_KTE72_V1/ na na na haploid bacteria 5219548 5204437 50.500000 0 15 36 NCBI RefSeq GCF_000351665.1-RS_2025_06_13 2025-06-13 5113 4799 105 na GCF_000351685.1 PRJNA224116 SAMN00854634 ANUO00000000.1 na 1182682 562 Escherichia coli KTE75 strain=KTE75 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE75_V1 Broad Institute GCA_000351685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/685/GCF_000351685.1_Esch_coli_KTE75_V1/ na na na haploid bacteria 5797832 5734748 50.500000 0 37 83 NCBI RefSeq GCF_000351685.1-RS_2026_06_13 2026-06-13 5721 5390 106 na GCF_000351705.1 PRJNA224116 SAMN00854635 ANUP00000000.1 na 1182683 562 Escherichia coli KTE76 strain=KTE76 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE76_V1 Broad Institute GCA_000351705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/705/GCF_000351705.1_Esch_coli_KTE76_V1/ na na na haploid bacteria 5393261 5341579 50.500000 0 6 57 NCBI RefSeq GCF_000351705.1-RS_2025_06_13 2025-06-13 5223 4881 102 na GCF_000351725.1 PRJNA224116 SAMN00854636 ANUQ00000000.1 na 1182684 562 Escherichia coli KTE77 strain=KTE77 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE77_V1 Broad Institute GCA_000351725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/725/GCF_000351725.1_Esch_coli_KTE77_V1/ na na na haploid bacteria 4772642 4751069 51.000000 0 8 38 NCBI RefSeq GCF_000351725.1-RS_2025_06_14 2025-06-14 4610 4410 85 na GCF_000351745.1 PRJNA224116 SAMN00854639 ANUR00000000.1 na 1182687 562 Escherichia coli KTE80 strain=KTE80 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE80_V1 Broad Institute GCA_000351745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/745/GCF_000351745.1_Esch_coli_KTE80_V1/ na na na haploid bacteria 5329538 5293575 50.500000 0 28 60 NCBI RefSeq GCF_000351745.1-RS_2025_06_13 2025-06-13 5220 4927 102 na GCF_000351765.1 PRJNA224116 SAMN00854640 ANUS00000000.1 na 1182688 562 Escherichia coli KTE81 strain=KTE81 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE81_V1 Broad Institute GCA_000351765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/765/GCF_000351765.1_Esch_coli_KTE81_V1/ na na na haploid bacteria 4791673 4753012 51.000000 0 8 42 NCBI RefSeq GCF_000351765.1-RS_2025_06_14 2025-06-14 4625 4353 91 na GCF_000351785.1 PRJNA224116 SAMN00854641 ANUT00000000.1 na 1182689 562 Escherichia coli KTE83 strain=KTE83 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE83_V1 Broad Institute GCA_000351785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/785/GCF_000351785.1_Esch_coli_KTE83_V1/ na na na haploid bacteria 5351502 5330588 50.500000 0 16 46 NCBI RefSeq GCF_000351785.1-RS_2025_06_13 2025-06-13 5282 4998 95 na GCF_000351805.1 PRJNA224116 SAMN00854643 ANUU00000000.1 na 1182691 562 Escherichia coli KTE86 strain=KTE86 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE86_V1 Broad Institute GCA_000351805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/805/GCF_000351805.1_Esch_coli_KTE86_V1/ na na na haploid bacteria 5097715 5074636 50.500000 0 15 33 NCBI RefSeq GCF_000351805.1-RS_2025_06_13 2025-06-13 4928 4609 96 na GCF_000351825.1 PRJNA224116 SAMN00854644 ANUV00000000.1 na 1182692 562 Escherichia coli KTE87 strain=KTE87 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE87_V1 Broad Institute GCA_000351825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/825/GCF_000351825.1_Esch_coli_KTE87_V1/ na na na haploid bacteria 5272779 5224895 50.500000 0 11 50 NCBI RefSeq GCF_000351825.1-RS_2025_06_13 2025-06-13 5075 4714 110 na GCF_000351845.1 PRJNA224116 SAMN00854648 ANUW00000000.1 na 1182696 562 Escherichia coli KTE93 strain=KTE93 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE93_V1 Broad Institute GCA_000351845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/845/GCF_000351845.1_Esch_coli_KTE93_V1/ na na na haploid bacteria 5077065 5050517 50.500000 0 10 36 NCBI RefSeq GCF_000351845.1-RS_2025_06_13 2025-06-13 4878 4563 99 na GCF_000351865.1 PRJNA224116 SAMN00854658 ANUX00000000.1 na 1182706 562 Escherichia coli KTE111 strain=KTE111 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE111_V1 Broad Institute GCA_000351865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/865/GCF_000351865.1_Esch_coli_KTE111_V1/ na na na haploid bacteria 5102389 5030588 51.000000 0 7 68 NCBI RefSeq GCF_000351865.1-RS_2025_06_13 2025-06-13 4930 4605 94 na GCF_000351885.1 PRJNA224116 SAMN00854660 ANUY00000000.1 na 1182708 562 Escherichia coli KTE116 strain=KTE116 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE116_V1 Broad Institute GCA_000351885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/885/GCF_000351885.1_Esch_coli_KTE116_V1/ na na na haploid bacteria 5349239 5296521 51.000000 0 6 51 NCBI RefSeq GCF_000351885.1-RS_2025_06_13 2025-06-13 5209 4923 91 na GCF_000351905.1 PRJNA224116 SAMN00854662 ANUZ00000000.1 na 1182710 562 Escherichia coli KTE119 strain=KTE119 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE119_V1 Broad Institute GCA_000351905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/905/GCF_000351905.1_Esch_coli_KTE119_V1/ na na na haploid bacteria 5187393 5123539 51.000000 0 6 62 NCBI RefSeq GCF_000351905.1-RS_2025_06_13 2025-06-13 5087 4769 97 na GCF_000351925.1 PRJNA224116 SAMN00854674 ANVA00000000.1 na 1182722 562 Escherichia coli KTE142 strain=KTE142 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE142_V1 Broad Institute GCA_000351925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/925/GCF_000351925.1_Esch_coli_KTE142_V1/ na na na haploid bacteria 5031151 4948299 50.500000 0 17 89 NCBI RefSeq GCF_000351925.1-RS_2025_06_13 2025-06-13 4887 4537 94 na GCF_000351945.1 PRJNA224116 SAMN00854675 ANVB00000000.1 na 1182723 562 Escherichia coli KTE143 strain=KTE143 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE143_V1 Broad Institute GCA_000351945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/945/GCF_000351945.1_Esch_coli_KTE143_V1/ na na na haploid bacteria 5079910 5021526 50.500000 0 11 65 NCBI RefSeq GCF_000351945.1-RS_2025_06_13 2025-06-13 5018 4660 88 na GCF_000351985.1 PRJNA224116 SAMN00854685 ANVD00000000.1 na 1182733 562 Escherichia coli KTE161 strain=KTE161 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE161_V1 Broad Institute GCA_000351985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/351/985/GCF_000351985.1_Esch_coli_KTE161_V1/ na na na haploid bacteria 5117720 4997218 50.500000 0 3 56 NCBI RefSeq GCF_000351985.1-RS_2025_06_13 2025-06-13 4886 4502 89 na GCF_000352005.1 PRJNA224116 SAMN00854686 ANVE00000000.1 na 1182734 562 Escherichia coli KTE162 strain=KTE162 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE162_V1 Broad Institute GCA_000352005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/005/GCF_000352005.1_Esch_coli_KTE162_V1/ na na na haploid bacteria 5008885 4973481 51.000000 0 10 45 NCBI RefSeq GCF_000352005.1-RS_2025_06_13 2025-06-13 4895 4601 86 na GCF_000352025.1 PRJNA224116 SAMN00854688 ANVF00000000.1 na 1182736 562 Escherichia coli KTE169 strain=KTE169 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE169_V1 Broad Institute GCA_000352025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/025/GCF_000352025.1_Esch_coli_KTE169_V1/ na na na haploid bacteria 5256222 5205284 50.500000 0 13 44 NCBI RefSeq GCF_000352025.1-RS_2025_06_13 2025-06-13 5074 4760 95 na GCF_000352045.1 PRJNA224116 SAMN00854690 ANVG00000000.1 na 1182738 562 Escherichia coli KTE171 strain=KTE171 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE171_V1 Broad Institute GCA_000352045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/045/GCF_000352045.1_Esch_coli_KTE171_V1/ na na na haploid bacteria 4859600 4829673 51.000000 0 11 50 NCBI RefSeq GCF_000352045.1-RS_2025_06_13 2025-06-13 4747 4406 91 na GCF_000352065.1 PRJNA224116 SAMN00847645 ANVH00000000.1 na 1169327 562 Escherichia coli KTE6 strain=KTE6 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE6_V1 Broad Institute GCA_000352065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/065/GCF_000352065.1_Esch_coli_KTE6_V1/ na na na haploid bacteria 5213369 5200653 50.500000 0 4 27 NCBI RefSeq GCF_000352065.1-RS_2025_06_13 2025-06-13 5141 4842 103 na GCF_000352085.1 PRJNA224116 SAMN00847646 ANVI00000000.1 na 1169328 562 Escherichia coli KTE8 strain=KTE8 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE8_V1 Broad Institute GCA_000352085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/085/GCF_000352085.1_Esch_coli_KTE8_V1/ na na na haploid bacteria 5147721 5118987 50.500000 0 9 40 NCBI RefSeq GCF_000352085.1-RS_2025_06_13 2025-06-13 4942 4616 102 na GCF_000352105.1 PRJNA224116 SAMN00847647 ANVJ00000000.1 na 1169329 562 Escherichia coli KTE9 strain=KTE9 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE9_V1 Broad Institute GCA_000352105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/105/GCF_000352105.1_Esch_coli_KTE9_V1/ na na na haploid bacteria 5014999 4963515 50.500000 0 4 40 NCBI RefSeq GCF_000352105.1-RS_2025_06_13 2025-06-13 4736 4551 101 na GCF_000352125.1 PRJNA224116 SAMN00847654 ANVK00000000.1 na 1169336 562 Escherichia coli KTE17 strain=KTE17 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE17_V1 Broad Institute GCA_000352125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/125/GCF_000352125.1_Esch_coli_KTE17_V1/ na na na haploid bacteria 4915467 4897749 50.500000 0 3 28 NCBI RefSeq GCF_000352125.1-RS_2025_06_13 2025-06-13 4747 4519 88 na GCF_000352145.1 PRJNA224116 SAMN00847655 ANVL00000000.1 na 1169337 562 Escherichia coli KTE18 strain=KTE18 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE18_V1 Broad Institute GCA_000352145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/145/GCF_000352145.1_Esch_coli_KTE18_V1/ na na na haploid bacteria 4925857 4918269 50.500000 0 8 20 NCBI RefSeq GCF_000352145.1-RS_2025_06_13 2025-06-13 4785 4529 109 na GCF_000352165.1 PRJNA224116 SAMN00847680 ANVM00000000.1 na 1169362 562 Escherichia coli KTE45 strain=KTE45 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE45_V1 Broad Institute GCA_000352165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/165/GCF_000352165.1_Esch_coli_KTE45_V1/ na na na haploid bacteria 4860631 4841853 50.500000 0 3 31 NCBI RefSeq GCF_000352165.1-RS_2025_06_13 2025-06-13 4750 4519 91 na GCF_000352185.1 PRJNA224116 SAMN00847677 ANVN00000000.1 na 1169359 562 Escherichia coli KTE42 strain=KTE42 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE42_V1 Broad Institute GCA_000352185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/185/GCF_000352185.1_Esch_coli_KTE42_V1/ na na na haploid bacteria 4848297 4809931 51.000000 0 4 56 NCBI RefSeq GCF_000352185.1-RS_2025_06_13 2025-06-13 4701 4402 102 na GCF_000352205.1 PRJNA224116 SAMN00847660 ANVO00000000.1 na 1169342 562 Escherichia coli KTE23 strain=KTE23 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE23_V1 Broad Institute GCA_000352205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/205/GCF_000352205.1_Esch_coli_KTE23_V1/ na na na haploid bacteria 4876934 4869974 50.500000 0 6 14 NCBI RefSeq GCF_000352205.1-RS_2025_06_13 2025-06-13 4736 4497 106 na GCF_000352225.1 PRJNA224116 SAMN00847678 ANVP00000000.1 na 1169360 562 Escherichia coli KTE43 strain=KTE43 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE43_V1 Broad Institute GCA_000352225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/225/GCF_000352225.1_Esch_coli_KTE43_V1/ na na na haploid bacteria 5044424 5008353 50.500000 0 5 42 NCBI RefSeq GCF_000352225.1-RS_2025_06_13 2025-06-13 4847 4563 94 na GCF_000352245.1 PRJNA224116 SAMN00847666 ANVQ00000000.1 na 1169348 562 Escherichia coli KTE29 strain=KTE29 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE29_V1 Broad Institute GCA_000352245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/245/GCF_000352245.1_Esch_coli_KTE29_V1/ na na na haploid bacteria 4775481 4730181 51.000000 0 3 42 NCBI RefSeq GCF_000352245.1-RS_2025_06_13 2025-06-13 4579 4362 95 na GCF_000352265.1 PRJNA224116 SAMN00847659 ANVR00000000.1 na 1169341 562 Escherichia coli KTE22 strain=KTE22 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE22_V1 Broad Institute GCA_000352265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/265/GCF_000352265.1_Esch_coli_KTE22_V1/ na na na haploid bacteria 5141788 5112062 50.500000 0 6 31 NCBI RefSeq GCF_000352265.1-RS_2025_06_13 2025-06-13 5007 4704 88 na GCF_000352285.1 PRJNA224116 SAMN00854605 ANVS00000000.1 na 1182653 562 Escherichia coli KTE46 strain=KTE46 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE46_V1 Broad Institute GCA_000352285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/285/GCF_000352285.1_Esch_coli_KTE46_V1/ na na na haploid bacteria 4878533 4846917 50.500000 0 4 31 NCBI RefSeq GCF_000352285.1-RS_2025_06_13 2025-06-13 4753 4517 91 na GCF_000352305.1 PRJNA224116 SAMN00854607 ANVT00000000.1 na 1182655 562 Escherichia coli KTE48 strain=KTE48 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE48_V1 Broad Institute GCA_000352305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/305/GCF_000352305.1_Esch_coli_KTE48_V1/ na na na haploid bacteria 5018363 4979314 50.500000 0 6 34 NCBI RefSeq GCF_000352305.1-RS_2025_06_13 2025-06-13 4884 4603 105 na GCF_000352325.1 PRJNA224116 SAMN00854609 ANVU00000000.1 na 1182657 562 Escherichia coli KTE50 strain=KTE50 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE50_V1 Broad Institute GCA_000352325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/325/GCF_000352325.1_Esch_coli_KTE50_V1/ na na na haploid bacteria 5111071 5050485 50.500000 0 4 56 NCBI RefSeq GCF_000352325.1-RS_2025_06_13 2025-06-13 4860 4593 95 na GCF_000352345.1 PRJNA224116 SAMN00854613 ANVV00000000.1 na 1182661 562 Escherichia coli KTE54 strain=KTE54 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE54_V1 Broad Institute GCA_000352345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/345/GCF_000352345.1_Esch_coli_KTE54_V1/ na na na haploid bacteria 4805644 4780779 50.500000 0 2 36 NCBI RefSeq GCF_000352345.1-RS_2025_06_13 2025-06-13 4548 4345 82 na GCF_000352365.1 PRJNA224116 SAMN00854618 ANVW00000000.1 na 1182666 562 Escherichia coli KTE59 strain=KTE59 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE59_V1 Broad Institute GCA_000352365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/365/GCF_000352365.1_Esch_coli_KTE59_V1/ na na na haploid bacteria 5145928 5113537 50.500000 0 7 33 NCBI RefSeq GCF_000352365.1-RS_2025_06_13 2025-06-13 5006 4703 86 na GCF_000352385.1 PRJNA224116 SAMN00854622 ANVX00000000.1 na 1182670 562 Escherichia coli KTE63 strain=KTE63 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE63_V1 Broad Institute GCA_000352385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/385/GCF_000352385.1_Esch_coli_KTE63_V1/ na na na haploid bacteria 5060549 5040636 50.500000 0 8 24 NCBI RefSeq GCF_000352385.1-RS_2025_06_13 2025-06-13 4886 4575 104 na GCF_000352405.1 PRJNA224116 SAMN00854624 ANVY00000000.1 na 1182672 562 Escherichia coli KTE65 strain=KTE65 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE65_V1 Broad Institute GCA_000352405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/405/GCF_000352405.1_Esch_coli_KTE65_V1/ na na na haploid bacteria 5182215 5149683 50.500000 0 4 31 NCBI RefSeq GCF_000352405.1-RS_2025_06_13 2025-06-13 5067 4759 85 na GCF_000352425.1 PRJNA224116 SAMN00854637 ANVZ00000000.1 na 1182685 562 Escherichia coli KTE78 strain=KTE78 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE78_V1 Broad Institute GCA_000352425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/425/GCF_000352425.1_Esch_coli_KTE78_V1/ na na na haploid bacteria 4961011 4869796 50.500000 0 8 34 NCBI RefSeq GCF_000352425.1-RS_2025_06_13 2025-06-13 4635 4416 94 na GCF_000352445.1 PRJNA224116 SAMN00854638 ANWA00000000.1 na 1182686 562 Escherichia coli KTE79 strain=KTE79 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE79_V1 Broad Institute GCA_000352445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/445/GCF_000352445.1_Esch_coli_KTE79_V1/ na na na haploid bacteria 4916581 4860526 50.500000 0 2 26 NCBI RefSeq GCF_000352445.1-RS_2025_06_13 2025-06-13 4604 4400 80 na GCF_000352465.1 PRJNA224116 SAMN00854642 ANWB00000000.1 na 1182690 562 Escherichia coli KTE84 strain=KTE84 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE84_V1 Broad Institute GCA_000352465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/465/GCF_000352465.1_Esch_coli_KTE84_V1/ na na na haploid bacteria 4617802 4591470 50.500000 0 3 34 NCBI RefSeq GCF_000352465.1-RS_2025_06_13 2025-06-13 4490 4254 92 na GCF_000352485.1 PRJNA224116 SAMN00854646 ANWC00000000.1 na 1182694 562 Escherichia coli KTE91 strain=KTE91 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE91_V1 Broad Institute GCA_000352485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/485/GCF_000352485.1_Esch_coli_KTE91_V1/ na na na haploid bacteria 5058262 5040476 50.500000 0 5 20 NCBI RefSeq GCF_000352485.1-RS_2025_06_13 2025-06-13 4881 4587 97 na GCF_000352505.1 PRJNA224116 SAMN00854652 ANWD00000000.1 na 1182700 562 Escherichia coli KTE101 strain=KTE101 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE101_V1 Broad Institute GCA_000352505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/505/GCF_000352505.1_Esch_coli_KTE101_V1/ na na na haploid bacteria 5012607 4911804 50.500000 0 6 41 NCBI RefSeq GCF_000352505.1-RS_2025_06_13 2025-06-13 4865 4481 100 na GCF_000352525.1 PRJNA224116 SAMN00854659 ANWE00000000.1 na 1182707 562 Escherichia coli KTE115 strain=KTE115 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE115_V1 Broad Institute GCA_000352525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/525/GCF_000352525.1_Esch_coli_KTE115_V1/ na na na haploid bacteria 5174661 5138895 50.500000 0 5 32 NCBI RefSeq GCF_000352525.1-RS_2025_06_13 2025-06-13 4987 4696 101 na GCF_000352545.1 PRJNA224116 SAMN00854661 ANWF00000000.1 na 1182709 562 Escherichia coli KTE118 strain=KTE118 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE118_V1 Broad Institute GCA_000352545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/545/GCF_000352545.1_Esch_coli_KTE118_V1/ na na na haploid bacteria 5227221 5182047 50.500000 0 3 22 NCBI RefSeq GCF_000352545.1-RS_2025_06_14 2025-06-14 5079 4779 85 na GCF_000352565.1 PRJNA224116 SAMN00854664 ANWG00000000.1 na 1182712 562 Escherichia coli KTE123 strain=KTE123 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE123_V1 Broad Institute GCA_000352565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/565/GCF_000352565.1_Esch_coli_KTE123_V1/ na na na haploid bacteria 5180391 5167732 50.500000 0 5 25 NCBI RefSeq GCF_000352565.1-RS_2025_06_13 2025-06-13 5063 4746 97 na GCF_000352585.1 PRJNA224116 SAMN00854670 ANWH00000000.1 na 1182718 562 Escherichia coli KTE135 strain=KTE135 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE135_V1 Broad Institute GCA_000352585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/585/GCF_000352585.1_Esch_coli_KTE135_V1/ na na na haploid bacteria 4780979 4707549 51.000000 0 2 33 NCBI RefSeq GCF_000352585.1-RS_2025_06_14 2025-06-14 4556 4347 94 na GCF_000352605.1 PRJNA224116 SAMN00854671 ANWI00000000.1 na 1182719 562 Escherichia coli KTE136 strain=KTE136 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE136_V1 Broad Institute GCA_000352605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/605/GCF_000352605.1_Esch_coli_KTE136_V1/ na na na haploid bacteria 4729970 4688419 51.000000 0 7 32 NCBI RefSeq GCF_000352605.1-RS_2025_06_13 2025-06-13 4532 4289 92 na GCF_000352625.1 PRJNA224116 SAMN00854672 ANWJ00000000.1 na 1182720 562 Escherichia coli KTE140 strain=KTE140 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE140_V1 Broad Institute GCA_000352625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/625/GCF_000352625.1_Esch_coli_KTE140_V1/ na na na haploid bacteria 5089473 5053522 50.500000 0 5 33 NCBI RefSeq GCF_000352625.1-RS_2025_06_14 2025-06-14 4957 4705 93 na GCF_000352645.1 PRJNA224116 SAMN00854673 ANWK00000000.1 na 1182721 562 Escherichia coli KTE141 strain=KTE141 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE141_V1 Broad Institute GCA_000352645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/645/GCF_000352645.1_Esch_coli_KTE141_V1/ na na na haploid bacteria 5029119 4987395 50.500000 0 7 35 NCBI RefSeq GCF_000352645.1-RS_2025_06_13 2025-06-13 4817 4540 93 na GCF_000352665.1 PRJNA224116 SAMN00854676 ANWL00000000.1 na 1182724 562 Escherichia coli KTE144 strain=KTE144 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE144_V1 Broad Institute GCA_000352665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/665/GCF_000352665.1_Esch_coli_KTE144_V1/ na na na haploid bacteria 4890532 4854951 50.500000 0 8 29 NCBI RefSeq GCF_000352665.1-RS_2025_06_14 2025-06-14 4632 4447 92 na GCF_000352685.1 PRJNA224116 SAMN00854677 ANWM00000000.1 na 1182725 562 Escherichia coli KTE146 strain=KTE146 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE146_V1 Broad Institute GCA_000352685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/685/GCF_000352685.1_Esch_coli_KTE146_V1/ na na na haploid bacteria 5282039 5243431 50.500000 0 9 46 NCBI RefSeq GCF_000352685.1-RS_2025_06_13 2025-06-13 5072 4821 91 na GCF_000352705.1 PRJNA224116 SAMN00854678 ANWN00000000.1 na 1182726 562 Escherichia coli KTE147 strain=KTE147 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE147_V1 Broad Institute GCA_000352705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/705/GCF_000352705.1_Esch_coli_KTE147_V1/ na na na haploid bacteria 5015378 4971098 50.500000 0 3 37 NCBI RefSeq GCF_000352705.1-RS_2025_06_14 2025-06-14 4811 4597 85 na GCF_000352725.1 PRJNA224116 SAMN00854680 ANWO00000000.1 na 1182728 562 Escherichia coli KTE154 strain=KTE154 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE154_V1 Broad Institute GCA_000352725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/725/GCF_000352725.1_Esch_coli_KTE154_V1/ na na na haploid bacteria 4953205 4898555 51.000000 0 3 39 NCBI RefSeq GCF_000352725.1-RS_2025_06_13 2025-06-13 4719 4460 89 na GCF_000352745.1 PRJNA224116 SAMN00854683 ANWP00000000.1 na 1182731 562 Escherichia coli KTE158 strain=KTE158 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE158_V1 Broad Institute GCA_000352745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/745/GCF_000352745.1_Esch_coli_KTE158_V1/ na na na haploid bacteria 5011656 4938916 50.500000 0 5 47 NCBI RefSeq GCF_000352745.1-RS_2025_06_14 2025-06-14 4788 4583 78 na GCF_000352765.1 PRJNA224116 SAMN00854687 ANWQ00000000.1 na 1182735 562 Escherichia coli KTE165 strain=KTE165 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE165_V1 Broad Institute GCA_000352765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/765/GCF_000352765.1_Esch_coli_KTE165_V1/ na na na haploid bacteria 4757839 4731104 50.500000 0 3 22 NCBI RefSeq GCF_000352765.1-RS_2025_06_13 2025-06-13 4551 4356 79 na GCF_000352785.1 PRJNA224116 SAMN00974047 ANWR00000000.1 na 1181738 562 Escherichia coli KTE192 strain=KTE192 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE192_V1 Broad Institute GCA_000352785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/785/GCF_000352785.1_Esch_coli_KTE192_V1/ na na na haploid bacteria 4774595 4750886 50.500000 0 5 23 NCBI RefSeq GCF_000352785.1-RS_2025_06_14 2025-06-14 4587 4366 94 na GCF_000352805.1 PRJNA224116 SAMN00974049 ANWS00000000.1 na 1181740 562 Escherichia coli KTE194 strain=KTE194 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE194_V1 Broad Institute GCA_000352805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/805/GCF_000352805.1_Esch_coli_KTE194_V1/ na na na haploid bacteria 5156046 5131596 50.500000 0 9 34 NCBI RefSeq GCF_000352805.1-RS_2025_06_13 2025-06-13 4983 4660 89 na GCF_000352825.1 PRJNA224116 SAMN00974045 ANWT00000000.1 na 1181736 562 Escherichia coli KTE190 strain=KTE190 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE190_V1 Broad Institute GCA_000352825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/825/GCF_000352825.1_Esch_coli_KTE190_V1/ na na na haploid bacteria 5132135 5061335 50.500000 0 5 46 NCBI RefSeq GCF_000352825.1-RS_2025_06_14 2025-06-14 4902 4657 96 na GCF_000352845.1 PRJNA224116 SAMN00974033 ANWU00000000.1 na 1181724 562 Escherichia coli KTE173 strain=KTE173 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE173_V1 Broad Institute GCA_000352845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/845/GCF_000352845.1_Esch_coli_KTE173_V1/ na na na haploid bacteria 5222333 5178899 50.500000 0 5 47 NCBI RefSeq GCF_000352845.1-RS_2025_06_13 2025-06-13 5101 4762 88 na GCF_000352865.1 PRJNA224116 SAMN00974034 ANWV00000000.1 na 1181725 562 Escherichia coli KTE175 strain=KTE175 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE175_V1 Broad Institute GCA_000352865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/865/GCF_000352865.1_Esch_coli_KTE175_V1/ na na na haploid bacteria 5247262 5217681 50.500000 0 6 33 NCBI RefSeq GCF_000352865.1-RS_2025_06_14 2025-06-14 5122 4777 94 na GCF_000352885.1 PRJNA224116 SAMN00974039 ANWW00000000.1 na 1181730 562 Escherichia coli KTE184 strain=KTE184 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE184_V1 Broad Institute GCA_000352885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/885/GCF_000352885.1_Esch_coli_KTE184_V1/ na na na haploid bacteria 5052303 5025790 50.500000 0 4 27 NCBI RefSeq GCF_000352885.1-RS_2025_06_13 2025-06-13 4874 4587 92 na GCF_000352905.1 PRJNA224116 SAMN00974038 ANWX00000000.1 na 1181729 562 Escherichia coli KTE183 strain=KTE183 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE183_V1 Broad Institute GCA_000352905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/905/GCF_000352905.1_Esch_coli_KTE183_V1/ na na na haploid bacteria 5120369 5073744 50.500000 0 5 40 NCBI RefSeq GCF_000352905.1-RS_2025_06_14 2025-06-14 4922 4607 90 na GCF_000352925.1 PRJNA224116 SAMN00974051 ANWY00000000.1 na 1181742 562 Escherichia coli KTE196 strain=KTE196 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE196_V1 Broad Institute GCA_000352925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/925/GCF_000352925.1_Esch_coli_KTE196_V1/ na na na haploid bacteria 4917133 4883311 51.000000 0 4 44 NCBI RefSeq GCF_000352925.1-RS_2025_06_13 2025-06-13 4686 4453 94 na GCF_000352945.1 PRJNA224116 SAMN00974052 ANWZ00000000.1 na 1181743 562 Escherichia coli KTE197 strain=KTE197 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE197_V1 Broad Institute GCA_000352945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/945/GCF_000352945.1_Esch_coli_KTE197_V1/ na na na haploid bacteria 4725614 4680375 50.500000 0 4 42 NCBI RefSeq GCF_000352945.1-RS_2025_06_13 2025-06-13 4567 4300 72 na GCF_000352965.1 PRJNA224116 SAMN00974057 ANXA00000000.1 na 1181748 562 Escherichia coli KTE202 strain=KTE202 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE202_V1 Broad Institute GCA_000352965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/965/GCF_000352965.1_Esch_coli_KTE202_V1/ na na na haploid bacteria 5195201 5158838 50.500000 0 8 46 NCBI RefSeq GCF_000352965.1-RS_2025_06_13 2025-06-13 4985 4704 101 na GCF_000352985.1 PRJNA224116 SAMN00974058 ANXB00000000.1 na 1181749 562 Escherichia coli KTE203 strain=KTE203 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE203_V1 Broad Institute GCA_000352985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/352/985/GCF_000352985.1_Esch_coli_KTE203_V1/ na na na haploid bacteria 4815949 4798547 50.500000 0 5 18 NCBI RefSeq GCF_000352985.1-RS_2025_06_14 2025-06-14 4650 4370 100 na GCF_000353005.1 PRJNA224116 SAMN00974062 ANXC00000000.1 na 1181753 562 Escherichia coli KTE207 strain=KTE207 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE207_V1 Broad Institute GCA_000353005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/005/GCF_000353005.1_Esch_coli_KTE207_V1/ na na na haploid bacteria 5047161 5022958 50.500000 0 6 31 NCBI RefSeq GCF_000353005.1-RS_2025_06_13 2025-06-13 4842 4566 95 na GCF_000353025.1 PRJNA224116 SAMN00974064 ANXD00000000.1 na 1181755 562 Escherichia coli KTE209 strain=KTE209 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE209_V1 Broad Institute GCA_000353025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/025/GCF_000353025.1_Esch_coli_KTE209_V1/ na na na haploid bacteria 5110084 5070043 50.500000 0 3 25 NCBI RefSeq GCF_000353025.1-RS_2025_06_14 2025-06-14 4934 4630 94 na GCF_000353045.1 PRJNA224116 SAMN00974066 ANXE00000000.1 na 1181757 562 Escherichia coli KTE211 strain=KTE211 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE211_V1 Broad Institute GCA_000353045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/045/GCF_000353045.1_Esch_coli_KTE211_V1/ na na na haploid bacteria 5002706 4988156 50.500000 0 9 32 NCBI RefSeq GCF_000353045.1-RS_2025_06_13 2025-06-13 4843 4527 107 na GCF_000353065.1 PRJNA224116 SAMN00974070 ANXF00000000.1 na 1181761 562 Escherichia coli KTE215 strain=KTE215 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE215_V1 Broad Institute GCA_000353065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/065/GCF_000353065.1_Esch_coli_KTE215_V1/ na na na haploid bacteria 5065988 5023319 50.500000 0 9 46 NCBI RefSeq GCF_000353065.1-RS_2025_06_14 2025-06-14 4836 4544 81 na GCF_000353085.1 PRJNA224116 SAMN00974072 ANXG00000000.1 na 1181763 562 Escherichia coli KTE217 strain=KTE217 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE217_V1 Broad Institute GCA_000353085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/085/GCF_000353085.1_Esch_coli_KTE217_V1/ na na na haploid bacteria 4950922 4935378 50.500000 0 7 27 NCBI RefSeq GCF_000353085.1-RS_2025_06_13 2025-06-13 4821 4583 88 na GCF_000353105.1 PRJNA224116 SAMN00974073 ANXH00000000.1 na 1181764 562 Escherichia coli KTE218 strain=KTE218 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE218_V1 Broad Institute GCA_000353105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/105/GCF_000353105.1_Esch_coli_KTE218_V1/ na na na haploid bacteria 5126054 5062208 50.500000 0 5 38 NCBI RefSeq GCF_000353105.1-RS_2025_06_14 2025-06-14 4877 4570 70 na GCF_000353125.1 PRJNA224116 SAMN00974078 ANXI00000000.1 na 1181769 562 Escherichia coli KTE223 strain=KTE223 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE223_V1 Broad Institute GCA_000353125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/125/GCF_000353125.1_Esch_coli_KTE223_V1/ na na na haploid bacteria 5100546 5073251 50.500000 0 9 45 NCBI RefSeq GCF_000353125.1-RS_2025_06_13 2025-06-13 4906 4574 89 na GCF_000353145.1 PRJNA224116 SAMN00974082 ANXJ00000000.1 na 1181773 562 Escherichia coli KTE227 strain=KTE227 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE227_V1 Broad Institute GCA_000353145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/145/GCF_000353145.1_Esch_coli_KTE227_V1/ na na na haploid bacteria 5139099 5101548 50.500000 0 4 29 NCBI RefSeq GCF_000353145.1-RS_2025_06_14 2025-06-14 5026 4703 88 na GCF_000353165.1 PRJNA224116 SAMN00974084 ANXK00000000.1 na 1181775 562 Escherichia coli KTE229 strain=KTE229 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE229_V1 Broad Institute GCA_000353165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/165/GCF_000353165.1_Esch_coli_KTE229_V1/ na na na haploid bacteria 5195903 5166171 50.500000 0 3 28 NCBI RefSeq GCF_000353165.1-RS_2025_06_13 2025-06-13 5059 4746 89 na GCF_000353185.1 PRJNA224116 SAMN00847690 ANXL00000000.1 na 1169372 562 Escherichia coli KTE104 strain=KTE104 na latest Scaffold Major Full 2013-04-05 Esch_coli_KTE104_V1 Broad Institute GCA_000353185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/185/GCF_000353185.1_Esch_coli_KTE104_V1/ na na na haploid bacteria 4973519 4973509 50.500000 0 110 111 NCBI RefSeq GCF_000353185.1-RS_2025_06_14 2025-06-14 4888 4562 93 na GCF_000353205.1 PRJNA224116 SAMN02470820 APKD00000000.1 na 1305739 1305738 Mycobacterium orygis 112400015 strain=112400015 na latest Contig Major Full 2013-04-04 Morygis1.0 Queen Mary, University of London GCA_000353205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/205/GCF_000353205.1_Morygis1.0/ na na na haploid bacteria 4282661 4282661 65.500000 0 108 108 NCBI RefSeq GCF_000353205.1-RS_2025_03_18 2025-03-18 4087 3776 51 na GCF_000353225.1 PRJNA224116 SAMN01920625 AOUW00000000.1 na 1291207 174 Leptospira borgpetersenii serovar Javanica str. L0066 strain=L0066 na latest Contig Major Full 2013-03-01 CA_glsol174 J. Craig Venter Institute GCA_000353225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/225/GCF_000353225.1_CA_glsol174/ na na na haploid bacteria 3879562 3879562 40.000000 0 93 93 NCBI RefSeq GCF_000353225.1-RS_2026_01_30 2026-01-30 3435 3186 45 na GCF_000353265.2 PRJNA224116 SAMN02471871 AMYG00000000.1 na 1198630 1757 Thermoanaerobacter thermohydrosulfuricus WC1 strain=WC1 na latest Scaffold Minor Full 2013-04-09 TthWC1 draft genome1 University of Manitoba GCA_000353265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/265/GCF_000353265.2_TthWC1_draft_genome1/ na na na haploid bacteria 2575480 2568128 34.500000 0 61 76 NCBI RefSeq GCF_000353265.2-RS_2026_05_23 2026-05-23 2666 2536 64 23555660 GCF_000353285.1 PRJNA224116 SAMN02261250 ALVM00000000.1 na 272134 1184 Leptolyngbya boryana PCC 6306 strain=PCC 6306 na latest Scaffold Major Full 2013-04-06 ASM35328v1 JGI GCA_000353285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/285/GCF_000353285.1_ASM35328v1/ na assembly from type material na haploid bacteria 7262454 7261054 47.000000 0 5 19 NCBI RefSeq GCF_000353285.1-RS_2025_12_23 2025-12-23 6891 6751 80 23277585 GCF_000353305.2 PRJNA224116 SAMN02415292 APMR00000000.1 na 1192688 28901 Salmonella enterica subsp. enterica serovar Dublin str. UC16 strain=UC16 na latest Scaffold Minor Full 2013-04-09 ASM35330v2 The Genome Institute GCA_000353305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/305/GCF_000353305.2_ASM35330v2/ na na na haploid bacteria 4852028 4851228 52.000000 0 133 173 NCBI RefSeq GCF_000353305.2-RS_2025_02_02 2025-02-02 4806 4517 48 na GCF_000353425.1 PRJNA224116 SAMN02470127 APCD00000000.1 na 1297581 33934 Anoxybacillus flavithermus AK1 strain=AK1 na latest Contig Major Full 2013-04-04 Anoxybacillus flavithermus AK1 King Abdullah University of Science and Technology GCA_000353425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/425/GCF_000353425.1_Anoxybacillus_flavithermus_AK1/ na na na haploid bacteria 2630664 2630664 42.500000 0 50 50 NCBI RefSeq GCF_000353425.1-RS_2026_04_04 2026-04-04 2817 2672 78 26044438 GCF_000353545.1 PRJNA224116 SAMN02472043 AHAU00000000.1 na 1090927 562 Escherichia coli O104:H4 str. E92/11 strain=E92/11 na latest Scaffold Major Full 2013-04-01 E92_11NrN01 Uppsala University GCA_000353545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/545/GCF_000353545.1_E92_11NrN01/ na na na haploid bacteria 5330547 5330547 50.500000 3 167 167 NCBI RefSeq GCF_000353545.1-RS_2025_05_21 2025-05-21 5359 4970 95 23675451 GCF_000353565.1 PRJNA224116 SAMN02470130 APBN00000000.1 na 1300222 45462 Brevibacillus borstelensis AK1 strain=AK1 na latest Contig Major Full 2013-04-04 ASM35356v1 King Abdullah University of Science and Technology GCA_000353565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/565/GCF_000353565.1_ASM35356v1/ na na na haploid bacteria 5155092 5155092 52.000000 0 29 29 NCBI RefSeq GCF_000353565.1-RS_2026_02_15 2026-02-15 5103 4908 146 na GCF_000353585.1 PRJNA224116 SAMN02415238 APWL00000000.1 na 573395 28901 Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 strain=CDC07-0191 na latest Contig Major Full 2013-04-04 S. enterica Tennessee CDC07-0191 Illinois Institute of Technology GCA_000353585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/585/GCF_000353585.1_S._enterica_Tennessee_CDC07-0191/ na na na haploid bacteria 4829379 4829379 52.000000 0 4 4 NCBI RefSeq GCF_000353585.1-RS_2025_04_26 2025-04-26 4687 4444 115 23704182 GCF_000353775.1 PRJNA224116 SAMN02470684 APBH00000000.1 na 1094483 470 Acinetobacter baumannii ABNIH19 strain=ABNIH19 na latest Contig Major Full 2013-04-05 ABNIH19_1 NISC GCA_000353775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/775/GCF_000353775.1_ABNIH19_1/ na na na haploid bacteria 3982334 3982334 39.000000 0 160 160 NCBI RefSeq GCF_000353775.1-RS_2026_02_08 2026-02-08 3931 3674 81 23564252 GCF_000353795.1 PRJNA224116 SAMN02470698 APBJ00000000.1 na 1094486 470 Acinetobacter baumannii ABNIH22 strain=ABNIH22 na latest Contig Major Full 2013-04-05 ABNIH22_1 NISC GCA_000353795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/795/GCF_000353795.1_ABNIH22_1/ na na na haploid bacteria 3941012 3941012 39.000000 0 233 233 NCBI RefSeq GCF_000353795.1-RS_2026_02_08 2026-02-08 3981 3652 91 23564252 GCF_000353815.1 PRJNA224116 SAMN02470691 APBK00000000.1 na 1094487 470 Acinetobacter baumannii ABNIH23 strain=ABNIH23 na latest Contig Major Full 2013-04-05 ABNIH23_1 NISC GCA_000353815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/815/GCF_000353815.1_ABNIH23_1/ na na na haploid bacteria 3925851 3925851 39.000000 0 255 255 NCBI RefSeq GCF_000353815.1-RS_2026_02_09 2026-02-09 3953 3613 85 23564252 GCF_000353835.1 PRJNA224116 SAMN02471792 AORM00000000.1 na 1289590 1491 Clostridium botulinum CB11/1-1 strain=CB11/1-1 na latest Contig Major Full 2013-04-05 ASM35383v1 Institute of Biotechnology, University of Helsinki GCA_000353835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/835/GCF_000353835.1_ASM35383v1/ na na na haploid bacteria 3823307 3823307 27.000000 0 171 171 NCBI RefSeq GCF_000353835.1-RS_2025_06_06 2025-06-06 3544 3408 34 na GCF_000353855.1 PRJNA224116 SAMN02470685 APBB00000000.1 na 1094477 470 Acinetobacter baumannii ABNIH13 strain=ABNIH13 na latest Contig Major Full 2013-04-05 ABNIH13_1 NISC GCA_000353855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/855/GCF_000353855.1_ABNIH13_1/ na na na haploid bacteria 3959486 3959486 39.500000 0 245 245 NCBI RefSeq GCF_000353855.1-RS_2026_02_09 2026-02-09 3989 3641 79 23564252 GCF_000353895.1 PRJNA224116 SAMN02470690 AOGD00000000.1 na 1224166 470 Acinetobacter baumannii ABNIH26 strain=ABNIH26 na latest Contig Major Full 2013-04-05 ABNIH26_1 NISC GCA_000353895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/895/GCF_000353895.1_ABNIH26_1/ na na na haploid bacteria 3937294 3937294 39.000000 0 130 130 NCBI RefSeq GCF_000353895.1-RS_2026_01_31 2026-01-31 3871 3699 71 23564252 GCF_000353915.1 PRJNA224116 SAMN02470689 APBM00000000.1 na 1224165 470 Acinetobacter baumannii ABNIH25 strain=ABNIH25 na latest Contig Major Full 2013-04-05 ABNIH25_1 NISC GCA_000353915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/915/GCF_000353915.1_ABNIH25_1/ na na na haploid bacteria 3900156 3900156 39.000000 0 88 88 NCBI RefSeq GCF_000353915.1-RS_2025_08_18 2025-08-18 3799 3572 69 23564252 GCF_000353975.1 PRJNA224116 SAMN02470696 APAY00000000.1 na 1094471 470 Acinetobacter baumannii ABNIH7 strain=ABNIH7 na latest Contig Major Full 2013-04-05 ABNIH7_1 NISC GCA_000353975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/353/975/GCF_000353975.1_ABNIH7_1/ na na na haploid bacteria 3952619 3952619 39.000000 0 482 482 NCBI RefSeq GCF_000353975.1-RS_2026_02_11 2026-02-11 4132 3674 73 23564252 GCF_000354015.1 PRJNA224116 SAMN02470682 APBA00000000.1 na 1094475 470 Acinetobacter baumannii ABNIH11 strain=ABNIH11 na latest Contig Major Full 2013-04-05 ABNIH11_1 NISC GCA_000354015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/015/GCF_000354015.1_ABNIH11_1/ na na na haploid bacteria 3968178 3968178 39.000000 0 238 238 NCBI RefSeq GCF_000354015.1-RS_2026_02_09 2026-02-09 3972 3656 74 23564252 GCF_000354035.1 PRJNA224116 SAMN02470692 APBC00000000.1 na 1094478 470 Acinetobacter baumannii ABNIH14 strain=ABNIH14 na latest Contig Major Full 2013-04-05 ABNIH14_1 NISC GCA_000354035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/035/GCF_000354035.1_ABNIH14_1/ na na na haploid bacteria 3959924 3959924 39.500000 0 243 243 NCBI RefSeq GCF_000354035.1-RS_2026_02_08 2026-02-08 3991 3693 88 23564252 GCF_000354055.1 PRJNA224116 SAMN02470686 APBD00000000.1 na 1094479 470 Acinetobacter baumannii ABNIH15 strain=ABNIH15 na latest Contig Major Full 2013-04-05 ABNIH15_1 NISC GCA_000354055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/055/GCF_000354055.1_ABNIH15_1/ na na na haploid bacteria 3903614 3903614 39.500000 0 242 242 NCBI RefSeq GCF_000354055.1-RS_2026_02_08 2026-02-08 3904 3601 86 23564252 GCF_000354075.1 PRJNA224116 SAMN02470683 APBE00000000.1 na 1094480 470 Acinetobacter baumannii ABNIH16 strain=ABNIH16 na latest Contig Major Full 2013-04-05 ABNIH16_1 NISC GCA_000354075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/075/GCF_000354075.1_ABNIH16_1/ na na na haploid bacteria 4052044 4052044 39.000000 0 212 212 NCBI RefSeq GCF_000354075.1-RS_2026_02_09 2026-02-09 4112 3766 84 23564252 GCF_000354095.1 PRJNA224116 SAMN02470687 APBF00000000.1 na 1094481 470 Acinetobacter baumannii ABNIH17 strain=ABNIH17 na latest Contig Major Full 2013-04-05 ABNIH17_1 NISC GCA_000354095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/095/GCF_000354095.1_ABNIH17_1/ na na na haploid bacteria 4001250 4001250 39.500000 0 306 306 NCBI RefSeq GCF_000354095.1-RS_2025_09_10 2025-09-10 4044 3712 79 23564252 GCF_000354115.1 PRJNA224116 SAMN02470697 APBG00000000.1 na 1094482 470 Acinetobacter baumannii ABNIH18 strain=ABNIH18 na latest Contig Major Full 2013-04-05 ABNIH18_1 NISC GCA_000354115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/115/GCF_000354115.1_ABNIH18_1/ na na na haploid bacteria 3971802 3971802 39.000000 0 188 188 NCBI RefSeq GCF_000354115.1-RS_2026_02_08 2026-02-08 3934 3663 82 23564252 GCF_000354135.1 PRJNA224116 SAMN02470693 APBI00000000.1 na 1094484 470 Acinetobacter baumannii ABNIH20 strain=ABNIH20 na latest Contig Major Full 2013-04-05 ABNIH20_1 NISC GCA_000354135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/135/GCF_000354135.1_ABNIH20_1/ na na na haploid bacteria 3893581 3893581 39.500000 0 345 345 NCBI RefSeq GCF_000354135.1-RS_2026_02_09 2026-02-09 3940 3555 80 23564252 GCF_000354155.1 PRJNA224116 SAMN02470688 APBL00000000.1 na 1094488 470 Acinetobacter baumannii ABNIH24 strain=ABNIH24 na latest Contig Major Full 2013-04-05 ABNIH24_1 NISC GCA_000354155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/155/GCF_000354155.1_ABNIH24_1/ na na na haploid bacteria 3841535 3841535 39.500000 0 379 379 NCBI RefSeq GCF_000354155.1-RS_2026_02_09 2026-02-09 3888 3526 82 23564252 GCF_000354175.2 PRJNA224116 SAMN02603463 na na 1219076 663 Vibrio alginolyticus NBRC 15630 = ATCC 17749 strain=ATCC 17749 na latest Complete Genome Major Full 2013-09-10 ASM35417v2 Jinan Military General Hospital GCA_000354175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/175/GCF_000354175.2_ASM35417v2/ na assembly from type material na haploid bacteria 5146637 5146637 44.500000 2 2 2 NCBI RefSeq GCF_000354175.2-RS_2025_12_20 2025-12-20 4662 4471 143 25635021 GCF_000354275.2 PRJNA224116 SAMN00829285 AQDB00000000.1 na 1116035 562 Escherichia coli 2875000 strain=2875000 na latest Contig Minor Full 2013-04-06 ASM35427v2 IGS GCA_000354275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/275/GCF_000354275.2_ASM35427v2/ na na na haploid bacteria 5053177 5053177 50.500000 0 123 123 NCBI RefSeq GCF_000354275.2-RS_2025_06_17 2025-06-17 5139 4748 115 na GCF_000354295.1 PRJNA224116 SAMN00829290 AQDA00000000.1 na 1116112 562 Escherichia coli BCE002_MS12 strain=BCE002_MS12 na latest Contig Major Full 2013-04-06 ASM35429v1 IGS GCA_000354295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/295/GCF_000354295.1_ASM35429v1/ na na na haploid bacteria 4946441 4946441 50.500000 0 97 97 NCBI RefSeq GCF_000354295.1-RS_2025_08_11 2025-08-11 4936 4636 117 na GCF_000354315.2 PRJNA224116 SAMN00829294 AQCZ00000000.1 na 1116115 562 Escherichia coli BCE019_MS-13 strain=BCE019_MS-13 na latest Contig Minor Full 2013-04-06 ASM35431v2 IGS GCA_000354315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/315/GCF_000354315.2_ASM35431v2/ na na na haploid bacteria 5057731 5057731 50.500000 0 197 197 NCBI RefSeq GCF_000354315.2-RS_2025_06_16 2025-06-16 5294 4694 113 na GCF_000354335.2 PRJNA224116 SAMN00829295 AQCY00000000.1 na 1116118 562 Escherichia coli BCE034_MS-14 strain=BCE034_MS-14 na latest Contig Minor Full 2013-04-06 ASM35433v2 IGS GCA_000354335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/335/GCF_000354335.2_ASM35433v2/ na na na haploid bacteria 5291806 5291806 50.500000 0 160 160 NCBI RefSeq GCF_000354335.2-RS_2025_06_17 2025-06-17 5433 4949 116 na GCF_000354355.2 PRJNA224116 SAMN00829298 AQCX00000000.1 na 1116002 562 Escherichia coli C-34666 strain=C-34666 na latest Contig Minor Full 2013-04-06 ASM35435v2 IGS GCA_000354355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/355/GCF_000354355.2_ASM35435v2/ na na na haploid bacteria 5367194 5367194 50.500000 0 198 198 NCBI RefSeq GCF_000354355.2-RS_2025_06_17 2025-06-17 5606 5091 115 na GCF_000354375.2 PRJNA224116 SAMN00829301 AQCW00000000.1 na 1116064 562 Escherichia coli MP021017.10 strain=MP021017.10 na latest Contig Minor Full 2013-04-06 ASM35437v2 IGS GCA_000354375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/375/GCF_000354375.2_ASM35437v2/ na na na haploid bacteria 4940249 4940249 50.500000 0 171 171 NCBI RefSeq GCF_000354375.2-RS_2025_06_16 2025-06-16 5116 4613 108 na GCF_000354395.1 PRJNA224116 SAMN00829305 AQCU00000000.1 na 1116111 562 Escherichia coli MP021017.12 strain=MP021017.12 na latest Contig Major Full 2013-04-06 ASM35439v1 IGS GCA_000354395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/395/GCF_000354395.1_ASM35439v1/ na na na haploid bacteria 4874586 4874586 50.500000 0 470 470 NCBI RefSeq GCF_000354395.1-RS_2025_08_11 2025-08-11 5172 4580 112 na GCF_000354415.2 PRJNA224116 SAMN00829303 AQCV00000000.1 na 1116065 562 Escherichia coli MP021017.11 strain=MP021017.11 na latest Contig Minor Full 2013-04-06 ASM35441v2 IGS GCA_000354415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/415/GCF_000354415.2_ASM35441v2/ na na na haploid bacteria 4924469 4924469 50.500000 0 155 155 NCBI RefSeq GCF_000354415.2-RS_2025_06_15 2025-06-15 5075 4586 103 na GCF_000354435.2 PRJNA224116 SAMN00829307 AQCT00000000.1 na 1116058 562 Escherichia coli MP021017.2 strain=MP021017.2 na latest Contig Minor Full 2013-04-06 ASM35443v2 IGS GCA_000354435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/435/GCF_000354435.2_ASM35443v2/ na na na haploid bacteria 4951917 4951917 50.500000 0 154 154 NCBI RefSeq GCF_000354435.2-RS_2025_06_17 2025-06-17 5103 4577 114 na GCF_000354455.1 PRJNA224116 SAMN00829280 AQDC00000000.1 na 1116034 562 Escherichia coli 2872800 strain=2872800 na latest Contig Major Full 2013-04-06 ASM35445v1 IGS GCA_000354455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/455/GCF_000354455.1_ASM35445v1/ na na na haploid bacteria 5054520 5054520 50.500000 0 111 111 NCBI RefSeq GCF_000354455.1-RS_2025_08_10 2025-08-10 5126 4735 107 na GCF_000354475.2 PRJNA224116 SAMN00829306 AQCS00000000.1 na 1116059 562 Escherichia coli MP021017.3 strain=MP021017.3 na latest Contig Minor Full 2013-04-06 ASM35447v2 IGS GCA_000354475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/475/GCF_000354475.2_ASM35447v2/ na na na haploid bacteria 4935705 4935705 50.500000 0 138 138 NCBI RefSeq GCF_000354475.2-RS_2025_06_17 2025-06-17 5082 4633 108 na GCF_000354495.2 PRJNA224116 SAMN00829308 AQCR00000000.1 na 1116060 562 Escherichia coli MP021017.4 strain=MP021017.4 na latest Contig Minor Full 2013-04-06 ASM35449v2 IGS GCA_000354495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/495/GCF_000354495.2_ASM35449v2/ na na na haploid bacteria 4961453 4961453 50.500000 0 155 155 NCBI RefSeq GCF_000354495.2-RS_2025_06_15 2025-06-15 5100 4589 107 na GCF_000354515.2 PRJNA224116 SAMN00829316 AQCQ00000000.1 na 1116061 562 Escherichia coli MP021017.5 strain=MP021017.5 na latest Contig Minor Full 2013-04-06 ASM35451v2 IGS GCA_000354515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/515/GCF_000354515.2_ASM35451v2/ na na na haploid bacteria 4938416 4938416 50.500000 0 136 136 NCBI RefSeq GCF_000354515.2-RS_2025_06_15 2025-06-15 5078 4611 109 na GCF_000354535.2 PRJNA224116 SAMN00829315 AQCP00000000.1 na 1116062 562 Escherichia coli MP021017.6 strain=MP021017.6 na latest Contig Minor Full 2013-04-06 ASM35453v2 IGS GCA_000354535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/535/GCF_000354535.2_ASM35453v2/ na na na haploid bacteria 4931432 4931432 50.500000 0 147 147 NCBI RefSeq GCF_000354535.2-RS_2025_06_15 2025-06-15 5071 4602 104 na GCF_000354555.2 PRJNA224116 SAMN00829318 AQCO00000000.1 na 1116063 562 Escherichia coli MP021017.9 strain=MP021017.9 na latest Contig Minor Full 2013-04-06 ASM35455v2 IGS GCA_000354555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/555/GCF_000354555.2_ASM35455v2/ na na na haploid bacteria 4935764 4935764 50.500000 0 139 139 NCBI RefSeq GCF_000354555.2-RS_2025_06_16 2025-06-16 5078 4599 112 na GCF_000354575.2 PRJNA224116 SAMN00829322 AQCN00000000.1 na 1116134 562 Escherichia coli MP021552.11 strain=MP021552.11 na latest Contig Minor Full 2013-04-06 ASM35457v2 IGS GCA_000354575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/575/GCF_000354575.2_ASM35457v2/ na na na haploid bacteria 5082443 5082443 50.500000 0 211 211 NCBI RefSeq GCF_000354575.2-RS_2025_06_15 2025-06-15 5192 4761 111 na GCF_000354595.1 PRJNA224116 SAMN00829323 AQCM00000000.1 na 1116135 562 Escherichia coli MP021552.12 strain=MP021552.12 na latest Contig Major Full 2013-04-06 ASM35459v1 IGS GCA_000354595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/595/GCF_000354595.1_ASM35459v1/ na na na haploid bacteria 5440529 5440529 50.500000 0 233 233 NCBI RefSeq GCF_000354595.1-RS_2025_09_28 2025-09-28 5691 5131 114 na GCF_000354615.2 PRJNA224116 SAMN00829324 AQCL00000000.1 na 1116132 562 Escherichia coli MP021552.7 strain=MP021552.7 na latest Contig Minor Full 2013-04-06 ASM35461v2 IGS GCA_000354615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/615/GCF_000354615.2_ASM35461v2/ na na na haploid bacteria 5410310 5410310 50.500000 0 258 258 NCBI RefSeq GCF_000354615.2-RS_2025_06_15 2025-06-15 5684 5118 114 na GCF_000354735.2 PRJNA224116 SAMN00829334 AQEW00000000.1 na 1116133 562 Escherichia coli MP021552.8 strain=MP021552.8 na latest Contig Minor Full 2013-04-06 ASM35473v2 IGS GCA_000354735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/735/GCF_000354735.2_ASM35473v2/ na na na haploid bacteria 5628041 5628041 50.500000 0 71 71 NCBI RefSeq GCF_000354735.2-RS_2025_06_17 2025-06-17 5816 5259 137 na GCF_000354755.2 PRJNA224116 SAMN00829281 AQDG00000000.1 na 1116030 562 Escherichia coli 2866750 strain=2866750 na latest Contig Minor Full 2013-04-06 ASM35475v2 IGS GCA_000354755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/755/GCF_000354755.2_ASM35475v2/ na na na haploid bacteria 5164109 5164109 50.500000 0 126 126 NCBI RefSeq GCF_000354755.2-RS_2025_06_15 2025-06-15 5291 4915 107 na GCF_000354775.2 PRJNA224116 SAMN00829250 AQEA00000000.1 na 1116010 562 Escherichia coli 2747800 strain=2747800 na latest Contig Minor Full 2013-04-06 ASM35477v2 IGS GCA_000354775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/775/GCF_000354775.2_ASM35477v2/ na na na haploid bacteria 5166192 5166192 50.500000 0 171 171 NCBI RefSeq GCF_000354775.2-RS_2025_06_16 2025-06-16 5324 4898 111 na GCF_000354795.2 PRJNA224116 SAMN00829335 AQEV00000000.1 na 1116136 562 Escherichia coli MP021561.2 strain=MP021561.2 na latest Contig Minor Full 2013-04-06 ASM35479v2 IGS GCA_000354795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/795/GCF_000354795.2_ASM35479v2/ na na na haploid bacteria 5367395 5367395 50.500000 0 35 35 NCBI RefSeq GCF_000354795.2-RS_2025_06_15 2025-06-15 5345 4963 120 na GCF_000354815.2 PRJNA224116 SAMN00829283 AQDF00000000.1 na 1116031 562 Escherichia coli 2867750 strain=2867750 na latest Contig Minor Full 2013-04-06 ASM35481v2 IGS GCA_000354815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/815/GCF_000354815.2_ASM35481v2/ na na na haploid bacteria 5093471 5093471 50.500000 0 135 135 NCBI RefSeq GCF_000354815.2-RS_2025_06_15 2025-06-15 5209 4792 116 na GCF_000354835.2 PRJNA224116 SAMN00829234 AQEG00000000.1 na 1116105 562 Escherichia coli 180600 strain=180600 na latest Contig Minor Full 2013-04-06 ASM35483v2 IGS GCA_000354835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/835/GCF_000354835.2_ASM35483v2/ na na na haploid bacteria 5073923 5073923 50.500000 0 149 149 NCBI RefSeq GCF_000354835.2-RS_2025_06_15 2025-06-15 5157 4766 107 na GCF_000354855.1 PRJNA224116 SAMN00829337 AQEU00000000.1 na 1116138 562 Escherichia coli MP021566.1 strain=MP021566.1 na latest Contig Major Full 2013-04-06 ASM35485v1 IGS GCA_000354855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/855/GCF_000354855.1_ASM35485v1/ na na na haploid bacteria 5016401 5016401 50.500000 0 33 33 NCBI RefSeq GCF_000354855.1-RS_2025_06_14 2025-06-14 5035 4511 136 na GCF_000354875.1 PRJNA224116 SAMN00829264 AQDZ00000000.1 na 1116011 562 Escherichia coli 2749250 strain=2749250 na latest Contig Major Full 2013-04-06 ASM35487v1 IGS GCA_000354875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/875/GCF_000354875.1_ASM35487v1/ na na na haploid bacteria 5125700 5125700 50.500000 0 178 178 NCBI RefSeq GCF_000354875.1-RS_2025_08_11 2025-08-11 5263 4849 111 na GCF_000354895.2 PRJNA224116 SAMN00829263 AQEB00000000.1 na 1116007 562 Escherichia coli 2731150 strain=2731150 na latest Contig Minor Full 2013-04-06 ASM35489v2 IGS GCA_000354895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/895/GCF_000354895.2_ASM35489v2/ na na na haploid bacteria 5142363 5142363 50.500000 0 198 198 NCBI RefSeq GCF_000354895.2-RS_2025_06_15 2025-06-15 5391 4887 120 na GCF_000354915.1 PRJNA224116 SAMN00858074 AQEI00000000.1 na 1125634 562 Escherichia coli 174750 strain=174750 na latest Contig Major Full 2013-04-06 ASM35491v1 IGS GCA_000354915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/915/GCF_000354915.1_ASM35491v1/ na na na haploid bacteria 5283271 5283271 50.500000 0 311 311 NCBI RefSeq GCF_000354915.1-RS_2025_06_13 2025-06-13 5398 4941 99 na GCF_000354935.2 PRJNA224116 SAMN00829278 AQDI00000000.1 na 1116028 562 Escherichia coli 2866450 strain=2866450 na latest Contig Minor Full 2013-04-06 ASM35493v2 IGS GCA_000354935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/935/GCF_000354935.2_ASM35493v2/ na na na haploid bacteria 5084030 5084030 50.500000 0 124 124 NCBI RefSeq GCF_000354935.2-RS_2025_06_15 2025-06-15 5162 4793 110 na GCF_000354955.1 PRJNA224116 SAMN00829279 AQDH00000000.1 na 1116029 562 Escherichia coli 2866550 strain=2866550 na latest Contig Major Full 2013-04-06 ASM35495v1 IGS GCA_000354955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/955/GCF_000354955.1_ASM35495v1/ na na na haploid bacteria 5104704 5104704 50.500000 0 130 130 NCBI RefSeq GCF_000354955.1-RS_2025_08_12 2025-08-12 5196 4795 109 na GCF_000354975.1 PRJNA224116 SAMN00829276 AQDJ00000000.1 na 1116026 562 Escherichia coli 2865200 strain=2865200 na latest Contig Major Full 2013-04-06 ASM35497v1 IGS GCA_000354975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/975/GCF_000354975.1_ASM35497v1/ na na na haploid bacteria 5305549 5305549 50.500000 0 171 171 NCBI RefSeq GCF_000354975.1-RS_2025_08_18 2025-08-18 5388 4953 121 na GCF_000354995.2 PRJNA224116 SAMN00829271 AQDL00000000.1 na 1116021 562 Escherichia coli 2860050 strain=2860050 na latest Contig Minor Full 2013-04-06 ASM35499v2 IGS GCA_000354995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/354/995/GCF_000354995.2_ASM35499v2/ na na na haploid bacteria 5129457 5129457 50.500000 0 184 184 NCBI RefSeq GCF_000354995.2-RS_2025_06_15 2025-06-15 5259 4841 116 na GCF_000355015.2 PRJNA224116 SAMN00829267 AQDN00000000.1 na 1116128 562 Escherichia coli 2851500 strain=2851500 na latest Contig Minor Full 2013-04-06 ASM35501v2 IGS GCA_000355015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/015/GCF_000355015.2_ASM35501v2/ na na na haploid bacteria 5044264 5044264 50.500000 0 109 109 NCBI RefSeq GCF_000355015.2-RS_2025_06_15 2025-06-15 5097 4743 105 na GCF_000355035.2 PRJNA224116 SAMN00829274 AQDK00000000.1 na 1116023 562 Escherichia coli 2861200 strain=2861200 na latest Contig Minor Full 2013-04-06 ASM35503v2 IGS GCA_000355035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/035/GCF_000355035.2_ASM35503v2/ na na na haploid bacteria 4974499 4974499 50.500000 0 160 160 NCBI RefSeq GCF_000355035.2-RS_2025_06_15 2025-06-15 5134 4633 108 na GCF_000355055.1 PRJNA224116 SAMN00829269 AQDP00000000.1 na 1116018 562 Escherichia coli 2850400 strain=2850400 na latest Contig Major Full 2013-04-06 ASM35505v1 IGS GCA_000355055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/055/GCF_000355055.1_ASM35505v1/ na na na haploid bacteria 5070534 5070534 50.500000 0 117 117 NCBI RefSeq GCF_000355055.1-RS_2025_08_12 2025-08-12 5148 4772 111 na GCF_000355075.2 PRJNA224116 SAMN00829419 AQEO00000000.1 na 1116153 562 Escherichia coli P0302308.1 strain=P0302308.1 na latest Contig Minor Full 2013-04-06 ASM35507v2 IGS GCA_000355075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/075/GCF_000355075.2_ASM35507v2/ na na na haploid bacteria 5184395 5184395 50.500000 0 43 43 NCBI RefSeq GCF_000355075.2-RS_2025_06_15 2025-06-15 5152 4791 126 na GCF_000355095.2 PRJNA224116 SAMN00829433 AQEN00000000.1 na 1116163 562 Escherichia coli P0304777.1 strain=P0304777.1 na latest Contig Minor Full 2013-04-06 ASM35509v2 IGS GCA_000355095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/095/GCF_000355095.2_ASM35509v2/ na na na haploid bacteria 5191608 5191608 51.000000 0 38 38 NCBI RefSeq GCF_000355095.2-RS_2025_06_15 2025-06-15 5146 4759 136 na GCF_000355115.2 PRJNA224116 SAMN00829549 AQEJ00000000.1 na 1116001 562 Escherichia coli ThroopD strain=ThroopD na latest Contig Minor Full 2013-04-06 ASM35511v2 IGS GCA_000355115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/115/GCF_000355115.2_ASM35511v2/ na na na haploid bacteria 5419229 5419229 50.500000 0 42 42 NCBI RefSeq GCF_000355115.2-RS_2025_06_15 2025-06-15 5454 4928 134 na GCF_000355135.1 PRJNA224116 SAMN01994529 AQCK00000000.1 na 1303729 174 Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee strain=Sponselee na latest Contig Major Full 2013-04-06 CA_glsol077 J. Craig Venter Institute GCA_000355135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/135/GCF_000355135.1_CA_glsol077/ na na na haploid bacteria 3755643 3755643 40.000000 0 187 187 NCBI RefSeq GCF_000355135.1-RS_2025_12_22 2025-12-22 3414 2900 44 na GCF_000355155.2 PRJNA224116 SAMN00829228 AQFG00000000.1 na 1116119 562 Escherichia coli 2719100 strain=2719100 na latest Contig Minor Full 2013-04-06 ASM35515v2 IGS GCA_000355155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/155/GCF_000355155.2_ASM35515v2/ na na na haploid bacteria 5283174 5283174 51.000000 0 33 33 NCBI RefSeq GCF_000355155.2-RS_2025_06_17 2025-06-17 5248 4775 122 na GCF_000355175.1 PRJNA224116 SAMN00829230 AQFF00000000.1 na 1116120 562 Escherichia coli 2720900 strain=2720900 na latest Contig Major Full 2013-04-06 ASM35517v1 IGS GCA_000355175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/175/GCF_000355175.1_ASM35517v1/ na na na haploid bacteria 5422182 5422182 50.500000 0 50 50 NCBI RefSeq GCF_000355175.1-RS_2025_06_13 2025-06-13 5398 4955 141 na GCF_000355195.2 PRJNA224116 SAMN00829717 AQFD00000000.1 na 1115998 562 Escherichia coli Envira 10/1 strain=Envira 10/1 na latest Contig Minor Full 2013-04-06 ASM35519v2 IGS GCA_000355195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/195/GCF_000355195.2_ASM35519v2/ na na na haploid bacteria 5403567 5403567 50.500000 0 50 50 NCBI RefSeq GCF_000355195.2-RS_2025_06_16 2025-06-16 5439 4982 141 na GCF_000355215.2 PRJNA224116 SAMN00829025 AQFC00000000.1 na 1115997 562 Escherichia coli Envira 8/11 strain=Envira 8/11 na latest Contig Minor Full 2013-04-06 ASM35521v2 IGS GCA_000355215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/215/GCF_000355215.2_ASM35521v2/ na na na haploid bacteria 5462017 5462017 50.500000 0 62 62 NCBI RefSeq GCF_000355215.2-RS_2025_06_17 2025-06-17 5504 5057 131 na GCF_000355235.2 PRJNA224116 SAMN00829297 AQFB00000000.1 na 1115999 562 Escherichia coli Jurua 18/11 strain=Jurua 18/11 na latest Contig Minor Full 2013-04-06 ASM35523v2 IGS GCA_000355235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/235/GCF_000355235.2_ASM35523v2/ na na na haploid bacteria 5194072 5194072 50.500000 0 30 30 NCBI RefSeq GCF_000355235.2-RS_2025_06_16 2025-06-16 5140 4794 113 na GCF_000355255.2 PRJNA224116 SAMN00829299 AQFA00000000.1 na 1116000 562 Escherichia coli Jurua 20/10 strain=Jurua 20/10 na latest Contig Minor Full 2013-04-06 ASM35525v2 IGS GCA_000355255.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/255/GCF_000355255.2_ASM35525v2/ na na na haploid bacteria 5160271 5160271 50.500000 0 56 56 NCBI RefSeq GCF_000355255.2-RS_2025_06_15 2025-06-15 5136 4756 116 na GCF_000355275.2 PRJNA224116 SAMN00829300 AQEZ00000000.1 na 1116140 562 Escherichia coli MP020940.1 strain=MP020940.1 na latest Contig Minor Full 2013-04-06 ASM35527v2 IGS GCA_000355275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/275/GCF_000355275.2_ASM35527v2/ na na na haploid bacteria 5250942 5250942 50.500000 0 55 55 NCBI RefSeq GCF_000355275.2-RS_2024_06_12 2024-06-12 5237 4841 116 na GCF_000355295.1 PRJNA224116 SAMN00829302 AQEY00000000.1 na 1116139 562 Escherichia coli MP020980.2 strain=MP020980.2 na latest Contig Major Full 2013-04-06 ASM35529v1 IGS GCA_000355295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/295/GCF_000355295.1_ASM35529v1/ na na na haploid bacteria 5483164 5483164 50.500000 0 51 51 NCBI RefSeq GCF_000355295.1-RS_2025_06_13 2025-06-13 5492 5107 134 na GCF_000355315.2 PRJNA224116 SAMN00829372 AQEQ00000000.1 na 1116066 562 Escherichia coli P0301867.1 strain=P0301867.1 na latest Contig Minor Full 2013-04-06 ASM35531v2 IGS GCA_000355315.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/315/GCF_000355315.2_ASM35531v2/ na na na haploid bacteria 5346948 5346948 51.000000 0 34 34 NCBI RefSeq GCF_000355315.2-RS_2025_06_17 2025-06-17 5338 4842 133 na GCF_000355335.2 PRJNA224116 SAMN00829268 AQDO00000000.1 na 1116019 562 Escherichia coli 2850750 strain=2850750 na latest Contig Minor Full 2013-04-06 ASM35533v2 IGS GCA_000355335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/335/GCF_000355335.2_ASM35533v2/ na na na haploid bacteria 5099182 5099182 50.500000 0 126 126 NCBI RefSeq GCF_000355335.2-RS_2025_06_17 2025-06-17 5181 4782 110 na GCF_000355355.1 PRJNA224116 SAMN00829270 AQDM00000000.1 na 1116020 562 Escherichia coli 2853500 strain=2853500 na latest Contig Major Full 2013-04-06 ASM35535v1 IGS GCA_000355355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/355/GCF_000355355.1_ASM35535v1/ na na na haploid bacteria 5079247 5079247 50.500000 0 128 128 NCBI RefSeq GCF_000355355.1-RS_2025_08_11 2025-08-11 5167 4771 116 na GCF_000355375.2 PRJNA224116 SAMN00829266 AQDQ00000000.1 na 1116127 562 Escherichia coli 2848050 strain=2848050 na latest Contig Minor Full 2013-04-06 ASM35537v2 IGS GCA_000355375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/375/GCF_000355375.2_ASM35537v2/ na na na haploid bacteria 5118991 5118991 50.500000 0 147 147 NCBI RefSeq GCF_000355375.2-RS_2025_06_17 2025-06-17 5283 4836 115 na GCF_000355395.2 PRJNA224116 SAMN00829251 AQDY00000000.1 na 1116012 562 Escherichia coli 2756500 strain=2756500 na latest Contig Minor Full 2013-04-06 ASM35539v2 IGS GCA_000355395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/395/GCF_000355395.2_ASM35539v2/ na na na haploid bacteria 5146877 5146877 50.500000 0 187 187 NCBI RefSeq GCF_000355395.2-RS_2025_06_17 2025-06-17 5304 4909 98 na GCF_000355415.2 PRJNA224116 SAMN00829255 AQDS00000000.1 na 1116124 562 Escherichia coli 2845350 strain=2845350 na latest Contig Minor Full 2013-04-06 ASM35541v2 IGS GCA_000355415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/415/GCF_000355415.2_ASM35541v2/ na na na haploid bacteria 4961746 4961746 50.500000 0 171 171 NCBI RefSeq GCF_000355415.2-RS_2025_06_15 2025-06-15 5164 4645 120 na GCF_000355435.2 PRJNA224116 SAMN00829261 AQDR00000000.1 na 1116125 562 Escherichia coli 2845650 strain=2845650 na latest Contig Minor Full 2013-04-06 ASM35543v2 IGS GCA_000355435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/435/GCF_000355435.2_ASM35543v2/ na na na haploid bacteria 5209270 5209270 50.500000 0 119 119 NCBI RefSeq GCF_000355435.2-RS_2025_06_15 2025-06-15 5217 4811 122 na GCF_000355455.2 PRJNA224116 SAMN00829282 AQDE00000000.1 na 1116032 562 Escherichia coli 2871950 strain=2871950 na latest Contig Minor Full 2013-04-06 ASM35545v2 IGS GCA_000355455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/455/GCF_000355455.2_ASM35545v2/ na na na haploid bacteria 5072829 5072829 50.500000 0 195 195 NCBI RefSeq GCF_000355455.2-RS_2025_06_15 2025-06-15 5319 4719 109 na GCF_000355475.2 PRJNA224116 SAMN00829284 AQDD00000000.1 na 1116033 562 Escherichia coli 2872000 strain=2872000 na latest Contig Minor Full 2013-04-06 ASM35547v2 IGS GCA_000355475.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/475/GCF_000355475.2_ASM35547v2/ na na na haploid bacteria 5154088 5154088 50.500000 0 201 201 NCBI RefSeq GCF_000355475.2-RS_2025_06_15 2025-06-15 5404 4766 115 na GCF_000355495.2 PRJNA224116 SAMN00829287 AQFK00000000.1 na 1116037 562 Escherichia coli BCE001_MS16 strain=BCE001_MS16 na latest Contig Minor Full 2013-04-06 ASM35549v2 IGS GCA_000355495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/495/GCF_000355495.2_ASM35549v2/ na na na haploid bacteria 4993441 4993441 50.500000 0 21 21 NCBI RefSeq GCF_000355495.2-RS_2025_06_17 2025-06-17 4882 4595 132 na GCF_000355515.2 PRJNA224116 SAMN00829304 AQEX00000000.1 na 1116057 562 Escherichia coli MP021017.1 strain=MP021017.1 na latest Contig Minor Full 2013-04-06 ASM35551v2 IGS GCA_000355515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/515/GCF_000355515.2_ASM35551v2/ na na na haploid bacteria 5021121 5021121 50.500000 0 34 34 NCBI RefSeq GCF_000355515.2-RS_2025_06_17 2025-06-17 5052 4598 137 na GCF_000355535.1 PRJNA224116 SAMN00829258 AQDX00000000.1 na 1116013 562 Escherichia coli 2762100 strain=2762100 na latest Contig Major Full 2013-04-06 ASM35553v1 IGS GCA_000355535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/535/GCF_000355535.1_ASM35553v1/ na na na haploid bacteria 5163730 5163730 50.500000 0 198 198 NCBI RefSeq GCF_000355535.1-RS_2025_08_12 2025-08-12 5383 4800 110 na GCF_000355555.2 PRJNA224116 SAMN00829256 AQDV00000000.1 na 1116015 562 Escherichia coli 2780750 strain=2780750 na latest Contig Minor Full 2013-04-06 ASM35555v2 IGS GCA_000355555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/555/GCF_000355555.2_ASM35555v2/ na na na haploid bacteria 5239961 5239961 50.500000 0 129 129 NCBI RefSeq GCF_000355555.2-RS_2025_06_17 2025-06-17 5232 4882 122 na GCF_000355575.2 PRJNA224116 SAMN00829254 AQDU00000000.1 na 1116016 562 Escherichia coli 2785200 strain=2785200 na latest Contig Minor Full 2013-04-06 ASM35557v2 IGS GCA_000355575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/575/GCF_000355575.2_ASM35557v2/ na na na haploid bacteria 5094577 5094577 50.500000 0 148 148 NCBI RefSeq GCF_000355575.2-RS_2025_06_17 2025-06-17 5136 4703 114 na GCF_000355595.1 PRJNA224116 SAMN00829259 AQDT00000000.1 na 1116017 562 Escherichia coli 2788150 strain=2788150 na latest Contig Major Full 2013-04-06 ASM35559v1 IGS GCA_000355595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/595/GCF_000355595.1_ASM35559v1/ na na na haploid bacteria 5328058 5328058 50.500000 0 185 185 NCBI RefSeq GCF_000355595.1-RS_2025_08_18 2025-08-18 5506 5041 114 na GCF_000355615.2 PRJNA224116 SAMN00829253 AQDW00000000.1 na 1116014 562 Escherichia coli 2770900 strain=2770900 na latest Contig Minor Full 2013-04-06 ASM35561v2 IGS GCA_000355615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/615/GCF_000355615.2_ASM35561v2/ na na na haploid bacteria 5058772 5058772 50.500000 0 144 144 NCBI RefSeq GCF_000355615.2-RS_2025_06_17 2025-06-17 5172 4744 120 na GCF_000355635.2 PRJNA224116 SAMN02469645 APMC00000000.2 na 1306948 56448 Xanthomonas arboricola pv. corylina str. NCCB 100457 strain=NCCB 100457 na latest Contig Major Full 2013-05-24 XanArbCorV02 Colorado State University GCA_000355635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/635/GCF_000355635.2_XanArbCorV02/ na na na haploid bacteria 5226578 5226578 65.500000 0 281 281 NCBI RefSeq GCF_000355635.2-RS_2026_05_13 2026-05-13 4557 4273 96 23704178 GCF_000355675.1 PRJNA224116 SAMEA2272589 na reference genome 1298593 187493 Thalassolituus oleivorans MIL-1 strain=MIL-1 na latest Complete Genome Major Full 2013-03-14 ASM35567v1 MPI BREMEN GCA_000355675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/675/GCF_000355675.1_ASM35567v1/ na assembly from type material na haploid bacteria 3920328 3920328 46.500000 1 1 1 NCBI RefSeq GCF_000355675.1-RS_2026_03_30 2026-03-30 3612 3525 67 23599290 GCF_000355695.1 PRJNA224116 SAMEA2271949 na reference genome 1097677 31963 Clavibacter nebraskensis NCPPB 2581 strain=type strain: NCPPB 2581 na latest Complete Genome Major Full 2013-04-01 ASM35569v1 Department of Microbiology, University of Bielefeld GCA_000355695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/695/GCF_000355695.1_ASM35569v1/ na assembly from type material na haploid bacteria 3063596 3063596 73.000000 1 1 1 NCBI RefSeq GCF_000355695.1-RS_2025_08_25 2025-08-25 2953 2874 54 na GCF_000355725.1 PRJNA224116 SAMEA2272195 CALM00000000.1 na 1118157 40324 Stenotrophomonas maltophilia RA8 strain=RA8 na latest Contig Major Full 2013-04-03 ASM35572v1 Karlsruhe Institue of Technology - Institue of functional Interfaces GCA_000355725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/725/GCF_000355725.1_ASM35572v1/ na na na haploid bacteria 4851447 4851447 65.500000 0 1363 1363 NCBI RefSeq GCF_000355725.1-RS_2025_05_20 2025-05-20 4949 4601 74 na GCF_000355765.4 PRJNA224116 SAMEA2272307 na reference genome 1288494 1288494 Nitrosospira lacus strain=APG3 na latest Complete Genome Major Full 2017-07-17 ASM35576v4 MDA GCA_000355765.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/765/GCF_000355765.4_ASM35576v4/ na assembly from type material na haploid bacteria 3261088 3261088 53.500000 1 1 1 NCBI RefSeq GCF_000355765.4-RS_2026_03_05 2026-03-05 2935 2863 50 25336720 GCF_000355785.1 PRJNA224116 SAMN02469601 APKZ00000000.1 na 1306409 1492 Clostridium butyricum DKU-01 strain=DKU-01 na latest Contig Major Full 2013-04-05 CloButy1.0 Chunlab, Inc. GCA_000355785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/785/GCF_000355785.1_CloButy1.0/ na na na haploid bacteria 4519722 4519722 28.500000 0 79 79 NCBI RefSeq GCF_000355785.1-RS_2026_04_23 2026-04-23 4093 3948 80 25861391 GCF_000355805.1 PRJNA224116 SAMN02469890 ANPJ00000000.1 na 1239415 1239415 Dokdonia sp. PRO95 strain=PRO95 na latest Chromosome Major Full 2013-04-19 ASM35580v1 Helmholtz-Centre for Infection Research GCA_000355805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/805/GCF_000355805.1_ASM35580v1/ na na na haploid bacteria 3305193 3303993 37.500000 1 1 12 NCBI RefSeq GCF_000355805.1-RS_2024_05_07 2024-05-07 2995 2937 41 23526944 GCF_000355825.1 PRJNA224116 SAMN02471150 APNP00000000.1 na 1295394 197 Campylobacter jejuni subsp. jejuni ICDCCJ07002 strain=ICDCCJ07002 na latest Scaffold Major Full 2013-04-09 ICDCCJ07002 National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention GCA_000355825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/825/GCF_000355825.1_ICDCCJ07002/ na na na haploid bacteria 1698407 1694682 30.500000 0 7 14 NCBI RefSeq GCF_000355825.1-RS_2025_06_29 2025-06-29 1763 1661 42 23704181 GCF_000355845.1 PRJNA224116 SAMN02471149 APNQ00000000.1 na 1295400 197 Campylobacter jejuni subsp. jejuni ICDCCJ07004 strain=ICDCCJ07004 na latest Scaffold Major Full 2013-04-09 ICDCCJ07004 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000355845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/845/GCF_000355845.1_ICDCCJ07004/ na na na haploid bacteria 1697084 1695092 30.500000 0 57 73 NCBI RefSeq GCF_000355845.1-RS_2025_06_28 2025-06-28 1774 1664 45 26197476 GCF_000355905.1 PRJNA224116 SAMN02471957 APLF00000000.1 reference genome 1189619 251 Psychroflexus gondwanensis ACAM 44 strain=ACAM 44 na latest Contig Major Full 2013-04-08 Pgondw1.0 University of Tasmania GCA_000355905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/905/GCF_000355905.1_Pgondw1.0/ na assembly from type material na haploid bacteria 3311768 3311768 36.000000 0 62 62 NCBI RefSeq GCF_000355905.1-RS_2025_12_10 2025-12-10 3027 2935 50 24391155 GCF_000355925.1 PRJNA224116 SAMN02436684 AJUZ00000000.1 na 1159099 1313 Streptococcus pneumoniae PNI0212 strain=PNI0212 na latest Scaffold Major Full 2013-04-09 ASM35592v1 Washington University GCA_000355925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/925/GCF_000355925.1_ASM35592v1/ na na na haploid bacteria 2028004 2009004 39.500000 0 126 145 NCBI RefSeq GCF_000355925.1-RS_2026_02_01 2026-02-01 2074 1891 36 na GCF_000355945.1 PRJNA224116 SAMN02436799 AJUY00000000.1 na 1159096 1313 Streptococcus pneumoniae PNI0164 strain=PNI0164 na latest Scaffold Major Full 2013-04-09 ASM35594v1 Washington University GCA_000355945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/945/GCF_000355945.1_ASM35594v1/ na na na haploid bacteria 2076249 2016249 39.500000 0 123 183 NCBI RefSeq GCF_000355945.1-RS_2026_01_11 2026-01-11 2101 1919 32 na GCF_000355965.1 PRJNA224116 SAMN02436798 AJUX00000000.1 na 1159095 1313 Streptococcus pneumoniae PNI0159 strain=PNI0159 na latest Scaffold Major Full 2013-04-09 ASM35596v1 Washington University GCA_000355965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/965/GCF_000355965.1_ASM35596v1/ na na na haploid bacteria 2034081 2015081 39.500000 0 112 131 NCBI RefSeq GCF_000355965.1-RS_2026_02_01 2026-02-01 2072 1892 35 na GCF_000355985.1 PRJNA224116 SAMN02436862 AJUW00000000.1 na 1159097 1313 Streptococcus pneumoniae PNI0197 strain=PNI0197 na latest Scaffold Major Full 2013-04-09 ASM35598v1 Washington University GCA_000355985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/355/985/GCF_000355985.1_ASM35598v1/ na na na haploid bacteria 1989829 1980614 40.000000 0 118 142 NCBI RefSeq GCF_000355985.1-RS_2026_02_01 2026-02-01 2049 1868 43 na GCF_000356005.2 PRJNA224116 SAMN00829404 APYV00000000.1 na 1116068 562 Escherichia coli P0301867.4 strain=P0301867.4 na latest Contig Minor Full 2013-04-08 ASM35600v2 IGS GCA_000356005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/005/GCF_000356005.2_ASM35600v2/ na na na haploid bacteria 5175693 5175693 50.500000 0 130 130 NCBI RefSeq GCF_000356005.2-RS_2025_06_17 2025-06-17 5250 4805 111 na GCF_000356025.2 PRJNA224116 SAMN00858016 APZU00000000.1 na 1125641 562 Escherichia coli P0301867.2 strain=P0301867.2 na latest Contig Minor Full 2013-04-08 ASM35602v2 IGS GCA_000356025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/025/GCF_000356025.2_ASM35602v2/ na na na haploid bacteria 5191414 5191414 50.500000 0 147 147 NCBI RefSeq GCF_000356025.2-RS_2025_06_17 2025-06-17 5316 4825 128 na GCF_000356045.2 PRJNA224116 SAMN00829233 AQEH00000000.1 na 1116103 562 Escherichia coli 180050 strain=180050 na latest Contig Minor Full 2013-04-08 ASM35604v2 IGS GCA_000356045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/045/GCF_000356045.2_ASM35604v2/ na na na haploid bacteria 4808558 4808558 50.500000 0 134 134 NCBI RefSeq GCF_000356045.2-RS_2025_06_16 2025-06-16 4891 4426 109 na GCF_000356065.2 PRJNA224116 SAMN00829239 AQEC00000000.1 na 1116004 562 Escherichia coli 2729250 strain=2729250 na latest Contig Minor Full 2013-04-08 ASM35606v2 IGS GCA_000356065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/065/GCF_000356065.2_ASM35606v2/ na na na haploid bacteria 5082168 5082168 50.500000 0 147 147 NCBI RefSeq GCF_000356065.2-RS_2025_06_17 2025-06-17 5190 4759 117 na GCF_000356085.2 PRJNA224116 SAMN00829252 AQGH00000000.1 na 1116008 562 Escherichia coli 2735000 strain=2735000 na latest Contig Minor Full 2013-04-08 ASM35608v2 IGS GCA_000356085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/085/GCF_000356085.2_ASM35608v2/ na na na haploid bacteria 4991369 4991369 50.500000 0 103 103 NCBI RefSeq GCF_000356085.2-RS_2025_06_17 2025-06-17 5026 4689 103 na GCF_000356105.2 PRJNA224116 SAMN00828913 AQGI00000000.1 na 1116003 562 Escherichia coli 174900 strain=174900 na latest Contig Minor Full 2013-04-08 ASM35610v2 IGS GCA_000356105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/105/GCF_000356105.2_ASM35610v2/ na na na haploid bacteria 4999793 4999793 50.500000 0 100 100 NCBI RefSeq GCF_000356105.2-RS_2025_06_17 2025-06-17 5010 4693 105 na GCF_000356125.1 PRJNA224116 SAMN00829235 AQEF00000000.1 na 1116130 562 Escherichia coli 199900.1 strain=199900.1 na latest Contig Major Full 2013-04-08 ASM35612v1 IGS GCA_000356125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/125/GCF_000356125.1_ASM35612v1/ na na na haploid bacteria 5057835 5057835 50.500000 0 125 125 NCBI RefSeq GCF_000356125.1-RS_2025_08_18 2025-08-18 5079 4736 104 na GCF_000356145.2 PRJNA224116 SAMN00829240 AQED00000000.1 na 1116123 562 Escherichia coli 2726950 strain=2726950 na latest Contig Minor Full 2013-04-08 ASM35614v2 IGS GCA_000356145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/145/GCF_000356145.2_ASM35614v2/ na na na haploid bacteria 4970751 4970751 50.500000 0 185 185 NCBI RefSeq GCF_000356145.2-RS_2025_06_17 2025-06-17 5169 4666 111 na GCF_000356165.2 PRJNA224116 SAMN00829338 AQET00000000.1 na 1116141 562 Escherichia coli P0298942.1 strain=P0298942.1 na latest Contig Minor Full 2013-04-08 ASM35616v2 IGS GCA_000356165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/165/GCF_000356165.2_ASM35616v2/ na na na haploid bacteria 5174572 5174572 50.500000 0 67 67 NCBI RefSeq GCF_000356165.2-RS_2025_06_16 2025-06-16 5237 4754 130 na GCF_000356185.2 PRJNA224116 SAMN00829237 AQEE00000000.1 na 1116121 562 Escherichia coli 2722950 strain=2722950 na latest Contig Minor Full 2013-04-08 ASM35618v2 IGS GCA_000356185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/185/GCF_000356185.2_ASM35618v2/ na na na haploid bacteria 4934921 4934921 50.500000 0 156 156 NCBI RefSeq GCF_000356185.2-RS_2025_06_17 2025-06-17 5045 4536 110 na GCF_000356205.2 PRJNA224116 SAMN00829260 APXE00000000.1 na 1116006 562 Escherichia coli 2730450 strain=2730450 na latest Contig Minor Full 2013-04-08 ASM35620v2 IGS GCA_000356205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/205/GCF_000356205.2_ASM35620v2/ na na na haploid bacteria 5021465 5021465 50.500000 0 221 221 NCBI RefSeq GCF_000356205.2-RS_2025_06_16 2025-06-16 5280 4726 109 na GCF_000356225.2 PRJNA224116 SAMN00829257 APXF00000000.1 na 1116009 562 Escherichia coli 2741950 strain=2741950 na latest Contig Minor Full 2013-04-08 ASM35622v2 IGS GCA_000356225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/225/GCF_000356225.2_ASM35622v2/ na na na haploid bacteria 4962431 4962431 50.500000 0 208 208 NCBI RefSeq GCF_000356225.2-RS_2025_06_17 2025-06-17 5187 4679 103 na GCF_000356245.1 PRJNA224116 SAMN00829286 APXK00000000.1 na 1116036 562 Escherichia coli 2875150 strain=2875150 na latest Contig Major Full 2013-04-08 ASM35624v1 IGS GCA_000356245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/245/GCF_000356245.1_ASM35624v1/ na na na haploid bacteria 5148955 5148955 50.500000 0 276 276 NCBI RefSeq GCF_000356245.1-RS_2025_08_12 2025-08-12 5491 4755 123 na GCF_000356265.2 PRJNA224116 SAMN00829289 APXL00000000.1 na 1116110 562 Escherichia coli BCE008_MS-01 strain=BCE008_MS-01 na latest Contig Minor Full 2013-04-08 ASM35626v2 IGS GCA_000356265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/265/GCF_000356265.2_ASM35626v2/ na na na haploid bacteria 4904573 4904573 51.000000 0 573 573 NCBI RefSeq GCF_000356265.2-RS_2025_06_17 2025-06-17 5234 4613 114 na GCF_000356285.2 PRJNA224116 SAMN00829292 APXM00000000.1 na 1116114 562 Escherichia coli BCE011_MS-01 strain=BCE011_MS-01 na latest Contig Minor Full 2013-04-08 ASM35628v2 IGS GCA_000356285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/285/GCF_000356285.2_ASM35628v2/ na na na haploid bacteria 4918707 4918707 50.500000 0 317 317 NCBI RefSeq GCF_000356285.2-RS_2025_06_16 2025-06-16 5103 4499 114 na GCF_000356305.2 PRJNA224116 SAMN00829232 APXC00000000.1 na 1116104 562 Escherichia coli 180200 strain=180200 na latest Contig Minor Full 2013-04-08 ASM35630v2 IGS GCA_000356305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/305/GCF_000356305.2_ASM35630v2/ na na na haploid bacteria 5023688 5023688 50.500000 0 328 328 NCBI RefSeq GCF_000356305.2-RS_2025_06_17 2025-06-17 5163 4694 109 na GCF_000356325.2 PRJNA224116 SAMN00829262 APXD00000000.1 na 1116005 562 Escherichia coli 2730350 strain=2730350 na latest Contig Minor Full 2013-04-08 ASM35632v2 IGS GCA_000356325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/325/GCF_000356325.2_ASM35632v2/ na na na haploid bacteria 4808018 4808018 50.500000 0 270 270 NCBI RefSeq GCF_000356325.2-RS_2025_06_17 2025-06-17 4879 4418 102 na GCF_000356345.2 PRJNA224116 SAMN00829227 APXA00000000.1 na 1116108 562 Escherichia coli 178900 strain=178900 na latest Contig Minor Full 2013-04-08 ASM35634v2 IGS GCA_000356345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/345/GCF_000356345.2_ASM35634v2/ na na na haploid bacteria 5111790 5111790 51.000000 0 354 354 NCBI RefSeq GCF_000356345.2-RS_2025_06_17 2025-06-17 5295 4739 116 na GCF_000356365.2 PRJNA224116 SAMN00829229 APXB00000000.1 na 1116109 562 Escherichia coli 179550 strain=179550 na latest Contig Minor Full 2013-04-08 ASM35636v2 IGS GCA_000356365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/365/GCF_000356365.2_ASM35636v2/ na na na haploid bacteria 5039854 5039854 51.000000 0 384 384 NCBI RefSeq GCF_000356365.2-RS_2025_06_17 2025-06-17 5220 4748 109 na GCF_000356385.1 PRJNA224116 SAMN00829296 APXN00000000.1 na 1116116 562 Escherichia coli BCE030_MS-09 strain=BCE030_MS-09 na latest Contig Major Full 2013-04-08 ASM35638v1 IGS GCA_000356385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/385/GCF_000356385.1_ASM35638v1/ na na na haploid bacteria 5121565 5121565 50.500000 0 252 252 NCBI RefSeq GCF_000356385.1-RS_2025_08_11 2025-08-11 5397 4743 113 na GCF_000356405.2 PRJNA224116 SAMN00829293 APXO00000000.1 na 1116117 562 Escherichia coli BCE032_MS-12 strain=BCE032_MS-12 na latest Contig Minor Full 2013-04-08 ASM35640v2 IGS GCA_000356405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/405/GCF_000356405.2_ASM35640v2/ na na na haploid bacteria 5121129 5121129 50.500000 0 188 188 NCBI RefSeq GCF_000356405.2-RS_2025_06_16 2025-06-16 5244 4680 101 na GCF_000356425.2 PRJNA224116 SAMN00829336 APXP00000000.1 na 1116137 562 Escherichia coli MP021561.3 strain=MP021561.3 na latest Contig Minor Full 2013-04-08 ASM35642v2 IGS GCA_000356425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/425/GCF_000356425.2_ASM35642v2/ na na na haploid bacteria 5307180 5307180 50.500000 0 212 212 NCBI RefSeq GCF_000356425.2-RS_2025_06_17 2025-06-17 5394 4959 106 na GCF_000356445.2 PRJNA224116 SAMN00829275 APXG00000000.1 na 1116022 562 Escherichia coli 2860650 strain=2860650 na latest Contig Minor Full 2013-04-08 ASM35644v2 IGS GCA_000356445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/445/GCF_000356445.2_ASM35644v2/ na na na haploid bacteria 5133605 5133605 50.500000 0 174 174 NCBI RefSeq GCF_000356445.2-RS_2025_06_17 2025-06-17 5243 4829 115 na GCF_000356465.2 PRJNA224116 SAMN00829272 APXH00000000.1 na 1116024 562 Escherichia coli 2862600 strain=2862600 na latest Contig Minor Full 2013-04-08 ASM35646v2 IGS GCA_000356465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/465/GCF_000356465.2_ASM35646v2/ na na na haploid bacteria 4987011 4987011 50.500000 0 158 158 NCBI RefSeq GCF_000356465.2-RS_2025_06_15 2025-06-15 5076 4579 98 na GCF_000356485.2 PRJNA224116 SAMN00829273 APXI00000000.1 na 1116025 562 Escherichia coli 2864350 strain=2864350 na latest Contig Minor Full 2013-04-08 ASM35648v2 IGS GCA_000356485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/485/GCF_000356485.2_ASM35648v2/ na na na haploid bacteria 5217016 5217016 50.500000 0 120 120 NCBI RefSeq GCF_000356485.2-RS_2025_06_16 2025-06-16 5217 4917 94 na GCF_000356505.2 PRJNA224116 SAMN00829277 APXJ00000000.1 na 1116027 562 Escherichia coli 2866350 strain=2866350 na latest Contig Minor Full 2013-04-08 ASM35650v2 IGS GCA_000356505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/505/GCF_000356505.2_ASM35650v2/ na na na haploid bacteria 5051011 5051011 50.500000 0 135 135 NCBI RefSeq GCF_000356505.2-RS_2025_06_15 2025-06-15 5110 4740 103 na GCF_000356525.2 PRJNA224116 SAMN00829340 APXQ00000000.1 na 1116147 562 Escherichia coli P0298942.10 strain=P0298942.10 na latest Contig Minor Full 2013-04-08 ASM35652v2 IGS GCA_000356525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/525/GCF_000356525.2_ASM35652v2/ na na na haploid bacteria 5084428 5084428 50.500000 0 173 173 NCBI RefSeq GCF_000356525.2-RS_2025_06_15 2025-06-15 5196 4692 99 na GCF_000356545.1 PRJNA224116 SAMN00829411 AQEP00000000.1 na 1116073 562 Escherichia coli P0302293.2 strain=P0302293.2 na latest Contig Major Full 2013-04-08 ASM35654v1 IGS GCA_000356545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/545/GCF_000356545.1_ASM35654v1/ na na na haploid bacteria 5165353 5165353 50.500000 0 37 37 NCBI RefSeq GCF_000356545.1-RS_2025_06_13 2025-06-13 5132 4787 128 na GCF_000356565.1 PRJNA224116 SAMN00829503 AQEM00000000.1 na 1116177 562 Escherichia coli P0304816.1 strain=P0304816.1 na latest Contig Major Full 2013-04-08 ASM35656v1 IGS GCA_000356565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/565/GCF_000356565.1_ASM35656v1/ na na na haploid bacteria 5406666 5406666 50.500000 0 57 57 NCBI RefSeq GCF_000356565.1-RS_2025_06_13 2025-06-13 5403 4956 139 na GCF_000356585.2 PRJNA224116 SAMN00855354 AQEL00000000.1 na 1125644 562 Escherichia coli P0305260.1 strain=P0305260.1 na latest Contig Minor Full 2013-04-08 ASM35658v2 IGS GCA_000356585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/585/GCF_000356585.2_ASM35658v2/ na na na haploid bacteria 4869834 4869834 51.000000 0 25 25 NCBI RefSeq GCF_000356585.2-RS_2025_06_17 2025-06-17 4797 4431 128 na GCF_000356605.2 PRJNA224116 SAMN00829535 AQEK00000000.1 na 1116089 562 Escherichia coli p0305293.1 strain=p0305293.1 na latest Contig Minor Full 2013-04-08 ASM35660v2 IGS GCA_000356605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/605/GCF_000356605.2_ASM35660v2/ na na na haploid bacteria 5234657 5234657 50.500000 0 44 44 NCBI RefSeq GCF_000356605.2-RS_2025_06_15 2025-06-15 5231 4811 140 na GCF_000356625.2 PRJNA224116 SAMN00829238 AQFE00000000.1 na 1116122 562 Escherichia coli 2726800 strain=2726800 na latest Contig Minor Full 2013-04-08 ASM35662v2 IGS GCA_000356625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/625/GCF_000356625.2_ASM35662v2/ na na na haploid bacteria 5216988 5216988 50.500000 0 48 48 NCBI RefSeq GCF_000356625.2-RS_2025_06_16 2025-06-16 5227 4797 129 na GCF_000356645.2 PRJNA224116 SAMN00829352 AQES00000000.1 na 1116152 562 Escherichia coli P0299438.2 strain=P0299438.2 na latest Contig Minor Full 2013-04-08 ASM35664v2 IGS GCA_000356645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/645/GCF_000356645.2_ASM35664v2/ na na na haploid bacteria 4912356 4912356 51.000000 0 26 26 NCBI RefSeq GCF_000356645.2-RS_2025_06_16 2025-06-16 4838 4450 144 na GCF_000356665.2 PRJNA224116 SAMN00829362 AQER00000000.1 na 1116047 562 Escherichia coli P0299917.1 strain=P0299917.1 na latest Contig Minor Full 2013-04-08 ASM35666v2 IGS GCA_000356665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/665/GCF_000356665.2_ASM35666v2/ na na na haploid bacteria 5538677 5538677 50.500000 0 53 53 NCBI RefSeq GCF_000356665.2-RS_2025_06_16 2025-06-16 5581 5143 142 na GCF_000356685.2 PRJNA224116 SAMN00829265 AQGG00000000.1 na 1116126 562 Escherichia coli 2846750 strain=2846750 na latest Contig Minor Full 2013-04-08 ASM35668v2 IGS GCA_000356685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/685/GCF_000356685.2_ASM35668v2/ na na na haploid bacteria 5056530 5056530 50.500000 0 193 193 NCBI RefSeq GCF_000356685.2-RS_2025_06_15 2025-06-15 5322 4761 119 na GCF_000356705.1 PRJNA224116 SAMN00829288 AQFJ00000000.1 na 1116113 562 Escherichia coli BCE007_MS-11 strain=BCE007_MS-11 na latest Contig Major Full 2013-04-08 ASM35670v1 IGS GCA_000356705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/705/GCF_000356705.1_ASM35670v1/ na na na haploid bacteria 5356788 5356788 50.500000 0 54 54 NCBI RefSeq GCF_000356705.1-RS_2025_06_13 2025-06-13 5467 4873 149 na GCF_000356725.1 PRJNA224116 SAMN00829291 AQFI00000000.1 na 1116471 562 Escherichia coli BCE008_MS-13 strain=BCE008_MS-13 na latest Contig Major Full 2013-04-08 ASM35672v1 IGS GCA_000356725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/725/GCF_000356725.1_ASM35672v1/ na na na haploid bacteria 5139263 5139263 50.500000 0 32 32 NCBI RefSeq GCF_000356725.1-RS_2025_06_13 2025-06-13 5149 4690 144 na GCF_000356745.2 PRJNA224116 SAMN00829236 AQFH00000000.1 na 1116129 562 Escherichia coli 201600.1 strain=201600.1 na latest Contig Minor Full 2013-04-08 ASM35674v2 IGS GCA_000356745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/745/GCF_000356745.2_ASM35674v2/ na na na haploid bacteria 5143104 5143104 50.500000 0 51 51 NCBI RefSeq GCF_000356745.2-RS_2025_06_15 2025-06-15 5156 4720 142 na GCF_000356765.2 PRJNA224116 SAMN00829409 AQAA00000000.1 na 1116079 562 Escherichia coli P0302293.10 strain=P0302293.10 na latest Contig Minor Full 2013-04-08 ASM35676v2 IGS GCA_000356765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/765/GCF_000356765.2_ASM35676v2/ na na na haploid bacteria 5045963 5045963 51.000000 0 437 437 NCBI RefSeq GCF_000356765.2-RS_2025_06_15 2025-06-15 5229 4748 113 na GCF_000356785.2 PRJNA224116 SAMN00829412 AQAC00000000.1 na 1116075 562 Escherichia coli P0302293.4 strain=P0302293.4 na latest Contig Minor Full 2013-04-08 ASM35678v2 IGS GCA_000356785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/785/GCF_000356785.2_ASM35678v2/ na na na haploid bacteria 5227220 5227220 50.500000 0 133 133 NCBI RefSeq GCF_000356785.2-RS_2025_06_15 2025-06-15 5306 4933 110 na GCF_000356805.2 PRJNA224116 SAMN00829413 AQAB00000000.1 na 1116074 562 Escherichia coli P0302293.3 strain=P0302293.3 na latest Contig Minor Full 2013-04-08 ASM35680v2 IGS GCA_000356805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/805/GCF_000356805.2_ASM35680v2/ na na na haploid bacteria 5062385 5062385 50.500000 0 115 115 NCBI RefSeq GCF_000356805.2-RS_2025_06_15 2025-06-15 5121 4744 120 na GCF_000356825.2 PRJNA224116 SAMN00829533 AQBS00000000.1 na 1116083 562 Escherichia coli P0305260.9 strain=P0305260.9 na latest Contig Minor Full 2013-04-08 ASM35682v2 IGS GCA_000356825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/825/GCF_000356825.2_ASM35682v2/ na na na haploid bacteria 4826721 4826721 51.000000 0 129 129 NCBI RefSeq GCF_000356825.2-RS_2025_06_16 2025-06-16 4868 4477 106 na GCF_000356845.2 PRJNA224116 SAMN00857938 APZL00000000.1 na 1125636 562 Escherichia coli 2854350 strain=2854350 na latest Contig Minor Full 2013-04-08 ASM35684v2 IGS GCA_000356845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/845/GCF_000356845.2_ASM35684v2/ na na na haploid bacteria 4949223 4949223 50.500000 0 162 162 NCBI RefSeq GCF_000356845.2-RS_2025_06_15 2025-06-15 5120 4642 139 na GCF_000356865.2 PRJNA224116 SAMN00829539 APZI00000000.1 na 1116101 562 Escherichia coli p0305293.13 strain=p0305293.13 na latest Contig Minor Full 2013-04-08 ASM35686v2 IGS GCA_000356865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/865/GCF_000356865.2_ASM35686v2/ na na na haploid bacteria 4835478 4835478 51.000000 0 686 686 NCBI RefSeq GCF_000356865.2-RS_2025_06_16 2025-06-16 5153 4622 121 na GCF_000356885.2 PRJNA224116 SAMN00858089 APZM00000000.1 na 1125637 562 Escherichia coli BCE006_MS-23 strain=BCE006_MS-23 na latest Contig Minor Full 2013-04-08 ASM35688v2 IGS GCA_000356885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/885/GCF_000356885.2_ASM35688v2/ na na na haploid bacteria 5061229 5061229 50.500000 0 224 224 NCBI RefSeq GCF_000356885.2-RS_2025_06_15 2025-06-15 5358 4685 146 na GCF_000356905.1 PRJNA224116 SAMN00857936 APZJ00000000.1 na 1125652 562 Escherichia coli 179100 strain=179100 na latest Contig Major Full 2013-04-08 ASM35690v1 IGS GCA_000356905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/905/GCF_000356905.1_ASM35690v1/ na na na haploid bacteria 5217671 5217671 50.500000 0 194 194 NCBI RefSeq GCF_000356905.1-RS_2025_09_21 2025-09-21 5435 4902 147 na GCF_000356925.2 PRJNA224116 SAMN00857937 APZK00000000.1 na 1125635 562 Escherichia coli 2733950 strain=2733950 na latest Contig Minor Full 2013-04-08 ASM35692v2 IGS GCA_000356925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/925/GCF_000356925.2_ASM35692v2/ na na na haploid bacteria 5037682 5037682 50.500000 0 214 214 NCBI RefSeq GCF_000356925.2-RS_2025_06_16 2025-06-16 5273 4723 118 na GCF_000356945.1 PRJNA224116 SAMN00829414 AQAD00000000.1 na 1116076 562 Escherichia coli P0302293.6 strain=P0302293.6 na latest Contig Major Full 2013-04-08 ASM35694v1 IGS GCA_000356945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/945/GCF_000356945.1_ASM35694v1/ na na na haploid bacteria 5118609 5118609 50.500000 0 126 126 NCBI RefSeq GCF_000356945.1-RS_2025_08_11 2025-08-11 5186 4788 114 na GCF_000356965.1 PRJNA224116 SAMN00829418 AQAE00000000.1 na 1116077 562 Escherichia coli P0302293.8 strain=P0302293.8 na latest Contig Major Full 2013-04-08 ASM35696v1 IGS GCA_000356965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/965/GCF_000356965.1_ASM35696v1/ na na na haploid bacteria 5119812 5119812 50.500000 0 125 125 NCBI RefSeq GCF_000356965.1-RS_2025_08_12 2025-08-12 5169 4802 108 na GCF_000356985.2 PRJNA224116 SAMN00829351 APYB00000000.1 na 1116046 562 Escherichia coli P0299438.11 strain=P0299438.11 na latest Contig Minor Full 2013-04-08 ASM35698v2 IGS GCA_000356985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/356/985/GCF_000356985.2_ASM35698v2/ na na na haploid bacteria 5093245 5093245 50.500000 0 118 118 NCBI RefSeq GCF_000356985.2-RS_2025_06_16 2025-06-16 5129 4749 116 na GCF_000357005.2 PRJNA224116 SAMN00829353 APYC00000000.1 na 1116038 562 Escherichia coli P0299438.3 strain=P0299438.3 na latest Contig Minor Full 2013-04-08 ASM35700v2 IGS GCA_000357005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/005/GCF_000357005.2_ASM35700v2/ na na na haploid bacteria 5074185 5074185 50.500000 0 117 117 NCBI RefSeq GCF_000357005.2-RS_2025_06_17 2025-06-17 5121 4714 119 na GCF_000357025.2 PRJNA224116 SAMN00829354 APYD00000000.1 na 1116039 562 Escherichia coli P0299438.4 strain=P0299438.4 na latest Contig Minor Full 2013-04-08 ASM35702v2 IGS GCA_000357025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/025/GCF_000357025.2_ASM35702v2/ na na na haploid bacteria 5167697 5167697 50.500000 0 145 145 NCBI RefSeq GCF_000357025.2-RS_2025_06_16 2025-06-16 5300 4855 124 na GCF_000357045.2 PRJNA224116 SAMN00829355 APYE00000000.1 na 1116040 562 Escherichia coli P0299438.5 strain=P0299438.5 na latest Contig Minor Full 2013-04-08 ASM35704v2 IGS GCA_000357045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/045/GCF_000357045.2_ASM35704v2/ na na na haploid bacteria 5089590 5089590 50.500000 0 117 117 NCBI RefSeq GCF_000357045.2-RS_2025_06_17 2025-06-17 5131 4736 117 na GCF_000357065.2 PRJNA224116 SAMN00858012 APZP00000000.1 na 1125640 562 Escherichia coli P0298942.4 strain=P0298942.4 na latest Contig Minor Full 2013-04-08 ASM35706v2 IGS GCA_000357065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/065/GCF_000357065.2_ASM35706v2/ na na na haploid bacteria 5094028 5094028 50.500000 0 224 224 NCBI RefSeq GCF_000357065.2-RS_2025_06_17 2025-06-17 5365 4780 155 na GCF_000357085.1 PRJNA224116 SAMN00829408 APYY00000000.1 na 1116071 562 Escherichia coli P0301867.8 strain=P0301867.8 na latest Contig Major Full 2013-04-08 ASM35708v1 IGS GCA_000357085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/085/GCF_000357085.1_ASM35708v1/ na na na haploid bacteria 5100083 5100083 51.000000 0 635 635 NCBI RefSeq GCF_000357085.1-RS_2025_08_12 2025-08-12 5379 4778 111 na GCF_000357105.1 PRJNA224116 SAMN00857933 APZR00000000.1 na 1125649 562 Escherichia coli P0299483.2 strain=P0299483.2 na latest Contig Major Full 2013-04-08 ASM35710v1 IGS GCA_000357105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/105/GCF_000357105.1_ASM35710v1/ na na na haploid bacteria 5048678 5048678 50.500000 0 100 100 NCBI RefSeq GCF_000357105.1-RS_2025_06_14 2025-06-14 5081 4711 105 na GCF_000357125.1 PRJNA224116 SAMN00857934 APZS00000000.1 na 1125650 562 Escherichia coli P0299483.3 strain=P0299483.3 na latest Contig Major Full 2013-04-08 ASM35712v1 IGS GCA_000357125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/125/GCF_000357125.1_ASM35712v1/ na na na haploid bacteria 5063712 5063712 50.500000 0 130 130 NCBI RefSeq GCF_000357125.1-RS_2025_06_13 2025-06-13 5080 4739 102 na GCF_000357145.2 PRJNA224116 SAMN00829361 APYJ00000000.1 na 1116131 562 Escherichia coli P02997067.6 strain=P02997067.6 na latest Contig Minor Full 2013-04-08 ASM35714v2 IGS GCA_000357145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/145/GCF_000357145.2_ASM35714v2/ na na na haploid bacteria 5412738 5412738 50.500000 0 200 200 NCBI RefSeq GCF_000357145.2-RS_2025_06_16 2025-06-16 5595 5148 127 na GCF_000357165.1 PRJNA224116 SAMN00829363 APYK00000000.1 na 1116056 562 Escherichia coli P0299917.10 strain=P0299917.10 na latest Contig Major Full 2013-04-08 ASM35716v1 IGS GCA_000357165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/165/GCF_000357165.1_ASM35716v1/ na na na haploid bacteria 5396988 5396988 50.500000 0 190 190 NCBI RefSeq GCF_000357165.1-RS_2025_08_12 2025-08-12 5593 5155 119 na GCF_000357185.2 PRJNA224116 SAMN00829364 APYL00000000.1 na 1116048 562 Escherichia coli P0299917.2 strain=P0299917.2 na latest Contig Minor Full 2013-04-08 ASM35718v2 IGS GCA_000357185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/185/GCF_000357185.2_ASM35718v2/ na na na haploid bacteria 5252043 5252043 50.500000 0 177 177 NCBI RefSeq GCF_000357185.2-RS_2025_06_17 2025-06-17 5403 4958 113 na GCF_000357205.2 PRJNA224116 SAMN00829365 APYM00000000.1 na 1116049 562 Escherichia coli P0299917.3 strain=P0299917.3 na latest Contig Minor Full 2013-04-08 ASM35720v2 IGS GCA_000357205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/205/GCF_000357205.2_ASM35720v2/ na na na haploid bacteria 4980185 4980185 51.000000 0 374 374 NCBI RefSeq GCF_000357205.2-RS_2025_06_16 2025-06-16 5111 4742 101 na GCF_000357225.2 PRJNA224116 SAMN00829356 APYF00000000.1 na 1116041 562 Escherichia coli P0299438.6 strain=P0299438.6 na latest Contig Minor Full 2013-04-08 ASM35722v2 IGS GCA_000357225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/225/GCF_000357225.2_ASM35722v2/ na na na haploid bacteria 5090136 5090136 50.500000 0 126 126 NCBI RefSeq GCF_000357225.2-RS_2025_06_17 2025-06-17 5142 4742 117 na GCF_000357245.1 PRJNA224116 SAMN00829357 APYG00000000.1 na 1116042 562 Escherichia coli P0299438.7 strain=P0299438.7 na latest Contig Major Full 2013-04-08 ASM35724v1 IGS GCA_000357245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/245/GCF_000357245.1_ASM35724v1/ na na na haploid bacteria 5094139 5094139 50.500000 0 122 122 NCBI RefSeq GCF_000357245.1-RS_2025_08_11 2025-08-11 5126 4733 113 na GCF_000357265.2 PRJNA224116 SAMN00829359 APYH00000000.1 na 1116043 562 Escherichia coli P0299438.8 strain=P0299438.8 na latest Contig Minor Full 2013-04-08 ASM35726v2 IGS GCA_000357265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/265/GCF_000357265.2_ASM35726v2/ na na na haploid bacteria 5093613 5093613 50.500000 0 121 121 NCBI RefSeq GCF_000357265.2-RS_2025_06_16 2025-06-16 5135 4737 110 na GCF_000357285.2 PRJNA224116 SAMN00829360 APYI00000000.1 na 1116044 562 Escherichia coli P0299438.9 strain=P0299438.9 na latest Contig Minor Full 2013-04-08 ASM35728v2 IGS GCA_000357285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/285/GCF_000357285.2_ASM35728v2/ na na na haploid bacteria 4830085 4830085 51.000000 0 134 134 NCBI RefSeq GCF_000357285.2-RS_2025_06_17 2025-06-17 4867 4444 112 na GCF_000357305.2 PRJNA224116 SAMN00829366 APYN00000000.1 na 1116050 562 Escherichia coli P0299917.4 strain=P0299917.4 na latest Contig Minor Full 2013-04-08 ASM35730v2 IGS GCA_000357305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/305/GCF_000357305.2_ASM35730v2/ na na na haploid bacteria 5344758 5344758 50.500000 0 195 195 NCBI RefSeq GCF_000357305.2-RS_2025_06_16 2025-06-16 5523 5087 114 na GCF_000357325.1 PRJNA224116 SAMN00829368 APYO00000000.1 na 1116051 562 Escherichia coli P0299917.5 strain=P0299917.5 na latest Contig Major Full 2013-04-08 ASM35732v1 IGS GCA_000357325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/325/GCF_000357325.1_ASM35732v1/ na na na haploid bacteria 5394923 5394923 50.500000 0 210 210 NCBI RefSeq GCF_000357325.1-RS_2025_09_28 2025-09-28 5596 5132 125 na GCF_000357345.2 PRJNA224116 SAMN00829367 APYP00000000.1 na 1116052 562 Escherichia coli P0299917.6 strain=P0299917.6 na latest Contig Minor Full 2013-04-08 ASM35734v2 IGS GCA_000357345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/345/GCF_000357345.2_ASM35734v2/ na na na haploid bacteria 5340854 5340854 50.500000 0 180 180 NCBI RefSeq GCF_000357345.2-RS_2025_06_16 2025-06-16 5529 5091 120 na GCF_000357365.2 PRJNA224116 SAMN00829369 APYQ00000000.1 na 1116053 562 Escherichia coli P0299917.7 strain=P0299917.7 na latest Contig Minor Full 2013-04-08 ASM35736v2 IGS GCA_000357365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/365/GCF_000357365.2_ASM35736v2/ na na na haploid bacteria 5253530 5253530 50.500000 0 181 181 NCBI RefSeq GCF_000357365.2-RS_2025_06_16 2025-06-16 5407 4980 119 na GCF_000357385.2 PRJNA224116 SAMN00829344 APXU00000000.1 na 1116151 562 Escherichia coli P0298942.15 strain=P0298942.15 na latest Contig Minor Full 2013-04-08 ASM35738v2 IGS GCA_000357385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/385/GCF_000357385.2_ASM35738v2/ na na na haploid bacteria 5052312 5052312 50.500000 0 210 210 NCBI RefSeq GCF_000357385.2-RS_2025_06_17 2025-06-17 5253 4705 117 na GCF_000357405.2 PRJNA224116 SAMN00829345 APXV00000000.1 na 1116142 562 Escherichia coli P0298942.2 strain=P0298942.2 na latest Contig Minor Full 2013-04-08 ASM35740v2 IGS GCA_000357405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/405/GCF_000357405.2_ASM35740v2/ na na na haploid bacteria 4874222 4874222 51.000000 0 298 298 NCBI RefSeq GCF_000357405.2-RS_2025_06_16 2025-06-16 5009 4529 96 na GCF_000357425.2 PRJNA224116 SAMN00829346 APXW00000000.1 na 1116143 562 Escherichia coli P0298942.6 strain=P0298942.6 na latest Contig Minor Full 2013-04-08 ASM35742v2 IGS GCA_000357425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/425/GCF_000357425.2_ASM35742v2/ na na na haploid bacteria 5050971 5050971 50.500000 0 199 199 NCBI RefSeq GCF_000357425.2-RS_2025_06_17 2025-06-17 5291 4801 115 na GCF_000357445.2 PRJNA224116 SAMN00858015 APZO00000000.1 na 1125639 562 Escherichia coli P0298942.3 strain=P0298942.3 na latest Contig Minor Full 2013-04-08 ASM35744v2 IGS GCA_000357445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/445/GCF_000357445.2_ASM35744v2/ na na na haploid bacteria 5057343 5057343 50.500000 0 207 207 NCBI RefSeq GCF_000357445.2-RS_2025_06_17 2025-06-17 5311 4689 137 na GCF_000357465.2 PRJNA224116 SAMN00857931 APZQ00000000.1 na 1125648 562 Escherichia coli P0299483.1 strain=P0299483.1 na latest Contig Minor Full 2013-04-08 ASM35746v2 IGS GCA_000357465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/465/GCF_000357465.2_ASM35746v2/ na na na haploid bacteria 5053343 5053343 50.500000 0 117 117 NCBI RefSeq GCF_000357465.2-RS_2025_06_16 2025-06-16 5113 4710 157 na GCF_000357485.2 PRJNA224116 SAMN00858020 APZZ00000000.1 na 1125646 562 Escherichia coli p0305293.14 strain=p0305293.14 na latest Contig Minor Full 2013-04-08 ASM35748v2 IGS GCA_000357485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/485/GCF_000357485.2_ASM35748v2/ na na na haploid bacteria 5109116 5109116 50.500000 0 160 160 NCBI RefSeq GCF_000357485.2-RS_2025_06_17 2025-06-17 5304 4802 151 na GCF_000357505.2 PRJNA224116 SAMN00829373 APYS00000000.1 na 1116055 562 Escherichia coli P0299917.9 strain=P0299917.9 na latest Contig Minor Full 2013-04-08 ASM35750v2 IGS GCA_000357505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/505/GCF_000357505.2_ASM35750v2/ na na na haploid bacteria 5325675 5325675 50.500000 0 195 195 NCBI RefSeq GCF_000357505.2-RS_2025_06_17 2025-06-17 5486 5037 121 na GCF_000357525.2 PRJNA224116 SAMN00829374 APYT00000000.1 na 1116072 562 Escherichia coli P0301867.11 strain=P0301867.11 na latest Contig Minor Full 2013-04-08 ASM35752v2 IGS GCA_000357525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/525/GCF_000357525.2_ASM35752v2/ na na na haploid bacteria 5214769 5214769 50.500000 0 151 151 NCBI RefSeq GCF_000357525.2-RS_2025_06_17 2025-06-17 5316 4845 111 na GCF_000357545.2 PRJNA224116 SAMN00829347 APXX00000000.1 na 1116144 562 Escherichia coli P0298942.7 strain=P0298942.7 na latest Contig Minor Full 2013-04-08 ASM35754v2 IGS GCA_000357545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/545/GCF_000357545.2_ASM35754v2/ na na na haploid bacteria 5037371 5037371 50.500000 0 217 217 NCBI RefSeq GCF_000357545.2-RS_2025_06_17 2025-06-17 5258 4756 110 na GCF_000357565.2 PRJNA224116 SAMN00829348 APXY00000000.1 na 1116145 562 Escherichia coli P0298942.8 strain=P0298942.8 na latest Contig Minor Full 2013-04-08 ASM35756v2 IGS GCA_000357565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/565/GCF_000357565.2_ASM35756v2/ na na na haploid bacteria 4955416 4955416 51.000000 0 441 441 NCBI RefSeq GCF_000357565.2-RS_2025_06_17 2025-06-17 5251 4643 117 na GCF_000357585.2 PRJNA224116 SAMN00829350 APYA00000000.1 na 1116045 562 Escherichia coli P0299438.10 strain=P0299438.10 na latest Contig Minor Full 2013-04-08 ASM35758v2 IGS GCA_000357585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/585/GCF_000357585.2_ASM35758v2/ na na na haploid bacteria 5083747 5083747 50.500000 0 103 103 NCBI RefSeq GCF_000357585.2-RS_2025_06_17 2025-06-17 5121 4747 101 na GCF_000357605.2 PRJNA224116 SAMN00829423 APZA00000000.1 na 1116159 562 Escherichia coli P0302308.11 strain=P0302308.11 na latest Contig Minor Full 2013-04-08 ASM35760v2 IGS GCA_000357605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/605/GCF_000357605.2_ASM35760v2/ na na na haploid bacteria 5154387 5154387 50.500000 0 140 140 NCBI RefSeq GCF_000357605.2-RS_2025_06_17 2025-06-17 5192 4801 113 na GCF_000357625.2 PRJNA224116 SAMN00858017 APZT00000000.1 na 1125642 562 Escherichia coli P0301867.13 strain=P0301867.13 na latest Contig Minor Full 2013-04-08 ASM35762v2 IGS GCA_000357625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/625/GCF_000357625.2_ASM35762v2/ na na na haploid bacteria 5213808 5213808 50.500000 0 143 143 NCBI RefSeq GCF_000357625.2-RS_2025_06_17 2025-06-17 5336 4826 146 na GCF_000357645.1 PRJNA224116 SAMN00857932 APZV00000000.1 na 1125647 562 Escherichia coli P0301904.3 strain=P0301904.3 na latest Contig Major Full 2013-04-08 ASM35764v1 IGS GCA_000357645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/645/GCF_000357645.1_ASM35764v1/ na na na haploid bacteria 5022210 5022210 50.500000 0 190 190 NCBI RefSeq GCF_000357645.1-RS_2025_06_14 2025-06-14 5244 4655 157 na GCF_000357665.2 PRJNA224116 SAMN00858018 APZW00000000.1 na 1125643 562 Escherichia coli P0302293.7 strain=P0302293.7 na latest Contig Minor Full 2013-04-08 ASM35766v2 IGS GCA_000357665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/665/GCF_000357665.2_ASM35766v2/ na na na haploid bacteria 5117032 5117032 50.500000 0 120 120 NCBI RefSeq GCF_000357665.2-RS_2025_06_17 2025-06-17 5204 4802 140 na GCF_000357685.2 PRJNA224116 SAMN00857935 APZX00000000.1 na 1125651 562 Escherichia coli P0304799.3 strain=P0304799.3 na latest Contig Minor Full 2013-04-08 ASM35768v2 IGS GCA_000357685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/685/GCF_000357685.2_ASM35768v2/ na na na haploid bacteria 5311938 5311938 51.000000 0 490 490 NCBI RefSeq GCF_000357685.2-RS_2025_06_17 2025-06-17 5563 4987 138 na GCF_000357705.2 PRJNA224116 SAMN00858019 APZY00000000.1 na 1125645 562 Escherichia coli P0305260.2 strain=P0305260.2 na latest Contig Minor Full 2013-04-08 ASM35770v2 IGS GCA_000357705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/705/GCF_000357705.2_ASM35770v2/ na na na haploid bacteria 4808306 4808306 51.000000 0 121 121 NCBI RefSeq GCF_000357705.2-RS_2025_06_16 2025-06-16 4858 4398 130 na GCF_000357725.1 PRJNA224116 SAMN00829341 APXR00000000.1 na 1116148 562 Escherichia coli P0298942.11 strain=P0298942.11 na latest Contig Major Full 2013-04-08 ASM35772v1 IGS GCA_000357725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/725/GCF_000357725.1_ASM35772v1/ na na na haploid bacteria 5091775 5091775 50.500000 0 205 205 NCBI RefSeq GCF_000357725.1-RS_2025_08_11 2025-08-11 5287 4752 107 na GCF_000357745.1 PRJNA224116 SAMN00829349 APXZ00000000.1 na 1116146 562 Escherichia coli P0298942.9 strain=P0298942.9 na latest Contig Major Full 2013-04-08 ASM35774v1 IGS GCA_000357745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/745/GCF_000357745.1_ASM35774v1/ na na na haploid bacteria 4735492 4735492 51.500000 0 387 387 NCBI RefSeq GCF_000357745.1-RS_2025_08_18 2025-08-18 4864 4389 97 na GCF_000357765.2 PRJNA224116 SAMN00829427 APZE00000000.1 na 1116154 562 Escherichia coli P0302308.2 strain=P0302308.2 na latest Contig Minor Full 2013-04-08 ASM35776v2 IGS GCA_000357765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/765/GCF_000357765.2_ASM35776v2/ na na na haploid bacteria 5191434 5191434 50.500000 0 142 142 NCBI RefSeq GCF_000357765.2-RS_2025_06_17 2025-06-17 5246 4821 110 na GCF_000357785.2 PRJNA224116 SAMN00829429 APZF00000000.1 na 1116155 562 Escherichia coli P0302308.3 strain=P0302308.3 na latest Contig Minor Full 2013-04-08 ASM35778v2 IGS GCA_000357785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/785/GCF_000357785.2_ASM35778v2/ na na na haploid bacteria 5142014 5142014 50.500000 0 130 130 NCBI RefSeq GCF_000357785.2-RS_2025_06_17 2025-06-17 5192 4763 116 na GCF_000357805.1 PRJNA224116 SAMN00829431 APZG00000000.1 na 1116156 562 Escherichia coli P0302308.4 strain=P0302308.4 na latest Contig Major Full 2013-04-08 ASM35780v1 IGS GCA_000357805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/805/GCF_000357805.1_ASM35780v1/ na na na haploid bacteria 5152947 5152947 50.500000 0 402 402 NCBI RefSeq GCF_000357805.1-RS_2025_09_21 2025-09-21 5349 4862 110 na GCF_000357825.2 PRJNA224116 SAMN00829432 APZH00000000.1 na 1116157 562 Escherichia coli P0302308.5 strain=P0302308.5 na latest Contig Minor Full 2013-04-08 ASM35782v2 IGS GCA_000357825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/825/GCF_000357825.2_ASM35782v2/ na na na haploid bacteria 5146878 5146878 50.500000 0 132 132 NCBI RefSeq GCF_000357825.2-RS_2025_06_17 2025-06-17 5188 4801 118 na GCF_000357845.2 PRJNA224116 SAMN00829515 AQBD00000000.1 na 1116182 562 Escherichia coli P0304816.6 strain=P0304816.6 na latest Contig Minor Full 2013-04-08 ASM35784v2 IGS GCA_000357845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/845/GCF_000357845.2_ASM35784v2/ na na na haploid bacteria 5299335 5299335 50.500000 0 163 163 NCBI RefSeq GCF_000357845.2-RS_2025_06_16 2025-06-16 5352 4834 116 na GCF_000357865.2 PRJNA224116 SAMN00829516 AQBE00000000.1 na 1116183 562 Escherichia coli P0304816.7 strain=P0304816.7 na latest Contig Minor Full 2013-04-08 ASM35786v2 IGS GCA_000357865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/865/GCF_000357865.2_ASM35786v2/ na na na haploid bacteria 5287386 5287386 50.500000 0 178 178 NCBI RefSeq GCF_000357865.2-RS_2025_06_17 2025-06-17 5365 4935 113 na GCF_000357885.2 PRJNA224116 SAMN00829517 AQBF00000000.1 na 1116184 562 Escherichia coli P0304816.8 strain=P0304816.8 na latest Contig Minor Full 2013-04-08 ASM35788v2 IGS GCA_000357885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/885/GCF_000357885.2_ASM35788v2/ na na na haploid bacteria 5214827 5214827 50.500000 0 160 160 NCBI RefSeq GCF_000357885.2-RS_2025_06_17 2025-06-17 5293 4873 108 na GCF_000357905.2 PRJNA224116 SAMN00829518 AQBG00000000.1 na 1116185 562 Escherichia coli P0304816.9 strain=P0304816.9 na latest Contig Minor Full 2013-04-08 ASM35790v2 IGS GCA_000357905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/905/GCF_000357905.2_ASM35790v2/ na na na haploid bacteria 5191276 5191276 50.500000 0 193 193 NCBI RefSeq GCF_000357905.2-RS_2025_06_17 2025-06-17 5337 4883 116 na GCF_000357925.2 PRJNA224116 SAMN00829519 AQBH00000000.1 na 1116084 562 Escherichia coli P0305260.10 strain=P0305260.10 na latest Contig Minor Full 2013-04-08 ASM35792v2 IGS GCA_000357925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/925/GCF_000357925.2_ASM35792v2/ na na na haploid bacteria 4819309 4819309 51.000000 0 121 121 NCBI RefSeq GCF_000357925.2-RS_2025_06_17 2025-06-17 4869 4446 115 na GCF_000357965.2 PRJNA224116 SAMN00829520 AQBJ00000000.1 na 1116086 562 Escherichia coli P0305260.12 strain=P0305260.12 na latest Contig Minor Full 2013-04-08 ASM35796v2 IGS GCA_000357965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/965/GCF_000357965.2_ASM35796v2/ na na na haploid bacteria 4801427 4801427 51.000000 0 123 123 NCBI RefSeq GCF_000357965.2-RS_2025_06_17 2025-06-17 4845 4439 117 na GCF_000357985.2 PRJNA224116 SAMN00829523 AQBK00000000.1 na 1116087 562 Escherichia coli P0305260.13 strain=P0305260.13 na latest Contig Minor Full 2013-04-08 ASM35798v2 IGS GCA_000357985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/357/985/GCF_000357985.2_ASM35798v2/ na na na haploid bacteria 4834572 4834572 51.000000 0 124 124 NCBI RefSeq GCF_000357985.2-RS_2025_06_17 2025-06-17 4860 4431 113 na GCF_000358005.2 PRJNA224116 SAMN00829524 AQBL00000000.1 na 1116088 562 Escherichia coli P0305260.15 strain=P0305260.15 na latest Contig Minor Full 2013-04-08 ASM35800v2 IGS GCA_000358005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/005/GCF_000358005.2_ASM35800v2/ na na na haploid bacteria 4828120 4828120 51.000000 0 121 121 NCBI RefSeq GCF_000358005.2-RS_2025_06_17 2025-06-17 4865 4479 112 na GCF_000358025.2 PRJNA224116 SAMN00829525 AQBM00000000.1 na 1116192 562 Escherichia coli P0305260.3 strain=P0305260.3 na latest Contig Minor Full 2013-04-08 ASM35802v2 IGS GCA_000358025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/025/GCF_000358025.2_ASM35802v2/ na na na haploid bacteria 4859989 4859989 51.000000 0 174 174 NCBI RefSeq GCF_000358025.2-RS_2025_06_17 2025-06-17 4893 4488 109 na GCF_000358045.2 PRJNA224116 SAMN00829526 AQBN00000000.1 na 1116193 562 Escherichia coli P0305260.4 strain=P0305260.4 na latest Contig Minor Full 2013-04-08 ASM35804v2 IGS GCA_000358045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/045/GCF_000358045.2_ASM35804v2/ na na na haploid bacteria 4845288 4845288 51.000000 0 138 138 NCBI RefSeq GCF_000358045.2-RS_2025_06_16 2025-06-16 4885 4460 112 na GCF_000358065.2 PRJNA224116 SAMN00829528 AQBO00000000.1 na 1116194 562 Escherichia coli P0305260.5 strain=P0305260.5 na latest Contig Minor Full 2013-04-08 ASM35806v2 IGS GCA_000358065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/065/GCF_000358065.2_ASM35806v2/ na na na haploid bacteria 4848239 4848239 51.000000 0 176 176 NCBI RefSeq GCF_000358065.2-RS_2025_06_16 2025-06-16 4921 4520 111 na GCF_000358085.2 PRJNA224116 SAMN00829529 AQBP00000000.1 na 1116080 562 Escherichia coli P0305260.6 strain=P0305260.6 na latest Contig Minor Full 2013-04-08 ASM35808v2 IGS GCA_000358085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/085/GCF_000358085.2_ASM35808v2/ na na na haploid bacteria 4811713 4811713 51.000000 0 144 144 NCBI RefSeq GCF_000358085.2-RS_2025_06_17 2025-06-17 4844 4454 110 na GCF_000358105.2 PRJNA224116 SAMN00829531 AQBQ00000000.1 na 1116081 562 Escherichia coli P0305260.7 strain=P0305260.7 na latest Contig Minor Full 2013-04-08 ASM35810v2 IGS GCA_000358105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/105/GCF_000358105.2_ASM35810v2/ na na na haploid bacteria 4833903 4833903 51.000000 0 131 131 NCBI RefSeq GCF_000358105.2-RS_2025_06_16 2025-06-16 4880 4469 114 na GCF_000358125.1 PRJNA224116 SAMN00829532 AQBR00000000.1 na 1116082 562 Escherichia coli P0305260.8 strain=P0305260.8 na latest Contig Major Full 2013-04-08 ASM35812v1 IGS GCA_000358125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/125/GCF_000358125.1_ASM35812v1/ na na na haploid bacteria 4820619 4820619 51.000000 0 126 126 NCBI RefSeq GCF_000358125.1-RS_2025_09_21 2025-09-21 4867 4471 118 na GCF_000358145.2 PRJNA224116 SAMN00858014 APZN00000000.1 na 1125638 562 Escherichia coli MP020980.1 strain=MP020980.1 na latest Contig Minor Full 2013-04-08 ASM35814v2 IGS GCA_000358145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/145/GCF_000358145.2_ASM35814v2/ na na na haploid bacteria 5390767 5390767 50.500000 0 161 161 NCBI RefSeq GCF_000358145.2-RS_2025_06_17 2025-06-17 5532 5080 161 na GCF_000358165.2 PRJNA224116 SAMN00829417 AQAF00000000.1 na 1116078 562 Escherichia coli P0302293.9 strain=P0302293.9 na latest Contig Minor Full 2013-04-08 ASM35816v2 IGS GCA_000358165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/165/GCF_000358165.2_ASM35816v2/ na na na haploid bacteria 5140862 5140862 50.500000 0 126 126 NCBI RefSeq GCF_000358165.2-RS_2025_06_17 2025-06-17 5187 4821 110 na GCF_000358185.2 PRJNA224116 SAMN00829435 AQAG00000000.1 na 1116171 562 Escherichia coli P0304777.10 strain=P0304777.10 na latest Contig Minor Full 2013-04-08 ASM35818v2 IGS GCA_000358185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/185/GCF_000358185.2_ASM35818v2/ na na na haploid bacteria 5104354 5104354 50.500000 0 140 140 NCBI RefSeq GCF_000358185.2-RS_2025_06_17 2025-06-17 5171 4783 107 na GCF_000358205.2 PRJNA224116 SAMN00829436 AQAH00000000.1 na 1116172 562 Escherichia coli P0304777.11 strain=P0304777.11 na latest Contig Minor Full 2013-04-08 ASM35820v2 IGS GCA_000358205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/205/GCF_000358205.2_ASM35820v2/ na na na haploid bacteria 5092288 5092288 50.500000 0 133 133 NCBI RefSeq GCF_000358205.2-RS_2025_06_17 2025-06-17 5176 4771 111 na GCF_000358225.2 PRJNA224116 SAMN00829437 AQAI00000000.1 na 1116173 562 Escherichia coli P0304777.12 strain=P0304777.12 na latest Contig Minor Full 2013-04-08 ASM35822v2 IGS GCA_000358225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/225/GCF_000358225.2_ASM35822v2/ na na na haploid bacteria 5090314 5090314 50.500000 0 131 131 NCBI RefSeq GCF_000358225.2-RS_2025_06_16 2025-06-16 5164 4767 113 na GCF_000358245.2 PRJNA224116 SAMN00829440 AQAJ00000000.1 na 1116174 562 Escherichia coli P0304777.13 strain=P0304777.13 na latest Contig Minor Full 2013-04-08 ASM35824v2 IGS GCA_000358245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/245/GCF_000358245.2_ASM35824v2/ na na na haploid bacteria 5094469 5094469 50.500000 0 132 132 NCBI RefSeq GCF_000358245.2-RS_2025_06_17 2025-06-17 5173 4784 116 na GCF_000358265.2 PRJNA224116 SAMN00829491 AQAK00000000.1 na 1116175 562 Escherichia coli P0304777.14 strain=P0304777.14 na latest Contig Minor Full 2013-04-08 ASM35826v2 IGS GCA_000358265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/265/GCF_000358265.2_ASM35826v2/ na na na haploid bacteria 5090116 5090116 50.500000 0 119 119 NCBI RefSeq GCF_000358265.2-RS_2025_06_17 2025-06-17 5114 4753 100 na GCF_000358285.2 PRJNA224116 SAMN00829492 AQAL00000000.1 na 1116176 562 Escherichia coli P0304777.15 strain=P0304777.15 na latest Contig Minor Full 2013-04-08 ASM35828v2 IGS GCA_000358285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/285/GCF_000358285.2_ASM35828v2/ na na na haploid bacteria 5115205 5115205 50.500000 0 137 137 NCBI RefSeq GCF_000358285.2-RS_2025_06_17 2025-06-17 5186 4784 115 na GCF_000358315.1 PRJNA224116 SAMN00829494 AQAN00000000.1 na 1116165 562 Escherichia coli P0304777.3 strain=P0304777.3 na latest Contig Major Full 2013-04-08 ASM35831v1 IGS GCA_000358315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/315/GCF_000358315.1_ASM35831v1/ na na na haploid bacteria 5099621 5099621 50.500000 0 138 138 NCBI RefSeq GCF_000358315.1-RS_2025_08_18 2025-08-18 5163 4757 117 na GCF_000358335.2 PRJNA224116 SAMN00829496 AQAP00000000.1 na 1116167 562 Escherichia coli P0304777.5 strain=P0304777.5 na latest Contig Minor Full 2013-04-08 ASM35833v2 IGS GCA_000358335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/335/GCF_000358335.2_ASM35833v2/ na na na haploid bacteria 5110388 5110388 51.000000 0 511 511 NCBI RefSeq GCF_000358335.2-RS_2024_06_11 2024-06-11 5361 4829 113 na GCF_000358355.2 PRJNA224116 SAMN00829495 AQAO00000000.1 na 1116166 562 Escherichia coli P0304777.4 strain=P0304777.4 na latest Contig Minor Full 2013-04-08 ASM35835v2 IGS GCA_000358355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/355/GCF_000358355.2_ASM35835v2/ na na na haploid bacteria 5098647 5098647 50.500000 0 141 141 NCBI RefSeq GCF_000358355.2-RS_2025_06_16 2025-06-16 5174 4782 110 na GCF_000358375.1 PRJNA224116 SAMN00829497 AQAQ00000000.1 na 1116168 562 Escherichia coli P0304777.7 strain=P0304777.7 na latest Contig Major Full 2013-04-08 ASM35837v1 IGS GCA_000358375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/375/GCF_000358375.1_ASM35837v1/ na na na haploid bacteria 5096788 5096788 50.500000 0 138 138 NCBI RefSeq GCF_000358375.1-RS_2025_08_11 2025-08-11 5164 4769 104 na GCF_000358395.2 PRJNA224116 SAMN00829500 AQAR00000000.1 na 1116169 562 Escherichia coli P0304777.8 strain=P0304777.8 na latest Contig Minor Full 2013-04-08 ASM35839v2 IGS GCA_000358395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/395/GCF_000358395.2_ASM35839v2/ na na na haploid bacteria 5069181 5069181 50.500000 0 309 309 NCBI RefSeq GCF_000358395.2-RS_2025_06_15 2025-06-15 5235 4744 112 na GCF_000358415.2 PRJNA224116 SAMN00829502 AQAS00000000.1 na 1116170 562 Escherichia coli P0304777.9 strain=P0304777.9 na latest Contig Minor Full 2013-04-08 ASM35841v2 IGS GCA_000358415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/415/GCF_000358415.2_ASM35841v2/ na na na haploid bacteria 5083673 5083673 50.500000 0 199 199 NCBI RefSeq GCF_000358415.2-RS_2025_06_15 2025-06-15 5194 4741 115 na GCF_000358435.2 PRJNA224116 SAMN00829504 AQAT00000000.1 na 1116186 562 Escherichia coli P0304816.10 strain=P0304816.10 na latest Contig Minor Full 2013-04-08 ASM35843v2 IGS GCA_000358435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/435/GCF_000358435.2_ASM35843v2/ na na na haploid bacteria 5235757 5235757 50.500000 0 178 178 NCBI RefSeq GCF_000358435.2-RS_2025_06_15 2025-06-15 5306 4806 117 na GCF_000358455.2 PRJNA224116 SAMN00829505 AQAU00000000.1 na 1116187 562 Escherichia coli P0304816.11 strain=P0304816.11 na latest Contig Minor Full 2013-04-08 ASM35845v2 IGS GCA_000358455.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/455/GCF_000358455.2_ASM35845v2/ na na na haploid bacteria 5259546 5259546 50.500000 0 176 176 NCBI RefSeq GCF_000358455.2-RS_2025_06_15 2025-06-15 5324 4891 109 na GCF_000358475.1 PRJNA224116 SAMN00829506 AQAW00000000.1 na 1116189 562 Escherichia coli P0304816.13 strain=P0304816.13 na latest Contig Major Full 2013-04-08 ASM35847v1 IGS GCA_000358475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/475/GCF_000358475.1_ASM35847v1/ na na na haploid bacteria 5198295 5198295 50.500000 0 183 183 NCBI RefSeq GCF_000358475.1-RS_2025_08_11 2025-08-11 5331 4883 118 na GCF_000358495.2 PRJNA224116 SAMN00829507 AQAV00000000.1 na 1116188 562 Escherichia coli P0304816.12 strain=P0304816.12 na latest Contig Minor Full 2013-04-08 ASM35849v2 IGS GCA_000358495.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/495/GCF_000358495.2_ASM35849v2/ na na na haploid bacteria 5208802 5208802 50.500000 0 169 169 NCBI RefSeq GCF_000358495.2-RS_2025_06_16 2025-06-16 5294 4881 110 na GCF_000358515.2 PRJNA224116 SAMN00829509 AQAY00000000.1 na 1116191 562 Escherichia coli P0304816.15 strain=P0304816.15 na latest Contig Minor Full 2013-04-08 ASM35851v2 IGS GCA_000358515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/515/GCF_000358515.2_ASM35851v2/ na na na haploid bacteria 5181989 5181989 50.500000 0 158 158 NCBI RefSeq GCF_000358515.2-RS_2025_06_15 2025-06-15 5250 4824 115 na GCF_000358535.2 PRJNA224116 SAMN00829510 AQAZ00000000.1 na 1116178 562 Escherichia coli P0304816.2 strain=P0304816.2 na latest Contig Minor Full 2013-04-08 ASM35853v2 IGS GCA_000358535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/535/GCF_000358535.2_ASM35853v2/ na na na haploid bacteria 5182088 5182088 50.500000 0 173 173 NCBI RefSeq GCF_000358535.2-RS_2025_06_15 2025-06-15 5280 4839 114 na GCF_000358555.1 PRJNA224116 SAMN00829536 AQBT00000000.1 na 1116098 562 Escherichia coli p0305293.10 strain=p0305293.10 na latest Contig Major Full 2013-04-08 ASM35855v1 IGS GCA_000358555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/555/GCF_000358555.1_ASM35855v1/ na na na haploid bacteria 5095547 5095547 50.500000 0 189 189 NCBI RefSeq GCF_000358555.1-RS_2025_08_11 2025-08-11 5259 4825 117 na GCF_000358575.2 PRJNA224116 SAMN00829537 AQBU00000000.1 na 1116099 562 Escherichia coli p0305293.11 strain=p0305293.11 na latest Contig Minor Full 2013-04-08 ASM35857v2 IGS GCA_000358575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/575/GCF_000358575.2_ASM35857v2/ na na na haploid bacteria 5018302 5018302 50.500000 0 294 294 NCBI RefSeq GCF_000358575.2-RS_2025_06_15 2025-06-15 5220 4733 115 na GCF_000358595.2 PRJNA224116 SAMN00829538 AQBV00000000.1 na 1116100 562 Escherichia coli p0305293.12 strain=p0305293.12 na latest Contig Minor Full 2013-04-08 ASM35859v2 IGS GCA_000358595.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/595/GCF_000358595.2_ASM35859v2/ na na na haploid bacteria 5090363 5090363 50.500000 0 164 164 NCBI RefSeq GCF_000358595.2-RS_2025_06_15 2025-06-15 5211 4793 115 na GCF_000358615.2 PRJNA224116 SAMN00829540 AQBW00000000.1 na 1116102 562 Escherichia coli p0305293.15 strain=p0305293.15 na latest Contig Minor Full 2013-04-08 ASM35861v2 IGS GCA_000358615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/615/GCF_000358615.2_ASM35861v2/ na na na haploid bacteria 5078350 5078350 50.500000 0 166 166 NCBI RefSeq GCF_000358615.2-RS_2025_06_16 2025-06-16 5217 4781 120 na GCF_000358635.2 PRJNA224116 SAMN00829541 AQBX00000000.1 na 1116090 562 Escherichia coli p0305293.2 strain=p0305293.2 na latest Contig Minor Full 2013-04-08 ASM35863v2 IGS GCA_000358635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/635/GCF_000358635.2_ASM35863v2/ na na na haploid bacteria 5059975 5059975 50.500000 0 151 151 NCBI RefSeq GCF_000358635.2-RS_2025_06_15 2025-06-15 5178 4777 107 na GCF_000358655.2 PRJNA224116 SAMN00829542 AQBY00000000.1 na 1116091 562 Escherichia coli p0305293.3 strain=p0305293.3 na latest Contig Minor Full 2013-04-08 ASM35865v2 IGS GCA_000358655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/655/GCF_000358655.2_ASM35865v2/ na na na haploid bacteria 5063827 5063827 50.500000 0 160 160 NCBI RefSeq GCF_000358655.2-RS_2025_06_15 2025-06-15 5208 4794 112 na GCF_000358675.2 PRJNA224116 SAMN00829543 AQBZ00000000.1 na 1116092 562 Escherichia coli p0305293.4 strain=p0305293.4 na latest Contig Minor Full 2013-04-08 ASM35867v2 IGS GCA_000358675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/675/GCF_000358675.2_ASM35867v2/ na na na haploid bacteria 5065632 5065632 50.500000 0 243 243 NCBI RefSeq GCF_000358675.2-RS_2025_06_16 2025-06-16 5256 4801 117 na GCF_000358695.2 PRJNA224116 SAMN00829547 AQCD00000000.1 na 1116096 562 Escherichia coli p0305293.8 strain=p0305293.8 na latest Contig Minor Full 2013-04-08 ASM35869v2 IGS GCA_000358695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/695/GCF_000358695.2_ASM35869v2/ na na na haploid bacteria 5074720 5074720 50.500000 0 163 163 NCBI RefSeq GCF_000358695.2-RS_2025_06_15 2025-06-15 5206 4779 111 na GCF_000358715.2 PRJNA224116 SAMN00829548 AQCE00000000.1 na 1116097 562 Escherichia coli p0305293.9 strain=p0305293.9 na latest Contig Minor Full 2013-04-08 ASM35871v2 IGS GCA_000358715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/715/GCF_000358715.2_ASM35871v2/ na na na haploid bacteria 4807627 4807627 50.500000 0 193 193 NCBI RefSeq GCF_000358715.2-RS_2025_06_15 2025-06-15 4853 4485 108 na GCF_000358735.1 PRJNA224116 SAMN00829425 APZB00000000.1 na 1116160 562 Escherichia coli P0302308.12 strain=P0302308.12 na latest Contig Major Full 2013-04-08 ASM35873v1 IGS GCA_000358735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/735/GCF_000358735.1_ASM35873v1/ na na na haploid bacteria 5161773 5161773 50.500000 0 197 197 NCBI RefSeq GCF_000358735.1-RS_2025_09_21 2025-09-21 5262 4840 113 na GCF_000358755.2 PRJNA224116 SAMN00829231 APWZ00000000.1 na 1116106 562 Escherichia coli 178850 strain=178850 na latest Contig Minor Full 2013-04-08 ASM35875v2 IGS GCA_000358755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/755/GCF_000358755.2_ASM35875v2/ na na na haploid bacteria 5108134 5108134 51.000000 0 782 782 NCBI RefSeq GCF_000358755.2-RS_2025_06_15 2025-06-15 5538 4915 118 na GCF_000358775.2 PRJNA224116 SAMN00829406 APYX00000000.1 na 1116070 562 Escherichia coli P0301867.7 strain=P0301867.7 na latest Contig Minor Full 2013-04-08 ASM35877v2 IGS GCA_000358775.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/775/GCF_000358775.2_ASM35877v2/ na na na haploid bacteria 5203444 5203444 50.500000 0 134 134 NCBI RefSeq GCF_000358775.2-RS_2025_06_15 2025-06-15 5260 4795 112 na GCF_000358795.2 PRJNA224116 SAMN00829370 APYR00000000.1 na 1116054 562 Escherichia coli P0299917.8 strain=P0299917.8 na latest Contig Minor Full 2013-04-08 ASM35879v2 IGS GCA_000358795.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/795/GCF_000358795.2_ASM35879v2/ na na na haploid bacteria 5314119 5314119 50.500000 0 183 183 NCBI RefSeq GCF_000358795.2-RS_2025_06_16 2025-06-16 5480 5030 122 na GCF_000358815.1 PRJNA224116 SAMN00829343 APXT00000000.1 na 1116150 562 Escherichia coli P0298942.14 strain=P0298942.14 na latest Contig Major Full 2013-04-08 ASM35881v1 IGS GCA_000358815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/815/GCF_000358815.1_ASM35881v1/ na na na haploid bacteria 5064122 5064122 50.500000 0 205 205 NCBI RefSeq GCF_000358815.1-RS_2025_08_12 2025-08-12 5302 4738 114 na GCF_000358835.2 PRJNA224116 SAMN00829403 APYU00000000.1 na 1116067 562 Escherichia coli P0301867.3 strain=P0301867.3 na latest Contig Minor Full 2013-04-08 ASM35883v2 IGS GCA_000358835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/835/GCF_000358835.2_ASM35883v2/ na na na haploid bacteria 5159551 5159551 50.500000 0 133 133 NCBI RefSeq GCF_000358835.2-RS_2025_06_15 2025-06-15 5252 4792 115 na GCF_000358855.2 PRJNA224116 SAMN00829405 APYW00000000.1 na 1116069 562 Escherichia coli P0301867.5 strain=P0301867.5 na latest Contig Minor Full 2013-04-08 ASM35885v2 IGS GCA_000358855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/855/GCF_000358855.2_ASM35885v2/ na na na haploid bacteria 5205842 5205842 50.500000 0 135 135 NCBI RefSeq GCF_000358855.2-RS_2025_06_16 2025-06-16 5295 4805 108 na GCF_000358875.1 PRJNA224116 SAMN00829420 APYZ00000000.1 na 1116158 562 Escherichia coli P0302308.10 strain=P0302308.10 na latest Contig Major Full 2013-04-08 ASM35887v1 IGS GCA_000358875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/875/GCF_000358875.1_ASM35887v1/ na na na haploid bacteria 5222034 5222034 50.500000 0 142 142 NCBI RefSeq GCF_000358875.1-RS_2025_08_11 2025-08-11 5253 4863 116 na GCF_000358895.1 PRJNA224116 SAMN00829003 APWY00000000.1 na 1116107 562 Escherichia coli 178200 strain=178200 na latest Contig Major Full 2013-04-08 ASM35889v1 IGS GCA_000358895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/895/GCF_000358895.1_ASM35889v1/ na na na haploid bacteria 4615501 4615501 51.500000 0 433 433 NCBI RefSeq GCF_000358895.1-RS_2025_08_11 2025-08-11 4675 4298 108 na GCF_000358915.1 PRJNA224116 SAMN00829342 APXS00000000.1 na 1116149 562 Escherichia coli P0298942.12 strain=P0298942.12 na latest Contig Major Full 2013-04-08 ASM35891v1 IGS GCA_000358915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/915/GCF_000358915.1_ASM35891v1/ na na na haploid bacteria 5048743 5048743 50.500000 0 202 202 NCBI RefSeq GCF_000358915.1-RS_2025_08_11 2025-08-11 5282 4744 117 na GCF_000358935.2 PRJNA224116 SAMN00829428 APZD00000000.1 na 1116162 562 Escherichia coli P0302308.14 strain=P0302308.14 na latest Contig Minor Full 2013-04-08 ASM35893v2 IGS GCA_000358935.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/935/GCF_000358935.2_ASM35893v2/ na na na haploid bacteria 5203135 5203135 50.500000 0 157 157 NCBI RefSeq GCF_000358935.2-RS_2025_06_16 2025-06-16 5244 4845 104 na GCF_000358955.2 PRJNA224116 SAMN00829514 AQBC00000000.1 na 1116181 562 Escherichia coli P0304816.5 strain=P0304816.5 na latest Contig Minor Full 2013-04-08 ASM35895v2 IGS GCA_000358955.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/955/GCF_000358955.2_ASM35895v2/ na na na haploid bacteria 5264157 5264157 50.500000 0 196 196 NCBI RefSeq GCF_000358955.2-RS_2025_06_17 2025-06-17 5372 4916 112 na GCF_000358975.2 PRJNA224116 SAMN00829426 APZC00000000.1 na 1116161 562 Escherichia coli P0302308.13 strain=P0302308.13 na latest Contig Minor Full 2013-04-08 ASM35897v2 IGS GCA_000358975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/975/GCF_000358975.2_ASM35897v2/ na na na haploid bacteria 5105197 5105197 51.000000 0 360 360 NCBI RefSeq GCF_000358975.2-RS_2025_06_16 2025-06-16 5255 4788 116 na GCF_000358995.1 PRJNA224116 SAMN00829508 AQAX00000000.1 na 1116190 562 Escherichia coli P0304816.14 strain=P0304816.14 na latest Contig Major Full 2013-04-08 ASM35899v1 IGS GCA_000358995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/358/995/GCF_000358995.1_ASM35899v1/ na na na haploid bacteria 5170822 5170822 50.500000 0 156 156 NCBI RefSeq GCF_000358995.1-RS_2025_08_11 2025-08-11 5226 4816 111 na GCF_000359015.2 PRJNA224116 SAMN00829511 AQBA00000000.1 na 1116179 562 Escherichia coli P0304816.3 strain=P0304816.3 na latest Contig Minor Full 2013-04-08 ASM35901v2 IGS GCA_000359015.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/015/GCF_000359015.2_ASM35901v2/ na na na haploid bacteria 5223543 5223543 50.500000 0 176 176 NCBI RefSeq GCF_000359015.2-RS_2025_06_17 2025-06-17 5325 4885 114 na GCF_000359035.2 PRJNA224116 SAMN00829512 AQBB00000000.1 na 1116180 562 Escherichia coli P0304816.4 strain=P0304816.4 na latest Contig Minor Full 2013-04-08 ASM35903v2 IGS GCA_000359035.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/035/GCF_000359035.2_ASM35903v2/ na na na haploid bacteria 5201510 5201510 50.500000 0 168 168 NCBI RefSeq GCF_000359035.2-RS_2025_06_16 2025-06-16 5322 4869 112 na GCF_000359055.2 PRJNA224116 SAMN00829544 AQCA00000000.1 na 1116093 562 Escherichia coli p0305293.5 strain=p0305293.5 na latest Contig Minor Full 2013-04-08 ASM35905v2 IGS GCA_000359055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/055/GCF_000359055.2_ASM35905v2/ na na na haploid bacteria 5061377 5061377 50.500000 0 252 252 NCBI RefSeq GCF_000359055.2-RS_2025_06_16 2025-06-16 5252 4792 114 na GCF_000359075.1 PRJNA224116 SAMN00829545 AQCB00000000.1 na 1116094 562 Escherichia coli p0305293.6 strain=p0305293.6 na latest Contig Major Full 2013-04-08 ASM35907v1 IGS GCA_000359075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/075/GCF_000359075.1_ASM35907v1/ na na na haploid bacteria 4974660 4974660 51.000000 0 406 406 NCBI RefSeq GCF_000359075.1-RS_2025_08_11 2025-08-11 5205 4713 115 na GCF_000359095.2 PRJNA224116 SAMN00829546 AQCC00000000.1 na 1116095 562 Escherichia coli p0305293.7 strain=p0305293.7 na latest Contig Minor Full 2013-04-08 ASM35909v2 IGS GCA_000359095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/095/GCF_000359095.2_ASM35909v2/ na na na haploid bacteria 5065641 5065641 50.500000 0 194 194 NCBI RefSeq GCF_000359095.2-RS_2025_06_15 2025-06-15 5250 4777 115 na GCF_000359125.1 PRJNA224116 SAMEA2272721 CAAF000000000.1 na 1297570 1297570 Mesorhizobium sp. STM 4661 strain=STM 4661 na latest Contig Major Full 2013-04-03 ASM35912v1 Genoscope CEA GCA_000359125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/125/GCF_000359125.1_ASM35912v1/ na na na haploid bacteria 6547395 6547395 62.500000 0 89 89 NCBI RefSeq GCF_000359125.1-RS_2024_06_01 2024-06-01 6361 6122 58 na GCF_000359145.2 PRJNA224116 SAMEA2272116 CAAG000000000.2 na 1293896 2039 Tropheryma whipplei str. Dig15 strain=Dig15 na latest Scaffold Major Full 2013-12-19 G158 ebi GCA_000359145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/145/GCF_000359145.2_G158/ na na na haploid bacteria 927582 883039 46.500000 0 1 176 NCBI RefSeq GCF_000359145.2-RS_2026_04_02 2026-04-02 865 805 48 na GCF_000359165.2 PRJNA224116 SAMEA2272623 CAAH000000000.2 na 1293897 2039 Tropheryma whipplei str. Endo32 strain=Endo32 na latest Scaffold Major Full 2013-12-19 G159 ebi GCA_000359165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/165/GCF_000359165.2_G159/ na na na haploid bacteria 927567 882424 46.500000 0 1 193 NCBI RefSeq GCF_000359165.2-RS_2026_04_02 2026-04-02 856 799 49 na GCF_000359185.2 PRJNA224116 SAMEA2271947 CAAO000000000.2 na 1294027 2039 Tropheryma whipplei str. Slow2 strain=Slow2 na latest Scaffold Major Full 2013-12-19 G160 ebi GCA_000359185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/185/GCF_000359185.2_G160/ na na na haploid bacteria 927621 881353 46.500000 0 1 216 NCBI RefSeq GCF_000359185.2-RS_2026_04_02 2026-04-02 857 791 48 na GCF_000359205.2 PRJNA224116 SAMEA2272265 CAUP000000000.2 na 1294028 2039 Tropheryma whipplei str. Dig7 strain=Dig7 na latest Scaffold Major Full 2013-12-19 G161 ebi GCA_000359205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/205/GCF_000359205.2_G161/ na na na haploid bacteria 927564 881672 46.500000 0 1 188 NCBI RefSeq GCF_000359205.2-RS_2026_04_02 2026-04-02 861 800 49 na GCF_000359225.2 PRJNA224116 SAMEA2272751 CAUQ000000000.2 na 1294029 2039 Tropheryma whipplei str. Dig10 strain=Dig10 na latest Scaffold Major Full 2013-12-19 G162 ebi GCA_000359225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/225/GCF_000359225.2_G162/ na na na haploid bacteria 927515 884551 46.500000 0 1 152 NCBI RefSeq GCF_000359225.2-RS_2026_04_02 2026-04-02 866 809 49 na GCF_000359245.2 PRJNA224116 SAMEA2272435 CAUS000000000.2 na 1294031 2039 Tropheryma whipplei str. Endo27 strain=Endo27 na latest Scaffold Major Full 2013-12-19 G164 ebi GCA_000359245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/245/GCF_000359245.2_G164/ na na na haploid bacteria 927598 882107 46.500000 0 1 189 NCBI RefSeq GCF_000359245.2-RS_2026_04_02 2026-04-02 864 806 49 na GCF_000359265.2 PRJNA224116 SAMEA2272646 CAUT000000000.2 na 1294032 2039 Tropheryma whipplei str. Sali28 strain=Sali28 na latest Scaffold Major Full 2013-12-19 G165 ebi GCA_000359265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/265/GCF_000359265.2_G165/ na na na haploid bacteria 927465 886484 46.500000 0 1 141 NCBI RefSeq GCF_000359265.2-RS_2026_04_02 2026-04-02 868 812 49 na GCF_000359285.2 PRJNA224116 SAMEA2272300 CAUU000000000.2 na 1294033 2039 Tropheryma whipplei str. Art29 strain=Art29 na latest Scaffold Major Full 2013-12-19 G166 ebi GCA_000359285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/285/GCF_000359285.2_G166/ na na na haploid bacteria 927595 881982 46.500000 0 1 179 NCBI RefSeq GCF_000359285.2-RS_2026_04_02 2026-04-02 858 798 48 na GCF_000359305.2 PRJNA224116 SAMEA2272530 CAUV000000000.2 na 1294034 2039 Tropheryma whipplei str. Pneumo30 strain=Pneumo30 na latest Scaffold Major Full 2013-12-19 G167 ebi GCA_000359305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/305/GCF_000359305.2_G167/ na na na haploid bacteria 927553 884309 46.500000 0 1 169 NCBI RefSeq GCF_000359305.2-RS_2026_04_02 2026-04-02 859 801 48 na GCF_000359325.1 PRJNA224116 SAMEA2272424 CAUW000000000.1 na 1294035 2039 Tropheryma whipplei str. DigADP25 strain=DigADP25 na latest Contig Major Full 2013-04-03 ASM35932v1 ebi GCA_000359325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/325/GCF_000359325.1_ASM35932v1/ na na na haploid bacteria 883649 883649 46.500000 0 134 134 NCBI RefSeq GCF_000359325.1-RS_2026_01_30 2026-01-30 861 806 49 na GCF_000359345.1 PRJNA224116 SAMEA2272650 CAUX000000000.1 na 1294036 2039 Tropheryma whipplei str. Neuro20 strain=Neuro20 na latest Contig Major Full 2013-04-03 ASM35934v1 ebi GCA_000359345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/345/GCF_000359345.1_ASM35934v1/ na na na haploid bacteria 883582 883582 46.500000 0 125 125 NCBI RefSeq GCF_000359345.1-RS_2026_01_30 2026-01-30 867 807 48 na GCF_000359365.1 PRJNA224116 SAMEA2272148 CAUY000000000.1 na 1294037 2039 Tropheryma whipplei str. Dig9 strain=Dig9 na latest Contig Major Full 2013-04-03 ASM35936v1 ebi GCA_000359365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/365/GCF_000359365.1_ASM35936v1/ na na na haploid bacteria 880115 880115 46.500000 0 146 146 NCBI RefSeq GCF_000359365.1-RS_2026_01_30 2026-01-30 860 799 48 na GCF_000359385.1 PRJNA224116 SAMEA2272748 CAVA000000000.1 na 1294038 2039 Tropheryma whipplei str. DigMusc17 strain=DigMusc17 na latest Contig Major Full 2013-04-03 ASM35938v1 ebi GCA_000359385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/385/GCF_000359385.1_ASM35938v1/ na na na haploid bacteria 884564 884564 46.500000 0 128 128 NCBI RefSeq GCF_000359385.1-RS_2026_01_30 2026-01-30 864 805 49 na GCF_000359405.1 PRJNA224116 SAMEA2272123 CAVB000000000.1 na 1294039 2039 Tropheryma whipplei str. Bcu26 strain=Bcu26 na latest Contig Major Full 2013-04-03 ASM35940v1 ebi GCA_000359405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/405/GCF_000359405.1_ASM35940v1/ na na na haploid bacteria 880271 880271 46.500000 0 138 138 NCBI RefSeq GCF_000359405.1-RS_2026_01_30 2026-01-30 866 811 48 na GCF_000359425.1 PRJNA224116 SAMEA2272511 CAVC000000000.1 na 1297866 1392 Bacillus anthracis str. Sen2Col2 strain=Sen2Col2 na latest Contig Major Full 2013-04-03 ASM35942v1 ebi GCA_000359425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/425/GCF_000359425.1_ASM35942v1/ na na na haploid bacteria 5174112 5174112 35.000000 0 44 44 NCBI RefSeq GCF_000359425.1-RS_2026_02_15 2026-02-15 5507 5018 114 na GCF_000359445.1 PRJNA224116 SAMEA2272292 CAVD000000000.1 na 1297867 1392 Bacillus anthracis str. Sen3 strain=Sen3 na latest Contig Major Full 2013-04-03 ASM35944v1 ebi GCA_000359445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/445/GCF_000359445.1_ASM35944v1/ na na na haploid bacteria 5173792 5173792 35.000000 0 50 50 NCBI RefSeq GCF_000359445.1-RS_2026_02_15 2026-02-15 5489 4994 109 na GCF_000359465.1 PRJNA224116 SAMEA2272630 CAVE000000000.1 na 1297868 1392 Bacillus anthracis str. Gmb1 strain=Gmb1 na latest Contig Major Full 2013-04-03 ASM35946v1 ebi GCA_000359465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/465/GCF_000359465.1_ASM35946v1/ na na na haploid bacteria 5175077 5175077 35.000000 0 39 39 NCBI RefSeq GCF_000359465.1-RS_2026_02_15 2026-02-15 5513 5004 118 na GCF_000359505.1 PRJNA224116 SAMN02603669 na na 1280938 287 Pseudomonas aeruginosa B136-33 strain=B136-33 na latest Complete Genome Major Full 2013-04-09 ASM35950v1 National Tsing Hua University GCA_000359505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/505/GCF_000359505.1_ASM35950v1/ na na na haploid bacteria 6421010 6421010 66.500000 1 1 1 NCBI RefSeq GCF_000359505.1-RS_2024_12_27 2024-12-27 5936 5808 80 na GCF_000359565.1 PRJNA224116 SAMN02471971 APMD00000000.1 na 1295076 287 Pseudomonas aeruginosa PA45 strain=PA45 na latest Contig Major Full 2013-04-09 PA45 CIBIO (Unitn) GCA_000359565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/565/GCF_000359565.1_PA45/ na na na haploid bacteria 6615955 6615955 66.500000 0 124 124 NCBI RefSeq GCF_000359565.1-RS_2025_04_26 2025-04-26 6260 6093 65 23704188 GCF_000359585.1 PRJNA224116 SAMN02470572 APMH00000000.1 na 1121342 1519 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain=ATCC 25755 na latest Contig Major Full 2013-04-09 ATCC25755 Nanjing university of technology GCA_000359585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/585/GCF_000359585.1_ATCC25755/ na assembly from type material na haploid bacteria 3010696 3010696 31.000000 0 76 76 NCBI RefSeq GCF_000359585.1-RS_2026_04_14 2026-04-14 3043 2945 55 23723404 GCF_000359605.1 PRJNA224116 SAMN02470131 APML00000000.1 reference genome 1308866 470864 Gracilibacillus halophilus YIM-C55.5 strain=YIM-C55.5 na latest Contig Major Full 2013-04-09 ASM35960v1 King Abdullah University fo Science and Technology GCA_000359605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/605/GCF_000359605.1_ASM35960v1/ na assembly from type material na haploid bacteria 3034425 3034425 38.000000 0 104 104 NCBI RefSeq GCF_000359605.1-RS_2026_03_30 2026-03-30 3100 2910 36 na GCF_000359625.1 PRJNA224116 SAMD00060986 na na 1001583 1580 Levilactobacillus brevis KB290 strain=KB290 na latest Complete Genome Major Full 2013-03-28 ASM35962v1 KAGOME CO., LTD., Research Institute GCA_000359625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/625/GCF_000359625.1_ASM35962v1/ na na na haploid bacteria 2587877 2587877 45.500000 10 10 10 NCBI RefSeq GCF_000359625.1-RS_2026_04_20 2026-04-20 2627 2489 82 23544154 GCF_000359645.1 PRJNA224116 SAMN00778850 AOTW00000000.1 na 992035 210 Helicobacter pylori Hp A-11 strain=Hp A-11 na latest Contig Major Full 2013-04-09 ASM35964v1 Institute for Genome Sciences GCA_000359645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/645/GCF_000359645.1_ASM35964v1/ na na na haploid bacteria 1668342 1668342 39.000000 0 1 1 NCBI RefSeq GCF_000359645.1-RS_2026_02_11 2026-02-11 1610 1466 46 na GCF_000359665.1 PRJNA224116 SAMN00792159 AIVJ00000000.1 na 1156997 1280 Staphylococcus aureus HI010B strain=HI010B na latest Contig Major Full 2013-04-09 Stap_aure_HI010B_V1 Broad Institute GCA_000359665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/665/GCF_000359665.1_Stap_aure_HI010B_V1/ na na na haploid bacteria 2889536 2889536 32.500000 0 23 23 NCBI RefSeq GCF_000359665.1-RS_2025_01_09 2025-01-09 2921 2758 70 na GCF_000359705.1 PRJNA245152 SAMN00120049 AIHT00000000.1 reference genome 671987 93612 Exserohilum turcica Et28A strain=Et28A na latest Scaffold Major Full 2013-04-25 Setospaeria trucica Et28A v1.0 JGI GCA_000359705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/705/GCF_000359705.1_Setospaeria_trucica_Et28A_v1.0/ na na na haploid fungi 43013545 38252428 51.500000 0 407 2126 JGI Annotation submitted by JGI 2020-02-07 11835 11687 146 23236275;23357949 GCF_000359725.1 PRJNA224116 SAMN02470883 AOSP00000000.1 na 1293574 470 Acinetobacter baumannii 48055 strain=48055 na latest Contig Major Full 2013-04-09 AB48055 SCELSE GCA_000359725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/725/GCF_000359725.1_AB48055/ na na na haploid bacteria 4049562 4049562 39.000000 0 135 135 NCBI RefSeq GCF_000359725.1-RS_2026_01_30 2026-01-30 3955 3794 67 23538992 GCF_000359745.1 PRJNA224116 SAMN02470251 AQHN00000000.1 reference genome 363754 1353277 Rhizobium freirei PRF 81 strain=PRF 81 na latest Contig Major Full 2013-04-10 Rhizobium sp. Embrapa GCA_000359745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/745/GCF_000359745.1_Rhizobium_sp./ na assembly from type material na haploid bacteria 7083871 7083871 60.000000 2 96 96 NCBI RefSeq GCF_000359745.1-RS_2026_03_30 2026-03-30 6713 6488 65 23270491 GCF_000359765.1 PRJNA224116 SAMN00792137 AIVH00000000.1 na 1156995 1280 Staphylococcus aureus HI010 strain=HI010 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI010_V1 Broad Institute GCA_000359765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/765/GCF_000359765.1_Stap_aure_HI010_V1/ na na na haploid bacteria 2903760 2903235 32.500000 0 4 6 NCBI RefSeq GCF_000359765.1-RS_2026_03_09 2026-03-09 2931 2760 80 na GCF_000359785.1 PRJNA224116 SAMN00792127 AIVP00000000.1 na 1157003 1280 Staphylococcus aureus HI013 strain=HI013 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI013_V1 Broad Institute GCA_000359785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/785/GCF_000359785.1_Stap_aure_HI013_V1/ na na na haploid bacteria 2946333 2942525 32.500000 0 5 13 NCBI RefSeq GCF_000359785.1-RS_2025_01_09 2025-01-09 3001 2826 81 na GCF_000359805.1 PRJNA224116 SAMN00792168 AIVL00000000.1 na 1156999 1280 Staphylococcus aureus HI022 strain=HI022 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI022_V1 Broad Institute GCA_000359805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/805/GCF_000359805.1_Stap_aure_HI022_V1/ na na na haploid bacteria 2845606 2842691 33.000000 0 3 10 NCBI RefSeq GCF_000359805.1-RS_2026_03_09 2026-03-09 2866 2705 80 na GCF_000359825.1 PRJNA224116 SAMN00792148 AIVI00000000.1 na 1156996 1280 Staphylococcus aureus HI049B strain=HI049B na latest Scaffold Major Full 2013-04-12 Stap_aure_HI049B_V1 Broad Institute GCA_000359825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/825/GCF_000359825.1_Stap_aure_HI049B_V1/ na na na haploid bacteria 2915189 2909131 32.500000 0 3 11 NCBI RefSeq GCF_000359825.1-RS_2025_01_09 2025-01-09 2933 2758 79 na GCF_000359845.1 PRJNA224116 SAMN00792169 AIVM00000000.1 na 1157000 1280 Staphylococcus aureus HI049C strain=HI049C na latest Scaffold Major Full 2013-04-12 Stap_aure_HI049C_V1 Broad Institute GCA_000359845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/845/GCF_000359845.1_Stap_aure_HI049C_V1/ na na na haploid bacteria 2915328 2912098 32.500000 0 3 10 NCBI RefSeq GCF_000359845.1-RS_2025_01_09 2025-01-09 2942 2765 79 na GCF_000359865.1 PRJNA224116 SAMN00792126 AIVG00000000.1 na 1156994 1280 Staphylococcus aureus HI049 strain=HI049 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI049_V1 Broad Institute GCA_000359865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/865/GCF_000359865.1_Stap_aure_HI049_V1/ na na na haploid bacteria 2900844 2896459 32.500000 0 4 10 NCBI RefSeq GCF_000359865.1-RS_2026_03_09 2026-03-09 2927 2755 80 na GCF_000359885.1 PRJNA224116 SAMN00792171 AIVO00000000.1 na 1157002 1280 Staphylococcus aureus HI111 strain=HI111 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI111_V1 Broad Institute GCA_000359885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/885/GCF_000359885.1_Stap_aure_HI111_V1/ na na na haploid bacteria 2862860 2851586 32.500000 0 3 9 NCBI RefSeq GCF_000359885.1-RS_2025_01_09 2025-01-09 2875 2706 76 na GCF_000359905.1 PRJNA224116 SAMN00792170 AIVN00000000.1 na 1157001 1280 Staphylococcus aureus HI168 strain=HI168 na latest Scaffold Major Full 2013-04-12 Stap_aure_HI168_V1 Broad Institute GCA_000359905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/905/GCF_000359905.1_Stap_aure_HI168_V1/ na na na haploid bacteria 2968142 2962459 32.500000 0 6 16 NCBI RefSeq GCF_000359905.1-RS_2026_02_24 2026-02-24 3017 2846 80 na GCF_000359925.1 PRJNA224116 SAMN00792167 AIVK00000000.1 na 1156998 1280 Staphylococcus aureus HIF003_B2N-C strain=HIF003_B2N-C na latest Scaffold Major Full 2013-04-12 Stap_aure_HIF003_B2N-C_V1 Broad Institute GCA_000359925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/925/GCF_000359925.1_Stap_aure_HIF003_B2N-C_V1/ na na na haploid bacteria 2756892 2752004 33.000000 0 2 8 NCBI RefSeq GCF_000359925.1-RS_2025_01_09 2025-01-09 2739 2587 79 na GCF_000359945.1 PRJNA224116 SAMN00792128 AIVQ00000000.1 na 1157004 1280 Staphylococcus aureus M0001 strain=M0001 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0001_V1 Broad Institute GCA_000359945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/945/GCF_000359945.1_Stap_aure_M0001_V1/ na na na haploid bacteria 2882253 2879018 33.000000 0 25 34 NCBI RefSeq GCF_000359945.1-RS_2025_01_09 2025-01-09 2923 2766 76 na GCF_000359965.1 PRJNA224116 SAMN00809157 AJBY00000000.1 na 1158507 1280 Staphylococcus aureus M0006 strain=M0006 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0006_V1 Broad Institute GCA_000359965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/965/GCF_000359965.1_Stap_aure_M0006_V1/ na na na haploid bacteria 2941847 2912339 33.000000 0 10 31 NCBI RefSeq GCF_000359965.1-RS_2026_03_09 2026-03-09 2957 2803 75 na GCF_000359985.1 PRJNA224116 SAMN00792129 AIVR00000000.1 na 1157005 1280 Staphylococcus aureus M0029 strain=M0029 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0029_V1 Broad Institute GCA_000359985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/359/985/GCF_000359985.1_Stap_aure_M0029_V1/ na na na haploid bacteria 2891893 2889538 33.000000 0 3 9 NCBI RefSeq GCF_000359985.1-RS_2025_01_09 2025-01-09 2913 2752 82 na GCF_000360005.1 PRJNA224116 SAMN00792130 AIVS00000000.1 na 1157006 1280 Staphylococcus aureus M0035 strain=M0035 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0035_V1 Broad Institute GCA_000360005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/005/GCF_000360005.1_Stap_aure_M0035_V1/ na na na haploid bacteria 2893032 2888311 33.000000 0 4 13 NCBI RefSeq GCF_000360005.1-RS_2026_03_09 2026-03-09 2896 2735 79 na GCF_000360025.1 PRJNA224116 SAMN00792131 AIVT00000000.1 na 1157007 1280 Staphylococcus aureus M0045 strain=M0045 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0045_V1 Broad Institute GCA_000360025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/025/GCF_000360025.1_Stap_aure_M0045_V1/ na na na haploid bacteria 2954419 2937805 33.000000 0 7 27 NCBI RefSeq GCF_000360025.1-RS_2025_01_09 2025-01-09 2988 2821 82 na GCF_000360045.1 PRJNA224116 SAMN00809158 AJBZ00000000.1 na 1158508 1280 Staphylococcus aureus M0055 strain=M0055 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0055_V1 Broad Institute GCA_000360045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/045/GCF_000360045.1_Stap_aure_M0055_V1/ na na na haploid bacteria 2960379 2912229 32.500000 0 5 39 NCBI RefSeq GCF_000360045.1-RS_2025_01_09 2025-01-09 2947 2788 71 na GCF_000360065.1 PRJNA224116 SAMN00809159 AJCA00000000.1 na 1157008 1280 Staphylococcus aureus M0060 strain=M0060 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0060_V1 Broad Institute GCA_000360065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/065/GCF_000360065.1_Stap_aure_M0060_V1/ na na na haploid bacteria 2922670 2901363 33.000000 0 12 30 NCBI RefSeq GCF_000360065.1-RS_2026_03_09 2026-03-09 2936 2771 80 na GCF_000360085.1 PRJNA224116 SAMN00792133 AIVV00000000.1 na 1157009 1280 Staphylococcus aureus M0066 strain=M0066 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0066_V1 Broad Institute GCA_000360085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/085/GCF_000360085.1_Stap_aure_M0066_V1/ na na na haploid bacteria 2917552 2912558 33.000000 0 6 18 NCBI RefSeq GCF_000360085.1-RS_2025_01_09 2025-01-09 2961 2804 81 na GCF_000360105.1 PRJNA224116 SAMN00809160 AJCB00000000.1 na 1158509 1280 Staphylococcus aureus M0077 strain=M0077 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0077_V1 Broad Institute GCA_000360105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/105/GCF_000360105.1_Stap_aure_M0077_V1/ na na na haploid bacteria 2937865 2898661 33.000000 0 7 36 NCBI RefSeq GCF_000360105.1-RS_2025_02_04 2025-02-04 2934 2777 70 na GCF_000360125.1 PRJNA224116 SAMN00792134 AIVW00000000.1 na 1157010 1280 Staphylococcus aureus M0102 strain=M0102 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0102_V1 Broad Institute GCA_000360125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/125/GCF_000360125.1_Stap_aure_M0102_V1/ na na na haploid bacteria 2834946 2828936 33.000000 0 6 7 NCBI RefSeq GCF_000360125.1-RS_2025_01_09 2025-01-09 2839 2678 80 na GCF_000360145.1 PRJNA224116 SAMN00792135 AIVX00000000.1 na 1157011 1280 Staphylococcus aureus M0103 strain=M0103 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0103_V1 Broad Institute GCA_000360145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/145/GCF_000360145.1_Stap_aure_M0103_V1/ na na na haploid bacteria 2931245 2903440 33.000000 0 11 33 NCBI RefSeq GCF_000360145.1-RS_2026_03_09 2026-03-09 2936 2767 81 na GCF_000360165.1 PRJNA224116 SAMN01125832 ANZJ00000000.1 na 1224919 1280 Staphylococcus aureus M0104 strain=M0104 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0104_V1 Broad Institute GCA_000360165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/165/GCF_000360165.1_Stap_aure_M0104_V1/ na na na haploid bacteria 2935513 2891713 33.000000 0 10 28 NCBI RefSeq GCF_000360165.1-RS_2026_03_09 2026-03-09 2935 2777 79 na GCF_000360185.1 PRJNA224116 SAMN00809161 AJCC00000000.1 na 1158510 1280 Staphylococcus aureus M0108 strain=M0108 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0108_V1 Broad Institute GCA_000360185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/185/GCF_000360185.1_Stap_aure_M0108_V1/ na na na haploid bacteria 2855322 2844452 33.000000 0 5 21 NCBI RefSeq GCF_000360185.1-RS_2025_01_30 2025-01-30 2867 2707 78 na GCF_000360205.1 PRJNA224116 SAMN00809162 AJCD00000000.1 na 1158511 1280 Staphylococcus aureus M0144 strain=M0144 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0144_V1 Broad Institute GCA_000360205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/205/GCF_000360205.1_Stap_aure_M0144_V1/ na na na haploid bacteria 2927732 2892869 33.000000 0 5 23 NCBI RefSeq GCF_000360205.1-RS_2026_03_09 2026-03-09 2934 2775 78 na GCF_000360225.1 PRJNA224116 SAMN00792136 AIVY00000000.1 na 1157012 1280 Staphylococcus aureus M0150 strain=M0150 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0150_V1 Broad Institute GCA_000360225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/225/GCF_000360225.1_Stap_aure_M0150_V1/ na na na haploid bacteria 2983845 2939169 33.000000 0 7 37 NCBI RefSeq GCF_000360225.1-RS_2025_01_09 2025-01-09 2992 2819 85 na GCF_000360245.1 PRJNA224116 SAMN00809163 AJCE00000000.1 na 1158512 1280 Staphylococcus aureus M0154 strain=M0154 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0154_V1 Broad Institute GCA_000360245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/245/GCF_000360245.1_Stap_aure_M0154_V1/ na na na haploid bacteria 2858079 2850796 33.000000 0 11 20 NCBI RefSeq GCF_000360245.1-RS_2026_03_09 2026-03-09 2879 2722 80 na GCF_000360265.1 PRJNA224116 SAMN01125833 ANZK00000000.1 na 1224920 1280 Staphylococcus aureus M0171 strain=M0171 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0171_V1 Broad Institute GCA_000360265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/265/GCF_000360265.1_Stap_aure_M0171_V1/ na na na haploid bacteria 2941800 2910537 33.000000 0 9 28 NCBI RefSeq GCF_000360265.1-RS_2026_03_09 2026-03-09 2949 2779 83 na GCF_000360285.1 PRJNA224116 SAMN00792138 AIVZ00000000.1 na 1157013 1280 Staphylococcus aureus M0173 strain=M0173 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0173_V1 Broad Institute GCA_000360285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/285/GCF_000360285.1_Stap_aure_M0173_V1/ na na na haploid bacteria 2882188 2869791 33.000000 0 4 14 NCBI RefSeq GCF_000360285.1-RS_2025_01_09 2025-01-09 2887 2723 81 na GCF_000360305.1 PRJNA224116 SAMN00809164 AJCF00000000.1 na 1158513 1280 Staphylococcus aureus M0177 strain=M0177 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0177_V1 Broad Institute GCA_000360305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/305/GCF_000360305.1_Stap_aure_M0177_V1/ na na na haploid bacteria 2860798 2847532 33.000000 0 6 18 NCBI RefSeq GCF_000360305.1-RS_2025_01_30 2025-01-30 2868 2721 73 na GCF_000360325.1 PRJNA224116 SAMN00792139 AIWA00000000.1 na 1157014 1280 Staphylococcus aureus M0192 strain=M0192 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0192_V1 Broad Institute GCA_000360325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/325/GCF_000360325.1_Stap_aure_M0192_V1/ na na na haploid bacteria 2838711 2837608 33.000000 0 4 7 NCBI RefSeq GCF_000360325.1-RS_2025_01_09 2025-01-09 2826 2673 81 na GCF_000360345.1 PRJNA224116 SAMN00792140 AIWB00000000.1 na 1157015 1280 Staphylococcus aureus M0197 strain=M0197 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0197_V1 Broad Institute GCA_000360345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/345/GCF_000360345.1_Stap_aure_M0197_V1/ na na na haploid bacteria 3000001 2949515 33.000000 0 8 33 NCBI RefSeq GCF_000360345.1-RS_2026_03_09 2026-03-09 3006 2834 83 na GCF_000360365.1 PRJNA224116 SAMN00809165 AJCG00000000.1 na 1158514 1280 Staphylococcus aureus M0200 strain=M0200 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0200_V1 Broad Institute GCA_000360365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/365/GCF_000360365.1_Stap_aure_M0200_V1/ na na na haploid bacteria 2932026 2902138 33.000000 0 13 36 NCBI RefSeq GCF_000360365.1-RS_2025_01_29 2025-01-29 2949 2784 79 na GCF_000360385.1 PRJNA224116 SAMN01125834 ANZL00000000.1 na 1224921 1280 Staphylococcus aureus M0210 strain=M0210 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0210_V1 Broad Institute GCA_000360385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/385/GCF_000360385.1_Stap_aure_M0210_V1/ na na na haploid bacteria 2876719 2853896 33.000000 0 5 21 NCBI RefSeq GCF_000360385.1-RS_2025_01_09 2025-01-09 2853 2693 77 na GCF_000360405.1 PRJNA224116 SAMN00809167 AJCH00000000.1 na 1158515 1280 Staphylococcus aureus M0212 strain=M0212 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0212_V1 Broad Institute GCA_000360405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/405/GCF_000360405.1_Stap_aure_M0212_V1/ na na na haploid bacteria 2891952 2888562 33.000000 0 5 12 NCBI RefSeq GCF_000360405.1-RS_2026_03_09 2026-03-09 2904 2750 79 na GCF_000360425.1 PRJNA224116 SAMN01125835 ANZM00000000.1 na 1224922 1280 Staphylococcus aureus M0213 strain=M0213 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0213_V1 Broad Institute GCA_000360425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/425/GCF_000360425.1_Stap_aure_M0213_V1/ na na na haploid bacteria 2866462 2835558 32.500000 0 4 22 NCBI RefSeq GCF_000360425.1-RS_2025_01_09 2025-01-09 2860 2712 65 na GCF_000360445.1 PRJNA224116 SAMN00809168 AJCI00000000.1 na 1158516 1280 Staphylococcus aureus M0216 strain=M0216 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0216_V1 Broad Institute GCA_000360445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/445/GCF_000360445.1_Stap_aure_M0216_V1/ na na na haploid bacteria 2883951 2862075 33.000000 0 4 17 NCBI RefSeq GCF_000360445.1-RS_2026_03_09 2026-03-09 2875 2716 79 na GCF_000360465.1 PRJNA224116 SAMN00792141 AIWC00000000.1 na 1157016 1280 Staphylococcus aureus M0221 strain=M0221 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0221_V1 Broad Institute GCA_000360465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/465/GCF_000360465.1_Stap_aure_M0221_V1/ na na na haploid bacteria 2925585 2919095 33.000000 0 5 20 NCBI RefSeq GCF_000360465.1-RS_2026_03_09 2026-03-09 2949 2772 79 na GCF_000360485.1 PRJNA224116 SAMN00809169 AJCJ00000000.1 na 1158517 1280 Staphylococcus aureus M0235 strain=M0235 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0235_V1 Broad Institute GCA_000360485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/485/GCF_000360485.1_Stap_aure_M0235_V1/ na na na haploid bacteria 2854696 2835568 33.000000 0 3 21 NCBI RefSeq GCF_000360485.1-RS_2025_01_29 2025-01-29 2835 2678 76 na GCF_000360505.1 PRJNA224116 SAMN00792142 AIWD00000000.1 na 1157017 1280 Staphylococcus aureus M0237 strain=M0237 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0237_V1 Broad Institute GCA_000360505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/505/GCF_000360505.1_Stap_aure_M0237_V1/ na na na haploid bacteria 2902309 2894564 33.000000 0 6 18 NCBI RefSeq GCF_000360505.1-RS_2026_02_24 2026-02-24 2928 2759 81 na GCF_000360525.1 PRJNA224116 SAMN00792143 AIWE00000000.1 na 1157018 1280 Staphylococcus aureus M0239 strain=M0239 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0239_V1 Broad Institute GCA_000360525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/525/GCF_000360525.1_Stap_aure_M0239_V1/ na na na haploid bacteria 2747294 2735231 33.000000 0 2 25 NCBI RefSeq GCF_000360525.1-RS_2025_01_09 2025-01-09 2739 2594 69 na GCF_000360545.1 PRJNA224116 SAMN01125836 ANZN00000000.1 na 1224923 1280 Staphylococcus aureus M0240 strain=M0240 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0240_V1 Broad Institute GCA_000360545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/545/GCF_000360545.1_Stap_aure_M0240_V1/ na na na haploid bacteria 2861639 2857604 33.000000 0 11 22 NCBI RefSeq GCF_000360545.1-RS_2026_03_09 2026-03-09 2889 2718 81 na GCF_000360565.1 PRJNA224116 SAMN00809170 AJCK00000000.1 na 1158518 1280 Staphylococcus aureus M0250 strain=M0250 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0250_V1 Broad Institute GCA_000360565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/565/GCF_000360565.1_Stap_aure_M0250_V1/ na na na haploid bacteria 2895690 2895655 33.000000 0 2 3 NCBI RefSeq GCF_000360565.1-RS_2026_03_09 2026-03-09 2903 2744 82 na GCF_000360585.1 PRJNA224116 SAMN00792144 AIWF00000000.1 na 1157019 1280 Staphylococcus aureus M0252 strain=M0252 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0252_V1 Broad Institute GCA_000360585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/585/GCF_000360585.1_Stap_aure_M0252_V1/ na na na haploid bacteria 2800006 2799331 33.000000 0 2 7 NCBI RefSeq GCF_000360585.1-RS_2025_01_09 2025-01-09 2760 2605 82 na GCF_000360605.1 PRJNA224116 SAMN01125837 ANZO00000000.1 na 1224924 1280 Staphylococcus aureus M0270 strain=M0270 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0270_V1 Broad Institute GCA_000360605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/605/GCF_000360605.1_Stap_aure_M0270_V1/ na na na haploid bacteria 2935183 2926881 33.000000 0 13 28 NCBI RefSeq GCF_000360605.1-RS_2026_03_09 2026-03-09 2990 2825 81 na GCF_000360625.1 PRJNA224116 SAMN01125838 ANZP00000000.1 na 1224925 1280 Staphylococcus aureus M0273 strain=M0273 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0273_V1 Broad Institute GCA_000360625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/625/GCF_000360625.1_Stap_aure_M0273_V1/ na na na haploid bacteria 2891684 2856871 33.000000 0 7 30 NCBI RefSeq GCF_000360625.1-RS_2025_01_09 2025-01-09 2877 2733 60 na GCF_000360645.1 PRJNA224116 SAMN01125839 ANZQ00000000.1 na 1224926 1280 Staphylococcus aureus M0279 strain=M0279 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0279_V1 Broad Institute GCA_000360645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/645/GCF_000360645.1_Stap_aure_M0279_V1/ na na na haploid bacteria 2880819 2873302 33.000000 0 4 13 NCBI RefSeq GCF_000360645.1-RS_2025_03_19 2025-03-19 2887 2741 69 na GCF_000360665.1 PRJNA224116 SAMN00809172 AJCM00000000.1 na 1158520 1280 Staphylococcus aureus M0280 strain=M0280 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0280_V1 Broad Institute GCA_000360665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/665/GCF_000360665.1_Stap_aure_M0280_V1/ na na na haploid bacteria 2934334 2926036 33.000000 0 12 24 NCBI RefSeq GCF_000360665.1-RS_2026_03_09 2026-03-09 2982 2823 78 na GCF_000360685.1 PRJNA224116 SAMN01125840 ANZR00000000.1 na 1224927 1280 Staphylococcus aureus M0288 strain=M0288 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0288_V1 Broad Institute GCA_000360685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/685/GCF_000360685.1_Stap_aure_M0288_V1/ na na na haploid bacteria 2933811 2898721 33.000000 0 8 31 NCBI RefSeq GCF_000360685.1-RS_2025_01_09 2025-01-09 2949 2787 78 na GCF_000360705.1 PRJNA224116 SAMN00809173 AJCN00000000.1 na 1158521 1280 Staphylococcus aureus M0306 strain=M0306 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0306_V1 Broad Institute GCA_000360705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/705/GCF_000360705.1_Stap_aure_M0306_V1/ na na na haploid bacteria 2899129 2891397 33.000000 0 2 10 NCBI RefSeq GCF_000360705.1-RS_2025_01_30 2025-01-30 2901 2750 66 na GCF_000360725.1 PRJNA224116 SAMN01125841 ANZS00000000.1 na 1224928 1280 Staphylococcus aureus M0312 strain=M0312 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0312_V1 Broad Institute GCA_000360725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/725/GCF_000360725.1_Stap_aure_M0312_V1/ na na na haploid bacteria 2986100 2965983 33.000000 0 5 23 NCBI RefSeq GCF_000360725.1-RS_2025_01_09 2025-01-09 3022 2846 82 na GCF_000360745.1 PRJNA224116 SAMN00792145 AIWG00000000.1 na 1157020 1280 Staphylococcus aureus M0326 strain=M0326 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0326_V1 Broad Institute GCA_000360745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/745/GCF_000360745.1_Stap_aure_M0326_V1/ na na na haploid bacteria 2929542 2895303 33.000000 0 11 35 NCBI RefSeq GCF_000360745.1-RS_2026_02_24 2026-02-24 2928 2762 82 na GCF_000360765.1 PRJNA224116 SAMN00792146 AIWH00000000.1 na 1157021 1280 Staphylococcus aureus M0328 strain=M0328 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0328_V1 Broad Institute GCA_000360765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/765/GCF_000360765.1_Stap_aure_M0328_V1/ na na na haploid bacteria 2915024 2882560 33.000000 0 4 37 NCBI RefSeq GCF_000360765.1-RS_2026_03_09 2026-03-09 2912 2767 66 na GCF_000360785.1 PRJNA224116 SAMN00792147 AIWI00000000.1 na 1157022 1280 Staphylococcus aureus M0329 strain=M0329 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0329_V1 Broad Institute GCA_000360785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/785/GCF_000360785.1_Stap_aure_M0329_V1/ na na na haploid bacteria 2937020 2929209 33.000000 0 10 22 NCBI RefSeq GCF_000360785.1-RS_2025_01_09 2025-01-09 2963 2790 80 na GCF_000360805.1 PRJNA224116 SAMN00792149 AIWJ00000000.1 na 1157023 1280 Staphylococcus aureus M0330 strain=M0330 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0330_V1 Broad Institute GCA_000360805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/805/GCF_000360805.1_Stap_aure_M0330_V1/ na na na haploid bacteria 2855248 2853100 33.000000 0 4 9 NCBI RefSeq GCF_000360805.1-RS_2026_03_09 2026-03-09 2838 2676 82 na GCF_000360825.1 PRJNA224116 SAMN00809174 AJCO00000000.1 na 1158522 1280 Staphylococcus aureus M0334 strain=M0334 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0334_V1 Broad Institute GCA_000360825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/825/GCF_000360825.1_Stap_aure_M0334_V1/ na na na haploid bacteria 2971222 2902502 33.000000 0 7 46 NCBI RefSeq GCF_000360825.1-RS_2025_01_09 2025-01-09 2952 2792 72 na GCF_000360845.1 PRJNA224116 SAMN00792150 AIWK00000000.1 na 1157024 1280 Staphylococcus aureus M0340 strain=M0340 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0340_V1 Broad Institute GCA_000360845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/845/GCF_000360845.1_Stap_aure_M0340_V1/ na na na haploid bacteria 2933541 2928132 33.000000 0 5 15 NCBI RefSeq GCF_000360845.1-RS_2026_03_09 2026-03-09 2981 2804 80 na GCF_000360865.1 PRJNA224116 SAMN00792151 AIWL00000000.1 na 1157025 1280 Staphylococcus aureus M0347 strain=M0347 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0347_V1 Broad Institute GCA_000360865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/865/GCF_000360865.1_Stap_aure_M0347_V1/ na na na haploid bacteria 2883127 2881452 33.000000 0 4 11 NCBI RefSeq GCF_000360865.1-RS_2026_03_09 2026-03-09 2898 2740 83 na GCF_000360885.1 PRJNA224116 SAMN00809175 AJCP00000000.1 na 1158523 1280 Staphylococcus aureus M0350 strain=M0350 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0350_V1 Broad Institute GCA_000360885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/885/GCF_000360885.1_Stap_aure_M0350_V1/ na na na haploid bacteria 2963134 2902969 33.000000 0 5 39 NCBI RefSeq GCF_000360885.1-RS_2025_01_09 2025-01-09 2945 2775 78 na GCF_000360905.1 PRJNA224116 SAMN00809176 AJCQ00000000.1 na 1158524 1280 Staphylococcus aureus M0351 strain=M0351 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0351_V1 Broad Institute GCA_000360905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/905/GCF_000360905.1_Stap_aure_M0351_V1/ na na na haploid bacteria 2887530 2871955 33.000000 0 9 22 NCBI RefSeq GCF_000360905.1-RS_2026_03_09 2026-03-09 2901 2740 82 na GCF_000360925.1 PRJNA224116 SAMN00809178 AJCR00000000.1 na 1158525 1280 Staphylococcus aureus M0363 strain=M0363 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0363_V1 Broad Institute GCA_000360925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/925/GCF_000360925.1_Stap_aure_M0363_V1/ na na na haploid bacteria 2879577 2871257 33.000000 0 3 6 NCBI RefSeq GCF_000360925.1-RS_2025_01_09 2025-01-09 2892 2724 80 na GCF_000360945.1 PRJNA224116 SAMN00792152 AIWM00000000.1 na 1157026 1280 Staphylococcus aureus M0364 strain=M0364 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0364_V1 Broad Institute GCA_000360945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/945/GCF_000360945.1_Stap_aure_M0364_V1/ na na na haploid bacteria 2865129 2862109 33.000000 0 7 14 NCBI RefSeq GCF_000360945.1-RS_2026_03_09 2026-03-09 2888 2734 80 na GCF_000360965.1 PRJNA224116 SAMN00809179 AJCS00000000.1 na 1158526 1280 Staphylococcus aureus M0367 strain=M0367 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0367_V1 Broad Institute GCA_000360965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/965/GCF_000360965.1_Stap_aure_M0367_V1/ na na na haploid bacteria 2909870 2897354 33.000000 0 4 22 NCBI RefSeq GCF_000360965.1-RS_2026_03_09 2026-03-09 2934 2777 78 na GCF_000360985.1 PRJNA224116 SAMN00809180 AJCT00000000.1 na 1158527 1280 Staphylococcus aureus M0374 strain=M0374 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0374_V1 Broad Institute GCA_000360985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/360/985/GCF_000360985.1_Stap_aure_M0374_V1/ na na na haploid bacteria 2884620 2856630 33.000000 0 4 22 NCBI RefSeq GCF_000360985.1-RS_2025_01_30 2025-01-30 2881 2729 77 na GCF_000361005.1 PRJNA224116 SAMN00809181 AJCU00000000.1 na 1158528 1280 Staphylococcus aureus M0375 strain=M0375 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0375_V1 Broad Institute GCA_000361005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/005/GCF_000361005.1_Stap_aure_M0375_V1/ na na na haploid bacteria 2934666 2906821 33.000000 0 14 30 NCBI RefSeq GCF_000361005.1-RS_2026_03_09 2026-03-09 2953 2788 76 na GCF_000361025.1 PRJNA224116 SAMN00792153 AIWN00000000.1 na 1157027 1280 Staphylococcus aureus M0391 strain=M0391 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0391_V1 Broad Institute GCA_000361025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/025/GCF_000361025.1_Stap_aure_M0391_V1/ na na na haploid bacteria 2901295 2889232 33.000000 0 8 22 NCBI RefSeq GCF_000361025.1-RS_2025_01_09 2025-01-09 2914 2754 80 na GCF_000361045.1 PRJNA224116 SAMN00809182 AJCV00000000.1 na 1158529 1280 Staphylococcus aureus M0396 strain=M0396 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0396_V1 Broad Institute GCA_000361045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/045/GCF_000361045.1_Stap_aure_M0396_V1/ na na na haploid bacteria 2775577 2753086 32.500000 0 6 33 NCBI RefSeq GCF_000361045.1-RS_2026_03_09 2026-03-09 2756 2600 73 na GCF_000361065.1 PRJNA224116 SAMN01125842 ANZT00000000.1 na 1224929 1280 Staphylococcus aureus M0404 strain=M0404 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0404_V1 Broad Institute GCA_000361065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/065/GCF_000361065.1_Stap_aure_M0404_V1/ na na na haploid bacteria 2932648 2916634 33.000000 0 7 19 NCBI RefSeq GCF_000361065.1-RS_2026_03_09 2026-03-09 2959 2795 76 na GCF_000361085.1 PRJNA224116 SAMN00792154 AIWO00000000.1 na 1157028 1280 Staphylococcus aureus M0408 strain=M0408 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0408_V1 Broad Institute GCA_000361085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/085/GCF_000361085.1_Stap_aure_M0408_V1/ na na na haploid bacteria 2932837 2908628 33.000000 0 9 30 NCBI RefSeq GCF_000361085.1-RS_2025_01_09 2025-01-09 2913 2731 74 na GCF_000361105.1 PRJNA224116 SAMN01125843 ANZU00000000.1 na 1224930 1280 Staphylococcus aureus M0415 strain=M0415 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0415_V1 Broad Institute GCA_000361105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/105/GCF_000361105.1_Stap_aure_M0415_V1/ na na na haploid bacteria 2899314 2891700 33.000000 0 9 23 NCBI RefSeq GCF_000361105.1-RS_2026_03_09 2026-03-09 2935 2779 79 na GCF_000361125.1 PRJNA224116 SAMN00809183 AJCW00000000.1 na 1158530 1280 Staphylococcus aureus M0424 strain=M0424 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0424_V1 Broad Institute GCA_000361125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/125/GCF_000361125.1_Stap_aure_M0424_V1/ na na na haploid bacteria 2960173 2941520 33.000000 0 6 32 NCBI RefSeq GCF_000361125.1-RS_2025_01_09 2025-01-09 3006 2843 69 na GCF_000361145.1 PRJNA224116 SAMN00792155 AIWP00000000.1 na 1157029 1280 Staphylococcus aureus M0427 strain=M0427 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0427_V1 Broad Institute GCA_000361145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/145/GCF_000361145.1_Stap_aure_M0427_V1/ na na na haploid bacteria 2838730 2838430 33.000000 0 2 5 NCBI RefSeq GCF_000361145.1-RS_2026_03_09 2026-03-09 2822 2665 82 na GCF_000361165.1 PRJNA224116 SAMN00809184 AJCX00000000.1 na 1158531 1280 Staphylococcus aureus M0438 strain=M0438 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0438_V1 Broad Institute GCA_000361165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/165/GCF_000361165.1_Stap_aure_M0438_V1/ na na na haploid bacteria 2841556 2832866 33.000000 0 5 16 NCBI RefSeq GCF_000361165.1-RS_2026_03_09 2026-03-09 2820 2678 69 na GCF_000361185.1 PRJNA224116 SAMN00792156 AIWQ00000000.1 na 1157030 1280 Staphylococcus aureus M0450 strain=M0450 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0450_V1 Broad Institute GCA_000361185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/185/GCF_000361185.1_Stap_aure_M0450_V1/ na na na haploid bacteria 2905147 2856112 33.000000 0 7 41 NCBI RefSeq GCF_000361185.1-RS_2025_01_30 2025-01-30 2896 2738 75 na GCF_000361205.1 PRJNA224116 SAMN01125844 ANZV00000000.1 na 1224931 1280 Staphylococcus aureus M0455 strain=M0455 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0455_V1 Broad Institute GCA_000361205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/205/GCF_000361205.1_Stap_aure_M0455_V1/ na na na haploid bacteria 2757657 2740446 33.000000 0 3 20 NCBI RefSeq GCF_000361205.1-RS_2025_01_29 2025-01-29 2720 2581 71 na GCF_000361225.1 PRJNA224116 SAMN01125845 ANZW00000000.1 na 1224932 1280 Staphylococcus aureus M0460 strain=M0460 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0460_V1 Broad Institute GCA_000361225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/225/GCF_000361225.1_Stap_aure_M0460_V1/ na na na haploid bacteria 2887208 2868373 33.000000 0 7 31 NCBI RefSeq GCF_000361225.1-RS_2025_01_09 2025-01-09 2904 2740 79 na GCF_000361245.1 PRJNA224116 SAMN00792157 AIWR00000000.1 na 1157031 1280 Staphylococcus aureus M0467 strain=M0467 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0467_V1 Broad Institute GCA_000361245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/245/GCF_000361245.1_Stap_aure_M0467_V1/ na na na haploid bacteria 2849046 2845946 33.000000 0 6 12 NCBI RefSeq GCF_000361245.1-RS_2026_03_09 2026-03-09 2854 2698 81 na GCF_000361265.1 PRJNA224116 SAMN00792158 AIWS00000000.1 na 1157032 1280 Staphylococcus aureus M0468 strain=M0468 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0468_V1 Broad Institute GCA_000361265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/265/GCF_000361265.1_Stap_aure_M0468_V1/ na na na haploid bacteria 2997178 2969199 33.000000 0 5 24 NCBI RefSeq GCF_000361265.1-RS_2026_03_09 2026-03-09 3012 2840 73 na GCF_000361285.1 PRJNA224116 SAMN00792160 AIWT00000000.1 na 1157033 1280 Staphylococcus aureus M0478 strain=M0478 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0478_V1 Broad Institute GCA_000361285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/285/GCF_000361285.1_Stap_aure_M0478_V1/ na na na haploid bacteria 2879857 2865317 33.000000 0 9 18 NCBI RefSeq GCF_000361285.1-RS_2025_01_09 2025-01-09 2872 2714 82 na GCF_000361305.1 PRJNA224116 SAMN00792161 AIWU00000000.1 na 1157034 1280 Staphylococcus aureus M0489 strain=M0489 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0489_V1 Broad Institute GCA_000361305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/305/GCF_000361305.1_Stap_aure_M0489_V1/ na na na haploid bacteria 2977782 2949369 33.000000 0 16 70 NCBI RefSeq GCF_000361305.1-RS_2026_03_09 2026-03-09 3023 2868 60 na GCF_000361325.1 PRJNA224116 SAMN01125846 ANZX00000000.1 na 1224933 1280 Staphylococcus aureus M0493 strain=M0493 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0493_V1 Broad Institute GCA_000361325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/325/GCF_000361325.1_Stap_aure_M0493_V1/ na na na haploid bacteria 2876988 2875878 33.000000 0 4 12 NCBI RefSeq GCF_000361325.1-RS_2025_01_09 2025-01-09 2882 2721 83 na GCF_000361345.1 PRJNA224116 SAMN00792162 AIWV00000000.1 na 1157035 1280 Staphylococcus aureus M0494 strain=M0494 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0494_V1 Broad Institute GCA_000361345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/345/GCF_000361345.1_Stap_aure_M0494_V1/ na na na haploid bacteria 2808051 2791950 33.000000 0 2 20 NCBI RefSeq GCF_000361345.1-RS_2025_01_29 2025-01-29 2788 2651 76 na GCF_000361365.1 PRJNA224116 SAMN00809186 AJCZ00000000.1 na 1158533 1280 Staphylococcus aureus M0510 strain=M0510 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0510_V1 Broad Institute GCA_000361365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/365/GCF_000361365.1_Stap_aure_M0510_V1/ na na na haploid bacteria 2979486 2967210 33.000000 0 6 14 NCBI RefSeq GCF_000361365.1-RS_2025_01_09 2025-01-09 3008 2845 82 na GCF_000361385.1 PRJNA224116 SAMN00809187 AJDA00000000.1 na 1158534 1280 Staphylococcus aureus M0513 strain=M0513 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0513_V1 Broad Institute GCA_000361385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/385/GCF_000361385.1_Stap_aure_M0513_V1/ na na na haploid bacteria 2932850 2904569 33.000000 0 1 27 NCBI RefSeq GCF_000361385.1-RS_2025_01_09 2025-01-09 2917 2725 74 na GCF_000361405.1 PRJNA224116 SAMN00809030 AIXB00000000.1 na 1158682 1280 Staphylococcus aureus M0528 strain=M0528 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0528_V1 Broad Institute GCA_000361405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/405/GCF_000361405.1_Stap_aure_M0528_V1/ na na na haploid bacteria 2959338 2945108 33.000000 0 17 30 NCBI RefSeq GCF_000361405.1-RS_2026_03_09 2026-03-09 2979 2818 78 na GCF_000361425.1 PRJNA224116 SAMN00809072 AIYH00000000.1 na 1158462 1280 Staphylococcus aureus M0529 strain=M0529 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0529_V1 Broad Institute GCA_000361425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/425/GCF_000361425.1_Stap_aure_M0529_V1/ na na na haploid bacteria 2931279 2910263 33.000000 0 7 19 NCBI RefSeq GCF_000361425.1-RS_2025_01_09 2025-01-09 2945 2785 82 na GCF_000361445.1 PRJNA224116 SAMN00809041 AIXC00000000.1 na 1158683 1280 Staphylococcus aureus M0531 strain=M0531 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0531_V1 Broad Institute GCA_000361445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/445/GCF_000361445.1_Stap_aure_M0531_V1/ na na na haploid bacteria 2871328 2857603 32.500000 0 4 11 NCBI RefSeq GCF_000361445.1-RS_2026_03_09 2026-03-09 2868 2721 66 na GCF_000361465.1 PRJNA224116 SAMN00809052 AIXD00000000.1 na 1158684 1280 Staphylococcus aureus M0536 strain=M0536 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0536_V1 Broad Institute GCA_000361465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/465/GCF_000361465.1_Stap_aure_M0536_V1/ na na na haploid bacteria 2874599 2860910 33.000000 0 4 17 NCBI RefSeq GCF_000361465.1-RS_2025_01_09 2025-01-09 2857 2701 78 na GCF_000361485.1 PRJNA224116 SAMN00809055 AIXE00000000.1 na 1158685 1280 Staphylococcus aureus M0539 strain=M0539 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0539_V1 Broad Institute GCA_000361485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/485/GCF_000361485.1_Stap_aure_M0539_V1/ na na na haploid bacteria 2912232 2899130 33.000000 0 16 31 NCBI RefSeq GCF_000361485.1-RS_2025_01_09 2025-01-09 2955 2791 74 na GCF_000361505.1 PRJNA224116 SAMN00809056 AIXF00000000.1 na 1158686 1280 Staphylococcus aureus M0547 strain=M0547 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0547_V1 Broad Institute GCA_000361505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/505/GCF_000361505.1_Stap_aure_M0547_V1/ na na na haploid bacteria 2910185 2894416 33.000000 0 8 26 NCBI RefSeq GCF_000361505.1-RS_2026_03_09 2026-03-09 2940 2776 82 na GCF_000361545.1 PRJNA224116 SAMN00809057 AIXG00000000.1 na 1158687 1280 Staphylococcus aureus M0565 strain=M0565 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0565_V1 Broad Institute GCA_000361545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/545/GCF_000361545.1_Stap_aure_M0565_V1/ na na na haploid bacteria 2887809 2871899 33.000000 0 7 21 NCBI RefSeq GCF_000361545.1-RS_2026_03_09 2026-03-09 2898 2744 79 na GCF_000361565.1 PRJNA224116 SAMN00809190 AJDC00000000.1 na 1158536 1280 Staphylococcus aureus M0571 strain=M0571 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0571_V1 Broad Institute GCA_000361565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/565/GCF_000361565.1_Stap_aure_M0571_V1/ na na na haploid bacteria 2908695 2896163 33.000000 0 3 14 NCBI RefSeq GCF_000361565.1-RS_2025_01_09 2025-01-09 2937 2779 83 na GCF_000361585.1 PRJNA224116 SAMN00809058 AIXH00000000.1 na 1158688 1280 Staphylococcus aureus M0580 strain=M0580 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0580_V1 Broad Institute GCA_000361585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/585/GCF_000361585.1_Stap_aure_M0580_V1/ na na na haploid bacteria 2863691 2842992 33.000000 0 3 20 NCBI RefSeq GCF_000361585.1-RS_2025_01_29 2025-01-29 2867 2713 72 na GCF_000361605.1 PRJNA224116 SAMN00809191 AJDD00000000.1 na 1158537 1280 Staphylococcus aureus M0584 strain=M0584 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0584_V1 Broad Institute GCA_000361605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/605/GCF_000361605.1_Stap_aure_M0584_V1/ na na na haploid bacteria 2892851 2882724 33.000000 0 4 15 NCBI RefSeq GCF_000361605.1-RS_2025_01_29 2025-01-29 2912 2760 75 na GCF_000361625.1 PRJNA224116 SAMN00809192 AJDE00000000.1 na 1158538 1280 Staphylococcus aureus M0586 strain=M0586 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0586_V1 Broad Institute GCA_000361625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/625/GCF_000361625.1_Stap_aure_M0586_V1/ na na na haploid bacteria 2953584 2907053 33.000000 0 2 28 NCBI RefSeq GCF_000361625.1-RS_2025_01_29 2025-01-29 2924 2767 77 na GCF_000361645.1 PRJNA224116 SAMN00809059 AIXI00000000.1 na 1158689 1280 Staphylococcus aureus M0602 strain=M0602 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0602_V1 Broad Institute GCA_000361645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/645/GCF_000361645.1_Stap_aure_M0602_V1/ na na na haploid bacteria 2917390 2898117 33.000000 0 7 22 NCBI RefSeq GCF_000361645.1-RS_2026_02_24 2026-02-24 2932 2780 72 na GCF_000361665.1 PRJNA224116 SAMN00809060 AIXJ00000000.1 na 1158690 1280 Staphylococcus aureus M0622 strain=M0622 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0622_V1 Broad Institute GCA_000361665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/665/GCF_000361665.1_Stap_aure_M0622_V1/ na na na haploid bacteria 2874180 2859923 33.000000 0 4 16 NCBI RefSeq GCF_000361665.1-RS_2025_01_09 2025-01-09 2880 2727 73 na GCF_000361685.1 PRJNA224116 SAMN00809061 AIYG00000000.1 na 1158461 1280 Staphylococcus aureus M0628 strain=M0628 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0628_V1 Broad Institute GCA_000361685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/685/GCF_000361685.1_Stap_aure_M0628_V1/ na na na haploid bacteria 2828436 2806880 33.000000 0 1 12 NCBI RefSeq GCF_000361685.1-RS_2025_01_30 2025-01-30 2791 2650 69 na GCF_000361705.1 PRJNA224116 SAMN00809193 AJDF00000000.1 na 1158539 1280 Staphylococcus aureus M0633 strain=M0633 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0633_V1 Broad Institute GCA_000361705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/705/GCF_000361705.1_Stap_aure_M0633_V1/ na na na haploid bacteria 2978683 2937742 33.000000 0 5 25 NCBI RefSeq GCF_000361705.1-RS_2026_03_09 2026-03-09 2990 2821 74 na GCF_000361725.1 PRJNA224116 SAMN01110270 ANZY00000000.1 na 1214901 1280 Staphylococcus aureus M0646 strain=M0646 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0646_V1 Broad Institute GCA_000361725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/725/GCF_000361725.1_Stap_aure_M0646_V1/ na na na haploid bacteria 2885185 2874265 33.000000 0 7 13 NCBI RefSeq GCF_000361725.1-RS_2025_01_09 2025-01-09 2912 2764 77 na GCF_000361745.1 PRJNA224116 SAMN01047804 ANZZ00000000.1 na 1213721 1280 Staphylococcus aureus M0648 strain=M0648 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0648_V1 Broad Institute GCA_000361745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/745/GCF_000361745.1_Stap_aure_M0648_V1/ na na na haploid bacteria 2910106 2896133 33.000000 0 12 24 NCBI RefSeq GCF_000361745.1-RS_2025_03_19 2025-03-19 2924 2762 80 na GCF_000361765.1 PRJNA224116 SAMN01047805 AOAA00000000.1 na 1213722 1280 Staphylococcus aureus M0660 strain=M0660 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0660_V1 Broad Institute GCA_000361765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/765/GCF_000361765.1_Stap_aure_M0660_V1/ na na na haploid bacteria 2928501 2917174 33.000000 0 15 29 NCBI RefSeq GCF_000361765.1-RS_2025_03_19 2025-03-19 2964 2797 83 na GCF_000361785.1 PRJNA224116 SAMN01047806 AOAB00000000.1 na 1213723 1280 Staphylococcus aureus M0663 strain=M0663 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0663_V1 Broad Institute GCA_000361785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/785/GCF_000361785.1_Stap_aure_M0663_V1/ na na na haploid bacteria 2866925 2854414 33.000000 0 15 25 NCBI RefSeq GCF_000361785.1-RS_2025_08_25 2025-08-25 2899 2740 78 na GCF_000361805.1 PRJNA224116 SAMN01047807 AOAC00000000.1 na 1213724 1280 Staphylococcus aureus M0673 strain=M0673 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0673_V1 Broad Institute GCA_000361805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/805/GCF_000361805.1_Stap_aure_M0673_V1/ na na na haploid bacteria 2866841 2855491 33.000000 0 10 18 NCBI RefSeq GCF_000361805.1-RS_2025_03_19 2025-03-19 2889 2733 76 na GCF_000361825.1 PRJNA224116 SAMN00809031 AIXK00000000.1 na 1158691 1280 Staphylococcus aureus M0676 strain=M0676 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0676_V1 Broad Institute GCA_000361825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/825/GCF_000361825.1_Stap_aure_M0676_V1/ na na na haploid bacteria 2877074 2854630 33.000000 0 6 25 NCBI RefSeq GCF_000361825.1-RS_2025_01_09 2025-01-09 2863 2695 83 na GCF_000361845.1 PRJNA224116 SAMN00809032 AIXL00000000.1 na 1158692 1280 Staphylococcus aureus M0687 strain=M0687 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0687_V1 Broad Institute GCA_000361845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/845/GCF_000361845.1_Stap_aure_M0687_V1/ na na na haploid bacteria 2953423 2940301 33.000000 0 9 18 NCBI RefSeq GCF_000361845.1-RS_2026_03_09 2026-03-09 2964 2821 72 na GCF_000361865.1 PRJNA224116 SAMN00809033 AIXM00000000.1 na 1158693 1280 Staphylococcus aureus M0692 strain=M0692 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0692_V1 Broad Institute GCA_000361865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/865/GCF_000361865.1_Stap_aure_M0692_V1/ na na na haploid bacteria 2932175 2906571 33.000000 0 10 29 NCBI RefSeq GCF_000361865.1-RS_2025_01_09 2025-01-09 2953 2796 79 na GCF_000361885.1 PRJNA224116 SAMN01047808 AOAD00000000.1 na 1213725 1280 Staphylococcus aureus M0695 strain=M0695 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0695_V1 Broad Institute GCA_000361885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/885/GCF_000361885.1_Stap_aure_M0695_V1/ na na na haploid bacteria 2872227 2868291 33.000000 0 19 27 NCBI RefSeq GCF_000361885.1-RS_2025_03_19 2025-03-19 2890 2712 84 na GCF_000361905.1 PRJNA224116 SAMN00809034 AIXN00000000.1 na 1158694 1280 Staphylococcus aureus M0719 strain=M0719 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0719_V1 Broad Institute GCA_000361905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/905/GCF_000361905.1_Stap_aure_M0719_V1/ na na na haploid bacteria 2975033 2932600 33.000000 0 10 35 NCBI RefSeq GCF_000361905.1-RS_2026_03_09 2026-03-09 2992 2825 80 na GCF_000361925.1 PRJNA224116 SAMN00809035 AIXO00000000.1 na 1158695 1280 Staphylococcus aureus M0769 strain=M0769 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0769_V1 Broad Institute GCA_000361925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/925/GCF_000361925.1_Stap_aure_M0769_V1/ na na na haploid bacteria 2867212 2864698 33.000000 0 13 20 NCBI RefSeq GCF_000361925.1-RS_2025_01_09 2025-01-09 2906 2745 78 na GCF_000361945.1 PRJNA224116 SAMN00809036 AIXP00000000.1 na 1158696 1280 Staphylococcus aureus M0770 strain=M0770 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0770_V1 Broad Institute GCA_000361945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/945/GCF_000361945.1_Stap_aure_M0770_V1/ na na na haploid bacteria 2918468 2911212 33.000000 0 12 25 NCBI RefSeq GCF_000361945.1-RS_2026_03_09 2026-03-09 2947 2792 75 na GCF_000361965.1 PRJNA224116 SAMN00809037 AIXQ00000000.1 na 1158697 1280 Staphylococcus aureus M0780 strain=M0780 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0780_V1 Broad Institute GCA_000361965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/965/GCF_000361965.1_Stap_aure_M0780_V1/ na na na haploid bacteria 2866092 2858028 33.000000 0 7 18 NCBI RefSeq GCF_000361965.1-RS_2025_01_30 2025-01-30 2890 2731 77 na GCF_000361985.1 PRJNA224116 SAMN01047809 AOAE00000000.1 na 1213726 1280 Staphylococcus aureus M0792 strain=M0792 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0792_V1 Broad Institute GCA_000361985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/361/985/GCF_000361985.1_Stap_aure_M0792_V1/ na na na haploid bacteria 2940683 2908800 33.000000 0 11 34 NCBI RefSeq GCF_000361985.1-RS_2025_08_25 2025-08-25 2950 2790 81 na GCF_000362005.1 PRJNA224116 SAMN00809038 AIXR00000000.1 na 1158698 1280 Staphylococcus aureus M0799 strain=M0799 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0799_V1 Broad Institute GCA_000362005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/005/GCF_000362005.1_Stap_aure_M0799_V1/ na na na haploid bacteria 2954332 2926946 33.000000 0 12 30 NCBI RefSeq GCF_000362005.1-RS_2026_03_09 2026-03-09 2974 2816 79 na GCF_000362025.1 PRJNA224116 SAMN01047810 AOAF00000000.1 na 1213727 1280 Staphylococcus aureus M0822 strain=M0822 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0822_V1 Broad Institute GCA_000362025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/025/GCF_000362025.1_Stap_aure_M0822_V1/ na na na haploid bacteria 2879692 2874237 33.000000 0 8 17 NCBI RefSeq GCF_000362025.1-RS_2025_03_19 2025-03-19 2906 2747 80 na GCF_000362045.1 PRJNA224116 SAMN00809039 AIXS00000000.1 na 1158699 1280 Staphylococcus aureus M0823 strain=M0823 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0823_V1 Broad Institute GCA_000362045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/045/GCF_000362045.1_Stap_aure_M0823_V1/ na na na haploid bacteria 2975605 2949783 33.000000 0 11 37 NCBI RefSeq GCF_000362045.1-RS_2026_03_09 2026-03-09 3004 2840 79 na GCF_000362065.1 PRJNA224116 SAMN01047811 AOAG00000000.1 na 1213728 1280 Staphylococcus aureus M0831 strain=M0831 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0831_V1 Broad Institute GCA_000362065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/065/GCF_000362065.1_Stap_aure_M0831_V1/ na na na haploid bacteria 2957781 2939850 33.000000 0 1 26 NCBI RefSeq GCF_000362065.1-RS_2025_03_19 2025-03-19 3002 2834 75 na GCF_000362085.1 PRJNA224116 SAMN00809040 AIXT00000000.1 na 1158700 1280 Staphylococcus aureus M0844 strain=M0844 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0844_V1 Broad Institute GCA_000362085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/085/GCF_000362085.1_Stap_aure_M0844_V1/ na na na haploid bacteria 2884086 2878046 33.000000 0 4 11 NCBI RefSeq GCF_000362085.1-RS_2025_01_09 2025-01-09 2888 2733 79 na GCF_000362105.1 PRJNA224116 SAMN01047812 AOAH00000000.1 na 1213729 1280 Staphylococcus aureus M0871 strain=M0871 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0871_V1 Broad Institute GCA_000362105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/105/GCF_000362105.1_Stap_aure_M0871_V1/ na na na haploid bacteria 2883015 2847717 33.000000 0 10 37 NCBI RefSeq GCF_000362105.1-RS_2025_03_19 2025-03-19 2861 2705 72 na GCF_000362125.1 PRJNA224116 SAMN01047813 AOAI00000000.1 na 1213730 1280 Staphylococcus aureus M0877 strain=M0877 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0877_V1 Broad Institute GCA_000362125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/125/GCF_000362125.1_Stap_aure_M0877_V1/ na na na haploid bacteria 2812564 2799461 33.000000 0 7 22 NCBI RefSeq GCF_000362125.1-RS_2025_03_19 2025-03-19 2816 2663 72 na GCF_000362145.1 PRJNA224116 SAMN01047814 AOAJ00000000.1 na 1213731 1282 Staphylococcus epidermidis M0881 strain=M0881 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0881_V1 Broad Institute GCA_000362145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/145/GCF_000362145.1_Stap_aure_M0881_V1/ na na na haploid bacteria 2678281 2639670 32.000000 0 9 40 NCBI RefSeq GCF_000362145.1-RS_2026_02_17 2026-02-17 2583 2413 85 na GCF_000362165.1 PRJNA224116 SAMN01047815 AOAK00000000.1 na 1213732 1280 Staphylococcus aureus M0892 strain=M0892 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0892_V1 Broad Institute GCA_000362165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/165/GCF_000362165.1_Stap_aure_M0892_V1/ na na na haploid bacteria 2896450 2887665 33.000000 0 6 13 NCBI RefSeq GCF_000362165.1-RS_2025_03_19 2025-03-19 2909 2758 78 na GCF_000362185.1 PRJNA224116 SAMN01047816 AOAL00000000.1 na 1213733 1280 Staphylococcus aureus M0900 strain=M0900 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0900_V1 Broad Institute GCA_000362185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/185/GCF_000362185.1_Stap_aure_M0900_V1/ na na na haploid bacteria 2898131 2891073 33.000000 0 12 19 NCBI RefSeq GCF_000362185.1-RS_2025_03_19 2025-03-19 2923 2752 85 na GCF_000362205.1 PRJNA224116 SAMN01047817 AOAM00000000.1 na 1213734 1280 Staphylococcus aureus M0927 strain=M0927 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0927_V1 Broad Institute GCA_000362205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/205/GCF_000362205.1_Stap_aure_M0927_V1/ na na na haploid bacteria 2873002 2871928 33.000000 0 12 18 NCBI RefSeq GCF_000362205.1-RS_2026_03_09 2026-03-09 2900 2742 75 na GCF_000362225.1 PRJNA224116 SAMN00809042 AIXU00000000.1 na 1158701 1280 Staphylococcus aureus M0934 strain=M0934 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0934_V1 Broad Institute GCA_000362225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/225/GCF_000362225.1_Stap_aure_M0934_V1/ na na na haploid bacteria 2935560 2907050 33.000000 0 5 28 NCBI RefSeq GCF_000362225.1-RS_2025_01_09 2025-01-09 2944 2778 80 na GCF_000362245.1 PRJNA224116 SAMN00809043 AIXV00000000.1 na 1158702 1280 Staphylococcus aureus M0943 strain=M0943 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0943_V1 Broad Institute GCA_000362245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/245/GCF_000362245.1_Stap_aure_M0943_V1/ na na na haploid bacteria 2868599 2861604 33.000000 0 6 13 NCBI RefSeq GCF_000362245.1-RS_2026_03_09 2026-03-09 2880 2726 76 na GCF_000362265.1 PRJNA224116 SAMN00809044 AIXW00000000.1 na 1158703 1280 Staphylococcus aureus M0944 strain=M0944 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0944_V1 Broad Institute GCA_000362265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/265/GCF_000362265.1_Stap_aure_M0944_V1/ na na na haploid bacteria 2892801 2889047 33.000000 0 6 12 NCBI RefSeq GCF_000362265.1-RS_2025_01_29 2025-01-29 2897 2755 70 na GCF_000362285.1 PRJNA224116 SAMN00839740 AOAN00000000.1 na 1169255 1280 Staphylococcus aureus M0946 strain=M0946 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0946_V1 Broad Institute GCA_000362285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/285/GCF_000362285.1_Stap_aure_M0946_V1/ na na na haploid bacteria 2977830 2958991 32.500000 0 10 31 NCBI RefSeq GCF_000362285.1-RS_2025_01_09 2025-01-09 2975 2783 76 na GCF_000362305.1 PRJNA224116 SAMN00809045 AIXX00000000.1 na 1158704 1280 Staphylococcus aureus M0953 strain=M0953 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0953_V1 Broad Institute GCA_000362305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/305/GCF_000362305.1_Stap_aure_M0953_V1/ na na na haploid bacteria 2846571 2844118 33.000000 0 6 16 NCBI RefSeq GCF_000362305.1-RS_2026_03_09 2026-03-09 2858 2702 80 na GCF_000362325.1 PRJNA224116 SAMN00839741 AOAO00000000.1 na 1169256 1280 Staphylococcus aureus M0964 strain=M0964 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0964_V1 Broad Institute GCA_000362325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/325/GCF_000362325.1_Stap_aure_M0964_V1/ na na na haploid bacteria 2880620 2880400 33.000000 0 8 10 NCBI RefSeq GCF_000362325.1-RS_2025_01_09 2025-01-09 2901 2751 79 na GCF_000362345.1 PRJNA224116 SAMN00839742 AOAP00000000.1 na 1169257 1280 Staphylococcus aureus M0978 strain=M0978 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0978_V1 Broad Institute GCA_000362345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/345/GCF_000362345.1_Stap_aure_M0978_V1/ na na na haploid bacteria 2849632 2845627 33.000000 0 8 14 NCBI RefSeq GCF_000362345.1-RS_2026_03_09 2026-03-09 2893 2746 81 na GCF_000362365.1 PRJNA224116 SAMN00839743 AOAQ00000000.1 na 1169258 1280 Staphylococcus aureus M0994 strain=M0994 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0994_V1 Broad Institute GCA_000362365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/365/GCF_000362365.1_Stap_aure_M0994_V1/ na na na haploid bacteria 2898143 2892285 33.000000 0 4 9 NCBI RefSeq GCF_000362365.1-RS_2025_01_09 2025-01-09 2905 2748 80 na GCF_000362385.1 PRJNA224116 SAMN00809046 AIXY00000000.1 na 1158705 1280 Staphylococcus aureus M0998 strain=M0998 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0998_V1 Broad Institute GCA_000362385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/385/GCF_000362385.1_Stap_aure_M0998_V1/ na na na haploid bacteria 2867247 2861258 33.000000 0 7 20 NCBI RefSeq GCF_000362385.1-RS_2025_01_09 2025-01-09 2891 2728 82 na GCF_000362405.1 PRJNA224116 SAMN00809047 AIXZ00000000.1 na 1158706 1280 Staphylococcus aureus M0999 strain=M0999 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0999_V1 Broad Institute GCA_000362405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/405/GCF_000362405.1_Stap_aure_M0999_V1/ na na na haploid bacteria 2870301 2861734 33.000000 0 4 15 NCBI RefSeq GCF_000362405.1-RS_2025_01_30 2025-01-30 2872 2726 69 na GCF_000362425.1 PRJNA224116 SAMN00809048 AIYA00000000.1 na 1158707 1280 Staphylococcus aureus M1007 strain=M1007 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1007_V1 Broad Institute GCA_000362425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/425/GCF_000362425.1_Stap_aure_M1007_V1/ na na na haploid bacteria 2947192 2935516 33.000000 0 5 19 NCBI RefSeq GCF_000362425.1-RS_2025_02_04 2025-02-04 2993 2825 74 na GCF_000362445.1 PRJNA224116 SAMN00809049 AIYB00000000.1 na 1158708 1280 Staphylococcus aureus M1010 strain=M1010 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1010_V1 Broad Institute GCA_000362445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/445/GCF_000362445.1_Stap_aure_M1010_V1/ na na na haploid bacteria 2882800 2860941 33.000000 0 5 23 NCBI RefSeq GCF_000362445.1-RS_2026_03_09 2026-03-09 2875 2732 69 na GCF_000362465.1 PRJNA224116 SAMN00809050 AIYC00000000.1 na 1158709 1280 Staphylococcus aureus M1015 strain=M1015 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1015_V1 Broad Institute GCA_000362465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/465/GCF_000362465.1_Stap_aure_M1015_V1/ na na na haploid bacteria 2942753 2928534 33.000000 0 8 28 NCBI RefSeq GCF_000362465.1-RS_2025_01_09 2025-01-09 2977 2811 80 na GCF_000362485.1 PRJNA224116 SAMN00809051 AIYD00000000.1 na 1158710 1280 Staphylococcus aureus M1016 strain=M1016 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1016_V1 Broad Institute GCA_000362485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/485/GCF_000362485.1_Stap_aure_M1016_V1/ na na na haploid bacteria 2873348 2859203 33.000000 0 6 21 NCBI RefSeq GCF_000362485.1-RS_2025_01_09 2025-01-09 2878 2724 75 na GCF_000362505.1 PRJNA224116 SAMN00839744 AOAR00000000.1 na 1169259 1280 Staphylococcus aureus M1034 strain=M1034 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1034_V1 Broad Institute GCA_000362505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/505/GCF_000362505.1_Stap_aure_M1034_V1/ na na na haploid bacteria 2841662 2807374 32.500000 0 13 33 NCBI RefSeq GCF_000362505.1-RS_2026_03_09 2026-03-09 2850 2656 72 na GCF_000362525.1 PRJNA224116 SAMN00809053 AIYE00000000.1 na 1158711 1280 Staphylococcus aureus M1036 strain=M1036 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1036_V1 Broad Institute GCA_000362525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/525/GCF_000362525.1_Stap_aure_M1036_V1/ na na na haploid bacteria 2890996 2887074 33.000000 0 10 20 NCBI RefSeq GCF_000362525.1-RS_2025_01_30 2025-01-30 2899 2737 80 na GCF_000362545.1 PRJNA224116 SAMN00809054 AIYF00000000.1 na 1158712 1280 Staphylococcus aureus M1037 strain=M1037 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1037_V1 Broad Institute GCA_000362545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/545/GCF_000362545.1_Stap_aure_M1037_V1/ na na na haploid bacteria 2873202 2869750 33.000000 0 7 16 NCBI RefSeq GCF_000362545.1-RS_2025_01_29 2025-01-29 2889 2725 79 na GCF_000362565.1 PRJNA224116 SAMN00839745 AOAS00000000.1 na 1169260 1280 Staphylococcus aureus M1044 strain=M1044 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1044_V1 Broad Institute GCA_000362565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/565/GCF_000362565.1_Stap_aure_M1044_V1/ na na na haploid bacteria 2862180 2851627 33.000000 0 19 28 NCBI RefSeq GCF_000362565.1-RS_2025_01_09 2025-01-09 2865 2711 71 na GCF_000362585.1 PRJNA224116 SAMN00839746 AOAT00000000.1 na 1169261 1280 Staphylococcus aureus M1061 strain=M1061 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1061_V1 Broad Institute GCA_000362585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/585/GCF_000362585.1_Stap_aure_M1061_V1/ na na na haploid bacteria 2931319 2909182 33.000000 0 11 20 NCBI RefSeq GCF_000362585.1-RS_2026_03_09 2026-03-09 2932 2774 82 na GCF_000362605.1 PRJNA224116 SAMN00839747 AOAU00000000.1 na 1169262 1280 Staphylococcus aureus M1062 strain=M1062 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1062_V1 Broad Institute GCA_000362605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/605/GCF_000362605.1_Stap_aure_M1062_V1/ na na na haploid bacteria 2852217 2845446 33.000000 0 8 17 NCBI RefSeq GCF_000362605.1-RS_2026_03_09 2026-03-09 2866 2714 77 na GCF_000362625.1 PRJNA224116 SAMN00809083 AIYI00000000.1 na 1158463 1280 Staphylococcus aureus M1063 strain=M1063 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1063_V1 Broad Institute GCA_000362625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/625/GCF_000362625.1_Stap_aure_M1063_V1/ na na na haploid bacteria 2969409 2942954 33.000000 0 11 32 NCBI RefSeq GCF_000362625.1-RS_2025_01_09 2025-01-09 2997 2825 82 na GCF_000362645.1 PRJNA224116 SAMN00809092 AIYK00000000.1 na 1158465 1280 Staphylococcus aureus M1064 strain=M1064 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1064_V1 Broad Institute GCA_000362645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/645/GCF_000362645.1_Stap_aure_M1064_V1/ na na na haploid bacteria 2980462 2946064 32.500000 0 12 33 NCBI RefSeq GCF_000362645.1-RS_2026_03_09 2026-03-09 3004 2832 70 na GCF_000362665.1 PRJNA224116 SAMN00839748 AOAV00000000.1 na 1169263 1280 Staphylococcus aureus M1068 strain=M1068 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1068_V1 Broad Institute GCA_000362665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/665/GCF_000362665.1_Stap_aure_M1068_V1/ na na na haploid bacteria 2878549 2869650 33.000000 0 7 15 NCBI RefSeq GCF_000362665.1-RS_2025_01_09 2025-01-09 2890 2736 76 na GCF_000362685.1 PRJNA224116 SAMN00809091 AIYJ00000000.1 na 1158464 1280 Staphylococcus aureus M1076 strain=M1076 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1076_V1 Broad Institute GCA_000362685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/685/GCF_000362685.1_Stap_aure_M1076_V1/ na na na haploid bacteria 2912755 2900953 33.000000 0 6 18 NCBI RefSeq GCF_000362685.1-RS_2025_01_30 2025-01-30 2931 2778 77 na GCF_000362705.1 PRJNA224116 SAMN00839749 AOAW00000000.1 na 1169264 1280 Staphylococcus aureus M1083 strain=M1083 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1083_V1 Broad Institute GCA_000362705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/705/GCF_000362705.1_Stap_aure_M1083_V1/ na na na haploid bacteria 2866195 2833553 33.000000 0 10 23 NCBI RefSeq GCF_000362705.1-RS_2026_03_09 2026-03-09 2846 2692 77 na GCF_000362725.1 PRJNA224116 SAMN00809093 AIYL00000000.1 na 1158466 1280 Staphylococcus aureus M1092 strain=M1092 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1092_V1 Broad Institute GCA_000362725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/725/GCF_000362725.1_Stap_aure_M1092_V1/ na na na haploid bacteria 2891708 2871589 33.000000 0 9 25 NCBI RefSeq GCF_000362725.1-RS_2025_01_09 2025-01-09 2887 2717 82 na GCF_000362745.1 PRJNA224116 SAMN00809094 AIYM00000000.1 na 1158467 1280 Staphylococcus aureus M1093 strain=M1093 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1093_V1 Broad Institute GCA_000362745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/745/GCF_000362745.1_Stap_aure_M1093_V1/ na na na haploid bacteria 2790532 2781802 33.000000 0 5 18 NCBI RefSeq GCF_000362745.1-RS_2026_03_09 2026-03-09 2768 2623 76 na GCF_000362765.1 PRJNA224116 SAMN00809095 AIYN00000000.1 na 1158468 1280 Staphylococcus aureus M1095 strain=M1095 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1095_V1 Broad Institute GCA_000362765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/765/GCF_000362765.1_Stap_aure_M1095_V1/ na na na haploid bacteria 2981262 2971462 33.000000 0 12 36 NCBI RefSeq GCF_000362765.1-RS_2025_01_09 2025-01-09 3046 2867 84 na GCF_000362785.1 PRJNA224116 SAMN00809096 AIYO00000000.1 na 1158469 1280 Staphylococcus aureus M1103 strain=M1103 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1103_V1 Broad Institute GCA_000362785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/785/GCF_000362785.1_Stap_aure_M1103_V1/ na na na haploid bacteria 2926942 2902966 33.000000 0 8 23 NCBI RefSeq GCF_000362785.1-RS_2026_03_09 2026-03-09 2958 2788 89 na GCF_000362805.1 PRJNA224116 SAMN00839750 AOAX00000000.1 na 1169265 1280 Staphylococcus aureus M1109 strain=M1109 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1109_V1 Broad Institute GCA_000362805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/805/GCF_000362805.1_Stap_aure_M1109_V1/ na na na haploid bacteria 2990757 2953670 33.000000 0 14 28 NCBI RefSeq GCF_000362805.1-RS_2026_03_09 2026-03-09 3012 2844 82 na GCF_000362825.1 PRJNA224116 SAMN00809062 AIYP00000000.1 na 1158470 1280 Staphylococcus aureus M1119 strain=M1119 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1119_V1 Broad Institute GCA_000362825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/825/GCF_000362825.1_Stap_aure_M1119_V1/ na na na haploid bacteria 2944185 2894821 33.000000 0 13 46 NCBI RefSeq GCF_000362825.1-RS_2025_01_09 2025-01-09 2941 2769 74 na GCF_000362845.1 PRJNA224116 SAMN00839751 AOAY00000000.1 na 1169266 1280 Staphylococcus aureus M1126 strain=M1126 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1126_V1 Broad Institute GCA_000362845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/845/GCF_000362845.1_Stap_aure_M1126_V1/ na na na haploid bacteria 2818324 2812214 33.000000 0 16 26 NCBI RefSeq GCF_000362845.1-RS_2026_03_09 2026-03-09 2843 2680 76 na GCF_000362865.1 PRJNA224116 SAMN00839752 AOAZ00000000.1 na 1169267 1280 Staphylococcus aureus M1142 strain=M1142 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1142_V1 Broad Institute GCA_000362865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/865/GCF_000362865.1_Stap_aure_M1142_V1/ na na na haploid bacteria 2846099 2838693 33.000000 0 3 18 NCBI RefSeq GCF_000362865.1-RS_2025_01_09 2025-01-09 2828 2673 76 na GCF_000362885.1 PRJNA224116 SAMN00809063 AIYQ00000000.1 na 1158471 1280 Staphylococcus aureus M1167 strain=M1167 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1167_V1 Broad Institute GCA_000362885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/885/GCF_000362885.1_Stap_aure_M1167_V1/ na na na haploid bacteria 2861326 2853741 33.000000 0 9 18 NCBI RefSeq GCF_000362885.1-RS_2026_02_24 2026-02-24 2874 2718 74 na GCF_000362905.1 PRJNA224116 SAMN00809064 AIYR00000000.1 na 1158472 1280 Staphylococcus aureus M1170 strain=M1170 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1170_V1 Broad Institute GCA_000362905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/905/GCF_000362905.1_Stap_aure_M1170_V1/ na na na haploid bacteria 2898612 2877454 33.000000 0 2 22 NCBI RefSeq GCF_000362905.1-RS_2025_01_30 2025-01-30 2881 2742 71 na GCF_000362925.1 PRJNA224116 SAMN00809065 AIYS00000000.1 na 1158473 1280 Staphylococcus aureus M1188 strain=M1188 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1188_V1 Broad Institute GCA_000362925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/925/GCF_000362925.1_Stap_aure_M1188_V1/ na na na haploid bacteria 2888041 2876745 33.000000 0 5 21 NCBI RefSeq GCF_000362925.1-RS_2025_01_29 2025-01-29 2906 2756 70 na GCF_000362945.1 PRJNA224116 SAMN00809066 AIYT00000000.1 na 1158474 1280 Staphylococcus aureus M1198 strain=M1198 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1198_V1 Broad Institute GCA_000362945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/945/GCF_000362945.1_Stap_aure_M1198_V1/ na na na haploid bacteria 2865564 2864366 33.000000 0 6 13 NCBI RefSeq GCF_000362945.1-RS_2026_02_24 2026-02-24 2888 2739 75 na GCF_000362965.1 PRJNA224116 SAMN00809067 AIYU00000000.1 na 1158475 1280 Staphylococcus aureus M1199 strain=M1199 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1199_V1 Broad Institute GCA_000362965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/965/GCF_000362965.1_Stap_aure_M1199_V1/ na na na haploid bacteria 2940354 2903312 33.000000 0 5 28 NCBI RefSeq GCF_000362965.1-RS_2025_01_09 2025-01-09 2946 2781 82 na GCF_000362985.1 PRJNA224116 SAMN00809068 AIYV00000000.1 na 1158476 1280 Staphylococcus aureus M1215 strain=M1215 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1215_V1 Broad Institute GCA_000362985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/362/985/GCF_000362985.1_Stap_aure_M1215_V1/ na na na haploid bacteria 2854793 2839283 33.000000 0 2 18 NCBI RefSeq GCF_000362985.1-RS_2025_01_29 2025-01-29 2865 2709 76 na GCF_000363005.1 PRJNA224116 SAMN00809069 AIYW00000000.1 na 1158477 1280 Staphylococcus aureus M1216 strain=M1216 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1216_V1 Broad Institute GCA_000363005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/005/GCF_000363005.1_Stap_aure_M1216_V1/ na na na haploid bacteria 2793375 2786577 33.000000 0 1 20 NCBI RefSeq GCF_000363005.1-RS_2026_03_09 2026-03-09 2765 2609 75 na GCF_000363025.1 PRJNA224116 SAMN00839753 AOBA00000000.1 na 1169268 1280 Staphylococcus aureus M1223 strain=M1223 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1223_V1 Broad Institute GCA_000363025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/025/GCF_000363025.1_Stap_aure_M1223_V1/ na na na haploid bacteria 2952970 2915775 33.000000 0 4 23 NCBI RefSeq GCF_000363025.1-RS_2025_01_09 2025-01-09 2972 2803 74 na GCF_000363045.1 PRJNA224116 SAMN00839754 AOBB00000000.1 na 1169269 1280 Staphylococcus aureus M1224 strain=M1224 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1224_V1 Broad Institute GCA_000363045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/045/GCF_000363045.1_Stap_aure_M1224_V1/ na na na haploid bacteria 2876093 2866074 33.000000 0 10 20 NCBI RefSeq GCF_000363045.1-RS_2025_01_29 2025-01-29 2890 2729 81 na GCF_000363065.1 PRJNA224116 SAMN00809070 AIYX00000000.1 na 1158478 1280 Staphylococcus aureus M1229 strain=M1229 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1229_V1 Broad Institute GCA_000363065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/065/GCF_000363065.1_Stap_aure_M1229_V1/ na na na haploid bacteria 2841363 2833473 33.000000 0 4 14 NCBI RefSeq GCF_000363065.1-RS_2025_01_30 2025-01-30 2856 2712 71 na GCF_000363085.1 PRJNA224116 SAMN00839755 AOBC00000000.1 na 1169270 1280 Staphylococcus aureus M1244 strain=M1244 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1244_V1 Broad Institute GCA_000363085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/085/GCF_000363085.1_Stap_aure_M1244_V1/ na na na haploid bacteria 2959616 2934570 33.000000 0 13 37 NCBI RefSeq GCF_000363085.1-RS_2026_03_09 2026-03-09 2997 2821 83 na GCF_000363105.1 PRJNA224116 SAMN00809071 AIYY00000000.1 na 1158479 1280 Staphylococcus aureus M1248 strain=M1248 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1248_V1 Broad Institute GCA_000363105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/105/GCF_000363105.1_Stap_aure_M1248_V1/ na na na haploid bacteria 2857414 2845733 33.000000 0 9 18 NCBI RefSeq GCF_000363105.1-RS_2026_03_09 2026-03-09 2863 2706 80 na GCF_000363125.1 PRJNA224116 SAMN00809073 AIYZ00000000.1 na 1158480 1280 Staphylococcus aureus M1253 strain=M1253 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1253_V1 Broad Institute GCA_000363125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/125/GCF_000363125.1_Stap_aure_M1253_V1/ na na na haploid bacteria 2910826 2889911 33.000000 0 2 13 NCBI RefSeq GCF_000363125.1-RS_2025_01_30 2025-01-30 2895 2747 77 na GCF_000363145.1 PRJNA224116 SAMN00809074 AIZA00000000.1 na 1158481 1280 Staphylococcus aureus M1255 strain=M1255 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1255_V1 Broad Institute GCA_000363145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/145/GCF_000363145.1_Stap_aure_M1255_V1/ na na na haploid bacteria 2944157 2931884 33.000000 0 9 30 NCBI RefSeq GCF_000363145.1-RS_2026_03_08 2026-03-08 2972 2818 78 na GCF_000363165.1 PRJNA224116 SAMN00839756 AOBD00000000.1 na 1169271 1280 Staphylococcus aureus M1256 strain=M1256 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1256_V1 Broad Institute GCA_000363165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/165/GCF_000363165.1_Stap_aure_M1256_V1/ na na na haploid bacteria 2803124 2788883 33.000000 0 2 15 NCBI RefSeq GCF_000363165.1-RS_2025_01_09 2025-01-09 2768 2593 68 na GCF_000363185.1 PRJNA224116 SAMN00809075 AIZB00000000.1 na 1158482 1280 Staphylococcus aureus M1257 strain=M1257 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1257_V1 Broad Institute GCA_000363185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/185/GCF_000363185.1_Stap_aure_M1257_V1/ na na na haploid bacteria 2843681 2842786 33.000000 0 5 13 NCBI RefSeq GCF_000363185.1-RS_2026_03_09 2026-03-09 2853 2694 80 na GCF_000363205.1 PRJNA224116 SAMN00839757 AOBE00000000.1 na 1169272 1280 Staphylococcus aureus M1275 strain=M1275 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1275_V1 Broad Institute GCA_000363205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/205/GCF_000363205.1_Stap_aure_M1275_V1/ na na na haploid bacteria 2886029 2883761 33.000000 0 6 12 NCBI RefSeq GCF_000363205.1-RS_2026_03_08 2026-03-08 2899 2737 84 na GCF_000363225.1 PRJNA224116 SAMN00809076 AIZC00000000.1 na 1158483 1280 Staphylococcus aureus M1277 strain=M1277 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1277_V1 Broad Institute GCA_000363225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/225/GCF_000363225.1_Stap_aure_M1277_V1/ na na na haploid bacteria 2861322 2841276 33.000000 0 5 29 NCBI RefSeq GCF_000363225.1-RS_2025_01_09 2025-01-09 2876 2716 75 na GCF_000363245.1 PRJNA224116 SAMN00839758 AOBF00000000.1 na 1169273 1280 Staphylococcus aureus M1286 strain=M1286 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1286_V1 Broad Institute GCA_000363245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/245/GCF_000363245.1_Stap_aure_M1286_V1/ na na na haploid bacteria 2857462 2852007 33.000000 0 15 22 NCBI RefSeq GCF_000363245.1-RS_2026_03_08 2026-03-08 2865 2711 77 na GCF_000363265.1 PRJNA224116 SAMN00809077 AIZD00000000.1 na 1158484 1280 Staphylococcus aureus M1291 strain=M1291 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1291_V1 Broad Institute GCA_000363265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/265/GCF_000363265.1_Stap_aure_M1291_V1/ na na na haploid bacteria 2868999 2855434 33.000000 0 10 26 NCBI RefSeq GCF_000363265.1-RS_2025_01_09 2025-01-09 2857 2699 79 na GCF_000363285.1 PRJNA224116 SAMN00839759 AOBG00000000.1 na 1169274 1280 Staphylococcus aureus M1309 strain=M1309 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1309_V1 Broad Institute GCA_000363285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/285/GCF_000363285.1_Stap_aure_M1309_V1/ na na na haploid bacteria 2897073 2895488 33.000000 0 9 11 NCBI RefSeq GCF_000363285.1-RS_2026_03_09 2026-03-09 2929 2767 82 na GCF_000363305.1 PRJNA224116 SAMN00809078 AIZE00000000.1 na 1158485 1280 Staphylococcus aureus M1311 strain=M1311 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1311_V1 Broad Institute GCA_000363305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/305/GCF_000363305.1_Stap_aure_M1311_V1/ na na na haploid bacteria 2831761 2819635 33.000000 0 7 23 NCBI RefSeq GCF_000363305.1-RS_2026_03_08 2026-03-08 2834 2657 74 na GCF_000363325.1 PRJNA224116 SAMN00809079 AIZF00000000.1 na 1158486 1280 Staphylococcus aureus M1320 strain=M1320 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1320_V1 Broad Institute GCA_000363325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/325/GCF_000363325.1_Stap_aure_M1320_V1/ na na na haploid bacteria 2842152 2833465 33.000000 0 4 17 NCBI RefSeq GCF_000363325.1-RS_2025_01_30 2025-01-30 2855 2700 78 na GCF_000363345.1 PRJNA224116 SAMN00809080 AIZG00000000.1 na 1158487 1280 Staphylococcus aureus M1321 strain=M1321 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1321_V1 Broad Institute GCA_000363345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/345/GCF_000363345.1_Stap_aure_M1321_V1/ na na na haploid bacteria 2951747 2935393 33.000000 0 14 32 NCBI RefSeq GCF_000363345.1-RS_2026_03_08 2026-03-08 2986 2832 69 na GCF_000363365.1 PRJNA224116 SAMN00809081 AIZH00000000.1 na 1158488 1280 Staphylococcus aureus M1322 strain=M1322 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1322_V1 Broad Institute GCA_000363365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/365/GCF_000363365.1_Stap_aure_M1322_V1/ na na na haploid bacteria 2852986 2847951 33.000000 0 4 12 NCBI RefSeq GCF_000363365.1-RS_2025_01_30 2025-01-30 2845 2696 70 na GCF_000363385.1 PRJNA224116 SAMN00809082 AIZI00000000.1 na 1158489 1280 Staphylococcus aureus M1359 strain=M1359 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1359_V1 Broad Institute GCA_000363385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/385/GCF_000363385.1_Stap_aure_M1359_V1/ na na na haploid bacteria 2892583 2834486 33.000000 0 3 35 NCBI RefSeq GCF_000363385.1-RS_2026_02_24 2026-02-24 2861 2709 77 na GCF_000363405.1 PRJNA224116 SAMN00809084 AIZJ00000000.1 na 1158490 1280 Staphylococcus aureus M1367 strain=M1367 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1367_V1 Broad Institute GCA_000363405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/405/GCF_000363405.1_Stap_aure_M1367_V1/ na na na haploid bacteria 2906449 2895235 33.000000 0 3 13 NCBI RefSeq GCF_000363405.1-RS_2026_03_08 2026-03-08 2920 2759 82 na GCF_000363425.1 PRJNA224116 SAMN00809085 AIZK00000000.1 na 1158491 1280 Staphylococcus aureus M1373 strain=M1373 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1373_V1 Broad Institute GCA_000363425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/425/GCF_000363425.1_Stap_aure_M1373_V1/ na na na haploid bacteria 2913034 2884767 33.000000 0 8 42 NCBI RefSeq GCF_000363425.1-RS_2025_01_09 2025-01-09 2936 2778 78 na GCF_000363445.1 PRJNA224116 SAMN00839760 AOBH00000000.1 na 1169275 1280 Staphylococcus aureus M1374 strain=M1374 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1374_V1 Broad Institute GCA_000363445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/445/GCF_000363445.1_Stap_aure_M1374_V1/ na na na haploid bacteria 2850448 2849777 33.000000 0 10 19 NCBI RefSeq GCF_000363445.1-RS_2026_03_08 2026-03-08 2869 2713 76 na GCF_000363465.1 PRJNA224116 SAMN00809086 AIZL00000000.1 na 1158492 1280 Staphylococcus aureus M1394 strain=M1394 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1394_V1 Broad Institute GCA_000363465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/465/GCF_000363465.1_Stap_aure_M1394_V1/ na na na haploid bacteria 2838332 2828353 33.000000 0 2 15 NCBI RefSeq GCF_000363465.1-RS_2025_01_09 2025-01-09 2854 2701 81 na GCF_000363485.1 PRJNA224116 SAMN00839761 AOBI00000000.1 na 1169276 1280 Staphylococcus aureus M1405 strain=M1405 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1405_V1 Broad Institute GCA_000363485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/485/GCF_000363485.1_Stap_aure_M1405_V1/ na na na haploid bacteria 2873233 2860784 33.000000 0 15 25 NCBI RefSeq GCF_000363485.1-RS_2026_03_09 2026-03-09 2895 2736 74 na GCF_000363505.1 PRJNA224116 SAMN00809087 AIZM00000000.1 na 1158493 1280 Staphylococcus aureus M1450 strain=M1450 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1450_V1 Broad Institute GCA_000363505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/505/GCF_000363505.1_Stap_aure_M1450_V1/ na na na haploid bacteria 2867063 2861462 33.000000 0 11 21 NCBI RefSeq GCF_000363505.1-RS_2026_03_08 2026-03-08 2897 2750 76 na GCF_000363525.1 PRJNA224116 SAMN00809088 AIZN00000000.1 na 1158494 1280 Staphylococcus aureus M1451 strain=M1451 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1451_V1 Broad Institute GCA_000363525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/525/GCF_000363525.1_Stap_aure_M1451_V1/ na na na haploid bacteria 2900366 2873851 33.000000 0 7 19 NCBI RefSeq GCF_000363525.1-RS_2025_01_09 2025-01-09 2906 2740 80 na GCF_000363545.1 PRJNA224116 SAMN00809089 AIZO00000000.1 na 1158495 1280 Staphylococcus aureus M1462 strain=M1462 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1462_V1 Broad Institute GCA_000363545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/545/GCF_000363545.1_Stap_aure_M1462_V1/ na na na haploid bacteria 2937962 2926557 33.000000 0 4 14 NCBI RefSeq GCF_000363545.1-RS_2026_03_08 2026-03-08 2949 2777 71 na GCF_000363565.1 PRJNA224116 SAMN00809090 AIZP00000000.1 na 1158496 1280 Staphylococcus aureus M1463 strain=M1463 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1463_V1 Broad Institute GCA_000363565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/565/GCF_000363565.1_Stap_aure_M1463_V1/ na na na haploid bacteria 2875053 2872253 33.000000 0 11 18 NCBI RefSeq GCF_000363565.1-RS_2025_01_09 2025-01-09 2885 2709 79 na GCF_000363585.1 PRJNA224116 SAMN00809155 AJBO00000000.1 na 1158497 1280 Staphylococcus aureus M1481 strain=M1481 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1481_V1 Broad Institute GCA_000363585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/585/GCF_000363585.1_Stap_aure_M1481_V1/ na na na haploid bacteria 2868095 2865483 33.000000 0 9 16 NCBI RefSeq GCF_000363585.1-RS_2026_03_09 2026-03-09 2885 2729 81 na GCF_000363605.1 PRJNA224116 SAMN00839762 AOBJ00000000.1 na 1169277 1280 Staphylococcus aureus M1510 strain=M1510 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1510_V1 Broad Institute GCA_000363605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/605/GCF_000363605.1_Stap_aure_M1510_V1/ na na na haploid bacteria 2929393 2924271 33.000000 0 6 13 NCBI RefSeq GCF_000363605.1-RS_2026_03_08 2026-03-08 2963 2807 78 na GCF_000363625.1 PRJNA224116 SAMN00809166 AJBP00000000.1 na 1158498 1280 Staphylococcus aureus M1520 strain=M1520 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1520_V1 Broad Institute GCA_000363625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/625/GCF_000363625.1_Stap_aure_M1520_V1/ na na na haploid bacteria 2846176 2833336 33.000000 0 2 10 NCBI RefSeq GCF_000363625.1-RS_2025_01_30 2025-01-30 2814 2669 77 na GCF_000363645.1 PRJNA224116 SAMN00809177 AJBQ00000000.1 na 1158499 1280 Staphylococcus aureus M1521 strain=M1521 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1521_V1 Broad Institute GCA_000363645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/645/GCF_000363645.1_Stap_aure_M1521_V1/ na na na haploid bacteria 2918168 2900893 33.000000 0 6 13 NCBI RefSeq GCF_000363645.1-RS_2026_03_08 2026-03-08 2936 2777 80 na GCF_000363665.1 PRJNA224116 SAMN00809188 AJBR00000000.1 na 1158500 1280 Staphylococcus aureus M1531 strain=M1531 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1531_V1 Broad Institute GCA_000363665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/665/GCF_000363665.1_Stap_aure_M1531_V1/ na na na haploid bacteria 2835648 2826842 33.000000 0 3 11 NCBI RefSeq GCF_000363665.1-RS_2025_01_09 2025-01-09 2830 2675 74 na GCF_000363685.1 PRJNA224116 SAMN00809194 AJBS00000000.1 na 1158501 1280 Staphylococcus aureus M1533 strain=M1533 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1533_V1 Broad Institute GCA_000363685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/685/GCF_000363685.1_Stap_aure_M1533_V1/ na na na haploid bacteria 2839850 2837058 33.000000 0 7 12 NCBI RefSeq GCF_000363685.1-RS_2026_03_09 2026-03-09 2838 2679 82 na GCF_000363705.1 PRJNA224116 SAMN00809195 AJBT00000000.1 na 1158502 1280 Staphylococcus aureus M1544 strain=M1544 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1544_V1 Broad Institute GCA_000363705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/705/GCF_000363705.1_Stap_aure_M1544_V1/ na na na haploid bacteria 2917890 2906994 33.000000 0 11 26 NCBI RefSeq GCF_000363705.1-RS_2026_03_08 2026-03-08 2945 2785 80 na GCF_000363725.1 PRJNA224116 SAMN00809196 AJBU00000000.1 na 1158503 1280 Staphylococcus aureus M1556 strain=M1556 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1556_V1 Broad Institute GCA_000363725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/725/GCF_000363725.1_Stap_aure_M1556_V1/ na na na haploid bacteria 2895270 2881583 33.000000 0 7 15 NCBI RefSeq GCF_000363725.1-RS_2025_01_30 2025-01-30 2902 2746 71 na GCF_000363745.1 PRJNA224116 SAMN00809197 AJBV00000000.1 na 1158504 1280 Staphylococcus aureus M1563 strain=M1563 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1563_V1 Broad Institute GCA_000363745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/745/GCF_000363745.1_Stap_aure_M1563_V1/ na na na haploid bacteria 2863980 2848250 33.000000 0 7 17 NCBI RefSeq GCF_000363745.1-RS_2025_01_30 2025-01-30 2856 2689 78 na GCF_000363765.1 PRJNA224116 SAMN00809198 AJBW00000000.1 na 1158505 1280 Staphylococcus aureus M1565 strain=M1565 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1565_V1 Broad Institute GCA_000363765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/765/GCF_000363765.1_Stap_aure_M1565_V1/ na na na haploid bacteria 2872733 2860100 33.000000 0 5 17 NCBI RefSeq GCF_000363765.1-RS_2025_01_09 2025-01-09 2877 2719 82 na GCF_000363785.1 PRJNA224116 SAMN00809156 AJBX00000000.1 na 1158506 1280 Staphylococcus aureus M1578 strain=M1578 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1578_V1 Broad Institute GCA_000363785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/785/GCF_000363785.1_Stap_aure_M1578_V1/ na na na haploid bacteria 2917816 2902444 33.000000 0 5 18 NCBI RefSeq GCF_000363785.1-RS_2026_02_24 2026-02-24 2928 2775 77 na GCF_000363805.1 PRJNA224116 SAMN00792166 AIWZ00000000.1 na 1157039 1280 Staphylococcus aureus B147830 strain=B147830 na latest Scaffold Major Full 2013-04-12 Stap_aure_B147830_V1 Broad Institute GCA_000363805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/805/GCF_000363805.1_Stap_aure_B147830_V1/ na na na haploid bacteria 2894420 2882111 33.000000 0 9 28 NCBI RefSeq GCF_000363805.1-RS_2025_01_09 2025-01-09 2896 2755 54 na GCF_000363825.1 PRJNA224116 SAMN00792164 AIWX00000000.1 na 1157037 1280 Staphylococcus aureus B40723 strain=B40723 na latest Scaffold Major Full 2013-04-12 Stap_aure_B40723_V1 Broad Institute GCA_000363825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/825/GCF_000363825.1_Stap_aure_B40723_V1/ na na na haploid bacteria 2858664 2855022 33.000000 0 11 18 NCBI RefSeq GCF_000363825.1-RS_2025_01_09 2025-01-09 2893 2725 82 na GCF_000363845.1 PRJNA224116 SAMN00792165 AIWY00000000.1 na 1157038 1280 Staphylococcus aureus B40950 strain=B40950 na latest Scaffold Major Full 2013-04-12 Stap_aure_B40950_V1 Broad Institute GCA_000363845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/845/GCF_000363845.1_Stap_aure_B40950_V1/ na na na haploid bacteria 2841562 2838450 33.000000 0 5 16 NCBI RefSeq GCF_000363845.1-RS_2026_03_08 2026-03-08 2857 2692 81 na GCF_000363865.1 PRJNA224116 SAMN00792163 AIWW00000000.1 na 1157036 1280 Staphylococcus aureus B53639 strain=B53639 na latest Scaffold Major Full 2013-04-12 Stap_aure_B53639_V1 Broad Institute GCA_000363865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/865/GCF_000363865.1_Stap_aure_B53639_V1/ na na na haploid bacteria 2863934 2856799 33.000000 0 6 16 NCBI RefSeq GCF_000363865.1-RS_2025_01_09 2025-01-09 2888 2717 83 na GCF_000363885.1 PRJNA224116 SAMN02470129 APMM00000000.1 na 1069083 667126 Methanocaldococcus villosus KIN24-T80 strain=KIN24-T80 na latest Contig Major Full 2013-04-11 MethanoVillo1.0 King Abdullah University of Science and Technology GCA_000363885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/885/GCF_000363885.1_MethanoVillo1.0/ na assembly from type material na haploid archaea 1207361 1207361 29.500000 0 81 81 NCBI RefSeq GCF_000363885.1-RS_2025_12_02 2025-12-02 1403 1266 36 23846275 GCF_000363905.1 PRJNA224116 SAMN01983875 na na 1290427 782 Rickettsia prowazekii str. NMRC Madrid E strain=NMRC Madrid E na latest Complete Genome Major Full 2013-04-11 ASM36390v1 Naval Medical Research Center GCA_000363905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/905/GCF_000363905.1_ASM36390v1/ na na na haploid bacteria 1111520 1111520 29.000000 1 1 1 NCBI RefSeq GCF_000363905.1-RS_2026_01_08 2026-01-08 892 792 40 23814035 GCF_000363915.2 PRJNA224116 SAMN02471375 AUVF00000000.1 na 1087469 36809 Mycobacteroides abscessus subsp. bolletii INCQS 00594 strain=INCQS 00594 na latest Contig Minor Full 2013-09-18 MaINCQS00594_1.0 Rede Paraense de Genômica e Proteômica GCA_000363915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/915/GCF_000363915.2_MaINCQS00594_1.0/ na na na haploid bacteria 4941231 4941231 64.000000 1 84 84 NCBI RefSeq GCF_000363915.2-RS_2025_04_07 2025-04-07 4982 4803 52 23565273;24201191 GCF_000363985.1 PRJNA224116 SAMN02471034 APME00000000.1 na 1307437 176102 Pseudoalteromonas agarivorans S816 strain=S816 na latest Contig Major Full 2013-04-11 S816-1_1.0 Department of Systems Biology, Technical University of Denmark GCA_000363985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/363/985/GCF_000363985.1_S816-1_1.0/ na na na haploid bacteria 4424254 4424254 41.000000 0 133 133 NCBI RefSeq GCF_000363985.1-RS_2025_08_05 2025-08-05 4105 3927 93 na GCF_000364005.1 PRJNA224116 SAMN02596935 AQFY00000000.1 na 1303780 1280 Staphylococcus aureus M0075 strain=M0075 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0075_V1 Broad Institute GCA_000364005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/005/GCF_000364005.1_Stap_aure_M0075_V1/ na na na haploid bacteria 2871499 2866806 33.000000 0 5 16 NCBI RefSeq GCF_000364005.1-RS_2026_03_09 2026-03-09 2876 2720 76 na GCF_000364025.1 PRJNA224116 SAMN02596936 AQFZ00000000.1 na 1303781 1280 Staphylococcus aureus M0294 strain=M0294 na latest Scaffold Major Full 2013-04-12 Stap_aure_M0294_V1 Broad Institute GCA_000364025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/025/GCF_000364025.1_Stap_aure_M0294_V1/ na na na haploid bacteria 2914242 2887416 33.000000 0 10 27 NCBI RefSeq GCF_000364025.1-RS_2025_01_09 2025-01-09 2932 2771 82 na GCF_000364045.1 PRJNA224116 SAMN02596937 AQGA00000000.1 na 1303782 1280 Staphylococcus aureus M1060 strain=M1060 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1060_V1 Broad Institute GCA_000364045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/045/GCF_000364045.1_Stap_aure_M1060_V1/ na na na haploid bacteria 2907360 2881536 33.000000 0 5 19 NCBI RefSeq GCF_000364045.1-RS_2025_01_30 2025-01-30 2902 2748 75 na GCF_000364065.1 PRJNA224116 SAMN02596938 AQGB00000000.1 na 1303783 1280 Staphylococcus aureus M1078 strain=M1078 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1078_V1 Broad Institute GCA_000364065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/065/GCF_000364065.1_Stap_aure_M1078_V1/ na na na haploid bacteria 2882239 2844917 33.000000 0 6 26 NCBI RefSeq GCF_000364065.1-RS_2025_02_04 2025-02-04 2853 2696 76 na GCF_000364085.1 PRJNA224116 SAMN02596939 AQGC00000000.1 na 1303784 1280 Staphylococcus aureus M1193 strain=M1193 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1193_V1 Broad Institute GCA_000364085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/085/GCF_000364085.1_Stap_aure_M1193_V1/ na na na haploid bacteria 2873411 2858776 33.000000 0 3 12 NCBI RefSeq GCF_000364085.1-RS_2025_01_30 2025-01-30 2874 2723 76 na GCF_000364105.1 PRJNA224116 SAMN02596940 AQGD00000000.1 na 1303785 1280 Staphylococcus aureus M1228 strain=M1228 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1228_V1 Broad Institute GCA_000364105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/105/GCF_000364105.1_Stap_aure_M1228_V1/ na na na haploid bacteria 2836019 2805480 32.500000 0 3 28 NCBI RefSeq GCF_000364105.1-RS_2025_01_30 2025-01-30 2792 2636 67 na GCF_000364125.1 PRJNA224116 SAMN02596941 AQGE00000000.1 na 1303786 1280 Staphylococcus aureus M1407 strain=M1407 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1407_V1 Broad Institute GCA_000364125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/125/GCF_000364125.1_Stap_aure_M1407_V1/ na na na haploid bacteria 2835415 2829980 33.000000 0 3 11 NCBI RefSeq GCF_000364125.1-RS_2025_01_30 2025-01-30 2830 2681 78 na GCF_000364145.1 PRJNA224116 SAMN02596942 AQGF00000000.1 na 1303787 1280 Staphylococcus aureus M1466 strain=M1466 na latest Scaffold Major Full 2013-04-12 Stap_aure_M1466_V1 Broad Institute GCA_000364145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/145/GCF_000364145.1_Stap_aure_M1466_V1/ na na na haploid bacteria 2967356 2957709 33.000000 0 20 38 NCBI RefSeq GCF_000364145.1-RS_2025_01_09 2025-01-09 3033 2875 79 na GCF_000364165.2 PRJNA224116 SAMN01731003 na na 97138 97138 Clostridium sp. MD294 strain=ASF356 na latest Complete Genome Major Full 2022-06-15 ASM36416v2 Broad Institute GCA_000364165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/165/GCF_000364165.2_ASM36416v2/ na na na haploid bacteria 2924599 2924599 31.000000 1 1 1 NCBI RefSeq GCF_000364165.2-RS_2024_06_29 2024-06-29 2904 2782 76 24723722 GCF_000364205.2 PRJNA224116 SAMN01731005 na na 1235801 1622 Ligilactobacillus murinus ASF361 strain=ASF361 na latest Complete Genome Major Full 2022-06-15 ASM36420v2 Broad Institute GCA_000364205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/205/GCF_000364205.2_ASM36420v2/ na na na haploid bacteria 2237771 2237771 40.000000 1 1 1 NCBI RefSeq GCF_000364205.2-RS_2026_06_20 2026-06-20 2249 2079 86 24723722 GCF_000364265.2 PRJNA224116 SAMN01731008 AQFV00000000.2 na 1235803 1235803 Parabacteroides sp. ASF519 strain=ASF519 na latest Contig Major Full 2022-06-06 ASM36426v2 Broad Institute GCA_000364265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/265/GCF_000364265.2_ASM36426v2/ na na na haploid bacteria 6937625 6937625 43.500000 0 6 6 NCBI RefSeq GCF_000364265.2-RS_2024_06_23 2024-06-23 5537 5279 98 24723722 GCF_000364285.1 PRJNA224116 SAMN01731009 AQFW00000000.1 reference genome 1235804 37372 Helicobacter bilis WiWa strain=WiWa na latest Scaffold Major Full 2013-04-12 Heli_bili_WiWa_V1 Broad Institute GCA_000364285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/285/GCF_000364285.1_Heli_bili_WiWa_V1/ na na na haploid bacteria 2559659 2548580 35.000000 0 17 33 NCBI RefSeq GCF_000364285.1-RS_2025_12_11 2025-12-11 2483 2359 52 na GCF_000364305.1 PRJNA224116 SAMN01731010 AQFX00000000.1 na 1235805 562 Escherichia coli SWW33 strain=SWW33 na latest Scaffold Major Full 2013-04-12 Esch_coli_SWW33_V1 Broad Institute GCA_000364305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/305/GCF_000364305.1_Esch_coli_SWW33_V1/ na na na haploid bacteria 4881405 4855080 50.500000 0 11 38 NCBI RefSeq GCF_000364305.1-RS_2025_06_13 2025-06-13 4690 4429 113 na GCF_000364325.1 PRJNA224116 SAMN02596754 AGXC00000000.1 reference genome 997872 1381 Atopobium minutum 10063974 strain=10063974 na latest Scaffold Major Full 2013-04-12 Atop_minu_V1 Broad Institute GCA_000364325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/325/GCF_000364325.1_Atop_minu_V1/ na na na haploid bacteria 1706966 1706361 49.000000 0 2 3 NCBI RefSeq GCF_000364325.1-RS_2025_12_12 2025-12-12 1585 1522 54 na GCF_000364405.1 PRJNA224116 SAMN02470905 AKIG00000000.1 na 1168288 1168288 Mycobacterium sp. H4Y strain=H4Y na latest Scaffold Major Full 2013-01-17 ASM36440v1 Seoul National University College of Medicine GCA_000364405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/405/GCF_000364405.1_ASM36440v1/ na na na haploid bacteria 5443025 5443025 68.000000 1 4 4 NCBI RefSeq GCF_000364405.1-RS_2024_05_25 2024-05-25 5107 4936 53 23472222 GCF_000364425.1 PRJNA224116 SAMN02393726 AMWZ00000000.1 na 1163385 35772 Peanut witches'-broom phytoplasma NTU2011 strain=NTU2011 na latest Contig Major Full 2013-03-26 ASM36442v1 Academia Sinica GCA_000364425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/425/GCF_000364425.1_ASM36442v1/ na na na haploid bacteria 566694 566694 24.500000 1 14 14 NCBI RefSeq GCF_000364425.1-RS_2025_04_26 2025-04-26 502 445 34 23626855 GCF_000364445.2 PRJNA224116 SAMN02471377 na na 908290 39956 Methylobacterium mesophilicum SR1.6/6 strain=SR1.6/6 na latest Complete Genome Major Full 2019-12-18 ASM36444v2 Rede Paraense de genômica e proteômica GCA_000364445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/445/GCF_000364445.2_ASM36444v2/ na na na haploid bacteria 6555179 6555179 69.500000 1 1 1 NCBI RefSeq GCF_000364445.2-RS_2025_06_10 2025-06-10 6347 6132 58 22481887;23788544 GCF_000364465.1 PRJNA224116 SAMN01906554 AOFW00000000.1 na 1278075 1280 Staphylococcus aureus LVP5 strain=LVP5 na latest Contig Major Full 2013-04-12 S.aureus LVP5 National Center for Biological Sciences GCA_000364465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/465/GCF_000364465.1_S.aureus_LVP5/ na na na haploid bacteria 2757664 2757664 33.000000 0 29 29 NCBI RefSeq GCF_000364465.1-RS_2026_03_09 2026-03-09 2795 2664 67 na GCF_000364485.1 PRJNA224116 SAMN01923432 AOFX00000000.1 na 1278074 1280 Staphylococcus aureus VH221 strain=VH221 na latest Contig Major Full 2013-04-12 S.aureus VH221 National Center for Biological Sciences GCA_000364485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/485/GCF_000364485.1_S.aureus_VH221/ na na na haploid bacteria 2748523 2748523 32.500000 0 111 111 NCBI RefSeq GCF_000364485.1-RS_2025_01_09 2025-01-09 2807 2675 62 na GCF_000364505.1 PRJNA224116 SAMN01923433 AOFU00000000.1 na 1278071 1280 Staphylococcus aureus 3957 strain=3957 na latest Contig Major Full 2013-04-12 S.aureus 3957 National Center for Biological Sciences GCA_000364505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/505/GCF_000364505.1_S.aureus_3957/ na na na haploid bacteria 2808173 2808173 32.500000 0 43 43 NCBI RefSeq GCF_000364505.1-RS_2025_01_09 2025-01-09 2825 2677 64 na GCF_000364525.1 PRJNA224116 SAMN01906553 AOFV00000000.1 na 1278072 1280 Staphylococcus aureus LVP2 strain=LVP2 na latest Contig Major Full 2013-04-12 S.aureus LVP2 National Center for Biological Sciences GCA_000364525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/525/GCF_000364525.1_S.aureus_LVP2/ na na na haploid bacteria 2860791 2860791 32.500000 0 73 73 NCBI RefSeq GCF_000364525.1-RS_2025_01_09 2025-01-09 2918 2758 66 na GCF_000364565.1 PRJNA224116 SAMN02441754 AQPB00000000.1 na 1266908 1266908 Thioalkalivibrio sp. ALE6 strain=ALE6 na latest Contig Major Full 2013-04-15 ASM36456v1 DOE Joint Genome Institute GCA_000364565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/565/GCF_000364565.1_ASM36456v1/ na na na haploid bacteria 2963704 2963704 67.000000 0 61 61 NCBI RefSeq GCF_000364565.1-RS_2024_08_13 2024-08-13 2909 2804 52 na GCF_000364605.1 PRJNA224116 SAMN02441410 AQOZ00000000.1 na 1283287 1283287 Nocardioides sp. Iso805N strain=Iso805N na latest Scaffold Major Full 2013-04-15 ASM36460v1 DOE Joint Genome Institute GCA_000364605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/605/GCF_000364605.1_ASM36460v1/ na na na haploid bacteria 4434130 4433990 70.000000 0 24 29 NCBI RefSeq GCF_000364605.1-RS_2025_08_25 2025-08-25 4232 4156 61 na GCF_000364625.1 PRJNA224116 SAMN02441073 AQPA00000000.1 reference genome 1123021 157784 Pseudomonas thermotolerans DSM 14292 strain=DSM 14292 na latest Scaffold Major Full 2013-04-15 ASM36462v1 DOE Joint Genome Institute GCA_000364625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/625/GCF_000364625.1_ASM36462v1/ na assembly from type material na haploid bacteria 3752096 3748729 67.000000 0 75 77 NCBI RefSeq GCF_000364625.1-RS_2026_03_31 2026-03-31 3651 3501 66 na GCF_000364645.1 PRJNA224116 SAMN02469648 AQOK00000000.1 na 1591201 1591201 Xanthomonas sp. SHU 308 strain=SHU 308 na latest Contig Major Full 2013-04-15 SHU308 Colorado State University GCA_000364645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/645/GCF_000364645.1_SHU308/ na na na haploid bacteria 4855383 4855383 69.000000 0 915 915 NCBI RefSeq GCF_000364645.1-RS_2024_05_12 2024-05-12 4722 4340 52 na GCF_000364665.1 PRJNA224116 SAMN02469647 AQOI00000000.1 na 1591174 1591174 Xanthomonas sp. SHU 199 strain=SHU 199 na latest Contig Major Full 2013-04-15 SHU199 Colorado State University GCA_000364665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/665/GCF_000364665.1_SHU199/ na na na haploid bacteria 4837222 4837222 69.000000 0 880 880 NCBI RefSeq GCF_000364665.1-RS_2025_08_18 2025-08-18 4674 4347 56 na GCF_000364685.1 PRJNA224116 SAMN02469642 AQOJ00000000.1 na 1591170 1591170 Xanthomonas sp. SHU 166 strain=SHU 166 na latest Contig Major Full 2013-04-15 SHU166 Colorado State University GCA_000364685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/685/GCF_000364685.1_SHU166/ na na na haploid bacteria 4705097 4705097 69.000000 0 1024 1024 NCBI RefSeq GCF_000364685.1-RS_2024_05_05 2024-05-05 4667 4242 56 na GCF_000364705.1 PRJNA224116 SAMN02469640 AQOH00000000.1 na 1316934 53407 Pseudomonas fuscovaginae SE-1 strain=SE-1 na latest Contig Major Full 2013-04-15 Pseudomonas fuscovaginae SE-1 Colorado State University GCA_000364705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/705/GCF_000364705.1_Pseudomonas_fuscovaginae_SE-1/ na na na haploid bacteria 6525804 6525804 63.000000 0 407 407 NCBI RefSeq GCF_000364705.1-RS_2025_05_05 2025-05-05 6029 5786 49 na GCF_000364725.1 PRJNA224116 SAMN02603332 na reference genome 1234603 1048758 Candidatus Moranella endobia PCVAL strain=PCVAL na latest Complete Genome Major Full 2013-04-15 ASM36472v1 ICBiBE (University of Valencia) GCA_000364725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/725/GCF_000364725.1_ASM36472v1/ na na na haploid bacteria 538203 538203 43.500000 1 1 1 NCBI RefSeq GCF_000364725.1-RS_2026_03_31 2026-03-31 484 404 49 23548081 GCF_000364745.1 PRJNA224116 SAMN02603709 na na 1241935 43080 Saccharolobus islandicus LAL14/1 strain=LAL14/1 na latest Complete Genome Major Full 2013-04-15 ASM36474v1 Pasteur Institute, Paris, France GCA_000364745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/745/GCF_000364745.1_ASM36474v1/ na na na haploid archaea 2465177 2465177 35.000000 1 1 1 NCBI RefSeq GCF_000364745.1-RS_2025_12_22 2025-12-22 2761 2551 51 23594878 GCF_000364765.1 PRJNA224116 SAMN02603648 na na 1263406 813 Chlamydia trachomatis L2/434/Bu(i) strain=L2/434/Bu(i) na latest Complete Genome Major Full 2013-04-15 ASM36476v1 National Institute of Health, Portugal GCA_000364765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/765/GCF_000364765.1_ASM36476v1/ na na na haploid bacteria 1046341 1046341 41.500000 2 2 2 NCBI RefSeq GCF_000364765.1-RS_2025_04_19 2025-04-19 955 887 46 23542454 GCF_000364785.1 PRJNA224116 SAMN02603649 na na 1262673 813 Chlamydia trachomatis L2/434/Bu(f) strain=L2/434/Bu(f) na latest Complete Genome Major Full 2013-04-15 ASM36478v1 National Institute of Health, Portugal GCA_000364785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/785/GCF_000364785.1_ASM36478v1/ na na na haploid bacteria 1046341 1046341 41.500000 2 2 2 NCBI RefSeq GCF_000364785.1-RS_2025_04_19 2025-04-19 955 887 46 23542454 GCF_000364805.1 PRJNA224116 SAMN02180670 na na 1265601 1265601 Streptomyces sp. PAMC 26508 strain=PAMC 26508 na latest Complete Genome Major Full 2013-04-15 ASM36480v1 Korea Polar Research Institute GCA_000364805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/805/GCF_000364805.1_ASM36480v1/ na na na haploid bacteria 7630245 7630245 71.000000 2 2 2 NCBI RefSeq GCF_000364805.1-RS_2026_03_19 2026-03-19 6743 6506 88 na GCF_000364845.1 PRJNA224116 SAMN02469788 APLQ00000000.1 reference genome 626887 1305740 Marinobacter nanhaiticus D15-8W strain=D15-8W na latest Scaffold Major Full 2013-04-15 D15-8W.seq.sqn for a Marinobacter nanhaiticus assembly, version 1.0 First Institute of Oceanography, State Oceanic Administration of China GCA_000364845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/845/GCF_000364845.1_D15-8W.seq.sqn_for_a_Marinobacter_nanhaiticus_assembly_version_1.0/ na assembly from type material na haploid bacteria 5358909 5358309 58.500000 0 8 14 NCBI RefSeq GCF_000364845.1-RS_2025_11_26 2025-11-26 4835 4751 54 23723401 GCF_000364865.1 PRJNA224116 SAMN00260255 AQHZ00000000.1 na 888050 181487 Schaalia cardiffensis F0333 strain=F0333 na latest Scaffold Major Full 2013-04-15 ASM36486v1 Baylor College of Medicine GCA_000364865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/865/GCF_000364865.1_ASM36486v1/ na na na haploid bacteria 2214851 2188018 61.500000 0 15 40 NCBI RefSeq GCF_000364865.1-RS_2026_04_14 2026-04-14 1813 1732 53 na GCF_000364985.1 PRJNA224116 SAMN02441072 AQOW00000000.1 na 1266913 1266913 Thioalkalivibrio sp. HL-Eb18 strain=HL-Eb18 na latest Scaffold Major Full 2013-04-15 ASM36498v1 DOE Joint Genome Institute GCA_000364985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/364/985/GCF_000364985.1_ASM36498v1/ na na na haploid bacteria 2761862 2761122 66.000000 0 35 39 NCBI RefSeq GCF_000364985.1-RS_2024_08_13 2024-08-13 2706 2607 53 na GCF_000365005.1 PRJNA224116 SAMN02256514 AQOX00000000.1 na 1122180 278132 Limimaricola hongkongensis DSM 17492 strain=UST950701-009P na latest Scaffold Major Full 2013-04-15 ASM36500v1 DOE Joint Genome Institute GCA_000365005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/005/GCF_000365005.1_ASM36500v1/ na assembly from type material na haploid bacteria 3185912 3185812 68.500000 0 16 17 NCBI RefSeq GCF_000365005.1-RS_2026_05_16 2026-05-16 3171 3074 52 na GCF_000365025.1 PRJNA224116 SAMN02440387 AQOY00000000.1 reference genome 1123059 437507 Robiginitomaculum antarcticum DSM 21748 strain=DSM 21748 na latest Scaffold Major Full 2013-04-15 ASM36502v1 DOE Joint Genome Institute GCA_000365025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/025/GCF_000365025.1_ASM36502v1/ na assembly from type material na haploid bacteria 2769471 2768821 52.500000 0 5 6 NCBI RefSeq GCF_000365025.1-RS_2025_12_09 2025-12-09 2666 2611 43 na GCF_000365145.1 PRJNA245131 SAMN02981492 AOBU00000000.1 reference genome 1220924 293227 Cyphellophora europaea CBS 101466 strain=CBS 101466 na latest Scaffold Major Full 2013-12-11 Phia_euro_CBS_101466_V1 Broad Institute GCA_000365145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/145/GCF_000365145.1_Phia_euro_CBS_101466_V1/ na assembly from type material na haploid fungi 28781303 28719617 54.000000 0 19 106 Broad Institute Annotation submitted by Broad Institute 2024-01-04 11153 11094 58 na GCF_000365165.1 PRJNA245126 SAMN01919308 AOFF00000000.1 reference genome 1279043 86049 Cladophialophora carrionii CBS 160.54 strain=CBS 160.54 na latest Scaffold Major Full 2013-12-11 Clad_carr_CBS_160_54_V1 Broad Institute GCA_000365165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/165/GCF_000365165.1_Clad_carr_CBS_160_54_V1/ na assembly from type material na haploid fungi 28991111 28979941 54.500000 0 19 102 Broad Institute Annotation submitted by Broad Institute 2024-01-05 10428 10373 47 na GCF_000365245.1 PRJNA224116 SAMN02469649 AQOM00000000.1 na 1248414 337 Burkholderia glumae 3252-8 strain=3252-8 na latest Contig Major Full 2013-04-15 Burkholderia glumae 3252-8 Colorado State University GCA_000365245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/245/GCF_000365245.1_Burkholderia_glumae_3252-8/ na na na haploid bacteria 6115779 6115779 67.500000 0 1730 1730 NCBI RefSeq GCF_000365245.1-RS_2026_04_16 2026-04-16 6299 5805 57 24261408 GCF_000365265.1 PRJNA224116 SAMN02469644 AQOL00000000.1 na 1263856 28095 Burkholderia gladioli 3848s-5 strain=3848s-5 na latest Contig Major Full 2013-04-15 B. gladioli 3848s Colorado State University GCA_000365265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/265/GCF_000365265.1_B._gladioli_3848s/ na na na haploid bacteria 7866691 7866691 68.000000 0 1147 1147 NCBI RefSeq GCF_000365265.1-RS_2026_04_29 2026-04-29 7659 7270 55 24261408 GCF_000365285.1 PRJNA224116 SAMN02470099 AOOP00000000.1 na 1224151 1089444 Dickeya solani MK10 strain=MK10 na latest Chromosome Major Full 2013-05-07 DSOMK10_1.0 James Hutton Institute GCA_000365285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/285/GCF_000365285.1_DSOMK10_1.0/ na na na haploid bacteria 4935237 4931437 56.000000 1 3 41 NCBI RefSeq GCF_000365285.1-RS_2026_03_28 2026-03-28 4353 4153 74 23887905 GCF_000365305.1 PRJNA224116 SAMN02470095 AOOB00000000.1 na 1223568 204039 Dickeya dianthicola NCPPB 453 strain=NCPPB 453 na latest Chromosome Major Full 2013-05-07 DDI453_v1.0 James Hutton Institute GCA_000365305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/305/GCF_000365305.1_DDI453_v1.0/ na assembly from type material na haploid bacteria 4676060 4671960 56.000000 1 11 52 NCBI RefSeq GCF_000365305.1-RS_2025_12_16 2025-12-16 4238 4044 71 23887905 GCF_000365345.1 PRJNA224116 SAMN02470107 AOOQ00000000.1 na 1224152 1089444 Dickeya solani MK16 strain=MK16 na latest Chromosome Major Full 2013-05-07 DSOMK16_1.0 James Hutton Institute GCA_000365345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/345/GCF_000365345.1_DSOMK16_1.0/ na na na haploid bacteria 4870382 4868282 56.000000 1 3 24 NCBI RefSeq GCF_000365345.1-RS_2026_03_28 2026-03-28 4274 4123 74 23887905 GCF_000365365.1 PRJNA224116 SAMN02470103 AOOM00000000.1 na 1226343 204039 Dickeya dianthicola GBBC 2039 strain=GBBC 2039 na latest Chromosome Major Full 2013-05-07 DDIGBBC2039_1.0 James Hutton Institute GCA_000365365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/365/GCF_000365365.1_DDIGBBC2039_1.0/ na na na haploid bacteria 4798242 4776142 56.500000 1 32 253 NCBI RefSeq GCF_000365365.1-RS_2026_03_28 2026-03-28 4432 4192 63 23887905 GCF_000365385.1 PRJNA224116 SAMN02441407 AQPE00000000.1 na 1169158 1169158 Streptomyces sp. CNS615 strain=CNS615 na latest Scaffold Major Full 2013-04-17 ASM36538v1 DOE Joint Genome Institute GCA_000365385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/385/GCF_000365385.1_ASM36538v1/ na na na haploid bacteria 7349627 7347077 72.500000 0 69 75 NCBI RefSeq GCF_000365385.1-RS_2026_05_12 2026-05-12 6246 6036 80 na GCF_000365405.2 PRJNA224116 SAMN02470097 AOOK00000000.1 na 1223570 204039 Dickeya dianthicola NCPPB 3534 strain=NCPPB 3534 na latest Chromosome Minor Full 2013-05-07 DDI3534_1.0 James Hutton Institute GCA_000365405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/405/GCF_000365405.2_DDI3534_1.0/ na na na haploid bacteria 4867392 4863492 55.500000 1 100 139 NCBI RefSeq GCF_000365405.2-RS_2026_03_29 2026-03-29 4513 4245 111 23887905 GCF_000365425.1 PRJNA224116 SAMN02441753 AQOV00000000.1 na 1131552 1131552 Methylomonas sp. MK1 strain=MK1 na latest Contig Major Full 2013-04-12 ASM36542v1 DOE Joint Genome Institute GCA_000365425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/425/GCF_000365425.1_ASM36542v1/ na na na haploid bacteria 5233591 5233591 51.500000 0 5 5 NCBI RefSeq GCF_000365425.1-RS_2025_08_24 2025-08-24 4768 4671 59 25767239 GCF_000365565.1 PRJNA224116 SAMN00811237 AQOA00000000.1 na 1160231 29461 Brucella suis F8/06-2 strain=F8/06-2 na latest Contig Major Full 2013-04-16 Bruc_suis_F8_06-2_V1 Broad Institute GCA_000365565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/565/GCF_000365565.1_Bruc_suis_F8_06-2_V1/ na na na haploid bacteria 3297901 3297901 57.000000 0 17 17 NCBI RefSeq GCF_000365565.1-RS_2025_08_08 2025-08-08 3237 2987 62 na GCF_000365585.1 PRJNA224116 SAMN00839733 AQNZ00000000.1 na 1169237 29461 Brucella suis F5/03-2 strain=F5/03-2 na latest Contig Major Full 2013-04-16 Bruc_suis_F5_03-2_V1 Broad Institute GCA_000365585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/585/GCF_000365585.1_Bruc_suis_F5_03-2_V1/ na na na haploid bacteria 3316120 3316120 57.000000 0 9 9 NCBI RefSeq GCF_000365585.1-RS_2025_08_08 2025-08-08 3241 3007 62 na GCF_000365605.1 PRJNA224116 SAMN00811174 AQME00000000.1 na 1160192 235 Brucella abortus F2/06-8 strain=F2/06-8 na latest Contig Major Full 2013-04-16 Bruc_abor_F2_06-8_V1 Broad Institute GCA_000365605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/605/GCF_000365605.1_Bruc_abor_F2_06-8_V1/ na na na haploid bacteria 3284467 3284467 57.000000 0 4 4 NCBI RefSeq GCF_000365605.1-RS_2026_05_16 2026-05-16 3236 2988 68 na GCF_000365625.1 PRJNA224116 SAMN00811185 AQMJ00000000.1 na 1160204 235 Brucella abortus LEVI237 strain=LEVI237 na latest Contig Major Full 2013-04-16 Bruc_abor_LEVI237_V1 Broad Institute GCA_000365625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/625/GCF_000365625.1_Bruc_abor_LEVI237_V1/ na na na haploid bacteria 3262795 3262795 57.000000 0 4 4 NCBI RefSeq GCF_000365625.1-RS_2026_05_16 2026-05-16 3213 2969 68 na GCF_000365645.1 PRJNA224116 SAMN00811184 AQMI00000000.1 na 1160201 235 Brucella abortus levi gila strain=levi gila na latest Contig Major Full 2013-04-16 Bruc_abor_levi_gila_V1 Broad Institute GCA_000365645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/645/GCF_000365645.1_Bruc_abor_levi_gila_V1/ na na na haploid bacteria 3286000 3286000 57.000000 0 6 6 NCBI RefSeq GCF_000365645.1-RS_2026_05_16 2026-05-16 3235 2989 68 na GCF_000365665.1 PRJNA224116 SAMN00811186 AQMK00000000.1 na 1160163 235 Brucella abortus NI240 strain=NI240 na latest Contig Major Full 2013-04-16 Bruc_abor_NI240_V1 Broad Institute GCA_000365665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/665/GCF_000365665.1_Bruc_abor_NI240_V1/ na na na haploid bacteria 3285688 3285688 57.000000 0 7 7 NCBI RefSeq GCF_000365665.1-RS_2026_05_16 2026-05-16 3232 2985 68 na GCF_000365685.1 PRJNA224116 SAMN00811190 AQMN00000000.1 na 1160167 235 Brucella abortus NI388 strain=NI388 na latest Contig Major Full 2013-04-16 Bruc_abor_NI388_V1 Broad Institute GCA_000365685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/685/GCF_000365685.1_Bruc_abor_NI388_V1/ na na na haploid bacteria 3287413 3287413 57.000000 0 3 3 NCBI RefSeq GCF_000365685.1-RS_2026_05_14 2026-05-14 3230 2984 68 na GCF_000365705.1 PRJNA224116 SAMN01047745 AQNY00000000.1 na 1198694 29461 Brucella suis F4/06-146 strain=F4/06-146 na latest Contig Major Full 2013-04-16 Bruc_suis_F4_06-146_V1 Broad Institute GCA_000365705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/705/GCF_000365705.1_Bruc_suis_F4_06-146_V1/ na na na haploid bacteria 3317103 3317103 57.000000 0 11 11 NCBI RefSeq GCF_000365705.1-RS_2025_08_08 2025-08-08 3245 3010 62 na GCF_000365725.1 PRJNA224116 SAMN00811176 AQMG00000000.1 na 1160184 235 Brucella abortus F3/07-1 strain=F3/07-1 na latest Contig Major Full 2013-04-16 Bruc_abor_F3_07-1_V1 Broad Institute GCA_000365725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/725/GCF_000365725.1_Bruc_abor_F3_07-1_V1/ na na na haploid bacteria 3285803 3285803 57.000000 0 6 6 NCBI RefSeq GCF_000365725.1-RS_2026_05_15 2026-05-15 3237 2998 68 na GCF_000365745.1 PRJNA224116 SAMN01757984 AQMF00000000.1 na 1238668 235 Brucella abortus F3/01-300 strain=F3/01-300 na latest Contig Major Full 2013-04-16 Bruc_abor_F3_01-0300_V1 Broad Institute GCA_000365745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/745/GCF_000365745.1_Bruc_abor_F3_01-0300_V1/ na na na haploid bacteria 3286422 3286422 57.000000 0 3 3 NCBI RefSeq GCF_000365745.1-RS_2026_05_14 2026-05-14 3233 2991 68 na GCF_000365765.1 PRJNA224116 SAMN00811178 AQMH00000000.1 na 1160180 235 Brucella abortus F6/05-2 strain=F6/05-2 na latest Contig Major Full 2013-04-16 Bruc_abor_F6_05-2_V1 Broad Institute GCA_000365765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/765/GCF_000365765.1_Bruc_abor_F6_05-2_V1/ na na na haploid bacteria 3279063 3279063 57.000000 0 12 12 NCBI RefSeq GCF_000365765.1-RS_2026_05_16 2026-05-16 3231 2986 67 na GCF_000365785.1 PRJNA224116 SAMN00811173 AQMD00000000.1 na 1160191 235 Brucella abortus F1/06 B1 strain=F1/06 B1 na latest Contig Major Full 2013-04-16 Bruc_abor_F1_06-B1_V1 Broad Institute GCA_000365785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/785/GCF_000365785.1_Bruc_abor_F1_06-B1_V1/ na na na haploid bacteria 3286043 3286043 57.000000 0 6 6 NCBI RefSeq GCF_000365785.1-RS_2026_05_15 2026-05-15 3230 2990 68 na GCF_000365805.1 PRJNA224116 SAMN00811187 AQML00000000.1 na 1160164 235 Brucella abortus NI274 strain=NI274 na latest Contig Major Full 2013-04-16 Bruc_abor_NI274_V1 Broad Institute GCA_000365805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/805/GCF_000365805.1_Bruc_abor_NI274_V1/ na na na haploid bacteria 3285480 3285480 57.000000 0 7 7 NCBI RefSeq GCF_000365805.1-RS_2026_05_16 2026-05-16 3227 2983 66 na GCF_000365825.1 PRJNA224116 SAMN00811193 AQMO00000000.1 na 1160169 235 Brucella abortus NI492 strain=NI492 na latest Contig Major Full 2013-04-16 Bruc_abor_NI492_V1 Broad Institute GCA_000365825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/825/GCF_000365825.1_Bruc_abor_NI492_V1/ na na na haploid bacteria 3281037 3281037 57.000000 0 4 4 NCBI RefSeq GCF_000365825.1-RS_2026_05_16 2026-05-16 3227 2983 65 na GCF_000365845.1 PRJNA224116 SAMN01798237 AQID00000000.1 na 1244532 29459 Brucella melitensis F15/06-7 strain=F15/06-7 na latest Contig Major Full 2013-04-16 Bruc_meli_F15_06-7_V1 Broad Institute GCA_000365845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/845/GCF_000365845.1_Bruc_meli_F15_06-7_V1/ na na na haploid bacteria 3300543 3300543 57.000000 0 12 12 NCBI RefSeq GCF_000365845.1-RS_2026_04_25 2026-04-25 3247 2997 63 na GCF_000365865.1 PRJNA224116 SAMN01798236 AQIC00000000.1 na 1247411 29459 Brucella melitensis B115 strain=B115 na latest Contig Major Full 2013-04-16 Bruc_meli_B115_V1 Broad Institute GCA_000365865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/865/GCF_000365865.1_Bruc_meli_B115_V1/ na na na haploid bacteria 3291764 3291764 57.000000 0 5 5 NCBI RefSeq GCF_000365865.1-RS_2026_04_26 2026-04-26 3234 2981 62 na GCF_000365885.1 PRJNA224116 SAMN01921155 AQII00000000.1 na 1293922 236 Brucella ovis IntaBari-2006-46-332 strain=IntaBari-2006-46-332 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2006-46-332_V1 Broad Institute GCA_000365885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/885/GCF_000365885.1_Bruc_ovis_IntaBari-2006-46-332_V1/ na na na haploid bacteria 3289392 3289392 57.000000 0 30 30 NCBI RefSeq GCF_000365885.1-RS_2026_05_13 2026-05-13 3249 2834 71 na GCF_000365905.1 PRJNA224116 SAMN01921148 AQIJ00000000.1 na 1293915 236 Brucella ovis IntaBari-2010-47-871 strain=IntaBari-2010-47-871 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2010-47-871_V1 Broad Institute GCA_000365905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/905/GCF_000365905.1_Bruc_ovis_IntaBari-2010-47-871_V1/ na na na haploid bacteria 3290844 3290844 57.000000 0 22 22 NCBI RefSeq GCF_000365905.1-RS_2026_05_13 2026-05-13 3243 2837 77 na GCF_000365925.1 PRJNA224116 SAMN01921149 AQIK00000000.1 na 1293916 236 Brucella ovis IntaBari-2002-82-58 strain=IntaBari-2002-82-58 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2002-82-58_V1 Broad Institute GCA_000365925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/925/GCF_000365925.1_Bruc_ovis_IntaBari-2002-82-58_V1/ na na na haploid bacteria 3290866 3290866 57.000000 0 23 23 NCBI RefSeq GCF_000365925.1-RS_2026_05_13 2026-05-13 3244 2835 77 na GCF_000365945.1 PRJNA224116 SAMN01921150 AQIL00000000.1 na 1293917 236 Brucella ovis IntaBari-2001-319-5096 strain=IntaBari-2001-319-5096 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2001-319-5096_V1 Broad Institute GCA_000365945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/945/GCF_000365945.1_Bruc_ovis_IntaBari-2001-319-5096_V1/ na na na haploid bacteria 3276805 3276805 57.000000 0 36 36 NCBI RefSeq GCF_000365945.1-RS_2026_05_13 2026-05-13 3249 2831 66 na GCF_000365965.1 PRJNA224116 SAMN01921151 AQIM00000000.1 na 1293918 236 Brucella ovis IntaBari-2001-319-4082 strain=IntaBari-2001-319-4082 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2001-319-4082_V1 Broad Institute GCA_000365965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/965/GCF_000365965.1_Bruc_ovis_IntaBari-2001-319-4082_V1/ na na na haploid bacteria 3291724 3291724 57.000000 0 21 21 NCBI RefSeq GCF_000365965.1-RS_2026_05_13 2026-05-13 3248 2844 71 na GCF_000365985.1 PRJNA224116 SAMN01921152 AQIN00000000.1 na 1293919 236 Brucella ovis IntaBari-2008-114-542 strain=IntaBari-2008-114-542 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2008-114-542_V1 Broad Institute GCA_000365985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/365/985/GCF_000365985.1_Bruc_ovis_IntaBari-2008-114-542_V1/ na na na haploid bacteria 3290674 3290674 57.000000 0 22 22 NCBI RefSeq GCF_000365985.1-RS_2026_05_13 2026-05-13 3239 2831 77 na GCF_000366005.1 PRJNA224116 SAMN01921153 AQIO00000000.1 na 1293920 236 Brucella ovis IntaBari-1993-758 strain=IntaBari-1993-758 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-1993-758_V1 Broad Institute GCA_000366005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/005/GCF_000366005.1_Bruc_ovis_IntaBari-1993-758_V1/ na na na haploid bacteria 3310455 3310455 57.000000 0 24 24 NCBI RefSeq GCF_000366005.1-RS_2026_05_13 2026-05-13 3260 2852 77 na GCF_000366025.1 PRJNA224116 SAMN01047752 AQIE00000000.1 na 1198700 235 Brucella abortus RB51-AHVLA strain=RB51-AHVLA na latest Contig Major Full 2013-04-16 Bruc_abor_RB51_V1 Broad Institute GCA_000366025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/025/GCF_000366025.1_Bruc_abor_RB51_V1/ na na na haploid bacteria 3286693 3286693 57.000000 0 2 2 NCBI RefSeq GCF_000366025.1-RS_2026_05_15 2026-05-15 3227 2980 68 na GCF_000366045.1 PRJNA224116 SAMN01921146 AQIF00000000.1 na 1293913 236 Brucella ovis IntaBari-2009-88-4 strain=IntaBari-2009-88-4 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2009-88-4_V1 Broad Institute GCA_000366045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/045/GCF_000366045.1_Bruc_ovis_IntaBari-2009-88-4_V1/ na na na haploid bacteria 3291315 3291315 57.000000 0 21 21 NCBI RefSeq GCF_000366045.1-RS_2026_05_13 2026-05-13 3242 2833 77 na GCF_000366065.1 PRJNA224116 SAMN01921154 AQIG00000000.1 na 1293921 236 Brucella ovis IntaBari-2006-46-348 strain=IntaBari-2006-46-348 na latest Contig Major Full 2013-04-16 Bruc_ovis_IntaBari-2006-46-348_V1 Broad Institute GCA_000366065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/065/GCF_000366065.1_Bruc_ovis_IntaBari-2006-46-348_V1/ na na na haploid bacteria 3289504 3289504 57.000000 0 38 38 NCBI RefSeq GCF_000366065.1-RS_2026_05_13 2026-05-13 3259 2830 78 na GCF_000366085.1 PRJNA224116 SAMN00811231 AQNT00000000.1 na 1160232 29461 Brucella suis 63/252 strain=63/252 na latest Contig Major Full 2013-04-16 Bruc_suis_63_252_V1 Broad Institute GCA_000366085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/085/GCF_000366085.1_Bruc_suis_63_252_V1/ na na na haploid bacteria 3308242 3308242 57.000000 0 8 8 NCBI RefSeq GCF_000366085.1-RS_2025_08_08 2025-08-08 3222 3020 68 na GCF_000366105.1 PRJNA224116 SAMN00811225 AQLL00000000.1 na 1160209 235 Brucella abortus 65/110 strain=65/110 na latest Contig Major Full 2013-04-16 Bruc_abor_65_110_V1 Broad Institute GCA_000366105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/105/GCF_000366105.1_Bruc_abor_65_110_V1/ na na na haploid bacteria 3281592 3281592 57.000000 0 11 11 NCBI RefSeq GCF_000366105.1-RS_2026_05_15 2026-05-15 3227 2986 68 na GCF_000366125.1 PRJNA224116 SAMN01047740 AQMA00000000.1 na 1198689 235 Brucella abortus CNGB 752 strain=CNGB 752 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_752_V1 Broad Institute GCA_000366125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/125/GCF_000366125.1_Bruc_abor_CNGB_752_V1/ na na na haploid bacteria 3284909 3284909 57.000000 0 3 3 NCBI RefSeq GCF_000366125.1-RS_2026_05_15 2026-05-15 3234 2986 68 na GCF_000366145.1 PRJNA224116 SAMN01047741 AQMB00000000.1 na 1198690 235 Brucella abortus CNGB 759 strain=CNGB 759 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_759_V1 Broad Institute GCA_000366145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/145/GCF_000366145.1_Bruc_abor_CNGB_759_V1/ na na na haploid bacteria 3285661 3285661 57.000000 0 3 3 NCBI RefSeq GCF_000366145.1-RS_2026_05_14 2026-05-14 3229 2983 68 na GCF_000366165.1 PRJNA224116 SAMN01047742 AQMC00000000.1 na 1198691 235 Brucella abortus CNGB 966 strain=CNGB 966 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_966_V1 Broad Institute GCA_000366165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/165/GCF_000366165.1_Bruc_abor_CNGB_966_V1/ na na na haploid bacteria 3285875 3285875 57.000000 0 2 2 NCBI RefSeq GCF_000366165.1-RS_2026_05_15 2026-05-15 3233 2986 68 na GCF_000366185.1 PRJNA224116 SAMN00811189 AQMM00000000.1 na 1160166 235 Brucella abortus NI380 strain=NI380 na latest Contig Major Full 2013-04-16 Bruc_abor_NI380_V1 Broad Institute GCA_000366185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/185/GCF_000366185.1_Bruc_abor_NI380_V1/ na na na haploid bacteria 3286460 3286460 57.000000 0 2 2 NCBI RefSeq GCF_000366185.1-RS_2026_05_15 2026-05-15 3230 2983 68 na GCF_000366205.1 PRJNA224116 SAMN00811233 AQNU00000000.1 na 1160233 29461 Brucella suis 92/29 strain=92/29 na latest Contig Major Full 2013-04-16 Bruc_suis_92_29_V1 Broad Institute GCA_000366205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/205/GCF_000366205.1_Bruc_suis_92_29_V1/ na na na haploid bacteria 3308809 3308809 57.500000 0 10 10 NCBI RefSeq GCF_000366205.1-RS_2025_08_08 2025-08-08 3228 3026 68 na GCF_000366225.1 PRJNA224116 SAMN00811234 AQNV00000000.1 na 1160230 29461 Brucella suis 92/63 strain=92/63 na latest Contig Major Full 2013-04-16 Bruc_suis_92_63_V1 Broad Institute GCA_000366225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/225/GCF_000366225.1_Bruc_suis_92_63_V1/ na na na haploid bacteria 3324925 3324925 57.000000 0 2 2 NCBI RefSeq GCF_000366225.1-RS_2025_08_08 2025-08-08 3250 3006 67 na GCF_000366245.1 PRJNA224116 SAMN01047746 AQNW00000000.1 na 1198695 29461 Brucella suis 94/11 strain=94/11 na latest Contig Major Full 2013-04-16 Bruc_suis_94_11_V1 Broad Institute GCA_000366245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/245/GCF_000366245.1_Bruc_suis_94_11_V1/ na na na haploid bacteria 3319332 3319332 57.000000 0 11 11 NCBI RefSeq GCF_000366245.1-RS_2025_08_08 2025-08-08 3240 3006 62 na GCF_000366265.1 PRJNA224116 SAMN01047733 AQNX00000000.1 na 1198682 29461 Brucella suis CNGB 786 strain=CNGB 786 na latest Contig Major Full 2013-04-16 Bruc_suis_CNGB_786_V1 Broad Institute GCA_000366265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/265/GCF_000366265.1_Bruc_suis_CNGB_786_V1/ na na na haploid bacteria 3307773 3307773 57.500000 0 8 8 NCBI RefSeq GCF_000366265.1-RS_2025_08_08 2025-08-08 3225 3020 67 na GCF_000366285.1 PRJNA224116 SAMN00811214 AQLK00000000.1 na 1160205 235 Brucella abortus 64/122 strain=64/122 na latest Contig Major Full 2013-04-16 Bruc_abor_64_122_V1 Broad Institute GCA_000366285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/285/GCF_000366285.1_Bruc_abor_64_122_V1/ na na na haploid bacteria 3278557 3278557 57.000000 0 4 4 NCBI RefSeq GCF_000366285.1-RS_2026_05_15 2026-05-15 3221 2990 68 na GCF_000366305.1 PRJNA224116 SAMN00811238 AQLM00000000.1 na 1160182 235 Brucella abortus 67/781 strain=67/781 na latest Contig Major Full 2013-04-16 Bruc_abor_67_781_V1 Broad Institute GCA_000366305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/305/GCF_000366305.1_Bruc_abor_67_781_V1/ na na na haploid bacteria 3286195 3286195 57.000000 0 4 4 NCBI RefSeq GCF_000366305.1-RS_2026_05_16 2026-05-16 3228 2980 68 na GCF_000366325.1 PRJNA224116 SAMN00811160 AQLN00000000.1 na 1160189 235 Brucella abortus 78/36 strain=78/36 na latest Contig Major Full 2013-04-16 Bruc_abor_78_36_V1 Broad Institute GCA_000366325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/325/GCF_000366325.1_Bruc_abor_78_36_V1/ na na na haploid bacteria 3278535 3278535 57.000000 0 6 6 NCBI RefSeq GCF_000366325.1-RS_2026_05_15 2026-05-15 3216 2974 67 na GCF_000366345.1 PRJNA224116 SAMN00811162 AQLO00000000.1 na 1160203 235 Brucella abortus 80/102 strain=80/102 na latest Contig Major Full 2013-04-16 Bruc_abor_80_102_V1 Broad Institute GCA_000366345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/345/GCF_000366345.1_Bruc_abor_80_102_V1/ na na na haploid bacteria 3278510 3278510 57.000000 0 5 5 NCBI RefSeq GCF_000366345.1-RS_2026_05_15 2026-05-15 3230 2987 68 na GCF_000366365.1 PRJNA224116 SAMN00811163 AQLP00000000.1 na 1160198 235 Brucella abortus 80/108 strain=80/108 na latest Contig Major Full 2013-04-16 Bruc_abor_80_108_V1 Broad Institute GCA_000366365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/365/GCF_000366365.1_Bruc_abor_80_108_V1/ na na na haploid bacteria 3295972 3295972 57.000000 0 3 3 NCBI RefSeq GCF_000366365.1-RS_2026_05_14 2026-05-14 3231 2985 68 na GCF_000366385.1 PRJNA224116 SAMN00811164 AQLQ00000000.1 na 1160187 235 Brucella abortus 85/140 strain=85/140 na latest Contig Major Full 2013-04-16 Bruc_abor_85_140_V1 Broad Institute GCA_000366385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/385/GCF_000366385.1_Bruc_abor_85_140_V1/ na na na haploid bacteria 3281183 3281183 57.000000 0 7 7 NCBI RefSeq GCF_000366385.1-RS_2026_05_15 2026-05-15 3226 2986 68 na GCF_000366405.1 PRJNA224116 SAMN00811166 AQLR00000000.1 na 1160193 235 Brucella abortus 863/67 strain=863/67 na latest Contig Major Full 2013-04-16 Bruc_abor_863_67_V1 Broad Institute GCA_000366405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/405/GCF_000366405.1_Bruc_abor_863_67_V1/ na na na haploid bacteria 3284164 3284164 57.000000 0 6 6 NCBI RefSeq GCF_000366405.1-RS_2026_05_15 2026-05-15 3235 2993 68 na GCF_000366425.1 PRJNA224116 SAMN00811168 AQLS00000000.1 na 1160178 235 Brucella abortus 88/19 strain=88/19 na latest Contig Major Full 2013-04-16 Bruc_abor_88_19_V1 Broad Institute GCA_000366425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/425/GCF_000366425.1_Bruc_abor_88_19_V1/ na na na haploid bacteria 3284328 3284328 57.000000 0 4 4 NCBI RefSeq GCF_000366425.1-RS_2026_05_15 2026-05-15 3232 2989 67 na GCF_000366445.1 PRJNA224116 SAMN00811169 AQLT00000000.1 na 1160194 235 Brucella abortus 88/226 strain=88/226 na latest Contig Major Full 2013-04-16 Bruc_abor_88_226_V1 Broad Institute GCA_000366445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/445/GCF_000366445.1_Bruc_abor_88_226_V1/ na na na haploid bacteria 3286132 3286132 57.000000 0 3 3 NCBI RefSeq GCF_000366445.1-RS_2026_05_14 2026-05-14 3238 2994 68 na GCF_000366465.1 PRJNA224116 SAMN00811171 AQLU00000000.1 na 1160196 235 Brucella abortus 90/50 strain=90/50 na latest Contig Major Full 2013-04-16 Bruc_abor_90_50_V1 Broad Institute GCA_000366465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/465/GCF_000366465.1_Bruc_abor_90_50_V1/ na na na haploid bacteria 3286330 3286330 57.000000 0 4 4 NCBI RefSeq GCF_000366465.1-RS_2026_05_16 2026-05-16 3232 2985 68 na GCF_000366485.1 PRJNA224116 SAMN00811172 AQLV00000000.1 na 1160197 235 Brucella abortus 93/1 strain=93/1 na latest Contig Major Full 2013-04-16 Bruc_abor_93_1_V1 Broad Institute GCA_000366485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/485/GCF_000366485.1_Bruc_abor_93_1_V1/ na na na haploid bacteria 3285426 3285426 57.000000 0 4 4 NCBI RefSeq GCF_000366485.1-RS_2026_05_16 2026-05-16 3235 2990 68 na GCF_000366505.1 PRJNA224116 SAMN01047743 AQLW00000000.1 na 1198692 235 Brucella abortus CNGB 1011 strain=CNGB 1011 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_1011_V1 Broad Institute GCA_000366505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/505/GCF_000366505.1_Bruc_abor_CNGB_1011_V1/ na na na haploid bacteria 3286002 3286002 57.000000 0 2 2 NCBI RefSeq GCF_000366505.1-RS_2026_05_15 2026-05-15 3228 2979 68 na GCF_000366525.1 PRJNA224116 SAMN01047744 AQLX00000000.1 na 1198693 235 Brucella abortus CNGB 1432 strain=CNGB 1432 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_1432_V1 Broad Institute GCA_000366525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/525/GCF_000366525.1_Bruc_abor_CNGB_1432_V1/ na na na haploid bacteria 3283758 3283758 57.000000 0 4 4 NCBI RefSeq GCF_000366525.1-RS_2026_05_16 2026-05-16 3230 2982 68 na GCF_000366545.1 PRJNA224116 SAMN01047739 AQLY00000000.1 na 1198688 235 Brucella abortus CNGB 308 strain=CNGB 308 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_308_V1 Broad Institute GCA_000366545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/545/GCF_000366545.1_Bruc_abor_CNGB_308_V1/ na na na haploid bacteria 3284291 3284291 57.000000 0 4 4 NCBI RefSeq GCF_000366545.1-RS_2026_05_16 2026-05-16 3232 2983 68 na GCF_000366565.1 PRJNA224116 SAMN01047738 AQLZ00000000.1 na 1198687 235 Brucella abortus CNGB 436 strain=CNGB 436 na latest Contig Major Full 2013-04-16 Bruc_abor_CNGB_436_V1 Broad Institute GCA_000366565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/565/GCF_000366565.1_Bruc_abor_CNGB_436_V1/ na na na haploid bacteria 3285441 3285441 57.000000 0 3 3 NCBI RefSeq GCF_000366565.1-RS_2026_05_15 2026-05-15 3231 2982 68 na GCF_000366585.1 PRJNA224116 SAMN00811219 AQNO00000000.1 na 1160221 29459 Brucella melitensis UK22/06 strain=UK22/06 na latest Contig Major Full 2013-04-16 Bruc_meli_UK22_06_V1 Broad Institute GCA_000366585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/585/GCF_000366585.1_Bruc_meli_UK22_06_V1/ na na na haploid bacteria 3232427 3232427 57.500000 0 12 12 NCBI RefSeq GCF_000366585.1-RS_2026_04_18 2026-04-18 3181 2955 62 na GCF_000366605.1 PRJNA224116 SAMN00811192 AQLJ00000000.1 na 1160183 235 Brucella abortus 63/59 strain=63/59 na latest Contig Major Full 2013-04-16 Bruc_abor_63_59_V1 Broad Institute GCA_000366605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/605/GCF_000366605.1_Bruc_abor_63_59_V1/ na na na haploid bacteria 3286377 3286377 57.000000 0 5 5 NCBI RefSeq GCF_000366605.1-RS_2026_05_16 2026-05-16 3230 2985 68 na GCF_000366625.1 PRJNA224116 SAMN01047730 AQNE00000000.1 na 1198679 29459 Brucella melitensis CNGB 1076 strain=CNGB 1076 na latest Contig Major Full 2013-04-16 Bruc_meli_CNGB_1076_V1 Broad Institute GCA_000366625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/625/GCF_000366625.1_Bruc_meli_CNGB_1076_V1/ na na na haploid bacteria 3291820 3291820 57.000000 0 6 6 NCBI RefSeq GCF_000366625.1-RS_2026_05_30 2026-05-30 3232 2985 62 na GCF_000366645.1 PRJNA224116 SAMN00811195 AQMP00000000.1 na 1160161 235 Brucella abortus NI518 strain=NI518 na latest Contig Major Full 2013-04-16 Bruc_abor_NI518_V1 Broad Institute GCA_000366645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/645/GCF_000366645.1_Bruc_abor_NI518_V1/ na na na haploid bacteria 3286494 3286494 57.000000 0 2 2 NCBI RefSeq GCF_000366645.1-RS_2026_05_15 2026-05-15 3228 2982 68 na GCF_000366665.1 PRJNA224116 SAMN00811199 AQMT00000000.1 na 1160160 235 Brucella abortus NI628 strain=NI628 na latest Contig Major Full 2013-04-16 Bruc_abor_NI628_V1 Broad Institute GCA_000366665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/665/GCF_000366665.1_Bruc_abor_NI628_V1/ na na na haploid bacteria 3286455 3286455 57.000000 0 6 6 NCBI RefSeq GCF_000366665.1-RS_2026_05_16 2026-05-16 3230 2984 68 na GCF_000366685.1 PRJNA224116 SAMN00811196 AQMQ00000000.1 na 1160171 235 Brucella abortus NI593 strain=NI593 na latest Contig Major Full 2013-04-16 Bruc_abor_NI593_V1 Broad Institute GCA_000366685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/685/GCF_000366685.1_Bruc_abor_NI593_V1/ na na na haploid bacteria 3285845 3285845 57.000000 0 3 3 NCBI RefSeq GCF_000366685.1-RS_2026_05_15 2026-05-15 3229 2983 68 na GCF_000366705.1 PRJNA224116 SAMN00811201 AQMV00000000.1 na 1160175 235 Brucella abortus NI639 strain=NI639 na latest Contig Major Full 2013-04-16 Bruc_abor_NI639_V1 Broad Institute GCA_000366705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/705/GCF_000366705.1_Bruc_abor_NI639_V1/ na na na haploid bacteria 3286209 3286209 57.000000 0 4 4 NCBI RefSeq GCF_000366705.1-RS_2026_05_16 2026-05-16 3230 2984 68 na GCF_000366725.1 PRJNA224116 SAMN00811198 AQMS00000000.1 na 1160173 235 Brucella abortus NI622 strain=NI622 na latest Contig Major Full 2013-04-16 Bruc_abor_NI622_V1 Broad Institute GCA_000366725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/725/GCF_000366725.1_Bruc_abor_NI622_V1/ na na na haploid bacteria 3286410 3286410 57.000000 0 2 2 NCBI RefSeq GCF_000366725.1-RS_2026_05_15 2026-05-15 3230 2983 68 na GCF_000366745.1 PRJNA224116 SAMN00811197 AQMR00000000.1 na 1160172 235 Brucella abortus NI613 strain=NI613 na latest Contig Major Full 2013-04-16 Bruc_abor_NI613_V1 Broad Institute GCA_000366745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/745/GCF_000366745.1_Bruc_abor_NI613_V1/ na na na haploid bacteria 3285926 3285926 57.000000 0 6 6 NCBI RefSeq GCF_000366745.1-RS_2026_05_16 2026-05-16 3231 2983 68 na GCF_000366765.1 PRJNA224116 SAMN00811200 AQMU00000000.1 na 1160174 235 Brucella abortus NI633 strain=NI633 na latest Contig Major Full 2013-04-16 Bruc_abor_NI633_V1 Broad Institute GCA_000366765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/765/GCF_000366765.1_Bruc_abor_NI633_V1/ na na na haploid bacteria 3286129 3286129 57.000000 0 4 4 NCBI RefSeq GCF_000366765.1-RS_2026_05_16 2026-05-16 3231 2984 68 na GCF_000366785.1 PRJNA224116 SAMN00811202 AQMW00000000.1 na 1160176 235 Brucella abortus NI645 strain=NI645 na latest Contig Major Full 2013-04-16 Bruc_abor_NI645_V1 Broad Institute GCA_000366785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/785/GCF_000366785.1_Bruc_abor_NI645_V1/ na na na haploid bacteria 3285848 3285848 57.000000 0 4 4 NCBI RefSeq GCF_000366785.1-RS_2026_05_16 2026-05-16 3232 2984 68 na GCF_000366805.1 PRJNA224116 SAMN00811204 AQMX00000000.1 na 1160162 235 Brucella abortus NI649 strain=NI649 na latest Contig Major Full 2013-04-16 Bruc_abor_NI649_V1 Broad Institute GCA_000366805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/805/GCF_000366805.1_Bruc_abor_NI649_V1/ na na na haploid bacteria 3286031 3286031 57.000000 0 6 6 NCBI RefSeq GCF_000366805.1-RS_2026_05_16 2026-05-16 3231 2985 68 na GCF_000366825.1 PRJNA224116 SAMN01047747 AQNB00000000.1 na 1198696 36855 Brucella canis UK10/02 strain=UK10/02 na latest Contig Major Full 2013-04-16 Bruc_cani_UK10_02_V1 Broad Institute GCA_000366825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/825/GCF_000366825.1_Bruc_cani_UK10_02_V1/ na na na haploid bacteria 3307765 3307765 57.500000 0 2 2 NCBI RefSeq GCF_000366825.1-RS_2025_08_08 2025-08-08 3216 3006 68 na GCF_000366845.1 PRJNA224116 SAMN00811206 AQNC00000000.1 na 1160220 29459 Brucella melitensis 64/150 strain=64/150 na latest Contig Major Full 2013-04-16 Bruc_meli_64_150_V1 Broad Institute GCA_000366845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/845/GCF_000366845.1_Bruc_meli_64_150_V1/ na na na haploid bacteria 3297832 3297832 57.000000 0 16 16 NCBI RefSeq GCF_000366845.1-RS_2026_04_18 2026-04-18 3242 3014 63 na GCF_000366865.1 PRJNA224116 SAMN00811207 AQND00000000.1 na 1160224 29459 Brucella melitensis 66/59 strain=66/59 na latest Contig Major Full 2013-04-16 Bruc_meli_66_59_V1 Broad Institute GCA_000366865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/865/GCF_000366865.1_Bruc_meli_66_59_V1/ na na na haploid bacteria 3297701 3297701 57.000000 0 12 12 NCBI RefSeq GCF_000366865.1-RS_2026_04_18 2026-04-18 3238 3010 63 na GCF_000366885.1 PRJNA224116 SAMN01047731 AQNF00000000.1 na 1198680 29459 Brucella melitensis CNGB 1120 strain=CNGB 1120 na latest Contig Major Full 2013-04-16 Bruc_meli_CNGB_1120_V1 Broad Institute GCA_000366885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/885/GCF_000366885.1_Bruc_meli_CNGB_1120_V1/ na na na haploid bacteria 3292448 3292448 57.000000 0 4 4 NCBI RefSeq GCF_000366885.1-RS_2026_04_26 2026-04-26 3232 2981 62 na GCF_000366905.1 PRJNA224116 SAMN01047732 AQNG00000000.1 na 1198681 29459 Brucella melitensis CNGB 290 strain=CNGB 290 na latest Contig Major Full 2013-04-16 Bruc_meli_CNGB_290_V1 Broad Institute GCA_000366905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/905/GCF_000366905.1_Bruc_meli_CNGB_290_V1/ na na na haploid bacteria 3290983 3290983 57.000000 0 9 9 NCBI RefSeq GCF_000366905.1-RS_2026_05_31 2026-05-31 3232 2983 61 na GCF_000366925.1 PRJNA224116 SAMN00811209 AQNH00000000.1 na 1160211 29459 Brucella melitensis F10/05-2 strain=F10/05-2 na latest Contig Major Full 2013-04-16 Bruc_meli_F10_05-2_V1 Broad Institute GCA_000366925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/925/GCF_000366925.1_Bruc_meli_F10_05-2_V1/ na na na haploid bacteria 3319669 3319669 57.000000 0 28 28 NCBI RefSeq GCF_000366925.1-RS_2026_04_26 2026-04-26 3263 2998 68 na GCF_000366945.1 PRJNA224116 SAMN00811210 AQNI00000000.1 na 1160226 29459 Brucella melitensis F2/06-6 strain=F2/06-6 na latest Contig Major Full 2013-04-16 Bruc_meli_F2_06-6_V1 Broad Institute GCA_000366945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/945/GCF_000366945.1_Bruc_meli_F2_06-6_V1/ na na na haploid bacteria 3297610 3297610 57.000000 0 15 15 NCBI RefSeq GCF_000366945.1-RS_2026_04_21 2026-04-21 3242 3008 63 na GCF_000366965.1 PRJNA224116 SAMN00811211 AQNJ00000000.1 na 1160210 29459 Brucella melitensis F3/02 strain=F3/02 na latest Contig Major Full 2013-04-16 Bruc_meli_F3_02_V1 Broad Institute GCA_000366965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/965/GCF_000366965.1_Bruc_meli_F3_02_V1/ na na na haploid bacteria 3290007 3290007 57.000000 0 12 12 NCBI RefSeq GCF_000366965.1-RS_2026_04_25 2026-04-25 3234 2985 62 na GCF_000366985.1 PRJNA224116 SAMN00811212 AQNK00000000.1 na 1160215 29459 Brucella melitensis F5/07-239A strain=F5/07-239A na latest Contig Major Full 2013-04-16 Bruc_meli_F5_07-239A_V1 Broad Institute GCA_000366985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/366/985/GCF_000366985.1_Bruc_meli_F5_07-239A_V1/ na na na haploid bacteria 3300614 3300614 57.000000 0 9 9 NCBI RefSeq GCF_000366985.1-RS_2026_05_31 2026-05-31 3236 2986 62 na GCF_000367005.1 PRJNA224116 SAMN00839731 AQNL00000000.1 na 1169225 29459 Brucella melitensis F6/05-6 strain=F6/05-6 na latest Contig Major Full 2013-04-16 Bruc_meli_F6_05-6_V1 Broad Institute GCA_000367005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/005/GCF_000367005.1_Bruc_meli_F6_05-6_V1/ na na na haploid bacteria 3298746 3298746 57.000000 0 10 10 NCBI RefSeq GCF_000367005.1-RS_2026_04_19 2026-04-19 3238 3009 63 na GCF_000367025.1 PRJNA224116 SAMN00811215 AQNM00000000.1 na 1160218 29459 Brucella melitensis R3/07-2 strain=R3/07-2 na latest Contig Major Full 2013-04-16 Bruc_meli_R3_07-2_V1 Broad Institute GCA_000367025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/025/GCF_000367025.1_Bruc_meli_R3_07-2_V1/ na na na haploid bacteria 3300654 3300654 57.000000 0 10 10 NCBI RefSeq GCF_000367025.1-RS_2026_04_26 2026-04-26 3246 2991 63 na GCF_000367045.1 PRJNA224116 SAMN00811217 AQNN00000000.1 na 1160223 29459 Brucella melitensis UK19/04 strain=UK19/04 na latest Contig Major Full 2013-04-16 Bruc_meli_UK19_04_V1 Broad Institute GCA_000367045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/045/GCF_000367045.1_Bruc_meli_UK19_04_V1/ na na na haploid bacteria 3296038 3296038 57.000000 0 7 7 NCBI RefSeq GCF_000367045.1-RS_2026_04_25 2026-04-25 3240 2994 63 na GCF_000367065.1 PRJNA224116 SAMN00839737 AQNP00000000.1 na 1169231 236 Brucella ovis 80/125 strain=80/125 na latest Contig Major Full 2013-04-16 Bruc_ovis_80_125_V1 Broad Institute GCA_000367065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/065/GCF_000367065.1_Bruc_ovis_80_125_V1/ na na na haploid bacteria 3303334 3303334 57.000000 0 23 23 NCBI RefSeq GCF_000367065.1-RS_2026_05_13 2026-05-13 3257 2846 84 na GCF_000367085.1 PRJNA224116 SAMN01047729 AQNQ00000000.1 na 1198678 236 Brucella ovis F8/05B strain=F8/05B na latest Contig Major Full 2013-04-16 Bruc_ovis_F8_05B_V1 Broad Institute GCA_000367085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/085/GCF_000367085.1_Bruc_ovis_F8_05B_V1/ na na na haploid bacteria 3267028 3267028 57.000000 0 35 35 NCBI RefSeq GCF_000367085.1-RS_2026_05_13 2026-05-13 3256 2837 66 na GCF_000367105.1 PRJNA224116 SAMN00811229 AQNS00000000.1 na 437685 437685 Brucella sp. UK5/01 strain=UK5/01 na latest Contig Major Full 2013-04-16 Bruc_sp_UK5_01_V1 Broad Institute GCA_000367105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/105/GCF_000367105.1_Bruc_sp_UK5_01_V1/ na na na haploid bacteria 3373727 3373727 57.000000 0 34 34 NCBI RefSeq GCF_000367105.1-RS_2024_06_06 2024-06-06 3301 3082 68 na GCF_000367125.1 PRJNA224116 SAMN00811227 AQNR00000000.1 na 1160234 1160234 Brucella sp. UK38/05 strain=UK38/05 na latest Contig Major Full 2013-04-16 Bruc_sp_UK38_05_V1 Broad Institute GCA_000367125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/125/GCF_000367125.1_Bruc_sp_UK38_05_V1/ na na na haploid bacteria 3314900 3314900 57.000000 0 49 49 NCBI RefSeq GCF_000367125.1-RS_2024_06_06 2024-06-06 3246 2984 68 na GCF_000367185.1 PRJNA224116 SAMN02470252 AFCG00000000.1 na 1004152 2128 Mesomycoplasma flocculare ATCC 27716 strain=ATCC 27716 na latest Contig Major Full 2013-04-17 Mycoplasma flocculare genome LNCC GCA_000367185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/185/GCF_000367185.1_Mycoplasma_flocculare_genome/ na na na haploid bacteria 763948 763948 29.000000 0 14 14 NCBI RefSeq GCF_000367185.1-RS_2026_02_26 2026-02-26 631 579 35 na GCF_000367205.1 PRJNA224116 SAMN02603001 na reference genome 1170318 33010 Cutibacterium avidum 44067 strain=44067 na latest Complete Genome Major Full 2013-04-17 ASM36720v1 BAYGEN GCA_000367205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/205/GCF_000367205.1_ASM36720v1/ na na na haploid bacteria 2526138 2526138 63.500000 1 1 1 NCBI RefSeq GCF_000367205.1-RS_2026_04_26 2026-04-26 2346 2217 58 23792747 GCF_000367225.1 PRJNA224116 SAMEA4532338 na na 1091495 84590 Taylorella asinigenitalis 14/45 strain=14/45 na latest Scaffold Major Full 2012-07-31 ASM36722v1 University of Bristol GCA_000367225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/225/GCF_000367225.1_ASM36722v1/ na na na haploid bacteria 1540266 1540256 38.500000 0 1 2 NCBI RefSeq GCF_000367225.1-RS_2026_04_03 2026-04-03 1491 1415 38 na GCF_000367245.1 PRJNA224116 SAMEA4532337 na na 1091497 29575 Taylorella equigenitalis 14/56 strain=14/56 na latest Scaffold Major Full 2012-07-31 ASM36724v1 University of Bristol GCA_000367245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/245/GCF_000367245.1_ASM36724v1/ na na na haploid bacteria 1652885 1652845 37.500000 0 1 5 NCBI RefSeq GCF_000367245.1-RS_2026_03_21 2026-03-21 1588 1490 43 na GCF_000367265.1 PRJNA224116 SAMN01047737 AQMY00000000.1 na 1198686 36855 Brucella canis CNGB 1172 strain=CNGB 1172 na latest Contig Major Full 2013-04-17 Bruc_cani_CNGB_1172_V1 Broad Institute GCA_000367265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/265/GCF_000367265.1_Bruc_cani_CNGB_1172_V1/ na na na haploid bacteria 3228338 3228338 57.000000 0 2 2 NCBI RefSeq GCF_000367265.1-RS_2025_08_08 2025-08-08 3136 2934 64 na GCF_000367285.1 PRJNA224116 SAMN01047735 AQMZ00000000.1 na 1198684 36855 Brucella canis CNGB 1324 strain=CNGB 1324 na latest Contig Major Full 2013-04-17 Bruc_cani_CNGB_1324_V1 Broad Institute GCA_000367285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/285/GCF_000367285.1_Bruc_cani_CNGB_1324_V1/ na na na haploid bacteria 3313757 3313757 57.000000 0 2 2 NCBI RefSeq GCF_000367285.1-RS_2025_08_08 2025-08-08 3222 3013 68 na GCF_000367305.1 PRJNA224116 SAMN01047750 AQNA00000000.1 na 1198699 36855 Brucella canis F7/05A strain=F7/05A na latest Contig Major Full 2013-04-17 Bruc_cani_F7_05A_V1 Broad Institute GCA_000367305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/305/GCF_000367305.1_Bruc_cani_F7_05A_V1/ na na na haploid bacteria 3217065 3217065 57.000000 0 3 3 NCBI RefSeq GCF_000367305.1-RS_2025_08_08 2025-08-08 3140 2931 68 na GCF_000367325.1 PRJNA224116 SAMD00041814 BARD00000000.1 na 1216967 238 Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 strain=NBRC 12535 na latest Contig Major Full 2013-04-12 ASM36732v1 National Institute of Technology and Evaluation GCA_000367325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/325/GCF_000367325.1_ASM36732v1/ na assembly from type material na haploid bacteria 3840286 3840286 36.500000 0 34 34 NCBI RefSeq GCF_000367325.1-RS_2025_08_09 2025-08-09 3465 3404 44 23846266 GCF_000367345.1 PRJNA224116 SAMD00041805 BARE00000000.1 na 1219037 121428 Sphingobium xenophagum NBRC 107872 strain=NBRC 107872 na latest Contig Major Full 2013-04-12 ASM36734v1 National Institute of Technology and Evaluation GCA_000367345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/345/GCF_000367345.1_ASM36734v1/ na assembly from type material na haploid bacteria 4486420 4486420 63.000000 0 138 138 NCBI RefSeq GCF_000367345.1-RS_2025_08_19 2025-08-19 4375 4238 55 na GCF_000367365.1 PRJNA224116 SAMD00041815 BARF00000000.1 na 1312234 67348 Streptomyces prunicolor NBRC 13075 strain=NBRC 13075 na latest Contig Major Full 2013-04-12 ASM36736v1 National Institute of Technology and Evaluation GCA_000367365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/365/GCF_000367365.1_ASM36736v1/ na assembly from type material na haploid bacteria 11760649 11760649 69.500000 0 202 202 NCBI RefSeq GCF_000367365.1-RS_2024_09_02 2024-09-02 10947 10617 84 na GCF_000367405.1 PRJNA224116 SAMN01983876 na na 1290428 782 Rickettsia prowazekii str. Breinl strain=Breinl na latest Complete Genome Major Full 2013-04-11 ASM36740v1 Naval Medical Research Center GCA_000367405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/405/GCF_000367405.1_ASM36740v1/ na assembly from type material na haploid bacteria 1109301 1109301 29.000000 1 1 1 NCBI RefSeq GCF_000367405.1-RS_2026_01_08 2026-01-08 891 817 40 23814035 GCF_000367425.1 PRJNA224116 SAMN02603584 na na 1286170 54291 Klebsiella ornithinolytica B6 strain=B6 na latest Complete Genome Major Full 2013-04-18 ASM36742v1 Macrogen Inc. GCA_000367425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/425/GCF_000367425.1_ASM36742v1/ na na na haploid bacteria 5398151 5398151 56.000000 1 1 1 NCBI RefSeq GCF_000367425.1-RS_2025_12_23 2025-12-23 5066 4905 113 23814034 GCF_000367445.1 PRJNA224116 SAMN02471609 AMWK00000000.1 na 1188234 45363 Metamycoplasma alkalescens 14918 strain=14918 na latest Contig Major Full 2013-04-18 ACN EVOLMYCO GCA_000367445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/445/GCF_000367445.1_ACN/ na na na haploid bacteria 771940 771940 25.500000 0 20 20 NCBI RefSeq GCF_000367445.1-RS_2026_02_26 2026-02-26 677 633 38 23766408 GCF_000367485.1 PRJNA224116 SAMN02471997 AKQU00000000.1 na 1172206 487 Neisseria meningitidis NMB strain=NMB na latest Contig Major Full 2013-04-18 Newbler_20120411 University of Western Australia GCA_000367485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/485/GCF_000367485.1_Newbler_20120411/ na na na haploid bacteria 2102941 2102941 52.000000 0 53 53 NCBI RefSeq GCF_000367485.1-RS_2026_01_02 2026-01-02 2133 1918 60 na GCF_000367505.1 PRJNA224116 SAMD00036730 BARH00000000.1 na 1315967 33934 Anoxybacillus flavithermus NBRC 109594 strain=NBRC 109594 na latest Contig Major Full 2013-04-16 ASM36750v1 Yamaguchi University GCA_000367505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/505/GCF_000367505.1_ASM36750v1/ na na na haploid bacteria 2772624 2772624 41.500000 0 90 90 NCBI RefSeq GCF_000367505.1-RS_2025_09_16 2025-09-16 2961 2799 112 23723406 GCF_000367525.1 PRJNA224116 SAMEA2272747 CAIZ00000000.1 reference genome 1193181 101689 Phycicoccus elongatus Lp2 strain=Lp2 na latest Scaffold Major Full 2013-04-15 ASM36752v2 Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University GCA_000367525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/525/GCF_000367525.1_ASM36752v2/ na assembly from type material na haploid bacteria 3174691 3157491 69.000000 0 1 173 NCBI RefSeq GCF_000367525.1-RS_2025_12_10 2025-12-10 3143 2970 53 23178666 GCF_000367545.1 PRJNA224116 SAMEA2272233 CAOX00000000.1 na 1255303 552 Erwinia amylovora Ea356 strain=Ea 356 na latest Contig Major Full 2013-04-12 ASM36754v2 CeBiTec GCA_000367545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/545/GCF_000367545.1_ASM36754v2/ na na na haploid bacteria 3792204 3792204 53.500000 1 15 15 NCBI RefSeq GCF_000367545.1-RS_2026_04_18 2026-04-18 3477 3294 84 na GCF_000367565.1 PRJNA224116 SAMEA2272186 CAOY00000000.1 na 1255304 552 Erwinia amylovora Ea266 strain=Ea266 na latest Contig Major Full 2013-04-12 ASM36756v2 CeBiTec GCA_000367565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/565/GCF_000367565.1_ASM36756v2/ na na na haploid bacteria 3786928 3786928 53.500000 1 39 39 NCBI RefSeq GCF_000367565.1-RS_2026_01_30 2026-01-30 3478 3266 67 na GCF_000367585.1 PRJNA224116 SAMEA2272329 CAOZ00000000.1 na 1255305 552 Erwinia amylovora CFBP 2585 strain=CFBP 2585 na latest Contig Major Full 2013-04-12 ASM36758v2 CeBiTec GCA_000367585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/585/GCF_000367585.1_ASM36758v2/ na na na haploid bacteria 3821701 3821701 53.500000 2 14 14 NCBI RefSeq GCF_000367585.1-RS_2026_01_30 2026-01-30 3511 3323 81 na GCF_000367605.1 PRJNA224116 SAMEA2272727 CAPA00000000.1 na 1255306 552 Erwinia amylovora 01SFR-BO strain=01SFR-BO na latest Contig Major Full 2013-04-12 ASM36760v2 CeBiTec GCA_000367605.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/605/GCF_000367605.1_ASM36760v2/ na na na haploid bacteria 3795813 3795813 53.500000 1 12 12 NCBI RefSeq GCF_000367605.1-RS_2026_01_30 2026-01-30 3476 3288 88 na GCF_000367625.1 PRJNA224116 SAMEA2271944 CAPB00000000.1 na 1219359 552 Erwinia amylovora NBRC 12687 = CFBP 1232 strain=type strain: CFBP 1232 na latest Contig Major Full 2013-04-12 ASM36762v2 CeBiTec GCA_000367625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/625/GCF_000367625.1_ASM36762v2/ na assembly from type material na haploid bacteria 3795525 3795525 53.500000 1 43 43 NCBI RefSeq GCF_000367625.1-RS_2025_07_15 2025-07-15 3497 3303 88 na GCF_000367645.1 PRJNA224116 SAMEA2272628 CAPC00000000.1 na 1255308 552 Erwinia amylovora UPN527 strain=UPN527 na latest Contig Major Full 2013-04-12 ASM36764v1 CeBiTec GCA_000367645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/645/GCF_000367645.1_ASM36764v1/ na na na haploid bacteria 3766970 3766970 53.500000 0 18 18 NCBI RefSeq GCF_000367645.1-RS_2026_01_30 2026-01-30 3448 3268 88 na GCF_000367725.2 PRJNA224116 SAMEA2272042 na na 1293501 777 Coxiella burnetii Z3055 strain=Z3055 na latest Complete Genome Major Full 2014-07-14 Z3055 ebi GCA_000367725.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/725/GCF_000367725.2_Z3055/ na na na haploid bacteria 1995457 1995457 42.500000 1 1 1 NCBI RefSeq GCF_000367725.2-RS_2025_06_27 2025-06-27 2155 1926 49 na GCF_000367745.1 PRJNA224116 SAMEA2272540 na na 1305598 1280 Staphylococcus aureus M1 strain=M1 na latest Chromosome Major Full 2013-04-15 ASM36774v1 KMAHVH GCA_000367745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/745/GCF_000367745.1_ASM36774v1/ na na na haploid bacteria 2891564 2870988 32.500000 2 2 6 NCBI RefSeq GCF_000367745.1-RS_2025_03_16 2025-03-16 2901 2747 64 23792746 GCF_000367765.1 PRJNA224116 SAMN02471342 AORI00000000.1 na 1188233 51363 Metamycoplasma auris 15026 strain=15026 na latest Contig Major Full 2013-04-19 version 1.0 EVOLMYCO GCA_000367765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/765/GCF_000367765.1_version_1.0/ na na na haploid bacteria 767867 767867 27.000000 0 18 18 NCBI RefSeq GCF_000367765.1-RS_2025_04_26 2025-04-26 675 631 39 23766401 GCF_000367785.1 PRJNA224116 SAMN02471341 AORG00000000.1 na 1188236 2094 Mycoplasmopsis arginini 7264 strain=7264 na latest Contig Major Full 2013-04-19 version 1.0 EVOLMYCO GCA_000367785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/785/GCF_000367785.1_version_1.0/ na na na haploid bacteria 615620 615620 26.000000 0 18 18 NCBI RefSeq GCF_000367785.1-RS_2026_02_27 2026-02-27 577 532 40 23766408 GCF_000367805.1 PRJNA224116 SAMN02471345 AORH00000000.1 na 1188235 2112 Mycoplasmopsis bovigenitalium 51080 strain=51080 na latest Contig Major Full 2013-04-19 version 1.0 EVOLMYCO GCA_000367805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/805/GCF_000367805.1_version_1.0/ na na na haploid bacteria 862704 862704 29.000000 0 43 43 NCBI RefSeq GCF_000367805.1-RS_2025_03_22 2025-03-22 762 711 38 23766408 GCF_000367825.1 PRJNA224116 SAMN02391501 APBQ00000000.1 na 1227924 303 Pseudomonas putida TRO1 strain=TRO1 na latest Contig Major Full 2013-04-19 Pseudomonas putida TRO1 Aalborg University GCA_000367825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/825/GCF_000367825.1_Pseudomonas_putida_TRO1/ na na na haploid bacteria 6315212 6315212 61.500000 0 222 222 NCBI RefSeq GCF_000367825.1-RS_2025_09_07 2025-09-07 5933 5691 69 na GCF_000367845.1 PRJNA224116 SAMN02471398 APVG00000000.1 na 1268237 502790 Aeromonas diversa CDC 2478-85 strain=2478-85 na latest Contig Major Full 2013-04-19 Adiv1.0 University of Barcelona GCA_000367845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/845/GCF_000367845.1_Adiv1.0/ na assembly from type material na haploid bacteria 4026421 4026421 61.500000 0 104 104 NCBI RefSeq GCF_000367845.1-RS_2026_01_23 2026-01-23 3870 3684 75 23792745 GCF_000367865.1 PRJNA224116 SAMN01828193 APOE00000000.1 na 1217654 471 Acinetobacter calcoaceticus NIPH 13 strain=NIPH 13 na latest Scaffold Major Full 2013-04-19 Acin_calc_NIPH_13_V1 Broad Institute GCA_000367865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/865/GCF_000367865.1_Acin_calc_NIPH_13_V1/ na na na haploid bacteria 3928504 3922088 38.500000 0 3 11 NCBI RefSeq GCF_000367865.1-RS_2025_12_22 2025-12-22 3775 3619 94 na GCF_000367885.1 PRJNA224116 SAMN01087912 APOF00000000.1 na 1217646 470 Acinetobacter baumannii NIPH 24 strain=NIPH 24 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_24_V1 Broad Institute GCA_000367885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/885/GCF_000367885.1_Acin_baum_NIPH_24_V1/ na na na haploid bacteria 3893975 3889200 39.000000 0 12 22 NCBI RefSeq GCF_000367885.1-RS_2025_12_29 2025-12-29 3717 3574 93 na GCF_000367905.1 PRJNA224116 SAMN01087911 APOG00000000.1 na 1144674 1144674 Acinetobacter sp. CIP A162 strain=CIP A162 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_A162_V1 Broad Institute GCA_000367905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/905/GCF_000367905.1_Acin_sp_CIP_A162_V1/ na na na haploid bacteria 3364056 3356935 43.000000 0 7 12 NCBI RefSeq GCF_000367905.1-RS_2025_02_19 2025-02-19 3277 3050 101 na GCF_000367925.1 PRJNA224116 SAMN01828192 APOH00000000.1 reference genome 1217715 1435036 Acinetobacter bohemicus ANC 3994 strain=ANC 3994 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_3994_V1 Broad Institute GCA_000367925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/925/GCF_000367925.1_Acin_sp_ANC_3994_V1/ na assembly from type material na haploid bacteria 3657694 3647901 39.500000 0 14 28 NCBI RefSeq GCF_000367925.1-RS_2025_12_09 2025-12-09 3439 3263 110 na GCF_000367945.1 PRJNA224116 SAMN01828191 APOI00000000.1 reference genome 1776741 1776741 Acinetobacter proteolyticus strain=NIPH 809 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_809_V1 Broad Institute GCA_000367945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/945/GCF_000367945.1_Acin_sp_NIPH_809_V1/ na assembly from type material na haploid bacteria 4313783 4249637 41.000000 0 3 32 NCBI RefSeq GCF_000367945.1-RS_2025_12_09 2025-12-09 4004 3848 93 na GCF_000367965.1 PRJNA224116 SAMN01828190 APOJ00000000.1 reference genome 1776740 1776740 Acinetobacter modestus strain=NIPH 236 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_236_V1 Broad Institute GCA_000367965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/965/GCF_000367965.1_Acin_sp_NIPH_236_V1/ na assembly from type material na haploid bacteria 3544061 3538151 38.500000 0 19 32 NCBI RefSeq GCF_000367965.1-RS_2026_05_13 2026-05-13 3433 3273 99 26822020 GCF_000367985.1 PRJNA224116 SAMN01828189 APOK00000000.1 na 40373 40373 Acinetobacter sp. CIP-A165 strain=CIP A165 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_A165_V1 Broad Institute GCA_000367985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/985/GCF_000367985.1_Acin_sp_CIP_A165_V1/ na na na haploid bacteria 3578179 3503964 40.000000 0 8 47 NCBI RefSeq GCF_000367985.1-RS_2025_02_19 2025-02-19 3375 3167 84 na GCF_000368005.1 PRJNA224116 SAMN01828187 APOL00000000.1 na 1217671 134533 Acinetobacter parvus NIPH 1103 strain=NIPH 1103 na latest Scaffold Major Full 2013-04-19 Acin_parv_NIPH_1103_V1 Broad Institute GCA_000368005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/005/GCF_000368005.1_Acin_parv_NIPH_1103_V1/ na na na haploid bacteria 3018959 2968144 41.500000 0 12 48 NCBI RefSeq GCF_000368005.1-RS_2025_12_22 2025-12-22 2986 2690 70 na GCF_000368025.1 PRJNA224116 SAMN01828186 APOM00000000.1 na 981333 134533 Acinetobacter parvus DSM 16617 = CIP 108168 strain=CIP 108168 na latest Scaffold Major Full 2013-04-19 Acin_parv_CIP108168_V1 Broad Institute GCA_000368025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/025/GCF_000368025.1_Acin_parv_CIP108168_V1/ na assembly from type material na haploid bacteria 2912642 2869820 41.500000 0 9 64 NCBI RefSeq GCF_000368025.1-RS_2025_12_10 2025-12-10 2887 2550 92 na GCF_000368045.1 PRJNA224116 SAMN01828184 APON00000000.1 na 1217663 40214 Acinetobacter johnsonii CIP 64.6 strain=CIP 64.6 na latest Scaffold Major Full 2013-04-19 Acin_john_CIP_64_6_V1 Broad Institute GCA_000368045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/045/GCF_000368045.1_Acin_john_CIP_64_6_V1/ na assembly from type material na haploid bacteria 3608403 3582699 41.500000 0 11 48 NCBI RefSeq GCF_000368045.1-RS_2025_12_22 2025-12-22 3552 3296 109 na GCF_000368085.1 PRJNA224116 SAMN01828182 APOP00000000.1 na 1217670 106654 Acinetobacter nosocomialis NIPH 2119 strain=NIPH 2119 na latest Scaffold Major Full 2013-04-19 Acin_noso_NIPH_2119_V1 Broad Institute GCA_000368085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/085/GCF_000368085.1_Acin_noso_NIPH_2119_V1/ na assembly from type material na haploid bacteria 3906876 3880908 38.500000 0 1 19 NCBI RefSeq GCF_000368085.1-RS_2025_12_23 2025-12-23 3689 3532 96 na GCF_000368105.1 PRJNA224116 SAMN01828181 APOQ00000000.1 na 1217643 470 Acinetobacter baumannii NIPH 1669 strain=NIPH 1669 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_1669_V1 Broad Institute GCA_000368105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/105/GCF_000368105.1_Acin_baum_NIPH_1669_V1/ na na na haploid bacteria 3881119 3861243 39.000000 0 6 21 NCBI RefSeq GCF_000368105.1-RS_2025_12_31 2025-12-31 3682 3515 89 na GCF_000368125.1 PRJNA224116 SAMN01828180 APOR00000000.1 na 1217642 470 Acinetobacter baumannii NIPH 1362 strain=NIPH 1362 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_1362_V1 Broad Institute GCA_000368125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/125/GCF_000368125.1_Acin_baum_NIPH_1362_V1/ na na na haploid bacteria 4112926 4086366 39.000000 0 8 32 NCBI RefSeq GCF_000368125.1-RS_2025_12_30 2025-12-30 3946 3791 84 na GCF_000368145.1 PRJNA224116 SAMN01828179 APOS00000000.1 na 1217655 106649 Acinetobacter guillouiae CIP 63.46 strain=CIP 63.46 na latest Scaffold Major Full 2013-04-19 Acin_guil_CIP_63_46_V1 Broad Institute GCA_000368145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/145/GCF_000368145.1_Acin_guil_CIP_63_46_V1/ na assembly from type material na haploid bacteria 4902283 4863018 38.000000 0 16 39 NCBI RefSeq GCF_000368145.1-RS_2025_12_23 2025-12-23 4661 4479 102 na GCF_000368165.1 PRJNA224116 SAMN01828178 APOT00000000.1 na 1217669 28090 Acinetobacter lwoffii NIPH 715 strain=NIPH 715 na latest Scaffold Major Full 2013-04-19 Acin_lwof_NIPH_715_V1 Broad Institute GCA_000368165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/165/GCF_000368165.1_Acin_lwof_NIPH_715_V1/ na na na haploid bacteria 3454560 3400693 43.000000 0 26 76 NCBI RefSeq GCF_000368165.1-RS_2025_12_23 2025-12-23 3375 3090 93 na GCF_000368185.1 PRJNA224116 SAMN01828177 APOU00000000.1 na 1217639 470 Acinetobacter baumannii NIPH 146 strain=NIPH 146 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_146_V1 Broad Institute GCA_000368185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/185/GCF_000368185.1_Acin_baum_NIPH_146_V1/ na na na haploid bacteria 3953145 3933401 39.000000 0 1 27 NCBI RefSeq GCF_000368185.1-RS_2025_12_27 2025-12-27 3748 3614 84 na GCF_000368205.1 PRJNA224116 SAMN01828176 APOV00000000.1 na 1217641 470 Acinetobacter baumannii NIPH 615 strain=NIPH 615 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_615_V1 Broad Institute GCA_000368205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/205/GCF_000368205.1_Acin_baum_NIPH_615_V1/ na na na haploid bacteria 3973846 3941555 39.000000 0 12 39 NCBI RefSeq GCF_000368205.1-RS_2026_01_22 2026-01-22 3821 3542 94 na GCF_000368225.1 PRJNA224116 SAMN01828175 APOW00000000.1 na 1217645 470 Acinetobacter baumannii NIPH 2061 strain=NIPH 2061 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_2061_V1 Broad Institute GCA_000368225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/225/GCF_000368225.1_Acin_baum_NIPH_2061_V1/ na na na haploid bacteria 3985488 3970958 39.000000 0 12 20 NCBI RefSeq GCF_000368225.1-RS_2025_12_29 2025-12-29 3816 3674 81 na GCF_000368245.1 PRJNA224116 SAMN01828174 APOX00000000.1 na 1217644 470 Acinetobacter baumannii NIPH 1734 strain=NIPH 1734 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_1734_V1 Broad Institute GCA_000368245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/245/GCF_000368245.1_Acin_baum_NIPH_1734_V1/ na na na haploid bacteria 3974764 3914908 39.000000 0 11 28 NCBI RefSeq GCF_000368245.1-RS_2025_12_30 2025-12-30 3741 3594 67 na GCF_000368265.1 PRJNA224116 SAMN01828173 APOY00000000.1 reference genome 1217714 1217714 Acinetobacter brisouisimilis strain=ANC 3789 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_3789_V1 Broad Institute GCA_000368265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/265/GCF_000368265.1_Acin_sp_ANC_3789_V1/ na assembly from type material na haploid bacteria 3248600 3238278 41.000000 0 11 25 NCBI RefSeq GCF_000368265.1-RS_2026_06_06 2026-06-06 3100 2954 74 na GCF_000368285.1 PRJNA224116 SAMN01828172 APOZ00000000.1 na 1144667 1144667 Acinetobacter sp. CIP 102159 strain=CIP 102159 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102159_V1 Broad Institute GCA_000368285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/285/GCF_000368285.1_Acin_sp_CIP_102159_V1/ na na na haploid bacteria 2973263 2875069 41.500000 0 2 83 NCBI RefSeq GCF_000368285.1-RS_2025_02_19 2025-02-19 2895 2568 82 na GCF_000368305.1 PRJNA224116 SAMN01828171 APPA00000000.1 na 1144664 1144664 Acinetobacter sp. CIP 102129 strain=CIP 102129 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102129_V1 Broad Institute GCA_000368305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/305/GCF_000368305.1_Acin_sp_CIP_102129_V1/ na na na haploid bacteria 2997897 2945942 42.000000 0 11 42 NCBI RefSeq GCF_000368305.1-RS_2025_02_19 2025-02-19 2893 2624 65 na GCF_000368325.1 PRJNA224116 SAMN01828170 APPB00000000.1 na 1144668 1144668 Acinetobacter sp. CIP 102529 strain=CIP 102529 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102529_V1 Broad Institute GCA_000368325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/325/GCF_000368325.1_Acin_sp_CIP_102529_V1/ na na na haploid bacteria 3027203 2988319 41.500000 0 13 65 NCBI RefSeq GCF_000368325.1-RS_2025_02_19 2025-02-19 3019 2656 90 na GCF_000368365.1 PRJNA224116 SAMN01828168 APPD00000000.1 na 1144663 1144663 Acinetobacter sp. CIP 102082 strain=CIP 102082 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102082_V1 Broad Institute GCA_000368365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/365/GCF_000368365.1_Acin_sp_CIP_102082_V1/ na na na haploid bacteria 3010293 2937770 41.500000 0 16 74 NCBI RefSeq GCF_000368365.1-RS_2025_02_19 2025-02-19 2945 2593 80 na GCF_000368405.1 PRJNA224116 SAMN01828166 APPF00000000.1 na 520708 520708 Acinetobacter sp. NIPH 817 strain=NIPH 817 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH817_V1 Broad Institute GCA_000368405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/405/GCF_000368405.1_Acin_sp_NIPH817_V1/ na na na haploid bacteria 4118901 4087965 38.500000 0 16 37 NCBI RefSeq GCF_000368405.1-RS_2025_02_19 2025-02-19 3944 3787 81 na GCF_000368425.1 PRJNA224116 SAMN01087910 APPG00000000.1 na 1144669 1144669 Acinetobacter sp. CIP 102637 strain=CIP 102637 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102637_V1 Broad Institute GCA_000368425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/425/GCF_000368425.1_Acin_sp_CIP_102637_V1/ na na na haploid bacteria 2784022 2748158 42.000000 0 5 41 NCBI RefSeq GCF_000368425.1-RS_2025_02_19 2025-02-19 2714 2433 89 na GCF_000368445.1 PRJNA224116 SAMN01087914 APPH00000000.1 na 70347 70347 Acinetobacter higginsii strain=CIP 56.2 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_56_2_V1 Broad Institute GCA_000368445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/445/GCF_000368445.1_Acin_sp_CIP_56_2_V1/ na na na haploid bacteria 4367771 4319982 41.000000 0 4 24 NCBI RefSeq GCF_000368445.1-RS_2025_02_19 2025-02-19 4109 3957 93 na GCF_000368465.1 PRJNA224116 SAMN01087915 APPI00000000.1 na 1217675 108981 Acinetobacter schindleri NIPH 900 strain=NIPH 900 na latest Scaffold Major Full 2013-04-19 Acin_schi_NIPH_900_V1 Broad Institute GCA_000368465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/465/GCF_000368465.1_Acin_schi_NIPH_900_V1/ na na na haploid bacteria 3414896 3404540 42.500000 0 12 25 NCBI RefSeq GCF_000368465.1-RS_2025_12_23 2025-12-23 3338 3143 85 na GCF_000368485.1 PRJNA224116 SAMN01087917 APPJ00000000.1 na 1217656 106649 Acinetobacter guillouiae NIPH 991 strain=NIPH 991 na latest Scaffold Major Full 2013-04-19 Acin_guil_NIPH_991_V1 Broad Institute GCA_000368485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/485/GCF_000368485.1_Acin_guil_NIPH_991_V1/ na na na haploid bacteria 4905772 4878616 38.000000 0 4 17 NCBI RefSeq GCF_000368485.1-RS_2025_12_23 2025-12-23 4556 4413 89 na GCF_000368505.1 PRJNA224116 SAMN01087916 APPK00000000.1 na 1217651 106648 Acinetobacter bereziniae NIPH 3 strain=NIPH 3 na latest Scaffold Major Full 2013-04-19 Acin_bere_NIPH_3_V1 Broad Institute GCA_000368505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/505/GCF_000368505.1_Acin_bere_NIPH_3_V1/ na na na haploid bacteria 4978275 4925988 38.000000 0 12 60 NCBI RefSeq GCF_000368505.1-RS_2025_12_23 2025-12-23 4636 4448 75 na GCF_000368525.1 PRJNA224116 SAMN01828165 APPL00000000.1 na 1217640 470 Acinetobacter baumannii NIPH 190 strain=NIPH 190 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_190_V1 Broad Institute GCA_000368525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/525/GCF_000368525.1_Acin_baum_NIPH_190_V1/ na na na haploid bacteria 3949859 3899398 39.000000 0 11 48 NCBI RefSeq GCF_000368525.1-RS_2026_01_22 2026-01-22 3848 3524 86 na GCF_000368545.1 PRJNA224116 SAMN01087913 APPM00000000.1 na 1217647 470 Acinetobacter baumannii NIPH 60 strain=NIPH 60 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_60_V1 Broad Institute GCA_000368545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/545/GCF_000368545.1_Acin_baum_NIPH_60_V1/ na na na haploid bacteria 3981253 3946627 39.000000 0 33 65 NCBI RefSeq GCF_000368545.1-RS_2026_02_08 2026-02-08 3866 3576 96 na GCF_000368565.1 PRJNA224116 SAMN01087849 APPN00000000.1 reference genome 1120926 202952 Acinetobacter gerneri DSM 14967 = CIP 107464 = MTCC 9824 strain=CIP 107464 na latest Scaffold Major Full 2013-04-19 Acin_gern_CIP_107464_V1 Broad Institute GCA_000368565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/565/GCF_000368565.1_Acin_gern_CIP_107464_V1/ na assembly from type material na haploid bacteria 4595172 4520036 37.500000 0 42 84 NCBI RefSeq GCF_000368565.1-RS_2025_09_09 2025-09-09 4299 4110 97 na GCF_000368585.1 PRJNA224116 SAMN01087854 APPO00000000.1 reference genome 1191460 52133 Acinetobacter venetianus RAG-1 = CIP 110063 strain=CIP 110063 na latest Scaffold Major Full 2013-04-19 Acin_vene_CIP_110063_V1 Broad Institute GCA_000368585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/585/GCF_000368585.1_Acin_vene_CIP_110063_V1/ na assembly from type material na haploid bacteria 3458264 3431512 39.000000 0 5 21 NCBI RefSeq GCF_000368585.1-RS_2025_12_10 2025-12-10 3298 3172 89 na GCF_000368605.1 PRJNA224116 SAMN01828164 APPP00000000.1 na 1217985 106654 Acinetobacter nosocomialis NIPH 386 strain=NIPH 386 na latest Scaffold Major Full 2013-04-19 Acin_noso_NIPH_386_V1 Broad Institute GCA_000368605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/605/GCF_000368605.1_Acin_noso_NIPH_386_V1/ na na na haploid bacteria 4046703 4034803 38.500000 0 10 15 NCBI RefSeq GCF_000368605.1-RS_2026_03_30 2026-03-30 3924 3696 89 na GCF_000368625.1 PRJNA224116 SAMN01828163 APPQ00000000.1 na 1217988 108981 Acinetobacter schindleri CIP 107287 strain=CIP 107287 na latest Scaffold Major Full 2013-04-19 Acin_schi_CIP107287_V1 Broad Institute GCA_000368625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/625/GCF_000368625.1_Acin_schi_CIP107287_V1/ na assembly from type material na haploid bacteria 3394558 3358322 42.000000 0 18 33 NCBI RefSeq GCF_000368625.1-RS_2025_12_23 2025-12-23 3269 3107 91 na GCF_000368645.1 PRJNA224116 SAMN01087848 APPR00000000.1 na 1217652 396323 Acinetobacter brisouii ANC 4119 strain=ANC 4119 na latest Scaffold Major Full 2013-04-19 Acin_bris_ANC_4119_V1 Broad Institute GCA_000368645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/645/GCF_000368645.1_Acin_bris_ANC_4119_V1/ na na na haploid bacteria 3146639 3108690 41.500000 0 8 20 NCBI RefSeq GCF_000368645.1-RS_2025_12_23 2025-12-23 2997 2874 74 na GCF_000368665.1 PRJNA224116 SAMN01087850 APPS00000000.1 na 1217666 40215 Acinetobacter junii CIP 107470 = MTCC 11364 strain=CIP 107470 na latest Scaffold Major Full 2013-04-19 Acin_grim_CIP_107470_V1 Broad Institute GCA_000368665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/665/GCF_000368665.1_Acin_grim_CIP_107470_V1/ na assembly from heterotypic synonym type material na haploid bacteria 3782348 3705684 38.500000 0 25 81 NCBI RefSeq GCF_000368665.1-RS_2025_12_23 2025-12-23 3606 3297 75 na GCF_000368685.1 PRJNA224116 SAMN01087846 APPT00000000.1 na 1120924 202950 Acinetobacter baylyi DSM 14961 = CIP 107474 strain=CIP 107474 na latest Scaffold Major Full 2013-04-19 Acin_bayl_CIP_107474_V1 Broad Institute GCA_000368685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/685/GCF_000368685.1_Acin_bayl_CIP_107474_V1/ na assembly from type material na haploid bacteria 3611649 3595248 40.500000 0 10 18 NCBI RefSeq GCF_000368685.1-RS_2026_01_07 2026-01-07 3344 3202 89 na GCF_000368705.1 PRJNA224116 SAMN01087844 APPU00000000.1 na 1217676 487316 Acinetobacter soli CIP 110264 strain=CIP 110264 na latest Scaffold Major Full 2013-04-19 Acin_soli_CIP_110264_V1 Broad Institute GCA_000368705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/705/GCF_000368705.1_Acin_soli_CIP_110264_V1/ na assembly from type material na haploid bacteria 3359986 3350586 43.000000 0 9 17 NCBI RefSeq GCF_000368705.1-RS_2026_03_30 2026-03-30 3170 3045 88 na GCF_000368725.1 PRJNA224116 SAMN01087845 APPV00000000.1 na 1217677 487316 Acinetobacter soli NIPH 2899 strain=NIPH 2899 na latest Scaffold Major Full 2013-04-19 Acin_soli_NIPH_2899_V1 Broad Institute GCA_000368725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/725/GCF_000368725.1_Acin_soli_NIPH_2899_V1/ na na na haploid bacteria 3463506 3451111 43.000000 0 3 13 NCBI RefSeq GCF_000368725.1-RS_2025_12_23 2025-12-23 3239 3097 96 na GCF_000368745.1 PRJNA224116 SAMN01828162 APPW00000000.1 na 1217665 40215 Acinetobacter junii NIPH 182 strain=NIPH 182 na latest Scaffold Major Full 2013-04-19 Acin_juni_NIPH_182_V1 Broad Institute GCA_000368745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/745/GCF_000368745.1_Acin_juni_NIPH_182_V1/ na na na haploid bacteria 3310173 3306847 38.500000 0 9 14 NCBI RefSeq GCF_000368745.1-RS_2025_12_23 2025-12-23 3176 3050 98 na GCF_000368765.1 PRJNA224116 SAMN01828161 APPX00000000.1 na 1217664 40215 Acinetobacter junii CIP 64.5 strain=CIP 64.5 na latest Scaffold Major Full 2013-04-19 Acin_juni_CIP_64_5_V1 Broad Institute GCA_000368765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/765/GCF_000368765.1_Acin_juni_CIP_64_5_V1/ na assembly from type material na haploid bacteria 3357744 3330618 39.000000 0 7 41 NCBI RefSeq GCF_000368765.1-RS_2025_12_23 2025-12-23 3176 2934 100 na GCF_000368785.1 PRJNA224116 SAMN01087853 APPY00000000.1 na 1120929 202956 Acinetobacter towneri DSM 14962 = CIP 107472 strain=CIP 107472 na latest Scaffold Major Full 2013-04-19 Acin_town_CIP_107472_V1 Broad Institute GCA_000368785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/785/GCF_000368785.1_Acin_town_CIP_107472_V1/ na assembly from type material na haploid bacteria 2952354 2898609 41.000000 0 42 78 NCBI RefSeq GCF_000368785.1-RS_2026_01_07 2026-01-07 2856 2678 83 na GCF_000368805.1 PRJNA224116 SAMN01087830 APPZ00000000.1 reference genome 1217662 40214 Acinetobacter johnsonii ANC 3681 strain=ANC 3681 na latest Scaffold Major Full 2013-04-19 Acin_john_ANC_3681_V1 Broad Institute GCA_000368805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/805/GCF_000368805.1_Acin_john_ANC_3681_V1/ na na na haploid bacteria 3540498 3536698 41.500000 0 8 11 NCBI RefSeq GCF_000368805.1-RS_2025_12_10 2025-12-10 3399 3238 110 na GCF_000368825.1 PRJNA224116 SAMN01087837 APQA00000000.1 na 981336 108980 Acinetobacter ursingii DSM 16037 = CIP 107286 strain=CIP 107286 na latest Scaffold Major Full 2013-04-19 Acin_ursi_CIP_107286_V1 Broad Institute GCA_000368825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/825/GCF_000368825.1_Acin_ursi_CIP_107286_V1/ na assembly from type material na haploid bacteria 3535739 3486509 40.000000 0 10 29 NCBI RefSeq GCF_000368825.1-RS_2026_01_07 2026-01-07 3327 3136 81 na GCF_000368845.1 PRJNA224116 SAMN01087839 APQC00000000.1 na 1257043 108980 Acinetobacter ursingii ANC 3649 strain=ANC 3649 na latest Scaffold Major Full 2013-04-19 Acin_ursi_NIPH_ANC_3649_V1 Broad Institute GCA_000368845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/845/GCF_000368845.1_Acin_ursi_NIPH_ANC_3649_V1/ na na na haploid bacteria 3825484 3798198 40.000000 0 5 31 NCBI RefSeq GCF_000368845.1-RS_2025_12_23 2025-12-23 3636 3427 96 na GCF_000368865.1 PRJNA224116 SAMN01087847 APQD00000000.1 na 1120925 202951 Acinetobacter bouvetii DSM 14964 = CIP 107468 strain=CIP 107468 na latest Scaffold Major Full 2013-04-19 Acin_bouv_CIP_107468_V1 Broad Institute GCA_000368865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/865/GCF_000368865.1_Acin_bouv_CIP_107468_V1/ na assembly from type material na haploid bacteria 3388822 3369793 45.000000 0 6 24 NCBI RefSeq GCF_000368865.1-RS_2026_01_07 2026-01-07 3222 3061 106 na GCF_000368885.1 PRJNA224116 SAMN01087836 APQE00000000.1 na 1217674 40216 Acinetobacter radioresistens NIPH 2130 strain=NIPH 2130 na latest Scaffold Major Full 2013-04-19 Acin_radi_NIPH_2130_V1 Broad Institute GCA_000368885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/885/GCF_000368885.1_Acin_radi_NIPH_2130_V1/ na na na haploid bacteria 3164924 3158774 41.500000 0 6 13 NCBI RefSeq GCF_000368885.1-RS_2025_12_23 2025-12-23 3002 2878 84 na GCF_000368905.1 PRJNA224116 SAMN01087835 APQF00000000.1 na 981334 40216 Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain=CIP 103788 na latest Scaffold Major Full 2013-04-19 Acin_radi_CIP_103788_V1 Broad Institute GCA_000368905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/905/GCF_000368905.1_Acin_radi_CIP_103788_V1/ na assembly from type material na haploid bacteria 3195486 3173469 41.500000 0 13 23 NCBI RefSeq GCF_000368905.1-RS_2026_01_07 2026-01-07 3010 2871 82 na GCF_000368925.1 PRJNA224116 SAMN01087834 APQG00000000.1 na 981324 106648 Acinetobacter bereziniae LMG 1003 = CIP 70.12 strain=CIP 70.12 na latest Scaffold Major Full 2013-04-19 Acin_bere_CIP_70_12_V1 Broad Institute GCA_000368925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/925/GCF_000368925.1_Acin_bere_CIP_70_12_V1/ na assembly from type material na haploid bacteria 5026532 4947312 38.000000 0 3 52 NCBI RefSeq GCF_000368925.1-RS_2025_12_23 2025-12-23 4726 4531 101 na GCF_000368945.1 PRJNA224116 SAMN01828160 APQH00000000.1 na 1217653 471 Acinetobacter calcoaceticus ANC 3680 strain=ANC 3680 na latest Scaffold Major Full 2013-04-19 Acin_calc_ANC_3680_V1 Broad Institute GCA_000368945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/945/GCF_000368945.1_Acin_calc_ANC_3680_V1/ na na na haploid bacteria 4074938 4071058 38.500000 0 4 8 NCBI RefSeq GCF_000368945.1-RS_2025_12_23 2025-12-23 3916 3748 105 na GCF_000368965.1 PRJNA224116 SAMN01828159 APQI00000000.1 na 981331 471 Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 strain=CIP 81.8 na latest Scaffold Major Full 2013-04-19 Acin_calc_CIP_81_8_V1 Broad Institute GCA_000368965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/965/GCF_000368965.1_Acin_calc_CIP_81_8_V1/ na assembly from type material na haploid bacteria 3929658 3926967 38.500000 0 7 12 NCBI RefSeq GCF_000368965.1-RS_2026_01_07 2026-01-07 3764 3603 97 na GCF_000368985.1 PRJNA224116 SAMN01087843 APQK00000000.1 na 1217649 262668 Acinetobacter beijerinckii ANC 3835 strain=ANC 3835 na latest Scaffold Major Full 2013-04-19 Acin_beij_ANC_3835_V1 Broad Institute GCA_000368985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/368/985/GCF_000368985.1_Acin_beij_ANC_3835_V1/ na na na haploid bacteria 3547677 3535053 38.500000 0 6 19 NCBI RefSeq GCF_000368985.1-RS_2025_12_23 2025-12-23 3379 3236 98 na GCF_000369005.1 PRJNA224116 SAMN01087842 APQL00000000.1 reference genome 1217648 262668 Acinetobacter beijerinckii CIP 110307 strain=CIP 110307 na latest Scaffold Major Full 2013-04-19 Acin_beij_CIP_110307_V1 Broad Institute GCA_000369005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/005/GCF_000369005.1_Acin_beij_CIP_110307_V1/ na assembly from type material na haploid bacteria 3563334 3556901 38.500000 0 5 13 NCBI RefSeq GCF_000369005.1-RS_2026_03_30 2026-03-30 3392 3258 89 na GCF_000369025.1 PRJNA224116 SAMN01828156 APQN00000000.1 na 1217673 48296 Acinetobacter pittii ANC 3678 strain=ANC 3678 na latest Scaffold Major Full 2013-04-19 Acin_pitt_ANC_3678_V1 Broad Institute GCA_000369025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/025/GCF_000369025.1_Acin_pitt_ANC_3678_V1/ na na na haploid bacteria 3959833 3950554 39.000000 0 10 25 NCBI RefSeq GCF_000369025.1-RS_2025_02_19 2025-02-19 3802 3639 78 na GCF_000369045.1 PRJNA224116 SAMN01828154 APQP00000000.1 na 1311774 48296 Acinetobacter pittii ATCC 19004 = CIP 70.29 strain=CIP 70.29 na latest Scaffold Major Full 2013-04-19 Acin_pitt_CIP_70_29_V1 Broad Institute GCA_000369045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/045/GCF_000369045.1_Acin_pitt_CIP_70_29_V1/ na assembly from type material na haploid bacteria 3830310 3796866 39.000000 0 13 33 NCBI RefSeq GCF_000369045.1-RS_2025_02_26 2025-02-26 3631 3483 102 na GCF_000369065.1 PRJNA224116 SAMN01828153 APQQ00000000.1 na 1217659 29430 Acinetobacter haemolyticus CIP 64.3 = MTCC 9819 strain=CIP 64.3 na latest Scaffold Major Full 2013-04-19 Acin_haem_CIP_64_3_V1 Broad Institute GCA_000369065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/065/GCF_000369065.1_Acin_haem_CIP_64_3_V1/ na assembly from type material na haploid bacteria 3513082 3486821 39.500000 0 15 32 NCBI RefSeq GCF_000369065.1-RS_2025_12_23 2025-12-23 3337 3144 78 na GCF_000369085.1 PRJNA224116 SAMN01828152 APQR00000000.1 na 1217986 29430 Acinetobacter haemolyticus NIPH 261 strain=NIPH 261 na latest Scaffold Major Full 2013-04-19 Acin_haem_NIPH_261_V1 Broad Institute GCA_000369085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/085/GCF_000369085.1_Acin_haem_NIPH_261_V1/ na na na haploid bacteria 3531257 3517917 39.500000 0 7 17 NCBI RefSeq GCF_000369085.1-RS_2025_12_23 2025-12-23 3421 3212 79 na GCF_000369125.1 PRJNA224116 SAMN01087832 APQT00000000.1 na 1311804 28090 Acinetobacter lwoffii ATCC 9957 = CIP 70.31 strain=CIP 70.31 na latest Scaffold Major Full 2013-04-19 Acin_lwof_CIP_70_31_V1 Broad Institute GCA_000369125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/125/GCF_000369125.1_Acin_lwof_CIP_70_31_V1/ na na na haploid bacteria 3677680 3546109 43.000000 0 12 79 NCBI RefSeq GCF_000369125.1-RS_2025_12_23 2025-12-23 3551 3242 93 na GCF_000369145.1 PRJNA224116 SAMN01087833 APQU00000000.1 na 1217668 28090 Acinetobacter lwoffii NIPH 478 strain=NIPH 478 na latest Scaffold Major Full 2013-04-19 Acin_lwof_NIPH_478_V1 Broad Institute GCA_000369145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/145/GCF_000369145.1_Acin_lwof_NIPH_478_V1/ na na na haploid bacteria 3301256 3276129 43.000000 0 9 27 NCBI RefSeq GCF_000369145.1-RS_2026_03_30 2026-03-30 3160 2958 82 na GCF_000369165.1 PRJNA224116 SAMN01828151 APQV00000000.1 na 1217630 470 Acinetobacter baumannii NIPH 201 strain=NIPH 201 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_201_V1 Broad Institute GCA_000369165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/165/GCF_000369165.1_Acin_baum_NIPH_201_V1/ na na na haploid bacteria 4134589 4110685 39.000000 0 9 23 NCBI RefSeq GCF_000369165.1-RS_2025_12_30 2025-12-30 3940 3767 93 na GCF_000369185.1 PRJNA224116 SAMN01828150 APQW00000000.1 na 1217635 470 Acinetobacter baumannii NIPH 527 strain=NIPH 527 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_527_V1 Broad Institute GCA_000369185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/185/GCF_000369185.1_Acin_baum_NIPH_527_V1/ na na na haploid bacteria 4188001 4152121 39.000000 0 18 31 NCBI RefSeq GCF_000369185.1-RS_2025_12_30 2025-12-30 4036 3868 92 na GCF_000369205.1 PRJNA224116 SAMN01828149 APQX00000000.1 na 1217633 470 Acinetobacter baumannii NIPH 335 strain=NIPH 335 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_335_V1 Broad Institute GCA_000369205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/205/GCF_000369205.1_Acin_baum_NIPH_335_V1/ na na na haploid bacteria 3956965 3923854 39.000000 0 15 29 NCBI RefSeq GCF_000369205.1-RS_2026_01_22 2026-01-22 3826 3612 90 na GCF_000369225.1 PRJNA224116 SAMN01828148 APQY00000000.1 na 1217632 470 Acinetobacter baumannii NIPH 329 strain=NIPH 329 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_329_V1 Broad Institute GCA_000369225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/225/GCF_000369225.1_Acin_baum_NIPH_329_V1/ na na na haploid bacteria 4005748 3994296 39.000000 0 8 14 NCBI RefSeq GCF_000369225.1-RS_2025_12_29 2025-12-29 3839 3700 92 na GCF_000369245.1 PRJNA224116 SAMN01828147 APQZ00000000.1 na 1217637 470 Acinetobacter baumannii NIPH 601 strain=NIPH 601 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_601_V1 Broad Institute GCA_000369245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/245/GCF_000369245.1_Acin_baum_NIPH_601_V1/ na na na haploid bacteria 4059649 4021265 39.000000 0 10 19 NCBI RefSeq GCF_000369245.1-RS_2026_01_22 2026-01-22 3857 3630 105 na GCF_000369265.1 PRJNA224116 SAMN01828146 APRA00000000.1 na 1217627 470 Acinetobacter baumannii NIPH 67 strain=NIPH 67 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_67_V1 Broad Institute GCA_000369265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/265/GCF_000369265.1_Acin_baum_NIPH_67_V1/ na na na haploid bacteria 4050754 4047599 39.000000 0 5 11 NCBI RefSeq GCF_000369265.1-RS_2025_12_29 2025-12-29 3784 3639 94 na GCF_000369285.1 PRJNA224116 SAMN01828145 APRB00000000.1 na 1217636 470 Acinetobacter baumannii NIPH 528 strain=NIPH 528 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_528_V1 Broad Institute GCA_000369285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/285/GCF_000369285.1_Acin_baum_NIPH_528_V1/ na na na haploid bacteria 3878960 3869750 39.000000 0 7 12 NCBI RefSeq GCF_000369285.1-RS_2025_12_30 2025-12-30 3665 3531 86 na GCF_000369305.1 PRJNA224116 SAMN01828144 APRC00000000.1 na 1217628 470 Acinetobacter baumannii NIPH 70 strain=NIPH 70 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_70_V1 Broad Institute GCA_000369305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/305/GCF_000369305.1_Acin_baum_NIPH_70_V1/ na na na haploid bacteria 4062079 3926921 39.000000 0 15 57 NCBI RefSeq GCF_000369305.1-RS_2026_01_22 2026-01-22 3877 3653 88 na GCF_000369325.1 PRJNA224116 SAMN01828143 APRD00000000.1 na 1217631 470 Acinetobacter baumannii NIPH 290 strain=NIPH 290 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_290_V1 Broad Institute GCA_000369325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/325/GCF_000369325.1_Acin_baum_NIPH_290_V1/ na na na haploid bacteria 4026493 4022026 39.500000 0 14 28 NCBI RefSeq GCF_000369325.1-RS_2025_12_30 2025-12-30 3951 3781 94 na GCF_000369345.1 PRJNA224116 SAMN01828142 APRE00000000.1 na 1217629 470 Acinetobacter baumannii NIPH 80 strain=NIPH 80 na latest Scaffold Major Full 2013-04-19 Acin_baum_NIPH_80_V1 Broad Institute GCA_000369345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/345/GCF_000369345.1_Acin_baum_NIPH_80_V1/ na na na haploid bacteria 4068647 3957396 39.000000 0 9 89 NCBI RefSeq GCF_000369345.1-RS_2026_02_11 2026-02-11 3995 3632 81 na GCF_000369365.1 PRJNA224116 SAMN01828141 APRF00000000.1 na 1217638 470 Acinetobacter baumannii ANC 4097 strain=ANC 4097 na latest Scaffold Major Full 2013-04-19 Acin_baum_ANC_4097_V1 Broad Institute GCA_000369365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/365/GCF_000369365.1_Acin_baum_ANC_4097_V1/ na na na haploid bacteria 4252583 4235983 39.000000 0 19 31 NCBI RefSeq GCF_000369365.1-RS_2026_02_09 2026-02-09 4147 3990 94 na GCF_000369385.1 PRJNA224116 SAMN01828140 APRG00000000.1 na 575584 470 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain=CIP 70.34 na latest Scaffold Major Full 2013-04-19 Acin_baum_CIP_70_34T_V1 Broad Institute GCA_000369385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/385/GCF_000369385.1_Acin_baum_CIP_70_34T_V1/ na assembly from type material na haploid bacteria 4028903 4026363 39.000000 0 23 32 NCBI RefSeq GCF_000369385.1-RS_2026_01_07 2026-01-07 3871 3703 108 na GCF_000369405.1 PRJNA224116 SAMN01828138 APRH00000000.1 na 1217707 1217707 Acinetobacter sp. ANC 3929 strain=ANC 3929 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_3929_V1 Broad Institute GCA_000369405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/405/GCF_000369405.1_Acin_sp_ANC_3929_V1/ na na na haploid bacteria 4287739 4247806 40.500000 0 10 30 NCBI RefSeq GCF_000369405.1-RS_2025_02_19 2025-02-19 4138 3954 81 na GCF_000369425.1 PRJNA224116 SAMN01087868 APRI00000000.1 na 1217704 1217704 Acinetobacter sp. NIPH 284 strain=NIPH 284 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_284_V1 Broad Institute GCA_000369425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/425/GCF_000369425.1_Acin_sp_NIPH_284_V1/ na na na haploid bacteria 3190612 3164170 39.000000 0 22 43 NCBI RefSeq GCF_000369425.1-RS_2025_02_19 2025-02-19 3098 2810 81 na GCF_000369465.1 PRJNA224116 SAMN01828136 APRK00000000.1 na 1144671 1144671 Acinetobacter sp. CIP 53.82 strain=CIP 53.82 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_53_82_V1 Broad Institute GCA_000369465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/465/GCF_000369465.1_Acin_sp_CIP_53_82_V1/ na na na haploid bacteria 3150340 3120246 46.000000 0 11 22 NCBI RefSeq GCF_000369465.1-RS_2025_02_19 2025-02-19 3024 2847 96 na GCF_000369485.1 PRJNA224116 SAMN01087867 APRL00000000.1 na 70348 70348 Acinetobacter dispersus strain=ANC 4105 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_4105_V1 Broad Institute GCA_000369485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/485/GCF_000369485.1_Acin_sp_ANC_4105_V1/ na assembly from type material na haploid bacteria 4106934 4099634 40.500000 0 5 15 NCBI RefSeq GCF_000369485.1-RS_2026_05_13 2026-05-13 3892 3757 85 26822020 GCF_000369505.1 PRJNA224116 SAMN01087856 APRM00000000.1 na 1217692 1217692 Acinetobacter sp. NIPH 298 strain=NIPH 298 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_298_V1 Broad Institute GCA_000369505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/505/GCF_000369505.1_Acin_sp_NIPH_298_V1/ na na na haploid bacteria 3486837 3462613 40.000000 0 4 14 NCBI RefSeq GCF_000369505.1-RS_2025_02_19 2025-02-19 3282 3149 91 na GCF_000369525.1 PRJNA224116 SAMN01087864 APRN00000000.1 na 70347 70347 Acinetobacter higginsii strain=CIP 70.18 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_70_18_V1 Broad Institute GCA_000369525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/525/GCF_000369525.1_Acin_sp_CIP_70_18_V1/ na assembly from type material na haploid bacteria 4663178 4596798 40.500000 0 28 50 NCBI RefSeq GCF_000369525.1-RS_2026_04_05 2026-04-05 4424 4244 87 na GCF_000369545.1 PRJNA224116 SAMN01087866 APRO00000000.1 na 70348 70348 Acinetobacter dispersus strain=NIPH 1867 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_1867_V1 Broad Institute GCA_000369545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/545/GCF_000369545.1_Acin_sp_NIPH_1867_V1/ na na na haploid bacteria 3939333 3935412 40.500000 0 2 9 NCBI RefSeq GCF_000369545.1-RS_2026_05_13 2026-05-13 3700 3571 94 26822020 GCF_000369565.1 PRJNA224116 SAMN01087869 APRP00000000.1 na 1776740 1776740 Acinetobacter modestus strain=ANC 3862 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_3862_V1 Broad Institute GCA_000369565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/565/GCF_000369565.1_Acin_sp_ANC_3862_V1/ na na na haploid bacteria 3835357 3780399 38.500000 0 3 36 NCBI RefSeq GCF_000369565.1-RS_2026_05_22 2026-05-22 3687 3565 77 26822020 GCF_000369585.1 PRJNA224116 SAMN01828135 APRQ00000000.1 na 1144661 1144661 Acinetobacter sp. CIP 101934 strain=CIP 101934 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_101934_V1 Broad Institute GCA_000369585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/585/GCF_000369585.1_Acin_sp_CIP_101934_V1/ na na na haploid bacteria 3205996 3186404 42.500000 0 17 41 NCBI RefSeq GCF_000369585.1-RS_2025_02_19 2025-02-19 3063 2909 94 na GCF_000369605.1 PRJNA224116 SAMN01087861 APRR00000000.1 na 280147 280147 Acinetobacter courvalinii strain=NIPH 1847 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_1847_V1 Broad Institute GCA_000369605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/605/GCF_000369605.1_Acin_sp_NIPH_1847_V1/ na na na haploid bacteria 3954090 3916558 43.000000 0 4 16 NCBI RefSeq GCF_000369605.1-RS_2026_05_13 2026-05-13 3744 3613 79 26822020 GCF_000369645.1 PRJNA224116 SAMN01087858 APRT00000000.1 na 1217694 1217694 Acinetobacter sp. CIP 64.2 strain=CIP 64.2 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_64_2_V1 Broad Institute GCA_000369645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/645/GCF_000369645.1_Acin_sp_CIP_64_2_V1/ na na na haploid bacteria 4049142 3991108 41.500000 0 9 31 NCBI RefSeq GCF_000369645.1-RS_2025_02_19 2025-02-19 3851 3624 91 na GCF_000369665.1 PRJNA224116 SAMN01828134 APRU00000000.1 na 1144670 1144670 Acinetobacter sp. CIP 51.11 strain=CIP 51.11 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_51_11_V1 Broad Institute GCA_000369665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/665/GCF_000369665.1_Acin_sp_CIP_51_11_V1/ na na na haploid bacteria 3143762 3133520 43.000000 0 5 11 NCBI RefSeq GCF_000369665.1-RS_2025_02_19 2025-02-19 2987 2819 111 na GCF_000369685.1 PRJNA224116 SAMN01828133 APRV00000000.1 na 1144665 1144665 Acinetobacter sp. CIP 102136 strain=CIP 102136 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102136_V1 Broad Institute GCA_000369685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/685/GCF_000369685.1_Acin_sp_CIP_102136_V1/ na na na haploid bacteria 3606614 3559292 42.500000 0 20 51 NCBI RefSeq GCF_000369685.1-RS_2025_02_16 2025-02-16 3470 3220 96 na GCF_000369705.1 PRJNA224116 SAMN01828132 APRW00000000.1 na 1776742 1776742 Acinetobacter vivianii strain=NIPH 2168 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_2168_V1 Broad Institute GCA_000369705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/705/GCF_000369705.1_Acin_sp_NIPH_2168_V1/ na assembly from type material na haploid bacteria 4084898 4025291 41.500000 0 3 16 NCBI RefSeq GCF_000369705.1-RS_2026_05_22 2026-05-22 3780 3635 97 26822020 GCF_000369725.1 PRJNA224116 SAMN01828131 APRX00000000.1 na 1144662 1144662 Acinetobacter sp. CIP 101966 strain=CIP 101966 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_101966_V1 Broad Institute GCA_000369725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/725/GCF_000369725.1_Acin_sp_CIP_101966_V1/ na na na haploid bacteria 3528462 3485835 43.000000 0 18 50 NCBI RefSeq GCF_000369725.1-RS_2025_02_16 2025-02-16 3455 3216 92 na GCF_000369745.1 PRJNA224116 SAMN01828130 APRY00000000.1 na 1144673 1144673 Acinetobacter sp. CIP 64.7 strain=CIP 64.7 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_64_7_V1 Broad Institute GCA_000369745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/745/GCF_000369745.1_Acin_sp_CIP_64_7_V1/ na na na haploid bacteria 3657789 3608282 43.000000 0 19 59 NCBI RefSeq GCF_000369745.1-RS_2025_02_17 2025-02-17 3630 3346 102 na GCF_000369765.1 PRJNA224116 SAMN01087859 APRZ00000000.1 na 280145 280145 Acinetobacter colistiniresistens strain=NIPH 1859 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_1859_V1 Broad Institute GCA_000369765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/765/GCF_000369765.1_Acin_sp_NIPH_1859_V1/ na na na haploid bacteria 4223296 4197127 41.500000 0 8 26 NCBI RefSeq GCF_000369765.1-RS_2025_12_23 2025-12-23 4001 3821 104 na GCF_000369805.1 PRJNA224116 SAMN01828129 APSB00000000.1 na 1217708 1217708 Acinetobacter sp. NIPH 2100 strain=NIPH 2100 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_2100_V1 Broad Institute GCA_000369805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/805/GCF_000369805.1_Acin_sp_NIPH_2100_V1/ na na na haploid bacteria 3929510 3875794 41.000000 0 1 22 NCBI RefSeq GCF_000369805.1-RS_2025_02_19 2025-02-19 3658 3524 95 na GCF_000369825.1 PRJNA224116 SAMN01828128 APSC00000000.1 na 1217688 1217688 Acinetobacter sp. NIPH 542 strain=NIPH 542 na latest Scaffold Major Full 2013-04-19 Acin_sp_NIPH_542_V1 Broad Institute GCA_000369825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/825/GCF_000369825.1_Acin_sp_NIPH_542_V1/ na na na haploid bacteria 4176391 4174669 39.000000 0 8 13 NCBI RefSeq GCF_000369825.1-RS_2025_02_19 2025-02-19 3953 3812 92 na GCF_000369845.1 PRJNA224116 SAMN01087865 APSD00000000.1 reference genome 70347 70347 Acinetobacter higginsii strain=ANC 3880 na latest Scaffold Major Full 2013-04-19 Acin_sp_ANC_3880_V1 Broad Institute GCA_000369845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/845/GCF_000369845.1_Acin_sp_ANC_3880_V1/ na na na haploid bacteria 4374226 4298248 41.000000 0 14 37 NCBI RefSeq GCF_000369845.1-RS_2025_12_10 2025-12-10 4087 3936 81 na GCF_000369865.1 PRJNA224116 SAMN01828127 APSE00000000.1 na 1144666 1144666 Acinetobacter sp. CIP 102143 strain=CIP 102143 na latest Scaffold Major Full 2013-04-19 Acin_sp_CIP_102143_V1 Broad Institute GCA_000369865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/865/GCF_000369865.1_Acin_sp_CIP_102143_V1/ na na na haploid bacteria 3025070 2964850 41.500000 0 26 96 NCBI RefSeq GCF_000369865.1-RS_2025_02_19 2025-02-19 3006 2648 87 na GCF_000369885.1 PRJNA224116 SAMN01087838 APQB00000000.1 reference genome 1217716 108980 Acinetobacter ursingii NIPH 706 strain=NIPH 706 na latest Scaffold Major Full 2013-04-19 Acin_ursi_NIPH_706_V1 Broad Institute GCA_000369885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/885/GCF_000369885.1_Acin_ursi_NIPH_706_V1/ na na na haploid bacteria 3510045 3492350 40.000000 0 20 32 NCBI RefSeq GCF_000369885.1-RS_2025_12_10 2025-12-10 3377 3202 91 na GCF_000369905.1 PRJNA224116 SAMN00839717 AQIQ00000000.1 na 1169203 235 Brucella abortus 225/65 strain=225/65 na latest Scaffold Major Full 2013-04-19 Bruc_abor_225_65_V1 Broad Institute GCA_000369905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/905/GCF_000369905.1_Bruc_abor_225_65_V1/ na na na haploid bacteria 3273643 3271748 57.000000 0 3 6 NCBI RefSeq GCF_000369905.1-RS_2026_05_15 2026-05-15 3220 2982 58 na GCF_000369925.1 PRJNA224116 SAMN00839720 AQIR00000000.1 na 1169204 235 Brucella abortus 355/78 strain=355/78 na latest Scaffold Major Full 2013-04-19 Bruc_abor_355_78_V1 Broad Institute GCA_000369925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/925/GCF_000369925.1_Bruc_abor_355_78_V1/ na na na haploid bacteria 3302935 3300170 57.000000 0 4 8 NCBI RefSeq GCF_000369925.1-RS_2026_05_15 2026-05-15 3245 2994 86 na GCF_000369945.1 PRJNA224116 SAMN00839704 AQIS00000000.1 reference genome 1169205 235 Brucella abortus 544 strain=544 na latest Scaffold Major Full 2013-04-19 Bruc_abor_544_V1 Broad Institute GCA_000369945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/945/GCF_000369945.1_Bruc_abor_544_V1/ na assembly from type material na haploid bacteria 3296863 3289725 57.000000 0 3 10 NCBI RefSeq GCF_000369945.1-RS_2026_05_13 2026-05-13 3235 2981 74 na GCF_000369965.1 PRJNA224116 SAMN00839729 AQIT00000000.1 na 1169206 235 Brucella abortus 600/64 strain=600/64 na latest Scaffold Major Full 2013-04-19 Bruc_abor_600_64_V1 Broad Institute GCA_000369965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/965/GCF_000369965.1_Bruc_abor_600_64_V1/ na na na haploid bacteria 3315738 3311953 57.000000 0 5 12 NCBI RefSeq GCF_000369965.1-RS_2026_05_16 2026-05-16 3259 2991 86 na GCF_000369985.1 PRJNA224116 SAMN00839718 AQIU00000000.1 na 1169207 235 Brucella abortus 63/130 strain=63/130 na latest Scaffold Major Full 2013-04-19 Bruc_abor_63_130_V1 Broad Institute GCA_000369985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/369/985/GCF_000369985.1_Bruc_abor_63_130_V1/ na na na haploid bacteria 3304420 3298480 57.000000 0 4 13 NCBI RefSeq GCF_000369985.1-RS_2026_05_15 2026-05-15 3245 2984 85 na GCF_000370005.1 PRJNA224116 SAMN00839721 AQIV00000000.1 na 1169208 235 Brucella abortus 63/138 strain=63/138 na latest Scaffold Major Full 2013-04-19 Bruc_abor_63_138_V1 Broad Institute GCA_000370005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/005/GCF_000370005.1_Bruc_abor_63_138_V1/ na na na haploid bacteria 3297446 3295046 57.000000 0 5 9 NCBI RefSeq GCF_000370005.1-RS_2026_05_15 2026-05-15 3244 2995 81 na GCF_000370025.1 PRJNA224116 SAMN00839719 AQIW00000000.1 na 1169209 235 Brucella abortus 63/144 strain=63/144 na latest Scaffold Major Full 2013-04-19 Bruc_abor_63_144_V1 Broad Institute GCA_000370025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/025/GCF_000370025.1_Bruc_abor_63_144_V1/ na na na haploid bacteria 3284092 3281321 57.000000 0 4 7 NCBI RefSeq GCF_000370025.1-RS_2026_05_15 2026-05-15 3229 2995 67 na GCF_000370045.1 PRJNA224116 SAMN00811159 AQIX00000000.1 na 1160177 235 Brucella abortus 63/168 strain=63/168 na latest Scaffold Major Full 2013-04-19 Bruc_abor_63_168_V1 Broad Institute GCA_000370045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/045/GCF_000370045.1_Bruc_abor_63_168_V1/ na na na haploid bacteria 3287091 3286991 57.000000 0 10 11 NCBI RefSeq GCF_000370045.1-RS_2026_05_17 2026-05-17 3235 2985 68 na GCF_000370065.1 PRJNA224116 SAMN00811181 AQIY00000000.1 na 1160181 235 Brucella abortus 63/294 strain=63/294 na latest Scaffold Major Full 2013-04-19 Bruc_abor_63_294_V1 Broad Institute GCA_000370065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/065/GCF_000370065.1_Bruc_abor_63_294_V1/ na na na haploid bacteria 3285630 3285530 57.000000 0 32 33 NCBI RefSeq GCF_000370065.1-RS_2026_05_18 2026-05-18 3245 2954 77 na GCF_000370085.1 PRJNA224116 SAMN00811203 AQIZ00000000.1 na 1160199 235 Brucella abortus 64/108 strain=64/108 na latest Scaffold Major Full 2013-04-19 Bruc_abor_64_108_V1 Broad Institute GCA_000370085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/085/GCF_000370085.1_Bruc_abor_64_108_V1/ na na na haploid bacteria 3287431 3286766 57.000000 0 2 3 NCBI RefSeq GCF_000370085.1-RS_2026_05_14 2026-05-14 3231 2990 68 na GCF_000370105.1 PRJNA224116 SAMN00839705 AQJA00000000.1 na 1169210 235 Brucella abortus 64/81 strain=64/81 na latest Scaffold Major Full 2013-04-19 Bruc_abor_64_81_V1 Broad Institute GCA_000370105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/105/GCF_000370105.1_Bruc_abor_64_81_V1/ na na na haploid bacteria 3294944 3288750 57.000000 0 3 11 NCBI RefSeq GCF_000370105.1-RS_2026_05_15 2026-05-15 3235 2978 75 na GCF_000370125.1 PRJNA224116 SAMN00811236 AQJB00000000.1 na 1160200 235 Brucella abortus 65/157 strain=65/157 na latest Scaffold Major Full 2013-04-19 Bruc_abor_65_157_V1 Broad Institute GCA_000370125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/125/GCF_000370125.1_Bruc_abor_65_157_V1/ na na na haploid bacteria 3278954 3278854 57.000000 0 6 7 NCBI RefSeq GCF_000370125.1-RS_2026_05_15 2026-05-15 3227 2989 68 na GCF_000370145.1 PRJNA224116 SAMN00839706 AQJC00000000.1 na 1169211 235 Brucella abortus 65/63 strain=65/63 na latest Scaffold Major Full 2013-04-19 Bruc_abor_65_63_V1 Broad Institute GCA_000370145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/145/GCF_000370145.1_Bruc_abor_65_63_V1/ na na na haploid bacteria 3293789 3289609 57.000000 0 7 12 NCBI RefSeq GCF_000370145.1-RS_2026_05_17 2026-05-17 3249 2992 74 na GCF_000370165.1 PRJNA224116 SAMN00839710 AQJD00000000.1 na 1169212 235 Brucella abortus 67/93 strain=67/93 na latest Scaffold Major Full 2013-04-19 Bruc_abor_67_93_V1 Broad Institute GCA_000370165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/165/GCF_000370165.1_Bruc_abor_67_93_V1/ na na na haploid bacteria 3307750 3303572 57.000000 0 5 10 NCBI RefSeq GCF_000370165.1-RS_2026_05_15 2026-05-15 3253 2993 85 na GCF_000370185.1 PRJNA224116 SAMN00839723 AQJE00000000.1 na 1169213 235 Brucella abortus 78/14 strain=78/14 na latest Scaffold Major Full 2013-04-19 Bruc_abor_78_14_V1 Broad Institute GCA_000370185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/185/GCF_000370185.1_Bruc_abor_78_14_V1/ na na na haploid bacteria 3288055 3286059 57.000000 0 5 8 NCBI RefSeq GCF_000370185.1-RS_2026_05_15 2026-05-15 3229 2992 65 na GCF_000370205.1 PRJNA224116 SAMN01047749 AQJF00000000.1 na 1198698 235 Brucella abortus 78/32 strain=78/32 na latest Scaffold Major Full 2013-04-19 Bruc_abor_78_32_V1 Broad Institute GCA_000370205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/205/GCF_000370205.1_Bruc_abor_78_32_V1/ na na na haploid bacteria 3282227 3281782 57.000000 0 9 10 NCBI RefSeq GCF_000370205.1-RS_2026_05_17 2026-05-17 3232 2982 67 na GCF_000370225.1 PRJNA224116 SAMN00811161 AQJG00000000.1 na 1160185 235 Brucella abortus 80/101 strain=80/101 na latest Scaffold Major Full 2013-04-19 Bruc_abor_80_101_V1 Broad Institute GCA_000370225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/225/GCF_000370225.1_Bruc_abor_80_101_V1/ na na na haploid bacteria 3278730 3278530 57.000000 0 8 10 NCBI RefSeq GCF_000370225.1-RS_2026_05_15 2026-05-15 3219 2977 67 na GCF_000370245.1 PRJNA224116 SAMN00839700 AQJH00000000.1 na 1169214 235 Brucella abortus 80/28 strain=80/28 na latest Scaffold Major Full 2013-04-19 Bruc_abor_80_28_V1 Broad Institute GCA_000370245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/245/GCF_000370245.1_Bruc_abor_80_28_V1/ na na na haploid bacteria 3293675 3290548 57.000000 0 4 9 NCBI RefSeq GCF_000370245.1-RS_2026_05_17 2026-05-17 3232 2979 71 na GCF_000370265.1 PRJNA224116 SAMN00839698 AQJI00000000.1 na 1169215 235 Brucella abortus 84/26 strain=84/26 na latest Scaffold Major Full 2013-04-19 Bruc_abor_84_26_V1 Broad Institute GCA_000370265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/265/GCF_000370265.1_Bruc_abor_84_26_V1/ na na na haploid bacteria 3305799 3302433 57.000000 0 4 10 NCBI RefSeq GCF_000370265.1-RS_2026_05_16 2026-05-16 3249 2983 86 na GCF_000370285.1 PRJNA224116 SAMN00811165 AQJJ00000000.1 na 1160179 235 Brucella abortus 85/69 strain=85/69 na latest Scaffold Major Full 2013-04-19 Bruc_abor_85_69_V1 Broad Institute GCA_000370285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/285/GCF_000370285.1_Bruc_abor_85_69_V1/ na na na haploid bacteria 3275083 3274983 57.000000 0 6 7 NCBI RefSeq GCF_000370285.1-RS_2026_05_17 2026-05-17 3227 2979 68 na GCF_000370305.1 PRJNA224116 SAMN00839701 AQJK00000000.1 na 1169216 235 Brucella abortus 87/28 strain=87/28 na latest Scaffold Major Full 2013-04-19 Bruc_abor_87_28_V1 Broad Institute GCA_000370305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/305/GCF_000370305.1_Bruc_abor_87_28_V1/ na na na haploid bacteria 3303778 3302321 57.000000 0 5 7 NCBI RefSeq GCF_000370305.1-RS_2026_05_15 2026-05-15 3241 2996 71 na GCF_000370325.1 PRJNA224116 SAMN00811167 AQJL00000000.1 na 1160206 235 Brucella abortus 877/67 strain=877/67 na latest Scaffold Major Full 2013-04-19 Bruc_abor_877_67_V1 Broad Institute GCA_000370325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/325/GCF_000370325.1_Bruc_abor_877_67_V1/ na na na haploid bacteria 3278582 3278482 57.000000 0 9 10 NCBI RefSeq GCF_000370325.1-RS_2026_05_15 2026-05-15 3235 2999 68 na GCF_000370345.1 PRJNA224116 SAMN01047748 AQJM00000000.1 na 1198697 235 Brucella abortus 88/217 strain=88/217 na latest Scaffold Major Full 2013-04-19 Bruc_abor_88_217_V1 Broad Institute GCA_000370345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/345/GCF_000370345.1_Bruc_abor_88_217_V1/ na na na haploid bacteria 3271247 3270687 57.000000 0 10 11 NCBI RefSeq GCF_000370345.1-RS_2026_05_17 2026-05-17 3214 2944 66 na GCF_000370365.1 PRJNA224116 SAMN00839722 AQJN00000000.1 na 1169218 235 Brucella abortus F1/06-B21 strain=F1/06-B21 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F1_06-B21_V1 Broad Institute GCA_000370365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/365/GCF_000370365.1_Bruc_abor_F1_06-B21_V1/ na na na haploid bacteria 3303558 3300859 57.000000 0 4 11 NCBI RefSeq GCF_000370365.1-RS_2026_05_16 2026-05-16 3242 2985 76 na GCF_000370385.1 PRJNA224116 SAMN00839699 AQJO00000000.1 na 1169219 235 Brucella abortus F10/05-11 strain=F10/05-11 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F10_05-11_V1 Broad Institute GCA_000370385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/385/GCF_000370385.1_Bruc_abor_F10_05-11_V1/ na na na haploid bacteria 3292824 3289520 57.000000 0 4 10 NCBI RefSeq GCF_000370385.1-RS_2026_05_17 2026-05-17 3238 2977 76 na GCF_000370405.1 PRJNA224116 SAMN00839709 AQJP00000000.1 na 1169220 235 Brucella abortus F10/06-3 strain=F10/06-3 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F10_06-3_V1 Broad Institute GCA_000370405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/405/GCF_000370405.1_Bruc_abor_F10_06-3_V1/ na na na haploid bacteria 3286840 3283592 57.000000 0 5 11 NCBI RefSeq GCF_000370405.1-RS_2026_05_17 2026-05-17 3225 2963 79 na GCF_000370425.1 PRJNA224116 SAMN00811177 AQJQ00000000.1 na 1160202 235 Brucella abortus F5/04-7 strain=F5/04-7 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F5_04-7_V1 Broad Institute GCA_000370425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/425/GCF_000370425.1_Bruc_abor_F5_04-7_V1/ na na na haploid bacteria 3279933 3279278 57.000000 0 8 10 NCBI RefSeq GCF_000370425.1-RS_2026_05_15 2026-05-15 3229 2988 68 na GCF_000370445.1 PRJNA224116 SAMN00811179 AQJR00000000.1 na 1160207 235 Brucella abortus F6/05-3 strain=F6/05-3 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F6_05-3_V1 Broad Institute GCA_000370445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/445/GCF_000370445.1_Bruc_abor_F6_05-3_V1/ na na na haploid bacteria 3278987 3278887 57.000000 0 13 14 NCBI RefSeq GCF_000370445.1-RS_2026_05_16 2026-05-16 3220 2977 67 na GCF_000370465.1 PRJNA224116 SAMN00811180 AQJS00000000.1 na 1160188 235 Brucella abortus F6/05-4 strain=F6/05-4 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F6_05-4_V1 Broad Institute GCA_000370465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/465/GCF_000370465.1_Bruc_abor_F6_05-4_V1/ na na na haploid bacteria 3280699 3280599 57.000000 0 13 14 NCBI RefSeq GCF_000370465.1-RS_2026_05_15 2026-05-15 3231 2994 68 na GCF_000370485.1 PRJNA224116 SAMN00811182 AQJT00000000.1 na 1160208 235 Brucella abortus F6/05-9 strain=F6/05-9 na latest Scaffold Major Full 2013-04-19 Bruc_abor_F6_05-9_V1 Broad Institute GCA_000370485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/485/GCF_000370485.1_Bruc_abor_F6_05-9_V1/ na na na haploid bacteria 3280952 3280852 57.000000 0 13 14 NCBI RefSeq GCF_000370485.1-RS_2026_05_15 2026-05-15 3222 2984 67 na GCF_000370505.1 PRJNA224116 SAMN00811188 AQJU00000000.1 na 1160165 235 Brucella abortus NI352 strain=NI352 na latest Scaffold Major Full 2013-04-19 Bruc_abor_NI352_V1 Broad Institute GCA_000370505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/505/GCF_000370505.1_Bruc_abor_NI352_V1/ na na na haploid bacteria 3286581 3286481 57.000000 0 4 5 NCBI RefSeq GCF_000370505.1-RS_2026_05_16 2026-05-16 3232 2985 68 na GCF_000370525.1 PRJNA224116 SAMN00811191 AQJV00000000.1 na 1160168 235 Brucella abortus NI422 strain=NI422 na latest Scaffold Major Full 2013-04-19 Bruc_abor_NI422_V1 Broad Institute GCA_000370525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/525/GCF_000370525.1_Bruc_abor_NI422_V1/ na na na haploid bacteria 3286304 3286204 57.000000 0 4 5 NCBI RefSeq GCF_000370525.1-RS_2026_05_16 2026-05-16 3231 2985 68 na GCF_000370545.1 PRJNA224116 SAMN00811194 AQJW00000000.1 na 1160170 235 Brucella abortus NI495a strain=NI495a na latest Scaffold Major Full 2013-04-19 Bruc_abor_NI495a_V1 Broad Institute GCA_000370545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/545/GCF_000370545.1_Bruc_abor_NI495a_V1/ na na na haploid bacteria 3286963 3286723 57.000000 0 4 6 NCBI RefSeq GCF_000370545.1-RS_2026_05_16 2026-05-16 3231 2984 68 na GCF_000370565.1 PRJNA224116 SAMN00839707 AQJX00000000.1 na 1169221 235 Brucella abortus R42-08 strain=R42-08 na latest Scaffold Major Full 2013-04-19 Bruc_abor_R42-08_V1 Broad Institute GCA_000370565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/565/GCF_000370565.1_Bruc_abor_R42-08_V1/ na na na haploid bacteria 3291715 3287838 57.000000 0 4 10 NCBI RefSeq GCF_000370565.1-RS_2026_05_16 2026-05-16 3237 2973 86 na GCF_000370585.1 PRJNA224116 SAMN00839703 AQJY00000000.1 na 1169222 36855 Brucella canis 79/122 strain=79/122 na latest Scaffold Major Full 2013-04-19 Bruc_cani_79_122_V1 Broad Institute GCA_000370585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/585/GCF_000370585.1_Bruc_cani_79_122_V1/ na na na haploid bacteria 3289630 3278830 57.000000 0 3 5 NCBI RefSeq GCF_000370585.1-RS_2025_08_08 2025-08-08 3200 2984 68 na GCF_000370605.1 PRJNA224116 SAMN01047736 AQJZ00000000.1 na 1198685 36855 Brucella canis CNGB 513 strain=CNGB 513 na latest Scaffold Major Full 2013-04-19 Bruc_cani_CNGB_513_V1 Broad Institute GCA_000370605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/605/GCF_000370605.1_Bruc_cani_CNGB_513_V1/ na na na haploid bacteria 3314031 3313916 57.000000 0 6 7 NCBI RefSeq GCF_000370605.1-RS_2025_08_08 2025-08-08 3225 3015 68 na GCF_000370625.1 PRJNA224116 SAMN00839732 AQKA00000000.1 na 1169223 29459 Brucella melitensis BG2 (S27) strain=BG2 (S27) na latest Scaffold Major Full 2013-04-19 Bruc_meli_BG2_S27_V1 Broad Institute GCA_000370625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/625/GCF_000370625.1_Bruc_meli_BG2_S27_V1/ na na na haploid bacteria 3297780 3297500 57.000000 0 10 11 NCBI RefSeq GCF_000370625.1-RS_2026_04_20 2026-04-20 3237 3007 62 na GCF_000370645.1 PRJNA224116 SAMN00811208 AQKB00000000.1 na 1160219 29459 Brucella melitensis F1/06 B10 strain=F1/06 B10 na latest Scaffold Major Full 2013-04-19 Bruc_meli_F1_06_B10_V1 Broad Institute GCA_000370645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/645/GCF_000370645.1_Bruc_meli_F1_06_B10_V1/ na na na haploid bacteria 3296860 3296085 57.000000 0 9 10 NCBI RefSeq GCF_000370645.1-RS_2026_04_25 2026-04-25 3244 2997 63 na GCF_000370665.1 PRJNA224116 SAMN00839697 AQKC00000000.1 na 1169224 29459 Brucella melitensis F10/06-16 strain=F10/06-16 na latest Scaffold Major Full 2013-04-19 Bruc_meli_F10_06-16_V1 Broad Institute GCA_000370665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/665/GCF_000370665.1_Bruc_meli_F10_06-16_V1/ na na na haploid bacteria 3298896 3297546 57.000000 0 3 5 NCBI RefSeq GCF_000370665.1-RS_2026_04_04 2026-04-04 3236 3020 58 na GCF_000370685.1 PRJNA224116 SAMN00811213 AQKD00000000.1 na 1160225 29459 Brucella melitensis F8/01-155 strain=F8/01-155 na latest Scaffold Major Full 2013-04-19 Bruc_meli_F8_01-155_V1 Broad Institute GCA_000370685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/685/GCF_000370685.1_Bruc_meli_F8_01-155_V1/ na na na haploid bacteria 3299548 3299448 57.000000 0 11 12 NCBI RefSeq GCF_000370685.1-RS_2026_04_18 2026-04-18 3240 3014 63 na GCF_000370705.1 PRJNA224116 SAMN00839730 AQKE00000000.1 na 1169226 29459 Brucella melitensis F9/05 strain=F9/05 na latest Scaffold Major Full 2013-04-19 Bruc_meli_F9_05_V1 Broad Institute GCA_000370705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/705/GCF_000370705.1_Bruc_meli_F9_05_V1/ na na na haploid bacteria 3299419 3299164 57.000000 0 12 13 NCBI RefSeq GCF_000370705.1-RS_2026_04_19 2026-04-19 3242 3012 63 na GCF_000370725.1 PRJNA224116 SAMN00811216 AQKF00000000.1 na 1160217 29459 Brucella melitensis UK14/06 strain=UK14/06 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK14_06_V1 Broad Institute GCA_000370725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/725/GCF_000370725.1_Bruc_meli_UK14_06_V1/ na na na haploid bacteria 3295672 3295572 57.000000 0 7 8 NCBI RefSeq GCF_000370725.1-RS_2026_04_24 2026-04-24 3240 2998 63 na GCF_000370745.1 PRJNA224116 SAMN00811218 AQKG00000000.1 na 1160214 29459 Brucella melitensis UK22/04 strain=UK22/04 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK22_04_V1 Broad Institute GCA_000370745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/745/GCF_000370745.1_Bruc_meli_UK22_04_V1/ na na na haploid bacteria 3322387 3322247 57.000000 0 36 37 NCBI RefSeq GCF_000370745.1-RS_2026_06_01 2026-06-01 3275 3009 79 na GCF_000370765.1 PRJNA224116 SAMN00811220 AQKH00000000.1 na 1160213 29459 Brucella melitensis UK23/06 strain=UK23/06 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK23_06_V1 Broad Institute GCA_000370765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/765/GCF_000370765.1_Bruc_meli_UK23_06_V1/ na na na haploid bacteria 3295911 3295811 57.000000 0 6 7 NCBI RefSeq GCF_000370765.1-RS_2026_04_25 2026-04-25 3238 2995 63 na GCF_000370785.1 PRJNA224116 SAMN00811221 AQKI00000000.1 na 1160222 29459 Brucella melitensis Uk24/06 strain=Uk24/06 na latest Scaffold Major Full 2013-04-19 Bruc_meli_Uk24_06_V1 Broad Institute GCA_000370785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/785/GCF_000370785.1_Bruc_meli_Uk24_06_V1/ na na na haploid bacteria 3295037 3294937 57.000000 0 7 8 NCBI RefSeq GCF_000370785.1-RS_2026_04_24 2026-04-24 3239 3000 62 na GCF_000370805.1 PRJNA224116 SAMN00839702 AQKJ00000000.1 na 1169227 29459 Brucella melitensis UK29/05 strain=UK29/05 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK29_05_V1 Broad Institute GCA_000370805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/805/GCF_000370805.1_Bruc_meli_UK29_05_V1/ na na na haploid bacteria 3307170 3306770 57.000000 0 3 6 NCBI RefSeq GCF_000370805.1-RS_2026_04_04 2026-04-04 3247 3030 59 na GCF_000370825.1 PRJNA224116 SAMN00839724 AQKK00000000.1 na 1169228 29459 Brucella melitensis UK3/06 strain=UK3/06 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK3_06_V1 Broad Institute GCA_000370825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/825/GCF_000370825.1_Bruc_meli_UK3_06_V1/ na na na haploid bacteria 3310006 3305051 57.000000 0 3 7 NCBI RefSeq GCF_000370825.1-RS_2026_04_05 2026-04-05 3249 3028 58 na GCF_000370845.1 PRJNA224116 SAMN00839711 AQKL00000000.1 na 1169229 29459 Brucella melitensis UK31/99 strain=UK31/99 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK31_99_V1 Broad Institute GCA_000370845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/845/GCF_000370845.1_Bruc_meli_UK31_99_V1/ na na na haploid bacteria 3323800 3322249 57.000000 0 4 10 NCBI RefSeq GCF_000370845.1-RS_2026_05_31 2026-05-31 3257 2986 78 na GCF_000370865.1 PRJNA224116 SAMN00811222 AQKM00000000.1 na 1160216 29459 Brucella melitensis UK37/05 strain=UK37/05 na latest Scaffold Major Full 2013-04-19 Bruc_meli_UK37_05_V1 Broad Institute GCA_000370865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/865/GCF_000370865.1_Bruc_meli_UK37_05_V1/ na na na haploid bacteria 3301172 3301072 57.000000 0 10 11 NCBI RefSeq GCF_000370865.1-RS_2026_04_18 2026-04-18 3244 3017 64 na GCF_000370885.1 PRJNA224116 SAMN00839726 AQKN00000000.1 na 1169230 236 Brucella ovis 63/96 strain=63/96 na latest Scaffold Major Full 2013-04-19 Bruc_ovis_63_96_V1 Broad Institute GCA_000370885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/885/GCF_000370885.1_Bruc_ovis_63_96_V1/ na na na haploid bacteria 3279023 3272561 57.000000 0 3 13 NCBI RefSeq GCF_000370885.1-RS_2026_05_13 2026-05-13 3226 2829 68 na GCF_000370905.1 PRJNA224116 SAMN00839736 AQKO00000000.1 na 1169232 236 Brucella ovis 81/8 strain=81/8 na latest Scaffold Major Full 2013-04-19 Bruc_ovis_81_8_V1 Broad Institute GCA_000370905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/905/GCF_000370905.1_Bruc_ovis_81_8_V1/ na na na haploid bacteria 3300454 3300444 57.000000 0 24 25 NCBI RefSeq GCF_000370905.1-RS_2026_05_13 2026-05-13 3252 2838 83 na GCF_000370925.1 PRJNA224116 SAMN00839716 AQKP00000000.1 na 1169234 1169234 Brucella sp. 56/94 strain=56/94 na latest Scaffold Major Full 2013-04-19 Bruc_sp_56_94_V1 Broad Institute GCA_000370925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/925/GCF_000370925.1_Bruc_sp_56_94_V1/ na na na haploid bacteria 3324827 3316300 57.500000 0 4 23 NCBI RefSeq GCF_000370925.1-RS_2024_08_22 2024-08-22 3249 3031 79 na GCF_000370945.1 PRJNA224116 SAMN00811223 AQKQ00000000.1 na 1160235 1160235 Brucella sp. 63/311 strain=63/311 na latest Scaffold Major Full 2013-04-19 Bruc_sp_63_311_V1 Broad Institute GCA_000370945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/945/GCF_000370945.1_Bruc_sp_63_311_V1/ na na na haploid bacteria 3353781 3352940 57.000000 0 19 21 NCBI RefSeq GCF_000370945.1-RS_2024_07_31 2024-07-31 3284 3037 69 na GCF_000370965.1 PRJNA224116 SAMN01047751 AQKR00000000.1 na 437670 437670 Brucella sp. F23/97 strain=F23/97 na latest Scaffold Major Full 2013-04-19 Bruc_sp_F23_97_V1 Broad Institute GCA_000370965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/965/GCF_000370965.1_Bruc_sp_F23_97_V1/ na na na haploid bacteria 3312508 3311568 57.500000 0 56 59 NCBI RefSeq GCF_000370965.1-RS_2024_08_22 2024-08-22 3236 2999 69 na GCF_000370985.1 PRJNA224116 SAMN00839728 AQKS00000000.1 na 1169233 1169233 Brucella sp. F5/06 strain=F5/06 na latest Scaffold Major Full 2013-04-19 Bruc_sp_F5_06_V1 Broad Institute GCA_000370985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/370/985/GCF_000370985.1_Bruc_sp_F5_06_V1/ na na na haploid bacteria 3360293 3347503 57.000000 0 4 20 NCBI RefSeq GCF_000370985.1-RS_2024_08_21 2024-08-21 3293 3020 85 na GCF_000371005.1 PRJNA224116 SAMN00811224 AQKT00000000.1 na 437687 437687 Brucella sp. F8/99 strain=F8/99 na latest Scaffold Major Full 2013-04-19 Bruc_sp_F8_99_V1 Broad Institute GCA_000371005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/005/GCF_000371005.1_Bruc_sp_F8_99_V1/ na na na haploid bacteria 3313861 3313336 57.000000 0 33 34 NCBI RefSeq GCF_000371005.1-RS_2024_08_22 2024-08-22 3240 3045 68 na GCF_000371025.1 PRJNA224116 SAMN00839725 AQKU00000000.1 na 437671 437671 Brucella sp. F96/2 strain=F96/2 na latest Scaffold Major Full 2013-04-19 Bruc_sp_F96_2_V1 Broad Institute GCA_000371025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/025/GCF_000371025.1_Bruc_sp_F96_2_V1/ na na na haploid bacteria 3361076 3340509 57.000000 0 7 36 NCBI RefSeq GCF_000371025.1-RS_2024_07_31 2024-07-31 3304 3038 85 na GCF_000371045.1 PRJNA224116 SAMN00811226 AQKV00000000.1 na 437663 437663 Brucella sp. UK1/97 strain=UK1/97 na latest Scaffold Major Full 2013-04-19 Bruc_sp_UK1_97_V1 Broad Institute GCA_000371045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/045/GCF_000371045.1_Bruc_sp_UK1_97_V1/ na na na haploid bacteria 3307641 3307541 57.500000 0 54 55 NCBI RefSeq GCF_000371045.1-RS_2024_07_31 2024-07-31 3229 3001 67 na GCF_000371065.1 PRJNA224116 SAMN00811228 AQKW00000000.1 na 437684 437684 Brucella sp. UK40/99 strain=UK40/99 na latest Scaffold Major Full 2013-04-19 Bruc_sp_UK40_99_V1 Broad Institute GCA_000371065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/065/GCF_000371065.1_Bruc_sp_UK40_99_V1/ na na na haploid bacteria 3376429 3376329 57.000000 0 42 43 NCBI RefSeq GCF_000371065.1-RS_2024_08_22 2024-08-22 3311 3090 70 na GCF_000371085.1 PRJNA224116 SAMN00839712 AQKX00000000.1 na 1170703 29461 Brucella suis 01-5744 strain=01-5744 na latest Scaffold Major Full 2013-04-19 Bruc_suis_01-5744_V1 Broad Institute GCA_000371085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/085/GCF_000371085.1_Bruc_suis_01-5744_V1/ na na na haploid bacteria 3311044 3306819 57.500000 0 6 13 NCBI RefSeq GCF_000371085.1-RS_2025_08_08 2025-08-08 3227 3025 65 na GCF_000371105.1 PRJNA224116 SAMN00811230 AQKY00000000.1 na 1160227 29461 Brucella suis 63/198 strain=63/198 na latest Scaffold Major Full 2013-04-19 Bruc_suis_63_198_V1 Broad Institute GCA_000371105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/105/GCF_000371105.1_Bruc_suis_63_198_V1/ na na na haploid bacteria 3308133 3307963 57.500000 0 15 16 NCBI RefSeq GCF_000371105.1-RS_2025_08_08 2025-08-08 3223 3007 67 na GCF_000371125.1 PRJNA224116 SAMN00811232 AQKZ00000000.1 na 1160228 29461 Brucella suis 63/261 strain=63/261 na latest Scaffold Major Full 2013-04-19 Bruc_suis_63_261_V1 Broad Institute GCA_000371125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/125/GCF_000371125.1_Bruc_suis_63_261_V1/ na na na haploid bacteria 3321466 3320162 57.000000 0 7 10 NCBI RefSeq GCF_000371125.1-RS_2025_08_08 2025-08-08 3246 3008 62 na GCF_000371145.1 PRJNA224116 SAMN01047734 AQLA00000000.1 na 1198683 29461 Brucella suis CNGB 247 strain=CNGB 247 na latest Scaffold Major Full 2013-04-19 Bruc_suis_CNGB_247_V1 Broad Institute GCA_000371145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/145/GCF_000371145.1_Bruc_suis_CNGB_247_V1/ na na na haploid bacteria 3306601 3306444 57.500000 0 9 10 NCBI RefSeq GCF_000371145.1-RS_2025_08_08 2025-08-08 3226 3017 67 na GCF_000371165.1 PRJNA224116 SAMN00811235 AQLB00000000.1 na 1160229 29461 Brucella suis F12/02 strain=F12/02 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F12_02_V1 Broad Institute GCA_000371165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/165/GCF_000371165.1_Bruc_suis_F12_02_V1/ na na na haploid bacteria 3325040 3324940 57.000000 0 3 4 NCBI RefSeq GCF_000371165.1-RS_2025_08_08 2025-08-08 3247 3000 67 na GCF_000371185.1 PRJNA224116 SAMN00839713 AQIP00000000.1 na 1169236 29461 Brucella suis F5/05-10 strain=F5/5/2010 na latest Scaffold Major Full 2013-04-19 Bruc_suis_5_05-10_V1 Broad Institute GCA_000371185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/185/GCF_000371185.1_Bruc_suis_5_05-10_V1/ na na na haploid bacteria 3346445 3341215 57.000000 0 5 23 NCBI RefSeq GCF_000371185.1-RS_2025_08_05 2025-08-05 3272 3008 85 na GCF_000371205.1 PRJNA224116 SAMN00839696 AQLC00000000.1 na 1169238 29461 Brucella suis F5/05-4 strain=F5/05-4 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F5_05-4_V1 Broad Institute GCA_000371205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/205/GCF_000371205.1_Bruc_suis_F5_05-4_V1/ na na na haploid bacteria 3348941 3346731 57.000000 0 5 13 NCBI RefSeq GCF_000371205.1-RS_2025_08_08 2025-08-08 3270 3010 85 na GCF_000371225.1 PRJNA224116 SAMN00839727 AQLD00000000.1 na 1169239 29461 Brucella suis F7/06-1 strain=F7/06-1 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F7_06-1_V1 Broad Institute GCA_000371225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/225/GCF_000371225.1_Bruc_suis_F7_06-1_V1/ na na na haploid bacteria 3341187 3338310 57.000000 0 3 12 NCBI RefSeq GCF_000371225.1-RS_2025_08_08 2025-08-08 3259 3010 78 na GCF_000371245.1 PRJNA224116 SAMN00839715 AQLE00000000.1 na 1169240 29461 Brucella suis F7/06-2 strain=F7/06-2 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F7_06-2_V1 Broad Institute GCA_000371245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/245/GCF_000371245.1_Bruc_suis_F7_06-2_V1/ na na na haploid bacteria 3335960 3332107 57.000000 0 4 19 NCBI RefSeq GCF_000371245.1-RS_2025_08_08 2025-08-08 3261 3012 75 na GCF_000371265.1 PRJNA224116 SAMN00839714 AQLF00000000.1 na 1169241 29461 Brucella suis F7/06-5 strain=F7/06-5 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F7_06-5_V1 Broad Institute GCA_000371265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/265/GCF_000371265.1_Bruc_suis_F7_06-5_V1/ na na na haploid bacteria 3333083 3326192 57.000000 0 3 25 NCBI RefSeq GCF_000371265.1-RS_2025_08_08 2025-08-08 3267 3006 74 na GCF_000371285.1 PRJNA224116 SAMN00839734 AQLG00000000.1 na 1169242 29461 Brucella suis F8/06-1 strain=F8/06-1 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F8_06-1_V1 Broad Institute GCA_000371285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/285/GCF_000371285.1_Bruc_suis_F8_06-1_V1/ na na na haploid bacteria 3320904 3320884 57.000000 0 18 20 NCBI RefSeq GCF_000371285.1-RS_2025_08_08 2025-08-08 3257 3016 62 na GCF_000371305.1 PRJNA224116 SAMN00839695 AQLH00000000.1 na 1169243 29461 Brucella suis F8/06-3 strain=F8/06-3 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F8_06-3_V1 Broad Institute GCA_000371305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/305/GCF_000371305.1_Bruc_suis_F8_06-3_V1/ na na na haploid bacteria 3335164 3334399 57.000000 0 3 9 NCBI RefSeq GCF_000371305.1-RS_2025_08_08 2025-08-08 3262 3017 75 na GCF_000371325.1 PRJNA224116 SAMN00839735 AQLI00000000.1 na 1169244 29461 Brucella suis F9/06-1 strain=F9/06-1 na latest Scaffold Major Full 2013-04-19 Bruc_suis_F9_06-1_V1 Broad Institute GCA_000371325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/325/GCF_000371325.1_Bruc_suis_F9_06-1_V1/ na na na haploid bacteria 3321764 3321754 57.000000 0 20 21 NCBI RefSeq GCF_000371325.1-RS_2026_05_14 2026-05-14 3255 3019 62 na GCF_000371345.1 PRJNA224116 SAMN01921147 AQIH00000000.1 na 1293914 236 Brucella ovis IntaBari-2010-47-268 strain=IntaBari-2010-47-268 na latest Scaffold Major Full 2013-04-19 Bruc_ovis_IntaBari-2010-47-268_V1 Broad Institute GCA_000371345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/345/GCF_000371345.1_Bruc_ovis_IntaBari-2010-47-268_V1/ na na na haploid bacteria 3291421 3291346 57.000000 0 23 24 NCBI RefSeq GCF_000371345.1-RS_2026_05_13 2026-05-13 3244 2834 77 na GCF_000371385.1 PRJNA224116 SAMN02391502 AOUN00000000.1 na 1174684 1174684 Sphingopyxis sp. MC1 strain=MC1 na latest Contig Major Full 2013-04-19 Sphingopyxis sp. MC1 Aalborg University GCA_000371385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/385/GCF_000371385.1_Sphingopyxis_sp._MC1/ na na na haploid bacteria 3653464 3653464 65.000000 0 24 24 NCBI RefSeq GCF_000371385.1-RS_2025_08_25 2025-08-25 3596 3519 50 na GCF_000371405.1 PRJNA224116 SAMN02596769 AGYS00000000.1 na 999410 1531 [Clostridium] clostridioforme CM201 strain=CM201 na latest Scaffold Major Full 2013-04-19 Clos_clos_CM201_V1 Broad Institute GCA_000371405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/405/GCF_000371405.1_Clos_clos_CM201_V1/ na na na haploid bacteria 5655915 5586179 49.000000 0 7 47 NCBI RefSeq GCF_000371405.1-RS_2026_02_27 2026-02-27 5617 5316 95 na GCF_000371445.1 PRJNA224116 SAMN02596771 AGYU00000000.1 na 999412 154046 Hungatella hathewayi 12489931 strain=12489931 na latest Scaffold Major Full 2013-04-19 Clos_hath_12489931_V1 Broad Institute GCA_000371445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/445/GCF_000371445.1_Clos_hath_12489931_V1/ na na na haploid bacteria 6873024 6848759 49.500000 0 6 30 NCBI RefSeq GCF_000371445.1-RS_2025_06_23 2025-06-23 6034 5878 76 na GCF_000371465.1 PRJNA224116 SAMN02596770 AGYT00000000.1 reference genome 29372 29372 Clostridium thermobutyricum strain=209318 na latest Scaffold Major Full 2013-04-19 Clos_coli_209318_V1 Broad Institute GCA_000371465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/465/GCF_000371465.1_Clos_coli_209318_V1/ na na na haploid bacteria 3505620 3451798 26.000000 0 10 33 NCBI RefSeq GCF_000371465.1-RS_2026_04_14 2026-04-14 3367 3262 79 na GCF_000371485.1 PRJNA224116 SAMN02596765 AGYO00000000.1 na 999409 1531 [Clostridium] clostridioforme 90B1 strain=90B1 na latest Scaffold Major Full 2013-04-19 Clos_clos_90B1_V1 Broad Institute GCA_000371485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/485/GCF_000371485.1_Clos_clos_90B1_V1/ na na na haploid bacteria 5602152 5532763 49.000000 0 10 57 NCBI RefSeq GCF_000371485.1-RS_2026_02_28 2026-02-28 5462 5176 77 na GCF_000371505.1 PRJNA224116 SAMN02596768 AGYR00000000.1 na 999408 1531 [Clostridium] clostridioforme 90A8 strain=90A8 na latest Scaffold Major Full 2013-04-19 Clos_clos_90A8_V1 Broad Institute GCA_000371505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/505/GCF_000371505.1_Clos_clos_90A8_V1/ na na na haploid bacteria 5974284 5926779 49.000000 0 47 99 NCBI RefSeq GCF_000371505.1-RS_2026_02_28 2026-02-28 6009 5692 90 na GCF_000371545.1 PRJNA224116 SAMN02596762 AGYL00000000.1 na 999406 1531 [Clostridium] clostridioforme 90A6 strain=90A6 na latest Scaffold Major Full 2013-04-19 Clos_clos_90A6_V1 Broad Institute GCA_000371545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/545/GCF_000371545.1_Clos_clos_90A6_V1/ na na na haploid bacteria 6033914 5970004 48.500000 0 22 72 NCBI RefSeq GCF_000371545.1-RS_2026_02_28 2026-02-28 5999 5693 82 na GCF_000371565.1 PRJNA224116 SAMN02596763 AGYM00000000.1 na 999405 1531 [Clostridium] clostridioforme 90A4 strain=90A4 na latest Scaffold Major Full 2013-04-19 Clos_clos_90A4_V1 Broad Institute GCA_000371565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/565/GCF_000371565.1_Clos_clos_90A4_V1/ na na na haploid bacteria 5871489 5820140 48.500000 0 48 94 NCBI RefSeq GCF_000371565.1-RS_2026_02_28 2026-02-28 5867 5563 94 na GCF_000371585.1 PRJNA224116 SAMN02596767 AGYQ00000000.1 na 999404 1531 [Clostridium] clostridioforme 90A3 strain=90A3 na latest Scaffold Major Full 2013-04-19 Clos_clos_90A3_V1 Broad Institute GCA_000371585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/585/GCF_000371585.1_Clos_clos_90A3_V1/ na na na haploid bacteria 5549890 5466970 49.000000 0 11 58 NCBI RefSeq GCF_000371585.1-RS_2026_02_27 2026-02-27 5387 5097 84 na GCF_000371605.1 PRJNA224116 SAMN02596766 AGYP00000000.1 na 999403 1531 [Clostridium] clostridioforme 90A1 strain=90A1 na latest Scaffold Major Full 2013-04-19 Clos_clos_90A1_V1 Broad Institute GCA_000371605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/605/GCF_000371605.1_Clos_clos_90A1_V1/ na na na haploid bacteria 5806027 5768952 48.500000 0 16 47 NCBI RefSeq GCF_000371605.1-RS_2026_02_28 2026-02-28 5856 5570 87 na GCF_000371625.1 PRJNA224116 SAMN02596761 AGYK00000000.1 na 997898 1492 Clostridium butyricum 60E.3 strain=60E.3 na latest Scaffold Major Full 2013-04-19 Clos_buty_60E_3_V1 Broad Institute GCA_000371625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/625/GCF_000371625.1_Clos_buty_60E_3_V1/ na na na haploid bacteria 4644398 4618205 29.000000 0 10 30 NCBI RefSeq GCF_000371625.1-RS_2026_04_16 2026-04-16 4229 4098 87 na GCF_000371645.1 PRJNA224116 SAMN02596757 AGYG00000000.1 na 997897 208479 Enterocloster bolteae 90B8 strain=90B8 na latest Scaffold Major Full 2013-04-19 Clos_bolt_90B8_V1 Broad Institute GCA_000371645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/645/GCF_000371645.1_Clos_bolt_90B8_V1/ na na na haploid bacteria 6482686 6449191 48.500000 0 21 45 NCBI RefSeq GCF_000371645.1-RS_2026_02_27 2026-02-27 6074 5902 90 na GCF_000371665.1 PRJNA224116 SAMN02596756 AGYF00000000.1 na 997896 208479 Enterocloster bolteae 90B7 strain=90B7 na latest Scaffold Major Full 2013-04-19 Clos_bolt_90B7_V1 Broad Institute GCA_000371665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/665/GCF_000371665.1_Clos_bolt_90B7_V1/ na na na haploid bacteria 6439235 6397863 49.000000 0 19 54 NCBI RefSeq GCF_000371665.1-RS_2026_02_27 2026-02-27 5896 5743 80 na GCF_000371685.1 PRJNA224116 SAMN02596760 AGYJ00000000.1 na 997895 208479 Enterocloster bolteae 90B3 strain=90B3 na latest Scaffold Major Full 2013-04-19 Clos_bolt_90B3_V1 Broad Institute GCA_000371685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/685/GCF_000371685.1_Clos_bolt_90B3_V1/ na na na haploid bacteria 6538460 6479660 49.500000 0 4 25 NCBI RefSeq GCF_000371685.1-RS_2026_02_27 2026-02-27 6106 5970 94 na GCF_000371705.1 PRJNA224116 SAMN02596758 AGYH00000000.1 reference genome 997894 208479 Enterocloster bolteae 90A9 strain=90A9 na latest Scaffold Major Full 2013-04-19 Clos_bolt_90A9_V1 Broad Institute GCA_000371705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/705/GCF_000371705.1_Clos_bolt_90A9_V1/ na na na haploid bacteria 6377378 6367468 49.500000 0 1 18 NCBI RefSeq GCF_000371705.1-RS_2025_12_13 2025-12-13 5885 5760 91 na GCF_000371725.1 PRJNA224116 SAMN02596759 AGYI00000000.1 na 997893 208479 Enterocloster bolteae 90A5 strain=90A5 na latest Scaffold Major Full 2013-04-19 Clos_bolt_90A5_V1 Broad Institute GCA_000371725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/725/GCF_000371725.1_Clos_bolt_90A5_V1/ na na na haploid bacteria 6421395 6393729 49.000000 0 12 43 NCBI RefSeq GCF_000371725.1-RS_2026_02_27 2026-02-27 5855 5705 79 na GCF_000371765.1 PRJNA224116 SAMN02261306 AQUJ00000000.1 na 1090316 152682 Sphingomonas melonis C3 strain=C3 na latest Contig Major Full 2013-04-19 ASM37176v1 JGI GCA_000371765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/765/GCF_000371765.1_ASM37176v1/ na na na haploid bacteria 3929644 3929644 67.000000 0 4 4 NCBI RefSeq GCF_000371765.1-RS_2026_02_06 2026-02-06 3779 3679 59 na GCF_000371785.1 PRJNA224116 SAMN02261305 AQUI00000000.1 reference genome 1089546 1850 Actinopolyspora halophila DSM 43834 strain=DSM 43834 na latest Contig Major Full 2013-04-19 ASM37178v1 JGI GCA_000371785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/785/GCF_000371785.1_ASM37178v1/ na assembly from type material na haploid bacteria 5353291 5353291 68.000000 0 2 2 NCBI RefSeq GCF_000371785.1-RS_2026_05_02 2026-05-02 4908 4759 72 na GCF_000371805.1 PRJNA224116 SAMN02261307 AQUK00000000.1 reference genome 1069083 667126 Methanocaldococcus villosus KIN24-T80 strain=KIN24-T80 na latest Contig Major Full 2013-04-19 ASM37180v1 JGI GCA_000371805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/805/GCF_000371805.1_ASM37180v1/ na assembly from type material na haploid archaea 1249385 1249385 29.500000 0 2 2 NCBI RefSeq GCF_000371805.1-RS_2025_11_21 2025-11-21 1413 1357 45 na GCF_000371885.1 PRJNA224116 SAMN02261309 AQUL00000000.1 na 1068978 1814 Amycolatopsis methanolica 239 strain=239 na latest Contig Major Full 2013-04-19 ASM37188v1 JGI GCA_000371885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/885/GCF_000371885.1_ASM37188v1/ na assembly from type material na haploid bacteria 7196860 7196860 71.500000 0 2 2 NCBI RefSeq GCF_000371885.1-RS_2026_01_07 2026-01-07 7438 7064 63 na GCF_000371905.1 PRJNA224116 SAMN02261296 AQUD00000000.1 na 935549 384 Rhizobium leguminosarum bv. trifolii SRDI565 strain=SRDI565 na latest Contig Major Full 2013-04-19 ASM37190v1 JGI GCA_000371905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/905/GCF_000371905.1_ASM37190v1/ na na na haploid bacteria 6905599 6905599 60.500000 0 7 7 NCBI RefSeq GCF_000371905.1-RS_2025_06_10 2025-06-10 6696 6409 64 na GCF_000371925.1 PRJNA224116 SAMN02256490 AQVE00000000.1 reference genome 1123399 125614 Thiolinea disciformis DSM 14473 strain=DSM 14473 na latest Contig Major Full 2013-04-19 ASM37192v1 DOE Joint Genome Institute GCA_000371925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/925/GCF_000371925.1_ASM37192v1/ na assembly from type material na haploid bacteria 3923954 3923954 45.000000 0 71 71 NCBI RefSeq GCF_000371925.1-RS_2026_05_02 2026-05-02 3844 3763 59 na GCF_000371965.1 PRJNA224116 SAMN02261258 AQUO00000000.1 na 1101189 1101189 Paracoccus sp. N5 strain=N5 na latest Contig Major Full 2013-04-19 ASM37196v1 JGI GCA_000371965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/371/965/GCF_000371965.1_ASM37196v1/ na na na haploid bacteria 4354541 4354541 67.500000 0 3 3 NCBI RefSeq GCF_000371965.1-RS_2024_05_19 2024-05-19 4270 4099 65 na GCF_000372065.1 PRJNA224116 SAMN02256493 AQVB00000000.1 na 1122620 90245 Oligella urethralis DSM 7531 strain=DSM 7531 na latest Contig Major Full 2013-04-19 ASM37206v1 DOE Joint Genome Institute GCA_000372065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/065/GCF_000372065.1_ASM37206v1/ na assembly from type material na haploid bacteria 2311610 2311610 46.500000 0 46 46 NCBI RefSeq GCF_000372065.1-RS_2026_03_30 2026-03-30 2176 2099 43 na GCF_000372085.1 PRJNA224116 SAMN02256495 AQUV00000000.1 na 1121354 131081 Corynebacterium capitovis DSM 44611 strain=DSM 44611 na latest Contig Major Full 2013-04-19 ASM37208v1 DOE Joint Genome Institute GCA_000372085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/085/GCF_000372085.1_ASM37208v1/ na assembly from type material na haploid bacteria 1960866 1960866 64.500000 0 5 5 NCBI RefSeq GCF_000372085.1-RS_2026_05_02 2026-05-02 1915 1843 58 na GCF_000372105.1 PRJNA224116 SAMN02261326 AQUN00000000.1 na 935550 384 Rhizobium leguminosarum bv. trifolii SRDI943 strain=SRDI943 na latest Contig Major Full 2013-04-19 ASM37210v1 JGI GCA_000372105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/105/GCF_000372105.1_ASM37210v1/ na na na haploid bacteria 7412387 7412387 60.500000 0 5 5 NCBI RefSeq GCF_000372105.1-RS_2025_06_11 2025-06-11 7292 7025 66 na GCF_000372205.1 PRJNA224116 SAMN02261293 AQUC00000000.1 na 935553 384 Rhizobium leguminosarum bv. viciae TOM strain=TOM na latest Contig Major Full 2013-04-19 ASM37220v1 JGI GCA_000372205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/205/GCF_000372205.1_ASM37220v1/ na na na haploid bacteria 7357668 7357668 61.000000 0 6 6 NCBI RefSeq GCF_000372205.1-RS_2025_06_10 2025-06-10 7144 6859 64 na GCF_000372245.1 PRJNA224116 SAMN02256506 AQUX00000000.1 na 558173 1121358 Corynebacterium doosanense CAU 212 = DSM 45436 strain=DSM 45436 na latest Contig Major Full 2013-04-19 ASM37224v1 DOE Joint Genome Institute GCA_000372245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/245/GCF_000372245.1_ASM37224v1/ na assembly from type material na haploid bacteria 2647343 2647343 67.000000 0 41 41 NCBI RefSeq GCF_000372245.1-RS_2026_05_16 2026-05-16 2649 2534 60 na GCF_000372325.1 PRJNA224116 SAMN02256509 AQUT00000000.1 na 1056817 2426 Teredinibacter turnerae T8602 strain=T8602 na latest Contig Major Full 2013-04-19 ASM37232v1 DOE Joint Genome Institute GCA_000372325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/325/GCF_000372325.1_ASM37232v1/ na na na haploid bacteria 5097488 5097488 51.000000 0 59 59 NCBI RefSeq GCF_000372325.1-RS_2026_03_15 2026-03-15 4121 4040 48 na GCF_000372345.1 PRJNA224116 SAMN02256492 AQUS00000000.1 na 1041149 110321 Sinorhizobium medicae WSM1369 strain=WSM1369 na latest Contig Major Full 2013-04-19 ASM37234v1 DOE Joint Genome Institute GCA_000372345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/345/GCF_000372345.1_ASM37234v1/ na na na haploid bacteria 6402557 6402557 61.000000 0 307 307 NCBI RefSeq GCF_000372345.1-RS_2024_09_03 2024-09-03 6466 5728 55 na GCF_000372365.1 PRJNA224116 SAMN02256508 AQUU00000000.1 na 1120957 714 Aggregatibacter actinomycetemcomitans DSM 8324 strain=DSM 8324 na latest Contig Major Full 2013-04-19 ASM37236v1 DOE Joint Genome Institute GCA_000372365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/365/GCF_000372365.1_ASM37236v1/ na assembly from type material na haploid bacteria 2085887 2085887 44.500000 0 33 33 NCBI RefSeq GCF_000372365.1-RS_2026_01_15 2026-01-15 2113 1933 62 na GCF_000372385.1 PRJNA224116 SAMN02256507 AQUW00000000.1 na 1121356 227319 Corynebacterium ciconiae DSM 44920 strain=DSM 44920 na latest Contig Major Full 2013-04-19 ASM37238v1 DOE Joint Genome Institute GCA_000372385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/385/GCF_000372385.1_ASM37238v1/ na assembly from type material na haploid bacteria 2545566 2545566 62.000000 0 22 22 NCBI RefSeq GCF_000372385.1-RS_2026_04_23 2026-04-23 2248 2173 56 na GCF_000372405.1 PRJNA224116 SAMN02256491 AQVC00000000.1 na 1122975 322095 Porphyromonas somerae DSM 23386 strain=DSM 23386 na latest Contig Major Full 2013-04-19 ASM37240v1 DOE Joint Genome Institute GCA_000372405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/405/GCF_000372405.1_ASM37240v1/ na assembly from type material na haploid bacteria 2356678 2356678 47.000000 0 95 95 NCBI RefSeq GCF_000372405.1-RS_2025_12_02 2025-12-02 1975 1884 50 na GCF_000372425.1 PRJNA224116 SAMN02256504 AQVD00000000.1 na 1123303 1345 Streptococcus ferus DSM 20646 strain=DSM 20646 na latest Contig Major Full 2013-04-19 ASM37242v1 DOE Joint Genome Institute GCA_000372425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/425/GCF_000372425.1_ASM37242v1/ na assembly from type material na haploid bacteria 1847340 1847340 42.500000 0 12 12 NCBI RefSeq GCF_000372425.1-RS_2026_05_16 2026-05-16 1884 1790 54 na GCF_000372445.1 PRJNA224116 SAMN02256494 AQUY00000000.1 reference genome 1121370 487732 Corynebacterium ulceribovis DSM 45146 strain=DSM 45146 na latest Contig Major Full 2013-04-19 ASM37244v1 DOE Joint Genome Institute GCA_000372445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/445/GCF_000372445.1_ASM37244v1/ na assembly from type material na haploid bacteria 2300451 2300451 59.000000 0 8 8 NCBI RefSeq GCF_000372445.1-RS_2026_05_02 2026-05-02 2131 2066 53 na GCF_000372465.1 PRJNA224116 SAMN02256503 AQUZ00000000.1 reference genome 1122138 460086 Kribbella catacumbae DSM 19601 strain=DSM 19601 na latest Contig Major Full 2013-04-19 ASM37246v1 DOE Joint Genome Institute GCA_000372465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/465/GCF_000372465.1_ASM37246v1/ na assembly from type material na haploid bacteria 9627810 9627810 67.500000 0 152 152 NCBI RefSeq GCF_000372465.1-RS_2026_03_21 2026-03-21 9008 8821 64 na GCF_000372485.1 PRJNA224116 SAMN02256505 AQVA00000000.1 na 1122618 1247 Oenococcus oeni DSM 20252 = AWRIB129 strain=DSM 20252 na latest Contig Major Full 2013-04-19 ASM37248v1 DOE Joint Genome Institute GCA_000372485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/485/GCF_000372485.1_ASM37248v1/ na assembly from type material na haploid bacteria 1737581 1737581 38.000000 0 28 28 NCBI RefSeq GCF_000372485.1-RS_2026_03_17 2026-03-17 1809 1672 55 na GCF_000372525.1 PRJNA224116 SAMN02256497 AQUR00000000.1 na 1040979 1040979 Cupriavidus neocaledonicus strain=STM6070 na latest Contig Major Full 2013-04-19 ASM37252v1 DOE Joint Genome Institute GCA_000372525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/525/GCF_000372525.1_ASM37252v1/ na assembly from type material na haploid bacteria 6771773 6771773 67.000000 0 107 107 NCBI RefSeq GCF_000372525.1-RS_2026_03_31 2026-03-31 6247 6039 62 na GCF_000372545.3 PRJNA224116 SAMN02471435 AOMG00000000.2 na 1279011 1773 Mycobacterium tuberculosis PR05 strain=PR05 na latest Contig Minor Full 2013-04-30 MTB PR05 version 2 Universiti Teknologi MARA GCA_000372545.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/545/GCF_000372545.3_MTB_PR05_version_2/ na na na haploid bacteria 4314365 4314365 65.500000 0 224 224 NCBI RefSeq GCF_000372545.3-RS_2025_04_30 2025-04-30 4262 3866 51 23788553 GCF_000372565.1 PRJNA224116 SAMN02469777 AORN00000000.1 na 1279010 584 Proteus mirabilis PR03 strain=PR03 na latest Contig Major Full 2013-04-19 PM version 1 Universiti Teknologi MARA GCA_000372565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/565/GCF_000372565.1_PM_version_1/ na na na haploid bacteria 3847612 3847612 38.500000 0 99 99 NCBI RefSeq GCF_000372565.1-RS_2026_01_04 2026-01-04 3535 3420 59 23792750 GCF_000372585.2 PRJNA224116 SAMN02471432 na na 1279013 470 Acinetobacter baumannii PR07 strain=PR07 na latest Chromosome Major Full 2016-07-15 ASM37258v2 Universiti Teknologi MARA GCA_000372585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/585/GCF_000372585.2_ASM37258v2/ na na na haploid bacteria 3937175 3650738 39.000000 1 1 445 NCBI RefSeq GCF_000372585.2-RS_2026_01_21 2026-01-21 3579 3355 28 na GCF_000372605.1 PRJNA224116 SAMN02471433 AOSD00000000.1 na 1279012 1311 Streptococcus agalactiae PR06 strain=PR06 na latest Contig Major Full 2013-04-19 SA version 1 Universiti Teknologi MARA GCA_000372605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/605/GCF_000372605.1_SA_version_1/ na na na haploid bacteria 2120750 2120750 35.500000 0 67 67 NCBI RefSeq GCF_000372605.1-RS_2026_03_28 2026-03-28 2183 2065 41 23766409 GCF_000372645.1 PRJNA224116 SAMN02470743 APMP00000000.1 na 1292034 155892 Caulobacter vibrioides OR37 strain=OR37 na latest Contig Major Full 2013-04-19 Caulobacter.strain_OR37_v1.0 Oak Ridge National Lab GCA_000372645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/645/GCF_000372645.1_Caulobacter.strain_OR37_v1.0/ na na na haploid bacteria 4430425 4430425 68.000000 0 70 70 NCBI RefSeq GCF_000372645.1-RS_2025_08_25 2025-08-25 4192 4069 55 23792749 GCF_000372665.1 PRJNA224116 SAMN01821533 APMQ00000000.1 na 1264675 329 Ralstonia pickettii OR214 strain=OR214 na latest Contig Major Full 2013-04-19 RalstonoaPickettii.strain_OR214_v1.0 Oak Ridge National Lab GCA_000372665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/665/GCF_000372665.1_RalstonoaPickettii.strain_OR214_v1.0/ na na na haploid bacteria 5480587 5480587 63.500000 0 46 46 NCBI RefSeq GCF_000372665.1-RS_2025_04_26 2025-04-26 5275 5116 54 23792748 GCF_000372745.1 PRJNA224116 SAMN02256465 ARCJ00000000.1 reference genome 1123320 159449 Embleya scabrispora DSM 41855 strain=DSM 41855 na latest Scaffold Major Full 2013-04-23 ASM37274v1 DOE Joint Genome Institute GCA_000372745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/745/GCF_000372745.1_ASM37274v1/ na assembly from type material na haploid bacteria 11392659 11388920 71.000000 0 191 199 NCBI RefSeq GCF_000372745.1-RS_2026_05_02 2026-05-02 10026 9629 70 na GCF_000372765.1 PRJNA224116 SAMN02256468 ARCN00000000.1 na 1132442 1132442 Bacillus sp. 37MA strain=37MA na latest Scaffold Major Full 2013-04-23 ASM37276v1 DOE Joint Genome Institute GCA_000372765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/765/GCF_000372765.1_ASM37276v1/ na na na haploid bacteria 3981584 3978784 40.500000 0 5 33 NCBI RefSeq GCF_000372765.1-RS_2024_07_02 2024-07-02 4245 3989 105 na GCF_000372805.1 PRJNA224116 SAMN02256466 ARCR00000000.1 reference genome 2739064 2739064 Marinobacter gelidimuriae strain=BF04_CF-4 na latest Scaffold Major Full 2013-04-23 ASM37280v1 DOE Joint Genome Institute GCA_000372805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/805/GCF_000372805.1_ASM37280v1/ na assembly from type material na haploid bacteria 3633797 3629441 54.500000 0 136 139 NCBI RefSeq GCF_000372805.1-RS_2025_12_09 2025-12-09 3744 3443 53 na GCF_000372825.1 PRJNA224116 SAMN02256406 ARCS00000000.1 na 1101192 1101192 Methylobacterium sp. 77 strain=77 na latest Scaffold Major Full 2013-04-26 ASM37282v1 DOE Joint Genome Institute GCA_000372825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/825/GCF_000372825.1_ASM37282v1/ na na na haploid bacteria 4664957 4664857 66.500000 0 1 2 NCBI RefSeq GCF_000372825.1-RS_2024_06_04 2024-06-04 4357 4241 69 na GCF_000372845.1 PRJNA224116 SAMN02256431 ARCT00000000.1 reference genome 1132444 173366 Methylocystis rosea SV97 strain=SV97 na latest Scaffold Major Full 2013-04-23 ASM37284v1 DOE Joint Genome Institute GCA_000372845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/845/GCF_000372845.1_ASM37284v1/ na assembly from type material na haploid bacteria 3912050 3911850 62.500000 0 2 4 NCBI RefSeq GCF_000372845.1-RS_2026_04_29 2026-04-29 3866 3708 55 na GCF_000372865.1 PRJNA224116 SAMN02256430 ARCU00000000.1 reference genome 1132443 105972 Methylosarcina fibrata AML-C10 strain=AML-C10 na latest Scaffold Major Full 2013-04-23 ASM37286v1 DOE Joint Genome Institute GCA_000372865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/865/GCF_000372865.1_ASM37286v1/ na assembly from type material na haploid bacteria 4978464 4978064 54.000000 0 2 6 NCBI RefSeq GCF_000372865.1-RS_2025_12_13 2025-12-13 4436 4315 54 na GCF_000372885.1 PRJNA224116 SAMN02256467 ARCV00000000.1 reference genome 1346290 1346290 Methyloversatilis thermotolerans strain=3t na latest Scaffold Major Full 2013-04-23 ASM37288v1 DOE Joint Genome Institute GCA_000372885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/885/GCF_000372885.1_ASM37288v1/ na assembly from type material na haploid bacteria 4161309 4160809 65.500000 0 4 9 NCBI RefSeq GCF_000372885.1-RS_2025_12_13 2025-12-13 3783 3710 55 na GCF_000372925.1 PRJNA224116 SAMN02441039 ARCX00000000.1 na 1206095 2426 Teredinibacter turnerae T0609 strain=T0609 na latest Scaffold Major Full 2013-04-23 ASM37292v1 DOE Joint Genome Institute GCA_000372925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/925/GCF_000372925.1_ASM37292v1/ na na na haploid bacteria 5069061 5066656 51.000000 0 49 54 NCBI RefSeq GCF_000372925.1-RS_2026_02_15 2026-02-15 4186 4104 48 na GCF_000372945.1 PRJNA224116 SAMN02441040 ARCY00000000.1 na 157910 157910 Paraburkholderia tuberum strain=WSM4176 na latest Scaffold Major Full 2013-04-23 ASM37294v1 DOE Joint Genome Institute GCA_000372945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/945/GCF_000372945.1_ASM37294v1/ na na na haploid bacteria 9065247 9060037 63.000000 0 13 66 NCBI RefSeq GCF_000372945.1-RS_2025_05_21 2025-05-21 8449 7873 84 na GCF_000372965.1 PRJNA224116 SAMN02441719 ARCZ00000000.1 na 1116369 1116369 Hoeflea sp. 108 strain=108 na latest Scaffold Major Full 2013-04-23 ASM37296v1 DOE Joint Genome Institute GCA_000372965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/965/GCF_000372965.1_ASM37296v1/ na na na haploid bacteria 6112094 6111994 63.500000 0 5 6 NCBI RefSeq GCF_000372965.1-RS_2024_05_05 2024-05-05 5911 5788 61 na GCF_000372985.1 PRJNA224116 SAMN02441720 ARDA00000000.1 na 2654982 2654982 Paraburkholderia atlantica strain=JPY251 na latest Scaffold Major Full 2013-04-23 ASM37298v1 DOE Joint Genome Institute GCA_000372985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/372/985/GCF_000372985.1_ASM37298v1/ na na na haploid bacteria 8609520 8609100 63.000000 0 122 124 NCBI RefSeq GCF_000372985.1-RS_2025_12_04 2025-12-04 7997 7591 68 na GCF_000373005.1 PRJNA224116 SAMN02441378 ARDB00000000.1 na 863227 863227 Trinickia symbiotica strain=JPY-347 na latest Scaffold Major Full 2013-04-23 ASM37300v1 DOE Joint Genome Institute GCA_000373005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/005/GCF_000373005.1_ASM37300v1/ na na na haploid bacteria 6387382 6386287 63.000000 0 57 60 NCBI RefSeq GCF_000373005.1-RS_2026_01_15 2026-01-15 5861 5677 53 na GCF_000373025.1 PRJNA224116 SAMN02441721 ARDC00000000.1 na 1041138 56730 Rhizobium gallicum bv. gallicum R602sp strain=R602sp na latest Scaffold Major Full 2013-04-23 ASM37302v1 DOE Joint Genome Institute GCA_000373025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/025/GCF_000373025.1_ASM37302v1/ na na na haploid bacteria 7220242 7220147 61.000000 0 38 39 NCBI RefSeq GCF_000373025.1-RS_2025_01_23 2025-01-23 7012 6772 55 na GCF_000373045.1 PRJNA224116 SAMN02440425 ARDD00000000.1 na 1122172 157691 Leptotrichia shahii DSM 19757 strain=DSM 19757 na latest Scaffold Major Full 2013-04-23 ASM37304v1 DOE Joint Genome Institute GCA_000373045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/045/GCF_000373045.1_ASM37304v1/ na assembly from type material na haploid bacteria 2144606 2144001 29.500000 0 20 22 NCBI RefSeq GCF_000373045.1-RS_2026_05_16 2026-05-16 2031 1963 54 na GCF_000373065.1 PRJNA224116 SAMN02441041 ARDE00000000.1 na 1121865 1355 Enterococcus columbae DSM 7374 = ATCC 51263 strain=DSM 7374 na latest Scaffold Major Full 2013-04-23 ASM37306v1 DOE Joint Genome Institute GCA_000373065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/065/GCF_000373065.1_ASM37306v1/ na assembly from type material na haploid bacteria 2506728 2502159 36.500000 0 40 44 NCBI RefSeq GCF_000373065.1-RS_2026_05_16 2026-05-16 2402 2299 61 na GCF_000373085.1 PRJNA224116 SAMN02441379 ARDF00000000.1 na 1121098 204516 Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 strain=DSM 17679 na latest Scaffold Major Full 2013-04-23 ASM37308v1 DOE Joint Genome Institute GCA_000373085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/085/GCF_000373085.1_ASM37308v1/ na assembly from type material na haploid bacteria 4510688 4507232 42.500000 0 94 99 NCBI RefSeq GCF_000373085.1-RS_2026_01_08 2026-01-08 3925 3739 68 na GCF_000373105.1 PRJNA224116 SAMN02441042 ARDG00000000.1 reference genome 1122179 70998 Neolewinella persica DSM 23188 strain=DSM 23188 na latest Scaffold Major Full 2013-04-23 ASM37310v1 DOE Joint Genome Institute GCA_000373105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/105/GCF_000373105.1_ASM37310v1/ na assembly from type material na haploid bacteria 7082771 7075047 51.500000 0 85 111 NCBI RefSeq GCF_000373105.1-RS_2025_11_28 2025-11-28 5245 5161 59 na GCF_000373125.1 PRJNA224116 SAMN02441380 ARDH00000000.1 na 1040988 1040988 Bradyrhizobium sp. WSM4349 strain=WSM4349 na latest Scaffold Major Full 2013-04-23 ASM37312v1 DOE Joint Genome Institute GCA_000373125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/125/GCF_000373125.1_ASM37312v1/ na na na haploid bacteria 8294334 8292044 63.000000 0 104 107 NCBI RefSeq GCF_000373125.1-RS_2024_08_22 2024-08-22 8028 7625 53 na GCF_000373145.1 PRJNA224116 SAMN02441370 ARDI00000000.1 na 1123390 56957 Thermus oshimai DSM 12092 strain=DSM 12092 na latest Scaffold Major Full 2013-04-23 ASM37314v1 DOE Joint Genome Institute GCA_000373145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/145/GCF_000373145.1_ASM37314v1/ na assembly from type material na haploid bacteria 2260954 2260385 68.500000 0 24 27 NCBI RefSeq GCF_000373145.1-RS_2026_05_02 2026-05-02 2414 2322 61 na GCF_000373165.1 PRJNA224116 SAMN02441722 ARDJ00000000.1 na 1125975 1757 Thermoanaerobacter ethanolicus subsp. indiensis BSB-33 strain=BSB-33 na latest Scaffold Major Full 2013-04-26 ASM37316v1 DOE Joint Genome Institute GCA_000373165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/165/GCF_000373165.1_ASM37316v1/ na assembly from type material na haploid bacteria 2597606 2595106 34.000000 0 1 26 NCBI RefSeq GCF_000373165.1-RS_2026_03_13 2026-03-13 2628 2451 74 na GCF_000373185.1 PRJNA224116 SAMN02441031 ARDK00000000.1 reference genome 1122990 185294 Segatella paludivivens DSM 17968 = JCM 13650 strain=DSM 17968 na latest Scaffold Major Full 2013-04-23 ASM37318v1 DOE Joint Genome Institute GCA_000373185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/185/GCF_000373185.1_ASM37318v1/ na assembly from type material na haploid bacteria 3455832 3453907 37.500000 0 61 63 NCBI RefSeq GCF_000373185.1-RS_2025_11_23 2025-11-23 2749 2662 56 na GCF_000373205.1 PRJNA224116 SAMN02441032 ARDL00000000.1 reference genome 1122223 307124 Calidithermus timidus DSM 17022 strain=DSM 17022 na latest Scaffold Major Full 2013-04-23 ASM37320v1 DOE Joint Genome Institute GCA_000373205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/205/GCF_000373205.1_ASM37320v1/ na assembly from type material na haploid bacteria 3190628 3188709 65.500000 0 17 22 NCBI RefSeq GCF_000373205.1-RS_2026_03_30 2026-03-30 3178 3083 55 na GCF_000373225.1 PRJNA224116 SAMN02441710 ARDM00000000.1 na 1155716 1155716 Streptomyces sp. LaPpAH-202 strain=LaPpAH-202 na latest Scaffold Major Full 2013-04-23 ASM37322v1 DOE Joint Genome Institute GCA_000373225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/225/GCF_000373225.1_ASM37322v1/ na na na haploid bacteria 7004837 7002408 73.500000 0 34 37 NCBI RefSeq GCF_000373225.1-RS_2025_03_25 2025-03-25 6093 5958 79 na GCF_000373245.1 PRJNA224116 SAMN02441711 ARDN00000000.1 na 1121859 346377 Echinicola pacifica DSM 19836 strain=DSM 19836 na latest Scaffold Major Full 2013-04-23 ASM37324v1 DOE Joint Genome Institute GCA_000373245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/245/GCF_000373245.1_ASM37324v1/ na assembly from type material na haploid bacteria 5442202 5434320 44.000000 0 23 30 NCBI RefSeq GCF_000373245.1-RS_2025_12_02 2025-12-02 4011 3949 48 na GCF_000373265.1 PRJNA224116 SAMN02441712 ARDO00000000.1 reference genome 1122967 336989 Pontibacter roseus DSM 17521 strain=DSM 17521 na latest Scaffold Major Full 2013-04-23 ASM37326v1 DOE Joint Genome Institute GCA_000373265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/265/GCF_000373265.1_ASM37326v1/ na assembly from type material na haploid bacteria 4581480 4580463 52.500000 0 12 14 NCBI RefSeq GCF_000373265.1-RS_2025_12_09 2025-12-09 4029 3969 50 na GCF_000373305.1 PRJNA224116 SAMN02441713 ARDQ00000000.1 na 1155715 1155715 Streptomyces sp. CcalMP-8W strain=CcalMP-8W na latest Scaffold Major Full 2013-04-23 ASM37330v1 DOE Joint Genome Institute GCA_000373305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/305/GCF_000373305.1_ASM37330v1/ na na na haploid bacteria 7805445 7805410 72.500000 0 36 37 NCBI RefSeq GCF_000373305.1-RS_2025_03_25 2025-03-25 6615 6438 74 na GCF_000373345.1 PRJNA224116 SAMN02440426 ARDS00000000.1 na 1122174 157687 Leptotrichia wadei DSM 19758 strain=DSM 19758 na latest Scaffold Major Full 2013-04-23 ASM37334v1 DOE Joint Genome Institute GCA_000373345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/345/GCF_000373345.1_ASM37334v1/ na assembly from type material na haploid bacteria 2316529 2314249 29.500000 0 64 65 NCBI RefSeq GCF_000373345.1-RS_2026_05_16 2026-05-16 2209 2124 57 na GCF_000373365.1 PRJNA224116 SAMN02441714 ARDT00000000.1 reference genome 365528 365528 Parafrankia discariae strain=BCU110501 na latest Scaffold Major Full 2013-04-23 ASM37336v1 DOE Joint Genome Institute GCA_000373365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/365/GCF_000373365.1_ASM37336v1/ na assembly from type material na haploid bacteria 7891711 7887841 72.500000 0 194 200 NCBI RefSeq GCF_000373365.1-RS_2025_12_09 2025-12-09 6781 6457 59 23846281 GCF_000373385.1 PRJNA224116 SAMN02441034 ARDU00000000.1 reference genome 1123393 931 Thiobacillus thioparus DSM 505 strain=DSM 505 na latest Scaffold Major Full 2013-04-23 ASM37338v1 DOE Joint Genome Institute GCA_000373385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/385/GCF_000373385.1_ASM37338v1/ na assembly from type material na haploid bacteria 3201518 3200073 62.500000 0 18 20 NCBI RefSeq GCF_000373385.1-RS_2026_05_02 2026-05-02 3211 3138 55 na GCF_000373405.1 PRJNA224116 SAMN02441715 ARDV00000000.1 na 1156841 1156841 Streptomyces sp. ScaeMP-e10 strain=ScaeMP-e10 na latest Scaffold Major Full 2013-04-23 ASM37340v1 DOE Joint Genome Institute GCA_000373405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/405/GCF_000373405.1_ASM37340v1/ na na na haploid bacteria 8075580 8074805 71.500000 0 20 22 NCBI RefSeq GCF_000373405.1-RS_2025_03_25 2025-03-25 7196 7011 76 na GCF_000373425.1 PRJNA224116 SAMN02441035 ARDW00000000.1 na 1041141 384 Rhizobium leguminosarum bv. viciae 128C53 strain=128C53 na latest Scaffold Major Full 2013-04-23 ASM37342v1 DOE Joint Genome Institute GCA_000373425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/425/GCF_000373425.1_ASM37342v1/ na na na haploid bacteria 7609235 7609050 60.500000 0 72 75 NCBI RefSeq GCF_000373425.1-RS_2026_04_29 2026-04-29 7408 7122 47 na GCF_000373465.1 PRJNA224116 SAMN02441716 ARDY00000000.1 na 1157639 1157639 Streptomyces sp. FxanaD5 strain=FxanaD5 na latest Scaffold Major Full 2013-04-23 ASM37346v1 DOE Joint Genome Institute GCA_000373465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/465/GCF_000373465.1_ASM37346v1/ na na na haploid bacteria 7586126 7585946 72.000000 0 103 105 NCBI RefSeq GCF_000373465.1-RS_2024_05_14 2024-05-14 6999 6733 82 na GCF_000373485.1 PRJNA224116 SAMN02440427 ARDZ00000000.1 reference genome 1121374 471499 Dasania marina DSM 21967 strain=DSM 21967 na latest Scaffold Major Full 2013-04-23 ASM37348v1 DOE Joint Genome Institute GCA_000373485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/485/GCF_000373485.1_ASM37348v1/ na assembly from type material na haploid bacteria 4104988 4104668 47.500000 0 18 20 NCBI RefSeq GCF_000373485.1-RS_2026_03_30 2026-03-30 3694 3623 58 na GCF_000373525.1 PRJNA224116 SAMN02440428 AREB00000000.1 na 1156843 1156843 Streptomyces sp. LaPpAH-165 strain=LaPpAH-165 na latest Scaffold Major Full 2013-04-23 ASM37352v1 DOE Joint Genome Institute GCA_000373525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/525/GCF_000373525.1_ASM37352v1/ na na na haploid bacteria 7564905 7563285 72.000000 0 35 36 NCBI RefSeq GCF_000373525.1-RS_2025_03_25 2025-03-25 6801 6635 78 na GCF_000373545.1 PRJNA224116 SAMN02440429 AREC00000000.1 reference genome 942938 46356 Alkalispirochaeta alkalica DSM 8900 strain=DSM 8900 na latest Scaffold Major Full 2013-04-23 ASM37354v1 DOE Joint Genome Institute GCA_000373545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/545/GCF_000373545.1_ASM37354v1/ na assembly from type material na haploid bacteria 3358314 3347706 60.500000 0 71 87 NCBI RefSeq GCF_000373545.1-RS_2025_08_04 2025-08-04 2710 2633 53 na GCF_000373565.1 PRJNA224116 SAMN02440430 ARED00000000.1 na 1156844 1156844 Streptomyces sp. HmicA12 strain=HmicA12 na latest Scaffold Major Full 2013-04-23 ASM37356v1 DOE Joint Genome Institute GCA_000373565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/565/GCF_000373565.1_ASM37356v1/ na na na haploid bacteria 9161949 9159518 71.000000 0 56 59 NCBI RefSeq GCF_000373565.1-RS_2025_03_25 2025-03-25 8411 8170 80 na GCF_000373585.1 PRJNA224116 SAMN02440431 AREE00000000.1 na 1155718 1155718 Streptomyces sp. MspMP-M5 strain=MspMP-M5 na latest Scaffold Major Full 2013-04-23 ASM37358v1 DOE Joint Genome Institute GCA_000373585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/585/GCF_000373585.1_ASM37358v1/ na na na haploid bacteria 8596663 8596465 72.000000 0 120 123 NCBI RefSeq GCF_000373585.1-RS_2025_03_25 2025-03-25 7720 7372 85 na GCF_000373605.1 PRJNA224116 SAMN02441718 AREF00000000.1 na 1000570 1328 Streptococcus anginosus SK52 = DSM 20563 strain=DSM 20563 na latest Scaffold Major Full 2013-04-23 ASM37360v1 DOE Joint Genome Institute GCA_000373605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/605/GCF_000373605.1_ASM37360v1/ na assembly from type material na haploid bacteria 1938196 1935775 38.500000 0 14 16 NCBI RefSeq GCF_000373605.1-RS_2026_05_16 2026-05-16 1900 1799 44 na GCF_000373625.1 PRJNA224116 SAMN02441702 AREG00000000.1 na 1155714 1155714 Streptomyces sp. LaPpAH-108 strain=LaPpAH-108 na latest Scaffold Major Full 2013-04-23 ASM37362v1 DOE Joint Genome Institute GCA_000373625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/625/GCF_000373625.1_ASM37362v1/ na na na haploid bacteria 6850887 6850787 72.000000 0 14 15 NCBI RefSeq GCF_000373625.1-RS_2025_03_25 2025-03-25 6215 6038 80 na GCF_000373645.1 PRJNA224116 SAMN02441037 AREH00000000.1 na 1157635 1157635 Streptomyces sp. ATexAB-D23 strain=ATexAB-D23 na latest Scaffold Major Full 2013-04-23 ASM37364v1 DOE Joint Genome Institute GCA_000373645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/645/GCF_000373645.1_ASM37364v1/ na na na haploid bacteria 7948485 7947807 71.500000 0 89 92 NCBI RefSeq GCF_000373645.1-RS_2025_03_25 2025-03-25 7014 6829 80 na GCF_000373665.1 PRJNA224116 SAMN02441703 AREI00000000.1 na 1157637 1157637 Streptomyces sp. BoleA5 strain=BoleA5 na latest Scaffold Major Full 2013-04-23 ASM37366v1 DOE Joint Genome Institute GCA_000373665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/665/GCF_000373665.1_ASM37366v1/ na na na haploid bacteria 8646873 8646538 72.500000 0 67 70 NCBI RefSeq GCF_000373665.1-RS_2025_03_25 2025-03-25 8097 7728 83 na GCF_000373685.1 PRJNA224116 SAMN02441038 AREJ00000000.1 na 1157638 1157638 Streptomyces sp. PsTaAH-124 strain=PsTaAH-124 na latest Scaffold Major Full 2013-04-23 ASM37368v1 DOE Joint Genome Institute GCA_000373685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/685/GCF_000373685.1_ASM37368v1/ na na na haploid bacteria 8808859 8805954 73.000000 0 53 55 NCBI RefSeq GCF_000373685.1-RS_2025_03_25 2025-03-25 7659 7433 96 na GCF_000373705.1 PRJNA224116 SAMN02441704 AREK00000000.1 na 1122987 189723 Prevotella micans DSM 21469 = JCM 16134 strain=DSM 21469 na latest Scaffold Major Full 2013-04-23 ASM37370v1 DOE Joint Genome Institute GCA_000373705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/705/GCF_000373705.1_ASM37370v1/ na assembly from type material na haploid bacteria 2435292 2434532 45.500000 0 50 56 NCBI RefSeq GCF_000373705.1-RS_2026_05_16 2026-05-16 1973 1862 47 na GCF_000373725.1 PRJNA224116 SAMN02441705 AREL00000000.1 na 1120925 202951 Acinetobacter bouvetii DSM 14964 = CIP 107468 strain=DSM 14964 na latest Scaffold Major Full 2013-04-23 ASM37372v1 DOE Joint Genome Institute GCA_000373725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/725/GCF_000373725.1_ASM37372v1/ na assembly from type material na haploid bacteria 3356470 3356325 45.000000 0 19 20 NCBI RefSeq GCF_000373725.1-RS_2025_12_23 2025-12-23 3213 3072 86 na GCF_000373745.1 PRJNA224116 SAMN02441372 AREM00000000.1 na 1122619 90244 Oligella ureolytica DSM 18253 strain=DSM 18253 na latest Scaffold Major Full 2013-04-23 ASM37374v1 DOE Joint Genome Institute GCA_000373745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/745/GCF_000373745.1_ASM37374v1/ na assembly from type material na haploid bacteria 2668297 2668207 44.500000 0 98 100 NCBI RefSeq GCF_000373745.1-RS_2026_04_26 2026-04-26 2647 2526 46 na GCF_000373765.1 PRJNA224116 SAMN02440432 AREN00000000.1 na 1122169 45075 Legionella shakespearei DSM 23087 strain=DSM 23087 na latest Scaffold Major Full 2013-04-23 ASM37376v1 DOE Joint Genome Institute GCA_000373765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/765/GCF_000373765.1_ASM37376v1/ na assembly from type material na haploid bacteria 3512682 3507313 41.500000 0 57 70 NCBI RefSeq GCF_000373765.1-RS_2026_05_16 2026-05-16 2962 2890 44 na GCF_000373785.1 PRJNA224116 SAMN02440433 AREO00000000.1 reference genome 1121874 38402 Erysipelothrix tonsillarum DSM 14972 strain=DSM 14972 na latest Scaffold Major Full 2013-04-23 ASM37378v1 DOE Joint Genome Institute GCA_000373785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/785/GCF_000373785.1_ASM37378v1/ na assembly from type material na haploid bacteria 1931022 1930392 37.000000 0 4 6 NCBI RefSeq GCF_000373785.1-RS_2026_04_23 2026-04-23 1855 1779 65 na GCF_000373805.1 PRJNA224116 SAMN02441706 AREP00000000.1 na 1121366 35756 Corynebacterium pilosum DSM 20521 = CIP 103422 strain=DSM 20521 na latest Scaffold Major Full 2013-04-23 ASM37380v1 DOE Joint Genome Institute GCA_000373805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/805/GCF_000373805.1_ASM37380v1/ na assembly from type material na haploid bacteria 2531632 2530403 60.500000 0 35 36 NCBI RefSeq GCF_000373805.1-RS_2026_06_23 2026-06-23 2427 2325 56 na GCF_000373825.1 PRJNA224116 SAMN02441023 AREQ00000000.1 na 1137264 168697 Salinispora arenicola CNT849 strain=CNT849 na latest Scaffold Major Full 2013-04-23 ASM37382v1 DOE Joint Genome Institute GCA_000373825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/825/GCF_000373825.1_ASM37382v1/ na na na haploid bacteria 5720436 5718096 69.500000 0 51 56 NCBI RefSeq GCF_000373825.1-RS_2026_05_12 2026-05-12 5206 4974 66 na GCF_000373845.1 PRJNA224116 SAMN02441707 ARER00000000.1 na 1144930 168697 Salinispora arenicola CNS673 strain=CNS673 na latest Scaffold Major Full 2013-04-23 ASM37384v1 DOE Joint Genome Institute GCA_000373845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/845/GCF_000373845.1_ASM37384v1/ na na na haploid bacteria 5875699 5874213 69.500000 0 83 89 NCBI RefSeq GCF_000373845.1-RS_2026_02_15 2026-02-15 5388 5123 90 na GCF_000373865.1 PRJNA224116 SAMN02440434 ARES00000000.1 na 1121315 36841 Terrisporobacter glycolicus ATCC 14880 = DSM 1288 strain=ATCC 14880 na latest Scaffold Major Full 2013-04-23 ASM37386v1 DOE Joint Genome Institute GCA_000373865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/865/GCF_000373865.1_ASM37386v1/ na assembly from type material na haploid bacteria 4001803 3993563 28.500000 0 30 36 NCBI RefSeq GCF_000373865.1-RS_2026_02_27 2026-02-27 3915 3835 58 na GCF_000373885.1 PRJNA224116 SAMN02441708 ARET00000000.1 na 1121114 33035 Blautia producta ATCC 27340 = DSM 2950 strain=ATCC 27340 na latest Scaffold Major Full 2013-04-23 ASM37388v1 DOE Joint Genome Institute GCA_000373885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/885/GCF_000373885.1_ASM37388v1/ na assembly from type material na haploid bacteria 6085687 6085111 45.500000 0 68 71 NCBI RefSeq GCF_000373885.1-RS_2026_02_27 2026-02-27 5696 5487 77 na GCF_000373905.1 PRJNA224116 SAMN02441709 AREU00000000.1 na 1157943 1157943 Mycobacterium sp. 155 strain=155 na latest Scaffold Major Full 2013-04-23 ASM37390v1 DOE Joint Genome Institute GCA_000373905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/905/GCF_000373905.1_ASM37390v1/ na na na haploid bacteria 4609894 4609794 65.500000 0 2 3 NCBI RefSeq GCF_000373905.1-RS_2024_08_13 2024-08-13 4379 4195 56 na GCF_000373925.1 PRJNA224116 SAMN02440435 AREV00000000.1 reference genome 1120950 533267 Actinopolymorpha alba DSM 45243 strain=DSM 45243 na latest Scaffold Major Full 2013-04-23 ASM37392v1 DOE Joint Genome Institute GCA_000373925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/925/GCF_000373925.1_ASM37392v1/ na assembly from type material na haploid bacteria 7983713 7979661 68.000000 0 127 130 NCBI RefSeq GCF_000373925.1-RS_2026_03_21 2026-03-21 7460 7236 55 na GCF_000373945.1 PRJNA224116 SAMN02440436 AREW00000000.1 na 1121862 305900 Endozoicomonas elysicola DSM 22380 strain=DSM 22380 na latest Scaffold Major Full 2013-04-23 ASM37394v1 DOE Joint Genome Institute GCA_000373945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/945/GCF_000373945.1_ASM37394v1/ na assembly from type material na haploid bacteria 5545668 5545378 46.500000 0 31 33 NCBI RefSeq GCF_000373945.1-RS_2026_05_16 2026-05-16 4646 4543 88 na GCF_000373965.1 PRJNA224116 SAMN02441373 AREX00000000.1 reference genome 1123487 392736 Uliginosibacterium gangwonense DSM 18521 strain=DSM 18521 na latest Scaffold Major Full 2013-04-23 ASM37396v1 DOE Joint Genome Institute GCA_000373965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/965/GCF_000373965.1_ASM37396v1/ na assembly from type material na haploid bacteria 5021710 5021435 56.500000 0 35 36 NCBI RefSeq GCF_000373965.1-RS_2026_05_02 2026-05-02 4654 4567 55 na GCF_000373985.1 PRJNA224116 SAMN02441374 AREY00000000.1 reference genome 1121396 2290 Desulfobacter curvatus DSM 3379 strain=DSM 3379 na latest Scaffold Major Full 2013-04-23 ASM37398v1 DOE Joint Genome Institute GCA_000373985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/373/985/GCF_000373985.1_ASM37398v1/ na assembly from type material na haploid bacteria 5644283 5638243 47.000000 0 234 239 NCBI RefSeq GCF_000373985.1-RS_2026_05_02 2026-05-02 4950 4820 54 na GCF_000374005.1 PRJNA224116 SAMN02441694 AREZ00000000.1 reference genome 1122135 454162 Kiloniella laminariae DSM 19542 strain=DSM 19542 na latest Scaffold Major Full 2013-04-23 ASM37400v1 DOE Joint Genome Institute GCA_000374005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/005/GCF_000374005.1_ASM37400v1/ na assembly from type material na haploid bacteria 4438944 4436995 51.500000 0 38 40 NCBI RefSeq GCF_000374005.1-RS_2026_05_02 2026-05-02 4165 4102 48 na GCF_000374025.1 PRJNA224116 SAMN02441375 ARFA00000000.1 reference genome 1123277 496058 Spirosoma panaciterrae DSM 21099 strain=DSM 21099 na latest Scaffold Major Full 2013-04-23 ASM37402v1 DOE Joint Genome Institute GCA_000374025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/025/GCF_000374025.1_ASM37402v1/ na assembly from type material na haploid bacteria 8129284 8119226 49.000000 0 73 81 NCBI RefSeq GCF_000374025.1-RS_2026_05_02 2026-05-02 6760 6658 56 na GCF_000374045.1 PRJNA224116 SAMN02440437 ARFB00000000.1 reference genome 1123248 398037 Segetibacter koreensis DSM 18137 strain=DSM 18137 na latest Scaffold Major Full 2013-04-23 ASM37404v1 DOE Joint Genome Institute GCA_000374045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/045/GCF_000374045.1_ASM37404v1/ na assembly from type material na haploid bacteria 6107890 6107205 37.500000 0 73 75 NCBI RefSeq GCF_000374045.1-RS_2026_05_02 2026-05-02 5093 4986 51 na GCF_000374065.1 PRJNA224116 SAMN02441024 ARFC00000000.1 reference genome 1123276 431553 Spirosoma luteum DSM 19990 strain=DSM 19990 na latest Scaffold Major Full 2013-04-23 ASM37406v1 DOE Joint Genome Institute GCA_000374065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/065/GCF_000374065.1_ASM37406v1/ na assembly from type material na haploid bacteria 6613584 6608924 50.500000 0 69 74 NCBI RefSeq GCF_000374065.1-RS_2026_05_02 2026-05-02 5622 5510 49 na GCF_000374085.1 PRJNA224116 SAMN02441695 ARFD00000000.1 reference genome 1123278 431554 Spirosoma spitsbergense DSM 19989 strain=DSM 19989 na latest Scaffold Major Full 2013-04-23 ASM37408v1 DOE Joint Genome Institute GCA_000374085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/085/GCF_000374085.1_ASM37408v1/ na assembly from type material na haploid bacteria 7547982 7544353 50.500000 0 238 244 NCBI RefSeq GCF_000374085.1-RS_2026_05_02 2026-05-02 6630 6429 50 na GCF_000374105.1 PRJNA224116 SAMN02441025 ARFE00000000.1 reference genome 1122134 261965 Kangiella aquimarina DSM 16071 strain=DSM 16071 na latest Scaffold Major Full 2013-04-23 ASM37410v1 DOE Joint Genome Institute GCA_000374105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/105/GCF_000374105.1_ASM37410v1/ na assembly from type material na haploid bacteria 2681803 2681248 43.500000 0 3 4 NCBI RefSeq GCF_000374105.1-RS_2025_12_10 2025-12-10 2510 2447 53 na GCF_000374125.1 PRJNA224116 SAMN02441376 ARFF00000000.1 reference genome 1122605 379900 Niabella aurantiaca DSM 17617 strain=DSM 17617 na latest Scaffold Major Full 2013-04-23 ASM37412v1 DOE Joint Genome Institute GCA_000374125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/125/GCF_000374125.1_ASM37412v1/ na assembly from type material na haploid bacteria 5927438 5925983 48.500000 0 25 28 NCBI RefSeq GCF_000374125.1-RS_2026_05_02 2026-05-02 4822 4737 65 na GCF_000374145.1 PRJNA224116 SAMN02441696 ARFG00000000.1 reference genome 1122218 217219 Neomegalonema perideroedes DSM 15528 strain=DSM 15528 na latest Scaffold Major Full 2013-04-23 ASM37414v1 DOE Joint Genome Institute GCA_000374145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/145/GCF_000374145.1_ASM37414v1/ na assembly from type material na haploid bacteria 3409949 3408977 67.000000 0 17 22 NCBI RefSeq GCF_000374145.1-RS_2025_12_10 2025-12-10 3118 3039 54 na GCF_000374165.1 PRJNA224116 SAMN02440438 ARFH00000000.1 reference genome 222534 222534 Parafrankia elaeagni strain=BMG5.12 na latest Scaffold Major Full 2013-04-23 ASM37416v1 DOE Joint Genome Institute GCA_000374165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/165/GCF_000374165.1_ASM37416v1/ na assembly from type material na haploid bacteria 7589313 7588936 71.500000 0 135 136 NCBI RefSeq GCF_000374165.1-RS_2025_12_09 2025-12-09 6283 5990 58 23846272 GCF_000374185.1 PRJNA224116 SAMN02441697 ARFI00000000.1 na 1034769 1034769 Paenibacillus sp. HW567 strain=HW567 na latest Scaffold Major Full 2013-04-26 ASM37418v1 DOE Joint Genome Institute GCA_000374185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/185/GCF_000374185.1_ASM37418v1/ na na na haploid bacteria 6836219 6835319 50.500000 0 1 10 NCBI RefSeq GCF_000374185.1-RS_2025_08_25 2025-08-25 5967 5812 102 na GCF_000374225.1 PRJNA224116 SAMN02440439 ARFK00000000.1 na 1112273 1112273 Methylophilus sp. 1 strain=1 na latest Scaffold Major Full 2013-04-26 ASM37422v1 DOE Joint Genome Institute GCA_000374225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/225/GCF_000374225.1_ASM37422v1/ na na na haploid bacteria 2969148 2968648 50.500000 0 1 6 NCBI RefSeq GCF_000374225.1-RS_2024_08_13 2024-08-13 2813 2757 52 na GCF_000374245.1 PRJNA224116 SAMN02441027 ARFL00000000.1 na 1119528 1119528 Methyloversatilis discipulorum strain=RZ94 na latest Scaffold Major Full 2013-04-26 ASM37424v1 DOE Joint Genome Institute GCA_000374245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/245/GCF_000374245.1_ASM37424v1/ na na na haploid bacteria 4304808 4304608 66.500000 0 1 3 NCBI RefSeq GCF_000374245.1-RS_2026_02_15 2026-02-15 4016 3949 58 na GCF_000374285.1 PRJNA224116 SAMN02441362 ARFN00000000.1 reference genome 1120931 717 Actinobacillus capsulatus DSM 19761 strain=DSM 19761 na latest Scaffold Major Full 2013-04-23 ASM37428v1 DOE Joint Genome Institute GCA_000374285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/285/GCF_000374285.1_ASM37428v1/ na assembly from type material na haploid bacteria 2621135 2620580 40.000000 0 46 49 NCBI RefSeq GCF_000374285.1-RS_2026_05_02 2026-05-02 2592 2421 61 na GCF_000374305.1 PRJNA224116 SAMN02441028 ARFO00000000.1 reference genome 561175 1120938 Actinomadura flavalba DSM 45200 strain=DSM 45200 na latest Scaffold Major Full 2013-04-23 ASM37430v1 DOE Joint Genome Institute GCA_000374305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/305/GCF_000374305.1_ASM37430v1/ na assembly from type material na haploid bacteria 6167782 6167487 73.500000 0 22 24 NCBI RefSeq GCF_000374305.1-RS_2026_03_30 2026-03-30 5737 5642 64 na GCF_000374325.1 PRJNA224116 SAMN02441698 ARFP00000000.1 reference genome 1120978 166939 Allofustis seminis DSM 15817 strain=DSM 15817 na latest Scaffold Major Full 2013-04-23 ASM37432v1 DOE Joint Genome Institute GCA_000374325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/325/GCF_000374325.1_ASM37432v1/ na assembly from type material na haploid bacteria 1441290 1440955 37.500000 0 14 15 NCBI RefSeq GCF_000374325.1-RS_2026_05_02 2026-05-02 1474 1385 68 na GCF_000374345.1 PRJNA224116 SAMN02441029 ARFQ00000000.1 reference genome 444461 1121084 Heyndrickxia acidiproducens DSM 23148 strain=DSM 23148 na latest Scaffold Major Full 2013-04-23 ASM37434v1 DOE Joint Genome Institute GCA_000374345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/345/GCF_000374345.1_ASM37434v1/ na assembly from type material na haploid bacteria 3318479 3313239 44.500000 0 103 111 NCBI RefSeq GCF_000374345.1-RS_2026_04_07 2026-04-07 3333 3161 95 na GCF_000374365.1 PRJNA224116 SAMN02441363 ARFR00000000.1 reference genome 1121096 376806 Bacteroides gallinarum DSM 18171 = JCM 13658 strain=DSM 18171 na latest Scaffold Major Full 2013-04-23 ASM37436v1 DOE Joint Genome Institute GCA_000374365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/365/GCF_000374365.1_ASM37436v1/ na assembly from type material na haploid bacteria 4917576 4916921 47.500000 0 102 105 NCBI RefSeq GCF_000374365.1-RS_2026_04_21 2026-04-21 4232 4068 65 na GCF_000374385.1 PRJNA224116 SAMN02440440 ARFS00000000.1 na 1121121 1465 Brevibacillus laterosporus DSM 25 strain=DSM 25 na latest Scaffold Major Full 2013-04-23 ASM37438v1 DOE Joint Genome Institute GCA_000374385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/385/GCF_000374385.1_ASM37438v1/ na assembly from type material na haploid bacteria 5278007 5274658 40.500000 0 69 73 NCBI RefSeq GCF_000374385.1-RS_2026_05_16 2026-05-16 4947 4739 105 na GCF_000374405.1 PRJNA224116 SAMN02441030 ARFT00000000.1 reference genome 1123058 103810 Riemerella columbina DSM 16469 strain=DSM 16469 na latest Scaffold Major Full 2013-04-23 ASM37440v1 DOE Joint Genome Institute GCA_000374405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/405/GCF_000374405.1_ASM37440v1/ na assembly from type material na haploid bacteria 2436793 2436368 36.000000 0 67 69 NCBI RefSeq GCF_000374405.1-RS_2026_05_02 2026-05-02 2465 2358 49 na GCF_000374425.1 PRJNA224116 SAMN02440441 ARFU00000000.1 na 1120928 202955 Acinetobacter tjernbergiae DSM 14971 = CIP 107465 strain=DSM 14971 na latest Scaffold Major Full 2013-04-23 ASM37442v1 DOE Joint Genome Institute GCA_000374425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/425/GCF_000374425.1_ASM37442v1/ na assembly from type material na haploid bacteria 3692377 3692277 38.500000 0 50 51 NCBI RefSeq GCF_000374425.1-RS_2025_12_23 2025-12-23 3566 3392 72 na GCF_000374445.1 PRJNA224116 SAMN02441015 ARFV00000000.1 reference genome 1120934 155975 Actinokineospora enzanensis DSM 44649 strain=DSM 44649 na latest Scaffold Major Full 2013-04-23 ASM37444v1 DOE Joint Genome Institute GCA_000374445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/445/GCF_000374445.1_ASM37444v1/ na assembly from type material na haploid bacteria 8119858 8118898 71.000000 0 88 95 NCBI RefSeq GCF_000374445.1-RS_2026_05_02 2026-05-02 7361 7203 71 na GCF_000374465.1 PRJNA224116 SAMN02441016 ARFW00000000.1 reference genome 1120961 76980 Ahrensia kielensis DSM 5890 strain=DSM 5890 na latest Scaffold Major Full 2013-04-23 ASM37446v1 DOE Joint Genome Institute GCA_000374465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/465/GCF_000374465.1_ASM37446v1/ na assembly from type material na haploid bacteria 3364770 3360650 48.000000 0 13 16 NCBI RefSeq GCF_000374465.1-RS_2026_05_02 2026-05-02 3287 3202 49 na GCF_000374485.1 PRJNA224116 SAMN02441017 ARFX00000000.1 reference genome 1120963 163869 Algicola sagamiensis DSM 14643 strain=DSM 14643 na latest Scaffold Major Full 2013-04-23 ASM37448v1 DOE Joint Genome Institute GCA_000374485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/485/GCF_000374485.1_ASM37448v1/ na assembly from type material na haploid bacteria 4341282 4339069 43.000000 0 37 41 NCBI RefSeq GCF_000374485.1-RS_2025_12_10 2025-12-10 4032 3901 87 na GCF_000374505.1 PRJNA224116 SAMN02441364 ARFY00000000.1 na 1203611 328813 Alistipes onderdonkii WAL 8169 = DSM 19147 strain=DSM 19147 na latest Scaffold Major Full 2013-04-23 ASM37450v1 DOE Joint Genome Institute GCA_000374505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/505/GCF_000374505.1_ASM37450v1/ na assembly from type material na haploid bacteria 3865648 3864643 58.000000 0 29 32 NCBI RefSeq GCF_000374505.1-RS_2026_05_16 2026-05-16 3204 3100 53 na GCF_000374525.1 PRJNA224116 SAMN02440442 ARFZ00000000.1 reference genome 1120983 340680 Amorphus coralli DSM 19760 strain=DSM 19760 na latest Scaffold Major Full 2013-04-23 ASM37452v1 DOE Joint Genome Institute GCA_000374525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/525/GCF_000374525.1_ASM37452v1/ na assembly from type material na haploid bacteria 4317545 4317260 67.000000 0 12 13 NCBI RefSeq GCF_000374525.1-RS_2026_05_02 2026-05-02 3955 3878 54 na GCF_000374545.1 PRJNA224116 SAMN02440443 ARGA00000000.1 reference genome 1120992 81464 Anaeromusa acidaminophila DSM 3853 strain=DSM 3853 na latest Scaffold Major Full 2013-04-23 ASM37454v1 DOE Joint Genome Institute GCA_000374545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/545/GCF_000374545.1_ASM37454v1/ na assembly from type material na haploid bacteria 3475815 3472856 49.000000 0 61 64 NCBI RefSeq GCF_000374545.1-RS_2026_04_07 2026-04-07 3397 3312 68 na GCF_000374565.1 PRJNA224116 SAMN02441018 ARGB00000000.1 reference genome 1121090 254759 Siminovitchia fordii DSM 16014 = CIP 108821 strain=DSM 16014 na latest Scaffold Major Full 2013-04-23 ASM37456v1 DOE Joint Genome Institute GCA_000374565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/565/GCF_000374565.1_ASM37456v1/ na assembly from type material na haploid bacteria 4509444 4506100 41.000000 0 45 54 NCBI RefSeq GCF_000374565.1-RS_2026_05_02 2026-05-02 4437 4258 80 na GCF_000374585.1 PRJNA224116 SAMN02441019 ARGC00000000.1 reference genome 1121094 376804 Phocaeicola barnesiae DSM 18169 = JCM 13652 strain=DSM 18169 na latest Scaffold Major Full 2013-04-23 ASM37458v1 DOE Joint Genome Institute GCA_000374585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/585/GCF_000374585.1_ASM37458v1/ na assembly from type material na haploid bacteria 3619906 3617816 47.000000 0 42 47 NCBI RefSeq GCF_000374585.1-RS_2026_04_26 2026-04-26 3046 2881 85 na GCF_000374605.1 PRJNA224116 SAMN02440444 ARGD00000000.1 na 1121102 827 Campylobacter ureolyticus DSM 20703 strain=DSM 20703 na latest Scaffold Major Full 2013-04-23 ASM37460v1 DOE Joint Genome Institute GCA_000374605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/605/GCF_000374605.1_ASM37460v1/ na assembly from type material na haploid bacteria 1740590 1740135 29.000000 0 35 37 NCBI RefSeq GCF_000374605.1-RS_2026_02_18 2026-02-18 1839 1767 49 na GCF_000374625.1 PRJNA224116 SAMN02441699 ARGE00000000.1 reference genome 1121116 491919 Allobrachymonas chironomi DSM 19884 strain=DSM 19884 na latest Scaffold Major Full 2013-04-23 ASM37462v1 DOE Joint Genome Institute GCA_000374625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/625/GCF_000374625.1_ASM37462v1/ na assembly from type material na haploid bacteria 2503561 2501275 63.500000 0 35 36 NCBI RefSeq GCF_000374625.1-RS_2026_05_02 2026-05-02 2453 2362 54 26203340 GCF_000374645.1 PRJNA224116 SAMN02441700 ARGF00000000.1 reference genome 1121016 2369 Arhodomonas aquaeolei DSM 8974 strain=DSM 8974 na latest Scaffold Major Full 2013-04-23 ASM37464v1 DOE Joint Genome Institute GCA_000374645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/645/GCF_000374645.1_ASM37464v1/ na assembly from type material na haploid bacteria 3957769 3953047 69.500000 0 48 60 NCBI RefSeq GCF_000374645.1-RS_2026_05_02 2026-05-02 3614 3537 58 na GCF_000374665.1 PRJNA224116 SAMN02440445 ARGG00000000.1 na 1137263 1137263 Salinispora fenicalii strain=CNR-942 na latest Scaffold Major Full 2013-04-23 ASM37466v1 DOE Joint Genome Institute GCA_000374665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/665/GCF_000374665.1_ASM37466v1/ na na na haploid bacteria 5473304 5470009 69.000000 0 52 60 NCBI RefSeq GCF_000374665.1-RS_2026_05_12 2026-05-12 5120 4808 86 na GCF_000374685.1 PRJNA224116 SAMN02441701 ARGH00000000.1 na 1169182 351187 Salinispora pacifica CNS055 strain=CNS055 na latest Scaffold Major Full 2013-04-23 ASM37468v1 DOE Joint Genome Institute GCA_000374685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/685/GCF_000374685.1_ASM37468v1/ na na na haploid bacteria 5263298 5257573 70.000000 0 62 74 NCBI RefSeq GCF_000374685.1-RS_2026_05_12 2026-05-12 4862 4623 70 na GCF_000374705.1 PRJNA224116 SAMN02441020 ARGI00000000.1 na 1169186 351187 Salinispora pacifica CNS860 strain=CNS860 na latest Scaffold Major Full 2013-04-23 ASM37470v1 DOE Joint Genome Institute GCA_000374705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/705/GCF_000374705.1_ASM37470v1/ na na na haploid bacteria 5357469 5351008 69.500000 0 62 72 NCBI RefSeq GCF_000374705.1-RS_2026_05_12 2026-05-12 5040 4745 63 na GCF_000374725.1 PRJNA224116 SAMN02441365 ARGJ00000000.1 na 999542 351187 Salinispora pacifica DSM 45543 = CNS-863 strain=CNS-863 na latest Scaffold Major Full 2013-04-23 ASM37472v1 DOE Joint Genome Institute GCA_000374725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/725/GCF_000374725.1_ASM37472v1/ na na na haploid bacteria 5438612 5436333 69.500000 0 70 77 NCBI RefSeq GCF_000374725.1-RS_2026_05_12 2026-05-12 5112 4821 62 na GCF_000374745.1 PRJNA224116 SAMN02441021 ARGK00000000.1 na 1169189 351187 Salinispora pacifica CNS996 strain=CNS996 na latest Scaffold Major Full 2013-04-23 ASM37474v1 DOE Joint Genome Institute GCA_000374745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/745/GCF_000374745.1_ASM37474v1/ na na na haploid bacteria 5661283 5658754 69.500000 0 113 119 NCBI RefSeq GCF_000374745.1-RS_2026_05_12 2026-05-12 5348 4991 57 na GCF_000374765.1 PRJNA224116 SAMN02441366 ARGL00000000.1 na 1169190 351187 Salinispora pacifica CNT045 strain=CNT045 na latest Scaffold Major Full 2013-04-23 ASM37476v1 DOE Joint Genome Institute GCA_000374765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/765/GCF_000374765.1_ASM37476v1/ na na na haploid bacteria 5771968 5768959 69.500000 0 80 90 NCBI RefSeq GCF_000374765.1-RS_2026_05_12 2026-05-12 5415 5060 60 na GCF_000374785.1 PRJNA224116 SAMN02441686 ARGM00000000.1 na 1169188 351187 Salinispora pacifica CNT124 strain=CNT124 na latest Scaffold Major Full 2013-04-23 ASM37478v1 DOE Joint Genome Institute GCA_000374785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/785/GCF_000374785.1_ASM37478v1/ na na na haploid bacteria 5164130 5160007 70.000000 0 47 55 NCBI RefSeq GCF_000374785.1-RS_2026_05_12 2026-05-12 4814 4524 63 na GCF_000374805.1 PRJNA224116 SAMN02441687 ARGN00000000.1 reference genome 1121280 553088 Chitiniphilus shinanonensis DSM 23277 strain=DSM 23277 na latest Scaffold Major Full 2013-04-23 ASM37480v1 DOE Joint Genome Institute GCA_000374805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/805/GCF_000374805.1_ASM37480v1/ na assembly from type material na haploid bacteria 4151628 4148795 66.500000 0 42 51 NCBI RefSeq GCF_000374805.1-RS_2025_09_02 2025-09-02 3791 3701 61 na GCF_000374825.1 PRJNA224116 SAMN02441367 ARGO00000000.1 reference genome 1122925 225906 Paenibacillus sanguinis 2301083 = DSM 16941 strain=DSM 16941 na latest Scaffold Major Full 2013-04-23 ASM37482v1 DOE Joint Genome Institute GCA_000374825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/825/GCF_000374825.1_ASM37482v1/ na assembly from type material na haploid bacteria 4804136 4803366 49.500000 0 36 38 NCBI RefSeq GCF_000374825.1-RS_2026_03_30 2026-03-30 4472 4317 93 na GCF_000374845.1 PRJNA224116 SAMN02440446 ARGP00000000.1 reference genome 1122927 369333 Paenibacillus terrigena DSM 21567 strain=DSM 21567 na latest Scaffold Major Full 2013-04-23 ASM37484v1 DOE Joint Genome Institute GCA_000374845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/845/GCF_000374845.1_ASM37484v1/ na assembly from type material na haploid bacteria 6361561 6361361 46.000000 0 40 42 NCBI RefSeq GCF_000374845.1-RS_2026_05_02 2026-05-02 5928 5759 93 na GCF_000374865.1 PRJNA224116 SAMN02441688 ARGQ00000000.1 na 1158050 1158050 Arthrobacter sp. 135MFCol5.1 strain=135MFCol5.1 na latest Scaffold Major Full 2013-04-23 ASM37486v1 DOE Joint Genome Institute GCA_000374865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/865/GCF_000374865.1_ASM37486v1/ na na na haploid bacteria 4453574 4453474 66.000000 0 36 37 NCBI RefSeq GCF_000374865.1-RS_2025_08_25 2025-08-25 4131 4020 60 na GCF_000374885.1 PRJNA224116 SAMN02441689 ARGR00000000.1 na 1151120 1151120 Bacillus sp. 105MF strain=105MF na latest Scaffold Major Full 2013-04-23 ASM37488v1 DOE Joint Genome Institute GCA_000374885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/885/GCF_000374885.1_ASM37488v1/ na na na haploid bacteria 5821940 5818490 35.500000 0 125 133 NCBI RefSeq GCF_000374885.1-RS_2025_08_25 2025-08-25 6132 5581 103 na GCF_000374905.1 PRJNA224116 SAMN02441368 ARGS00000000.1 na 1151119 1151119 Arthrobacter sp. 162MFSha1.1 strain=162MFSha1.1 na latest Scaffold Major Full 2013-04-23 ASM37490v1 DOE Joint Genome Institute GCA_000374905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/905/GCF_000374905.1_ASM37490v1/ na na na haploid bacteria 4399171 4398971 66.000000 0 53 55 NCBI RefSeq GCF_000374905.1-RS_2025_08_25 2025-08-25 4165 4059 62 na GCF_000374925.1 PRJNA224116 SAMN02441022 ARGT00000000.1 na 1157944 1157944 Arthrobacter sp. 131MFCol6.1 strain=131MFCol6.1 na latest Scaffold Major Full 2013-04-23 ASM37492v1 DOE Joint Genome Institute GCA_000374925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/925/GCF_000374925.1_ASM37492v1/ na na na haploid bacteria 4432383 4431768 67.000000 0 24 29 NCBI RefSeq GCF_000374925.1-RS_2025_08_25 2025-08-25 4014 3928 60 na GCF_000374965.1 PRJNA224116 SAMN02440448 ARGV00000000.1 na 1151121 1151121 Bacillus sp. 95MFCvi2.1 strain=95MFCvi2.1 na latest Scaffold Major Full 2013-04-23 ASM37496v1 DOE Joint Genome Institute GCA_000374965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/965/GCF_000374965.1_ASM37496v1/ na na na haploid bacteria 5673295 5671070 35.500000 0 93 96 NCBI RefSeq GCF_000374965.1-RS_2025_08_25 2025-08-25 5956 5476 78 na GCF_000374985.1 PRJNA224116 SAMN02441007 ARGW00000000.1 na 1169151 1169151 Micromonospora sp. CNB394 strain=CNB394 na latest Scaffold Major Full 2013-04-23 ASM37498v1 DOE Joint Genome Institute GCA_000374985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/374/985/GCF_000374985.1_ASM37498v1/ na na na haploid bacteria 6344798 6340679 72.500000 0 85 93 NCBI RefSeq GCF_000374985.1-RS_2024_08_13 2024-08-13 5855 5645 64 na GCF_000375005.1 PRJNA224116 SAMN02441369 ARGX00000000.1 na 1169178 168697 Salinispora arenicola CNS051 strain=CNS051 na latest Scaffold Major Full 2013-04-23 ASM37500v1 DOE Joint Genome Institute GCA_000375005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/005/GCF_000375005.1_ASM37500v1/ na na na haploid bacteria 5853040 5852495 69.500000 0 93 95 NCBI RefSeq GCF_000375005.1-RS_2026_01_30 2026-01-30 5302 5050 65 na GCF_000375025.1 PRJNA224116 SAMN02440449 ARGY00000000.1 na 1169170 168697 Salinispora arenicola CNP193 strain=CNP193 na latest Scaffold Major Full 2013-04-23 ASM37502v1 DOE Joint Genome Institute GCA_000375025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/025/GCF_000375025.1_ASM37502v1/ na na na haploid bacteria 5766351 5766051 69.500000 0 79 82 NCBI RefSeq GCF_000375025.1-RS_2026_05_12 2026-05-12 5323 5002 65 na GCF_000375045.1 PRJNA224116 SAMN02440450 ARGZ00000000.1 na 1169174 168697 Salinispora arenicola CNP105 strain=CNP105 na latest Scaffold Major Full 2013-04-23 ASM37504v1 DOE Joint Genome Institute GCA_000375045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/045/GCF_000375045.1_ASM37504v1/ na na na haploid bacteria 5919675 5911320 69.500000 0 69 82 NCBI RefSeq GCF_000375045.1-RS_2026_05_12 2026-05-12 5422 5104 65 na GCF_000375065.1 PRJNA224116 SAMN02441690 ARHA00000000.1 na 1169168 168697 Salinispora arenicola CNS744 strain=CNS744 na latest Scaffold Major Full 2013-04-23 ASM37506v1 DOE Joint Genome Institute GCA_000375065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/065/GCF_000375065.1_ASM37506v1/ na na na haploid bacteria 5741573 5739087 69.500000 0 89 95 NCBI RefSeq GCF_000375065.1-RS_2025_08_25 2025-08-25 5250 5005 62 na GCF_000375085.1 PRJNA224116 SAMN02441354 ARHB00000000.1 na 1169169 168697 Salinispora arenicola CNX481 strain=CNX481 na latest Scaffold Major Full 2013-04-23 ASM37508v1 DOE Joint Genome Institute GCA_000375085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/085/GCF_000375085.1_ASM37508v1/ na na na haploid bacteria 5570975 5568256 69.500000 0 73 81 NCBI RefSeq GCF_000375085.1-RS_2026_05_12 2026-05-12 5085 4830 61 na GCF_000375105.1 PRJNA224116 SAMN02441691 ARHC00000000.1 na 1169171 168697 Salinispora arenicola CNX814 strain=CNX814 na latest Scaffold Major Full 2013-04-23 ASM37510v1 DOE Joint Genome Institute GCA_000375105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/105/GCF_000375105.1_ASM37510v1/ na na na haploid bacteria 5688460 5683824 69.500000 0 65 74 NCBI RefSeq GCF_000375105.1-RS_2026_05_12 2026-05-12 5175 4927 65 na GCF_000375125.1 PRJNA224116 SAMN02441008 ARHD00000000.1 na 1169162 168697 Salinispora arenicola CNY011 strain=CNY011 na latest Scaffold Major Full 2013-04-23 ASM37512v1 DOE Joint Genome Institute GCA_000375125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/125/GCF_000375125.1_ASM37512v1/ na na na haploid bacteria 5722126 5720440 69.500000 0 82 89 NCBI RefSeq GCF_000375125.1-RS_2026_01_30 2026-01-30 5163 4866 66 na GCF_000375145.1 PRJNA224116 SAMN02441009 ARHE00000000.1 na 1169179 168697 Salinispora arenicola CNY231 strain=CNY231 na latest Scaffold Major Full 2013-04-23 ASM37514v1 DOE Joint Genome Institute GCA_000375145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/145/GCF_000375145.1_ASM37514v1/ na na na haploid bacteria 5832889 5830346 69.500000 0 69 76 NCBI RefSeq GCF_000375145.1-RS_2026_05_12 2026-05-12 5251 5017 60 na GCF_000375165.1 PRJNA224116 SAMN02441355 ARHF00000000.1 na 1169166 168697 Salinispora arenicola CNY256 strain=CNY256 na latest Scaffold Major Full 2013-04-23 ASM37516v1 DOE Joint Genome Institute GCA_000375165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/165/GCF_000375165.1_ASM37516v1/ na na na haploid bacteria 5781119 5780035 69.500000 0 79 87 NCBI RefSeq GCF_000375165.1-RS_2026_05_12 2026-05-12 5261 5028 64 na GCF_000375185.1 PRJNA224116 SAMN02441356 ARHG00000000.1 na 1169177 168697 Salinispora arenicola CNY260 strain=CNY260 na latest Scaffold Major Full 2013-04-23 ASM37518v1 DOE Joint Genome Institute GCA_000375185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/185/GCF_000375185.1_ASM37518v1/ na na na haploid bacteria 5775769 5771444 69.500000 0 63 73 NCBI RefSeq GCF_000375185.1-RS_2026_05_12 2026-05-12 5263 5028 64 na GCF_000375205.1 PRJNA224116 SAMN02440451 ARHH00000000.1 na 1169173 168697 Salinispora arenicola CNY280 strain=CNY280 na latest Scaffold Major Full 2013-04-23 ASM37520v1 DOE Joint Genome Institute GCA_000375205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/205/GCF_000375205.1_ASM37520v1/ na na na haploid bacteria 6066372 6064982 69.500000 0 89 94 NCBI RefSeq GCF_000375205.1-RS_2026_05_12 2026-05-12 5583 5266 92 na GCF_000375225.1 PRJNA224116 SAMN02440452 ARHI00000000.1 na 1169193 351187 Salinispora pacifica CNQ768 strain=CNQ768 na latest Scaffold Major Full 2013-04-23 ASM37522v1 DOE Joint Genome Institute GCA_000375225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/225/GCF_000375225.1_ASM37522v1/ na na na haploid bacteria 5480836 5478856 70.000000 0 91 98 NCBI RefSeq GCF_000375225.1-RS_2026_05_12 2026-05-12 5127 4879 60 na GCF_000375245.1 PRJNA224116 SAMN02441357 ARHJ00000000.1 na 1169191 351187 Salinispora pacifica CNT584 strain=CNT584 na latest Scaffold Major Full 2013-04-23 ASM37524v1 DOE Joint Genome Institute GCA_000375245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/245/GCF_000375245.1_ASM37524v1/ na na na haploid bacteria 5217717 5216172 69.500000 0 79 83 NCBI RefSeq GCF_000375245.1-RS_2026_05_12 2026-05-12 4923 4629 64 na GCF_000375265.1 PRJNA224116 SAMN02441358 ARHK00000000.1 na 1169184 351187 Salinispora pacifica CNT609 strain=CNT609 na latest Scaffold Major Full 2013-04-23 ASM37526v1 DOE Joint Genome Institute GCA_000375265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/265/GCF_000375265.1_ASM37526v1/ na na na haploid bacteria 5328928 5325580 69.500000 0 95 105 NCBI RefSeq GCF_000375265.1-RS_2026_05_12 2026-05-12 5117 4737 63 na GCF_000375285.1 PRJNA224116 SAMN02441010 ARHL00000000.1 na 1169180 351187 Salinispora pacifica CNT851 strain=CNT851 na latest Scaffold Major Full 2013-04-23 ASM37528v1 DOE Joint Genome Institute GCA_000375285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/285/GCF_000375285.1_ASM37528v1/ na na na haploid bacteria 5263032 5259864 70.000000 0 100 106 NCBI RefSeq GCF_000375285.1-RS_2026_05_12 2026-05-12 4965 4625 60 na GCF_000375305.1 PRJNA224116 SAMN02441692 ARHM00000000.1 na 1169185 168697 Salinispora arenicola CNY237 strain=CNY237 na latest Scaffold Major Full 2013-04-23 ASM37530v1 DOE Joint Genome Institute GCA_000375305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/305/GCF_000375305.1_ASM37530v1/ na na na haploid bacteria 5713643 5710116 69.500000 0 67 75 NCBI RefSeq GCF_000375305.1-RS_2026_05_12 2026-05-12 5236 5011 64 na GCF_000375345.1 PRJNA224116 SAMN02441394 AQXD00000000.1 na 1123502 400946 Wohlfahrtiimonas chitiniclastica DSM 18708 strain=DSM 18708 na latest Contig Major Full 2013-04-20 ASM37534v1 DOE Joint Genome Institute GCA_000375345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/345/GCF_000375345.1_ASM37534v1/ na assembly from type material na haploid bacteria 1991020 1991020 44.000000 0 7 7 NCBI RefSeq GCF_000375345.1-RS_2026_05_16 2026-05-16 1900 1838 53 na GCF_000375365.1 PRJNA224116 SAMN02441393 AQXB00000000.1 reference genome 1121365 161890 Corynebacterium mastitidis DSM 44356 strain=DSM 44356 na latest Contig Major Full 2013-04-20 ASM37536v1 DOE Joint Genome Institute GCA_000375365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/365/GCF_000375365.1_ASM37536v1/ na assembly from type material na haploid bacteria 2370005 2370005 69.000000 0 39 39 NCBI RefSeq GCF_000375365.1-RS_2026_04_26 2026-04-26 2327 2246 55 na GCF_000375405.1 PRJNA224116 SAMN02441390 AQWS00000000.1 reference genome 1121099 392838 Bacteroides propionicifaciens DSM 19291 = JCM 14649 strain=DSM 19291 na latest Contig Major Full 2013-04-20 ASM37540v1 DOE Joint Genome Institute GCA_000375405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/405/GCF_000375405.1_ASM37540v1/ na assembly from type material na haploid bacteria 2634691 2634691 38.000000 0 72 72 NCBI RefSeq GCF_000375405.1-RS_2026_04_26 2026-04-26 2300 2181 60 na GCF_000375425.1 PRJNA224116 SAMN02440412 AQXG00000000.1 reference genome 1121930 454600 Gracilimonas tropica DSM 19535 strain=DSM 19535 na latest Contig Major Full 2013-04-20 ASM37542v1 DOE Joint Genome Institute GCA_000375425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/425/GCF_000375425.1_ASM37542v1/ na assembly from type material na haploid bacteria 3831242 3831242 43.000000 0 48 48 NCBI RefSeq GCF_000375425.1-RS_2026_05_02 2026-05-02 3368 3302 52 na GCF_000375445.1 PRJNA224116 SAMN02441732 AQWK00000000.1 na 983920 378548 Novosphingobium nitrogenifigens DSM 19370 strain=DSM 19370 na latest Contig Major Full 2013-04-20 ASM37544v1 DOE Joint Genome Institute GCA_000375445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/445/GCF_000375445.1_ASM37544v1/ na assembly from type material na haploid bacteria 4148973 4148973 64.000000 0 48 48 NCBI RefSeq GCF_000375445.1-RS_2026_05_16 2026-05-16 3808 3699 57 na GCF_000375465.1 PRJNA224116 SAMN02440413 AQXH00000000.1 reference genome 1121104 287535 Balneola vulgaris DSM 17893 strain=DSM 17893 na latest Contig Major Full 2013-04-20 ASM37546v1 DOE Joint Genome Institute GCA_000375465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/465/GCF_000375465.1_ASM37546v1/ na assembly from type material na haploid bacteria 2857749 2857749 40.000000 0 18 18 NCBI RefSeq GCF_000375465.1-RS_2026_03_30 2026-03-30 2500 2441 56 na GCF_000375485.1 PRJNA224116 SAMN02441051 AQXE00000000.1 reference genome 1121459 63560 Desulfovibrio oxyclinae DSM 11498 strain=DSM 11498 na latest Contig Major Full 2013-04-20 ASM37548v1 DOE Joint Genome Institute GCA_000375485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/485/GCF_000375485.1_ASM37548v1/ na assembly from type material na haploid bacteria 3324581 3324581 59.000000 0 32 32 NCBI RefSeq GCF_000375485.1-RS_2026_05_02 2026-05-02 3138 3065 62 na GCF_000375505.1 PRJNA224116 SAMN02441733 AQWT00000000.1 na 1123310 1309 Streptococcus mutans DSM 20523 strain=DSM 20523 na latest Contig Major Full 2013-04-20 ASM37550v1 DOE Joint Genome Institute GCA_000375505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/505/GCF_000375505.1_ASM37550v1/ na assembly from type material na haploid bacteria 1988767 1988767 36.500000 0 20 20 NCBI RefSeq GCF_000375505.1-RS_2026_05_16 2026-05-16 1984 1863 50 na GCF_000375525.1 PRJNA224116 SAMN02441734 AQXC00000000.1 na 1121367 43769 Corynebacterium propinquum DSM 44285 strain=DSM 44285 na latest Contig Major Full 2013-04-20 ASM37552v1 DOE Joint Genome Institute GCA_000375525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/525/GCF_000375525.1_ASM37552v1/ na assembly from type material na haploid bacteria 2458635 2458635 56.500000 0 22 22 NCBI RefSeq GCF_000375525.1-RS_2026_04_23 2026-04-23 2245 2128 53 na GCF_000375545.1 PRJNA224116 SAMN02441395 AQXF00000000.1 reference genome 1122137 288022 Kordiimonas gwangyangensis DSM 19435 = JCM 12864 strain=DSM 19435 na latest Contig Major Full 2013-04-20 ASM37554v1 DOE Joint Genome Institute GCA_000375545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/545/GCF_000375545.1_ASM37554v1/ na assembly from type material na haploid bacteria 4082245 4082245 57.500000 0 13 13 NCBI RefSeq GCF_000375545.1-RS_2026_04_26 2026-04-26 3734 3660 52 na GCF_000375585.1 PRJNA224116 SAMN02440409 AQWP00000000.1 na 1041151 382 Sinorhizobium meliloti 4H41 strain=4H41 na latest Contig Major Full 2013-04-20 ASM37558v1 DOE Joint Genome Institute GCA_000375585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/585/GCF_000375585.1_ASM37558v1/ na na na haploid bacteria 6795637 6795637 62.000000 0 47 47 NCBI RefSeq GCF_000375585.1-RS_2025_05_21 2025-05-21 6392 6146 55 26380038 GCF_000375625.1 PRJNA224116 SAMN02440408 AQWO00000000.1 na 1157640 1157640 Streptomyces sp. FxanaC1 strain=FxanaC1 na latest Contig Major Full 2013-04-20 ASM37562v1 DOE Joint Genome Institute GCA_000375625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/625/GCF_000375625.1_ASM37562v1/ na na na haploid bacteria 7846427 7846427 71.000000 0 63 63 NCBI RefSeq GCF_000375625.1-RS_2025_03_25 2025-03-25 6930 6714 80 na GCF_000375645.1 PRJNA224116 SAMN02441061 AQWR00000000.1 reference genome 1122971 501496 Porphyromonas bennonis DSM 23058 = JCM 16335 strain=DSM 23058 na latest Contig Major Full 2013-04-20 ASM37564v1 DOE Joint Genome Institute GCA_000375645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/645/GCF_000375645.1_ASM37564v1/ na assembly from type material na haploid bacteria 2023236 2023236 56.500000 0 87 87 NCBI RefSeq GCF_000375645.1-RS_2026_05_02 2026-05-02 1651 1581 47 na GCF_000375725.1 PRJNA224116 SAMN02441060 AQWQ00000000.1 na 1157632 1157632 Streptomyces sp. LaPpAH-95 strain=LaPpAH-95 na latest Contig Major Full 2013-04-20 ASM37572v1 DOE Joint Genome Institute GCA_000375725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/375/725/GCF_000375725.1_ASM37572v1/ na na na haploid bacteria 7564593 7564593 72.000000 0 34 34 NCBI RefSeq GCF_000375725.1-RS_2025_03_25 2025-03-25 6802 6639 78 na GCF_000376105.1 PRJNA224116 SAMN02440406 AQWM00000000.1 reference genome 1121022 347481 Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 strain=DSM 16100 na latest Contig Major Full 2013-04-20 ASM37610v1 DOE Joint Genome Institute GCA_000376105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/105/GCF_000376105.1_ASM37610v1/ na assembly from type material na haploid bacteria 4987073 4987073 58.500000 0 100 100 NCBI RefSeq GCF_000376105.1-RS_2026_04_26 2026-04-26 4615 4498 52 na GCF_000376125.1 PRJNA224116 SAMN02441730 AQWH00000000.1 na 1122214 293089 Martelella mediterranea DSM 17316 strain=MACL11 na latest Contig Major Full 2013-04-20 ASM37612v1 DOE Joint Genome Institute GCA_000376125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/125/GCF_000376125.1_ASM37612v1/ na assembly from type material na haploid bacteria 5643744 5643744 62.500000 0 75 75 NCBI RefSeq GCF_000376125.1-RS_2026_01_27 2026-01-27 5323 5155 55 na GCF_000376225.1 PRJNA224116 SAMN02441735 AQXL00000000.1 reference genome 1120973 232270 Effusibacillus pohliae DSM 22757 strain=DSM 22757 na latest Contig Major Full 2013-04-20 ASM37622v1 DOE Joint Genome Institute GCA_000376225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/225/GCF_000376225.1_ASM37622v1/ na assembly from type material na haploid bacteria 3363524 3363524 55.000000 0 135 135 NCBI RefSeq GCF_000376225.1-RS_2025_12_10 2025-12-10 3572 3375 86 na GCF_000376245.1 PRJNA224116 SAMN02441381 AQXM00000000.1 reference genome 1120917 291968 Acaricomes phytoseiuli DSM 14247 strain=DSM 14247 na latest Contig Major Full 2013-04-20 ASM37624v1 DOE Joint Genome Institute GCA_000376245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/245/GCF_000376245.1_ASM37624v1/ na assembly from type material na haploid bacteria 2419519 2419519 62.500000 0 64 64 NCBI RefSeq GCF_000376245.1-RS_2026_05_02 2026-05-02 2328 2220 54 na GCF_000376265.1 PRJNA224116 SAMN02440410 AQWU00000000.1 reference genome 1123388 88189 Thermus igniterrae ATCC 700962 strain=ATCC 700962 na latest Contig Major Full 2013-04-20 ASM37626v1 DOE Joint Genome Institute GCA_000376265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/265/GCF_000376265.1_ASM37626v1/ na assembly from type material na haploid bacteria 2225983 2225983 69.000000 0 74 74 NCBI RefSeq GCF_000376265.1-RS_2026_05_02 2026-05-02 2354 2255 53 na GCF_000376285.1 PRJNA224116 SAMN02441391 AQWV00000000.1 na 1121308 1496 Clostridioides difficile ATCC 9689 = DSM 1296 strain=ATCC 9689 na latest Contig Major Full 2013-04-20 ASM37628v1 DOE Joint Genome Institute GCA_000376285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/285/GCF_000376285.1_ASM37628v1/ na assembly from type material na haploid bacteria 4207674 4207674 28.500000 0 70 70 NCBI RefSeq GCF_000376285.1-RS_2026_03_01 2026-03-01 3961 3865 43 na GCF_000376325.1 PRJNA224116 SAMN02441382 AQXN00000000.1 na 1121268 200 Campylobacter curvus DSM 6644 strain=DSM 6644 na latest Contig Major Full 2013-04-20 ASM37632v1 DOE Joint Genome Institute GCA_000376325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/325/GCF_000376325.1_ASM37632v1/ na assembly from type material na haploid bacteria 1954904 1954904 44.500000 0 8 8 NCBI RefSeq GCF_000376325.1-RS_2025_12_23 2025-12-23 1968 1892 43 na GCF_000376345.1 PRJNA224116 SAMN02256484 AQVT00000000.1 na 1131813 1131813 Methylobacterium sp. 88A strain=88A na latest Contig Major Full 2013-04-20 ASM37634v1 DOE Joint Genome Institute GCA_000376345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/345/GCF_000376345.1_ASM37634v1/ na na na haploid bacteria 4889301 4889301 67.000000 0 4 4 NCBI RefSeq GCF_000376345.1-RS_2024_06_04 2024-06-04 4555 4420 71 na GCF_000376385.1 PRJNA224116 SAMN02440407 AQWN00000000.1 reference genome 1121472 265470 Desulfurispora thermophila DSM 16022 strain=DSM 16022 na latest Contig Major Full 2013-04-20 ASM37638v1 DOE Joint Genome Institute GCA_000376385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/385/GCF_000376385.1_ASM37638v1/ na assembly from type material na haploid bacteria 2821579 2821579 55.000000 0 19 19 NCBI RefSeq GCF_000376385.1-RS_2025_07_29 2025-07-29 2802 2711 65 na GCF_000376405.1 PRJNA224116 SAMN02441731 AQWJ00000000.1 na 742767 163665 Dysgonomonas mossii DSM 22836 strain=DSM 22836 na latest Contig Major Full 2013-04-20 ASM37640v1 DOE Joint Genome Institute GCA_000376405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/405/GCF_000376405.1_ASM37640v1/ na assembly from type material na haploid bacteria 3923801 3923801 37.500000 0 32 32 NCBI RefSeq GCF_000376405.1-RS_2026_03_31 2026-03-31 3370 3290 55 na GCF_000376425.1 PRJNA224116 SAMN02441059 AQWL00000000.1 na 1123392 36861 Thiobacillus denitrificans DSM 12475 strain=DSM 12475 na latest Contig Major Full 2013-04-20 ASM37642v1 DOE Joint Genome Institute GCA_000376425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/425/GCF_000376425.1_ASM37642v1/ na assembly from type material na haploid bacteria 3609948 3609948 62.500000 0 38 38 NCBI RefSeq GCF_000376425.1-RS_2026_03_12 2026-03-12 3689 3561 98 na GCF_000376445.1 PRJNA224116 SAMN02441396 AQXI00000000.1 na 797209 367189 Haladaptatus paucihalophilus DX253 strain=DX253 na latest Contig Major Full 2013-04-20 ASM37644v1 DOE Joint Genome Institute GCA_000376445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/445/GCF_000376445.1_ASM37644v1/ na assembly from type material na haploid archaea 4317540 4317540 62.000000 0 6 6 NCBI RefSeq GCF_000376445.1-RS_2025_12_03 2025-12-03 4435 4338 58 na GCF_000376505.2 PRJNA224116 SAMEA2272346 CAUR000000000.3 na 1294030 2039 Tropheryma whipplei str. Neuro14 strain=Neuro14 na latest Contig Major Full 2014-03-10 ASM37650v2 URMITE GCA_000376505.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/505/GCF_000376505.2_ASM37650v2/ na na na haploid bacteria 885853 885853 46.500000 0 154 154 NCBI RefSeq GCF_000376505.2-RS_2026_01_31 2026-01-31 866 807 48 na GCF_000376545.2 PRJNA224116 SAMN02471033 na reference genome 1265309 379347 Tritonibacter mobilis F1926 strain=F1926 na latest Complete Genome Major Full 2016-07-07 ASM37654v2 Technical University of Denmark, Department of Systems Biology GCA_000376545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/545/GCF_000376545.2_ASM37654v2/ na na na haploid bacteria 4830028 4830028 59.000000 5 5 5 NCBI RefSeq GCF_000376545.2-RS_2025_12_09 2025-12-09 4621 4492 72 na GCF_000376565.1 PRJNA224116 SAMD00041833 BARG00000000.1 reference genome 1306990 1306990 Streptomyces hokutonensis strain=R1-NS-10 na latest Contig Major Full 2013-04-12 ASM37656v1 National Institute of Technology and Evaluation GCA_000376565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/565/GCF_000376565.1_ASM37656v1/ na assembly from type material na haploid bacteria 11828360 11828360 70.500000 0 178 178 NCBI RefSeq GCF_000376565.1-RS_2025_08_08 2025-08-08 10902 10624 76 na GCF_000376585.1 PRJNA224116 SAMN02604272 na na 1236908 77038 Wolbachia endosymbiont of Drosophila simulans wNo strain=wNo na latest Complete Genome Major Full 2013-04-22 ASM37658v1 Uppsala University GCA_000376585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/585/GCF_000376585.1_ASM37658v1/ na na na haploid bacteria 1301823 1301823 34.000000 1 1 1 NCBI RefSeq GCF_000376585.1-RS_2026_01_08 2026-01-08 1225 1119 41 23593012 GCF_000376605.1 PRJNA224116 SAMN02604273 na reference genome 1236909 77038 Wolbachia endosymbiont of Drosophila simulans wHa strain=wHa na latest Complete Genome Major Full 2013-04-22 ASM37660v1 Uppsala University GCA_000376605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/605/GCF_000376605.1_ASM37660v1/ na na na haploid bacteria 1295804 1295804 35.000000 1 1 1 NCBI RefSeq GCF_000376605.1-RS_2026_01_08 2026-01-08 1198 1062 41 23593012 GCF_000376625.1 PRJNA224116 SAMN02603228 na na 1292033 2123 Mycoplasma putrefaciens Mput9231 strain=Mput9231 na latest Complete Genome Major Full 2013-04-22 ASM37662v1 EVOLMYCO GCA_000376625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/625/GCF_000376625.1_ASM37662v1/ na na na haploid bacteria 859996 859996 27.000000 1 1 1 NCBI RefSeq GCF_000376625.1-RS_2026_02_26 2026-02-26 751 706 39 23766410 GCF_000376645.1 PRJNA224116 SAMN02603277 na na 1316932 75985 Mannheimia haemolytica M42548 strain=M42548 na latest Complete Genome Major Full 2013-04-22 ASM37664v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000376645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/645/GCF_000376645.1_ASM37664v1/ na na na haploid bacteria 2731870 2731870 41.000000 1 1 1 NCBI RefSeq GCF_000376645.1-RS_2026_02_06 2026-02-06 2823 2648 85 23723408;25239467 GCF_000376665.1 PRJNA224116 SAMN01909280 na na 504728 277 Meiothermus ruber DSM 1279 strain=DSM 1279 na latest Chromosome Major Full 2013-04-22 ASM37666v1 Pacific Biosciences GCA_000376665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/665/GCF_000376665.1_ASM37666v1/ na assembly from type material na haploid bacteria 3098881 3098781 63.500000 1 1 1 NCBI RefSeq GCF_000376665.1-RS_2026_04_26 2026-04-26 3134 3052 56 na GCF_000376705.1 PRJNA224116 SAMN02604074 na na 1134454 1747 Cutibacterium acnes HL096PA1 strain=HL096PA1 na latest Complete Genome Major Full 2013-04-22 ASM37670v1 UCLA David Geffen School of Medicine GCA_000376705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/705/GCF_000376705.1_ASM37670v1/ na na na haploid bacteria 2549775 2549775 60.000000 2 2 2 NCBI RefSeq GCF_000376705.1-RS_2026_02_06 2026-02-06 2524 2404 58 23337890 GCF_000376745.1 PRJNA224116 SAMN01048198 AJRZ00000000.1 na 1131451 48664 Xanthomonas fragariae LMG 25863 strain=LMG 25863 na latest Contig Major Full 2013-04-22 ASM37674v1 Institute of Agricultural and Fisheries Research GCA_000376745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/745/GCF_000376745.1_ASM37674v1/ na na na haploid bacteria 4182545 4182545 62.000000 0 96 96 NCBI RefSeq GCF_000376745.1-RS_2026_05_07 2026-05-07 4051 3218 142 24274055 GCF_000376785.1 PRJNA224116 SAMN02440417 AQXX00000000.1 reference genome 1121935 286420 Hahella ganghwensis DSM 17046 strain=DSM 17046 na latest Contig Major Full 2013-04-22 ASM37678v1 DOE Joint Genome Institute GCA_000376785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/785/GCF_000376785.1_ASM37678v1/ na assembly from type material na haploid bacteria 6564965 6564965 49.000000 0 144 144 NCBI RefSeq GCF_000376785.1-RS_2026_05_02 2026-05-02 6089 5967 68 na GCF_000376805.1 PRJNA224116 SAMN02441054 AQXT00000000.1 reference genome 1121949 453851 Henriciella marina DSM 19595 strain=DSM 19595 na latest Contig Major Full 2013-04-22 ASM37680v1 DOE Joint Genome Institute GCA_000376805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/805/GCF_000376805.1_ASM37680v1/ na assembly from type material na haploid bacteria 3277765 3277765 60.000000 0 2 2 NCBI RefSeq GCF_000376805.1-RS_2025_12_09 2025-12-09 3230 3168 50 na GCF_000376825.1 PRJNA224116 SAMN02440416 AQXW00000000.1 reference genome 1121385 63959 Demetria terragena DSM 11295 strain=DSM 11295 na latest Contig Major Full 2013-04-22 ASM37682v1 DOE Joint Genome Institute GCA_000376825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/825/GCF_000376825.1_ASM37682v1/ na assembly from type material na haploid bacteria 3574772 3574772 64.500000 0 4 4 NCBI RefSeq GCF_000376825.1-RS_2026_05_02 2026-05-02 3449 3382 58 na GCF_000376845.1 PRJNA224116 SAMN02440418 AQXY00000000.1 na 1158168 1158168 Thioalkalivibrio sp. ALE14 strain=ALE14 na latest Contig Major Full 2013-04-22 ASM37684v1 DOE Joint Genome Institute GCA_000376845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/845/GCF_000376845.1_ASM37684v1/ na na na haploid bacteria 3024612 3024612 66.500000 0 31 31 NCBI RefSeq GCF_000376845.1-RS_2024_08_13 2024-08-13 2950 2833 52 na GCF_000376865.1 PRJNA224116 SAMN02441736 AQXQ00000000.1 na 1158756 1158756 Thioalkalivibrio sp. ALJ7 strain=ALJ7 na latest Contig Major Full 2013-04-22 ASM37686v1 DOE Joint Genome Institute GCA_000376865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/865/GCF_000376865.1_ASM37686v1/ na na na haploid bacteria 2712147 2712147 64.500000 0 12 12 NCBI RefSeq GCF_000376865.1-RS_2024_12_01 2024-12-01 2599 2508 52 na GCF_000376885.1 PRJNA224116 SAMN02441737 AQXR00000000.1 reference genome 1122228 356828 Alloscardovia criceti DSM 17774 strain=DSM 17774 na latest Contig Major Full 2013-04-22 ASM37688v1 DOE Joint Genome Institute GCA_000376885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/885/GCF_000376885.1_ASM37688v1/ na assembly from type material na haploid bacteria 1884654 1884654 50.000000 0 11 11 NCBI RefSeq GCF_000376885.1-RS_2025_12_09 2025-12-09 1567 1490 60 na GCF_000376905.1 PRJNA224116 SAMN02441053 AQXS00000000.1 na 1158154 1158154 Thioalkalivibrio sp. AKL6 strain=AKL6 na latest Contig Major Full 2013-04-22 ASM37690v1 DOE Joint Genome Institute GCA_000376905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/905/GCF_000376905.1_ASM37690v1/ na na na haploid bacteria 2836380 2836380 66.500000 0 11 11 NCBI RefSeq GCF_000376905.1-RS_2024_08_13 2024-08-13 2719 2626 55 na GCF_000376925.1 PRJNA224116 SAMN02441383 AQXP00000000.1 na 1158760 1158760 Thioalkalivibrio sp. ALJ11 strain=ALJ11 na latest Contig Major Full 2013-04-22 ASM37692v1 DOE Joint Genome Institute GCA_000376925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/925/GCF_000376925.1_ASM37692v1/ na na na haploid bacteria 2776911 2776911 66.000000 0 55 55 NCBI RefSeq GCF_000376925.1-RS_2024_08_13 2024-08-13 2639 2556 52 na GCF_000376945.1 PRJNA224116 SAMN02441384 AQXU00000000.1 reference genome 1122158 356662 Leeia oryzae DSM 17879 strain=DSM 17879 na latest Contig Major Full 2013-04-22 ASM37694v1 DOE Joint Genome Institute GCA_000376945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/945/GCF_000376945.1_ASM37694v1/ na assembly from type material na haploid bacteria 3785435 3785435 54.500000 0 25 25 NCBI RefSeq GCF_000376945.1-RS_2025_09_02 2025-09-02 3520 3448 61 na GCF_000376965.1 PRJNA224116 SAMN02440415 AQXV00000000.1 reference genome 523845 2186 Methanothermococcus thermolithotrophicus DSM 2095 strain=DSM 2095 na latest Contig Major Full 2013-04-22 ASM37696v1 DOE Joint Genome Institute GCA_000376965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/965/GCF_000376965.1_ASM37696v1/ na assembly from type material na haploid archaea 1686930 1686930 33.000000 0 55 55 NCBI RefSeq GCF_000376965.1-RS_2025_11_24 2025-11-24 1732 1669 41 na GCF_000376985.1 PRJNA224116 SAMN02441723 AQYA00000000.1 reference genome 1123304 439219 Streptococcus henryi DSM 19005 strain=DSM 19005 na latest Contig Major Full 2013-04-22 ASM37698v1 DOE Joint Genome Institute GCA_000376985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/376/985/GCF_000376985.1_ASM37698v1/ na assembly from type material na haploid bacteria 2422509 2422509 38.500000 0 37 37 NCBI RefSeq GCF_000376985.1-RS_2026_05_16 2026-05-16 2361 2255 36 na GCF_000377005.1 PRJNA224116 SAMN02441724 AQYB00000000.1 reference genome 1123309 229549 Streptococcus minor DSM 17118 strain=DSM 17118 na latest Contig Major Full 2013-04-22 ASM37700v1 DOE Joint Genome Institute GCA_000377005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/005/GCF_000377005.1_ASM37700v1/ na assembly from type material na haploid bacteria 1927889 1927889 41.000000 0 33 33 NCBI RefSeq GCF_000377005.1-RS_2026_05_02 2026-05-02 1970 1896 50 na GCF_000377025.1 PRJNA224116 SAMN02441359 ARHN00000000.1 na 1169192 351187 Salinispora pacifica CNY330 strain=CNY330 na latest Scaffold Major Full 2013-04-23 ASM37702v1 DOE Joint Genome Institute GCA_000377025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/025/GCF_000377025.1_ASM37702v1/ na na na haploid bacteria 5498479 5497524 70.000000 0 138 147 NCBI RefSeq GCF_000377025.1-RS_2026_05_12 2026-05-12 5119 4757 65 na GCF_000377045.1 PRJNA224116 SAMN02441693 ARHO00000000.1 na 1169181 351187 Salinispora pacifica CNY331 strain=CNY331 na latest Scaffold Major Full 2013-04-23 ASM37704v1 DOE Joint Genome Institute GCA_000377045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/045/GCF_000377045.1_ASM37704v1/ na na na haploid bacteria 5740370 5739427 70.000000 0 170 175 NCBI RefSeq GCF_000377045.1-RS_2026_05_12 2026-05-12 5335 4950 64 na GCF_000377065.1 PRJNA224116 SAMN02441011 ARHP00000000.1 na 1169198 168695 Salinispora tropica CNR699 strain=CNR699 na latest Scaffold Major Full 2013-04-23 ASM37706v1 DOE Joint Genome Institute GCA_000377065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/065/GCF_000377065.1_ASM37706v1/ na na na haploid bacteria 5608799 5607434 69.000000 0 124 132 NCBI RefSeq GCF_000377065.1-RS_2026_05_12 2026-05-12 5270 4987 63 na GCF_000377085.1 PRJNA224116 SAMN02441360 ARHQ00000000.1 na 1169195 168695 Salinispora tropica CNS416 strain=CNS416 na latest Scaffold Major Full 2013-04-23 ASM37708v1 DOE Joint Genome Institute GCA_000377085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/085/GCF_000377085.1_ASM37708v1/ na na na haploid bacteria 5180643 5179252 69.500000 0 95 101 NCBI RefSeq GCF_000377085.1-RS_2026_05_12 2026-05-12 4871 4591 65 na GCF_000377125.1 PRJNA224116 SAMN02440454 ARHS00000000.1 na 1169160 1169160 Streptomyces sp. CNS335 strain=CNS335 na latest Scaffold Major Full 2013-04-23 ASM37712v1 DOE Joint Genome Institute GCA_000377125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/125/GCF_000377125.1_ASM37712v1/ na na na haploid bacteria 8591972 8589372 73.500000 0 93 100 NCBI RefSeq GCF_000377125.1-RS_2026_05_12 2026-05-12 7373 7203 66 na GCF_000377145.1 PRJNA224116 SAMN02441678 ARHT00000000.1 na 1169154 1169154 Streptomyces sp. CNT372 strain=CNT372 na latest Scaffold Major Full 2013-04-23 ASM37714v1 DOE Joint Genome Institute GCA_000377145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/145/GCF_000377145.1_ASM37714v1/ na na na haploid bacteria 6456450 6455375 73.500000 0 40 44 NCBI RefSeq GCF_000377145.1-RS_2026_05_12 2026-05-12 5690 5473 74 na GCF_000377165.1 PRJNA224116 SAMN02441361 ARHU00000000.1 na 1169161 1169161 Streptomyces sp. CNY243 strain=CNY243 na latest Scaffold Major Full 2013-04-23 ASM37716v1 DOE Joint Genome Institute GCA_000377165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/165/GCF_000377165.1_ASM37716v1/ na na na haploid bacteria 8481985 8476426 73.500000 0 63 72 NCBI RefSeq GCF_000377165.1-RS_2026_05_12 2026-05-12 7232 7060 70 na GCF_000377185.1 PRJNA224116 SAMN02440455 ARHV00000000.1 na 1048680 1048680 Rhizobium sp. 42MFCr.1 strain=42MFCr.1 na latest Scaffold Major Full 2013-04-23 ASM37718v1 DOE Joint Genome Institute GCA_000377185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/185/GCF_000377185.1_ASM37718v1/ na na na haploid bacteria 6207487 6206117 60.000000 0 89 93 NCBI RefSeq GCF_000377185.1-RS_2025_08_25 2025-08-25 6101 5806 56 na GCF_000377205.1 PRJNA224116 SAMN02441679 ARHW00000000.1 na 1240557 1240557 Thioalkalivibrio sp. ALJ3 strain=ALJ3 na latest Scaffold Major Full 2013-04-23 ASM37720v1 DOE Joint Genome Institute GCA_000377205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/205/GCF_000377205.1_ASM37720v1/ na na na haploid bacteria 2629588 2629229 65.500000 0 12 14 NCBI RefSeq GCF_000377205.1-RS_2024_08_13 2024-08-13 2532 2458 57 na GCF_000377225.1 PRJNA224116 SAMN02441346 ARHX00000000.1 na 1240558 1240558 Thioalkalivibrio sp. ALJ4 strain=ALJ4 na latest Scaffold Major Full 2013-04-23 ASM37722v1 DOE Joint Genome Institute GCA_000377225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/225/GCF_000377225.1_ASM37722v1/ na na na haploid bacteria 2982358 2980993 65.500000 0 8 11 NCBI RefSeq GCF_000377225.1-RS_2024_08_13 2024-08-13 2845 2761 56 na GCF_000377245.1 PRJNA224116 SAMN02441012 ARHY00000000.1 na 1237929 1237929 Thioalkalivibrio sp. ALJ5 strain=ALJ5 na latest Scaffold Major Full 2013-04-23 ASM37724v1 DOE Joint Genome Institute GCA_000377245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/245/GCF_000377245.1_ASM37724v1/ na na na haploid bacteria 2983025 2981889 65.500000 0 10 12 NCBI RefSeq GCF_000377245.1-RS_2024_08_12 2024-08-12 2845 2761 56 na GCF_000377265.1 PRJNA224116 SAMN02441013 ARHZ00000000.1 na 1158148 1158148 Thioalkalivibrio sp. ARh3 strain=ARh3 na latest Scaffold Major Full 2013-04-23 ASM37726v1 DOE Joint Genome Institute GCA_000377265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/265/GCF_000377265.1_ASM37726v1/ na na na haploid bacteria 2788198 2787898 66.000000 0 15 18 NCBI RefSeq GCF_000377265.1-RS_2024_08_13 2024-08-13 2693 2611 55 na GCF_000377285.1 PRJNA224116 SAMN02441347 ARIA00000000.1 na 1158177 1158177 Thioalkalivibrio sp. ALE25 strain=ALE25 na latest Scaffold Major Full 2013-04-23 ASM37728v1 DOE Joint Genome Institute GCA_000377285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/285/GCF_000377285.1_ASM37728v1/ na na na haploid bacteria 2855242 2852947 67.000000 0 22 26 NCBI RefSeq GCF_000377285.1-RS_2024_08_13 2024-08-13 2767 2668 57 na GCF_000377305.1 PRJNA224116 SAMN02441014 ARIB00000000.1 na 1158759 1158759 Thioalkalivibrio sp. ALJ10 strain=ALJ10 na latest Scaffold Major Full 2013-04-23 ASM37730v1 DOE Joint Genome Institute GCA_000377305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/305/GCF_000377305.1_ASM37730v1/ na na na haploid bacteria 2644363 2644263 65.000000 0 14 15 NCBI RefSeq GCF_000377305.1-RS_2024_08_13 2024-08-13 2552 2475 57 na GCF_000377325.1 PRJNA224116 SAMN02441348 ARIC00000000.1 na 1239292 1239292 Thioalkalivibrio sp. ALgr3 strain=ALgr3 na latest Scaffold Major Full 2013-04-23 ASM37732v1 DOE Joint Genome Institute GCA_000377325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/325/GCF_000377325.1_ASM37732v1/ na na na haploid bacteria 2881569 2881469 67.500000 0 61 62 NCBI RefSeq GCF_000377325.1-RS_2024_08_13 2024-08-13 2822 2728 52 na GCF_000377345.1 PRJNA224116 SAMN02441680 ARID00000000.1 na 1158762 1158762 Thioalkalivibrio sp. ALJ16 strain=ALJ16 na latest Scaffold Major Full 2013-04-23 ASM37734v1 DOE Joint Genome Institute GCA_000377345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/345/GCF_000377345.1_ASM37734v1/ na na na haploid bacteria 2755057 2754857 67.000000 0 32 34 NCBI RefSeq GCF_000377345.1-RS_2024_08_13 2024-08-13 2659 2551 53 na GCF_000377385.1 PRJNA224116 SAMN02440999 ARIF00000000.1 na 1158757 1158757 Thioalkalivibrio sp. ALJ8 strain=ALJ8 na latest Scaffold Major Full 2013-04-23 ASM37738v1 DOE Joint Genome Institute GCA_000377385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/385/GCF_000377385.1_ASM37738v1/ na na na haploid bacteria 2817953 2816298 66.000000 0 7 13 NCBI RefSeq GCF_000377385.1-RS_2024_08_13 2024-08-13 2687 2612 52 na GCF_000377405.1 PRJNA224116 SAMN02441681 ARIG00000000.1 na 1158182 1158182 Thioalkalivibrio sp. ALE31 strain=ALE31 na latest Scaffold Major Full 2013-04-23 ASM37740v1 DOE Joint Genome Institute GCA_000377405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/405/GCF_000377405.1_ASM37740v1/ na na na haploid bacteria 2770361 2769803 67.500000 0 16 19 NCBI RefSeq GCF_000377405.1-RS_2024_08_13 2024-08-13 2666 2579 54 na GCF_000377425.1 PRJNA224116 SAMN02440456 ARIH00000000.1 na 1158179 1158179 Thioalkalivibrio sp. ALE28 strain=ALE28 na latest Scaffold Major Full 2013-04-23 ASM37742v1 DOE Joint Genome Institute GCA_000377425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/425/GCF_000377425.1_ASM37742v1/ na na na haploid bacteria 2910020 2909810 67.000000 0 29 31 NCBI RefSeq GCF_000377425.1-RS_2024_08_13 2024-08-13 2813 2717 52 na GCF_000377445.1 PRJNA224116 SAMN02441000 ARII00000000.1 na 1158169 1158169 Thioalkalivibrio sp. ALE9 strain=ALE9 na latest Scaffold Major Full 2013-04-23 ASM37744v1 DOE Joint Genome Institute GCA_000377445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/445/GCF_000377445.1_ASM37744v1/ na na na haploid bacteria 2938401 2937826 67.000000 0 24 26 NCBI RefSeq GCF_000377445.1-RS_2024_08_13 2024-08-13 2832 2738 52 na GCF_000377465.1 PRJNA224116 SAMN02441682 ARIJ00000000.1 na 1158181 1158181 Thioalkalivibrio sp. ALE30 strain=ALE30 na latest Scaffold Major Full 2013-04-23 ASM37746v1 DOE Joint Genome Institute GCA_000377465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/465/GCF_000377465.1_ASM37746v1/ na na na haploid bacteria 2779335 2779030 67.500000 0 17 18 NCBI RefSeq GCF_000377465.1-RS_2024_08_13 2024-08-13 2662 2582 53 na GCF_000377485.1 PRJNA224116 SAMN02440457 ARIK00000000.1 na 1158178 1158178 Thioalkalivibrio sp. ALE27 strain=ALE27 na latest Scaffold Major Full 2013-04-23 ASM37748v1 DOE Joint Genome Institute GCA_000377485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/485/GCF_000377485.1_ASM37748v1/ na na na haploid bacteria 2745684 2745254 67.500000 0 22 24 NCBI RefSeq GCF_000377485.1-RS_2024_08_13 2024-08-13 2661 2578 54 na GCF_000377505.1 PRJNA224116 SAMN02441001 ARIL00000000.1 reference genome 1122921 225917 Paenibacillus massiliensis 2301065 = DSM 16942 strain=DSM 16942 na latest Scaffold Major Full 2013-04-23 ASM37750v1 DOE Joint Genome Institute GCA_000377505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/505/GCF_000377505.1_ASM37750v1/ na assembly from type material na haploid bacteria 6385800 6384870 48.500000 0 36 38 NCBI RefSeq GCF_000377505.1-RS_2025_12_09 2025-12-09 5533 5367 112 na GCF_000377525.1 PRJNA224116 SAMN02441002 ARIM00000000.1 na 1169155 1169155 Streptomyces sp. CNT302 strain=CNT302 na latest Scaffold Major Full 2013-04-23 ASM37752v1 DOE Joint Genome Institute GCA_000377525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/525/GCF_000377525.1_ASM37752v1/ na na na haploid bacteria 7174271 7173291 72.500000 0 55 59 NCBI RefSeq GCF_000377525.1-RS_2026_05_12 2026-05-12 6212 6007 79 na GCF_000377545.1 PRJNA224116 SAMN02441350 ARIN00000000.1 na 1169159 1169159 Streptomyces sp. CNY228 strain=CNY228 na latest Scaffold Major Full 2013-04-23 ASM37754v1 DOE Joint Genome Institute GCA_000377545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/545/GCF_000377545.1_ASM37754v1/ na na na haploid bacteria 6959154 6957129 73.500000 0 49 51 NCBI RefSeq GCF_000377545.1-RS_2026_05_12 2026-05-12 6077 5936 74 na GCF_000377565.1 PRJNA224116 SAMN02441683 ARIO00000000.1 na 1246459 1246459 Rhizobium sp. 2MFCol3.1 strain=2MFCol3.1 na latest Scaffold Major Full 2013-04-23 ASM37756v1 DOE Joint Genome Institute GCA_000377565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/565/GCF_000377565.1_ASM37756v1/ na na na haploid bacteria 6550409 6549094 61.000000 0 44 46 NCBI RefSeq GCF_000377565.1-RS_2024_06_04 2024-06-04 6323 6184 56 na GCF_000377585.1 PRJNA224116 SAMN02440458 ARIP00000000.1 na 1150395 34073 Variovorax paradoxus 4MFCol3.1 strain=4MFCol3.1 na latest Scaffold Major Full 2013-04-23 ASM37758v1 DOE Joint Genome Institute GCA_000377585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/585/GCF_000377585.1_ASM37758v1/ na na na haploid bacteria 7011730 7011330 67.500000 0 67 71 NCBI RefSeq GCF_000377585.1-RS_2026_01_30 2026-01-30 6672 6551 50 na GCF_000377605.1 PRJNA224116 SAMN02440459 ARIQ00000000.1 na 1169163 168697 Salinispora arenicola CNT859 strain=CNT859 na latest Scaffold Major Full 2013-04-23 ASM37760v1 DOE Joint Genome Institute GCA_000377605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/605/GCF_000377605.1_ASM37760v1/ na na na haploid bacteria 5822487 5819312 69.500000 0 74 87 NCBI RefSeq GCF_000377605.1-RS_2026_01_30 2026-01-30 5304 5061 65 na GCF_000377625.1 PRJNA224116 SAMN02441351 ARIR00000000.1 na 1122993 28137 Prevotella veroralis DSM 19559 = JCM 6290 strain=DSM 19559 na latest Scaffold Major Full 2013-04-23 ASM37762v1 DOE Joint Genome Institute GCA_000377625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/625/GCF_000377625.1_ASM37762v1/ na assembly from type material na haploid bacteria 2845746 2842435 42.000000 0 28 31 NCBI RefSeq GCF_000377625.1-RS_2025_12_23 2025-12-23 2404 2288 59 na GCF_000377645.1 PRJNA224116 SAMN02441003 ARIS00000000.1 na 1158291 1158291 Thiomonas sp. FB-6 strain=FB-6 na latest Scaffold Major Full 2013-04-23 ASM37764v1 DOE Joint Genome Institute GCA_000377645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/645/GCF_000377645.1_ASM37764v1/ na na na haploid bacteria 4204671 4203216 70.000000 0 79 81 NCBI RefSeq GCF_000377645.1-RS_2024_08_13 2024-08-13 4030 3885 56 na GCF_000377665.1 PRJNA224116 SAMN02441684 ARIT00000000.1 reference genome 574966 1121960 Vreelandella zhanjiangensis DSM 21076 strain=DSM 21076 na latest Scaffold Major Full 2013-04-23 ASM37766v1 DOE Joint Genome Institute GCA_000377665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/665/GCF_000377665.1_ASM37766v1/ na assembly from type material na haploid bacteria 4058777 4056790 54.500000 0 16 18 NCBI RefSeq GCF_000377665.1-RS_2025_09_08 2025-09-08 3716 3634 72 na GCF_000377685.1 PRJNA224116 SAMN02440460 ARIU00000000.1 na 1122989 28135 Segatella oris DSM 18711 = JCM 12252 strain=DSM 18711 na latest Scaffold Major Full 2013-04-23 ASM37768v1 DOE Joint Genome Institute GCA_000377685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/685/GCF_000377685.1_ASM37768v1/ na assembly from type material na haploid bacteria 3063215 3061169 44.000000 0 46 53 NCBI RefSeq GCF_000377685.1-RS_2026_01_08 2026-01-08 2543 2408 59 na GCF_000377705.1 PRJNA224116 SAMN02441685 ARIV00000000.1 reference genome 1123239 427078 Salsuginibacillus kocurii DSM 18087 strain=DSM 18087 na latest Scaffold Major Full 2013-04-23 ASM37770v1 DOE Joint Genome Institute GCA_000377705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/705/GCF_000377705.1_ASM37770v1/ na assembly from type material na haploid bacteria 3831781 3831481 43.000000 0 23 26 NCBI RefSeq GCF_000377705.1-RS_2026_03_30 2026-03-30 3668 3557 70 na GCF_000377725.1 PRJNA224116 SAMN02440461 ARIW00000000.1 na 1151128 198618 Pseudomonas umsongensis 20MFCvi1.1 strain=20MFCvi1.1 na latest Scaffold Major Full 2013-04-23 ASM37772v1 DOE Joint Genome Institute GCA_000377725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/725/GCF_000377725.1_ASM37772v1/ na na na haploid bacteria 6458660 6455037 59.500000 0 27 31 NCBI RefSeq GCF_000377725.1-RS_2025_06_10 2025-06-10 5941 5772 68 na GCF_000377745.1 PRJNA224116 SAMN02441352 ARIX00000000.1 reference genome 1121921 396005 Gilvimarinus chinensis DSM 19667 strain=DSM 19667 na latest Scaffold Major Full 2013-04-23 ASM37774v1 DOE Joint Genome Institute GCA_000377745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/745/GCF_000377745.1_ASM37774v1/ na assembly from type material na haploid bacteria 4068866 4067804 51.000000 0 18 25 NCBI RefSeq GCF_000377745.1-RS_2026_05_02 2026-05-02 3645 3559 67 na GCF_000377765.1 PRJNA224116 SAMN02441353 ARIY00000000.1 reference genome 1121929 393087 Gracilibacillus lacisalsi DSM 19029 strain=DSM 19029 na latest Scaffold Major Full 2013-04-23 ASM37776v1 DOE Joint Genome Institute GCA_000377765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/765/GCF_000377765.1_ASM37776v1/ na assembly from type material na haploid bacteria 4409254 4408394 37.000000 0 44 51 NCBI RefSeq GCF_000377765.1-RS_2026_05_02 2026-05-02 4338 4228 70 na GCF_000377785.1 PRJNA224116 SAMN02441670 ARIZ00000000.1 na 545276 545276 Thioalkalivibrio sp. ALJ24 strain=ALJ24 na latest Scaffold Major Full 2013-04-23 ASM37778v1 DOE Joint Genome Institute GCA_000377785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/785/GCF_000377785.1_ASM37778v1/ na na na haploid bacteria 2814898 2812198 67.500000 0 20 26 NCBI RefSeq GCF_000377785.1-RS_2024_08_13 2024-08-13 2707 2613 54 na GCF_000377805.1 PRJNA224116 SAMN02441671 ARJA00000000.1 na 1158153 1158153 Thioalkalivibrio sp. AKL3 strain=AKL3 na latest Scaffold Major Full 2013-04-23 ASM37780v1 DOE Joint Genome Institute GCA_000377805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/805/GCF_000377805.1_ASM37780v1/ na na na haploid bacteria 2820283 2819998 66.500000 0 33 34 NCBI RefSeq GCF_000377805.1-RS_2024_08_13 2024-08-13 2747 2626 54 na GCF_000377825.1 PRJNA224116 SAMN02441338 ARJB00000000.1 na 1158157 1158157 Thioalkalivibrio sp. AKL9 strain=AKL9 na latest Scaffold Major Full 2013-04-23 ASM37782v1 DOE Joint Genome Institute GCA_000377825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/825/GCF_000377825.1_ASM37782v1/ na na na haploid bacteria 2822887 2822687 66.500000 0 29 31 NCBI RefSeq GCF_000377825.1-RS_2024_08_13 2024-08-13 2754 2633 54 na GCF_000377885.1 PRJNA224116 SAMN02441339 ARJE00000000.1 na 1158160 1158160 Thioalkalivibrio sp. AKL17 strain=AKL17 na latest Scaffold Major Full 2013-04-23 ASM37788v1 DOE Joint Genome Institute GCA_000377885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/885/GCF_000377885.1_ASM37788v1/ na na na haploid bacteria 2803222 2800809 67.500000 0 18 22 NCBI RefSeq GCF_000377885.1-RS_2024_08_22 2024-08-22 2698 2610 54 na GCF_000377905.1 PRJNA224116 SAMN02440463 ARJF00000000.1 na 1158165 1158165 Thioalkalivibrio sp. ALMg11 strain=ALMg11 na latest Scaffold Major Full 2013-04-23 ASM37790v1 DOE Joint Genome Institute GCA_000377905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/905/GCF_000377905.1_ASM37790v1/ na na na haploid bacteria 3037788 3037473 66.000000 0 18 20 NCBI RefSeq GCF_000377905.1-RS_2024_08_13 2024-08-13 2937 2828 53 na GCF_000377925.1 PRJNA224116 SAMN02441005 ARJG00000000.1 na 1158159 1158159 Thioalkalivibrio sp. AKL12 strain=AKL12 na latest Scaffold Major Full 2013-04-23 ASM37792v1 DOE Joint Genome Institute GCA_000377925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/925/GCF_000377925.1_ASM37792v1/ na na na haploid bacteria 2974796 2974696 66.000000 0 32 33 NCBI RefSeq GCF_000377925.1-RS_2024_08_13 2024-08-13 2824 2715 56 na GCF_000377945.1 PRJNA224116 SAMN02441672 ARJH00000000.1 na 1033854 1033854 Thioalkalivibrio sulfidiphilus strain=ALJ17 na latest Scaffold Major Full 2013-04-23 ASM37794v1 DOE Joint Genome Institute GCA_000377945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/945/GCF_000377945.1_ASM37794v1/ na na na haploid bacteria 3053023 3052463 65.000000 0 69 74 NCBI RefSeq GCF_000377945.1-RS_2025_03_13 2025-03-13 2990 2884 52 na GCF_000377965.1 PRJNA224116 SAMN02441673 ARJI00000000.1 na 1169156 1169156 Streptomyces sp. CNB091 strain=CNB091 na latest Scaffold Major Full 2013-04-23 ASM37796v1 DOE Joint Genome Institute GCA_000377965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/965/GCF_000377965.1_ASM37796v1/ na na na haploid bacteria 8228950 8227083 71.500000 0 50 57 NCBI RefSeq GCF_000377965.1-RS_2026_05_12 2026-05-12 7303 7025 78 na GCF_000377985.1 PRJNA224116 SAMN02440464 ARJJ00000000.1 na 1123284 444463 Sporolactobacillus vineae DSM 21990 = SL153 strain=DSM 21990 na latest Scaffold Major Full 2013-04-23 ASM37798v1 DOE Joint Genome Institute GCA_000377985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/377/985/GCF_000377985.1_ASM37798v1/ na assembly from type material na haploid bacteria 2862363 2858542 49.500000 0 45 48 NCBI RefSeq GCF_000377985.1-RS_2026_05_16 2026-05-16 2777 2681 63 na GCF_000378005.1 PRJNA224116 SAMN02440465 ARJK00000000.1 reference genome 1259795 108819 Coprothermobacter platensis DSM 11748 strain=DSM 11748 na latest Scaffold Major Full 2013-04-23 ASM37800v1 DOE Joint Genome Institute GCA_000378005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/005/GCF_000378005.1_ASM37800v1/ na assembly from type material na haploid bacteria 1424377 1414157 42.500000 0 2 7 NCBI RefSeq GCF_000378005.1-RS_2026_05_02 2026-05-02 1469 1410 57 na GCF_000378045.1 PRJNA224116 SAMN02440466 ARJM00000000.1 reference genome 1122202 420402 Marinobacterium rhizophilum DSM 18822 strain=DSM 18822 na latest Scaffold Major Full 2013-04-23 ASM37804v1 DOE Joint Genome Institute GCA_000378045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/045/GCF_000378045.1_ASM37804v1/ na assembly from type material na haploid bacteria 5364574 5360582 58.500000 0 58 68 NCBI RefSeq GCF_000378045.1-RS_2026_03_30 2026-03-30 4802 4658 76 na GCF_000378065.1 PRJNA224116 SAMN02441674 ARJN00000000.1 na 1122972 111105 Porphyromonas gulae DSM 15663 strain=DSM 15663 na latest Scaffold Major Full 2013-04-23 ASM37806v1 DOE Joint Genome Institute GCA_000378065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/065/GCF_000378065.1_ASM37806v1/ na assembly from type material na haploid bacteria 2315387 2311288 48.500000 0 63 67 NCBI RefSeq GCF_000378065.1-RS_2025_12_03 2025-12-03 2115 1982 56 na GCF_000378085.1 PRJNA224116 SAMN02441341 ARJO00000000.1 reference genome 1122985 840 Hoylesella loescheii DSM 19665 = JCM 12249 = ATCC 15930 strain=DSM 19665 na latest Scaffold Major Full 2013-04-23 ASM37808v1 DOE Joint Genome Institute GCA_000378085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/085/GCF_000378085.1_ASM37808v1/ na assembly from type material na haploid bacteria 3508589 3504766 46.500000 0 31 35 NCBI RefSeq GCF_000378085.1-RS_2025_09_13 2025-09-13 2650 2532 59 na GCF_000378105.1 PRJNA224116 SAMN02441342 ARJP00000000.1 reference genome 1123070 361055 Rubritalea marina DSM 17716 strain=DSM 17716 na latest Scaffold Major Full 2013-04-23 ASM37810v1 DOE Joint Genome Institute GCA_000378105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/105/GCF_000378105.1_ASM37810v1/ na assembly from type material na haploid bacteria 3013271 3013001 51.500000 0 30 32 NCBI RefSeq GCF_000378105.1-RS_2026_05_05 2026-05-05 2644 2574 55 na GCF_000378125.1 PRJNA224116 SAMN02441343 ARJQ00000000.1 reference genome 1123073 540746 Rudaea cellulosilytica DSM 22992 strain=DSM 22992 na latest Scaffold Major Full 2013-04-23 ASM37812v1 DOE Joint Genome Institute GCA_000378125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/125/GCF_000378125.1_ASM37812v1/ na assembly from type material na haploid bacteria 4343639 4343079 63.500000 0 6 7 NCBI RefSeq GCF_000378125.1-RS_2026_05_02 2026-05-02 3780 3711 54 na GCF_000378145.1 PRJNA224116 SAMN02441675 ARJR00000000.1 reference genome 1123226 459527 Saccharibacillus kuerlensis DSM 22868 strain=DSM 22868 na latest Scaffold Major Full 2013-04-23 ASM37814v1 DOE Joint Genome Institute GCA_000378145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/145/GCF_000378145.1_ASM37814v1/ na assembly from type material na haploid bacteria 4699563 4698338 50.500000 0 56 58 NCBI RefSeq GCF_000378145.1-RS_2026_04_26 2026-04-26 4108 3988 78 na GCF_000378165.1 PRJNA224116 SAMN02440467 ARJS00000000.1 reference genome 1123227 231053 Saccharibacter floricola DSM 15669 strain=DSM 15669 na latest Scaffold Major Full 2013-04-23 ASM37816v1 DOE Joint Genome Institute GCA_000378165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/165/GCF_000378165.1_ASM37816v1/ na assembly from type material na haploid bacteria 2384067 2379718 51.000000 0 43 47 NCBI RefSeq GCF_000378165.1-RS_2025_12_15 2025-12-15 2261 2179 57 na GCF_000378185.1 PRJNA224116 SAMN02440468 ARJT00000000.1 reference genome 1123236 265425 Salinimonas chungwhensis DSM 16280 strain=DSM 16280 na latest Scaffold Major Full 2013-04-23 ASM37818v1 DOE Joint Genome Institute GCA_000378185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/185/GCF_000378185.1_ASM37818v1/ na assembly from type material na haploid bacteria 3985437 3981974 47.000000 0 30 37 NCBI RefSeq GCF_000378185.1-RS_2025_12_13 2025-12-13 3607 3515 63 na GCF_000378205.1 PRJNA224116 SAMN02441006 ARJU00000000.1 reference genome 1123274 148 Sediminispirochaeta bajacaliforniensis DSM 16054 strain=DSM 16054 na latest Scaffold Major Full 2013-04-23 ASM37820v1 DOE Joint Genome Institute GCA_000378205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/205/GCF_000378205.1_ASM37820v1/ na assembly from type material na haploid bacteria 4576607 4574849 49.000000 0 75 80 NCBI RefSeq GCF_000378205.1-RS_2025_12_10 2025-12-10 4305 4217 54 na GCF_000378225.1 PRJNA224116 SAMN02440991 ARJW00000000.1 reference genome 1122236 17 Methylophilus methylotrophus DSM 46235 = ATCC 53528 strain=ATCC 53528 na latest Scaffold Major Full 2013-04-23 ASM37822v1 DOE Joint Genome Institute GCA_000378225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/225/GCF_000378225.1_ASM37822v1/ na assembly from type material na haploid bacteria 2860219 2860019 49.500000 0 14 16 NCBI RefSeq GCF_000378225.1-RS_2026_05_02 2026-05-02 2739 2678 49 na GCF_000378245.1 PRJNA224116 SAMN02441344 ARJX00000000.1 reference genome 1261621 92003 Aromatoleum toluclasticum ATCC 700605 strain=MF63 na latest Scaffold Major Full 2013-04-23 ASM37824v1 DOE Joint Genome Institute GCA_000378245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/245/GCF_000378245.1_ASM37824v1/ na assembly from type material na haploid bacteria 5925983 5924508 66.000000 0 47 48 NCBI RefSeq GCF_000378245.1-RS_2025_12_13 2025-12-13 5523 5406 61 na GCF_000378265.1 PRJNA224116 SAMN02441345 ARJY00000000.1 na 1158151 1158151 Thioalkalivibrio sp. ARh4 strain=ARh4 na latest Scaffold Major Full 2013-04-23 ASM37826v1 DOE Joint Genome Institute GCA_000378265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/265/GCF_000378265.1_ASM37826v1/ na na na haploid bacteria 3043512 3041762 65.500000 0 10 18 NCBI RefSeq GCF_000378265.1-RS_2024_08_13 2024-08-13 2913 2826 55 na GCF_000378285.1 PRJNA224116 SAMN02441330 ARJZ00000000.1 na 748655 748655 Thioalkalivibrio sp. ALgr1 strain=ALgr1 na latest Scaffold Major Full 2013-04-23 ASM37828v1 DOE Joint Genome Institute GCA_000378285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/285/GCF_000378285.1_ASM37828v1/ na na na haploid bacteria 2748836 2748535 66.000000 0 9 10 NCBI RefSeq GCF_000378285.1-RS_2024_08_13 2024-08-13 2625 2556 55 na GCF_000378305.1 PRJNA224116 SAMN02441677 ARKA00000000.1 na 1158761 1158761 Thioalkalivibrio sp. ALJ12 strain=ALJ12 na latest Scaffold Major Full 2013-04-23 ASM37830v1 DOE Joint Genome Institute GCA_000378305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/305/GCF_000378305.1_ASM37830v1/ na na na haploid bacteria 2779390 2778287 66.000000 0 6 10 NCBI RefSeq GCF_000378305.1-RS_2024_08_13 2024-08-13 2633 2560 52 na GCF_000378325.1 PRJNA224116 SAMN02440992 ARKB00000000.1 na 1261622 1261622 Thioalkalivibrio sp. ALJ2 strain=ALJ2 na latest Scaffold Major Full 2013-04-23 ASM37832v1 DOE Joint Genome Institute GCA_000378325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/325/GCF_000378325.1_ASM37832v1/ na na na haploid bacteria 2881727 2881096 66.000000 0 12 14 NCBI RefSeq GCF_000378325.1-RS_2024_08_13 2024-08-13 2753 2668 55 na GCF_000378345.1 PRJNA224116 SAMN02440469 ARKC00000000.1 reference genome 551275 1121961 Hirschia maritima DSM 19733 strain=DSM 19733 na latest Scaffold Major Full 2013-04-23 ASM37834v1 DOE Joint Genome Institute GCA_000378345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/345/GCF_000378345.1_ASM37834v1/ na assembly from type material na haploid bacteria 3351270 3351170 44.500000 0 10 11 NCBI RefSeq GCF_000378345.1-RS_2025_12_10 2025-12-10 3110 3038 59 na GCF_000378365.1 PRJNA224116 SAMN02441331 ARKD00000000.1 reference genome 1122217 491921 Megamonas rupellensis DSM 19944 strain=DSM 19944 na latest Scaffold Major Full 2013-04-23 ASM37836v1 DOE Joint Genome Institute GCA_000378365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/365/GCF_000378365.1_ASM37836v1/ na assembly from type material na haploid bacteria 2330046 2329946 31.500000 0 70 71 NCBI RefSeq GCF_000378365.1-RS_2026_04_23 2026-04-23 2299 2221 62 na GCF_000378385.1 PRJNA224116 SAMN02440993 ARKE00000000.1 reference genome 1122917 135193 Paenibacillus daejeonensis DSM 15491 strain=DSM 15491 na latest Scaffold Major Full 2013-04-23 ASM37838v1 DOE Joint Genome Institute GCA_000378385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/385/GCF_000378385.1_ASM37838v1/ na assembly from type material na haploid bacteria 7464058 7456872 53.500000 0 36 53 NCBI RefSeq GCF_000378385.1-RS_2026_05_02 2026-05-02 6491 6364 77 na GCF_000378405.1 PRJNA224116 SAMN02440994 ARKF00000000.1 reference genome 1265507 83769 Succinimonas amylolytica DSM 2873 strain=DSM 2873 na latest Scaffold Major Full 2013-04-23 ASM37840v1 DOE Joint Genome Institute GCA_000378405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/405/GCF_000378405.1_ASM37840v1/ na assembly from type material na haploid bacteria 3964271 3608306 48.000000 0 23 152 NCBI RefSeq GCF_000378405.1-RS_2026_05_02 2026-05-02 3007 2854 82 na GCF_000378425.1 PRJNA224116 SAMN02441662 ARKG00000000.1 reference genome 1121346 380174 Cohnella laeviribosi DSM 21336 strain=DSM 21336 na latest Scaffold Major Full 2013-04-23 ASM37842v1 DOE Joint Genome Institute GCA_000378425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/425/GCF_000378425.1_ASM37842v1/ na assembly from type material na haploid bacteria 4476185 4473194 57.500000 0 102 109 NCBI RefSeq GCF_000378425.1-RS_2026_05_02 2026-05-02 4277 4098 73 na GCF_000378445.1 PRJNA224116 SAMN02440995 ARKH00000000.1 reference genome 1121378 519440 Deinococcus aquatilis DSM 23025 strain=DSM 23025 na latest Scaffold Major Full 2013-04-23 ASM37844v1 DOE Joint Genome Institute GCA_000378445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/445/GCF_000378445.1_ASM37844v1/ na assembly from type material na haploid bacteria 5003288 5002538 62.000000 0 113 116 NCBI RefSeq GCF_000378445.1-RS_2026_05_02 2026-05-02 4725 4558 70 na GCF_000378465.1 PRJNA224116 SAMN02441332 ARKI00000000.1 reference genome 1121861 457934 Elioraea tepidiphila DSM 17972 strain=DSM 17972 na latest Scaffold Major Full 2013-04-23 ASM37846v1 DOE Joint Genome Institute GCA_000378465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/465/GCF_000378465.1_ASM37846v1/ na assembly from type material na haploid bacteria 4304237 4302251 71.500000 0 56 59 NCBI RefSeq GCF_000378465.1-RS_2026_05_02 2026-05-02 4172 4069 55 na GCF_000378485.1 PRJNA224116 SAMN02441333 ARKJ00000000.1 reference genome 1121895 498301 Flavobacterium rivuli WB 3.3-2 = DSM 21788 strain=DSM 21788 na latest Scaffold Major Full 2013-04-23 ASM37848v1 DOE Joint Genome Institute GCA_000378485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/485/GCF_000378485.1_ASM37848v1/ na assembly from type material na haploid bacteria 4489248 4487368 39.500000 0 23 26 NCBI RefSeq GCF_000378485.1-RS_2026_04_26 2026-04-26 4012 3933 60 na GCF_000378505.1 PRJNA224116 SAMN02440470 ARKK00000000.1 reference genome 1121943 453962 Modicisalibacter luteus DSM 23508 strain=DSM 23508 na latest Scaffold Major Full 2013-04-23 ASM37850v1 DOE Joint Genome Institute GCA_000378505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/505/GCF_000378505.1_ASM37850v1/ na assembly from type material na haploid bacteria 4533090 4531945 59.000000 0 42 49 NCBI RefSeq GCF_000378505.1-RS_2025_09_08 2025-09-08 4301 4141 75 na GCF_000378545.1 PRJNA224116 SAMN02441664 ARKM00000000.1 na 1265495 1265495 Thioalkalivibrio sp. ALE23 strain=ALE23 na latest Scaffold Major Full 2013-04-23 ASM37854v1 DOE Joint Genome Institute GCA_000378545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/545/GCF_000378545.1_ASM37854v1/ na na na haploid bacteria 2896574 2894024 67.500000 0 66 72 NCBI RefSeq GCF_000378545.1-RS_2024_08_13 2024-08-13 2809 2708 54 na GCF_000378565.1 PRJNA224116 SAMN02440471 ARKN00000000.1 na 1158149 1158149 Thioalkalivibrio sp. AL5 strain=AL5 na latest Scaffold Major Full 2013-04-23 ASM37856v1 DOE Joint Genome Institute GCA_000378565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/565/GCF_000378565.1_ASM37856v1/ na na na haploid bacteria 2980438 2980125 65.500000 0 11 13 NCBI RefSeq GCF_000378565.1-RS_2024_08_13 2024-08-13 2842 2759 55 na GCF_000378585.1 PRJNA224116 SAMN02440472 ARKO00000000.1 na 1158763 1158763 Thioalkalivibrio sp. ALJ20 strain=ALJ20 na latest Scaffold Major Full 2013-04-23 ASM37858v1 DOE Joint Genome Institute GCA_000378585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/585/GCF_000378585.1_ASM37858v1/ na na na haploid bacteria 2965657 2965357 65.500000 0 5 8 NCBI RefSeq GCF_000378585.1-RS_2024_08_12 2024-08-12 2887 2794 78 na GCF_000378605.1 PRJNA224116 SAMN02440996 ARKP00000000.1 na 1158764 1158764 Thioalkalivibrio sp. ALJ21 strain=ALJ21 na latest Scaffold Major Full 2013-04-23 ASM37860v1 DOE Joint Genome Institute GCA_000378605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/605/GCF_000378605.1_ASM37860v1/ na na na haploid bacteria 2964639 2964539 65.500000 0 5 6 NCBI RefSeq GCF_000378605.1-RS_2024_08_13 2024-08-13 2888 2793 78 na GCF_000378625.1 PRJNA224116 SAMN02440473 ARKQ00000000.1 reference genome 1265503 211668 Colwellia piezophila ATCC BAA-637 strain=ATCC BAA-637 na latest Scaffold Major Full 2013-04-23 ASM37862v1 DOE Joint Genome Institute GCA_000378625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/625/GCF_000378625.1_ASM37862v1/ na assembly from type material na haploid bacteria 5484375 5478526 39.000000 0 38 50 NCBI RefSeq GCF_000378625.1-RS_2026_05_02 2026-05-02 4555 4420 76 na GCF_000378645.1 PRJNA224116 SAMN02440474 ARKR00000000.1 na 1169176 168697 Salinispora arenicola CNH877 strain=CNH877 na latest Scaffold Major Full 2013-04-23 ASM37864v1 DOE Joint Genome Institute GCA_000378645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/645/GCF_000378645.1_ASM37864v1/ na na na haploid bacteria 5795920 5794910 69.500000 0 93 96 NCBI RefSeq GCF_000378645.1-RS_2026_01_30 2026-01-30 5240 4947 65 na GCF_000378665.1 PRJNA224116 SAMN02441665 ARKS00000000.1 na 1169175 168697 Salinispora arenicola CNH962 strain=CNH962 na latest Scaffold Major Full 2013-04-23 ASM37866v1 DOE Joint Genome Institute GCA_000378665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/665/GCF_000378665.1_ASM37866v1/ na na na haploid bacteria 5434989 5431430 69.500000 0 87 95 NCBI RefSeq GCF_000378665.1-RS_2026_05_12 2026-05-12 4980 4630 61 na GCF_000378685.1 PRJNA224116 SAMN02441666 ARKT00000000.1 na 1169167 168697 Salinispora arenicola CNR107 strain=CNR107 na latest Scaffold Major Full 2013-04-23 ASM37868v1 DOE Joint Genome Institute GCA_000378685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/685/GCF_000378685.1_ASM37868v1/ na na na haploid bacteria 5767406 5766741 69.500000 0 48 51 NCBI RefSeq GCF_000378685.1-RS_2026_05_12 2026-05-12 5193 4960 66 na GCF_000378705.1 PRJNA224116 SAMN02440475 ARKV00000000.1 na 1169164 168697 Salinispora arenicola CNY282 strain=CNY282 na latest Scaffold Major Full 2013-04-23 ASM37870v1 DOE Joint Genome Institute GCA_000378705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/705/GCF_000378705.1_ASM37870v1/ na na na haploid bacteria 5755139 5751681 69.500000 0 67 74 NCBI RefSeq GCF_000378705.1-RS_2026_05_12 2026-05-12 5228 4995 64 na GCF_000378725.1 PRJNA224116 SAMN02441667 ARKX00000000.1 na 1122949 33031 Peptoniphilus lacrimalis DSM 7455 strain=DSM 7455 na latest Scaffold Major Full 2013-04-23 ASM37872v1 DOE Joint Genome Institute GCA_000378725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/725/GCF_000378725.1_ASM37872v1/ na assembly from type material na haploid bacteria 1849203 1849103 30.000000 0 21 22 NCBI RefSeq GCF_000378725.1-RS_2025_12_23 2025-12-23 1809 1729 51 na GCF_000378745.1 PRJNA224116 SAMN02440476 ARKY00000000.1 na 1122979 419005 Prevotella amnii DSM 23384 = JCM 14753 strain=DSM 23384 na latest Scaffold Major Full 2013-04-23 ASM37874v1 DOE Joint Genome Institute GCA_000378745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/745/GCF_000378745.1_ASM37874v1/ na assembly from type material na haploid bacteria 2391937 2382022 36.500000 0 77 86 NCBI RefSeq GCF_000378745.1-RS_2026_05_16 2026-05-16 2084 1934 49 na GCF_000378765.1 PRJNA224116 SAMN02440477 ARLA00000000.1 reference genome 1123035 197345 Psychroflexus tropicus DSM 15496 strain=DSM 15496 na latest Scaffold Major Full 2013-04-23 ASM37876v1 DOE Joint Genome Institute GCA_000378765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/765/GCF_000378765.1_ASM37876v1/ na assembly from type material na haploid bacteria 3001811 2995746 36.500000 0 17 28 NCBI RefSeq GCF_000378765.1-RS_2026_05_02 2026-05-02 2813 2746 45 na GCF_000378785.1 PRJNA224116 SAMN02261275 AQZC00000000.1 na 935558 110321 Sinorhizobium medicae WSM1115 strain=WSM1115 na latest Scaffold Major Full 2013-04-23 ASM37878v1 JGI GCA_000378785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/785/GCF_000378785.1_ASM37878v1/ na na na haploid bacteria 6861065 6859042 61.000000 0 7 28 NCBI RefSeq GCF_000378785.1-RS_2026_01_23 2026-01-23 6705 6333 69 na GCF_000378805.1 PRJNA224116 SAMN02261276 AQZD00000000.1 na 872024 49338 Desulfitobacterium hafniense TCP-A strain=TCP-A na latest Scaffold Major Full 2013-04-23 ASM37880v1 JGI GCA_000378805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/805/GCF_000378805.1_ASM37880v1/ na na na haploid bacteria 4967232 4965332 47.500000 0 2 21 NCBI RefSeq GCF_000378805.1-RS_2026_05_13 2026-05-13 4857 4690 62 29040502 GCF_000378825.1 PRJNA224116 SAMN02261277 AQZE00000000.1 reference genome 999544 999544 Salinispora vitiensis strain=DSM 45548 na latest Scaffold Major Full 2013-04-23 ASM37882v1 JGI GCA_000378825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/825/GCF_000378825.1_ASM37882v1/ na assembly from type material na haploid bacteria 5097790 5096990 70.000000 0 2 10 NCBI RefSeq GCF_000378825.1-RS_2025_11_22 2025-11-22 4825 4627 63 na GCF_000378845.1 PRJNA224116 SAMN02261279 AQZG00000000.1 reference genome 999543 351187 Salinispora pacifica DSM 45544 strain=DSM 45544 na latest Scaffold Major Full 2013-04-23 ASM37884v1 JGI GCA_000378845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/845/GCF_000378845.1_ASM37884v1/ na na na haploid bacteria 5464752 5462252 70.000000 0 4 29 NCBI RefSeq GCF_000378845.1-RS_2025_12_13 2025-12-13 5024 4782 63 na GCF_000378945.1 PRJNA224116 SAMN02261291 AQZM00000000.1 na 999628 378211 Methyloversatilis universalis EHg5 strain=EHg5 na latest Scaffold Major Full 2013-04-23 ASM37894v1 JGI GCA_000378945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/945/GCF_000378945.1_ASM37894v1/ na na na haploid bacteria 4088571 4087771 66.500000 0 2 10 NCBI RefSeq GCF_000378945.1-RS_2025_08_25 2025-08-25 3770 3683 65 na GCF_000378965.1 PRJNA224116 SAMN02261294 AQZO00000000.1 reference genome 713586 243063 Thioalkalivibrio thiocyanodenitrificans ARhD 1 strain=ARhD 1 na latest Scaffold Major Full 2013-04-23 ASM37896v1 JGI GCA_000378965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/965/GCF_000378965.1_ASM37896v1/ na assembly from type material na haploid bacteria 3746647 3746147 65.000000 0 3 8 NCBI RefSeq GCF_000378965.1-RS_2025_12_13 2025-12-13 3606 3485 92 na GCF_000378985.1 PRJNA224116 SAMN02261311 AQZQ00000000.1 na 1057002 1057002 Ensifer sp. BR816 strain=BR816 na latest Scaffold Major Full 2013-04-23 ASM37898v1 JGI GCA_000378985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/985/GCF_000378985.1_ASM37898v1/ na na na haploid bacteria 6951533 6951123 62.500000 0 3 8 NCBI RefSeq GCF_000378985.1-RS_2024_08_22 2024-08-22 6546 6280 67 na GCF_000379005.1 PRJNA224116 SAMN02261312 AQZR00000000.1 na 936350 384 Rhizobium leguminosarum bv. phaseoli 4292 strain=4292 na latest Scaffold Major Full 2013-04-23 ASM37900v1 JGI GCA_000379005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/005/GCF_000379005.1_ASM37900v1/ na na na haploid bacteria 7346596 7345696 60.500000 0 5 14 NCBI RefSeq GCF_000379005.1-RS_2026_04_29 2026-04-29 7084 6809 62 na GCF_000379025.1 PRJNA224116 SAMN02261313 AQZS00000000.1 reference genome 926561 46469 Orenia marismortui DSM 5156 strain=DSM 5156 na latest Scaffold Major Full 2013-04-23 ASM37902v1 JGI GCA_000379025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/025/GCF_000379025.1_ASM37902v1/ na assembly from type material na haploid bacteria 3459766 3457866 30.500000 0 9 28 NCBI RefSeq GCF_000379025.1-RS_2025_12_09 2025-12-09 3290 3160 100 na GCF_000379045.1 PRJNA224116 SAMN02261316 AQZT00000000.1 reference genome 1090320 152682 Sphingomonas melonis DAPP-PG 224 strain=DAPP-PG 224 na latest Scaffold Major Full 2013-04-23 ASM37904v1 JGI GCA_000379045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/045/GCF_000379045.1_ASM37904v1/ na assembly from type material na haploid bacteria 4096205 4096005 67.000000 0 4 6 NCBI RefSeq GCF_000379045.1-RS_2025_12_11 2025-12-11 3944 3841 59 na GCF_000379065.1 PRJNA224116 SAMN02261320 AQZW00000000.1 reference genome 999545 999545 Salinispora mooreana strain=DSM 45549 na latest Scaffold Major Full 2013-04-23 ASM37906v1 JGI GCA_000379065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/065/GCF_000379065.1_ASM37906v1/ na assembly from type material na haploid bacteria 5198196 5194796 69.500000 0 3 37 NCBI RefSeq GCF_000379065.1-RS_2025_11_23 2025-11-23 5025 4679 66 na GCF_000379085.1 PRJNA224116 SAMN02261322 AQZY00000000.1 reference genome 1069082 437163 Halomicrobium katesii DSM 19301 strain=DSM 19301 na latest Scaffold Major Full 2013-04-23 ASM37908v1 JGI GCA_000379085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/085/GCF_000379085.1_ASM37908v1/ na assembly from type material na haploid archaea 3607771 3605861 65.000000 0 2 22 NCBI RefSeq GCF_000379085.1-RS_2025_11_21 2025-11-21 3735 3541 60 na GCF_000379105.1 PRJNA224116 SAMN02261324 ARAA00000000.1 na 398261 398261 Methylobacterium sp. WSM2598 strain=WSM2598 na latest Scaffold Major Full 2013-04-23 ASM37910v1 JGI GCA_000379105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/105/GCF_000379105.1_ASM37910v1/ na na na haploid bacteria 7669765 7661965 71.000000 0 5 83 NCBI RefSeq GCF_000379105.1-RS_2025_08_25 2025-08-25 7199 6808 84 na GCF_000379125.1 PRJNA224116 SAMN02261246 ARAB00000000.1 na 136993 136993 Methylosinus sp. LW4 strain=LW4 na latest Scaffold Major Full 2013-04-23 ASM37912v1 JGI GCA_000379125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/125/GCF_000379125.1_ASM37912v1/ na na na haploid bacteria 4824446 4823146 65.000000 0 3 16 NCBI RefSeq GCF_000379125.1-RS_2025_09_05 2025-09-05 4482 4336 66 na GCF_000379145.1 PRJNA224116 SAMN02261261 ARAG00000000.1 na 398525 29448 Bradyrhizobium elkanii USDA 76 strain=USDA 76 na latest Scaffold Major Full 2013-04-23 ASM37914v1 JGI GCA_000379145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/145/GCF_000379145.1_ASM37914v1/ na assembly from type material na haploid bacteria 9484767 9482467 63.500000 0 2 25 NCBI RefSeq GCF_000379145.1-RS_2026_03_31 2026-03-31 9013 8649 59 na GCF_000379165.1 PRJNA224116 SAMN02256427 ARAH00000000.1 na 1056820 2426 Teredinibacter turnerae T7902 strain=T7902 na latest Scaffold Major Full 2013-04-23 ASM37916v1 DOE Joint Genome Institute GCA_000379165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/165/GCF_000379165.1_ASM37916v1/ na assembly from type material na haploid bacteria 5387817 5383525 51.000000 0 72 76 NCBI RefSeq GCF_000379165.1-RS_2026_03_15 2026-03-15 4361 4283 43 na GCF_000379185.1 PRJNA224116 SAMN02256428 ARAI00000000.1 na 926551 28189 Capnocytophaga cynodegmi DSM 19736 strain=E6447, DSM 19736 na latest Scaffold Major Full 2013-04-23 ASM37918v1 DOE Joint Genome Institute GCA_000379185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/185/GCF_000379185.1_ASM37918v1/ na assembly from type material na haploid bacteria 2657104 2656699 34.500000 0 37 40 NCBI RefSeq GCF_000379185.1-RS_2025_12_06 2025-12-06 2368 2305 49 na GCF_000379365.1 PRJNA224116 SAMN02256457 ARAS00000000.1 na 1134055 1134055 Verrucomicrobium sp. 3C strain=3C na latest Scaffold Major Full 2013-04-23 ASM37936v1 DOE Joint Genome Institute GCA_000379365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/365/GCF_000379365.1_ASM37936v1/ na na na haploid bacteria 2772066 2759056 61.000000 0 8 139 NCBI RefSeq GCF_000379365.1-RS_2024_08_07 2024-08-07 2743 2520 56 na GCF_000379405.1 PRJNA224116 SAMN02256458 ARAU00000000.1 na 1188231 314344 Mariprofundus ferrooxydans M34 strain=M34 na latest Scaffold Major Full 2013-04-23 ASM37940v1 DOE Joint Genome Institute GCA_000379405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/405/GCF_000379405.1_ASM37940v1/ na na na haploid bacteria 2736181 2733661 54.000000 0 36 40 NCBI RefSeq GCF_000379405.1-RS_2026_02_06 2026-02-06 2693 2608 51 na GCF_000379425.1 PRJNA224116 SAMN02256424 ARAV00000000.1 reference genome 1121363 541095 Corynebacterium lubricantis DSM 45231 strain=DSM 45231 na latest Scaffold Major Full 2013-04-23 ASM37942v1 DOE Joint Genome Institute GCA_000379425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/425/GCF_000379425.1_ASM37942v1/ na assembly from type material na haploid bacteria 2944170 2943583 58.500000 0 58 60 NCBI RefSeq GCF_000379425.1-RS_2026_05_02 2026-05-02 2856 2744 59 na GCF_000379445.1 PRJNA224116 SAMN02256423 ARAW00000000.1 reference genome 1089439 270495 Fangia hongkongensis FSC776 = DSM 21703 strain=DSM 21703 na latest Scaffold Major Full 2013-04-23 ASM37944v1 DOE Joint Genome Institute GCA_000379445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/445/GCF_000379445.1_ASM37944v1/ na assembly from type material na haploid bacteria 2946743 2946478 38.000000 0 37 38 NCBI RefSeq GCF_000379445.1-RS_2026_03_30 2026-03-30 2770 2698 57 na GCF_000379465.1 PRJNA224116 SAMN02256422 ARAX00000000.1 reference genome 1123244 508770 Sciscionella marina DSM 45152 strain=DSM 45152 na latest Scaffold Major Full 2013-04-23 ASM37946v1 DOE Joint Genome Institute GCA_000379465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/465/GCF_000379465.1_ASM37946v1/ na assembly from type material na haploid bacteria 8536451 8536406 68.000000 0 86 87 NCBI RefSeq GCF_000379465.1-RS_2026_03_30 2026-03-30 8255 7988 63 na GCF_000379485.1 PRJNA224116 SAMN02256455 ARAY00000000.1 na 1123501 390641 Wenxinia marina DSM 24838 strain=DSM 24838 na latest Scaffold Major Full 2013-04-23 ASM37948v1 DOE Joint Genome Institute GCA_000379485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/485/GCF_000379485.1_ASM37948v1/ na assembly from type material na haploid bacteria 4175892 4175494 70.500000 0 41 42 NCBI RefSeq GCF_000379485.1-RS_2025_07_24 2025-07-24 4112 3999 53 na GCF_000379505.1 PRJNA224116 SAMN02256454 ARAZ00000000.1 na 1090321 49338 Desulfitobacterium hafniense PCP-1 strain=PCP-1 na latest Scaffold Major Full 2013-04-23 ASM37950v1 DOE Joint Genome Institute GCA_000379505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/505/GCF_000379505.1_ASM37950v1/ na assembly from heterotypic synonym type material na haploid bacteria 5563209 5559634 47.500000 0 45 48 NCBI RefSeq GCF_000379505.1-RS_2026_05_13 2026-05-13 5390 5247 70 29040502 GCF_000379525.1 PRJNA224116 SAMN02256451 ARBC00000000.1 reference genome 765909 61598 Lamprocystis purpurea DSM 4197 strain=DSM 4197 na latest Scaffold Major Full 2013-04-23 ASM37952v1 DOE Joint Genome Institute GCA_000379525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/525/GCF_000379525.1_ASM37952v1/ na assembly from type material na haploid bacteria 6908745 6902880 64.500000 0 213 224 NCBI RefSeq GCF_000379525.1-RS_2025_12_09 2025-12-09 6157 5963 62 na GCF_000379545.1 PRJNA224116 SAMN02256453 ARBD00000000.1 na 663932 435 Acetobacter aceti ATCC 23746 strain=ATCC 23746 na latest Scaffold Major Full 2013-04-23 ASM37954v1 DOE Joint Genome Institute GCA_000379545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/545/GCF_000379545.1_ASM37954v1/ na na na haploid bacteria 3690768 3690268 57.000000 0 3 8 NCBI RefSeq GCF_000379545.1-RS_2025_12_22 2025-12-22 3430 3274 63 na GCF_000379565.1 PRJNA224116 SAMN02256448 ARBE00000000.1 na 1080187 1080187 Cupriavidus sp. UYPR2.512 strain=UYPR2.512 na latest Scaffold Major Full 2013-04-23 ASM37956v1 DOE Joint Genome Institute GCA_000379565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/565/GCF_000379565.1_ASM37956v1/ na na na haploid bacteria 7858949 7858839 65.500000 0 365 367 NCBI RefSeq GCF_000379565.1-RS_2024_08_13 2024-08-13 7578 7083 66 na GCF_000379585.1 PRJNA224116 SAMN02256452 ARBF00000000.1 na 1038866 1038866 Bradyrhizobium sp. WSM2793 strain=WSM2793 na latest Scaffold Major Full 2013-04-23 ASM37958v1 DOE Joint Genome Institute GCA_000379585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/585/GCF_000379585.1_ASM37958v1/ na na na haploid bacteria 8871253 8870833 63.500000 0 84 85 NCBI RefSeq GCF_000379585.1-RS_2024_08_22 2024-08-22 8394 8094 57 na GCF_000379605.1 PRJNA224116 SAMN02256420 ARBG00000000.1 na 1041139 56731 Rhizobium giardinii bv. giardinii H152 strain=H152 na latest Scaffold Major Full 2013-04-23 ASM37960v1 DOE Joint Genome Institute GCA_000379605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/605/GCF_000379605.1_ASM37960v1/ na assembly from type material na haploid bacteria 6810126 6808606 60.500000 0 190 194 NCBI RefSeq GCF_000379605.1-RS_2026_03_31 2026-03-31 6655 6322 53 na GCF_000379625.1 PRJNA224116 SAMN02256421 ARBI00000000.1 reference genome 1120948 402650 Actinomycetospora chiangmaiensis DSM 45062 strain=DSM 45062 na latest Scaffold Major Full 2013-04-23 ASM37962v1 DOE Joint Genome Institute GCA_000379625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/625/GCF_000379625.1_ASM37962v1/ na assembly from type material na haploid bacteria 5861079 5860284 74.000000 0 32 35 NCBI RefSeq GCF_000379625.1-RS_2026_05_02 2026-05-02 5771 5645 59 na GCF_000379645.1 PRJNA224116 SAMN02256449 ARBJ00000000.1 reference genome 1120949 113565 Paractinoplanes globisporus DSM 43857 strain=DSM 43857 na latest Scaffold Major Full 2013-04-23 ASM37964v1 DOE Joint Genome Institute GCA_000379645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/645/GCF_000379645.1_ASM37964v1/ na assembly from type material na haploid bacteria 10988507 10987776 71.000000 0 65 69 NCBI RefSeq GCF_000379645.1-RS_2025_09_01 2025-09-01 10147 9947 73 na GCF_000379665.1 PRJNA224116 SAMN02256450 ARBK00000000.1 reference genome 1121129 544644 Butyricimonas synergistica DSM 23225 strain=DSM 23225 na latest Scaffold Major Full 2013-04-23 ASM37966v1 DOE Joint Genome Institute GCA_000379665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/665/GCF_000379665.1_ASM37966v1/ na assembly from type material na haploid bacteria 4770838 4770778 45.000000 0 16 17 NCBI RefSeq GCF_000379665.1-RS_2025_11_21 2025-11-21 3875 3761 68 na GCF_000379685.1 PRJNA224116 SAMN02256447 ARBL00000000.1 reference genome 1121272 129052 Catelliglobosispora koreensis DSM 44566 strain=DSM 44566 na latest Scaffold Major Full 2013-04-23 ASM37968v1 DOE Joint Genome Institute GCA_000379685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/685/GCF_000379685.1_ASM37968v1/ na assembly from type material na haploid bacteria 7688589 7688048 64.500000 0 45 48 NCBI RefSeq GCF_000379685.1-RS_2025_12_09 2025-12-09 7543 7342 84 na GCF_000379705.1 PRJNA224116 SAMN02256419 ARBM00000000.1 na 1121355 234828 Corynebacterium caspium DSM 44850 strain=DSM 44850 na latest Scaffold Major Full 2013-04-23 ASM37970v1 DOE Joint Genome Institute GCA_000379705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/705/GCF_000379705.1_ASM37970v1/ na assembly from type material na haploid bacteria 1843677 1842962 49.500000 0 8 10 NCBI RefSeq GCF_000379705.1-RS_2026_05_02 2026-05-02 1683 1615 61 na GCF_000379725.1 PRJNA224116 SAMN02256446 ARBN00000000.1 reference genome 1121373 29530 Cytophaga aurantiaca DSM 3654 strain=DSM 3654 na latest Scaffold Major Full 2013-04-23 ASM37972v1 DOE Joint Genome Institute GCA_000379725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/725/GCF_000379725.1_ASM37972v1/ na assembly from type material na haploid bacteria 4425125 4422495 37.000000 0 47 52 NCBI RefSeq GCF_000379725.1-RS_2026_05_02 2026-05-02 3830 3774 45 na GCF_000379745.1 PRJNA224116 SAMN02256445 ARBO00000000.1 na 1121864 44008 Enterococcus cecorum DSM 20682 = ATCC 43198 strain=DSM 20682 na latest Scaffold Major Full 2013-04-23 ASM37974v1 DOE Joint Genome Institute GCA_000379745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/745/GCF_000379745.1_ASM37974v1/ na assembly from type material na haploid bacteria 2340853 2336810 36.500000 0 47 50 NCBI RefSeq GCF_000379745.1-RS_2025_12_23 2025-12-23 2434 2312 63 na GCF_000379765.1 PRJNA224116 SAMN02256418 ARBP00000000.1 reference genome 1121904 70993 Flexithrix dorotheae DSM 6795 strain=DSM 6795 na latest Scaffold Major Full 2013-04-23 ASM37976v1 DOE Joint Genome Institute GCA_000379765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/765/GCF_000379765.1_ASM37976v1/ na assembly from type material na haploid bacteria 9536821 9535678 36.500000 0 101 105 NCBI RefSeq GCF_000379765.1-RS_2026_05_02 2026-05-02 7215 7121 52 na GCF_000379785.1 PRJNA224116 SAMN02256443 ARBQ00000000.1 na 1121910 750 Gallibacterium anatis DSM 16844 = F 149 strain=DSM 16844 na latest Scaffold Major Full 2013-04-23 ASM37978v1 DOE Joint Genome Institute GCA_000379785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/785/GCF_000379785.1_ASM37978v1/ na assembly from type material na haploid bacteria 2436265 2435528 40.000000 0 103 107 NCBI RefSeq GCF_000379785.1-RS_2025_12_23 2025-12-23 2443 2334 59 na GCF_000379805.1 PRJNA224116 SAMN02256444 ARBR00000000.1 reference genome 1122176 70995 Lewinella cohaerens DSM 23179 strain=DSM 23179 na latest Scaffold Major Full 2013-04-23 ASM37980v1 DOE Joint Genome Institute GCA_000379805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/805/GCF_000379805.1_ASM37980v1/ na assembly from type material na haploid bacteria 7298817 7297380 45.000000 0 89 91 NCBI RefSeq GCF_000379805.1-RS_2026_05_02 2026-05-02 5457 5367 49 na GCF_000379825.1 PRJNA224116 SAMN02256442 ARBS00000000.1 reference genome 1122182 203523 Longispora albida DSM 44784 strain=DSM 44784 na latest Scaffold Major Full 2013-04-23 ASM37982v1 DOE Joint Genome Institute GCA_000379825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/825/GCF_000379825.1_ASM37982v1/ na assembly from type material na haploid bacteria 6821241 6821201 70.500000 0 27 29 NCBI RefSeq GCF_000379825.1-RS_2026_05_02 2026-05-02 6444 6306 78 na GCF_000379845.1 PRJNA224116 SAMN02256417 ARBT00000000.1 reference genome 1122243 346665 Moraxella boevrei DSM 14165 strain=DSM 14165 na latest Scaffold Major Full 2013-04-23 ASM37984v1 DOE Joint Genome Institute GCA_000379845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/845/GCF_000379845.1_ASM37984v1/ na assembly from type material na haploid bacteria 2427214 2427064 40.000000 0 43 44 NCBI RefSeq GCF_000379845.1-RS_2025_12_10 2025-12-10 2382 2286 52 na GCF_000379865.1 PRJNA224116 SAMN02256416 ARBU00000000.1 na 1122247 46351 Mycolicibacterium hassiacum DSM 44199 strain=DSM 44199 na latest Scaffold Major Full 2013-04-23 ASM37986v1 DOE Joint Genome Institute GCA_000379865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/865/GCF_000379865.1_ASM37986v1/ na assembly from type material na haploid bacteria 5082325 5079967 69.500000 0 99 104 NCBI RefSeq GCF_000379865.1-RS_2025_12_23 2025-12-23 4960 4777 58 na GCF_000379885.1 PRJNA224116 SAMN02256440 ARBV00000000.1 na 1122611 404386 Nonomuraea coxensis DSM 45129 strain=DSM 45129 na latest Scaffold Major Full 2013-04-23 ASM37988v1 DOE Joint Genome Institute GCA_000379885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/885/GCF_000379885.1_ASM37988v1/ na assembly from type material na haploid bacteria 8996452 8995796 72.000000 0 101 104 NCBI RefSeq GCF_000379885.1-RS_2026_05_16 2026-05-16 8604 8398 72 na GCF_000379905.1 PRJNA224116 SAMN02256441 ARBW00000000.1 na 1122936 758 Rodentibacter pneumotropicus DSM 21403 strain=DSM 21403 na latest Scaffold Major Full 2013-04-23 ASM37990v1 DOE Joint Genome Institute GCA_000379905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/905/GCF_000379905.1_ASM37990v1/ na assembly from type material na haploid bacteria 2257166 2256449 40.000000 0 22 24 NCBI RefSeq GCF_000379905.1-RS_2026_05_16 2026-05-16 2143 2034 62 na GCF_000379925.1 PRJNA224116 SAMN02256439 ARBX00000000.1 na 1122973 28114 Porphyromonas levii DSM 23370 strain=DSM 23370 na latest Scaffold Major Full 2013-04-23 ASM37992v1 DOE Joint Genome Institute GCA_000379925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/925/GCF_000379925.1_ASM37992v1/ na assembly from type material na haploid bacteria 2516477 2514517 45.500000 0 124 125 NCBI RefSeq GCF_000379925.1-RS_2026_05_16 2026-05-16 2207 2075 51 na GCF_000379945.1 PRJNA224116 SAMN02256414 ARBY00000000.1 reference genome 1122974 28115 Porphyromonas macacae DSM 20710 = JCM 13914 strain=DSM 20710 na latest Scaffold Major Full 2013-04-23 ASM37994v1 DOE Joint Genome Institute GCA_000379945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/945/GCF_000379945.1_ASM37994v1/ na assembly from type material na haploid bacteria 2214526 2213832 43.500000 0 31 32 NCBI RefSeq GCF_000379945.1-RS_2025_12_11 2025-12-11 1878 1792 54 na GCF_000379965.1 PRJNA224116 SAMN02256415 ARBZ00000000.1 reference genome 1122988 425941 Hoylesella nanceiensis DSM 19126 = JCM 15639 strain=DSM 19126 na latest Scaffold Major Full 2013-04-23 ASM37996v1 DOE Joint Genome Institute GCA_000379965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/965/GCF_000379965.1_ASM37996v1/ na assembly from type material na haploid bacteria 2650108 2648555 38.500000 0 12 13 NCBI RefSeq GCF_000379965.1-RS_2026_04_07 2026-04-07 2075 1990 52 na GCF_000379985.1 PRJNA224116 SAMN02256438 ARCA00000000.1 reference genome 1123298 439220 Streptococcus caballi DSM 19004 strain=DSM 19004 na latest Scaffold Major Full 2013-04-23 ASM37998v1 DOE Joint Genome Institute GCA_000379985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/379/985/GCF_000379985.1_ASM37998v1/ na assembly from type material na haploid bacteria 2122044 2119915 40.500000 0 62 63 NCBI RefSeq GCF_000379985.1-RS_2026_03_30 2026-03-30 2195 2020 43 na GCF_000380005.1 PRJNA224116 SAMN02256413 ARCB00000000.1 reference genome 1123301 102886 Streptococcus didelphis DSM 15616 strain=DSM 15616 na latest Scaffold Major Full 2013-04-23 ASM38000v1 DOE Joint Genome Institute GCA_000380005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/005/GCF_000380005.1_ASM38000v1/ na assembly from type material na haploid bacteria 1877438 1876821 36.000000 0 15 17 NCBI RefSeq GCF_000380005.1-RS_2026_05_02 2026-05-02 1847 1752 51 na GCF_000380025.1 PRJNA224116 SAMN02256412 ARCC00000000.1 reference genome 1123302 155680 Streptococcus entericus DSM 14446 strain=DSM 14446 na latest Scaffold Major Full 2013-04-23 ASM38002v1 DOE Joint Genome Institute GCA_000380025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/025/GCF_000380025.1_ASM38002v1/ na assembly from type material na haploid bacteria 2036468 2035779 44.500000 0 33 35 NCBI RefSeq GCF_000380025.1-RS_2026_03_15 2026-03-15 2082 1985 46 na GCF_000380045.1 PRJNA224116 SAMN02256437 ARCD00000000.1 reference genome 1123306 269666 Streptococcus marimammalium DSM 18627 strain=DSM 18627 na latest Scaffold Major Full 2013-04-23 ASM38004v1 DOE Joint Genome Institute GCA_000380045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/045/GCF_000380045.1_ASM38004v1/ na assembly from type material na haploid bacteria 1505444 1502400 33.000000 0 25 27 NCBI RefSeq GCF_000380045.1-RS_2026_03_15 2026-03-15 1500 1400 62 na GCF_000380065.1 PRJNA224116 SAMN02256435 ARCE00000000.1 na 1123307 313439 Streptococcus massiliensis DSM 18628 strain=DSM 18628 na latest Scaffold Major Full 2013-04-23 ASM38006v1 DOE Joint Genome Institute GCA_000380065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/065/GCF_000380065.1_ASM38006v1/ na assembly from type material na haploid bacteria 1864153 1862188 41.500000 0 84 87 NCBI RefSeq GCF_000380065.1-RS_2026_03_31 2026-03-31 1964 1841 30 na GCF_000380085.1 PRJNA224116 SAMN02256436 ARCF00000000.1 na 1123308 400065 Streptococcus merionis DSM 19192 strain=DSM 19192 na latest Scaffold Major Full 2013-04-23 ASM38008v1 DOE Joint Genome Institute GCA_000380085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/085/GCF_000380085.1_ASM38008v1/ na assembly from type material na haploid bacteria 2357340 2356922 41.500000 0 24 25 NCBI RefSeq GCF_000380085.1-RS_2026_05_16 2026-05-16 2235 2121 59 na GCF_000380105.1 PRJNA224116 SAMN02256410 ARCG00000000.1 reference genome 1123311 114652 Streptococcus orisratti DSM 15617 strain=DSM 15617 na latest Scaffold Major Full 2013-04-23 ASM38010v1 DOE Joint Genome Institute GCA_000380105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/105/GCF_000380105.1_ASM38010v1/ na assembly from type material na haploid bacteria 2416134 2415121 38.500000 0 90 92 NCBI RefSeq GCF_000380105.1-RS_2026_05_02 2026-05-02 2431 2271 33 na GCF_000380125.1 PRJNA224116 SAMN02256411 ARCH00000000.1 reference genome 1123312 82806 Streptococcus ovis DSM 16829 strain=DSM 16829 na latest Scaffold Major Full 2013-04-23 ASM38012v1 DOE Joint Genome Institute GCA_000380125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/125/GCF_000380125.1_ASM38012v1/ na assembly from type material na haploid bacteria 2358538 2358342 40.000000 0 24 26 NCBI RefSeq GCF_000380125.1-RS_2026_05_02 2026-05-02 2423 2299 65 na GCF_000380145.1 PRJNA224116 SAMN02256409 ARCI00000000.1 reference genome 1123318 55085 Streptococcus thoraltensis DSM 12221 strain=DSM 12221 na latest Scaffold Major Full 2013-04-23 ASM38014v1 DOE Joint Genome Institute GCA_000380145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/145/GCF_000380145.1_ASM38014v1/ na assembly from type material na haploid bacteria 2385218 2383584 38.500000 0 48 52 NCBI RefSeq GCF_000380145.1-RS_2026_04_26 2026-04-26 2264 2110 38 na GCF_000380165.1 PRJNA224116 SAMN02256407 ARCK00000000.1 reference genome 1123322 76728 Wenjunlia vitaminophila DSM 41686 strain=DSM 41686 na latest Scaffold Major Full 2013-04-23 ASM38016v1 DOE Joint Genome Institute GCA_000380165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/165/GCF_000380165.1_ASM38016v1/ na assembly from type material na haploid bacteria 6429887 6429852 72.000000 0 112 113 NCBI RefSeq GCF_000380165.1-RS_2025_12_10 2025-12-10 5557 5392 65 na GCF_000380185.1 PRJNA224116 SAMN02256434 ARCL00000000.1 reference genome 1123400 125627 Thiofilum flexile DSM 14609 strain=DSM 14609 na latest Scaffold Major Full 2013-04-23 ASM38018v1 DOE Joint Genome Institute GCA_000380185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/185/GCF_000380185.1_ASM38018v1/ na assembly from type material na haploid bacteria 3787626 3786883 44.500000 0 72 74 NCBI RefSeq GCF_000380185.1-RS_2026_05_02 2026-05-02 3562 3469 58 na GCF_000380205.1 PRJNA224116 SAMN02256408 ARCM00000000.1 na 1111106 1111106 Ancylobacter sp. FA202 strain=FA202 na latest Scaffold Major Full 2013-04-23 ASM38020v1 DOE Joint Genome Institute GCA_000380205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/205/GCF_000380205.1_ASM38020v1/ na na na haploid bacteria 5354552 5354052 67.500000 0 3 8 NCBI RefSeq GCF_000380205.1-RS_2024_08_22 2024-08-22 4925 4803 59 na GCF_000380245.2 PRJNA224116 SAMEA2272460 CAVL000000000.2 reference genome 1243664 1243664 Bacillus massiliigorillae strain=G2 na latest Scaffold Major Full 2013-10-02 ASM38024v2 ebi GCA_000380245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/245/GCF_000380245.2_ASM38024v2/ na assembly from type material na haploid bacteria 5451072 5431566 35.000000 0 12 66 NCBI RefSeq GCF_000380245.2-RS_2025_08_06 2025-08-06 5278 5061 106 na GCF_000380285.1 PRJNA224116 SAMN02471343 AORK00000000.1 na 1188240 51365 Mycoplasma yeatsii 13926 strain=13926 na latest Contig Major Full 2013-04-23 version 1.0 EVOLMYCO GCA_000380285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/285/GCF_000380285.1_version_1.0/ na na na haploid bacteria 896612 896612 26.000000 0 57 57 NCBI RefSeq GCF_000380285.1-RS_2026_03_28 2026-03-28 799 742 36 23766401 GCF_000380335.1 PRJNA224116 SAMN01889086 na na 1283330 354 Azotobacter vinelandii CA strain=CA na latest Complete Genome Major Full 2013-04-23 ASM38033v1 North Carolina State University GCA_000380335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/335/GCF_000380335.1_ASM38033v1/ na na na haploid bacteria 5366370 5366370 65.500000 1 1 1 NCBI RefSeq GCF_000380335.1-RS_2026_02_02 2026-02-02 4927 4691 86 23792740 GCF_000380365.1 PRJNA224116 SAMN01889173 na na 1283331 354 Azotobacter vinelandii CA6 strain=CA6 na latest Complete Genome Major Full 2013-04-23 ASM38036v1 North Carolina State University GCA_000380365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/365/GCF_000380365.1_ASM38036v1/ na na na haploid bacteria 5323210 5323210 65.500000 1 1 1 NCBI RefSeq GCF_000380365.1-RS_2026_02_02 2026-02-02 4885 4651 86 23792740 GCF_000380385.1 PRJNA224116 SAMN02469750 APKY00000000.1 na 1292389 263 Francisella tularensis subsp. tularensis 1378 strain=1378 na latest Contig Major Full 2013-04-23 H643_1.0 Dugway Proving Ground GCA_000380385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/385/GCF_000380385.1_H643_1.0/ na na na haploid bacteria 1815365 1815365 32.500000 0 12 12 NCBI RefSeq GCF_000380385.1-RS_2026_01_30 2026-01-30 1895 1628 42 na GCF_000380405.1 PRJNA224116 SAMN02469749 APKX00000000.1 na 1210520 263 Francisella tularensis subsp. tularensis 80700075 strain=80700075 na latest Contig Major Full 2013-04-23 H647_1.0 Dugway Proving Ground GCA_000380405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/405/GCF_000380405.1_H647_1.0/ na na na haploid bacteria 1814135 1814135 32.500000 0 13 13 NCBI RefSeq GCF_000380405.1-RS_2026_01_30 2026-01-30 1904 1670 42 na GCF_000380425.1 PRJNA224116 SAMN02469752 APKW00000000.1 na 1292390 263 Francisella tularensis subsp. tularensis 79201237 strain=79201237 na latest Contig Major Full 2013-04-23 H646_1.0 Dugway Proving Ground GCA_000380425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/425/GCF_000380425.1_H646_1.0/ na na na haploid bacteria 1813777 1813777 32.500000 0 21 21 NCBI RefSeq GCF_000380425.1-RS_2026_01_30 2026-01-30 1899 1600 42 na GCF_000380445.1 PRJNA224116 SAMN02469751 APKV00000000.1 na 1292391 263 Francisella tularensis subsp. tularensis 80700069 strain=80700069 na latest Contig Major Full 2013-04-23 H647_1.0 Dugway Proving Ground GCA_000380445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/445/GCF_000380445.1_H647_1.0/ na na na haploid bacteria 1815320 1815320 32.500000 0 17 17 NCBI RefSeq GCF_000380445.1-RS_2026_01_30 2026-01-30 1898 1627 42 na GCF_000380485.1 PRJNA224116 SAMN02441055 AQYG00000000.1 reference genome 468556 1121721 Jongsikchunia kroppenstedtii DSM 45133 strain=NP8-5 na latest Contig Major Full 2013-04-23 ASM38048v1 DOE Joint Genome Institute GCA_000380485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/485/GCF_000380485.1_ASM38048v1/ na assembly from type material na haploid bacteria 4225368 4225368 67.000000 0 51 51 NCBI RefSeq GCF_000380485.1-RS_2026_05_02 2026-05-02 4047 3949 55 na GCF_000380505.1 PRJNA224116 SAMN02441386 AQYH00000000.1 reference genome 1122132 363259 Kaistia granuli DSM 23481 strain=Ko04 na latest Contig Major Full 2013-04-23 ASM38050v1 DOE Joint Genome Institute GCA_000380505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/505/GCF_000380505.1_ASM38050v1/ na assembly from type material na haploid bacteria 4766107 4766107 66.000000 0 20 20 NCBI RefSeq GCF_000380505.1-RS_2026_05_02 2026-05-02 4488 4413 58 na GCF_000380525.1 PRJNA224116 SAMN02441726 AQYF00000000.1 na 1158156 1158156 Thioalkalivibrio sp. AKL8 strain=AKL8 na latest Contig Major Full 2013-04-23 ASM38052v1 DOE Joint Genome Institute GCA_000380525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/525/GCF_000380525.1_ASM38052v1/ na na na haploid bacteria 2842874 2842874 66.500000 0 14 14 NCBI RefSeq GCF_000380525.1-RS_2024_12_01 2024-12-01 2699 2611 49 na GCF_000380545.1 PRJNA224116 SAMN02470113 AQPS00000000.1 na 1310164 1718 Corynebacterium glutamicum MT strain=MT na latest Contig Major Full 2013-04-23 contig Jiangxi Normal University GCA_000380545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/545/GCF_000380545.1_contig/ na na na haploid bacteria 3346700 3346700 54.000000 0 48 48 NCBI RefSeq GCF_000380545.1-RS_2025_09_16 2025-09-16 3132 3013 66 na GCF_000380565.1 PRJNA224116 SAMN02441043 AQYJ00000000.1 reference genome 1279017 266805 Microbulbifer variabilis ATCC 700307 strain=ATCC 700307 na latest Contig Major Full 2013-04-23 ASM38056v1 DOE Joint Genome Institute GCA_000380565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/565/GCF_000380565.1_ASM38056v1/ na assembly from type material na haploid bacteria 4835674 4835674 49.000000 0 29 29 NCBI RefSeq GCF_000380565.1-RS_2026_05_02 2026-05-02 4353 4258 57 na GCF_000380585.1 PRJNA224116 SAMN02440420 AQYE00000000.1 na 1158758 1158758 Thioalkalivibrio sp. ALJ9 strain=ALJ9 na latest Contig Major Full 2013-04-23 ASM38058v1 DOE Joint Genome Institute GCA_000380585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/585/GCF_000380585.1_ASM38058v1/ na na na haploid bacteria 2933045 2933045 65.500000 0 11 11 NCBI RefSeq GCF_000380585.1-RS_2024_08_13 2024-08-13 2796 2707 56 na GCF_000380625.1 PRJNA224116 SAMN02440419 AQYC00000000.1 na 1266912 1266912 Thioalkalivibrio sp. ALMg9 strain=ALMg9 na latest Scaffold Major Full 2013-04-23 ASM38062v1 DOE Joint Genome Institute GCA_000380625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/625/GCF_000380625.1_ASM38062v1/ na na na haploid bacteria 2925715 2925705 66.500000 0 9 10 NCBI RefSeq GCF_000380625.1-RS_2024_08_13 2024-08-13 2807 2715 52 na GCF_000380645.1 PRJNA224116 SAMN02441385 AQXZ00000000.1 reference genome 1123258 359359 Smaragdicoccus niigatensis DSM 44881 = NBRC 103563 strain=DSM 44881 na latest Contig Major Full 2013-04-23 ASM38064v1 DOE Joint Genome Institute GCA_000380645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/645/GCF_000380645.1_ASM38064v1/ na assembly from type material na haploid bacteria 5320466 5320466 64.500000 0 19 19 NCBI RefSeq GCF_000380645.1-RS_2026_05_02 2026-05-02 5181 5078 57 na GCF_000380665.1 PRJNA224116 SAMN02440421 AQYK00000000.1 na 1150399 1150399 Leifsonia sp. 109 strain=109 na latest Contig Major Full 2013-04-23 ASM38066v1 DOE Joint Genome Institute GCA_000380665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/665/GCF_000380665.1_ASM38066v1/ na na na haploid bacteria 4053762 4053762 70.000000 0 5 5 NCBI RefSeq GCF_000380665.1-RS_2025_08_25 2025-08-25 3921 3860 51 na GCF_000380945.1 PRJNA224116 SAMN02440997 ARKU00000000.1 na 1169165 168697 Salinispora arenicola CNY234 strain=CNY234 na latest Scaffold Major Full 2013-04-24 ASM38094v1 DOE Joint Genome Institute GCA_000380945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/945/GCF_000380945.1_ASM38094v1/ na na na haploid bacteria 5569418 5564381 69.500000 0 51 58 NCBI RefSeq GCF_000380945.1-RS_2026_05_12 2026-05-12 5019 4812 64 na GCF_000380965.1 PRJNA224116 SAMN02440998 ARKW00000000.1 reference genome 1122919 431596 Paenibacillus ginsengihumi DSM 21568 strain=DSM 21568 na latest Scaffold Major Full 2013-04-24 ASM38096v1 DOE Joint Genome Institute GCA_000380965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/965/GCF_000380965.1_ASM38096v1/ na assembly from type material na haploid bacteria 5675308 5673339 57.000000 0 144 154 NCBI RefSeq GCF_000380965.1-RS_2026_05_02 2026-05-02 5197 4938 88 na GCF_000380985.1 PRJNA224116 SAMN02440983 ARKZ00000000.1 reference genome 1123008 294710 Proteiniphilum acetatigenes DSM 18083 strain=DSM 18083 na latest Scaffold Major Full 2013-04-24 ASM38098v1 DOE Joint Genome Institute GCA_000380985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/380/985/GCF_000380985.1_ASM38098v1/ na assembly from type material na haploid bacteria 4776693 4775818 43.000000 0 37 39 NCBI RefSeq GCF_000380985.1-RS_2026_05_02 2026-05-02 3820 3711 58 na GCF_000381005.1 PRJNA224116 SAMN02440984 ARLB00000000.1 reference genome 1123250 416586 Selenomonas bovis DSM 23594 strain=DSM 23594 na latest Scaffold Major Full 2013-04-24 ASM38100v1 DOE Joint Genome Institute GCA_000381005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/005/GCF_000381005.1_ASM38100v1/ na assembly from type material na haploid bacteria 2688760 2683735 59.000000 0 75 82 NCBI RefSeq GCF_000381005.1-RS_2026_04_01 2026-04-01 2604 2499 77 na GCF_000381025.1 PRJNA224116 SAMN02440478 ARLC00000000.1 reference genome 1123321 47758 Streptomyces sulphureus DSM 40104 strain=DSM 40104 na latest Scaffold Major Full 2013-04-24 ASM38102v1 DOE Joint Genome Institute GCA_000381025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/025/GCF_000381025.1_ASM38102v1/ na assembly from type material na haploid bacteria 7104952 7102692 71.500000 0 26 34 NCBI RefSeq GCF_000381025.1-RS_2026_05_02 2026-05-02 6213 6039 73 na GCF_000381045.1 PRJNA224116 SAMN02441334 ARLD00000000.1 reference genome 1123391 37636 Thermus scotoductus DSM 8553 strain=DSM 8553 na latest Scaffold Major Full 2013-04-24 ASM38104v1 DOE Joint Genome Institute GCA_000381045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/045/GCF_000381045.1_ASM38104v1/ na assembly from type material na haploid bacteria 2070699 2069303 65.000000 0 84 91 NCBI RefSeq GCF_000381045.1-RS_2026_03_30 2026-03-30 2288 2111 58 na GCF_000381065.1 PRJNA224116 SAMN02441335 ARLE00000000.1 reference genome 1123511 86959 Propionispira raffinosivorans DSM 20765 strain=DSM 20765 na latest Scaffold Major Full 2013-04-24 ASM38106v1 DOE Joint Genome Institute GCA_000381065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/065/GCF_000381065.1_ASM38106v1/ na assembly from type material na haploid bacteria 4134382 4131539 38.000000 0 60 66 NCBI RefSeq GCF_000381065.1-RS_2025_12_10 2025-12-10 3998 3869 84 na GCF_000381085.1 PRJNA224116 SAMN02440985 ARLF00000000.1 reference genome 1123514 131540 Thiomicrorhabdus arctica DSM 13458 strain=DSM 13458 na latest Scaffold Major Full 2013-04-24 ASM38108v1 DOE Joint Genome Institute GCA_000381085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/085/GCF_000381085.1_ASM38108v1/ na assembly from type material na haploid bacteria 2552883 2552678 42.000000 0 6 8 NCBI RefSeq GCF_000381085.1-RS_2025_12_09 2025-12-09 2309 2247 55 na GCF_000381105.1 PRJNA224116 SAMN02440479 ARLG00000000.1 na 1158170 1158170 Thioalkalivibrio sp. ALE12 strain=ALE12 na latest Scaffold Major Full 2013-04-24 ASM38110v1 DOE Joint Genome Institute GCA_000381105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/105/GCF_000381105.1_ASM38110v1/ na na na haploid bacteria 2850306 2849806 67.500000 0 24 29 NCBI RefSeq GCF_000381105.1-RS_2024_08_13 2024-08-13 2788 2711 55 na GCF_000381125.1 PRJNA224116 SAMN02440480 ARLH00000000.1 reference genome 1265502 196015 Caldimonas manganoxidans ATCC BAA-369 strain=ATCC BAA-369 na latest Scaffold Major Full 2013-04-24 ASM38112v1 DOE Joint Genome Institute GCA_000381125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/125/GCF_000381125.1_ASM38112v1/ na assembly from type material na haploid bacteria 3532116 3531816 66.000000 0 89 92 NCBI RefSeq GCF_000381125.1-RS_2025_09_19 2025-09-19 3465 3323 58 na GCF_000381165.1 PRJNA224116 SAMN02440986 ARLJ00000000.1 na 1150775 1150775 Agrobacterium sp. 10MFCol1.1 strain=10MFCol1.1 na latest Scaffold Major Full 2013-04-24 ASM38116v1 DOE Joint Genome Institute GCA_000381165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/165/GCF_000381165.1_ASM38116v1/ na na na haploid bacteria 5439200 5439015 58.500000 0 28 29 NCBI RefSeq GCF_000381165.1-RS_2024_08_22 2024-08-22 5187 5088 56 na GCF_000381185.1 PRJNA224116 SAMN02440481 ARLK00000000.1 na 1158167 1158167 Thioalkalivibrio sp. ALMg13-2 strain=ALMg13-2 na latest Scaffold Major Full 2013-04-24 ASM38118v1 DOE Joint Genome Institute GCA_000381185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/185/GCF_000381185.1_ASM38118v1/ na na na haploid bacteria 3018254 3018154 66.000000 0 64 65 NCBI RefSeq GCF_000381185.1-RS_2024_08_13 2024-08-13 2938 2792 55 na GCF_000381205.1 PRJNA224116 SAMN02440987 ARLL00000000.1 na 1265494 1265494 Thioalkalivibrio sp. ALE11 strain=ALE11 na latest Scaffold Major Full 2013-04-24 ASM38120v1 DOE Joint Genome Institute GCA_000381205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/205/GCF_000381205.1_ASM38120v1/ na na na haploid bacteria 2985038 2982793 67.500000 0 55 59 NCBI RefSeq GCF_000381205.1-RS_2024_08_13 2024-08-13 2867 2749 53 na GCF_000381225.1 PRJNA224116 SAMN02441336 ARLM00000000.1 na 1158163 1158163 Thioalkalivibrio sp. ALMg3 strain=ALMg3 na latest Scaffold Major Full 2013-04-24 ASM38122v1 DOE Joint Genome Institute GCA_000381225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/225/GCF_000381225.1_ASM38122v1/ na na na haploid bacteria 2799910 2799810 66.500000 0 22 23 NCBI RefSeq GCF_000381225.1-RS_2024_08_13 2024-08-13 2671 2582 52 na GCF_000381245.1 PRJNA224116 SAMN02441337 ARLN00000000.1 na 1158150 1158150 Thioalkalivibrio sp. ALD1 strain=ALD1 na latest Scaffold Major Full 2013-04-24 ASM38124v1 DOE Joint Genome Institute GCA_000381245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/245/GCF_000381245.1_ASM38124v1/ na na na haploid bacteria 2644105 2643800 65.000000 0 12 15 NCBI RefSeq GCF_000381245.1-RS_2024_08_13 2024-08-13 2552 2477 57 na GCF_000381265.1 PRJNA224116 SAMN02440482 ARLO00000000.1 reference genome 1265504 86182 Curvibacter lanceolatus ATCC 14669 strain=ATCC 14669 na latest Scaffold Major Full 2013-04-24 ASM38126v1 DOE Joint Genome Institute GCA_000381265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/265/GCF_000381265.1_ASM38126v1/ na assembly from type material na haploid bacteria 6832523 6831845 65.500000 0 72 74 NCBI RefSeq GCF_000381265.1-RS_2026_05_02 2026-05-02 6372 6213 59 na GCF_000381285.1 PRJNA224116 SAMN02440483 ARLP00000000.1 na 1151127 75612 Pseudomonas mandelii 36MFCvi1.1 strain=36MFCvi1.1 na latest Scaffold Major Full 2013-04-24 ASM38128v1 DOE Joint Genome Institute GCA_000381285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/285/GCF_000381285.1_ASM38128v1/ na na na haploid bacteria 6553994 6551619 59.000000 0 29 35 NCBI RefSeq GCF_000381285.1-RS_2025_03_13 2025-03-13 6034 5848 72 na GCF_000381305.1 PRJNA224116 SAMN02441669 ARLQ00000000.1 na 1158172 1158172 Thioalkalivibrio sp. ALE16 strain=ALE16 na latest Scaffold Major Full 2013-04-24 ASM38130v1 DOE Joint Genome Institute GCA_000381305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/305/GCF_000381305.1_ASM38130v1/ na na na haploid bacteria 3141511 3141211 66.500000 0 39 42 NCBI RefSeq GCF_000381305.1-RS_2024_08_13 2024-08-13 3102 2977 74 na GCF_000381325.1 PRJNA224116 SAMN02441654 ARLR00000000.1 na 1158152 1158152 Thioalkalivibrio sp. AL21 strain=AL21 na latest Scaffold Major Full 2013-04-24 ASM38132v1 DOE Joint Genome Institute GCA_000381325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/325/GCF_000381325.1_ASM38132v1/ na na na haploid bacteria 2966254 2965554 65.500000 0 5 11 NCBI RefSeq GCF_000381325.1-RS_2024_08_13 2024-08-13 2891 2796 78 na GCF_000381345.1 PRJNA224116 SAMN02441322 ARLS00000000.1 reference genome 1121377 309886 Deinococcus apachensis DSM 19763 strain=DSM 19763 na latest Scaffold Major Full 2013-04-24 ASM38134v1 DOE Joint Genome Institute GCA_000381345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/345/GCF_000381345.1_ASM38134v1/ na assembly from type material na haploid bacteria 4452642 4448688 68.500000 0 52 57 NCBI RefSeq GCF_000381345.1-RS_2026_05_02 2026-05-02 4423 4264 74 na GCF_000381365.1 PRJNA224116 SAMN02596943 AQHX00000000.1 na 1121101 291644 Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 strain=DSM 18765 na latest Scaffold Major Full 2013-04-24 Bact_saly_DSM_18765_V1 Broad Institute GCA_000381365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/365/GCF_000381365.1_Bact_saly_DSM_18765_V1/ na assembly from type material na haploid bacteria 5315450 5309980 42.000000 0 6 21 NCBI RefSeq GCF_000381365.1-RS_2026_04_23 2026-04-23 4138 3987 84 na GCF_000381385.1 PRJNA224116 SAMN02441655 ARLT00000000.1 na 748651 748651 Thioalkalivibrio sp. ALE10 strain=ALE10 na latest Scaffold Major Full 2013-04-24 ASM38138v1 DOE Joint Genome Institute GCA_000381385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/385/GCF_000381385.1_ASM38138v1/ na na na haploid bacteria 2766032 2764805 67.500000 0 21 24 NCBI RefSeq GCF_000381385.1-RS_2024_08_13 2024-08-13 2666 2562 52 na GCF_000381405.1 PRJNA224116 SAMN02441323 ARLU00000000.1 na 545275 545275 Thioalkalivibrio sp. ALE20 strain=ALE20 na latest Scaffold Major Full 2013-04-24 ASM38140v1 DOE Joint Genome Institute GCA_000381405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/405/GCF_000381405.1_ASM38140v1/ na na na haploid bacteria 2845558 2844173 67.500000 0 28 34 NCBI RefSeq GCF_000381405.1-RS_2024_08_13 2024-08-13 2738 2635 53 na GCF_000381425.1 PRJNA224116 SAMN02440484 ARLV00000000.1 na 1266911 1266911 Thioalkalivibrio sp. ALRh strain=ALRh na latest Scaffold Major Full 2013-04-24 ASM38142v1 DOE Joint Genome Institute GCA_000381425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/425/GCF_000381425.1_ASM38142v1/ na na na haploid bacteria 2747676 2746953 66.000000 0 14 19 NCBI RefSeq GCF_000381425.1-RS_2024_08_13 2024-08-13 2626 2551 56 na GCF_000381445.1 PRJNA224116 SAMN02441656 ARLW00000000.1 na 1158176 1158176 Thioalkalivibrio sp. ALE22 strain=ALE22 na latest Scaffold Major Full 2013-04-24 ASM38144v1 DOE Joint Genome Institute GCA_000381445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/445/GCF_000381445.1_ASM38144v1/ na na na haploid bacteria 2748237 2746407 67.500000 0 20 22 NCBI RefSeq GCF_000381445.1-RS_2024_08_13 2024-08-13 2656 2579 54 na GCF_000381465.1 PRJNA224116 SAMN02440485 ARLX00000000.1 na 1158174 1158174 Thioalkalivibrio sp. ALE18 strain=ALE18 na latest Scaffold Major Full 2013-04-24 ASM38146v1 DOE Joint Genome Institute GCA_000381465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/465/GCF_000381465.1_ASM38146v1/ na na na haploid bacteria 2767238 2766738 67.500000 0 23 26 NCBI RefSeq GCF_000381465.1-RS_2024_08_13 2024-08-13 2671 2570 52 na GCF_000381485.1 PRJNA224116 SAMN02441324 ARLY00000000.1 na 1158162 1158162 Thioalkalivibrio sp. ALgr5 strain=ALgr5 na latest Scaffold Major Full 2013-04-24 ASM38148v1 DOE Joint Genome Institute GCA_000381485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/485/GCF_000381485.1_ASM38148v1/ na na na haploid bacteria 2853770 2851910 67.000000 0 23 28 NCBI RefSeq GCF_000381485.1-RS_2024_08_13 2024-08-13 2771 2666 57 na GCF_000381505.1 PRJNA224116 SAMN02441657 ARLZ00000000.1 na 1158184 1158184 Thioalkalivibrio sp. ALM2T strain=ALM2T na latest Scaffold Major Full 2013-04-24 ASM38150v1 DOE Joint Genome Institute GCA_000381505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/505/GCF_000381505.1_ASM38150v1/ na na na haploid bacteria 2924114 2924049 66.000000 0 26 29 NCBI RefSeq GCF_000381505.1-RS_2024_08_13 2024-08-13 2791 2700 54 na GCF_000381525.1 PRJNA224116 SAMN02441325 ARMA00000000.1 na 1035196 1261 Peptostreptococcus anaerobius VPI 4330 = DSM 2949 strain=DSM 2949 na latest Scaffold Major Full 2013-04-24 ASM38152v1 DOE Joint Genome Institute GCA_000381525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/525/GCF_000381525.1_ASM38152v1/ na assembly from type material na haploid bacteria 2106935 2106103 35.500000 0 68 72 NCBI RefSeq GCF_000381525.1-RS_2026_04_21 2026-04-21 2039 1942 54 na GCF_000381545.1 PRJNA224116 SAMN02441658 ARMB00000000.1 na 1123057 336828 Rhodonellum psychrophilum GCM71 = DSM 17998 strain=DSM 17998 na latest Scaffold Major Full 2013-04-24 ASM38154v1 DOE Joint Genome Institute GCA_000381545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/545/GCF_000381545.1_ASM38154v1/ na assembly from type material na haploid bacteria 5193701 5185502 42.000000 0 51 62 NCBI RefSeq GCF_000381545.1-RS_2025_12_11 2025-12-11 4241 4164 45 na GCF_000381645.1 PRJNA224116 SAMN02440489 ARMG00000000.1 na 1073969 2426 Teredinibacter turnerae T8402 strain=T8402 na latest Scaffold Major Full 2013-04-24 ASM38164v1 DOE Joint Genome Institute GCA_000381645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/645/GCF_000381645.1_ASM38164v1/ na na na haploid bacteria 5166130 5160666 51.000000 0 27 33 NCBI RefSeq GCF_000381645.1-RS_2026_01_30 2026-01-30 4163 4100 45 na GCF_000381665.1 PRJNA224116 SAMN02440988 ARMH00000000.1 na 1056819 2426 Teredinibacter turnerae T8412 strain=T8412 na latest Scaffold Major Full 2013-04-24 ASM38166v1 DOE Joint Genome Institute GCA_000381665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/665/GCF_000381665.1_ASM38166v1/ na na na haploid bacteria 5147360 5142266 51.000000 0 58 65 NCBI RefSeq GCF_000381665.1-RS_2026_01_30 2026-01-30 4181 4105 43 na GCF_000381685.1 PRJNA224116 SAMN02441659 ARMI00000000.1 na 1169153 1169153 Nocardiopsis sp. CNS-639 strain=CNS639 na latest Scaffold Major Full 2013-04-24 ASM38168v1 DOE Joint Genome Institute GCA_000381685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/685/GCF_000381685.1_ASM38168v1/ na na na haploid bacteria 6845276 6839965 72.500000 0 52 62 NCBI RefSeq GCF_000381685.1-RS_2024_10_21 2024-10-21 5867 5740 68 na GCF_000381705.1 PRJNA224116 SAMN02441327 ARMJ00000000.1 na 1158155 1158155 Thioalkalivibrio sp. AKL7 strain=AKL7 na latest Scaffold Major Full 2013-04-24 ASM38170v1 DOE Joint Genome Institute GCA_000381705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/705/GCF_000381705.1_ASM38170v1/ na na na haploid bacteria 2874105 2874005 66.500000 0 20 21 NCBI RefSeq GCF_000381705.1-RS_2024_08_12 2024-08-12 2745 2647 56 na GCF_000381725.1 PRJNA224116 SAMN02441328 ARMK00000000.1 reference genome 1278306 854 Fusobacterium russii ATCC 25533 strain=593A na latest Scaffold Major Full 2013-04-24 ASM38172v1 DOE Joint Genome Institute GCA_000381725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/725/GCF_000381725.1_ASM38172v1/ na assembly from type material na haploid bacteria 1941804 1935478 28.500000 0 41 46 NCBI RefSeq GCF_000381725.1-RS_2026_05_02 2026-05-02 1804 1724 54 na GCF_000381745.1 PRJNA224116 SAMN02441329 ARML00000000.1 reference genome 1278307 444922 Psychromonas ossibalaenae ATCC BAA-1528 strain=JAMM 0738 na latest Scaffold Major Full 2013-04-24 ASM38174v1 DOE Joint Genome Institute GCA_000381745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/745/GCF_000381745.1_ASM38174v1/ na assembly from type material na haploid bacteria 5204311 5202369 42.000000 0 107 114 NCBI RefSeq GCF_000381745.1-RS_2026_05_02 2026-05-02 4560 4429 68 na GCF_000381765.1 PRJNA224116 SAMN02440490 ARMM00000000.1 reference genome 1278308 272240 [Zimmermannella] faecalis ATCC 13722 strain=B187 na latest Scaffold Major Full 2013-04-24 ASM38176v1 DOE Joint Genome Institute GCA_000381765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/765/GCF_000381765.1_ASM38176v1/ na assembly from type material na haploid bacteria 2847348 2847263 68.500000 0 17 18 NCBI RefSeq GCF_000381765.1-RS_2026_03_30 2026-03-30 2679 2604 53 na GCF_000381785.1 PRJNA224116 SAMN02440491 ARMN00000000.1 na 1278309 452627 Amphritea japonica ATCC BAA-1530 strain=JAMM 1866 na latest Scaffold Major Full 2013-04-24 ASM38178v1 DOE Joint Genome Institute GCA_000381785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/785/GCF_000381785.1_ASM38178v1/ na assembly from type material na haploid bacteria 3799525 3796376 47.500000 0 22 28 NCBI RefSeq GCF_000381785.1-RS_2026_04_26 2026-04-26 3522 3450 67 na GCF_000381825.1 PRJNA224116 SAMN02441660 ARMP00000000.1 na 1158146 1158146 Thioalkalivibrio sp. ALJT strain=ALJT na latest Scaffold Major Full 2013-04-24 ASM38182v1 DOE Joint Genome Institute GCA_000381825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/825/GCF_000381825.1_ASM38182v1/ na na na haploid bacteria 2659308 2658093 66.000000 0 21 24 NCBI RefSeq GCF_000381825.1-RS_2024_08_12 2024-08-12 2531 2430 52 na GCF_000381845.1 PRJNA224116 SAMN02441314 ARMQ00000000.1 na 1158158 1158158 Thioalkalivibrio sp. AKL10 strain=AKL10 na latest Scaffold Major Full 2013-04-24 ASM38184v1 DOE Joint Genome Institute GCA_000381845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/845/GCF_000381845.1_ASM38184v1/ na na na haploid bacteria 2986682 2986102 66.000000 0 8 10 NCBI RefSeq GCF_000381845.1-RS_2024_08_13 2024-08-13 2830 2729 53 na GCF_000381865.1 PRJNA224116 SAMN02441661 ARMR00000000.1 na 1202962 90736 Moritella marina ATCC 15381 strain=MP-1 na latest Scaffold Major Full 2013-04-24 ASM38186v1 DOE Joint Genome Institute GCA_000381865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/865/GCF_000381865.1_ASM38186v1/ na assembly from type material na haploid bacteria 4646784 4645639 40.500000 0 58 63 NCBI RefSeq GCF_000381865.1-RS_2026_04_29 2026-04-29 4214 4093 88 na GCF_000381885.1 PRJNA224116 SAMN02441315 ARMS00000000.1 reference genome 1120936 1990 Actinomadura atramentaria DSM 43919 strain=SF2197 na latest Scaffold Major Full 2013-04-24 ASM38188v1 DOE Joint Genome Institute GCA_000381885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/885/GCF_000381885.1_ASM38188v1/ na assembly from type material na haploid bacteria 6710579 6709047 73.500000 0 37 48 NCBI RefSeq GCF_000381885.1-RS_2026_03_30 2026-03-30 6371 6249 75 na GCF_000381905.1 PRJNA224116 SAMN02441316 ARMT00000000.1 reference genome 1122918 379896 Paenibacillus fonticola DSM 21315 strain=DSM 21315 na latest Scaffold Major Full 2013-04-24 ASM38190v1 DOE Joint Genome Institute GCA_000381905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/905/GCF_000381905.1_ASM38190v1/ na assembly from type material na haploid bacteria 6309271 6304955 47.500000 0 62 77 NCBI RefSeq GCF_000381905.1-RS_2026_03_30 2026-03-30 5674 5486 88 na GCF_000381925.1 PRJNA224116 SAMN02440989 ARMU00000000.1 na 1160137 1160137 Nocardia sp. BMG111209 strain=BMG111209 na latest Scaffold Major Full 2013-04-24 ASM38192v1 DOE Joint Genome Institute GCA_000381925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/925/GCF_000381925.1_ASM38192v1/ na na na haploid bacteria 9143142 9142501 69.000000 0 5 6 NCBI RefSeq GCF_000381925.1-RS_2024_08_13 2024-08-13 8175 8033 62 na GCF_000381965.1 PRJNA224116 SAMN02440493 ARMW00000000.1 reference genome 1279015 264574 Oceanimonas smirnovii ATCC BAA-899 strain=ATCC BAA-899 na latest Scaffold Major Full 2013-04-24 ASM38196v1 DOE Joint Genome Institute GCA_000381965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/965/GCF_000381965.1_ASM38196v1/ na assembly from type material na haploid bacteria 3282720 3282120 56.000000 0 27 28 NCBI RefSeq GCF_000381965.1-RS_2026_05_02 2026-05-02 3188 3089 87 na GCF_000381985.1 PRJNA224116 SAMN02441318 ARMX00000000.1 reference genome 1279038 189 Novispirillum itersonii subsp. itersonii ATCC 12639 strain=ATCC 12639 na latest Scaffold Major Full 2013-04-24 ASM38198v1 DOE Joint Genome Institute GCA_000381985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/985/GCF_000381985.1_ASM38198v1/ na assembly from type material na haploid bacteria 4290651 4289611 63.000000 0 34 39 NCBI RefSeq GCF_000381985.1-RS_2025_12_09 2025-12-09 3912 3817 69 na GCF_000382005.1 PRJNA224116 SAMN02440494 ARMY00000000.1 na 1279016 43662 Pseudoalteromonas piscicida ATCC 15057 strain=ATCC 15057 na latest Scaffold Major Full 2013-04-24 ASM38200v1 DOE Joint Genome Institute GCA_000382005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/005/GCF_000382005.1_ASM38200v1/ na assembly from type material na haploid bacteria 5277109 5271905 43.000000 0 58 75 NCBI RefSeq GCF_000382005.1-RS_2026_03_30 2026-03-30 4709 4540 91 na GCF_000382045.1 PRJNA224116 SAMN02440495 ARNA00000000.1 na 1157708 3394203 Variovorax atrisoli 110B strain=110B na latest Scaffold Major Full 2013-04-24 ASM38204v1 DOE Joint Genome Institute GCA_000382045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/045/GCF_000382045.1_ASM38204v1/ na na na haploid bacteria 7515890 7515245 67.500000 0 48 50 NCBI RefSeq GCF_000382045.1-RS_2025_08_15 2025-08-15 7087 6954 65 na GCF_000382065.1 PRJNA224116 SAMN02441648 ARNB00000000.1 reference genome 1279018 86189 Stenotrophomonas hibiscicola ATCC 19867 strain=ATCC 19867 na latest Scaffold Major Full 2013-04-24 ASM38206v1 DOE Joint Genome Institute GCA_000382065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/065/GCF_000382065.1_ASM38206v1/ na assembly from type material na haploid bacteria 4424025 4421535 66.500000 0 14 20 NCBI RefSeq GCF_000382065.1-RS_2026_05_02 2026-05-02 4089 3979 77 na GCF_000382125.1 PRJNA224116 SAMN02440497 ARNE00000000.1 reference genome 1121875 446681 Eudoraea adriatica DSM 19308 strain=DSM 19308 na latest Scaffold Major Full 2013-04-24 ASM38212v1 DOE Joint Genome Institute GCA_000382125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/125/GCF_000382125.1_ASM38212v1/ na assembly from type material na haploid bacteria 3906474 3902741 38.500000 0 19 22 NCBI RefSeq GCF_000382125.1-RS_2025_12_11 2025-12-11 3492 3416 49 na GCF_000382145.1 PRJNA224116 SAMN02441319 ARNF00000000.1 na 1123033 540500 Psychrobacter lutiphocae DSM 21542 strain=DSM 21542 na latest Scaffold Major Full 2013-04-24 ASM38214v1 DOE Joint Genome Institute GCA_000382145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/145/GCF_000382145.1_ASM38214v1/ na assembly from type material na haploid bacteria 3176011 3172127 41.500000 0 79 89 NCBI RefSeq GCF_000382145.1-RS_2025_12_23 2025-12-23 2685 2571 53 na GCF_000382165.1 PRJNA224116 SAMN02441649 ARNG00000000.1 reference genome 1123054 368811 Arsukibacterium perlucidum DSM 18276 strain=DSM 18276 na latest Scaffold Major Full 2013-04-24 ASM38216v1 DOE Joint Genome Institute GCA_000382165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/165/GCF_000382165.1_ASM38216v1/ na assembly from type material na haploid bacteria 4000424 3997788 48.500000 0 83 85 NCBI RefSeq GCF_000382165.1-RS_2026_03_30 2026-03-30 3776 3670 60 na GCF_000382185.1 PRJNA224116 SAMN02440498 ARNH00000000.1 na 1159870 1159870 Bordetella sp. FB-8 strain=FB-8 na latest Scaffold Major Full 2013-04-24 ASM38218v1 DOE Joint Genome Institute GCA_000382185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/185/GCF_000382185.1_ASM38218v1/ na na na haploid bacteria 4079718 4072817 63.500000 0 2 6 NCBI RefSeq GCF_000382185.1-RS_2024_08_13 2024-08-13 3884 3749 63 na GCF_000382205.1 PRJNA224116 SAMN02441320 ARNI00000000.1 reference genome 1121482 365489 Dyadobacter beijingensis DSM 21582 strain=DSM 21582 na latest Scaffold Major Full 2013-04-24 ASM38220v1 DOE Joint Genome Institute GCA_000382205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/205/GCF_000382205.1_ASM38220v1/ na assembly from type material na haploid bacteria 7376607 7374547 52.000000 0 14 16 NCBI RefSeq GCF_000382205.1-RS_2025_09_16 2025-09-16 6045 5969 50 na GCF_000382225.1 PRJNA224116 SAMN02441650 ARNJ00000000.1 reference genome 1121953 119644 Hymenobacter aerophilus DSM 13606 strain=DSM 13606 na latest Scaffold Major Full 2013-04-24 ASM38222v1 DOE Joint Genome Institute GCA_000382225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/225/GCF_000382225.1_ASM38222v1/ na assembly from type material na haploid bacteria 4253037 4252252 62.000000 0 62 65 NCBI RefSeq GCF_000382225.1-RS_2025_12_11 2025-12-11 3825 3740 52 na GCF_000382245.1 PRJNA224116 SAMN02440978 ARNK00000000.1 reference genome 1122139 504092 Kushneria aurantia DSM 21353 strain=DSM 21353 na latest Scaffold Major Full 2013-04-24 ASM38224v1 DOE Joint Genome Institute GCA_000382245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/245/GCF_000382245.1_ASM38224v1/ na assembly from type material na haploid bacteria 3750691 3743436 63.000000 0 63 72 NCBI RefSeq GCF_000382245.1-RS_2026_05_02 2026-05-02 3604 3457 67 na GCF_000382265.1 PRJNA224116 SAMN02440979 ARNL00000000.1 reference genome 1122181 245188 Yoonia vestfoldensis DSM 16212 strain=DSM 16212 na latest Scaffold Major Full 2013-04-24 ASM38226v1 DOE Joint Genome Institute GCA_000382265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/265/GCF_000382265.1_ASM38226v1/ na assembly from type material na haploid bacteria 3721596 3718082 62.000000 0 45 49 NCBI RefSeq GCF_000382265.1-RS_2025_09_23 2025-09-23 3795 3704 60 na GCF_000382285.1 PRJNA224116 SAMN02440980 ARNM00000000.1 reference genome 1123256 254408 Solimonas variicoloris DSM 15731 strain=DSM 15731 na latest Scaffold Major Full 2013-04-24 ASM38228v1 DOE Joint Genome Institute GCA_000382285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/285/GCF_000382285.1_ASM38228v1/ na assembly from type material na haploid bacteria 4119451 4117958 69.000000 0 48 52 NCBI RefSeq GCF_000382285.1-RS_2025_07_15 2025-07-15 3837 3728 55 na GCF_000382305.1 PRJNA224116 SAMN02441651 ARNN00000000.1 na 1123499 61 Vitreoscilla stercoraria DSM 513 strain=DSM 513 na latest Scaffold Major Full 2013-04-24 ASM38230v1 DOE Joint Genome Institute GCA_000382305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/305/GCF_000382305.1_ASM38230v1/ na assembly from type material na haploid bacteria 2581302 2580402 44.000000 0 38 41 NCBI RefSeq GCF_000382305.1-RS_2026_05_02 2026-05-02 2583 2472 75 na GCF_000382325.1 PRJNA224116 SAMN02440981 ARNO00000000.1 reference genome 1123503 240237 Woodsholea maritima DSM 17123 strain=DSM 17123 na latest Scaffold Major Full 2013-04-24 ASM38232v1 DOE Joint Genome Institute GCA_000382325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/325/GCF_000382325.1_ASM38232v1/ na assembly from type material na haploid bacteria 3105947 3103862 55.500000 0 20 25 NCBI RefSeq GCF_000382325.1-RS_2025_12_09 2025-12-09 2920 2854 53 na GCF_000382345.1 PRJNA224116 SAMN02441321 ARNP00000000.1 reference genome 1122215 544911 Massilia niastensis DSM 21313 strain=DSM 21313 na latest Scaffold Major Full 2013-04-24 ASM38234v1 DOE Joint Genome Institute GCA_000382345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/345/GCF_000382345.1_ASM38234v1/ na assembly from type material na haploid bacteria 6594487 6590952 66.500000 0 139 143 NCBI RefSeq GCF_000382345.1-RS_2025_08_26 2025-08-26 5996 5778 80 na GCF_000382365.1 PRJNA224116 SAMN02441652 ARNQ00000000.1 na 1122929 121719 Pannonibacter phragmitetus DSM 14782 strain=DSM 14782 na latest Scaffold Major Full 2013-04-24 ASM38236v1 DOE Joint Genome Institute GCA_000382365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/365/GCF_000382365.1_ASM38236v1/ na assembly from type material na haploid bacteria 4783755 4780110 63.000000 0 40 46 NCBI RefSeq GCF_000382365.1-RS_2026_05_13 2026-05-13 4304 4216 57 na GCF_000382385.1 PRJNA224116 SAMN02440499 ARNR00000000.1 na 1122986 439703 Segatella maculosa DSM 19339 = JCM 15638 strain=DSM 19339 na latest Scaffold Major Full 2013-04-24 ASM38238v1 DOE Joint Genome Institute GCA_000382385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/385/GCF_000382385.1_ASM38238v1/ na assembly from type material na haploid bacteria 3314235 3312100 47.500000 0 60 63 NCBI RefSeq GCF_000382385.1-RS_2025_12_02 2025-12-02 2706 2581 58 na GCF_000382405.1 PRJNA224116 SAMN02441653 ARNS00000000.1 na 1120797 1120797 Mycobacterium sp. 141 strain=141 na latest Scaffold Major Full 2013-04-24 ASM38240v1 DOE Joint Genome Institute GCA_000382405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/405/GCF_000382405.1_ASM38240v1/ na na na haploid bacteria 4535740 4535640 65.500000 0 36 37 NCBI RefSeq GCF_000382405.1-RS_2024_08_13 2024-08-13 4394 4176 59 na GCF_000382425.1 PRJNA224116 SAMN02440982 ARNT00000000.1 reference genome 1218108 247 Empedobacter brevis NBRC 14943 = ATCC 43319 strain=ATCC 43319 na latest Scaffold Major Full 2013-04-24 ASM38242v1 DOE Joint Genome Institute GCA_000382425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/425/GCF_000382425.1_ASM38242v1/ na assembly from type material na haploid bacteria 3792478 3790512 32.500000 0 28 32 NCBI RefSeq GCF_000382425.1-RS_2026_03_31 2026-03-31 3614 3527 69 na GCF_000382445.1 PRJNA224116 SAMN02596944 AQHY00000000.1 reference genome 1121098 204516 Phocaeicola massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 strain=DSM 17679 na latest Scaffold Major Full 2013-04-24 Bact_mass_DSM_17679_V1 Broad Institute GCA_000382445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/445/GCF_000382445.1_Bact_mass_DSM_17679_V1/ na assembly from type material na haploid bacteria 4646209 4564584 42.500000 0 15 55 NCBI RefSeq GCF_000382445.1-RS_2026_01_08 2026-01-08 3948 3762 87 na GCF_000382465.1 PRJNA224116 SAMN02596735 AGEU00000000.1 na 1078089 1078089 Bacteroides sp. HPS0048 strain=HPS0048 na latest Scaffold Major Full 2013-04-24 Bact_sp_HPS0048_V1 Broad Institute GCA_000382465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/465/GCF_000382465.1_Bact_sp_HPS0048_V1/ na na na haploid bacteria 6096022 5966298 40.500000 0 10 83 NCBI RefSeq GCF_000382465.1-RS_2025_01_07 2025-01-07 4779 4599 67 na GCF_000382485.1 PRJNA224116 SAMN00626992 AORY00000000.1 na 629773 629773 Sphingomonas sp. Mn802worker strain=Mn802worker na latest Contig Major Full 2013-04-24 Mn802 JGI GCA_000382485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/485/GCF_000382485.1_Mn802/ na na na haploid bacteria 3185459 3185459 66.500000 0 21 21 NCBI RefSeq GCF_000382485.1-RS_2025_08_27 2025-08-27 3176 3084 51 23563954 GCF_000382505.1 PRJNA224116 SAMN01902219 AOMY00000000.1 na 1325475 632 Yersinia pestis G1670E strain=G1670E na latest Contig Major Full 2013-04-25 Yersinia pestis G1670E assembly University of Florida GCA_000382505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/505/GCF_000382505.1_Yersinia_pestis_G1670E_assembly/ na na na haploid bacteria 4532024 4532024 47.500000 0 214 214 NCBI RefSeq GCF_000382505.1-RS_2026_06_01 2026-06-01 4153 3834 71 23521061 GCF_000382545.1 PRJNA224116 SAMN01909378 AOSA00000000.1 na 1291550 632 Yersinia pestis G1670A strain=G1670A na latest Contig Major Full 2013-04-25 Yersinia pestis assembly US Army Edgewood Chemical Biological Center GCA_000382545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/545/GCF_000382545.1_Yersinia_pestis_assembly/ na na na haploid bacteria 4542438 4542438 47.500000 0 208 208 NCBI RefSeq GCF_000382545.1-RS_2026_05_30 2026-05-30 4179 3865 75 23521061 GCF_000382565.1 PRJNA224116 SAMN02471616 ADMY00000000.1 na 747491 139 Borreliella burgdorferi CA8 strain=CA8 na latest Contig Major Full 2013-04-25 ASM38256v1 University of California, Irvine GCA_000382565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/565/GCF_000382565.1_ASM38256v1/ na na na haploid bacteria 903130 903130 28.500000 0 7 7 NCBI RefSeq GCF_000382565.1-RS_2025_04_24 2025-04-24 857 810 38 na GCF_000382585.2 PRJNA224116 SAMN01991085 na na 1308956 204042 Dickeya zeae MS1 strain=MS1 na latest Complete Genome Major Full 2022-01-26 ASM38258v2 Plant Protection Research Institute, Guangdong Academy of Agricultural Science, P. R. China GCA_000382585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/585/GCF_000382585.2_ASM38258v2/ na na na haploid bacteria 4831702 4831702 53.500000 1 1 1 NCBI RefSeq GCF_000382585.2-RS_2026_01_30 2026-01-30 4344 4149 107 23766402 GCF_000382705.1 PRJNA224116 SAMN02440500 ARQE00000000.1 na 1121028 401562 Aureimonas ureilytica DSM 18598 = NBRC 106430 strain=DSM 18598 na latest Contig Major Full 2013-04-25 ASM38270v1 DOE Joint Genome Institute GCA_000382705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/705/GCF_000382705.1_ASM38270v1/ na assembly from type material na haploid bacteria 5087183 5087183 67.500000 0 44 44 NCBI RefSeq GCF_000382705.1-RS_2025_12_23 2025-12-23 4848 4726 57 na GCF_000382745.1 PRJNA224116 SAMN02441645 ARPI00000000.1 na 1155717 1155717 Streptomyces sp. DvalAA-83 strain=DvalAA-83 na latest Contig Major Full 2013-04-25 ASM38274v1 DOE Joint Genome Institute GCA_000382745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/745/GCF_000382745.1_ASM38274v1/ na na na haploid bacteria 7452860 7452860 72.000000 0 31 31 NCBI RefSeq GCF_000382745.1-RS_2025_08_25 2025-08-25 6684 6466 79 na GCF_000382805.1 PRJNA224116 SAMEA2272693 CAUJ00000000.1 na 1297534 1303 Streptococcus oralis subsp. dentisani 7746 strain=CECT 7746 na latest Scaffold Major Full 2013-04-23 ASM38280v1 CSISP GCA_000382805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/805/GCF_000382805.1_ASM38280v1/ na na na haploid bacteria 1981087 1972805 41.000000 0 8 17 NCBI RefSeq GCF_000382805.1-RS_2025_02_03 2025-02-03 1961 1871 43 24006481 GCF_000382825.1 PRJNA224116 SAMEA2272194 CAUK00000000.1 na 1297857 1303 Streptococcus oralis subsp. dentisani 7747 strain=CECT 7747 na latest Scaffold Major Full 2013-04-23 ASM38282v1 CSISP GCA_000382825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/825/GCF_000382825.1_ASM38282v1/ na assembly from type material na haploid bacteria 1884389 1868539 41.000000 0 6 23 NCBI RefSeq GCF_000382825.1-RS_2025_12_23 2025-12-23 1833 1737 32 24006481 GCF_000382845.1 PRJNA224116 SAMEA2272577 CAVI000000000.1 na 1301086 1301086 Bacillus sp. GeD10 strain=GeD10 na latest Scaffold Major Full 2013-04-23 ASM38284v1 MDA GCA_000382845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/845/GCF_000382845.1_ASM38284v1/ na na na haploid bacteria 5865695 5864895 35.000000 0 327 351 NCBI RefSeq GCF_000382845.1-RS_2025_08_25 2025-08-25 6258 5841 69 na GCF_000382885.1 PRJNA224116 SAMEA2272001 CAVK000000000.1 na 1301087 332055 Sphingobium indicum BiD32 strain=BiD32 na latest Scaffold Major Full 2013-04-23 ASM38288v1 MDA GCA_000382885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/885/GCF_000382885.1_ASM38288v1/ na na na haploid bacteria 4788005 4787921 62.500000 0 262 264 NCBI RefSeq GCF_000382885.1-RS_2025_08_15 2025-08-15 4721 4553 54 na GCF_000382905.1 PRJNA224116 SAMEA3138433 na na 1204414 1718 Corynebacterium glutamicum K051 strain=ATCC 13032 substr. K051 na latest Complete Genome Major Full 2012-04-23 ASM38290v1 Forschungszentrum Juelich GmbH GCA_000382905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/905/GCF_000382905.1_ASM38290v1/ na assembly from type material na haploid bacteria 3309400 3309400 54.000000 1 1 1 NCBI RefSeq GCF_000382905.1-RS_2026_02_16 2026-02-16 3081 2946 80 22640862 GCF_000382965.1 PRJNA224116 SAMEA2272458 na na 1074919 1280 Staphylococcus aureus subsp. aureus ST228 strain=ST228 16035 latest Complete Genome Major Full 2012-10-05 ASM38296v1 Swiss Institute of Bioinformatics - Vital-IT group GCA_000382965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/965/GCF_000382965.1_ASM38296v1/ na na na haploid bacteria 2790688 2790688 33.000000 2 2 2 NCBI RefSeq GCF_000382965.1-RS_2025_05_23 2025-05-23 2761 2589 81 22720005 GCF_000382985.1 PRJNA224116 SAMEA2272299 na na 1074919 1280 Staphylococcus aureus subsp. aureus ST228 strain=ST228 16125 latest Complete Genome Major Full 2012-10-05 ASM38298v1 Swiss Institute of Bioinformatics - Vital-IT group GCA_000382985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/382/985/GCF_000382985.1_ASM38298v1/ na na na haploid bacteria 2796742 2796742 33.000000 2 2 2 NCBI RefSeq GCF_000382985.1-RS_2025_03_20 2025-03-20 2762 2592 81 22720005 GCF_000383005.1 PRJNA224116 SAMEA2272502 na na 1074919 1280 Staphylococcus aureus subsp. aureus ST228 strain=ST228 18583 latest Complete Genome Major Full 2012-10-05 ASM38300v1 Swiss Institute of Bioinformatics - Vital-IT group GCA_000383005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/005/GCF_000383005.1_ASM38300v1/ na na na haploid bacteria 2783086 2783086 33.000000 2 2 2 NCBI RefSeq GCF_000383005.1-RS_2025_05_23 2025-05-23 2758 2589 82 22720005 GCF_000383095.1 PRJNA224116 SAMN00626993 AORL00000000.1 na 685778 685778 Sphingomonas sp. PR090111-T3T-6A strain=PR090111-T3T6A na latest Contig Major Full 2013-04-26 4088801 JGI GCA_000383095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/095/GCF_000383095.1_4088801/ na na na haploid bacteria 3910956 3910956 67.500000 0 25 25 NCBI RefSeq GCF_000383095.1-RS_2025_08_25 2025-08-25 3789 3709 55 23563954 GCF_000383235.1 PRJNA224116 SAMN02440515 ARSX00000000.1 na 1169144 1169144 Bacillus sp. 123MFChir2 strain=123MFChir2 na latest Scaffold Major Full 2013-04-26 ASM38323v1 DOE Joint Genome Institute GCA_000383235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/235/GCF_000383235.1_ASM38323v1/ na na na haploid bacteria 4374223 4374023 36.000000 0 110 112 NCBI RefSeq GCF_000383235.1-RS_2025_08_25 2025-08-25 4484 4138 72 na GCF_000383255.1 PRJNA224116 SAMN02441635 ARSY00000000.1 na 1266923 159 Brachyspira hyodysenteriae ATCC 27164 strain=B78 na latest Scaffold Major Full 2013-04-26 ASM38325v1 DOE Joint Genome Institute GCA_000383255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/255/GCF_000383255.1_ASM38325v1/ na assembly from type material na haploid bacteria 3050489 3045770 27.000000 0 46 52 NCBI RefSeq GCF_000383255.1-RS_2025_07_21 2025-07-21 2707 2639 40 na GCF_000383275.1 PRJNA224116 SAMN02440516 ARSZ00000000.1 reference genome 134536 134536 Paraburkholderia caledonica strain=376MFSha3.1 na latest Scaffold Major Full 2013-04-26 ASM38327v1 DOE Joint Genome Institute GCA_000383275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/275/GCF_000383275.1_ASM38327v1/ na na na haploid bacteria 7381819 7381719 62.000000 0 32 33 NCBI RefSeq GCF_000383275.1-RS_2025_12_15 2025-12-15 6571 6445 57 na GCF_000383295.1 PRJNA224116 SAMN02441299 ARTA00000000.1 reference genome 1121334 1549 Faecalispora sporosphaeroides DSM 1294 strain=VPI 4527 na latest Scaffold Major Full 2013-04-26 ASM38329v1 DOE Joint Genome Institute GCA_000383295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/295/GCF_000383295.1_ASM38329v1/ na assembly from type material na haploid bacteria 3174421 3173517 53.500000 0 21 24 NCBI RefSeq GCF_000383295.1-RS_2025_12_10 2025-12-10 3091 3009 58 na GCF_000383315.1 PRJNA224116 SAMN02440964 ARTB00000000.1 na 1169145 1169145 Cryocola sp. 340MFSha3.1 strain=340MFSha3.1 na latest Scaffold Major Full 2013-04-26 ASM38331v1 DOE Joint Genome Institute GCA_000383315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/315/GCF_000383315.1_ASM38331v1/ na na na haploid bacteria 4090615 4090415 70.000000 0 2 4 NCBI RefSeq GCF_000383315.1-RS_2024_07_01 2024-07-01 3949 3887 51 na GCF_000383335.1 PRJNA224116 SAMN02440965 ARTC00000000.1 na 685445 548 Klebsiella aerogenes FGI35 strain=FGI35 na latest Scaffold Major Full 2013-04-26 ASM38333v1 DOE Joint Genome Institute GCA_000383335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/335/GCF_000383335.1_ASM38333v1/ na na na haploid bacteria 5143280 5142580 55.000000 0 1 8 NCBI RefSeq GCF_000383335.1-RS_2026_04_04 2026-04-04 4863 4695 105 na GCF_000383415.1 PRJNA224116 SAMN02440966 ARTG00000000.1 reference genome 1267005 48292 Hyphomicrobium zavarzinii ATCC 27496 strain=ZV-622 na latest Scaffold Major Full 2013-04-26 ASM38341v1 DOE Joint Genome Institute GCA_000383415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/415/GCF_000383415.1_ASM38341v1/ na assembly from type material na haploid bacteria 4651795 4646325 63.500000 0 15 20 NCBI RefSeq GCF_000383415.1-RS_2026_04_29 2026-04-29 4307 4223 55 na GCF_000383435.1 PRJNA224116 SAMN02441638 ARTH00000000.1 na 1267003 357278 Levilactobacillus parabrevis ATCC 53295 strain=RODS-DW na latest Scaffold Major Full 2013-04-26 ASM38343v1 DOE Joint Genome Institute GCA_000383435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/435/GCF_000383435.1_ASM38343v1/ na assembly from type material na haploid bacteria 2631123 2629447 49.000000 0 94 95 NCBI RefSeq GCF_000383435.1-RS_2025_09_10 2025-09-10 2488 2375 66 na GCF_000383455.1 PRJNA224116 SAMN02441639 ARTI00000000.1 na 1172187 1172187 Methylobacterium sp. 285MFTsu5.1 strain=285MFTsu5.1 na latest Scaffold Major Full 2013-04-26 ASM38345v1 DOE Joint Genome Institute GCA_000383455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/455/GCF_000383455.1_ASM38345v1/ na na na haploid bacteria 6628554 6627998 71.000000 0 95 99 NCBI RefSeq GCF_000383455.1-RS_2024_06_03 2024-06-03 6402 6206 63 na GCF_000383475.1 PRJNA224116 SAMN02440517 ARTJ00000000.1 na 1169146 1169146 Microbacterium sp. 11MF strain=11MF na latest Scaffold Major Full 2013-04-26 ASM38347v1 DOE Joint Genome Institute GCA_000383475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/475/GCF_000383475.1_ASM38347v1/ na na na haploid bacteria 2912910 2911935 70.000000 0 3 4 NCBI RefSeq GCF_000383475.1-RS_2025_08_25 2025-08-25 2851 2791 54 na GCF_000383495.1 PRJNA224116 SAMN02440518 ARTK00000000.1 na 1172186 1172186 Mycobacterium sp. 360MFTsu5.1 strain=360MFTsu5.1 na latest Scaffold Major Full 2013-04-26 ASM38349v1 DOE Joint Genome Institute GCA_000383495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/495/GCF_000383495.1_ASM38349v1/ na na na haploid bacteria 6057078 6055788 67.000000 0 23 26 NCBI RefSeq GCF_000383495.1-RS_2024_07_01 2024-07-01 5858 5728 69 na GCF_000383515.1 PRJNA224116 SAMN02441640 ARTL00000000.1 na 634996 2100 Mesomycoplasma hyorhinis ATCC 17981 strain=BTS7 na latest Scaffold Major Full 2013-04-26 ASM38351v1 DOE Joint Genome Institute GCA_000383515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/515/GCF_000383515.1_ASM38351v1/ na assembly from type material na haploid bacteria 806507 804242 26.000000 0 24 26 NCBI RefSeq GCF_000383515.1-RS_2026_02_26 2026-02-26 750 690 36 na GCF_000383535.1 PRJNA224116 SAMN02440967 ARTM00000000.1 na 1172185 1172185 Nocardia sp. 348MFTsu5.1 strain=348MFTsu5.1 na latest Scaffold Major Full 2013-04-26 ASM38353v1 DOE Joint Genome Institute GCA_000383535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/535/GCF_000383535.1_ASM38353v1/ na na na haploid bacteria 5711547 5711234 64.000000 0 35 37 NCBI RefSeq GCF_000383535.1-RS_2024_08_13 2024-08-13 5332 5204 59 na GCF_000383555.1 PRJNA224116 SAMN02441641 ARTN00000000.1 na 1172184 1172184 Rhodococcus sp. 114MFTsu3.1 strain=114MFTsu3.1 na latest Scaffold Major Full 2013-04-26 ASM38355v1 DOE Joint Genome Institute GCA_000383555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/555/GCF_000383555.1_ASM38355v1/ na na na haploid bacteria 5552643 5552313 64.500000 0 35 38 NCBI RefSeq GCF_000383555.1-RS_2025_08_25 2025-08-25 5223 5126 61 na GCF_000383575.1 PRJNA224116 SAMN02261318 ARTO00000000.1 reference genome 1050199 1050199 Salinispora oceanensis strain=DSM 45547 na latest Scaffold Major Full 2013-04-26 ASM38357v1 JGI GCA_000383575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/575/GCF_000383575.1_ASM38357v1/ na assembly from type material na haploid bacteria 5447211 5445911 70.000000 0 2 15 NCBI RefSeq GCF_000383575.1-RS_2025_11_22 2025-11-22 4955 4752 59 na GCF_000383595.1 PRJNA224116 SAMN02261243 ARTP00000000.1 reference genome 1054862 42235 Streptomyces bottropensis ATCC 25435 strain=ATCC 25435 na latest Scaffold Major Full 2013-04-26 ASM38359v1 JGI GCA_000383595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/595/GCF_000383595.1_ASM38359v1/ na assembly from type material na haploid bacteria 8955726 8955426 71.000000 0 1 4 NCBI RefSeq GCF_000383595.1-RS_2026_04_29 2026-04-29 7907 7570 89 na GCF_000383615.1 PRJNA224116 SAMN02440519 ARTQ00000000.1 na 1172183 58343 Streptomyces canus 299MFChir4.1 strain=299MFChir4.1 na latest Scaffold Major Full 2013-04-26 ASM38361v1 DOE Joint Genome Institute GCA_000383615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/615/GCF_000383615.1_ASM38361v1/ na na na haploid bacteria 10479972 10473188 70.500000 0 116 148 NCBI RefSeq GCF_000383615.1-RS_2026_03_06 2026-03-06 9773 9212 83 na GCF_000383635.1 PRJNA224116 SAMN02441630 ARTR00000000.1 na 1172181 1172181 Streptomyces sp. 303MFCol5.2 strain=303MFCol5.2 na latest Scaffold Major Full 2013-04-26 ASM38363v1 DOE Joint Genome Institute GCA_000383635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/635/GCF_000383635.1_ASM38363v1/ na na na haploid bacteria 9550898 9550563 71.500000 0 77 80 NCBI RefSeq GCF_000383635.1-RS_2025_03_25 2025-03-25 8464 8210 87 na GCF_000383655.1 PRJNA224116 SAMN02441631 ARTS00000000.1 na 1172180 1172180 Streptomyces sp. 351MFTsu5.1 strain=351MFTsu5.1 na latest Scaffold Major Full 2013-04-26 ASM38365v1 DOE Joint Genome Institute GCA_000383655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/655/GCF_000383655.1_ASM38365v1/ na na na haploid bacteria 9330122 9329502 71.000000 0 45 49 NCBI RefSeq GCF_000383655.1-RS_2025_03_25 2025-03-25 8477 8250 83 na GCF_000383675.1 PRJNA224116 SAMN02440959 ARTT00000000.1 na 1172188 1172188 Terracoccus sp. 273MFTsu3.1 strain=273MFTsu3.1 na latest Scaffold Major Full 2013-04-26 ASM38367v1 DOE Joint Genome Institute GCA_000383675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/675/GCF_000383675.1_ASM38367v1/ na na na haploid bacteria 4938734 4938634 71.500000 0 18 19 NCBI RefSeq GCF_000383675.1-RS_2024_08_13 2024-08-13 4629 4549 60 na GCF_000383695.1 PRJNA224116 SAMN02441632 ARTU00000000.1 na 748652 748652 Thioalkalivibrio sp. ALJ15 strain=ALJ15 na latest Scaffold Major Full 2013-04-26 ASM38369v1 DOE Joint Genome Institute GCA_000383695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/695/GCF_000383695.1_ASM38369v1/ na na na haploid bacteria 2852324 2849214 66.000000 0 13 16 NCBI RefSeq GCF_000383695.1-RS_2024_08_13 2024-08-13 2715 2633 56 na GCF_000383775.1 PRJNA224116 SAMN02256397 AICX00000000.1 reference genome 928729 129922 Saccharomonospora halophila 8 strain=8 na latest Scaffold Major Full 2013-04-26 ASM38377v1 Joint Genome Institute GCA_000383775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/775/GCF_000383775.1_ASM38377v1/ na assembly from type material na haploid bacteria 3685023 3632223 71.000000 0 116 644 NCBI RefSeq GCF_000383775.1-RS_2025_12_13 2025-12-13 3870 3526 56 na GCF_000383795.1 PRJNA224116 SAMN02261268 AICY00000000.1 reference genome 882085 369829 Saccharomonospora saliphila YIM 90502 strain=YIM 90502 na latest Scaffold Major Full 2013-04-26 ASM38379v1 JGI GCA_000383795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/795/GCF_000383795.1_ASM38379v1/ na assembly from type material na haploid bacteria 4030889 3977489 71.000000 0 145 679 NCBI RefSeq GCF_000383795.1-RS_2025_12_13 2025-12-13 4092 3751 56 na GCF_000383855.1 PRJNA224116 SAMN02261244 ARVS00000000.1 reference genome 674036 34058 Methylobacter marinus A45 strain=A45 na latest Scaffold Major Full 2013-04-26 ASM38385v1 JGI GCA_000383855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/855/GCF_000383855.1_ASM38385v1/ na assembly from type material na haploid bacteria 4988792 4987882 52.500000 0 2 12 NCBI RefSeq GCF_000383855.1-RS_2025_12_13 2025-12-13 4527 4430 64 26798114 GCF_000383875.1 PRJNA224116 SAMN02256402 ARVR00000000.1 reference genome 1121917 301148 Caldibacillus debilis DSM 16016 strain=DSM 16016 na latest Scaffold Major Full 2013-04-26 ASM38387v1 DOE Joint Genome Institute GCA_000383875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/875/GCF_000383875.1_ASM38387v1/ na assembly from type material na haploid bacteria 3059517 3057066 51.500000 0 40 42 NCBI RefSeq GCF_000383875.1-RS_2025_12_09 2025-12-09 2794 2650 73 na GCF_000383915.1 PRJNA224116 SAMN02261299 ARPK00000000.1 reference genome 1089544 346045 Amycolatopsis benzoatilytica AK 16/65 strain=AK 16/65 na latest Scaffold Major Full 2013-04-26 ASM38391v1 JGI GCA_000383915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/915/GCF_000383915.1_ASM38391v1/ na assembly from type material na haploid bacteria 8704271 8703861 70.000000 0 1 6 NCBI RefSeq GCF_000383915.1-RS_2026_05_02 2026-05-02 8089 7940 78 na GCF_000383935.1 PRJNA224116 SAMN02441313 ARPE00000000.1 na 1157634 1157634 Streptomyces sp. Amel2xE9 strain=Amel2xE9 na latest Scaffold Major Full 2013-04-26 ASM38393v1 DOE Joint Genome Institute GCA_000383935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/935/GCF_000383935.1_ASM38393v1/ na na na haploid bacteria 8252435 8251615 73.000000 0 70 73 NCBI RefSeq GCF_000383935.1-RS_2025_03_25 2025-03-25 7247 6995 84 na GCF_000383955.1 PRJNA224116 SAMN02261300 ARPG00000000.1 reference genome 1089547 451374 Rudanella lutea DSM 19387 strain=DSM 19387 na latest Scaffold Major Full 2013-04-26 ASM38395v1 JGI GCA_000383955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/955/GCF_000383955.1_ASM38395v1/ na assembly from type material na haploid bacteria 6546036 6544636 54.500000 0 4 18 NCBI RefSeq GCF_000383955.1-RS_2026_05_02 2026-05-02 5259 5173 50 na GCF_000383975.1 PRJNA224116 SAMN02261315 ARPH00000000.1 reference genome 1114856 63128 Natronorubrum tibetense GA33 strain=GA33 na latest Scaffold Major Full 2013-04-26 ASM38397v1 JGI GCA_000383975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/975/GCF_000383975.1_ASM38397v1/ na assembly from type material na haploid archaea 4934841 4934341 62.500000 0 5 10 NCBI RefSeq GCF_000383975.1-RS_2025_11_20 2025-11-20 4761 4596 59 na GCF_000384015.1 PRJNA224116 SAMN02261278 AQZF00000000.1 na 146907 146907 Desulfitobacterium sp. PCE1 strain=PCE1 na latest Scaffold Major Full 2013-04-26 ASM38401v1 JGI GCA_000384015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/015/GCF_000384015.1_ASM38401v1/ na na na haploid bacteria 4220584 4218184 45.000000 0 1 25 NCBI RefSeq GCF_000384015.1-RS_2024_08_22 2024-08-22 4079 3977 52 29040502 GCF_000384035.1 PRJNA224116 SAMN02261292 AQZN00000000.1 reference genome 1050202 33906 Actinopolyspora mortivallis DSM 44261 strain=HS-1 na latest Scaffold Major Full 2013-04-26 ASM38403v1 JGI GCA_000384035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/035/GCF_000384035.1_ASM38403v1/ na assembly from type material na haploid bacteria 4233350 4231650 69.000000 0 1 18 NCBI RefSeq GCF_000384035.1-RS_2026_05_02 2026-05-02 3951 3828 68 na GCF_000384075.1 PRJNA224116 SAMN02261317 AQZU00000000.1 reference genome 1078846 645578 Methylovulum miyakonense HT12 strain=HT12 na latest Scaffold Major Full 2013-04-26 ASM38407v1 JGI GCA_000384075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/075/GCF_000384075.1_ASM38407v1/ na assembly from type material na haploid bacteria 4687143 4686343 50.500000 0 1 9 NCBI RefSeq GCF_000384075.1-RS_2025_12_13 2025-12-13 4272 4146 59 na GCF_000384115.1 PRJNA224116 SAMN02261321 AQZX00000000.1 reference genome 1048339 35751 Sporichthya polymorpha DSM 43042 strain=DSM 43042 na latest Scaffold Major Full 2013-04-26 ASM38411v1 JGI GCA_000384115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/115/GCF_000384115.1_ASM38411v1/ na assembly from type material na haploid bacteria 5500153 5497153 71.500000 0 1 31 NCBI RefSeq GCF_000384115.1-RS_2026_05_02 2026-05-02 5281 5168 51 na GCF_000384135.1 PRJNA224116 SAMN02261323 AQZZ00000000.1 reference genome 1069080 78120 Succinispira mobilis DSM 6222 strain=DSM 6222 na latest Scaffold Major Full 2013-04-26 ASM38413v1 JGI GCA_000384135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/135/GCF_000384135.1_ASM38413v1/ na assembly from type material na haploid bacteria 2085243 2085043 36.000000 0 1 3 NCBI RefSeq GCF_000384135.1-RS_2026_05_02 2026-05-02 1987 1901 66 na GCF_000384155.1 PRJNA224116 SAMN02261247 ARAC00000000.1 na 1115834 1115834 Methylophilus sp. 42 strain=42 na latest Scaffold Major Full 2013-04-26 ASM38415v1 JGI GCA_000384155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/155/GCF_000384155.1_ASM38415v1/ na na na haploid bacteria 2968340 2968240 50.500000 0 1 2 NCBI RefSeq GCF_000384155.1-RS_2024_08_13 2024-08-13 2807 2757 47 na GCF_000384175.1 PRJNA224116 SAMN02261248 ARAD00000000.1 reference genome 1054860 1951 Streptomyces purpureus KA281 strain=KA281 na latest Scaffold Major Full 2013-04-26 ASM38417v1 JGI GCA_000384175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/175/GCF_000384175.1_ASM38417v1/ na assembly from heterotypic synonym type material na haploid bacteria 7458334 7456034 71.500000 0 1 24 NCBI RefSeq GCF_000384175.1-RS_2026_04_26 2026-04-26 6881 6616 90 na GCF_000384195.1 PRJNA224116 SAMN02261259 ARAE00000000.1 reference genome 1050201 174709 Allobaculum stercoricanis DSM 13633 strain=DSM 13633 na latest Scaffold Major Full 2013-04-26 ASM38419v1 JGI GCA_000384195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/195/GCF_000384195.1_ASM38419v1/ na assembly from type material na haploid bacteria 2052877 2052677 38.000000 0 1 3 NCBI RefSeq GCF_000384195.1-RS_2026_05_02 2026-05-02 1809 1715 80 na GCF_000384215.1 PRJNA224116 SAMN02261260 ARAF00000000.1 reference genome 1125972 76020 Amycolatopsis alba DSM 44262 strain=DSM 44262 na latest Scaffold Major Full 2013-04-26 ASM38421v1 JGI GCA_000384215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/215/GCF_000384215.1_ASM38421v1/ na assembly from type material na haploid bacteria 9811274 9811174 68.500000 0 1 2 NCBI RefSeq GCF_000384215.1-RS_2026_04_29 2026-04-29 9003 8858 66 na GCF_000384235.1 PRJNA224116 SAMN02256398 ARAR00000000.1 reference genome 1123516 373391 Hydrogenovibrio halophilus DSM 15072 strain=DSM 15072 na latest Scaffold Major Full 2013-04-26 ASM38423v1 DOE Joint Genome Institute GCA_000384235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/235/GCF_000384235.1_ASM38423v1/ na assembly from type material na haploid bacteria 2356686 2356486 55.000000 0 1 3 NCBI RefSeq GCF_000384235.1-RS_2025_12_09 2025-12-09 2228 2166 57 na GCF_000384255.1 PRJNA224116 SAMN02256405 ARBA00000000.1 na 1132855 359408 Methylotenera mobilis 13 strain=13 na latest Scaffold Major Full 2013-04-26 ASM38425v1 DOE Joint Genome Institute GCA_000384255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/255/GCF_000384255.1_ASM38425v1/ na na na haploid bacteria 2803787 2803587 42.500000 0 1 3 NCBI RefSeq GCF_000384255.1-RS_2025_04_15 2025-04-15 2681 2605 61 na GCF_000384275.1 PRJNA224116 SAMN02256404 ARBB00000000.1 na 999546 168697 Salinispora arenicola DSM 45545 strain=CNS-991 na latest Scaffold Major Full 2013-04-26 ASM38427v1 DOE Joint Genome Institute GCA_000384275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/275/GCF_000384275.1_ASM38427v1/ na na na haploid bacteria 5867409 5867009 69.500000 0 1 5 NCBI RefSeq GCF_000384275.1-RS_2026_01_30 2026-01-30 5254 5039 68 na GCF_000384295.1 PRJNA224116 SAMN02256403 ARBH00000000.1 reference genome 1089545 208443 Amycolatopsis balhimycina FH 1894 strain=DSM 44591 na latest Scaffold Major Full 2013-04-26 ASM38429v1 DOE Joint Genome Institute GCA_000384295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/295/GCF_000384295.1_ASM38429v1/ na assembly from type material na haploid bacteria 10858503 10857603 71.000000 0 1 10 NCBI RefSeq GCF_000384295.1-RS_2026_05_02 2026-05-02 9924 9709 70 na GCF_000384315.1 PRJNA224116 SAMN02261308 ARVW00000000.1 reference genome 1068980 381445 Amycolatopsis nigrescens CSC17Ta-90 strain=CSC17Ta-90 na latest Contig Major Full 2013-04-26 ASM38431v1 JGI GCA_000384315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/315/GCF_000384315.1_ASM38431v1/ na assembly from type material na haploid bacteria 9111009 9111009 70.000000 0 1 1 NCBI RefSeq GCF_000384315.1-RS_2026_05_02 2026-05-02 8646 8535 60 na GCF_000384335.2 PRJNA224116 SAMN02194552 ARWG00000000.2 na 1163419 1163419 Hyphomicrobium sp. 99 strain=99 na latest Scaffold Major Full 2015-03-30 ASM38433v2 DOE Joint Genome Institute GCA_000384335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/335/GCF_000384335.2_ASM38433v2/ na na na haploid bacteria 4108307 4108242 59.500000 0 3 4 NCBI RefSeq GCF_000384335.2-RS_2024_08_22 2024-08-22 3900 3806 54 na GCF_000384355.1 PRJNA224116 SAMN02256394 ARWC00000000.1 na 1131551 1131551 Methylotenera sp. 1P/1 strain=1P/1 na latest Contig Major Full 2013-04-26 ASM38435v1 DOE Joint Genome Institute GCA_000384355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/355/GCF_000384355.1_ASM38435v1/ na na na haploid bacteria 2747525 2747525 45.500000 0 1 1 NCBI RefSeq GCF_000384355.1-RS_2024_08_13 2024-08-13 2640 2580 50 na GCF_000384375.1 PRJNA224116 SAMN02261245 ARVX00000000.1 na 1115835 1055487 Methylotenera versatilis 79 strain=79 na latest Contig Major Full 2013-04-26 ASM38437v1 JGI GCA_000384375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/375/GCF_000384375.1_ASM38437v1/ na na na haploid bacteria 2604277 2604277 42.000000 0 1 1 NCBI RefSeq GCF_000384375.1-RS_2025_08_25 2025-08-25 2446 2396 47 na GCF_000384395.1 PRJNA224116 SAMN02441294 ARWE00000000.1 reference genome 1121918 225196 Geopsychrobacter electrodiphilus DSM 16401 strain=DSM 16401 na latest Contig Major Full 2013-04-26 ASM38439v1 DOE Joint Genome Institute GCA_000384395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/395/GCF_000384395.1_ASM38439v1/ na assembly from type material na haploid bacteria 4241730 4241730 53.000000 0 1 1 NCBI RefSeq GCF_000384395.1-RS_2026_05_02 2026-05-02 3909 3810 55 na GCF_000384415.1 PRJNA224116 SAMN02261262 ARVU00000000.1 reference genome 655438 34068 Cycloclasticus pugetii PS-1 strain=PS-1 na latest Contig Major Full 2013-04-26 ASM38441v1 JGI GCA_000384415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/415/GCF_000384415.1_ASM38441v1/ na assembly from type material na haploid bacteria 2383924 2383924 42.000000 0 1 1 NCBI RefSeq GCF_000384415.1-RS_2025_12_13 2025-12-13 2309 2262 42 na GCF_000384435.1 PRJNA224116 SAMN02441295 ARWF00000000.1 na 1165096 1165096 Methylotenera sp. 73s strain=73s na latest Contig Major Full 2013-04-26 ASM38443v1 DOE Joint Genome Institute GCA_000384435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/435/GCF_000384435.1_ASM38443v1/ na na na haploid bacteria 2608589 2608589 42.000000 0 1 1 NCBI RefSeq GCF_000384435.1-RS_2024_08_13 2024-08-13 2447 2392 49 na GCF_000384455.1 PRJNA224116 SAMN02256395 ARVY00000000.1 na 1118158 198252 Candidatus Pelagibacter ubique HTCC1040 strain=HTCC1040 na latest Contig Major Full 2013-04-26 ASM38445v1 DOE Joint Genome Institute GCA_000384455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/455/GCF_000384455.1_ASM38445v1/ na na na haploid bacteria 1274624 1274624 29.500000 0 1 1 NCBI RefSeq GCF_000384455.1-RS_2026_06_09 2026-06-09 1369 1329 36 na GCF_000384475.1 PRJNA224116 SAMN02256399 ARWB00000000.1 na 1101190 1101190 Methylopila sp. M107 strain=M107 na latest Contig Major Full 2013-04-26 ASM38447v1 DOE Joint Genome Institute GCA_000384475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/475/GCF_000384475.1_ASM38447v1/ na na na haploid bacteria 4453493 4453493 68.000000 0 1 1 NCBI RefSeq GCF_000384475.1-RS_2024_05_19 2024-05-19 4226 4149 56 na GCF_000384555.1 PRJNA224116 SAMN02440504 ARQL00000000.1 na 1167635 1167635 Agrobacterium sp. 224MFTsu3.1 strain=224MFTsu3.1 na latest Contig Major Full 2013-04-26 ASM38455v1 DOE Joint Genome Institute GCA_000384555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/555/GCF_000384555.1_ASM38455v1/ na na na haploid bacteria 4799379 4799379 59.500000 0 21 21 NCBI RefSeq GCF_000384555.1-RS_2024_06_03 2024-06-03 4521 4444 51 na GCF_000384655.1 PRJNA224116 SAMN02440503 ARQI00000000.1 reference genome 1267004 13264 Brachyspira innocens ATCC 29796 strain=B256 na latest Contig Major Full 2013-04-26 ASM38465v1 DOE Joint Genome Institute GCA_000384655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/655/GCF_000384655.1_ASM38465v1/ na assembly from type material na haploid bacteria 3281611 3281611 27.500000 0 130 130 NCBI RefSeq GCF_000384655.1-RS_2026_05_02 2026-05-02 2980 2858 41 na GCF_000384815.1 PRJNA224116 SAMN02441308 ARQF00000000.1 na 1121444 126333 Halodesulfovibrio aestuarii DSM 17919 = ATCC 29578 strain=ATCC 29578 na latest Contig Major Full 2013-04-26 ASM38481v1 DOE Joint Genome Institute GCA_000384815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/815/GCF_000384815.1_ASM38481v1/ na assembly from type material na haploid bacteria 3545807 3545807 45.000000 0 21 21 NCBI RefSeq GCF_000384815.1-RS_2026_05_16 2026-05-16 3232 3099 107 na GCF_000384965.1 PRJNA224116 SAMN02472039 AGWA00000000.1 reference genome 1094491 155194 Bartonella bovis 91-4 strain=91-4 na latest Chromosome Major Full 2013-04-30 BBbMcIrM01 Uppsala University GCA_000384965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/384/965/GCF_000384965.1_BBbMcIrM01/ na assembly from type material na haploid bacteria 1624667 1622867 37.500000 1 1 19 NCBI RefSeq GCF_000384965.1-RS_2026_03_30 2026-03-30 1433 1333 53 23555299 GCF_000385075.1 PRJNA224116 SAMN02440501 ARQG00000000.1 na 1267000 2098 Metamycoplasma hominis ATCC 27545 strain=LBD-4 na latest Contig Major Full 2013-04-26 ASM38507v1 DOE Joint Genome Institute GCA_000385075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/075/GCF_000385075.1_ASM38507v1/ na na na haploid bacteria 684158 684158 27.000000 0 22 22 NCBI RefSeq GCF_000385075.1-RS_2026_01_30 2026-01-30 626 575 45 na GCF_000385095.1 PRJNA224116 SAMN02440502 ARQH00000000.1 na 1267001 2109 Mycoplasmopsis synoviae ATCC 25204 strain=WVU 1853 na latest Contig Major Full 2013-04-26 ASM38509v1 DOE Joint Genome Institute GCA_000385095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/095/GCF_000385095.1_ASM38509v1/ na assembly from type material na haploid bacteria 736709 736709 28.000000 0 42 42 NCBI RefSeq GCF_000385095.1-RS_2026_02_27 2026-02-27 703 633 46 na GCF_000385135.1 PRJNA224116 SAMN02440969 ARQM00000000.1 na 1172178 88382 Promicromonospora sukumoe 327MFSha3.1 strain=327MFSha3.1 na latest Contig Major Full 2013-04-26 ASM38513v1 DOE Joint Genome Institute GCA_000385135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/135/GCF_000385135.1_ASM38513v1/ na na na haploid bacteria 6253582 6253582 73.000000 0 18 18 NCBI RefSeq GCF_000385135.1-RS_2025_08_25 2025-08-25 5568 5493 60 na GCF_000385155.1 PRJNA224116 SAMN02261297 ARRT00000000.1 na 936136 384 Rhizobium leguminosarum bv. viciae 248 strain=248 na latest Contig Major Full 2013-04-26 ASM38515v1 JGI GCA_000385155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/155/GCF_000385155.1_ASM38515v1/ na na na haploid bacteria 7288508 7288508 61.000000 0 7 7 NCBI RefSeq GCF_000385155.1-RS_2025_06_11 2025-06-11 7102 6849 63 na GCF_000385175.1 PRJNA224116 SAMN02441646 ARQJ00000000.1 reference genome 1123230 418756 Salinicoccus albus DSM 19776 strain=YIM-Y21 na latest Contig Major Full 2013-04-26 ASM38517v1 DOE Joint Genome Institute GCA_000385175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/175/GCF_000385175.1_ASM38517v1/ na assembly from type material na haploid bacteria 2639352 2639352 44.000000 0 33 33 NCBI RefSeq GCF_000385175.1-RS_2026_05_02 2026-05-02 2751 2646 69 na GCF_000385215.1 PRJNA224116 SAMN02441309 ARQK00000000.1 reference genome 1279019 152475 Thioalkalivibrio thiocyanoxidans ARh2 strain=ARh2 na latest Contig Major Full 2013-04-26 ASM38521v1 DOE Joint Genome Institute GCA_000385215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/215/GCF_000385215.1_ASM38521v1/ na assembly from type material na haploid bacteria 2765337 2765337 66.000000 0 61 61 NCBI RefSeq GCF_000385215.1-RS_2026_04_23 2026-04-23 2663 2577 54 na GCF_000385335.1 PRJNA224116 SAMN02256400 ARWA00000000.1 reference genome 876269 876270 Methyloferula stellata AR4 strain=AR4T na latest Contig Major Full 2013-04-26 ASM38533v1 DOE Joint Genome Institute GCA_000385335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/335/GCF_000385335.1_ASM38533v1/ na assembly from type material na haploid bacteria 4235448 4235448 59.500000 0 1 1 NCBI RefSeq GCF_000385335.1-RS_2026_04_23 2026-04-23 3952 3873 53 25745010 GCF_000385355.1 PRJNA224116 SAMN02256401 ARVZ00000000.1 na 1034768 84595 Gordonia polyisoprenivorans HW436 strain=HW436 na latest Contig Major Full 2013-04-26 ASM38535v1 DOE Joint Genome Institute GCA_000385355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/355/GCF_000385355.1_ASM38535v1/ na na na haploid bacteria 6328722 6328722 67.000000 0 1 1 NCBI RefSeq GCF_000385355.1-RS_2026_02_08 2026-02-08 5697 5530 61 na GCF_000385395.1 PRJNA224116 SAMN02472034 AGWB00000000.1 na 1094492 155194 Bartonella bovis m02 strain=m02 na latest Scaffold Major Full 2013-05-20 m02McIrM01 Uppsala University GCA_000385395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/395/GCF_000385395.1_m02McIrM01/ na na na haploid bacteria 1623938 1620638 37.500000 0 3 36 NCBI RefSeq GCF_000385395.1-RS_2025_05_21 2025-05-21 1446 1340 52 23555299 GCF_000385415.1 PRJNA224116 SAMN02472036 AGWD00000000.1 na 1094502 33047 Bartonella vinsonii subsp. berkhoffii str. Tweed strain=Tweed na latest Scaffold Major Full 2013-05-20 BVtwMcIrM01 Uppsala University GCA_000385415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/415/GCF_000385415.1_BVtwMcIrM01/ na na na haploid bacteria 2024128 2022328 39.500000 0 9 27 NCBI RefSeq GCF_000385415.1-RS_2026_03_31 2026-03-31 1936 1706 55 23555299 GCF_000385435.1 PRJNA224116 SAMN02472035 AGWC00000000.1 na 1094496 165694 Bartonella schoenbuchensis m07a strain=m07a na latest Scaffold Major Full 2013-05-01 m07aNrPeIrM01 Uppsala University GCA_000385435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/435/GCF_000385435.1_m07aNrPeIrM01/ na na na haploid bacteria 1680471 1679871 37.500000 3 5 11 NCBI RefSeq GCF_000385435.1-RS_2026_03_31 2026-03-31 1536 1445 53 23555299 GCF_000385495.1 PRJNA224116 SAMN01983878 APMO00000000.1 na 1290430 782 Rickettsia prowazekii str. Cairo 3 strain=Cairo 3 na latest Contig Major Full 2013-04-29 P_2008_03_27_11_29_25_runAssembly Naval Medical Research Center GCA_000385495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/495/GCF_000385495.1_P_2008_03_27_11_29_25_runAssembly/ na na na haploid bacteria 1113970 1113970 29.000000 0 20 20 NCBI RefSeq GCF_000385495.1-RS_2026_01_08 2026-01-08 894 824 40 23814035 GCF_000385565.1 PRJNA224116 SAMN02028569 na reference genome 387631 1316941 Archaeoglobus sulfaticallidus PM70-1 strain=PM70-1 na latest Complete Genome Major Full 2013-04-30 ASM38556v1 University of Bergen, Centre for Geobiology, Department of Biology GCA_000385565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/565/GCF_000385565.1_ASM38556v1/ na assembly from type material na haploid archaea 2076931 2076931 43.000000 1 1 1 NCBI RefSeq GCF_000385565.1-RS_2025_11_21 2025-11-21 2334 2248 56 23833130 GCF_000385905.1 PRJNA224116 SAMN02603210 na na 527001 28901 Salmonella enterica subsp. enterica serovar Typhi str. Ty21a strain=Ty21a na latest Complete Genome Major Full 2013-05-01 ASM38590v1 Division of Bacterial, Parasitic and Allergenic Products, LESTD, FDA-CBER, USA GCA_000385905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/905/GCF_000385905.1_ASM38590v1/ na na na haploid bacteria 4791958 4791958 52.000000 1 1 1 NCBI RefSeq GCF_000385905.1-RS_2025_02_14 2025-02-14 4713 4265 111 23969054 GCF_000385925.1 PRJNA224116 SAMN02603400 na na 1302863 45634 Streptococcus cristatus AS 1.3089 strain=AS 1.3089 na latest Complete Genome Major Full 2013-05-01 ASM38592v1 Institute of Microbiology, Chinese Academy of Sciences GCA_000385925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/925/GCF_000385925.1_ASM38592v1/ na assembly from heterotypic synonym type material na haploid bacteria 2142100 2142100 42.000000 1 1 1 NCBI RefSeq GCF_000385925.1-RS_2026_03_15 2026-03-15 2161 1996 65 23788543 GCF_000385945.1 PRJNA224116 SAMN02603305 na na 1303692 1919 Streptomyces microflavus DSM 40593 strain=DSM 40593 na latest Complete Genome Major Full 2013-05-01 ASM38594v1 Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Centre for Infection Research GCA_000385945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/945/GCF_000385945.1_ASM38594v1/ na assembly from heterotypic synonym type material na haploid bacteria 7905758 7905758 71.500000 1 1 1 NCBI RefSeq GCF_000385945.1-RS_2026_02_02 2026-02-02 7057 6855 93 na GCF_000385965.2 PRJNA224116 SAMN02471930 na na 1239783 1452 Bacillus atrophaeus UCMB-5137 strain=UCMB-5137 na latest Chromosome Major Full 2015-06-11 ASM38596v2 University of Pretoria GCA_000385965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/965/GCF_000385965.2_ASM38596v2/ na na na haploid bacteria 4064321 4063673 43.500000 1 1 7 NCBI RefSeq GCF_000385965.2-RS_2025_12_24 2025-12-24 4108 3861 86 23788535 GCF_000385985.1 PRJNA224116 SAMN02009237 AQGR00000000.1 na 1315975 1423 Bacillus subtilis PS216 strain=PS216 na latest Contig Major Full 2013-05-01 Bacillus subtilis PS216 American Museum of Natural History GCA_000385985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/385/985/GCF_000385985.1_Bacillus_subtilis_PS216/ na na na haploid bacteria 4307186 4307186 44.000000 0 146 146 NCBI RefSeq GCF_000385985.1-RS_2025_06_04 2025-06-04 4671 4300 152 23788536 GCF_000386025.2 PRJNA224116 SAMN01780134 APUR00000000.1 na 1145183 487 Neisseria meningitidis NM115 strain=NM115 na latest Contig Major Full 2013-05-01 ASM38602v2 IGS GCA_000386025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/025/GCF_000386025.2_ASM38602v2/ na na na haploid bacteria 2167044 2167044 52.000000 0 144 144 NCBI RefSeq GCF_000386025.2-RS_2025_05_19 2025-05-19 2211 1940 88 na GCF_000386045.2 PRJNA224116 SAMN01780135 APUS00000000.1 na 1145184 487 Neisseria meningitidis NM90 strain=NM90 na latest Contig Major Full 2013-05-01 ASM38604v2 IGS GCA_000386045.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/045/GCF_000386045.2_ASM38604v2/ na na na haploid bacteria 2255031 2255031 52.000000 0 144 144 NCBI RefSeq GCF_000386045.2-RS_2026_01_10 2026-01-10 2341 2031 85 na GCF_000386065.2 PRJNA224116 SAMN01780136 APUT00000000.1 na 1145185 487 Neisseria meningitidis NM3042 strain=NM3042 na latest Contig Major Full 2013-05-01 ASM38606v2 IGS GCA_000386065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/065/GCF_000386065.2_ASM38606v2/ na na na haploid bacteria 2177675 2177675 52.000000 0 146 146 NCBI RefSeq GCF_000386065.2-RS_2026_01_11 2026-01-11 2255 1978 81 na GCF_000386105.2 PRJNA224116 SAMN01780070 APSG00000000.1 na 1145120 487 Neisseria meningitidis 69176 strain=69176 na latest Contig Major Full 2013-05-01 ASM38610v2 IGS GCA_000386105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/105/GCF_000386105.2_ASM38610v2/ na na na haploid bacteria 2202529 2202529 52.000000 0 138 138 NCBI RefSeq GCF_000386105.2-RS_2026_01_07 2026-01-07 2277 2001 79 na GCF_000386125.2 PRJNA224116 SAMN01780071 APSH00000000.1 na 1145121 487 Neisseria meningitidis 70021 strain=70021 na latest Contig Major Full 2013-05-01 ASM38612v2 IGS GCA_000386125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/125/GCF_000386125.2_ASM38612v2/ na na na haploid bacteria 2211856 2211856 52.000000 0 138 138 NCBI RefSeq GCF_000386125.2-RS_2026_01_07 2026-01-07 2304 2016 89 na GCF_000386145.2 PRJNA224116 SAMN01780072 APSI00000000.1 na 1145122 487 Neisseria meningitidis 2000080 strain=2000080 na latest Contig Major Full 2013-05-01 ASM38614v2 IGS GCA_000386145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/145/GCF_000386145.2_ASM38614v2/ na na na haploid bacteria 2158353 2158353 52.000000 0 137 137 NCBI RefSeq GCF_000386145.2-RS_2026_01_02 2026-01-02 2238 1966 79 na GCF_000386165.2 PRJNA224116 SAMN01780073 APSJ00000000.1 na 1145123 487 Neisseria meningitidis 96060 strain=96060 na latest Contig Major Full 2013-05-01 ASM38616v2 IGS GCA_000386165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/165/GCF_000386165.2_ASM38616v2/ na na na haploid bacteria 2240241 2240241 52.000000 0 131 131 NCBI RefSeq GCF_000386165.2-RS_2026_02_23 2026-02-23 2357 2060 85 na GCF_000386185.2 PRJNA224116 SAMN01780074 APSK00000000.1 na 1145124 487 Neisseria meningitidis 94018 strain=94018 na latest Contig Major Full 2013-05-01 ASM38618v2 IGS GCA_000386185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/185/GCF_000386185.2_ASM38618v2/ na na na haploid bacteria 2145568 2145568 52.000000 0 122 122 NCBI RefSeq GCF_000386185.2-RS_2026_01_02 2026-01-02 2231 1954 91 na GCF_000386205.2 PRJNA224116 SAMN01780075 APSL00000000.1 na 1145125 487 Neisseria meningitidis 75643 strain=75643 na latest Contig Major Full 2013-05-01 ASM38620v2 IGS GCA_000386205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/205/GCF_000386205.2_ASM38620v2/ na na na haploid bacteria 2135927 2135927 52.000000 0 135 135 NCBI RefSeq GCF_000386205.2-RS_2026_01_02 2026-01-02 2209 1948 74 na GCF_000386225.2 PRJNA224116 SAMN01780076 APSM00000000.1 na 1145126 487 Neisseria meningitidis 75689 strain=75689 na latest Contig Major Full 2013-05-01 ASM38622v2 IGS GCA_000386225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/225/GCF_000386225.2_ASM38622v2/ na na na haploid bacteria 2194770 2194770 52.000000 0 132 132 NCBI RefSeq GCF_000386225.2-RS_2026_01_07 2026-01-07 2258 1975 79 na GCF_000386265.2 PRJNA224116 SAMN01780079 APSP00000000.1 na 1145129 487 Neisseria meningitidis 63023 strain=63023 na latest Contig Major Full 2013-05-01 ASM38626v2 IGS GCA_000386265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/265/GCF_000386265.2_ASM38626v2/ na na na haploid bacteria 2248579 2248579 52.000000 0 141 141 NCBI RefSeq GCF_000386265.2-RS_2025_08_25 2025-08-25 2342 2054 88 na GCF_000386285.2 PRJNA224116 SAMN01780080 APSQ00000000.1 na 1145130 487 Neisseria meningitidis 61106 strain=61106 na latest Scaffold Major Full 2013-05-01 ASM38628v2 IGS GCA_000386285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/285/GCF_000386285.2_ASM38628v2/ na na na haploid bacteria 2243274 2243247 52.000000 0 147 149 NCBI RefSeq GCF_000386285.2-RS_2026_01_07 2026-01-07 2330 2046 78 na GCF_000386305.2 PRJNA224116 SAMN01780081 APSR00000000.1 na 1145131 487 Neisseria meningitidis 70082 strain=70082 na latest Contig Major Full 2013-05-01 ASM38630v2 IGS GCA_000386305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/305/GCF_000386305.2_ASM38630v2/ na na na haploid bacteria 2212150 2212150 52.000000 0 140 140 NCBI RefSeq GCF_000386305.2-RS_2026_01_07 2026-01-07 2314 2023 83 na GCF_000386325.2 PRJNA224116 SAMN01780082 APSS00000000.1 na 1145132 487 Neisseria meningitidis 65012 strain=65012 na latest Contig Major Full 2013-05-01 ASM38632v2 IGS GCA_000386325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/325/GCF_000386325.2_ASM38632v2/ na na na haploid bacteria 2175180 2175180 52.000000 0 144 144 NCBI RefSeq GCF_000386325.2-RS_2026_01_11 2026-01-11 2246 1984 83 na GCF_000386345.2 PRJNA224116 SAMN01780083 APST00000000.1 na 1145133 487 Neisseria meningitidis 64182 strain=64182 na latest Contig Major Full 2013-05-01 ASM38634v2 IGS GCA_000386345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/345/GCF_000386345.2_ASM38634v2/ na na na haploid bacteria 2190519 2190519 52.000000 0 135 135 NCBI RefSeq GCF_000386345.2-RS_2026_01_07 2026-01-07 2263 2000 83 na GCF_000386365.2 PRJNA224116 SAMN01780084 APSU00000000.1 na 1145134 487 Neisseria meningitidis 97027 strain=97027 na latest Contig Major Full 2013-05-01 ASM38636v2 IGS GCA_000386365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/365/GCF_000386365.2_ASM38636v2/ na na na haploid bacteria 2177665 2177665 52.000000 0 122 122 NCBI RefSeq GCF_000386365.2-RS_2026_01_02 2026-01-02 2243 1976 89 na GCF_000386385.2 PRJNA224116 SAMN01780085 APSV00000000.1 na 1145135 487 Neisseria meningitidis 96024 strain=96024 na latest Contig Major Full 2013-05-01 ASM38638v2 IGS GCA_000386385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/385/GCF_000386385.2_ASM38638v2/ na na na haploid bacteria 2142654 2142654 52.000000 0 144 144 NCBI RefSeq GCF_000386385.2-RS_2026_01_03 2026-01-03 2224 1934 82 na GCF_000386405.2 PRJNA224116 SAMN01780086 APSW00000000.1 na 1145136 487 Neisseria meningitidis 97008 strain=97008 na latest Contig Major Full 2013-05-01 ASM38640v2 IGS GCA_000386405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/405/GCF_000386405.2_ASM38640v2/ na na na haploid bacteria 2197490 2197490 52.000000 0 132 132 NCBI RefSeq GCF_000386405.2-RS_2026_01_07 2026-01-07 2280 2009 80 na GCF_000386425.2 PRJNA224116 SAMN01780087 APSX00000000.1 na 1145137 487 Neisseria meningitidis 98005 strain=98005 na latest Contig Major Full 2013-05-01 ASM38642v2 IGS GCA_000386425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/425/GCF_000386425.2_ASM38642v2/ na na na haploid bacteria 2147305 2147305 52.000000 0 140 140 NCBI RefSeq GCF_000386425.2-RS_2026_01_03 2026-01-03 2236 1958 79 na GCF_000386445.2 PRJNA224116 SAMN01780088 APSY00000000.1 na 1145138 487 Neisseria meningitidis 2004085 strain=2004085 na latest Contig Major Full 2013-05-01 ASM38644v2 IGS GCA_000386445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/445/GCF_000386445.2_ASM38644v2/ na na na haploid bacteria 2185547 2185547 52.000000 0 133 133 NCBI RefSeq GCF_000386445.2-RS_2026_01_02 2026-01-02 2246 1999 64 na GCF_000386465.2 PRJNA224116 SAMN01780090 APTA00000000.1 na 1145140 487 Neisseria meningitidis 2000063 strain=2000063 na latest Contig Major Full 2013-05-01 ASM38646v2 IGS GCA_000386465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/465/GCF_000386465.2_ASM38646v2/ na na na haploid bacteria 2198090 2198090 52.000000 0 140 140 NCBI RefSeq GCF_000386465.2-RS_2026_01_07 2026-01-07 2284 2032 74 na GCF_000386485.2 PRJNA224116 SAMN01780091 APTB00000000.1 na 1145141 487 Neisseria meningitidis 2002007 strain=2002007 na latest Contig Major Full 2013-05-01 ASM38648v2 IGS GCA_000386485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/485/GCF_000386485.2_ASM38648v2/ na na na haploid bacteria 2194113 2194113 52.000000 0 147 147 NCBI RefSeq GCF_000386485.2-RS_2026_01_07 2026-01-07 2273 1997 84 na GCF_000386525.2 PRJNA224116 SAMN01780093 APTD00000000.1 na 1145143 487 Neisseria meningitidis NM606 strain=NM606 na latest Contig Major Full 2013-05-01 ASM38652v2 IGS GCA_000386525.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/525/GCF_000386525.2_ASM38652v2/ na na na haploid bacteria 2157011 2157011 52.000000 0 135 135 NCBI RefSeq GCF_000386525.2-RS_2026_01_02 2026-01-02 2236 1965 86 na GCF_000386545.2 PRJNA224116 SAMN01780094 APTE00000000.1 na 1145144 487 Neisseria meningitidis NM607 strain=NM607 na latest Contig Major Full 2013-05-01 ASM38654v2 IGS GCA_000386545.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/545/GCF_000386545.2_ASM38654v2/ na na na haploid bacteria 2179282 2179282 52.000000 0 148 148 NCBI RefSeq GCF_000386545.2-RS_2026_01_02 2026-01-02 2252 1996 67 na GCF_000386565.2 PRJNA224116 SAMN01780095 APTF00000000.1 na 1145145 487 Neisseria meningitidis NM133 strain=NM133 na latest Contig Major Full 2013-05-01 ASM38656v2 IGS GCA_000386565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/565/GCF_000386565.2_ASM38656v2/ na na na haploid bacteria 2211619 2211619 52.000000 0 153 153 NCBI RefSeq GCF_000386565.2-RS_2026_01_07 2026-01-07 2315 2024 96 na GCF_000386585.2 PRJNA224116 SAMN01780137 APUU00000000.1 na 1145186 487 Neisseria meningitidis NM3222 strain=NM3222 na latest Contig Major Full 2013-05-01 ASM38658v2 IGS GCA_000386585.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/585/GCF_000386585.2_ASM38658v2/ na na na haploid bacteria 2185668 2185668 52.000000 0 150 150 NCBI RefSeq GCF_000386585.2-RS_2026_01_11 2026-01-11 2256 1965 74 na GCF_000386625.2 PRJNA224116 SAMN01780143 APUW00000000.1 na 1145188 487 Neisseria meningitidis NM3144 strain=NM3144 na latest Contig Major Full 2013-05-01 ASM38662v2 IGS GCA_000386625.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/625/GCF_000386625.2_ASM38662v2/ na na na haploid bacteria 2151495 2151495 52.000000 0 137 137 NCBI RefSeq GCF_000386625.2-RS_2026_01_03 2026-01-03 2225 1926 89 na GCF_000386645.2 PRJNA224116 SAMN01780145 APUX00000000.1 na 1145189 487 Neisseria meningitidis NM3158 strain=NM3158 na latest Contig Major Full 2013-05-01 ASM38664v2 IGS GCA_000386645.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/645/GCF_000386645.2_ASM38664v2/ na na na haploid bacteria 2127915 2127915 52.000000 0 146 146 NCBI RefSeq GCF_000386645.2-RS_2026_01_03 2026-01-03 2193 1907 69 na GCF_000386665.2 PRJNA224116 SAMN01780146 APUY00000000.1 na 1145190 487 Neisseria meningitidis NM3164 strain=NM3164 na latest Contig Major Full 2013-05-01 ASM38666v2 IGS GCA_000386665.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/665/GCF_000386665.2_ASM38666v2/ na na na haploid bacteria 2235582 2235582 52.000000 0 145 145 NCBI RefSeq GCF_000386665.2-RS_2026_01_12 2026-01-12 2303 1992 78 na GCF_000386685.2 PRJNA224116 SAMN01780168 APVA00000000.1 na 1145192 487 Neisseria meningitidis NM51 strain=NM51 na latest Contig Major Full 2013-05-01 ASM38668v2 IGS GCA_000386685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/685/GCF_000386685.2_ASM38668v2/ na na na haploid bacteria 2113282 2113282 52.000000 0 134 134 NCBI RefSeq GCF_000386685.2-RS_2026_01_02 2026-01-02 2169 1916 76 na GCF_000386705.2 PRJNA224116 SAMN01780100 APTK00000000.1 na 1145150 487 Neisseria meningitidis NM43 strain=NM43 na latest Contig Major Full 2013-05-01 ASM38670v2 IGS GCA_000386705.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/705/GCF_000386705.2_ASM38670v2/ na na na haploid bacteria 2123666 2123666 52.000000 0 132 132 NCBI RefSeq GCF_000386705.2-RS_2026_01_11 2026-01-11 2202 1939 80 na GCF_000386725.2 PRJNA224116 SAMN01780106 APTQ00000000.1 na 1145156 487 Neisseria meningitidis NM1495 strain=NM1495 na latest Contig Major Full 2013-05-01 ASM38672v2 IGS GCA_000386725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/725/GCF_000386725.2_ASM38672v2/ na na na haploid bacteria 2134432 2134432 52.000000 0 136 136 NCBI RefSeq GCF_000386725.2-RS_2026_01_02 2026-01-02 2205 1938 83 na GCF_000386765.2 PRJNA224116 SAMN01780108 APTS00000000.1 na 1145158 487 Neisseria meningitidis 73704 strain=73704 na latest Contig Major Full 2013-05-01 ASM38676v2 IGS GCA_000386765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/765/GCF_000386765.2_ASM38676v2/ na na na haploid bacteria 2107147 2107147 52.000000 0 123 123 NCBI RefSeq GCF_000386765.2-RS_2026_01_11 2026-01-11 2173 1920 76 na GCF_000386785.2 PRJNA224116 SAMN01780109 APTT00000000.1 na 1145159 487 Neisseria meningitidis 81858 strain=81858 na latest Contig Major Full 2013-05-01 ASM38678v2 IGS GCA_000386785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/785/GCF_000386785.2_ASM38678v2/ na na na haploid bacteria 2289228 2289228 51.500000 0 161 161 NCBI RefSeq GCF_000386785.2-RS_2026_01_10 2026-01-10 2386 2102 68 na GCF_000386805.2 PRJNA224116 SAMN01780110 APTU00000000.1 na 1145160 487 Neisseria meningitidis 2002020 strain=2002020 na latest Contig Major Full 2013-05-01 ASM38680v2 IGS GCA_000386805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/805/GCF_000386805.2_ASM38680v2/ na na na haploid bacteria 2201736 2201736 51.500000 0 138 138 NCBI RefSeq GCF_000386805.2-RS_2026_01_07 2026-01-07 2264 1974 81 na GCF_000386825.2 PRJNA224116 SAMN01780111 APTV00000000.1 na 1145161 487 Neisseria meningitidis NM477 strain=NM477 na latest Contig Major Full 2013-05-01 ASM38682v2 IGS GCA_000386825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/825/GCF_000386825.2_ASM38682v2/ na na na haploid bacteria 2287412 2287412 51.500000 0 155 155 NCBI RefSeq GCF_000386825.2-RS_2026_01_10 2026-01-10 2369 2066 80 na GCF_000386845.2 PRJNA224116 SAMN01780112 APTW00000000.1 na 1145162 487 Neisseria meningitidis M13265 strain=M13265 na latest Contig Major Full 2013-05-01 ASM38684v2 IGS GCA_000386845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/845/GCF_000386845.2_ASM38684v2/ na na na haploid bacteria 2156002 2156002 51.500000 0 137 137 NCBI RefSeq GCF_000386845.2-RS_2026_01_03 2026-01-03 2238 1947 80 na GCF_000386925.2 PRJNA224116 SAMN01780116 APUA00000000.1 na 1145166 487 Neisseria meningitidis 2000081 strain=2000081 na latest Contig Major Full 2013-05-01 ASM38692v2 IGS GCA_000386925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/925/GCF_000386925.2_ASM38692v2/ na na na haploid bacteria 2174475 2174475 52.000000 0 139 139 NCBI RefSeq GCF_000386925.2-RS_2026_01_11 2026-01-11 2235 1988 70 na GCF_000386945.2 PRJNA224116 SAMN01780117 APUB00000000.1 na 1145167 487 Neisseria meningitidis 2001001 strain=2001001 na latest Contig Major Full 2013-05-01 ASM38694v2 IGS GCA_000386945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/945/GCF_000386945.2_ASM38694v2/ na na na haploid bacteria 2193678 2193678 52.000000 0 136 136 NCBI RefSeq GCF_000386945.2-RS_2026_01_12 2026-01-12 2246 1954 87 na GCF_000386965.2 PRJNA224116 SAMN01780118 APUC00000000.1 na 1145168 487 Neisseria meningitidis 2004032 strain=2004032 na latest Contig Major Full 2013-05-01 ASM38696v2 IGS GCA_000386965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/965/GCF_000386965.2_ASM38696v2/ na na na haploid bacteria 2134117 2134117 52.000000 0 147 147 NCBI RefSeq GCF_000386965.2-RS_2026_01_02 2026-01-02 2198 1960 63 na GCF_000386985.2 PRJNA224116 SAMN01780119 APUD00000000.1 na 1145169 487 Neisseria meningitidis 2001213 strain=2001213 na latest Contig Major Full 2013-05-01 ASM38698v2 IGS GCA_000386985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/386/985/GCF_000386985.2_ASM38698v2/ na na na haploid bacteria 2139881 2139881 52.000000 0 124 124 NCBI RefSeq GCF_000386985.2-RS_2026_01_02 2026-01-02 2206 1952 86 na GCF_000387005.2 PRJNA224116 SAMN01780120 APUE00000000.1 na 1145170 487 Neisseria meningitidis 2004264 strain=2004264 na latest Contig Major Full 2013-05-01 ASM38700v2 IGS GCA_000387005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/005/GCF_000387005.2_ASM38700v2/ na na na haploid bacteria 2218335 2218335 52.000000 0 131 131 NCBI RefSeq GCF_000387005.2-RS_2026_01_07 2026-01-07 2293 2030 61 na GCF_000387025.2 PRJNA224116 SAMN01780121 APUF00000000.1 na 1145171 487 Neisseria meningitidis 2000175 strain=2000175 na latest Contig Major Full 2013-05-01 ASM38702v2 IGS GCA_000387025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/025/GCF_000387025.2_ASM38702v2/ na na na haploid bacteria 2228093 2228093 52.000000 0 133 133 NCBI RefSeq GCF_000387025.2-RS_2026_01_07 2026-01-07 2293 2015 97 na GCF_000387065.2 PRJNA224116 SAMN01780124 APUI00000000.1 na 1145174 487 Neisseria meningitidis 2005040 strain=2005040 na latest Contig Major Full 2013-05-01 ASM38706v2 IGS GCA_000387065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/065/GCF_000387065.2_ASM38706v2/ na na na haploid bacteria 2150669 2150669 52.000000 0 132 132 NCBI RefSeq GCF_000387065.2-RS_2026_01_11 2026-01-11 2227 1955 58 na GCF_000387085.2 PRJNA224116 SAMN01780125 APUJ00000000.1 na 1145175 487 Neisseria meningitidis 2002004 strain=2002004 na latest Contig Major Full 2013-05-01 ASM38708v2 IGS GCA_000387085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/085/GCF_000387085.2_ASM38708v2/ na na na haploid bacteria 2251482 2251482 52.000000 0 136 136 NCBI RefSeq GCF_000387085.2-RS_2026_01_07 2026-01-07 2352 2073 95 na GCF_000387125.2 PRJNA224116 SAMN01780130 APUO00000000.1 na 1145180 487 Neisseria meningitidis 2008223 strain=2008223 na latest Contig Major Full 2013-05-01 ASM38712v2 IGS GCA_000387125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/125/GCF_000387125.2_ASM38712v2/ na na na haploid bacteria 2175058 2175058 52.000000 0 130 130 NCBI RefSeq GCF_000387125.2-RS_2025_08_05 2025-08-05 2297 1996 88 na GCF_000387145.2 PRJNA224116 SAMN01780131 APUP00000000.1 na 1145181 487 Neisseria meningitidis 2003051 strain=2003051 na latest Contig Major Full 2013-05-01 ASM38714v2 IGS GCA_000387145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/145/GCF_000387145.2_ASM38714v2/ na na na haploid bacteria 2206633 2206633 51.500000 0 145 145 NCBI RefSeq GCF_000387145.2-RS_2026_01_07 2026-01-07 2273 2007 90 na GCF_000387165.2 PRJNA224116 SAMN01780132 APUQ00000000.1 na 1145182 487 Neisseria meningitidis NM271 strain=NM271 na latest Scaffold Major Full 2013-05-01 ASM38716v2 IGS GCA_000387165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/165/GCF_000387165.2_ASM38716v2/ na na na haploid bacteria 2182010 2181975 51.500000 0 139 141 NCBI RefSeq GCF_000387165.2-RS_2026_01_12 2026-01-12 2272 1958 88 na GCF_000387185.2 PRJNA224116 SAMN01780101 APTL00000000.1 na 1145151 487 Neisseria meningitidis NM82 strain=NM82 na latest Contig Major Full 2013-05-01 ASM38718v2 IGS GCA_000387185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/185/GCF_000387185.2_ASM38718v2/ na na na haploid bacteria 2242991 2242991 52.000000 0 132 132 NCBI RefSeq GCF_000387185.2-RS_2026_01_07 2026-01-07 2358 2096 85 na GCF_000387205.2 PRJNA224116 SAMN01780102 APTM00000000.1 na 1145152 487 Neisseria meningitidis NM94 strain=NM94 na latest Contig Major Full 2013-05-01 ASM38720v2 IGS GCA_000387205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/205/GCF_000387205.2_ASM38720v2/ na na na haploid bacteria 2182722 2182722 52.000000 0 135 135 NCBI RefSeq GCF_000387205.2-RS_2026_01_02 2026-01-02 2257 1983 92 na GCF_000387225.2 PRJNA224116 SAMN01780104 APTO00000000.1 na 1145154 487 Neisseria meningitidis NM313 strain=NM313 na latest Contig Major Full 2013-05-01 ASM38722v2 IGS GCA_000387225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/225/GCF_000387225.2_ASM38722v2/ na na na haploid bacteria 2179614 2179614 52.000000 0 136 136 NCBI RefSeq GCF_000387225.2-RS_2026_01_02 2026-01-02 2260 1982 92 na GCF_000387245.2 PRJNA224116 SAMN01780103 APTN00000000.1 na 1145153 487 Neisseria meningitidis NM95 strain=NM95 na latest Contig Major Full 2013-05-01 ASM38724v2 IGS GCA_000387245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/245/GCF_000387245.2_ASM38724v2/ na na na haploid bacteria 2176307 2176307 52.000000 0 131 131 NCBI RefSeq GCF_000387245.2-RS_2026_01_04 2026-01-04 2275 2015 90 na GCF_000387265.2 PRJNA224116 SAMN01780169 APVB00000000.1 na 1145193 487 Neisseria meningitidis NM80 strain=NM80 na latest Contig Major Full 2013-05-01 ASM38726v2 IGS GCA_000387265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/265/GCF_000387265.2_ASM38726v2/ na na na haploid bacteria 2116742 2116742 52.000000 0 151 151 NCBI RefSeq GCF_000387265.2-RS_2026_01_02 2026-01-02 2199 1948 79 na GCF_000387285.2 PRJNA224116 SAMN01780170 APVC00000000.1 na 1145194 487 Neisseria meningitidis NM165 strain=NM165 na latest Contig Major Full 2013-05-01 ASM38728v2 IGS GCA_000387285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/285/GCF_000387285.2_ASM38728v2/ na na na haploid bacteria 2111206 2111206 52.000000 0 138 138 NCBI RefSeq GCF_000387285.2-RS_2026_01_11 2026-01-11 2145 1881 76 na GCF_000387305.2 PRJNA224116 SAMN01780173 APVD00000000.1 na 1145195 487 Neisseria meningitidis NM3223 strain=NM3223 na latest Contig Major Full 2013-05-01 ASM38730v2 IGS GCA_000387305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/305/GCF_000387305.2_ASM38730v2/ na na na haploid bacteria 2120848 2120848 52.000000 0 141 141 NCBI RefSeq GCF_000387305.2-RS_2026_01_03 2026-01-03 2184 1905 81 na GCF_000387325.2 PRJNA224116 SAMN01780096 APTG00000000.1 na 1145146 487 Neisseria meningitidis NM23 strain=NM23 na latest Contig Major Full 2013-05-01 ASM38732v2 IGS GCA_000387325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/325/GCF_000387325.2_ASM38732v2/ na na na haploid bacteria 2174791 2174791 52.000000 0 139 139 NCBI RefSeq GCF_000387325.2-RS_2026_01_11 2026-01-11 2242 1986 75 na GCF_000387345.2 PRJNA224116 SAMN01780097 APTH00000000.1 na 1145147 487 Neisseria meningitidis NM32 strain=NM32 na latest Contig Major Full 2013-05-01 ASM38734v2 IGS GCA_000387345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/345/GCF_000387345.2_ASM38734v2/ na na na haploid bacteria 2221524 2221524 52.000000 0 141 141 NCBI RefSeq GCF_000387345.2-RS_2026_01_07 2026-01-07 2308 2040 87 na GCF_000387385.2 PRJNA224116 SAMN01780099 APTJ00000000.1 na 1145149 487 Neisseria meningitidis NM36 strain=NM36 na latest Contig Major Full 2013-05-01 ASM38738v2 IGS GCA_000387385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/385/GCF_000387385.2_ASM38738v2/ na na na haploid bacteria 2102894 2102894 52.000000 0 141 141 NCBI RefSeq GCF_000387385.2-RS_2026_01_02 2026-01-02 2197 1962 63 na GCF_000387405.2 PRJNA224116 SAMN02471346 ARXZ00000000.2 na 1324966 1428 Bacillus thuringiensis T01-328 strain=T01-328 na latest Scaffold Major Full 2013-09-11 bt_cbt_v2.0 Univ. Estadual Paulista -Julio de Mesquita Filho- Campus de Jaboticabal, Sao Paulo, CEP 14884-900, Brasil GCA_000387405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/405/GCF_000387405.2_bt_cbt_v2.0/ na na na haploid bacteria 7089686 7065898 34.500000 0 143 203 NCBI RefSeq GCF_000387405.2-RS_2025_08_04 2025-08-04 7617 7137 126 24115545 GCF_000387485.1 PRJNA224116 SAMN03081442 na na 1155775 160 Treponema pallidum str. Fribourg-Blanc strain=Fribourg-Blanc na latest Chromosome Major Full 2013-05-02 ASM38748v1 The Genome Institute GCA_000387485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/485/GCF_000387485.1_ASM38748v1/ na na na haploid bacteria 1140481 1140253 53.000000 1 1 8 NCBI RefSeq GCF_000387485.1-RS_2026_04_02 2026-04-02 1044 979 54 23638193 GCF_000387565.1 PRJNA224116 SAMN02471706 ALPY00000000.1 na 1217420 1584 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 strain=ZN7a-9 na latest Contig Major Full 2013-05-02 ASM38756v1 University of Copenhagen GCA_000387565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/565/GCF_000387565.1_ASM38756v1/ na assembly from type material na haploid bacteria 1730812 1730812 50.000000 0 75 75 NCBI RefSeq GCF_000387565.1-RS_2025_07_29 2025-07-29 1771 1623 56 na GCF_000387585.1 PRJNA224116 SAMN02469662 AMWF00000000.1 na 1233524 666 Vibrio cholerae CP1110 strain=CP1110 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/585/GCF_000387585.1_BJG-01/ na na na haploid bacteria 3925419 3925419 47.500000 0 184 184 NCBI RefSeq GCF_000387585.1-RS_2026_01_11 2026-01-11 3538 3441 39 na GCF_000387605.1 PRJNA224116 SAMN02469660 AMWR00000000.1 na 1235473 666 Vibrio cholerae CP1115 strain=CP1115 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/605/GCF_000387605.1_BJG-01/ na na na haploid bacteria 3927074 3927074 47.500000 0 183 183 NCBI RefSeq GCF_000387605.1-RS_2026_01_11 2026-01-11 3536 3436 38 na GCF_000387625.1 PRJNA224116 SAMN02469658 AMWS00000000.1 na 1235443 666 Vibrio cholerae CP1111 strain=CP1111 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/625/GCF_000387625.1_BJG-01/ na na na haploid bacteria 3927492 3927492 47.500000 0 199 199 NCBI RefSeq GCF_000387625.1-RS_2026_01_11 2026-01-11 3536 3440 36 na GCF_000387645.1 PRJNA224116 SAMN02469664 AMWT00000000.1 na 1235444 666 Vibrio cholerae CP1112 strain=CP1112 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/645/GCF_000387645.1_BJG-01/ na na na haploid bacteria 3927706 3927706 47.500000 0 193 193 NCBI RefSeq GCF_000387645.1-RS_2026_01_11 2026-01-11 3540 3440 38 na GCF_000387665.1 PRJNA224116 SAMN02469659 AMWU00000000.1 na 1235454 666 Vibrio cholerae CP1113 strain=CP1113 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/665/GCF_000387665.1_BJG-01/ na na na haploid bacteria 3925787 3925787 47.500000 0 186 186 NCBI RefSeq GCF_000387665.1-RS_2026_01_11 2026-01-11 3534 3439 37 na GCF_000387685.1 PRJNA224116 SAMN02469661 AMWV00000000.1 na 1235456 666 Vibrio cholerae CP1114 strain=CP1114 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/685/GCF_000387685.1_BJG-01/ na na na haploid bacteria 3925539 3925539 47.500000 0 199 199 NCBI RefSeq GCF_000387685.1-RS_2026_01_11 2026-01-11 3543 3444 36 na GCF_000387705.1 PRJNA224116 SAMN02469665 AMWW00000000.1 na 1235442 666 Vibrio cholerae CP1117 strain=CP1117 na latest Contig Major Full 2013-05-02 BJG-01 CosmosID GCA_000387705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/705/GCF_000387705.1_BJG-01/ na na na haploid bacteria 3925548 3925548 47.500000 0 183 183 NCBI RefSeq GCF_000387705.1-RS_2026_01_11 2026-01-11 3533 3438 39 na GCF_000387725.1 PRJNA224116 SAMN02469663 ANNM00000000.1 na 1294275 666 Vibrio cholerae CP1116 strain=CP1116 na latest Scaffold Major Full 2013-05-02 BJG-01 CosmosID GCA_000387725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/725/GCF_000387725.1_BJG-01/ na na na haploid bacteria 3932707 3932592 47.500000 0 207 217 NCBI RefSeq GCF_000387725.1-RS_2025_08_07 2025-08-07 3547 3447 37 na GCF_000387745.2 PRJNA224116 SAMN02471521 na na 1213463 2104 Mycoplasmoides pneumoniae 19294 strain=19294 na latest Complete Genome Major Full 2015-08-21 ASM38774v2 University of Alabama at Birmingham GCA_000387745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/745/GCF_000387745.2_ASM38774v2/ na na na haploid bacteria 817313 817313 40.000000 1 1 1 NCBI RefSeq GCF_000387745.2-RS_2026_02_26 2026-02-26 771 677 42 26275904 GCF_000387765.1 PRJNA224116 SAMN02470242 ARZA00000000.1 reference genome 1304284 1304284 Caldisalinibacter kiritimatiensis strain=L21-TH-D2 na latest Contig Major Full 2013-05-02 L21-THTYG Leibniz Institute DSMZ GCA_000387765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/765/GCF_000387765.1_L21-THTYG/ na assembly from type material na haploid bacteria 2788198 2788198 30.000000 0 289 289 NCBI RefSeq GCF_000387765.1-RS_2026_04_14 2026-04-14 2801 2726 60 na GCF_000387785.2 PRJNA224116 SAMN02436021 APNX00000000.1 na 1308983 562 Escherichia coli HM65 strain=HM65 na latest Contig Minor Full 2013-05-02 ASM38778v2 Institute for Genome Sciences GCA_000387785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/785/GCF_000387785.2_ASM38778v2/ na na na haploid bacteria 5156838 5156838 50.500000 0 75 75 NCBI RefSeq GCF_000387785.2-RS_2025_06_04 2025-06-04 5094 4741 98 23821517 GCF_000387805.2 PRJNA224116 SAMN02436018 APNW00000000.1 na 1308540 562 Escherichia coli HM26 strain=HM26 na latest Contig Minor Full 2013-05-02 ASM38780v2 Institute for Genome Sciences GCA_000387805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/805/GCF_000387805.2_ASM38780v2/ na na na haploid bacteria 5265784 5265784 50.500000 0 95 95 NCBI RefSeq GCF_000387805.2-RS_2025_06_08 2025-06-08 5102 4802 107 23821517 GCF_000387825.2 PRJNA224116 SAMN02436019 APNU00000000.1 na 1308981 562 Escherichia coli HM27 strain=HM27 na latest Contig Minor Full 2013-05-02 ASM38782v2 Institute for Genome Sciences GCA_000387825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/825/GCF_000387825.2_ASM38782v2/ na na na haploid bacteria 5161340 5161340 50.500000 0 284 284 NCBI RefSeq GCF_000387825.2-RS_2026_03_21 2026-03-21 5118 4742 92 23821517 GCF_000387845.2 PRJNA224116 SAMN02436022 APNY00000000.1 na 1308982 562 Escherichia coli HM46 strain=HM46 na latest Contig Minor Full 2013-05-02 ASM38784v2 Institute for Genome Sciences GCA_000387845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/845/GCF_000387845.2_ASM38784v2/ na na na haploid bacteria 4961831 4961831 51.000000 0 42 42 NCBI RefSeq GCF_000387845.2-RS_2025_04_26 2025-04-26 4810 4583 100 23821517 GCF_000387865.2 PRJNA224116 SAMN02436020 APNV00000000.1 na 1308984 562 Escherichia coli HM69 strain=HM69 na latest Contig Minor Full 2013-05-02 ASM38786v2 Institute for Genome Sciences GCA_000387865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/865/GCF_000387865.2_ASM38786v2/ na na na haploid bacteria 5367837 5367837 50.500000 0 124 124 NCBI RefSeq GCF_000387865.2-RS_2025_04_26 2025-04-26 5340 5024 97 23821517 GCF_000388115.1 PRJNA224116 SAMN02471397 AQGQ00000000.1 na 1268236 271417 Aeromonas molluscorum 848 strain=848 na latest Contig Major Full 2013-05-03 Amol1.0 Universitat de Barcelona GCA_000388115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/115/GCF_000388115.1_Amol1.0/ na assembly from type material na haploid bacteria 4236171 4236171 59.000000 0 309 309 NCBI RefSeq GCF_000388115.1-RS_2025_12_11 2025-12-11 4146 3789 76 23788549 GCF_000388135.1 PRJNA224116 SAMN02469982 AOUO00000000.1 na 1292037 208444 Amycolatopsis vancoresmycina DSM 44592 strain=DSM 44592 na latest Contig Major Full 2013-05-03 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000388135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/135/GCF_000388135.1_Whole_genome_assembly/ na assembly from type material na haploid bacteria 9036495 9036495 72.000000 0 784 784 NCBI RefSeq GCF_000388135.1-RS_2026_03_30 2026-03-30 8885 8335 61 na GCF_000388155.1 PRJNA224116 SAMN02469849 AOUE00000000.1 na 1297584 546 Citrobacter freundii GTC 09629 strain=GTC 09629 na latest Contig Major Full 2013-05-03 Whole genome assembly Institute of Microbial Technology (IMTECH), Chandigarh, India 160036 GCA_000388155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/155/GCF_000388155.1_Whole_genome_assembly/ na na na haploid bacteria 5053892 5053892 52.000000 0 79 79 NCBI RefSeq GCF_000388155.1-RS_2026_01_30 2026-01-30 4945 4738 90 na GCF_000388175.3 PRJNA224116 SAMN02472140 ARPM00000000.3 reference genome 1321371 1169117 Holospora undulata HU1 strain=HU1 na latest Scaffold Major Full 2014-01-27 ASM38817v3 Yamaguchi University GCA_000388175.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/175/GCF_000388175.3_ASM38817v3/ na na na haploid bacteria 1402636 1402586 36.000000 0 203 208 NCBI RefSeq GCF_000388175.3-RS_2025_12_09 2025-12-09 1533 1373 49 23969064 GCF_000388195.1 PRJNA224116 SAMEA2272509 CATQ00000000.1 na 1265673 28901 Salmonella enterica subsp. enterica serovar Agona str. 01.O.05 strain=01.O.05 na latest Scaffold Major Full 2013-04-30 01.O.05 ERI GCA_000388195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/195/GCF_000388195.1_01.O.05/ na na na haploid bacteria 4791364 4789641 52.000000 0 161 186 NCBI RefSeq GCF_000388195.1-RS_2025_08_15 2025-08-15 4718 4473 88 23637636 GCF_000388215.1 PRJNA224116 SAMEA2271922 CATP00000000.1 na 1265665 28901 Salmonella enterica subsp. enterica serovar Agona str. 02.O.05 strain=02.O.05 na latest Scaffold Major Full 2013-04-30 02.O.05 ERI GCA_000388215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/215/GCF_000388215.1_02.O.05/ na na na haploid bacteria 4952200 4922284 52.000000 0 174 489 NCBI RefSeq GCF_000388215.1-RS_2025_05_23 2025-05-23 4940 4663 90 23637636 GCF_000388235.1 PRJNA224116 SAMEA2272331 CATO00000000.1 na 1265636 28901 Salmonella enterica subsp. enterica serovar Agona str. 03.O.05 strain=03.O.05 na latest Scaffold Major Full 2013-04-30 03.O.05 ERI GCA_000388235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/235/GCF_000388235.1_03.O.05/ na na na haploid bacteria 4883733 4882497 52.000000 0 183 201 NCBI RefSeq GCF_000388235.1-RS_2025_05_23 2025-05-23 4817 4583 81 23637636 GCF_000388255.1 PRJNA224116 SAMEA2272255 CATN00000000.1 na 1265657 28901 Salmonella enterica subsp. enterica serovar Agona str. 04.O.05 strain=04.O.05 na latest Scaffold Major Full 2013-04-30 04.O.05 ERI GCA_000388255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/255/GCF_000388255.1_04.O.05/ na na na haploid bacteria 4787160 4785217 52.000000 0 178 198 NCBI RefSeq GCF_000388255.1-RS_2025_05_23 2025-05-23 4734 4485 88 23637636 GCF_000388275.1 PRJNA224116 SAMEA2272786 CATM00000000.1 na 1265678 28901 Salmonella enterica subsp. enterica serovar Agona str. 05.O.06 strain=05.O.06 na latest Scaffold Major Full 2013-04-30 05.O.06 ERI GCA_000388275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/275/GCF_000388275.1_05.O.06/ na na na haploid bacteria 4788176 4785197 52.000000 0 198 239 NCBI RefSeq GCF_000388275.1-RS_2025_05_22 2025-05-22 4757 4496 85 23637636 GCF_000388295.1 PRJNA224116 SAMEA2272471 CATL00000000.1 na 1265642 28901 Salmonella enterica subsp. enterica serovar Agona str. 06.O.05 strain=06.O.05 na latest Scaffold Major Full 2013-04-30 06.O.05 ERI GCA_000388295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/295/GCF_000388295.1_06.O.05/ na na na haploid bacteria 4888299 4885817 52.000000 0 176 210 NCBI RefSeq GCF_000388295.1-RS_2025_05_23 2025-05-23 4836 4595 80 23637636 GCF_000388315.1 PRJNA224116 SAMEA2272241 CATK00000000.1 na 1265611 28901 Salmonella enterica subsp. enterica serovar Agona str. 07.O.05 strain=07.O.05 na latest Scaffold Major Full 2013-04-30 07.O.05 ERI GCA_000388315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/315/GCF_000388315.1_07.O.05/ na na na haploid bacteria 4887976 4886166 52.000000 0 173 194 NCBI RefSeq GCF_000388315.1-RS_2025_08_15 2025-08-15 4836 4590 89 23637636 GCF_000388335.1 PRJNA224116 SAMEA2272326 CATJ00000000.1 na 1265637 28901 Salmonella enterica subsp. enterica serovar Agona str. 08.A.05 strain=08.A.05 na latest Scaffold Major Full 2013-04-30 08.A.05 ERI GCA_000388335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/335/GCF_000388335.1_08.A.05/ na na na haploid bacteria 4808520 4805624 52.000000 0 158 180 NCBI RefSeq GCF_000388335.1-RS_2025_05_23 2025-05-23 4717 4480 88 23637636 GCF_000388355.1 PRJNA224116 SAMEA2272612 CATF00000000.1 na 1265658 28901 Salmonella enterica subsp. enterica serovar Agona str. 09.F.08 strain=09.F.08 na latest Scaffold Major Full 2013-05-01 09.F.08 ERI GCA_000388355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/355/GCF_000388355.1_09.F.08/ na na na haploid bacteria 4718472 4716149 52.000000 0 144 170 NCBI RefSeq GCF_000388355.1-RS_2025_05_22 2025-05-22 4619 4376 96 23637636 GCF_000388375.1 PRJNA224116 SAMEA2272223 CATR00000000.1 na 1265679 28901 Salmonella enterica subsp. enterica serovar Agona str. 10.A.05 strain=10.A.05 na latest Scaffold Major Full 2013-04-30 10.A.05 ERI GCA_000388375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/375/GCF_000388375.1_10.A.05/ na na na haploid bacteria 4711344 4708785 52.000000 0 158 183 NCBI RefSeq GCF_000388375.1-RS_2025_05_23 2025-05-23 4609 4373 88 23637636 GCF_000388395.1 PRJNA224116 SAMEA2272500 CATE00000000.1 na 1265643 28901 Salmonella enterica subsp. enterica serovar Agona str. 11.A.05 strain=11.A.05 na latest Scaffold Major Full 2013-05-01 11.A.05 ERI GCA_000388395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/395/GCF_000388395.1_11.A.05/ na na na haploid bacteria 4734406 4730080 52.000000 0 144 186 NCBI RefSeq GCF_000388395.1-RS_2025_05_22 2025-05-22 4636 4394 86 23637636 GCF_000388415.1 PRJNA224116 SAMEA2272488 CATD00000000.1 na 1265612 28901 Salmonella enterica subsp. enterica serovar Agona str. 12.A.06 strain=12.A.06 na latest Scaffold Major Full 2013-05-01 12.A.06 ERI GCA_000388415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/415/GCF_000388415.1_12.A.06/ na na na haploid bacteria 4715039 4712277 52.000000 0 145 172 NCBI RefSeq GCF_000388415.1-RS_2025_05_23 2025-05-23 4619 4381 94 23637636 GCF_000388435.1 PRJNA224116 SAMEA2272111 CATC00000000.1 na 1265638 28901 Salmonella enterica subsp. enterica serovar Agona str. 13.E.05 strain=13.E.05 na latest Scaffold Major Full 2013-05-01 13.E.05 ERI GCA_000388435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/435/GCF_000388435.1_13.E.05/ na na na haploid bacteria 4753411 4752301 52.000000 0 153 164 NCBI RefSeq GCF_000388435.1-RS_2025_08_14 2025-08-14 4666 4430 91 23637636 GCF_000388455.1 PRJNA224116 SAMEA2272608 CATB00000000.1 na 1265659 28901 Salmonella enterica subsp. enterica serovar Agona str. 14.E.05 strain=14.E.05 na latest Scaffold Major Full 2013-05-01 14.E.05 ERI GCA_000388455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/455/GCF_000388455.1_14.E.05/ na na na haploid bacteria 4753553 4751647 52.000000 0 146 163 NCBI RefSeq GCF_000388455.1-RS_2025_05_22 2025-05-22 4660 4430 84 23637636 GCF_000388475.1 PRJNA224116 SAMEA2272219 CATA00000000.1 na 1265680 28901 Salmonella enterica subsp. enterica serovar Agona str. 15.H.03 strain=15.H.03 na latest Scaffold Major Full 2013-05-01 15.H.03 ERI GCA_000388475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/475/GCF_000388475.1_15.H.03/ na na na haploid bacteria 4752453 4751978 52.000000 0 158 165 NCBI RefSeq GCF_000388475.1-RS_2025_05_23 2025-05-23 4671 4430 87 23637636 GCF_000388495.1 PRJNA224116 SAMEA2272289 CASY00000000.1 na 1265613 28901 Salmonella enterica subsp. enterica serovar Agona str. 17.H.06 strain=17.H.06 na latest Scaffold Major Full 2013-05-01 17.H.06 ERI GCA_000388495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/495/GCF_000388495.1_17.H.06/ na na na haploid bacteria 4787848 4786629 52.000000 0 151 165 NCBI RefSeq GCF_000388495.1-RS_2025_05_23 2025-05-23 4727 4484 81 23637636 GCF_000388515.1 PRJNA224116 SAMEA2272390 CASX00000000.1 na 1265644 28901 Salmonella enterica subsp. enterica serovar Agona str. 18.H.07 strain=18.H.07 na latest Scaffold Major Full 2013-05-01 18.H.07 ERI GCA_000388515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/515/GCF_000388515.1_18.H.07/ na na na haploid bacteria 4778908 4776251 52.000000 0 149 185 NCBI RefSeq GCF_000388515.1-RS_2025_05_23 2025-05-23 4725 4476 88 23637636 GCF_000388535.1 PRJNA224116 SAMEA2272782 CASW00000000.1 na 1265668 28901 Salmonella enterica subsp. enterica serovar Agona str. 19.F.03 strain=19.F.03 na latest Scaffold Major Full 2013-05-01 19.F.03 ERI GCA_000388535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/535/GCF_000388535.1_19.F.03/ na na na haploid bacteria 4719616 4717059 52.000000 0 156 188 NCBI RefSeq GCF_000388535.1-RS_2025_05_22 2025-05-22 4631 4398 81 23637636 GCF_000388555.1 PRJNA224116 SAMEA2272286 CASV00000000.1 na 1265614 28901 Salmonella enterica subsp. enterica serovar Agona str. 20.H.06 strain=20.H.06 na latest Scaffold Major Full 2013-05-01 20.H.06 ERI GCA_000388555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/555/GCF_000388555.1_20.H.06/ na na na haploid bacteria 4848954 4845251 52.000000 0 212 259 NCBI RefSeq GCF_000388555.1-RS_2025_03_20 2025-03-20 4826 4532 101 23637636 GCF_000388575.1 PRJNA224116 SAMEA2272677 CASU00000000.1 na 1265650 28901 Salmonella enterica subsp. enterica serovar Agona str. 21.H.10 strain=21.H.10 na latest Scaffold Major Full 2013-05-01 21.H.10 ERI GCA_000388575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/575/GCF_000388575.1_21.H.10/ na na na haploid bacteria 4873274 4871162 52.000000 0 165 193 NCBI RefSeq GCF_000388575.1-RS_2025_05_23 2025-05-23 4785 4566 72 23637636 GCF_000388595.1 PRJNA224116 SAMEA2272603 CAST00000000.1 na 1265618 28901 Salmonella enterica subsp. enterica serovar Agona str. 22.H.04 strain=22.H.04 na latest Scaffold Major Full 2013-05-01 22.H.04 ERI GCA_000388595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/595/GCF_000388595.1_22.H.04/ na na na haploid bacteria 4778651 4777650 52.000000 0 173 186 NCBI RefSeq GCF_000388595.1-RS_2025_05_22 2025-05-22 4704 4456 92 23637636 GCF_000388615.1 PRJNA224116 SAMEA2272180 CASS00000000.1 na 1265639 28901 Salmonella enterica subsp. enterica serovar Agona str. 23.F.01 strain=23.F.01 na latest Scaffold Major Full 2013-05-01 23.F.01 ERI GCA_000388615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/615/GCF_000388615.1_23.F.01/ na na na haploid bacteria 4817447 4815018 52.000000 0 171 205 NCBI RefSeq GCF_000388615.1-RS_2025_08_15 2025-08-15 4738 4495 77 23637636 GCF_000388635.1 PRJNA224116 SAMEA2272554 CASR00000000.1 na 1265660 28901 Salmonella enterica subsp. enterica serovar Agona str. 24.H.04 strain=24.H.04 na latest Scaffold Major Full 2013-05-01 24.H.04 ERI GCA_000388635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/635/GCF_000388635.1_24.H.04/ na na na haploid bacteria 4822631 4821080 52.000000 0 149 174 NCBI RefSeq GCF_000388635.1-RS_2025_05_22 2025-05-22 4757 4509 87 23637636 GCF_000388655.1 PRJNA224116 SAMEA2272268 CATX00000000.1 na 1265681 28901 Salmonella enterica subsp. enterica serovar Agona str. 26.F.98 strain=26.F.98 na latest Scaffold Major Full 2013-04-30 26.F.98 ERI GCA_000388655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/655/GCF_000388655.1_26.F.98/ na na na haploid bacteria 4771558 4731017 52.000000 0 154 480 NCBI RefSeq GCF_000388655.1-RS_2025_05_22 2025-05-22 4711 4434 85 23637636 GCF_000388675.1 PRJNA224116 SAMEA2272674 CASQ00000000.1 na 1265645 28901 Salmonella enterica subsp. enterica serovar Agona str. 27.O.98 strain=27.O.98 na latest Scaffold Major Full 2013-05-01 27.O.98 ERI GCA_000388675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/675/GCF_000388675.1_27.O.98/ na na na haploid bacteria 4738572 4736427 52.000000 0 183 210 NCBI RefSeq GCF_000388675.1-RS_2025_05_23 2025-05-23 4671 4422 86 23637636 GCF_000388695.1 PRJNA224116 SAMEA2272387 CASP00000000.1 na 1265615 28901 Salmonella enterica subsp. enterica serovar Agona str. 28.O.08 strain=28.O.08 na latest Scaffold Major Full 2013-05-01 28.O.08 ERI GCA_000388695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/695/GCF_000388695.1_28.O.08/ na na na haploid bacteria 4737514 4735961 52.000000 0 180 200 NCBI RefSeq GCF_000388695.1-RS_2025_09_21 2025-09-21 4678 4423 91 23637636 GCF_000388715.1 PRJNA224116 SAMEA2272057 CASO00000000.1 na 1265640 28901 Salmonella enterica subsp. enterica serovar Agona str. 29.O.08 strain=29.O.08 na latest Scaffold Major Full 2013-05-01 29.O.08 ERI GCA_000388715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/715/GCF_000388715.1_29.O.08/ na na na haploid bacteria 4735138 4729158 52.000000 0 224 318 NCBI RefSeq GCF_000388715.1-RS_2025_09_21 2025-09-21 4764 4451 90 23637636 GCF_000388735.1 PRJNA224116 SAMEA2272549 CATW00000000.1 na 1265661 28901 Salmonella enterica subsp. enterica serovar Agona str. 30.H.04 strain=30.H.04 na latest Scaffold Major Full 2013-04-30 30.H.04 ERI GCA_000388735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/735/GCF_000388735.1_30.H.04/ na na na haploid bacteria 4872238 4867453 52.000000 0 160 212 NCBI RefSeq GCF_000388735.1-RS_2025_05_23 2025-05-23 4822 4548 95 23637636 GCF_000388755.1 PRJNA224116 SAMEA2272173 CASN00000000.1 na 1265682 28901 Salmonella enterica subsp. enterica serovar Agona str. 31.H.09 strain=31.H.09 na latest Scaffold Major Full 2013-05-01 31.H.09 ERI GCA_000388755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/755/GCF_000388755.1_31.H.09/ na na na haploid bacteria 4710985 4709714 52.000000 0 141 154 NCBI RefSeq GCF_000388755.1-RS_2025_05_21 2025-05-21 4597 4365 91 23637636 GCF_000388775.1 PRJNA224116 SAMEA2272669 CASM00000000.1 na 1265646 28901 Salmonella enterica subsp. enterica serovar Agona str. 32.A.00 strain=32.A.00 na latest Scaffold Major Full 2013-05-01 32.A.00 ERI GCA_000388775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/775/GCF_000388775.1_32.A.00/ na na na haploid bacteria 4827802 4825528 52.000000 0 248 273 NCBI RefSeq GCF_000388775.1-RS_2025_05_21 2025-05-21 4803 4545 76 23637636 GCF_000388795.1 PRJNA224116 SAMEA2272279 CASL00000000.1 na 1265616 28901 Salmonella enterica subsp. enterica serovar Agona str. 33.A.05 strain=33.A.05 na latest Scaffold Major Full 2013-05-01 33.A.05 ERI GCA_000388795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/795/GCF_000388795.1_33.A.05/ na na na haploid bacteria 4721976 4719513 52.000000 0 154 190 NCBI RefSeq GCF_000388795.1-RS_2025_05_21 2025-05-21 4612 4383 86 23637636 GCF_000388815.1 PRJNA224116 SAMEA2271973 CASK00000000.1 na 1265641 28901 Salmonella enterica subsp. enterica serovar Agona str. 34.H.09 strain=34.H.09 na latest Scaffold Major Full 2013-05-01 34.H.09 ERI GCA_000388815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/815/GCF_000388815.1_34.H.09/ na na na haploid bacteria 4782513 4780612 52.000000 0 153 167 NCBI RefSeq GCF_000388815.1-RS_2025_05_22 2025-05-22 4692 4449 92 23637636 GCF_000388835.1 PRJNA224116 SAMEA2272462 CASJ00000000.1 na 1265669 28901 Salmonella enterica subsp. enterica serovar Agona str. 35.H.08 strain=35.H.08 na latest Scaffold Major Full 2013-05-01 35.H.08 ERI GCA_000388835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/835/GCF_000388835.1_35.H.08/ na na na haploid bacteria 4750099 4747407 52.000000 0 132 172 NCBI RefSeq GCF_000388835.1-RS_2025_05_21 2025-05-21 4684 4436 95 23637636 GCF_000388855.1 PRJNA224116 SAMEA2272707 CASI00000000.1 na 1265617 28901 Salmonella enterica subsp. enterica serovar Agona str. 36.H.00 strain=36.H.00 na latest Scaffold Major Full 2013-05-01 36.H.00 ERI GCA_000388855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/855/GCF_000388855.1_36.H.00/ na na na haploid bacteria 4793315 4790193 52.000000 0 150 182 NCBI RefSeq GCF_000388855.1-RS_2025_05_21 2025-05-21 4714 4477 85 23637636 GCF_000388875.1 PRJNA224116 SAMEA2272321 CASH00000000.1 na 1265651 28901 Salmonella enterica subsp. enterica serovar Agona str. 37.F.02 strain=37.F.02 na latest Scaffold Major Full 2013-05-01 37.F.02 ERI GCA_000388875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/875/GCF_000388875.1_37.F.02/ na na na haploid bacteria 4733023 4730887 52.000000 0 151 183 NCBI RefSeq GCF_000388875.1-RS_2025_08_15 2025-08-15 4626 4402 75 23637636 GCF_000388895.1 PRJNA224116 SAMEA2272601 CASG00000000.1 na 1265621 28901 Salmonella enterica subsp. enterica serovar Agona str. 38.O.03 strain=38.O.03 na latest Scaffold Major Full 2013-05-01 38.O.03 ERI GCA_000388895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/895/GCF_000388895.1_38.O.03/ na na na haploid bacteria 4744968 4735359 52.000000 0 171 295 NCBI RefSeq GCF_000388895.1-RS_2025_05_23 2025-05-23 4695 4417 95 23637636 GCF_000388915.1 PRJNA224116 SAMEA2272755 CATV00000000.1 na 1265647 28901 Salmonella enterica subsp. enterica serovar Agona str. 39.O.03 strain=39.O.03 na latest Scaffold Major Full 2013-04-30 39.O.03 ERI GCA_000388915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/915/GCF_000388915.1_39.O.03/ na na na haploid bacteria 4766772 4647302 52.000000 0 141 1109 NCBI RefSeq GCF_000388915.1-RS_2025_05_21 2025-05-21 4999 4543 68 23637636 GCF_000388935.1 PRJNA224116 SAMEA2272714 CASF00000000.1 na 1265652 28901 Salmonella enterica subsp. enterica serovar Agona str. 41.E.09 strain=41.E.09 na latest Scaffold Major Full 2013-05-01 41.E.09 ERI GCA_000388935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/935/GCF_000388935.1_41.E.09/ na na na haploid bacteria 4743394 4736800 52.000000 0 303 383 NCBI RefSeq GCF_000388935.1-RS_2025_05_21 2025-05-21 4799 4494 83 23637636 GCF_000388955.1 PRJNA224116 SAMEA2272245 CASE00000000.1 na 1265622 28901 Salmonella enterica subsp. enterica serovar Agona str. 40.E.08 strain=40.E.08 na latest Scaffold Major Full 2013-05-01 40.E.08 ERI GCA_000388955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/955/GCF_000388955.1_40.E.08/ na na na haploid bacteria 4815535 4813156 52.000000 0 123 151 NCBI RefSeq GCF_000388955.1-RS_2025_05_21 2025-05-21 4758 4509 99 23637636 GCF_000388975.1 PRJNA224116 SAMEA2272368 CASD00000000.1 na 1265648 28901 Salmonella enterica subsp. enterica serovar Agona str. 42.E.09 strain=42.E.09 na latest Scaffold Major Full 2013-05-01 42.E.09 ERI GCA_000388975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/975/GCF_000388975.1_42.E.09/ na na na haploid bacteria 4739669 4736145 52.000000 0 298 344 NCBI RefSeq GCF_000388975.1-RS_2025_05_21 2025-05-21 4793 4488 96 23637636 GCF_000388995.1 PRJNA224116 SAMEA2272363 CASC00000000.1 na 1265670 28901 Salmonella enterica subsp. enterica serovar Agona str. 43.E.09 strain=43.E.09 na latest Scaffold Major Full 2013-05-01 43.E.09 ERI GCA_000388995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/388/995/GCF_000388995.1_43.E.09/ na na na haploid bacteria 4745097 4743212 52.000000 0 145 164 NCBI RefSeq GCF_000388995.1-RS_2025_03_23 2025-03-23 4655 4415 99 23637636 GCF_000389015.1 PRJNA224116 SAMEA2272251 CASB00000000.1 na 1265624 28901 Salmonella enterica subsp. enterica serovar Agona str. 44.E.09 strain=44.E.09 na latest Scaffold Major Full 2013-05-01 44.E.09 ERI GCA_000389015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/015/GCF_000389015.1_44.E.09/ na na na haploid bacteria 4739056 4733894 52.000000 0 326 386 NCBI RefSeq GCF_000389015.1-RS_2025_05_21 2025-05-21 4820 4495 95 23637636 GCF_000389035.1 PRJNA224116 SAMEA2272740 CASA00000000.1 na 1265653 28901 Salmonella enterica subsp. enterica serovar Agona str. 45.E.09 strain=45.E.09 na latest Scaffold Major Full 2013-05-01 45.E.09 ERI GCA_000389035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/035/GCF_000389035.1_45.E.09/ na na na haploid bacteria 4736241 4734205 52.000000 0 229 252 NCBI RefSeq GCF_000389035.1-RS_2025_05_21 2025-05-21 4704 4446 81 23637636 GCF_000389055.1 PRJNA224116 SAMEA2272137 CARZ00000000.1 na 1265623 28901 Salmonella enterica subsp. enterica serovar Agona str. 46.E.09 strain=46.E.09 na latest Scaffold Major Full 2013-04-30 46.E.09 ERI GCA_000389055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/055/GCF_000389055.1_46.E.09/ na na na haploid bacteria 4736989 4734722 52.000000 0 221 250 NCBI RefSeq GCF_000389055.1-RS_2025_03_20 2025-03-20 4701 4451 77 23637636 GCF_000389075.1 PRJNA224116 SAMEA2272635 CARY00000000.1 na 1265675 28901 Salmonella enterica subsp. enterica serovar Agona str. 48.E.08 strain=48.E.08 na latest Scaffold Major Full 2013-04-30 48.E.08 ERI GCA_000389075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/075/GCF_000389075.1_48.E.08/ na na na haploid bacteria 4746901 4744163 52.000000 0 148 177 NCBI RefSeq GCF_000389075.1-RS_2025_05_21 2025-05-21 4658 4413 92 23637636 GCF_000389095.1 PRJNA224116 SAMEA2272022 CATU00000000.1 na 1265625 28901 Salmonella enterica subsp. enterica serovar Agona str. 49.E.09 strain=49.E.09 na latest Scaffold Major Full 2013-04-30 49.E.09 ERI GCA_000389095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/095/GCF_000389095.1_49.E.09/ na na na haploid bacteria 4748346 4744086 52.000000 0 152 200 NCBI RefSeq GCF_000389095.1-RS_2025_05_21 2025-05-21 4683 4418 101 23637636 GCF_000389115.1 PRJNA224116 SAMEA2272351 CARX00000000.1 na 1265662 28901 Salmonella enterica subsp. enterica serovar Agona str. 50.E.08 strain=50.E.08 na latest Scaffold Major Full 2013-04-30 50.E.08 ERI GCA_000389115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/115/GCF_000389115.1_50.E.08/ na na na haploid bacteria 4783943 4741183 52.000000 0 155 566 NCBI RefSeq GCF_000389115.1-RS_2025_05_23 2025-05-23 4750 4460 86 23637636 GCF_000389135.1 PRJNA224116 SAMEA2272743 CARW00000000.1 na 1265628 28901 Salmonella enterica subsp. enterica serovar Agona str. 51.E.09 strain=51.E.09 na latest Scaffold Major Full 2013-04-30 51.E.09 ERI GCA_000389135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/135/GCF_000389135.1_51.E.09/ na na na haploid bacteria 4738196 4735777 52.000000 0 222 253 NCBI RefSeq GCF_000389135.1-RS_2025_05_23 2025-05-23 4698 4437 77 23637636 GCF_000389155.1 PRJNA224116 SAMEA2272256 CARV00000000.1 na 1265655 28901 Salmonella enterica subsp. enterica serovar Agona str. 52.F.08 strain=52.F.08 na latest Scaffold Major Full 2013-04-30 52.F.08 ERI GCA_000389155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/155/GCF_000389155.1_52.F.08/ na na na haploid bacteria 4713502 4711528 52.000000 0 142 161 NCBI RefSeq GCF_000389155.1-RS_2025_05_23 2025-05-23 4601 4371 82 23637636 GCF_000389175.1 PRJNA224116 SAMEA2272640 CARU00000000.1 na 1265676 28901 Salmonella enterica subsp. enterica serovar Agona str. 53.F.08 strain=53.F.08 na latest Scaffold Major Full 2013-04-30 53.F.08 ERI GCA_000389175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/175/GCF_000389175.1_53.F.08/ na na na haploid bacteria 4712780 4711892 52.000000 0 141 151 NCBI RefSeq GCF_000389175.1-RS_2025_05_23 2025-05-23 4614 4366 100 23637636 GCF_000389195.1 PRJNA224116 SAMEA2272141 CART00000000.1 na 1265626 28901 Salmonella enterica subsp. enterica serovar Agona str. 54.O.08 strain=54.O.08 na latest Scaffold Major Full 2013-04-30 54.O.08 ERI GCA_000389195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/195/GCF_000389195.1_54.O.08/ na na na haploid bacteria 4711670 4709399 52.000000 0 146 165 NCBI RefSeq GCF_000389195.1-RS_2025_05_23 2025-05-23 4601 4363 93 23637636 GCF_000389215.1 PRJNA224116 SAMEA2272720 CARS00000000.1 na 1265663 28901 Salmonella enterica subsp. enterica serovar Agona str. 55.U.08 strain=55.U.08 na latest Scaffold Major Full 2013-04-30 55.U.08 ERI GCA_000389215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/215/GCF_000389215.1_55.U.08/ na na na haploid bacteria 4710474 4708322 52.000000 0 138 157 NCBI RefSeq GCF_000389215.1-RS_2025_09_21 2025-09-21 4605 4379 87 23637636 GCF_000389235.1 PRJNA224116 SAMEA2272231 CARR00000000.1 na 1265629 28901 Salmonella enterica subsp. enterica serovar Agona str. 56.O.08 strain=56.O.08 na latest Scaffold Major Full 2013-04-30 56.O.08 ERI GCA_000389235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/235/GCF_000389235.1_56.O.08/ na na na haploid bacteria 4709187 4707503 52.000000 0 139 158 NCBI RefSeq GCF_000389235.1-RS_2025_05_23 2025-05-23 4615 4370 89 23637636 GCF_000389255.1 PRJNA224116 SAMEA2271932 CATT00000000.1 na 1265656 28901 Salmonella enterica subsp. enterica serovar Agona str. 57.A.08 strain=57.A.08 na latest Scaffold Major Full 2013-04-30 57.A.08 ERI GCA_000389255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/255/GCF_000389255.1_57.A.08/ na na na haploid bacteria 4703678 4700492 52.000000 0 166 196 NCBI RefSeq GCF_000389255.1-RS_2025_05_23 2025-05-23 4710 4322 83 23637636 GCF_000389275.1 PRJNA224116 SAMEA2272337 CARQ00000000.1 na 1265677 28901 Salmonella enterica subsp. enterica serovar Agona str. 58.E.08 strain=58.E.08 na latest Scaffold Major Full 2013-04-30 58.E.08 ERI GCA_000389275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/275/GCF_000389275.1_58.E.08/ na na na haploid bacteria 4712562 4709862 52.000000 0 137 161 NCBI RefSeq GCF_000389275.1-RS_2025_05_23 2025-05-23 4611 4376 95 23637636 GCF_000389295.1 PRJNA224116 SAMEA2272035 CARP00000000.1 na 1265631 28901 Salmonella enterica subsp. enterica serovar Agona str. 59.F.08 strain=59.F.08 na latest Scaffold Major Full 2013-04-30 59.F.08 ERI GCA_000389295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/295/GCF_000389295.1_59.F.08/ na na na haploid bacteria 4710013 4708843 52.000000 0 134 144 NCBI RefSeq GCF_000389295.1-RS_2025_05_23 2025-05-23 4600 4367 96 23637636 GCF_000389315.1 PRJNA224116 SAMEA2271935 CARO00000000.1 na 1265664 28901 Salmonella enterica subsp. enterica serovar Agona str. 60.O.08 strain=60.O.08 na latest Scaffold Major Full 2013-04-30 60.O.08 ERI GCA_000389315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/315/GCF_000389315.1_60.O.08/ na na na haploid bacteria 4714157 4707997 52.000000 0 152 242 NCBI RefSeq GCF_000389315.1-RS_2024_05_08 2024-05-08 4659 4400 94 23637636 GCF_000389335.1 PRJNA224116 SAMEA2272422 CARN00000000.1 na 1265630 28901 Salmonella enterica subsp. enterica serovar Agona str. 61.O.08 strain=61.O.08 na latest Scaffold Major Full 2013-04-30 61.O.08 ERI GCA_000389335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/335/GCF_000389335.1_61.O.08/ na na na haploid bacteria 4717515 4709846 52.000000 0 160 286 NCBI RefSeq GCF_000389335.1-RS_2025_08_15 2025-08-15 4680 4391 92 23637636 GCF_000389355.1 PRJNA224116 SAMEA2272262 CARM00000000.1 na 1265666 28901 Salmonella enterica subsp. enterica serovar Agona str. 62.H.72 strain=62.H.72 na latest Contig Major Full 2013-04-30 62.H.72 ERI GCA_000389355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/355/GCF_000389355.1_62.H.72/ na na na haploid bacteria 4734746 4734746 52.000000 0 195 195 NCBI RefSeq GCF_000389355.1-RS_2025_05_23 2025-05-23 4658 4418 79 23637636 GCF_000389375.1 PRJNA224116 SAMEA2272442 CARL00000000.1 na 1265619 28901 Salmonella enterica subsp. enterica serovar Agona str. 63.H.87 strain=63.H.87 na latest Contig Major Full 2013-04-30 63.H.87 ERI GCA_000389375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/375/GCF_000389375.1_63.H.87/ na na na haploid bacteria 4841487 4841487 52.000000 0 265 265 NCBI RefSeq GCF_000389375.1-RS_2025_03_20 2025-03-20 4809 4535 80 23637636 GCF_000389395.1 PRJNA224116 SAMEA2272159 CARK00000000.1 na 1265632 28901 Salmonella enterica subsp. enterica serovar Agona str. 64.H.00 strain=64.H.00 na latest Scaffold Major Full 2013-04-30 64.H.00 ERI GCA_000389395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/395/GCF_000389395.1_64.H.00/ na na na haploid bacteria 4772491 4770350 52.000000 0 169 188 NCBI RefSeq GCF_000389395.1-RS_2025_05_23 2025-05-23 4691 4454 96 23637636 GCF_000389415.1 PRJNA224116 SAMEA2272579 CARJ00000000.1 na 1265671 28901 Salmonella enterica subsp. enterica serovar Agona str. 65.H.72 strain=65.H.72 na latest Scaffold Major Full 2013-04-30 65.H.72 ERI GCA_000389415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/415/GCF_000389415.1_65.H.72/ na na na haploid bacteria 4829196 4828995 52.000000 0 206 208 NCBI RefSeq GCF_000389415.1-RS_2025_08_15 2025-08-15 4729 4497 91 23637636 GCF_000389435.1 PRJNA224116 SAMEA2272083 CARI00000000.1 na 1265634 28901 Salmonella enterica subsp. enterica serovar Agona str. 66.F.99 strain=66.F.99 na latest Scaffold Major Full 2013-04-30 66.F.99 ERI GCA_000389435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/435/GCF_000389435.1_66.F.99/ na na na haploid bacteria 4786700 4769834 52.000000 0 169 383 NCBI RefSeq GCF_000389435.1-RS_2025_08_15 2025-08-15 4747 4509 63 23637636 GCF_000389455.1 PRJNA224116 SAMEA2272350 CATS00000000.1 na 1265667 28901 Salmonella enterica subsp. enterica serovar Agona str. 67.H.09 strain=67.H.09 na latest Scaffold Major Full 2013-04-30 67.H.09 ERI GCA_000389455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/455/GCF_000389455.1_67.H.09/ na na na haploid bacteria 4803330 4801362 52.000000 0 167 185 NCBI RefSeq GCF_000389455.1-RS_2025_05_23 2025-05-23 4719 4459 92 23637636 GCF_000389475.1 PRJNA224116 SAMEA2272198 CARG00000000.1 na 1265620 28901 Salmonella enterica subsp. enterica serovar Agona str. 68.U.05 strain=68.U.05 na latest Scaffold Major Full 2013-04-30 68.U.05 ERI GCA_000389475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/475/GCF_000389475.1_68.U.05/ na na na haploid bacteria 4758793 4756140 52.000000 0 136 176 NCBI RefSeq GCF_000389475.1-RS_2025_09_21 2025-09-21 4672 4424 86 23637636 GCF_000389495.1 PRJNA224116 SAMEA2272722 CARF00000000.1 na 1265633 28901 Salmonella enterica subsp. enterica serovar Agona str. 69.H.06 strain=69.H.06 na latest Scaffold Major Full 2013-04-29 69.H.06 ERI GCA_000389495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/495/GCF_000389495.1_69.H.06/ na na na haploid bacteria 4822784 4816207 52.000000 0 181 277 NCBI RefSeq GCF_000389495.1-RS_2025_05_23 2025-05-23 4800 4529 87 23637636 GCF_000389515.1 PRJNA224116 SAMEA2272591 CARE00000000.1 na 1265672 28901 Salmonella enterica subsp. enterica serovar Agona str. 70.E.05 strain=70.E.05 na latest Scaffold Major Full 2013-04-29 70.E.05 ERI GCA_000389515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/515/GCF_000389515.1_70.E.05/ na na na haploid bacteria 4819182 4815199 52.000000 0 155 195 NCBI RefSeq GCF_000389515.1-RS_2025_05_23 2025-05-23 4734 4482 89 23637636 GCF_000389535.1 PRJNA224116 SAMEA2272009 CARD00000000.1 na 1265635 28901 Salmonella enterica subsp. enterica serovar Agona str. 71.E.05 strain=71.E.05 na latest Scaffold Major Full 2013-04-29 71.E.05 ERI GCA_000389535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/535/GCF_000389535.1_71.E.05/ na na na haploid bacteria 4728551 4725379 52.000000 0 154 186 NCBI RefSeq GCF_000389535.1-RS_2025_05_23 2025-05-23 4635 4390 90 23637636 GCF_000389555.1 PRJNA224116 SAMEA2272091 CARC00000000.1 na 1265674 28901 Salmonella enterica subsp. enterica serovar Agona str. 72.A.52 strain=72.A.52 na latest Scaffold Major Full 2013-04-29 72.A.52 ERI GCA_000389555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/555/GCF_000389555.1_72.A.52/ na na na haploid bacteria 4703884 4703689 52.000000 0 203 207 NCBI RefSeq GCF_000389555.1-RS_2025_08_15 2025-08-15 4602 4367 78 23637636 GCF_000389575.1 PRJNA224116 SAMEA2272203 CARB00000000.1 na 1265627 28901 Salmonella enterica subsp. enterica serovar Agona str. 73.H.09 strain=73.H.09 na latest Scaffold Major Full 2013-04-29 73.H.09 ERI GCA_000389575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/575/GCF_000389575.1_73.H.09/ na na na haploid bacteria 4760138 4757951 52.000000 0 138 157 NCBI RefSeq GCF_000389575.1-RS_2025_08_15 2025-08-15 4654 4424 80 23637636 GCF_000389595.1 PRJNA224116 SAMEA2272801 CAVM000000000.1 na 1306162 628 Xenorhabdus nematophila F1 strain=F1 na latest Scaffold Major Full 2013-04-29 XENF1_2627_PRJEB1529 INRA MONTPELLIER,FRANCE GCA_000389595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/595/GCF_000389595.1_XENF1_2627_PRJEB1529/ na na na haploid bacteria 4244676 4215676 43.500000 0 61 351 NCBI RefSeq GCF_000389595.1-RS_2026_02_08 2026-02-08 3913 3617 51 23788541 GCF_000389635.1 PRJNA224116 SAMN02602952 na na 86416 1501 Clostridium pasteurianum BC1 strain=BC1 na latest Complete Genome Major Full 2013-05-06 ASM38963v1 Brookhaven National Laboratory GCA_000389635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/635/GCF_000389635.1_ASM38963v1/ na na na haploid bacteria 5044100 5044100 30.500000 2 2 2 NCBI RefSeq GCF_000389635.1-RS_2025_06_05 2025-06-05 4945 4719 107 na GCF_000389675.2 PRJNA224116 SAMN02603216 na na 1314884 1579 Lactobacillus acidophilus La-14 strain=La-14 na latest Complete Genome Major Full 2013-06-21 ASM38967v2 DuPont GCA_000389675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/675/GCF_000389675.2_ASM38967v2/ na na na haploid bacteria 1991579 1991579 34.500000 1 1 1 NCBI RefSeq GCF_000389675.2-RS_2026_02_02 2026-02-02 1930 1784 76 23788546 GCF_000389715.1 PRJNA224116 SAMN02471027 APMY00000000.1 na 1273125 38312 Rhodococcus rhodnii LMG 5362 strain=LMG 5362 na latest Contig Major Full 2013-05-06 Rrhod1.0 Swansea University GCA_000389715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/715/GCF_000389715.1_Rrhod1.0/ na na na haploid bacteria 4383575 4383575 69.500000 0 134 134 NCBI RefSeq GCF_000389715.1-RS_2026_03_28 2026-03-28 4305 4128 57 23788540 GCF_000389755.1 PRJNA224116 SAMN02469608 ASAB00000000.1 na 1289594 29471 Pectobacterium atrosepticum CFBP 6276 strain=CFBP 6276 na latest Scaffold Major Full 2013-05-17 Pa6276v1.0 Institut des Sciences du vegetal GCA_000389755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/755/GCF_000389755.1_Pa6276v1.0/ na na na haploid bacteria 4869432 4868931 51.000000 2 4 9 NCBI RefSeq GCF_000389755.1-RS_2026_01_30 2026-01-30 4353 4178 103 23788545 GCF_000389805.1 PRJNA224116 SAMN02469696 AQPZ00000000.1 na 1229514 1229514 Cupriavidus sp. GA3-3 strain=GA3-3 na latest Scaffold Major Full 2013-05-15 GA3-3_1.0 CSIRO GCA_000389805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/805/GCF_000389805.1_GA3-3_1.0/ na na na haploid bacteria 6766178 6762223 66.500000 0 47 62 NCBI RefSeq GCF_000389805.1-RS_2024_08_22 2024-08-22 6314 6103 72 23833131 GCF_000389825.1 PRJNA224116 SAMN02469694 AQOU00000000.1 na 1286093 1286093 Pandoraea sp. SD6-2 strain=SD6-2 na latest Scaffold Major Full 2013-05-15 SD6-2_1.0 CSIRO GCA_000389825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/825/GCF_000389825.1_SD6-2_1.0/ na na na haploid bacteria 5772015 5768247 62.500000 0 37 51 NCBI RefSeq GCF_000389825.1-RS_2024_08_22 2024-08-22 5288 5106 78 23833132 GCF_000389965.1 PRJNA224116 SAMN02603860 na na 649831 649831 Actinoplanes sp. N902-109 strain=N902-109 na latest Complete Genome Major Full 2013-05-08 ASM38996v1 Shanghai Institute of Pharmaceutical Industry GCA_000389965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/965/GCF_000389965.1_ASM38996v1/ na na na haploid bacteria 9228054 9228054 71.500000 1 1 1 NCBI RefSeq GCF_000389965.1-RS_2024_08_13 2024-08-13 8134 7941 75 na GCF_000389985.1 PRJNA224116 SAMN02470782 ASEP00000000.1 na 110319 110319 Nocardioides sp. CF8 strain=CF8 na latest Chromosome Major Full 2013-08-29 1.0 Oregon State University GCA_000389985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/389/985/GCF_000389985.1_1.0/ na na na haploid bacteria 4219246 4204777 70.000000 1 1 165 NCBI RefSeq GCF_000389985.1-RS_2025_08_25 2025-08-25 4231 4108 51 23833136 GCF_000390005.2 PRJNA224116 SAMN02221896 AOUR00000000.2 na 1299319 303 Pseudomonas putida LF54 strain=Pseudomonas, /breed=putida na latest Scaffold Major Full 2013-09-18 ASM39000v2 University of Tsukuba GCA_000390005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/005/GCF_000390005.2_ASM39000v2/ na na na haploid bacteria 5625016 5622691 61.500000 0 180 210 NCBI RefSeq GCF_000390005.2-RS_2025_02_11 2025-02-11 5358 5081 103 23603683 GCF_000390025.1 PRJNA224116 SAMN02470574 AQPW00000000.1 na 1316928 2055 Gordonia terrae C-6 strain=C-6 na latest Contig Major Full 2013-05-08 C-6 Nankai University GCA_000390025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/025/GCF_000390025.1_C-6/ na na na haploid bacteria 5170241 5170241 68.000000 0 130 130 NCBI RefSeq GCF_000390025.1-RS_2025_04_26 2025-04-26 4719 4593 53 23788548 GCF_000390085.1 PRJNA224116 SAMN02603716 na na 1199187 1764 Mycobacterium avium subsp. paratuberculosis MAP4 strain=MAP4 na latest Complete Genome Major Full 2013-05-09 ASM39008v1 Penn State University GCA_000390085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/085/GCF_000390085.1_ASM39008v1/ na na na haploid bacteria 4829424 4829424 69.500000 1 1 1 NCBI RefSeq GCF_000390085.1-RS_2026_01_23 2026-01-23 4576 4314 53 24503996 GCF_000390125.1 PRJNA224116 SAMN02470997 ASAH00000000.1 na 1269941 688 Aliivibrio logei ATCC 35077 strain=ATCC 35077 na latest Contig Major Full 2013-05-10 Whole genome shotgun assembly Smithsonian Institution GCA_000390125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/125/GCF_000390125.1_Whole_genome_shotgun_assembly/ na na na haploid bacteria 5288113 5288113 39.000000 0 52 52 NCBI RefSeq GCF_000390125.1-RS_2025_07_24 2025-07-24 4829 4653 94 na GCF_000390185.1 PRJNA224116 SAMN02470014 AQHR00000000.1 reference genome 1232681 1232681 Lunatimonas lonarensis strain=AK24 na latest Contig Major Full 2013-05-10 Lulo1 Institute of Microbial Technology GCA_000390185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/185/GCF_000390185.1_Lulo1/ na assembly from type material na haploid bacteria 5392044 5392044 47.000000 0 128 128 NCBI RefSeq GCF_000390185.1-RS_2025_11_22 2025-11-22 4386 4317 45 na GCF_000390205.1 PRJNA224116 SAMN02470878 ARXY00000000.1 na 1216363 1280 Staphylococcus aureus subsp. aureus 06BA18369 strain=06BA18369 na latest Contig Major Full 2013-05-10 MSSA1.0 Northern Antibiotic Resistance Partnership GCA_000390205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/205/GCF_000390205.1_MSSA1.0/ na na na haploid bacteria 2865757 2865757 32.500000 0 59 59 NCBI RefSeq GCF_000390205.1-RS_2025_04_19 2025-04-19 2955 2784 67 23814031 GCF_000390225.1 PRJNA224116 SAMN02470879 APMZ00000000.1 na 1210041 1314 Streptococcus pyogenes 06BA18369 strain=06BA18369 na latest Contig Major Full 2013-05-10 GAS1.0 Northern Antibiotic Resistance Partnership GCA_000390225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/225/GCF_000390225.1_GAS1.0/ na na na haploid bacteria 1813404 1813404 38.500000 0 47 47 NCBI RefSeq GCF_000390225.1-RS_2025_04_15 2025-04-15 1825 1722 37 23814030 GCF_000390245.1 PRJNA224116 SAMN02603120 na na 1276647 1307 Streptococcus suis TL13 strain=TL13 na latest Complete Genome Major Full 2013-05-13 ASM39024v1 China animal health and epidemiology center GCA_000390245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/245/GCF_000390245.1_ASM39024v1/ na na na haploid bacteria 2038146 2038146 41.500000 1 1 1 NCBI RefSeq GCF_000390245.1-RS_2026_02_02 2026-02-02 2012 1877 72 23814033 GCF_000390265.1 PRJNA224116 SAMN01919351 na na 243274 2336 Thermotoga maritima MSB8 strain=MSB8 na latest Complete Genome Major Full 2013-05-13 ASM39026v1 University of California San Diego GCA_000390265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/265/GCF_000390265.1_ASM39026v1/ na assembly from type material na haploid bacteria 1869612 1869612 46.000000 1 1 1 NCBI RefSeq GCF_000390265.1-RS_2026_03_31 2026-03-31 1922 1859 52 23637642 GCF_000390465.1 PRJNA224116 SAMN00779805 AHWU00000000.1 na 1138893 1352 Enterococcus faecium EnGen0006 strain=EnGen0006 na latest Scaffold Major Full 2013-05-14 Ente_faec_E1293_V1 Broad Institute GCA_000390465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/465/GCF_000390465.1_Ente_faec_E1293_V1/ na na na haploid bacteria 2868637 2836532 38.000000 0 18 46 NCBI RefSeq GCF_000390465.1-RS_2026_03_15 2026-03-15 2798 2609 79 na GCF_000390485.1 PRJNA224116 SAMN00779838 AHXY00000000.1 na 1138923 1352 Enterococcus faecium EnGen0041 strain=EnGen0041 na latest Scaffold Major Full 2013-05-14 Ente_faec_E2966_V1 Broad Institute GCA_000390485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/485/GCF_000390485.1_Ente_faec_E2966_V1/ na na na haploid bacteria 2797777 2768007 38.000000 0 31 53 NCBI RefSeq GCF_000390485.1-RS_2026_03_15 2026-03-15 2720 2584 65 na GCF_000390505.1 PRJNA224116 SAMN00792299 AIIK00000000.1 na 1151186 1351 Enterococcus faecalis EnGen0065 strain=B15725 na latest Scaffold Major Full 2013-05-14 Ente_faec_B15725_V1 Broad Institute GCA_000390505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/505/GCF_000390505.1_Ente_faec_B15725_V1/ na na na haploid bacteria 3330634 3324573 37.500000 0 33 42 NCBI RefSeq GCF_000390505.1-RS_2026_01_22 2026-01-22 3346 3169 84 na GCF_000390525.1 PRJNA224116 SAMN00792310 AIIL00000000.1 na 1151187 1351 Enterococcus faecalis EnGen0062 strain=B16457 na latest Scaffold Major Full 2013-05-13 Ente_faec_B16457_V1 Broad Institute GCA_000390525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/525/GCF_000390525.1_Ente_faec_B16457_V1/ na na na haploid bacteria 3003775 2994841 37.500000 0 3 15 NCBI RefSeq GCF_000390525.1-RS_2026_01_11 2026-01-11 2945 2786 80 na GCF_000390545.1 PRJNA224116 SAMN00792319 AIIM00000000.1 na 1151188 1351 Enterococcus faecalis EnGen0061 strain=B56765 na latest Scaffold Major Full 2013-05-14 Ente_faec_B56765_V1 Broad Institute GCA_000390545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/545/GCF_000390545.1_Ente_faec_B56765_V1/ na na na haploid bacteria 3348334 3334004 37.000000 0 33 49 NCBI RefSeq GCF_000390545.1-RS_2026_01_22 2026-01-22 3413 3237 87 na GCF_000390565.1 PRJNA224116 SAMN00792320 AIIN00000000.1 na 1151189 1351 Enterococcus faecalis EnGen0064 strain=B69486 na latest Scaffold Major Full 2013-05-14 Ente_faec_B69486_V1 Broad Institute GCA_000390565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/565/GCF_000390565.1_Ente_faec_B69486_V1/ na na na haploid bacteria 3409096 3344132 37.500000 0 14 51 NCBI RefSeq GCF_000390565.1-RS_2026_01_22 2026-01-22 3405 3209 100 na GCF_000390585.1 PRJNA224116 SAMN00792321 AIIO00000000.1 na 1151190 1351 Enterococcus faecalis EnGen0066 strain=B84847 na latest Scaffold Major Full 2013-05-13 Ente_faec_B84847_V1 Broad Institute GCA_000390585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/585/GCF_000390585.1_Ente_faec_B84847_V1/ na na na haploid bacteria 2892356 2889635 37.500000 0 4 11 NCBI RefSeq GCF_000390585.1-RS_2026_01_11 2026-01-11 2830 2700 68 na GCF_000390605.1 PRJNA224116 SAMN00792322 AIIP00000000.1 na 1151191 1351 Enterococcus faecalis EnGen0063 strain=C19315WT na latest Scaffold Major Full 2013-05-14 Ente_faec_C_19315_led_1A_WT_V1 Broad Institute GCA_000390605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/605/GCF_000390605.1_Ente_faec_C_19315_led_1A_WT_V1/ na na na haploid bacteria 3209722 3189613 37.000000 0 10 27 NCBI RefSeq GCF_000390605.1-RS_2026_01_20 2026-01-20 3108 2943 89 na GCF_000390625.1 PRJNA224116 SAMN00792323 AIIQ00000000.1 na 1151192 1351 Enterococcus faecalis EnGen0059 strain=C 19315 led 1b pp (SCV) na latest Scaffold Major Full 2013-05-14 Ente_faec_C_19315_led_1b_pp_SCV_V1 Broad Institute GCA_000390625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/625/GCF_000390625.1_Ente_faec_C_19315_led_1b_pp_SCV_V1/ na na na haploid bacteria 3200324 3189828 37.000000 0 11 23 NCBI RefSeq GCF_000390625.1-RS_2026_01_20 2026-01-20 3089 2945 72 na GCF_000390645.1 PRJNA224116 SAMN00792324 AIIR00000000.1 na 1151193 1351 Enterococcus faecalis EnGen0076 strain=1448E03 na latest Scaffold Major Full 2013-05-14 Ente_faec_1448E03_V1 Broad Institute GCA_000390645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/645/GCF_000390645.1_Ente_faec_1448E03_V1/ na na na haploid bacteria 2903647 2884973 37.500000 0 6 31 NCBI RefSeq GCF_000390645.1-RS_2026_01_11 2026-01-11 2799 2660 79 na GCF_000390665.1 PRJNA224116 SAMN00792325 AIIS00000000.1 na 1151194 1351 Enterococcus faecalis EnGen0074 strain=182970 na latest Scaffold Major Full 2013-05-14 Ente_faec_182970_V1 Broad Institute GCA_000390665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/665/GCF_000390665.1_Ente_faec_182970_V1/ na na na haploid bacteria 3024809 3015318 37.500000 0 14 26 NCBI RefSeq GCF_000390665.1-RS_2026_01_11 2026-01-11 2934 2815 73 na GCF_000390685.1 PRJNA224116 SAMN00792300 AIIT00000000.1 na 1151195 1351 Enterococcus faecalis EnGen0075 strain=19116 na latest Scaffold Major Full 2013-05-14 Ente_faec_19116_V1 Broad Institute GCA_000390685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/685/GCF_000390685.1_Ente_faec_19116_V1/ na na na haploid bacteria 2954490 2947263 37.500000 0 5 20 NCBI RefSeq GCF_000390685.1-RS_2026_01_11 2026-01-11 2877 2762 60 na GCF_000390705.1 PRJNA224116 SAMN00792301 AIIU00000000.1 na 1151196 1351 Enterococcus faecalis EnGen0058 strain=2630V05 na latest Scaffold Major Full 2013-05-14 Ente_faec_2630V05_V1 Broad Institute GCA_000390705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/705/GCF_000390705.1_Ente_faec_2630V05_V1/ na na na haploid bacteria 3063175 3051828 37.500000 0 17 30 NCBI RefSeq GCF_000390705.1-RS_2026_01_11 2026-01-11 2980 2853 78 na GCF_000390725.1 PRJNA224116 SAMN00792302 AIIV00000000.1 na 1151197 1351 Enterococcus faecalis EnGen0073 strain=2924 na latest Scaffold Major Full 2013-05-14 Ente_faec_2924_V1 Broad Institute GCA_000390725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/725/GCF_000390725.1_Ente_faec_2924_V1/ na na na haploid bacteria 2970811 2964117 37.500000 0 11 21 NCBI RefSeq GCF_000390725.1-RS_2026_01_11 2026-01-11 2863 2769 51 na GCF_000390745.1 PRJNA224116 SAMN00792303 AIIW00000000.1 na 1151198 1351 Enterococcus faecalis EnGen0078 strain=7330082-2 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330082-2_V1 Broad Institute GCA_000390745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/745/GCF_000390745.1_Ente_faec_7330082-2_V1/ na na na haploid bacteria 2973355 2960576 37.500000 0 10 27 NCBI RefSeq GCF_000390745.1-RS_2026_01_11 2026-01-11 2895 2774 80 na GCF_000390765.1 PRJNA224116 SAMN00792304 AIIX00000000.1 na 1151199 1351 Enterococcus faecalis EnGen0080 strain=7330112-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330112-3_V1 Broad Institute GCA_000390765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/765/GCF_000390765.1_Ente_faec_7330112-3_V1/ na na na haploid bacteria 3073482 3060207 37.000000 0 19 39 NCBI RefSeq GCF_000390765.1-RS_2026_01_11 2026-01-11 2999 2877 66 na GCF_000390785.1 PRJNA224116 SAMN00792305 AIIY00000000.1 na 1151200 1351 Enterococcus faecalis EnGen0079 strain=7330245-2 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330245-2_V1 Broad Institute GCA_000390785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/785/GCF_000390785.1_Ente_faec_7330245-2_V1/ na na na haploid bacteria 3087572 3076404 37.500000 0 14 30 NCBI RefSeq GCF_000390785.1-RS_2025_08_05 2025-08-05 3043 2926 77 na GCF_000390805.1 PRJNA224116 SAMN00792306 AIIZ00000000.1 na 1151201 1351 Enterococcus faecalis EnGen0060 strain=7330257-1 na latest Scaffold Major Full 2013-05-13 Ente_faec_7330257-1_V1 Broad Institute GCA_000390805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/805/GCF_000390805.1_Ente_faec_7330257-1_V1/ na na na haploid bacteria 2922758 2914167 37.500000 0 4 20 NCBI RefSeq GCF_000390805.1-RS_2026_01_11 2026-01-11 2849 2734 68 na GCF_000390825.1 PRJNA224116 SAMN00792307 AIJA00000000.1 na 1151202 1351 Enterococcus faecalis EnGen0081 strain=7330259-5 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330259-5_V1 Broad Institute GCA_000390825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/825/GCF_000390825.1_Ente_faec_7330259-5_V1/ na na na haploid bacteria 2992890 2982912 37.500000 0 8 25 NCBI RefSeq GCF_000390825.1-RS_2026_01_11 2026-01-11 2923 2795 70 na GCF_000390845.1 PRJNA224116 SAMN00792309 AIJC00000000.1 na 1151204 1351 Enterococcus faecalis EnGen0082 strain=7330948-5 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330948-5_V1 Broad Institute GCA_000390845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/845/GCF_000390845.1_Ente_faec_7330948-5_V1/ na na na haploid bacteria 2910983 2893646 37.500000 0 7 23 NCBI RefSeq GCF_000390845.1-RS_2026_01_11 2026-01-11 2791 2654 79 na GCF_000390865.1 PRJNA224116 SAMN00792311 AIJD00000000.1 na 1151205 1351 Enterococcus faecalis EnGen0083 strain=7430275-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7430275-3_V1 Broad Institute GCA_000390865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/865/GCF_000390865.1_Ente_faec_7430275-3_V1/ na na na haploid bacteria 2904550 2890734 37.500000 0 6 22 NCBI RefSeq GCF_000390865.1-RS_2026_01_11 2026-01-11 2814 2698 61 na GCF_000390885.1 PRJNA224116 SAMN00792312 AIJE00000000.1 na 1151206 1351 Enterococcus faecalis EnGen0084 strain=7430315-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7430315-3_V1 Broad Institute GCA_000390885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/885/GCF_000390885.1_Ente_faec_7430315-3_V1/ na na na haploid bacteria 2791556 2780021 37.500000 0 4 25 NCBI RefSeq GCF_000390885.1-RS_2026_01_20 2026-01-20 2668 2552 72 na GCF_000390905.1 PRJNA224116 SAMN00792313 AIJF00000000.1 na 1151207 1351 Enterococcus faecalis EnGen0071 strain=7430416-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7430416-3_V1 Broad Institute GCA_000390905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/905/GCF_000390905.1_Ente_faec_7430416-3_V1/ na na na haploid bacteria 2924859 2917629 37.500000 0 6 20 NCBI RefSeq GCF_000390905.1-RS_2026_01_11 2026-01-11 2837 2687 99 na GCF_000390925.1 PRJNA224116 SAMN00792314 AIJG00000000.1 na 1151208 1351 Enterococcus faecalis EnGen0072 strain=7430821-4 na latest Scaffold Major Full 2013-05-14 Ente_faec_7430821-4_V1 Broad Institute GCA_000390925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/925/GCF_000390925.1_Ente_faec_7430821-4_V1/ na na na haploid bacteria 2912152 2896074 37.500000 0 7 25 NCBI RefSeq GCF_000390925.1-RS_2026_01_11 2026-01-11 2827 2705 64 na GCF_000390945.1 PRJNA224116 SAMN00792315 AIJH00000000.1 na 1151209 1351 Enterococcus faecalis EnGen0067 strain=B1290 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1290_V1 Broad Institute GCA_000390945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/945/GCF_000390945.1_Ente_faec_B1290_V1/ na na na haploid bacteria 3336149 3320847 37.000000 0 39 58 NCBI RefSeq GCF_000390945.1-RS_2026_01_22 2026-01-22 3370 3211 83 na GCF_000390965.1 PRJNA224116 SAMN00792316 AIJI00000000.1 na 1151210 1351 Enterococcus faecalis EnGen0068 strain=B1327 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1327_V1 Broad Institute GCA_000390965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/965/GCF_000390965.1_Ente_faec_B1327_V1/ na na na haploid bacteria 3269169 3253281 37.000000 0 12 31 NCBI RefSeq GCF_000390965.1-RS_2026_01_20 2026-01-20 3272 3126 84 na GCF_000390985.1 PRJNA224116 SAMN00792317 AIJJ00000000.1 na 1151211 1351 Enterococcus faecalis EnGen0069 strain=B1376 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1376_V1 Broad Institute GCA_000390985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/390/985/GCF_000390985.1_Ente_faec_B1376_V1/ na na na haploid bacteria 3329384 3319534 37.000000 0 32 48 NCBI RefSeq GCF_000390985.1-RS_2026_01_22 2026-01-22 3334 3189 77 na GCF_000391005.1 PRJNA224116 SAMN00792318 AIJK00000000.1 na 1151212 1351 Enterococcus faecalis EnGen0070 strain=B1385 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1385_V1 Broad Institute GCA_000391005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/005/GCF_000391005.1_Ente_faec_B1385_V1/ na na na haploid bacteria 3273104 3258356 37.000000 0 23 37 NCBI RefSeq GCF_000391005.1-RS_2026_01_20 2026-01-20 3275 3119 90 na GCF_000391025.1 PRJNA224116 SAMN00808868 AIPV00000000.1 na 1157342 1351 Enterococcus faecalis EnGen0106 strain=B1441 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1441_V1 Broad Institute GCA_000391025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/025/GCF_000391025.1_Ente_faec_B1441_V1/ na na na haploid bacteria 3276422 3256732 37.000000 0 22 37 NCBI RefSeq GCF_000391025.1-RS_2026_01_20 2026-01-20 3273 3122 88 na GCF_000391045.1 PRJNA224116 SAMN00808924 AIPW00000000.1 na 1157343 1351 Enterococcus faecalis EnGen0088 strain=B1505 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1505_V1 Broad Institute GCA_000391045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/045/GCF_000391045.1_Ente_faec_B1505_V1/ na na na haploid bacteria 3339641 3312831 37.000000 0 7 26 NCBI RefSeq GCF_000391045.1-RS_2026_01_22 2026-01-22 3328 3177 83 na GCF_000391065.1 PRJNA224116 SAMN00808935 AIPX00000000.1 na 1157344 1351 Enterococcus faecalis EnGen0120 strain=B1532 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1532_V1 Broad Institute GCA_000391065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/065/GCF_000391065.1_Ente_faec_B1532_V1/ na na na haploid bacteria 3226364 3212843 37.000000 0 37 56 NCBI RefSeq GCF_000391065.1-RS_2026_01_20 2026-01-20 3250 3103 69 na GCF_000391085.1 PRJNA224116 SAMN00808946 AIPY00000000.1 na 1157345 1351 Enterococcus faecalis EnGen0089 strain=B1586 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1586_V1 Broad Institute GCA_000391085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/085/GCF_000391085.1_Ente_faec_B1586_V1/ na na na haploid bacteria 3301555 3270582 37.000000 0 4 30 NCBI RefSeq GCF_000391085.1-RS_2026_01_20 2026-01-20 3289 3144 73 na GCF_000391105.1 PRJNA224116 SAMN00808957 AIPZ00000000.1 na 1157346 1351 Enterococcus faecalis EnGen0090 strain=B1618 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1618_V1 Broad Institute GCA_000391105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/105/GCF_000391105.1_Ente_faec_B1618_V1/ na na na haploid bacteria 3273772 3265587 37.000000 0 15 26 NCBI RefSeq GCF_000391105.1-RS_2026_01_20 2026-01-20 3265 3117 84 na GCF_000391125.1 PRJNA224116 SAMN00808968 AIQA00000000.1 na 1157347 1351 Enterococcus faecalis EnGen0109 strain=B1623 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1623_V1 Broad Institute GCA_000391125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/125/GCF_000391125.1_Ente_faec_B1623_V1/ na na na haploid bacteria 3322398 3301162 37.000000 0 53 72 NCBI RefSeq GCF_000391125.1-RS_2026_01_22 2026-01-22 3336 3189 64 na GCF_000391145.1 PRJNA224116 SAMN00808979 AIQB00000000.1 na 1157348 1351 Enterococcus faecalis EnGen0110 strain=B1678 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1678_V1 Broad Institute GCA_000391145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/145/GCF_000391145.1_Ente_faec_B1678_V1/ na na na haploid bacteria 3293399 3275396 37.000000 0 41 59 NCBI RefSeq GCF_000391145.1-RS_2026_01_20 2026-01-20 3301 3147 84 na GCF_000391165.1 PRJNA224116 SAMN00808990 AIQC00000000.1 na 1157349 1351 Enterococcus faecalis EnGen0091 strain=B1696 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1696_V1 Broad Institute GCA_000391165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/165/GCF_000391165.1_Ente_faec_B1696_V1/ na na na haploid bacteria 3341893 3307742 37.000000 0 9 37 NCBI RefSeq GCF_000391165.1-RS_2026_01_22 2026-01-22 3338 3179 88 na GCF_000391185.1 PRJNA224116 SAMN00809001 AIQD00000000.1 na 1157350 1351 Enterococcus faecalis EnGen0092 strain=B1719 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1719_V1 Broad Institute GCA_000391185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/185/GCF_000391185.1_Ente_faec_B1719_V1/ na na na haploid bacteria 3323620 3305629 37.000000 0 24 39 NCBI RefSeq GCF_000391185.1-RS_2026_01_22 2026-01-22 3325 3172 86 na GCF_000391205.1 PRJNA224116 SAMN00808869 AIQE00000000.1 na 1157351 1351 Enterococcus faecalis EnGen0085 strain=B1734 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1734_V1 Broad Institute GCA_000391205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/205/GCF_000391205.1_Ente_faec_B1734_V1/ na na na haploid bacteria 3323281 3302625 37.000000 0 32 49 NCBI RefSeq GCF_000391205.1-RS_2026_01_22 2026-01-22 3335 3205 57 na GCF_000391225.1 PRJNA224116 SAMN00808880 AIQF00000000.1 na 1157352 1351 Enterococcus faecalis EnGen0111 strain=B1843 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1843_V1 Broad Institute GCA_000391225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/225/GCF_000391225.1_Ente_faec_B1843_V1/ na na na haploid bacteria 3298567 3281724 37.000000 0 36 47 NCBI RefSeq GCF_000391225.1-RS_2026_01_20 2026-01-20 3288 3138 77 na GCF_000391245.1 PRJNA224116 SAMN00808891 AIQH00000000.1 na 1157353 1351 Enterococcus faecalis EnGen0119 strain=B1874 na latest Scaffold Major Full 2013-05-14 Ente_faec_B1874_V1 Broad Institute GCA_000391245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/245/GCF_000391245.1_Ente_faec_B1874_V1/ na na na haploid bacteria 3321978 3297894 37.000000 0 19 33 NCBI RefSeq GCF_000391245.1-RS_2026_01_21 2026-01-21 3306 3174 67 na GCF_000391265.1 PRJNA224116 SAMN00808902 AIQL00000000.1 na 1157354 1351 Enterococcus faecalis EnGen0093 strain=B2207 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2207_V1 Broad Institute GCA_000391265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/265/GCF_000391265.1_Ente_faec_B2207_V1/ na na na haploid bacteria 2923732 2917773 37.000000 0 14 21 NCBI RefSeq GCF_000391265.1-RS_2026_01_12 2026-01-12 2821 2722 62 na GCF_000391285.1 PRJNA224116 SAMN00808913 AIQN00000000.1 na 1157355 1351 Enterococcus faecalis EnGen0094 strain=B2255 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2255_V1 Broad Institute GCA_000391285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/285/GCF_000391285.1_Ente_faec_B2255_V1/ na na na haploid bacteria 3324121 3298906 37.000000 0 12 32 NCBI RefSeq GCF_000391285.1-RS_2026_01_21 2026-01-21 3321 3184 73 na GCF_000391305.1 PRJNA224116 SAMN00808919 AIQP00000000.1 na 1157356 1351 Enterococcus faecalis EnGen0095 strain=B2391 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2391_V1 Broad Institute GCA_000391305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/305/GCF_000391305.1_Ente_faec_B2391_V1/ na na na haploid bacteria 3323497 3309779 37.000000 0 9 32 NCBI RefSeq GCF_000391305.1-RS_2026_01_22 2026-01-22 3340 3190 78 na GCF_000391325.1 PRJNA224116 SAMN00808920 AIQQ00000000.1 na 1157357 1351 Enterococcus faecalis EnGen0096 strain=B2488 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2488_V1 Broad Institute GCA_000391325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/325/GCF_000391325.1_Ente_faec_B2488_V1/ na na na haploid bacteria 3345852 3332692 37.000000 0 11 25 NCBI RefSeq GCF_000391325.1-RS_2026_01_22 2026-01-22 3346 3195 79 na GCF_000391345.1 PRJNA224116 SAMN00808921 AIQR00000000.1 na 1157358 1351 Enterococcus faecalis EnGen0097 strain=B2535 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2535_V1 Broad Institute GCA_000391345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/345/GCF_000391345.1_Ente_faec_B2535_V1/ na na na haploid bacteria 3406708 3388234 37.000000 0 18 39 NCBI RefSeq GCF_000391345.1-RS_2026_01_22 2026-01-22 3420 3260 83 na GCF_000391365.1 PRJNA224116 SAMN00808922 AIQS00000000.1 na 1157359 1351 Enterococcus faecalis EnGen0112 strain=B2557 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2557_V1 Broad Institute GCA_000391365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/365/GCF_000391365.1_Ente_faec_B2557_V1/ na na na haploid bacteria 3376762 3358521 37.000000 0 27 44 NCBI RefSeq GCF_000391365.1-RS_2026_01_22 2026-01-22 3373 3217 82 na GCF_000391385.1 PRJNA224116 SAMN00808923 AIQT00000000.1 na 1157360 1351 Enterococcus faecalis EnGen0098 strain=B2593 na latest Scaffold Major Full 2013-05-14 Ente_faec_B2593_V1 Broad Institute GCA_000391385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/385/GCF_000391385.1_Ente_faec_B2593_V1/ na na na haploid bacteria 3355288 3301904 37.000000 0 9 33 NCBI RefSeq GCF_000391385.1-RS_2026_01_22 2026-01-22 3339 3190 79 na GCF_000391405.1 PRJNA224116 SAMN00808925 AIRC00000000.1 na 1157361 1351 Enterococcus faecalis EnGen0099 strain=B3031 na latest Scaffold Major Full 2013-05-14 Ente_faec_B3031_V1 Broad Institute GCA_000391405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/405/GCF_000391405.1_Ente_faec_B3031_V1/ na na na haploid bacteria 3263174 3251582 37.000000 0 39 57 NCBI RefSeq GCF_000391405.1-RS_2026_01_20 2026-01-20 3277 3142 65 na GCF_000391425.1 PRJNA224116 SAMN00808926 AIRD00000000.1 na 1157362 1351 Enterococcus faecalis EnGen0113 strain=B3042 na latest Scaffold Major Full 2013-05-14 Ente_faec_B3042_V1 Broad Institute GCA_000391425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/425/GCF_000391425.1_Ente_faec_B3042_V1/ na na na haploid bacteria 3233655 3212742 37.000000 0 44 63 NCBI RefSeq GCF_000391425.1-RS_2026_01_20 2026-01-20 3237 3068 88 na GCF_000391445.1 PRJNA224116 SAMN00808927 AIRE00000000.1 na 1157363 1351 Enterococcus faecalis EnGen0114 strain=B3053 na latest Scaffold Major Full 2013-05-14 Ente_faec_B3053_V1 Broad Institute GCA_000391445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/445/GCF_000391445.1_Ente_faec_B3053_V1/ na na na haploid bacteria 3313863 3302748 37.000000 0 22 39 NCBI RefSeq GCF_000391445.1-RS_2026_01_22 2026-01-22 3331 3193 70 na GCF_000391465.1 PRJNA224116 SAMN00808928 AIRG00000000.1 na 1157364 1351 Enterococcus faecalis EnGen0100 strain=B3126 na latest Scaffold Major Full 2013-05-14 Ente_faec_B3126_V1 Broad Institute GCA_000391465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/465/GCF_000391465.1_Ente_faec_B3126_V1/ na na na haploid bacteria 3317107 3303651 37.000000 0 22 38 NCBI RefSeq GCF_000391465.1-RS_2026_01_22 2026-01-22 3314 3178 72 na GCF_000391485.2 PRJNA224116 SAMN00808929 na na 1157365 1351 Enterococcus faecalis EnGen0107 strain=B594 na latest Complete Genome Major Full 2019-07-30 ASM39148v2 Broad Institute GCA_000391485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/485/GCF_000391485.2_ASM39148v2/ na na na haploid bacteria 3267721 3267721 37.000000 3 3 3 NCBI RefSeq GCF_000391485.2-RS_2026_03_14 2026-03-14 3262 3117 82 30971455 GCF_000391505.1 PRJNA224116 SAMN00808930 AIRZ00000000.1 na 1157366 1351 Enterococcus faecalis EnGen0087 strain=B878 na latest Scaffold Major Full 2013-05-14 Ente_faec_B878_V1 Broad Institute GCA_000391505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/505/GCF_000391505.1_Ente_faec_B878_V1/ na na na haploid bacteria 3333754 3321579 37.000000 0 30 47 NCBI RefSeq GCF_000391505.1-RS_2026_01_22 2026-01-22 3352 3224 55 na GCF_000391525.1 PRJNA224116 SAMN00808931 AISA00000000.1 na 1157367 1351 Enterococcus faecalis EnGen0108 strain=B939 na latest Scaffold Major Full 2013-05-14 Ente_faec_B939_V1 Broad Institute GCA_000391525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/525/GCF_000391525.1_Ente_faec_B939_V1/ na na na haploid bacteria 3317780 3307316 37.000000 0 37 48 NCBI RefSeq GCF_000391525.1-RS_2026_01_22 2026-01-22 3329 3184 77 na GCF_000391545.1 PRJNA224116 SAMN00808932 AISB00000000.1 na 1157368 1351 Enterococcus faecalis EnGen0086 strain=HEF39 na latest Scaffold Major Full 2013-05-14 Ente_faec_HEF39_V1 Broad Institute GCA_000391545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/545/GCF_000391545.1_Ente_faec_HEF39_V1/ na na na haploid bacteria 2969756 2938220 37.500000 0 10 34 NCBI RefSeq GCF_000391545.1-RS_2026_01_12 2026-01-12 2884 2736 78 na GCF_000391565.1 PRJNA224116 SAMN00808933 AISC00000000.1 na 1157369 1351 Enterococcus faecalis EnGen0115 strain=UAA769 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA769_V1 Broad Institute GCA_000391565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/565/GCF_000391565.1_Ente_faec_UAA769_V1/ na na na haploid bacteria 3077045 3062913 37.500000 0 10 24 NCBI RefSeq GCF_000391565.1-RS_2026_01_12 2026-01-12 3082 2953 81 na GCF_000391585.1 PRJNA224116 SAMN00808934 AISD00000000.1 na 1157370 1351 Enterococcus faecalis EnGen0101 strain=UAA823 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA823_V1 Broad Institute GCA_000391585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/585/GCF_000391585.1_Ente_faec_UAA823_V1/ na na na haploid bacteria 3365816 3335622 37.000000 0 26 55 NCBI RefSeq GCF_000391585.1-RS_2026_01_22 2026-01-22 3348 3168 78 na GCF_000391605.1 PRJNA224116 SAMN00808936 AISE00000000.1 na 1157371 1351 Enterococcus faecalis EnGen0102 strain=UAA902 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA902_V1 Broad Institute GCA_000391605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/605/GCF_000391605.1_Ente_faec_UAA902_V1/ na na na haploid bacteria 2904924 2900989 37.500000 0 9 22 NCBI RefSeq GCF_000391605.1-RS_2026_01_12 2026-01-12 2813 2690 81 na GCF_000391625.1 PRJNA224116 SAMN00808937 AISF00000000.1 na 1157372 1351 Enterococcus faecalis EnGen0103 strain=UAA903 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA903_V1 Broad Institute GCA_000391625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/625/GCF_000391625.1_Ente_faec_UAA903_V1/ na na na haploid bacteria 2917878 2912586 37.500000 0 9 18 NCBI RefSeq GCF_000391625.1-RS_2026_01_12 2026-01-12 2821 2693 92 na GCF_000391645.1 PRJNA224116 SAMN00808938 AISG00000000.1 na 1157373 1351 Enterococcus faecalis EnGen0104 strain=UAA904 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA904_V1 Broad Institute GCA_000391645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/645/GCF_000391645.1_Ente_faec_UAA904_V1/ na na na haploid bacteria 2901829 2894653 37.500000 0 8 18 NCBI RefSeq GCF_000391645.1-RS_2026_01_12 2026-01-12 2809 2695 79 na GCF_000391665.1 PRJNA224116 SAMN00808939 AISH00000000.1 na 1157374 1351 Enterococcus faecalis EnGen0105 strain=UAA905 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA905_V1 Broad Institute GCA_000391665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/665/GCF_000391665.1_Ente_faec_UAA905_V1/ na na na haploid bacteria 2904349 2894734 37.500000 0 9 19 NCBI RefSeq GCF_000391665.1-RS_2026_01_12 2026-01-12 2811 2687 85 na GCF_000391685.1 PRJNA224116 SAMN00808940 AISI00000000.1 na 1157375 1351 Enterococcus faecalis EnGen0116 strain=UAA906 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA906_V1 Broad Institute GCA_000391685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/685/GCF_000391685.1_Ente_faec_UAA906_V1/ na na na haploid bacteria 2872691 2868392 37.500000 0 8 16 NCBI RefSeq GCF_000391685.1-RS_2026_01_12 2026-01-12 2771 2667 70 na GCF_000391705.1 PRJNA224116 SAMN00808941 AISJ00000000.1 na 1157376 1351 Enterococcus faecalis EnGen0117 strain=UAA907 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA907_V1 Broad Institute GCA_000391705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/705/GCF_000391705.1_Ente_faec_UAA907_V1/ na na na haploid bacteria 2973978 2968931 37.500000 0 21 33 NCBI RefSeq GCF_000391705.1-RS_2026_01_12 2026-01-12 2898 2791 65 na GCF_000391725.1 PRJNA224116 SAMN00808942 AISK00000000.1 na 1157377 1351 Enterococcus faecalis EnGen0118 strain=UAA943 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA943_V1 Broad Institute GCA_000391725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/725/GCF_000391725.1_Ente_faec_UAA943_V1/ na na na haploid bacteria 2957369 2953377 37.500000 0 10 18 NCBI RefSeq GCF_000391725.1-RS_2026_01_12 2026-01-12 2880 2754 82 na GCF_000391745.1 PRJNA224116 SAMN00808943 AISL00000000.1 na 1157416 1352 Enterococcus faecium EnGen0131 strain=109 A1 na latest Scaffold Major Full 2013-05-14 Ente_faec_109_A1_V1 Broad Institute GCA_000391745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/745/GCF_000391745.1_Ente_faec_109_A1_V1/ na na na haploid bacteria 2692174 2671680 38.000000 0 8 35 NCBI RefSeq GCF_000391745.1-RS_2026_01_20 2026-01-20 2622 2422 80 na GCF_000391765.1 PRJNA224116 SAMN00808944 AISM00000000.1 na 1157417 1354 Enterococcus hirae EnGen0127 strain=EnGen0127 na latest Scaffold Major Full 2013-05-14 Ente_faec_2006-70-121_V1 Broad Institute GCA_000391765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/765/GCF_000391765.1_Ente_faec_2006-70-121_V1/ na na na haploid bacteria 2971145 2948802 36.500000 0 10 32 NCBI RefSeq GCF_000391765.1-RS_2026_01_30 2026-01-30 2789 2658 62 na GCF_000391785.1 PRJNA224116 SAMN00808945 AISN00000000.1 na 1157418 1352 Enterococcus faecium EnGen0124 strain=7230532-1 na latest Scaffold Major Full 2013-05-13 Ente_faec_7230532-1_V1 Broad Institute GCA_000391785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/785/GCF_000391785.1_Ente_faec_7230532-1_V1/ na na na haploid bacteria 2587813 2560270 38.000000 0 6 33 NCBI RefSeq GCF_000391785.1-RS_2026_01_23 2026-01-23 2492 2301 78 na GCF_000391805.1 PRJNA224116 SAMN00808947 AISO00000000.1 na 1157419 1352 Enterococcus faecium EnGen0125 strain=7330381-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330381-1_V1 Broad Institute GCA_000391805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/805/GCF_000391805.1_Ente_faec_7330381-1_V1/ na na na haploid bacteria 2598176 2582845 38.000000 0 9 31 NCBI RefSeq GCF_000391805.1-RS_2026_01_20 2026-01-20 2519 2312 77 na GCF_000391825.1 PRJNA224116 SAMN00808948 AISP00000000.1 na 1157420 1352 Enterococcus faecium EnGen0133 strain=7330446-2 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330446-2_V1 Broad Institute GCA_000391825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/825/GCF_000391825.1_Ente_faec_7330446-2_V1/ na na na haploid bacteria 2652120 2641790 38.000000 0 10 24 NCBI RefSeq GCF_000391825.1-RS_2026_01_20 2026-01-20 2597 2391 93 na GCF_000391845.1 PRJNA224116 SAMN00808949 AISQ00000000.1 na 1157421 1352 Enterococcus faecium EnGen0126 strain=7330519-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330519-3_V1 Broad Institute GCA_000391845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/845/GCF_000391845.1_Ente_faec_7330519-3_V1/ na na na haploid bacteria 2591733 2579871 38.500000 0 9 27 NCBI RefSeq GCF_000391845.1-RS_2026_01_20 2026-01-20 2517 2322 78 na GCF_000391865.1 PRJNA224116 SAMN00808950 AISR00000000.1 na 1157422 1352 Enterococcus faecium EnGen0135 strain=7330614-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_7330614-1_V1 Broad Institute GCA_000391865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/865/GCF_000391865.1_Ente_faec_7330614-1_V1/ na na na haploid bacteria 2587391 2567117 38.000000 0 7 27 NCBI RefSeq GCF_000391865.1-RS_2026_01_20 2026-01-20 2499 2305 77 na GCF_000391885.1 PRJNA224116 SAMN00808951 AISS00000000.1 na 1157423 1352 Enterococcus faecium EnGen0129 strain=7330884-2 na latest Scaffold Major Full 2013-05-13 Ente_faec_7330884-2_V1 Broad Institute GCA_000391885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/885/GCF_000391885.1_Ente_faec_7330884-2_V1/ na na na haploid bacteria 2557739 2543904 38.500000 0 8 25 NCBI RefSeq GCF_000391885.1-RS_2026_01_24 2026-01-24 2490 2295 88 na GCF_000391905.1 PRJNA224116 SAMN00808952 AIST00000000.1 na 1157424 1352 Enterococcus faecium EnGen0134 strain=7430166-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_7430166-3_V1 Broad Institute GCA_000391905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/905/GCF_000391905.1_Ente_faec_7430166-3_V1/ na na na haploid bacteria 2598123 2579452 38.000000 0 9 34 NCBI RefSeq GCF_000391905.1-RS_2026_01_20 2026-01-20 2531 2339 75 na GCF_000391925.1 PRJNA224116 SAMN00808953 AISU00000000.1 na 1157425 1352 Enterococcus faecium EnGen0130 strain=841V03 na latest Scaffold Major Full 2013-05-14 Ente_faec_841V03_V1 Broad Institute GCA_000391925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/925/GCF_000391925.1_Ente_faec_841V03_V1/ na na na haploid bacteria 2672551 2654019 38.000000 0 12 34 NCBI RefSeq GCF_000391925.1-RS_2026_01_20 2026-01-20 2599 2397 72 na GCF_000391945.1 PRJNA224116 SAMN00808958 AISY00000000.1 na 1157429 1352 Enterococcus faecium EnGen0128 strain=9730219-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_9730219-1_V1 Broad Institute GCA_000391945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/945/GCF_000391945.1_Ente_faec_9730219-1_V1/ na na na haploid bacteria 2592132 2581572 38.000000 0 9 26 NCBI RefSeq GCF_000391945.1-RS_2026_01_20 2026-01-20 2529 2348 66 na GCF_000391965.1 PRJNA224116 SAMN00808959 AISZ00000000.1 na 1157430 1352 Enterococcus faecium EnGen0132 strain=9730357-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_9730357-1_V1 Broad Institute GCA_000391965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/965/GCF_000391965.1_Ente_faec_9730357-1_V1/ na na na haploid bacteria 2619389 2599523 38.000000 0 5 24 NCBI RefSeq GCF_000391965.1-RS_2026_01_23 2026-01-23 2526 2345 66 na GCF_000391985.1 PRJNA224116 SAMN00808960 AITA00000000.1 na 1157431 1352 Enterococcus faecium EnGen0136 strain=9731349-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_9731349-1_V1 Broad Institute GCA_000391985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/391/985/GCF_000391985.1_Ente_faec_9731349-1_V1/ na na na haploid bacteria 2654362 2609133 38.000000 0 21 59 NCBI RefSeq GCF_000391985.1-RS_2026_01_20 2026-01-20 2601 2375 79 na GCF_000392005.1 PRJNA224116 SAMN00808961 AITB00000000.1 na 1157432 1352 Enterococcus faecium EnGen0137 strain=9731352-4 na latest Scaffold Major Full 2013-05-13 Ente_faec_9731352-4_V1 Broad Institute GCA_000392005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/005/GCF_000392005.1_Ente_faec_9731352-4_V1/ na na na haploid bacteria 2651966 2630628 38.000000 0 8 40 NCBI RefSeq GCF_000392005.1-RS_2026_01_20 2026-01-20 2610 2417 57 na GCF_000392025.1 PRJNA224116 SAMN00808962 AITC00000000.1 na 1157433 1352 Enterococcus faecium EnGen0138 strain=9830091-5 na latest Scaffold Major Full 2013-05-13 Ente_faec_9830091-5_V1 Broad Institute GCA_000392025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/025/GCF_000392025.1_Ente_faec_9830091-5_V1/ na na na haploid bacteria 2637217 2623927 38.500000 0 7 30 NCBI RefSeq GCF_000392025.1-RS_2026_01_20 2026-01-20 2582 2366 93 na GCF_000392045.1 PRJNA224116 SAMN00808964 AITE00000000.1 na 1157435 1352 Enterococcus faecium EnGen0140 strain=9830512-2 na latest Scaffold Major Full 2013-05-14 Ente_faec_9830512-2_V1 Broad Institute GCA_000392045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/045/GCF_000392045.1_Ente_faec_9830512-2_V1/ na na na haploid bacteria 2655685 2628932 38.000000 0 6 32 NCBI RefSeq GCF_000392045.1-RS_2026_01_20 2026-01-20 2581 2390 75 na GCF_000392065.1 PRJNA224116 SAMN00808966 AITG00000000.1 na 1157437 1352 Enterococcus faecium EnGen0142 strain=9830565-4 na latest Scaffold Major Full 2013-05-14 Ente_faec_9830565-4_V1 Broad Institute GCA_000392065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/065/GCF_000392065.1_Ente_faec_9830565-4_V1/ na na na haploid bacteria 2612716 2599676 38.000000 0 7 27 NCBI RefSeq GCF_000392065.1-RS_2026_01_20 2026-01-20 2531 2320 90 na GCF_000392085.1 PRJNA224116 SAMN00808970 AITJ00000000.1 na 1157440 1352 Enterococcus faecium EnGen0145 strain=9930238-2 na latest Scaffold Major Full 2013-05-14 Ente_faec_9930238-2_V1 Broad Institute GCA_000392085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/085/GCF_000392085.1_Ente_faec_9930238-2_V1/ na na na haploid bacteria 2589775 2574632 38.000000 0 6 23 NCBI RefSeq GCF_000392085.1-RS_2026_01_20 2026-01-20 2498 2297 75 na GCF_000392105.1 PRJNA224116 SAMN00808971 AITK00000000.1 na 1157441 1352 Enterococcus faecium EnGen0146 strain=9931110-4 na latest Scaffold Major Full 2013-05-14 Ente_faec_9931110-4_V1 Broad Institute GCA_000392105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/105/GCF_000392105.1_Ente_faec_9931110-4_V1/ na na na haploid bacteria 2662881 2633174 38.000000 0 11 39 NCBI RefSeq GCF_000392105.1-RS_2026_01_20 2026-01-20 2596 2395 76 na GCF_000392125.1 PRJNA224116 SAMN00808972 AITL00000000.1 na 1157442 1352 Enterococcus faecium EnGen0147 strain=A17 Sv1 na latest Scaffold Major Full 2013-05-13 Ente_faec_A17_Sv1_V1 Broad Institute GCA_000392125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/125/GCF_000392125.1_Ente_faec_A17_Sv1_V1/ na na na haploid bacteria 2589235 2568889 38.000000 0 7 31 NCBI RefSeq GCF_000392125.1-RS_2026_01_23 2026-01-23 2501 2309 80 na GCF_000392145.1 PRJNA224116 SAMN00808973 AITM00000000.1 na 1157443 1352 Enterococcus faecium EnGen0148 strain=E8sv3 na latest Scaffold Major Full 2013-05-13 Ente_faec_E8sv3_V1 Broad Institute GCA_000392145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/145/GCF_000392145.1_Ente_faec_E8sv3_V1/ na na na haploid bacteria 2615158 2595835 38.000000 0 8 28 NCBI RefSeq GCF_000392145.1-RS_2026_01_20 2026-01-20 2533 2338 80 na GCF_000392165.1 PRJNA224116 SAMN00808974 AITO00000000.1 na 1157444 1352 Enterococcus faecium EnGen0149 strain=H17243 na latest Scaffold Major Full 2013-05-14 Ente_faec_H17243_V1 Broad Institute GCA_000392165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/165/GCF_000392165.1_Ente_faec_H17243_V1/ na na na haploid bacteria 2769858 2761950 38.000000 0 15 28 NCBI RefSeq GCF_000392165.1-RS_2026_01_15 2026-01-15 2701 2564 67 na GCF_000392195.1 PRJNA224116 SAMN00808976 AITQ00000000.1 na 1157446 1352 Enterococcus faecium EnGen0151 strain=H17575 na latest Scaffold Major Full 2013-05-14 Ente_faec_H17575_V1 Broad Institute GCA_000392195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/195/GCF_000392195.1_Ente_faec_H17575_V1/ na na na haploid bacteria 2621819 2607004 38.000000 0 9 28 NCBI RefSeq GCF_000392195.1-RS_2026_01_20 2026-01-20 2534 2339 82 na GCF_000392215.1 PRJNA224116 SAMN00808977 AITX00000000.1 na 1157447 1352 Enterococcus faecium EnGen0152 strain=HM1071 na latest Scaffold Major Full 2013-05-14 Ente_faec_HM1071_V1 Broad Institute GCA_000392215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/215/GCF_000392215.1_Ente_faec_HM1071_V1/ na na na haploid bacteria 3051517 2971838 37.500000 0 47 95 NCBI RefSeq GCF_000392215.1-RS_2026_01_12 2026-01-12 3012 2814 64 na GCF_000392255.1 PRJNA224116 SAMN00808981 AIUC00000000.1 na 1157450 1352 Enterococcus faecium EnGen0155 strain=KH36syn na latest Scaffold Major Full 2014-09-23 Ente_faec_KH36syn_V1 Broad Institute GCA_000392255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/255/GCF_000392255.1_Ente_faec_KH36syn_V1/ na na na haploid bacteria 2622176 2593063 38.000000 0 8 34 NCBI RefSeq GCF_000392255.1-RS_2026_01_20 2026-01-20 2530 2340 67 na GCF_000392275.1 PRJNA245153 SAMN01908518 AORD00000000.1 reference genome 1286976 223192 Phaeoacremonium minimum UCRPA7 strain=UCRPA7 na latest Scaffold Major Full 2013-05-16 UCRPA7V03 UC Davis GCA_000392275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/275/GCF_000392275.1_UCRPA7V03/ na na na haploid fungi 47465449 47381958 49.500000 0 624 1278 UC Davis Annotation submitted by UC Davis 2017-07-12 8834 8834 0 23814032 GCF_000392315.1 PRJNA224116 SAMN00808978 AIUA00000000.1 na 1157448 1352 Enterococcus faecium EnGen0153 strain=HM1074 na latest Scaffold Major Full 2013-05-14 Ente_faec_HM1074_V1 Broad Institute GCA_000392315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/315/GCF_000392315.1_Ente_faec_HM1074_V1/ na na na haploid bacteria 2823832 2789730 38.000000 0 27 64 NCBI RefSeq GCF_000392315.1-RS_2026_01_22 2026-01-22 2795 2550 81 na GCF_000392355.1 PRJNA224116 SAMN01780078 APSO00000000.1 na 1145128 487 Neisseria meningitidis 97018 strain=97018 na latest Contig Major Full 2013-05-01 ASM39235v1 IGS GCA_000392355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/355/GCF_000392355.1_ASM39235v1/ na na na haploid bacteria 2152341 2152341 52.000000 0 137 137 NCBI RefSeq GCF_000392355.1-RS_2026_01_03 2026-01-03 2265 1973 85 na GCF_000392375.2 PRJNA224116 SAMN02471386 ARYO00000000.1 na 1121342 1519 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain=DSM 2637 na latest Contig Minor Full 2013-05-14 ASM39237v2 Universita Cattolica' del Sacro Cuore GCA_000392375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/375/GCF_000392375.2_ASM39237v2/ na assembly from type material na haploid bacteria 3001927 3001927 31.000000 0 174 174 NCBI RefSeq GCF_000392375.2-RS_2026_01_29 2026-01-29 3072 2918 46 23950123 GCF_000392435.1 PRJNA224116 SAMN02602963 na reference genome 1332188 1332188 Candidatus Saccharimonas aalborgensis na TM71 latest Complete Genome Major Full 2013-05-14 ASM39243v1 Aalborg University GCA_000392435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/435/GCF_000392435.1_ASM39243v1/ na na na haploid bacteria 1013781 1013781 48.500000 1 1 1 NCBI RefSeq GCF_000392435.1-RS_2025_12_13 2025-12-13 1093 1036 53 23707974 GCF_000392455.3 PRJNA224116 SAMN02230257 na na 1311573 210 Helicobacter pylori UM032 strain=UM032 na latest Complete Genome Major Full 2014-09-15 ASM39245v3 University of Malaya GCA_000392455.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/455/GCF_000392455.3_ASM39245v3/ na na na haploid bacteria 1593537 1593537 39.000000 1 1 1 NCBI RefSeq GCF_000392455.3-RS_2025_12_16 2025-12-16 1553 1432 45 23957912 GCF_000392475.3 PRJNA224116 SAMN02230259 na na 1321938 210 Helicobacter pylori UM299 strain=UM299 na latest Complete Genome Major Full 2014-09-15 ASM39247v3 University of Malaya GCA_000392475.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/475/GCF_000392475.3_ASM39247v3/ na na na haploid bacteria 1594569 1594569 39.000000 1 1 1 NCBI RefSeq GCF_000392475.3-RS_2025_12_16 2025-12-16 1553 1431 45 23957912 GCF_000392515.3 PRJNA224116 SAMN02604194 na na 1321939 210 Helicobacter pylori UM037 strain=UM037 na latest Complete Genome Major Full 2014-09-22 ASM39251v3 University of Malaya GCA_000392515.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/515/GCF_000392515.3_ASM39251v3/ na na na haploid bacteria 1692794 1692794 39.000000 1 1 1 NCBI RefSeq GCF_000392515.3-RS_2026_01_14 2026-01-14 1640 1493 45 na GCF_000392535.3 PRJNA224116 SAMN02230271 na na 1321940 210 Helicobacter pylori UM066 strain=UM066 na latest Complete Genome Major Full 2014-09-22 ASM39253v3 University of Malaya GCA_000392535.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/535/GCF_000392535.3_ASM39253v3/ na na na haploid bacteria 1658047 1658047 38.500000 1 1 1 NCBI RefSeq GCF_000392535.3-RS_2025_07_15 2025-07-15 1596 1470 45 na GCF_000392555.1 PRJNA224116 SAMN02470149 ASHA00000000.1 na 1317130 562 Escherichia coli O157 str. NCCP15739 strain=NCCP15739 na latest Contig Major Full 2013-05-14 TG1203D3337 Korea National Institute of Health, Korea Centers for Disease Control & Prevention GCA_000392555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/555/GCF_000392555.1_TG1203D3337/ na na na haploid bacteria 5310324 5310324 50.500000 0 479 479 NCBI RefSeq GCF_000392555.1-RS_2025_06_14 2025-06-14 5470 5037 43 na GCF_000392575.1 PRJNA224116 SAMN02470150 ASHB00000000.1 na 1317131 562 Escherichia coli O157 str. NCCP15738 strain=NCCP15738 na latest Contig Major Full 2013-05-14 TG1203D3338 Korea National Institute of Health, Korea Centers for Disease Control & Prevention GCA_000392575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/575/GCF_000392575.1_TG1203D3338/ na na na haploid bacteria 4959704 4959704 50.500000 0 415 415 NCBI RefSeq GCF_000392575.1-RS_2025_05_20 2025-05-20 4999 4696 39 27096008 GCF_000392595.1 PRJNA224116 SAMN02044791 AQQO00000000.1 na 1315976 703 Plesiomonas shigelloides 302-73 strain=302-73 na latest Scaffold Major Full 2013-05-16 PleShi1.0 Centro Nacional de Analisis Genomico GCA_000392595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/595/GCF_000392595.1_PleShi1.0/ na na na haploid bacteria 4083958 3908112 51.000000 0 296 389 NCBI RefSeq GCF_000392595.1-RS_2025_08_05 2025-08-05 3507 3322 107 23814109 GCF_000392615.1 PRJNA224116 SAMN02471364 AQPX00000000.1 na 1285586 1421 Lysinibacillus sphaericus OT4b.31 strain=OT4b.31 na latest Scaffold Major Full 2013-05-14 L.sphaericusOT4b.31_v01 Centro de Investigaciones Microbiológicas - Universidad de los Andes GCA_000392615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/615/GCF_000392615.1_L.sphaericusOT4b.31_v01/ na na na haploid bacteria 4858502 4856302 37.500000 0 72 94 NCBI RefSeq GCF_000392615.1-RS_2026_03_12 2026-03-12 4751 4544 47 24501644 GCF_000392675.1 PRJNA224116 SAMN00839771 ASEN00000000.1 na 1169251 1351 Enterococcus faecalis EnGen0332 strain=SF350 na latest Scaffold Major Full 2013-05-14 Ente_faec_SF350_V1 Broad Institute GCA_000392675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/675/GCF_000392675.1_Ente_faec_SF350_V1/ na na na haploid bacteria 3299997 3276100 37.000000 0 28 49 NCBI RefSeq GCF_000392675.1-RS_2026_01_21 2026-01-21 3279 3139 52 na GCF_000392695.1 PRJNA224116 SAMN01780089 APSZ00000000.1 na 1145139 487 Neisseria meningitidis 2003022 strain=2003022 na latest Contig Major Full 2013-05-01 ASM39269v2 IGS GCA_000392695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/695/GCF_000392695.1_ASM39269v2/ na na na haploid bacteria 2144648 2144648 52.000000 0 131 131 NCBI RefSeq GCF_000392695.1-RS_2025_08_25 2025-08-25 2218 1962 72 na GCF_000392715.1 PRJNA224116 SAMN01780105 APTP00000000.1 na 1145155 487 Neisseria meningitidis NM1482 strain=NM1482 na latest Contig Major Full 2013-05-01 ASM39271v2 IGS GCA_000392715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/715/GCF_000392715.1_ASM39271v2/ na na na haploid bacteria 2152505 2152505 52.000000 0 140 140 NCBI RefSeq GCF_000392715.1-RS_2026_01_02 2026-01-02 2210 1952 83 na GCF_000392735.1 PRJNA224116 SAMN01780158 APUZ00000000.1 na 1145191 487 Neisseria meningitidis NM27 strain=NM27 na latest Contig Major Full 2013-05-01 ASM39273v2 IGS GCA_000392735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/735/GCF_000392735.1_ASM39273v2/ na na na haploid bacteria 2187165 2187165 52.000000 0 151 151 NCBI RefSeq GCF_000392735.1-RS_2026_01_03 2026-01-03 2260 1967 85 na GCF_000392755.1 PRJNA224116 SAMN00847596 ASCU00000000.1 na 1169280 1351 Enterococcus faecalis EnGen0341 strain=SF6375 na latest Scaffold Major Full 2013-05-14 Ente_faec_SF6375_V1 Broad Institute GCA_000392755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/755/GCF_000392755.1_Ente_faec_SF6375_V1/ na na na haploid bacteria 3243860 3229327 37.500000 0 28 45 NCBI RefSeq GCF_000392755.1-RS_2026_01_21 2026-01-21 3219 3038 73 na GCF_000392775.1 PRJNA224116 SAMN00847597 ASCV00000000.1 na 1169281 1351 Enterococcus faecalis EnGen0366 strain=599951 na latest Scaffold Major Full 2013-05-14 Ente_faec_599951_V1 Broad Institute GCA_000392775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/775/GCF_000392775.1_Ente_faec_599951_V1/ na na na haploid bacteria 3274276 3269521 37.500000 0 8 15 NCBI RefSeq GCF_000392775.1-RS_2026_01_20 2026-01-20 3316 3140 88 na GCF_000392795.1 PRJNA224116 SAMN00847598 ASCW00000000.1 na 1169282 1351 Enterococcus faecalis EnGen0344 strain=12030 na latest Scaffold Major Full 2013-05-14 Ente_faec_12030_V1 Broad Institute GCA_000392795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/795/GCF_000392795.1_Ente_faec_12030_V1/ na na na haploid bacteria 3007859 3001396 37.500000 0 4 14 NCBI RefSeq GCF_000392795.1-RS_2026_01_11 2026-01-11 2902 2762 57 na GCF_000392815.1 PRJNA224116 SAMN00847599 ASCX00000000.1 na 1169283 1351 Enterococcus faecalis EnGen0361 strain=79-3 na latest Scaffold Major Full 2013-05-14 Ente_faec_79-3_V1 Broad Institute GCA_000392815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/815/GCF_000392815.1_Ente_faec_79-3_V1/ na na na haploid bacteria 3165167 3162182 37.500000 0 17 19 NCBI RefSeq GCF_000392815.1-RS_2026_01_20 2026-01-20 3154 2998 69 na GCF_000392835.1 PRJNA224116 SAMN00847600 ASCY00000000.1 na 1169284 1351 Enterococcus faecalis EnGen0345 strain=E99 na latest Scaffold Major Full 2013-05-14 Ente_faec_E99_V1 Broad Institute GCA_000392835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/835/GCF_000392835.1_Ente_faec_E99_V1/ na na na haploid bacteria 3109886 3070311 37.500000 0 14 36 NCBI RefSeq GCF_000392835.1-RS_2026_01_11 2026-01-11 3026 2880 73 na GCF_000392855.1 PRJNA224116 SAMN00847601 ASCZ00000000.1 na 1169285 1351 Enterococcus faecalis EnGen0346 strain=T20 na latest Scaffold Major Full 2013-05-14 Ente_faec_T20_V1 Broad Institute GCA_000392855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/855/GCF_000392855.1_Ente_faec_T20_V1/ na na na haploid bacteria 2723227 2716136 37.500000 0 4 14 NCBI RefSeq GCF_000392855.1-RS_2025_08_25 2025-08-25 2580 2489 70 na GCF_000392875.1 PRJNA224116 SAMN00847602 ASDA00000000.1 na 1169286 1351 Enterococcus faecalis ATCC 19433 = NBRC 100480 strain=ATCC 19433 na latest Scaffold Major Full 2013-05-14 Ente_faec_ATCC_19433_V1 Broad Institute GCA_000392875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/875/GCF_000392875.1_Ente_faec_ATCC_19433_V1/ na assembly from type material na haploid bacteria 2881400 2876436 37.500000 0 3 11 NCBI RefSeq GCF_000392875.1-RS_2026_02_10 2026-02-10 2847 2685 88 na GCF_000392895.1 PRJNA224116 SAMN00847603 ASDB00000000.1 na 1169287 1351 Enterococcus faecalis EnGen0362 strain=T12 na latest Scaffold Major Full 2013-05-14 Ente_faec_T12_V1 Broad Institute GCA_000392895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/895/GCF_000392895.1_Ente_faec_T12_V1/ na na na haploid bacteria 3004508 2995910 37.000000 0 15 25 NCBI RefSeq GCF_000392895.1-RS_2026_01_11 2026-01-11 2908 2791 72 na GCF_000392915.1 PRJNA224116 SAMN00847604 ASDC00000000.1 na 1169288 1351 Enterococcus faecalis EnGen0348 strain=D3 na latest Scaffold Major Full 2013-05-14 Ente_faec_D3_V1 Broad Institute GCA_000392915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/915/GCF_000392915.1_Ente_faec_D3_V1/ na na na haploid bacteria 3090115 3074939 37.500000 0 15 33 NCBI RefSeq GCF_000392915.1-RS_2025_08_05 2025-08-05 3053 2924 85 na GCF_000392935.1 PRJNA224116 SAMN00847605 ASDD00000000.1 na 1169289 1351 Enterococcus faecalis EnGen0363 strain=RMC5 na latest Scaffold Major Full 2013-05-14 Ente_faec_RMC5_V1 Broad Institute GCA_000392935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/935/GCF_000392935.1_Ente_faec_RMC5_V1/ na na na haploid bacteria 2946640 2936085 37.500000 0 17 32 NCBI RefSeq GCF_000392935.1-RS_2026_01_11 2026-01-11 2840 2744 63 na GCF_000392955.1 PRJNA224116 SAMN00847606 ASDE00000000.1 na 1169290 1351 Enterococcus faecalis ATCC 35038 strain=ATCC 35038 na latest Scaffold Major Full 2013-05-14 Ente_faec_ATCC_35038_V1 Broad Institute GCA_000392955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/955/GCF_000392955.1_Ente_faec_ATCC_35038_V1/ na na na haploid bacteria 2976244 2965567 37.500000 0 10 22 NCBI RefSeq GCF_000392955.1-RS_2026_01_11 2026-01-11 2919 2802 81 na GCF_000392975.1 PRJNA224116 SAMN00847607 ASDF00000000.1 na 1169291 1351 Enterococcus faecalis EnGen0364 strain=T6 na latest Scaffold Major Full 2013-05-14 Ente_faec_T6_V1 Broad Institute GCA_000392975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/975/GCF_000392975.1_Ente_faec_T6_V1/ na na na haploid bacteria 2989904 2978349 37.500000 0 13 28 NCBI RefSeq GCF_000392975.1-RS_2026_01_11 2026-01-11 2854 2738 83 na GCF_000392995.1 PRJNA224116 SAMN00847608 ASDG00000000.1 na 1169292 1351 Enterococcus faecalis EnGen0350 strain=T17 na latest Scaffold Major Full 2013-05-14 Ente_faec_T17_V1 Broad Institute GCA_000392995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/392/995/GCF_000392995.1_Ente_faec_T17_V1/ na na na haploid bacteria 2998094 2984249 37.500000 0 5 18 NCBI RefSeq GCF_000392995.1-RS_2025_08_25 2025-08-25 2911 2740 80 na GCF_000393015.1 PRJNA224116 SAMN00847609 ASDH00000000.1 reference genome 1169293 1351 Enterococcus faecalis EnGen0336 strain=T5 na latest Scaffold Major Full 2013-05-14 Ente_faec_T5_V1 Broad Institute GCA_000393015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/015/GCF_000393015.1_Ente_faec_T5_V1/ na na na haploid bacteria 2870381 2862665 37.500000 0 3 16 NCBI RefSeq GCF_000393015.1-RS_2025_12_09 2025-12-09 2757 2665 67 na GCF_000393035.1 PRJNA224116 SAMN00847610 ASDI00000000.1 na 1169294 1351 Enterococcus faecalis EnGen0351 strain=T9 na latest Scaffold Major Full 2013-05-14 Ente_faec_T9_V1 Broad Institute GCA_000393035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/035/GCF_000393035.1_Ente_faec_T9_V1/ na na na haploid bacteria 2991936 2987641 37.500000 0 3 10 NCBI RefSeq GCF_000393035.1-RS_2026_01_11 2026-01-11 2929 2791 94 na GCF_000393055.1 PRJNA224116 SAMN00847611 ASDJ00000000.1 na 1169295 1351 Enterococcus faecalis EnGen0352 strain=T10 na latest Scaffold Major Full 2013-05-14 Ente_faec_T10_V1 Broad Institute GCA_000393055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/055/GCF_000393055.1_Ente_faec_T10_V1/ na na na haploid bacteria 2783388 2777917 37.500000 0 4 12 NCBI RefSeq GCF_000393055.1-RS_2026_01_20 2026-01-20 2661 2509 74 na GCF_000393075.1 PRJNA224116 SAMN00847612 ASDK00000000.1 na 1169296 1351 Enterococcus faecalis EnGen0337 strain=T18 na latest Scaffold Major Full 2013-05-14 Ente_faec_T18_V1 Broad Institute GCA_000393075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/075/GCF_000393075.1_Ente_faec_T18_V1/ na na na haploid bacteria 2926625 2919446 37.500000 0 5 16 NCBI RefSeq GCF_000393075.1-RS_2026_01_11 2026-01-11 2831 2725 75 na GCF_000393095.1 PRJNA224116 SAMN00847613 ASDL00000000.1 na 1169297 1351 Enterococcus faecalis EnGen0365 strain=F1 na latest Scaffold Major Full 2013-05-14 Ente_faec_F1_V1 Broad Institute GCA_000393095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/095/GCF_000393095.1_Ente_faec_F1_V1/ na na na haploid bacteria 3086314 3068580 37.500000 0 11 39 NCBI RefSeq GCF_000393095.1-RS_2026_01_16 2026-01-16 3005 2824 82 na GCF_000393115.1 PRJNA224116 SAMN00847614 ASDM00000000.1 na 1169298 1351 Enterococcus faecalis EnGen0342 strain=SS-7 na latest Scaffold Major Full 2013-05-14 Ente_faec_SS-7_V1 Broad Institute GCA_000393115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/115/GCF_000393115.1_Ente_faec_SS-7_V1/ na na na haploid bacteria 3007967 3005342 37.500000 0 9 13 NCBI RefSeq GCF_000393115.1-RS_2026_01_11 2026-01-11 2913 2759 71 na GCF_000393135.1 PRJNA224116 SAMN00847615 ASDN00000000.1 na 1169299 1351 Enterococcus faecalis EnGen0354 strain=RMC1 na latest Scaffold Major Full 2013-05-14 Ente_faec_RMC1_V1 Broad Institute GCA_000393135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/135/GCF_000393135.1_Ente_faec_RMC1_V1/ na na na haploid bacteria 3165943 3154068 37.000000 0 22 38 NCBI RefSeq GCF_000393135.1-RS_2026_01_21 2026-01-21 3189 3022 66 na GCF_000393155.1 PRJNA224116 SAMN00847616 ASDO00000000.1 na 1169300 1351 Enterococcus faecalis EnGen0355 strain=T19 na latest Scaffold Major Full 2013-05-14 Ente_faec_T19_V1 Broad Institute GCA_000393155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/155/GCF_000393155.1_Ente_faec_T19_V1/ na na na haploid bacteria 3034173 3028584 37.500000 0 9 20 NCBI RefSeq GCF_000393155.1-RS_2026_01_11 2026-01-11 3018 2872 79 na GCF_000393175.1 PRJNA224116 SAMN00847617 ASDP00000000.1 na 1169301 1351 Enterococcus faecalis EnGen0369 strain=39-5 na latest Scaffold Major Full 2013-05-14 Ente_faec_39-5_V1 Broad Institute GCA_000393175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/175/GCF_000393175.1_Ente_faec_39-5_V1/ na na na haploid bacteria 3122081 3103476 37.500000 0 25 39 NCBI RefSeq GCF_000393175.1-RS_2026_01_22 2026-01-22 3121 2930 100 na GCF_000393195.1 PRJNA224116 SAMN00847618 ASDQ00000000.1 na 1169302 1351 Enterococcus faecalis EnGen0356 strain=B-4-111 na latest Scaffold Major Full 2013-05-14 Ente_faec_B-4-111_V1 Broad Institute GCA_000393195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/195/GCF_000393195.1_Ente_faec_B-4-111_V1/ na na na haploid bacteria 2966710 2959305 37.500000 0 7 16 NCBI RefSeq GCF_000393195.1-RS_2026_01_11 2026-01-11 2834 2728 73 na GCF_000393215.1 PRJNA224116 SAMN00847619 ASDR00000000.1 na 1169303 1351 Enterococcus faecalis EnGen0357 strain=Fly 2 na latest Scaffold Major Full 2013-05-14 Ente_faec_Fly_2_V1 Broad Institute GCA_000393215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/215/GCF_000393215.1_Ente_faec_Fly_2_V1/ na na na haploid bacteria 2791828 2789098 37.500000 0 8 16 NCBI RefSeq GCF_000393215.1-RS_2025_08_25 2025-08-25 2653 2560 68 na GCF_000393235.1 PRJNA224116 SAMN00847620 ASDS00000000.1 na 1169304 1351 Enterococcus faecalis EnGen0358 strain=Merz151 na latest Scaffold Major Full 2013-05-14 Ente_faec_Merz151_V1 Broad Institute GCA_000393235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/235/GCF_000393235.1_Ente_faec_Merz151_V1/ na na na haploid bacteria 3063950 3051892 37.000000 0 20 37 NCBI RefSeq GCF_000393235.1-RS_2026_01_11 2026-01-11 2981 2844 53 na GCF_000393255.1 PRJNA224116 SAMN00847621 ASDT00000000.1 na 1169305 1351 Enterococcus faecalis EnGen0370 strain=SF339 na latest Scaffold Major Full 2013-05-14 Ente_faec_SF339_V1 Broad Institute GCA_000393255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/255/GCF_000393255.1_Ente_faec_SF339_V1/ na na na haploid bacteria 3122345 3116448 37.500000 0 13 25 NCBI RefSeq GCF_000393255.1-RS_2026_01_11 2026-01-11 3086 2915 92 na GCF_000393275.1 PRJNA224116 SAMN00847622 ASDU00000000.1 na 1169306 1351 Enterococcus faecalis EnGen0368 strain=Com7 na latest Scaffold Major Full 2013-05-14 Ente_faec_Com7_V1 Broad Institute GCA_000393275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/275/GCF_000393275.1_Ente_faec_Com7_V1/ na na na haploid bacteria 2996521 2984707 37.500000 0 7 16 NCBI RefSeq GCF_000393275.1-RS_2025_08_25 2025-08-25 2882 2746 79 na GCF_000393295.1 PRJNA224116 SAMN00847623 ASDV00000000.1 na 1169307 1351 Enterococcus faecalis EnGen0359 strain=TR197 na latest Scaffold Major Full 2013-05-14 Ente_faec_TR197_V1 Broad Institute GCA_000393295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/295/GCF_000393295.1_Ente_faec_TR197_V1/ na na na haploid bacteria 3341543 3333873 37.000000 0 12 22 NCBI RefSeq GCF_000393295.1-RS_2026_01_22 2026-01-22 3342 3182 74 na GCF_000393315.1 PRJNA224116 SAMN00847624 ASDW00000000.1 na 1169308 1351 Enterococcus faecalis EnGen0360 strain=RMC65 na latest Scaffold Major Full 2013-05-14 Ente_faec_RMC65_V1 Broad Institute GCA_000393315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/315/GCF_000393315.1_Ente_faec_RMC65_V1/ na na na haploid bacteria 2926898 2917981 37.500000 0 7 19 NCBI RefSeq GCF_000393315.1-RS_2026_01_11 2026-01-11 2868 2753 63 na GCF_000393335.1 PRJNA224116 SAMN00847625 ASDX00000000.1 na 1169309 1351 Enterococcus faecalis EnGen0340 strain=B653 na latest Scaffold Major Full 2013-05-14 Ente_faec_B653_V1 Broad Institute GCA_000393335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/335/GCF_000393335.1_Ente_faec_B653_V1/ na na na haploid bacteria 2833222 2828650 37.500000 0 5 11 NCBI RefSeq GCF_000393335.1-RS_2026_01_11 2026-01-11 2741 2647 56 na GCF_000393355.1 PRJNA224116 SAMN00847626 ASDY00000000.1 na 1169310 1351 Enterococcus faecalis EnGen0367 strain=D173 na latest Scaffold Major Full 2013-05-14 Ente_faec_D173_V1 Broad Institute GCA_000393355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/355/GCF_000393355.1_Ente_faec_D173_V1/ na na na haploid bacteria 2892249 2876393 37.500000 0 4 18 NCBI RefSeq GCF_000393355.1-RS_2026_01_16 2026-01-16 2841 2662 69 na GCF_000393375.1 PRJNA224116 SAMN00847627 ASDZ00000000.1 na 1169311 1351 Enterococcus faecalis ATCC 6055 strain=ATCC 6055 na latest Scaffold Major Full 2013-05-14 Ente_faec_ATCC_6055_V1 Broad Institute GCA_000393375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/375/GCF_000393375.1_Ente_faec_ATCC_6055_V1/ na na na haploid bacteria 3227457 3206924 37.000000 0 31 62 NCBI RefSeq GCF_000393375.1-RS_2026_01_20 2026-01-20 3239 3120 65 na GCF_000393395.1 PRJNA224116 SAMN00847628 ASEA00000000.1 na 1169312 1351 Enterococcus faecalis ATCC 10100 strain=ATCC 10100 na latest Scaffold Major Full 2013-05-14 Ente_faec_ATCC_10100_V1 Broad Institute GCA_000393395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/395/GCF_000393395.1_Ente_faec_ATCC_10100_V1/ na na na haploid bacteria 3004951 2995517 37.500000 0 6 18 NCBI RefSeq GCF_000393395.1-RS_2026_01_11 2026-01-11 2893 2771 57 na GCF_000393415.1 PRJNA224116 SAMN00847629 ASEB00000000.1 na 1169278 1352 Enterococcus faecium EnGen0372 strain=VAN 476 na latest Scaffold Major Full 2013-05-14 Ente_faec_VAN_476_V1 Broad Institute GCA_000393415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/415/GCF_000393415.1_Ente_faec_VAN_476_V1/ na na na haploid bacteria 2834240 2822334 38.000000 0 10 30 NCBI RefSeq GCF_000393415.1-RS_2026_01_15 2026-01-15 2720 2583 77 na GCF_000393435.1 PRJNA224116 SAMN00847630 ASEC00000000.1 na 1169279 1352 Enterococcus faecium EnGen0371 strain=VAN 327 na latest Scaffold Major Full 2013-05-14 Ente_faec_VAN_327_V1 Broad Institute GCA_000393435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/435/GCF_000393435.1_Ente_faec_VAN_327_V1/ na na na haploid bacteria 2798262 2787623 38.000000 0 17 34 NCBI RefSeq GCF_000393435.1-RS_2026_01_16 2026-01-16 2730 2556 74 na GCF_000393455.1 PRJNA224116 SAMN00847631 ASED00000000.1 na 1169313 1351 Enterococcus faecalis EnGen0338 strain=SF21520 na latest Scaffold Major Full 2013-05-14 Ente_faec_SF21520_V1 Broad Institute GCA_000393455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/455/GCF_000393455.1_Ente_faec_SF21520_V1/ na na na haploid bacteria 3212731 3199798 37.000000 0 32 47 NCBI RefSeq GCF_000393455.1-RS_2026_01_20 2026-01-20 3174 3017 76 na GCF_000393475.1 PRJNA224116 SAMN00847632 ASEE00000000.1 na 1169314 1351 Enterococcus faecalis EnGen0339 strain=TR161 na latest Scaffold Major Full 2013-05-14 Ente_faec_TR161_V1 Broad Institute GCA_000393475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/475/GCF_000393475.1_Ente_faec_TR161_V1/ na na na haploid bacteria 3269889 3255501 37.000000 0 31 47 NCBI RefSeq GCF_000393475.1-RS_2026_01_20 2026-01-20 3279 3127 77 na GCF_000393495.1 PRJNA224116 SAMN00839763 ASEF00000000.1 na 1169246 1351 Enterococcus faecalis EnGen0327 strain=A-3-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_A-3-1_V1 Broad Institute GCA_000393495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/495/GCF_000393495.1_Ente_faec_A-3-1_V1/ na na na haploid bacteria 3086268 3071471 37.500000 0 8 18 NCBI RefSeq GCF_000393495.1-RS_2026_01_11 2026-01-11 3014 2880 77 na GCF_000393515.1 PRJNA224116 SAMN00839764 ASEG00000000.1 na 1169250 1351 Enterococcus faecalis EnGen0331 strain=Merz89 na latest Scaffold Major Full 2013-05-14 Ente_faec_Merz89_V1 Broad Institute GCA_000393515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/515/GCF_000393515.1_Ente_faec_Merz89_V1/ na na na haploid bacteria 3044145 3030460 37.000000 0 27 41 NCBI RefSeq GCF_000393515.1-RS_2026_01_11 2026-01-11 2984 2854 63 na GCF_000393535.1 PRJNA224116 SAMN00839765 ASEH00000000.1 na 1169248 1351 Enterococcus faecalis EnGen0329 strain=Merz192 na latest Scaffold Major Full 2013-05-14 Ente_faec_Merz192_V1 Broad Institute GCA_000393535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/535/GCF_000393535.1_Ente_faec_Merz192_V1/ na na na haploid bacteria 3047242 3039608 37.500000 0 17 29 NCBI RefSeq GCF_000393535.1-RS_2026_01_11 2026-01-11 2974 2849 57 na GCF_000393555.1 PRJNA224116 SAMN00839766 ASEI00000000.1 na 1169249 1351 Enterococcus faecalis EnGen0326 strain=Merz204 na latest Scaffold Major Full 2013-05-14 Ente_faec_Merz204_V1 Broad Institute GCA_000393555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/555/GCF_000393555.1_Ente_faec_Merz204_V1/ na na na haploid bacteria 2971253 2966833 37.500000 0 8 19 NCBI RefSeq GCF_000393555.1-RS_2026_01_11 2026-01-11 2876 2750 64 na GCF_000393575.1 PRJNA224116 SAMN00839767 ASEJ00000000.1 na 1169247 1351 Enterococcus faecalis EnGen0334 strain=D1 na latest Scaffold Major Full 2013-05-14 Ente_faec_D1_V1 Broad Institute GCA_000393575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/575/GCF_000393575.1_Ente_faec_D1_V1/ na na na haploid bacteria 2963434 2945508 37.500000 0 5 20 NCBI RefSeq GCF_000393575.1-RS_2026_01_11 2026-01-11 2878 2779 62 na GCF_000393595.1 PRJNA224116 SAMN00839768 ASEK00000000.1 na 1169253 1351 Enterococcus faecalis EnGen0333 strain=T4 na latest Scaffold Major Full 2013-05-14 Ente_faec_T4_V1 Broad Institute GCA_000393595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/595/GCF_000393595.1_Ente_faec_T4_V1/ na na na haploid bacteria 2912684 2904544 37.500000 0 5 18 NCBI RefSeq GCF_000393595.1-RS_2026_01_11 2026-01-11 2850 2707 62 na GCF_000393615.1 PRJNA224116 SAMN00839769 ASEL00000000.1 na 1169245 1351 Enterococcus faecalis EnGen0328 strain=A-2-1 na latest Scaffold Major Full 2013-05-14 Ente_faec_A-2-1_V1 Broad Institute GCA_000393615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/615/GCF_000393615.1_Ente_faec_A-2-1_V1/ na na na haploid bacteria 2955156 2945567 37.500000 0 5 16 NCBI RefSeq GCF_000393615.1-RS_2026_01_11 2026-01-11 2928 2767 87 na GCF_000393635.1 PRJNA224116 SAMN00839770 ASEM00000000.1 na 1169254 1351 Enterococcus faecalis EnGen0330 strain=T7 na latest Scaffold Major Full 2013-05-14 Ente_faec_T7_V1 Broad Institute GCA_000393635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/635/GCF_000393635.1_Ente_faec_T7_V1/ na na na haploid bacteria 2972560 2966835 37.500000 0 13 24 NCBI RefSeq GCF_000393635.1-RS_2026_01_11 2026-01-11 2942 2785 69 na GCF_000393675.1 PRJNA224116 SAMN00809099 AJAA00000000.1 na 1158550 1352 Enterococcus faecium EnGen0261 strain=UAA1024 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA1024_V1 Broad Institute GCA_000393675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/675/GCF_000393675.1_Ente_faec_UAA1024_V1/ na na na haploid bacteria 3029773 2977622 37.500000 0 23 68 NCBI RefSeq GCF_000393675.1-RS_2026_01_12 2026-01-12 3005 2826 64 na GCF_000393695.1 PRJNA224116 SAMN00809100 AJAB00000000.1 na 1158551 1352 Enterococcus faecium EnGen0262 strain=UAA1025 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA1025_V1 Broad Institute GCA_000393695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/695/GCF_000393695.1_Ente_faec_UAA1025_V1/ na na na haploid bacteria 3223418 3145321 37.500000 0 37 96 NCBI RefSeq GCF_000393695.1-RS_2026_01_19 2026-01-19 3194 2963 76 na GCF_000393715.1 PRJNA224116 SAMN00809101 AJAC00000000.1 na 1158552 1351 Enterococcus faecalis EnGen0234 strain=UAA1180 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA1180_V1 Broad Institute GCA_000393715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/715/GCF_000393715.1_Ente_faec_UAA1180_V1/ na na na haploid bacteria 3021209 3011431 37.500000 0 19 34 NCBI RefSeq GCF_000393715.1-RS_2026_01_16 2026-01-16 2964 2817 58 na GCF_000393735.1 PRJNA224116 SAMN00809102 AJAD00000000.1 na 1158553 1352 Enterococcus faecium EnGen0263 strain=UAA1280 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA1280_V1 Broad Institute GCA_000393735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/735/GCF_000393735.1_Ente_faec_UAA1280_V1/ na na na haploid bacteria 3129965 3111108 37.500000 0 29 50 NCBI RefSeq GCF_000393735.1-RS_2026_01_12 2026-01-12 3059 2916 74 na GCF_000393755.1 PRJNA224116 SAMN00809103 AJAE00000000.1 na 1158554 1352 Enterococcus faecium EnGen0264 strain=UAA1433 na latest Scaffold Major Full 2013-05-14 Ente_faec_UAA1433_V1 Broad Institute GCA_000393755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/755/GCF_000393755.1_Ente_faec_UAA1433_V1/ na na na haploid bacteria 2935430 2896650 38.000000 0 21 52 NCBI RefSeq GCF_000393755.1-RS_2026_01_12 2026-01-12 2871 2697 74 na GCF_000393775.1 PRJNA224116 SAMN00809104 AJAF00000000.1 na 1158555 1352 Enterococcus faecium EnGen0265 strain=UAA1484 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1484_V1 Broad Institute GCA_000393775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/775/GCF_000393775.1_Ente_faec_UAA1484_V1/ na na na haploid bacteria 3203529 3123896 37.500000 0 39 97 NCBI RefSeq GCF_000393775.1-RS_2026_01_19 2026-01-19 3167 2933 78 na GCF_000393795.1 PRJNA224116 SAMN00809105 AJAG00000000.1 na 1158976 1351 Enterococcus faecalis EnGen0235 strain=UAA1489 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1489_V1 Broad Institute GCA_000393795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/795/GCF_000393795.1_Ente_faec_UAA1489_V1/ na na na haploid bacteria 3375017 3360834 37.000000 0 33 51 NCBI RefSeq GCF_000393795.1-RS_2026_01_22 2026-01-22 3359 3193 80 na GCF_000393815.1 PRJNA224116 SAMN00809106 AJAH00000000.1 na 1158598 53346 Enterococcus mundtii ATCC 882 strain=ATCC 882 na latest Scaffold Major Full 2013-05-15 Ente_mund_ATCC882_V1 Broad Institute GCA_000393815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/815/GCF_000393815.1_Ente_mund_ATCC882_V1/ na na na haploid bacteria 3078858 3061524 38.500000 0 14 38 NCBI RefSeq GCF_000393815.1-RS_2026_01_30 2026-01-30 2982 2801 88 na GCF_000393835.1 PRJNA224116 SAMN00809107 AJAI00000000.1 na 768486 1354 Enterococcus hirae ATCC 9790 strain=ATCC 9790 na latest Scaffold Major Full 2013-05-15 Ente_hira_ATCC8043_V1 Broad Institute GCA_000393835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/835/GCF_000393835.1_Ente_hira_ATCC8043_V1/ na assembly from type material na haploid bacteria 2923510 2913874 37.000000 0 14 34 NCBI RefSeq GCF_000393835.1-RS_2025_08_22 2025-08-22 2767 2611 99 na GCF_000393855.1 PRJNA224116 SAMN00809109 AJAJ00000000.1 na 1158600 1352 Enterococcus faecium ATCC 8459 = NRRL B-2354 strain=ATCC 8459 na latest Scaffold Major Full 2013-05-15 Ente_faec_ATCC8459_V1 Broad Institute GCA_000393855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/855/GCF_000393855.1_Ente_faec_ATCC8459_V1/ na na na haploid bacteria 2871323 2845164 38.000000 0 9 26 NCBI RefSeq GCF_000393855.1-RS_2026_04_24 2026-04-24 2802 2616 88 na GCF_000393875.1 PRJNA224116 SAMN00809110 AJAK00000000.1 na 1158601 71451 Enterococcus malodoratus ATCC 43197 strain=ATCC 43197 na latest Scaffold Major Full 2013-05-15 Ente_malo_ATCC43197_V1 Broad Institute GCA_000393875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/875/GCF_000393875.1_Ente_malo_ATCC43197_V1/ na assembly from type material na haploid bacteria 4654237 4610222 40.000000 0 10 34 NCBI RefSeq GCF_000393875.1-RS_2025_08_22 2025-08-22 4541 4430 76 na GCF_000393895.1 PRJNA224116 SAMN00809111 AJAL00000000.1 na 1158602 71452 Enterococcus raffinosus ATCC 49464 strain=ATCC 49464 na latest Scaffold Major Full 2013-05-15 Ente_raff_ATCC49464_V1 Broad Institute GCA_000393895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/895/GCF_000393895.1_Ente_raff_ATCC49464_V1/ na na na haploid bacteria 4294324 4274893 39.500000 0 5 24 NCBI RefSeq GCF_000393895.1-RS_2026_04_29 2026-04-29 4291 4128 84 na GCF_000393915.1 PRJNA224116 SAMN00809112 AJAM00000000.1 na 1158603 37734 Enterococcus casseliflavus ATCC 49996 strain=ATCC 49996 na latest Scaffold Major Full 2013-05-15 Ente_flav_ATCC49996_V1 Broad Institute GCA_000393915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/915/GCF_000393915.1_Ente_flav_ATCC49996_V1/ na assembly from heterotypic synonym type material na haploid bacteria 3590162 3573970 42.500000 0 10 33 NCBI RefSeq GCF_000393915.1-RS_2025_08_22 2025-08-22 3510 3366 76 na GCF_000393935.1 PRJNA224116 SAMN00809113 AJAN00000000.1 na 1158604 112904 Enterococcus villorum ATCC 700913 strain=ATCC 700913 na latest Scaffold Major Full 2013-05-15 Ente_vill_ATCC700913_V1 Broad Institute GCA_000393935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/935/GCF_000393935.1_Ente_vill_ATCC700913_V1/ na assembly from heterotypic synonym type material na haploid bacteria 3080759 3058438 35.000000 0 19 49 NCBI RefSeq GCF_000393935.1-RS_2025_08_22 2025-08-22 2884 2699 73 na GCF_000393955.1 PRJNA224116 SAMN00809115 AJAP00000000.1 na 1158606 57732 Enterococcus asini ATCC 700915 strain=ATCC 700915 na latest Scaffold Major Full 2013-05-15 Ente_asin_ATCC700915_V1 Broad Institute GCA_000393955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/955/GCF_000393955.1_Ente_asin_ATCC700915_V1/ na assembly from type material na haploid bacteria 2598724 2558756 44.500000 0 11 31 NCBI RefSeq GCF_000393955.1-RS_2025_08_22 2025-08-22 2483 2404 49 na GCF_000393975.1 PRJNA224116 SAMN00809116 AJAQ00000000.1 reference genome 1158607 160454 Enterococcus pallens ATCC BAA-351 strain=ATCC BAA-351 na latest Scaffold Major Full 2013-05-15 Ente_pall_BAA-351_V1 Broad Institute GCA_000393975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/975/GCF_000393975.1_Ente_pall_BAA-351_V1/ na assembly from type material na haploid bacteria 5490614 5437682 40.000000 0 14 57 NCBI RefSeq GCF_000393975.1-RS_2026_05_02 2026-05-02 5345 5206 88 na GCF_000393995.1 PRJNA224116 SAMN00809117 AJAR00000000.1 reference genome 1158608 155618 Enterococcus haemoperoxidus ATCC BAA-382 strain=ATCC BAA-382 na latest Scaffold Major Full 2013-05-15 Ente_haem_BAA-382_V1 Broad Institute GCA_000393995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/393/995/GCF_000393995.1_Ente_haem_BAA-382_V1/ na assembly from type material na haploid bacteria 3580916 3556220 35.500000 0 3 31 NCBI RefSeq GCF_000393995.1-RS_2026_04_26 2026-04-26 3274 3174 75 na GCF_000394015.1 PRJNA224116 SAMN00809118 AJAS00000000.1 reference genome 1158609 155617 Enterococcus moraviensis ATCC BAA-383 strain=ATCC BAA-383 na latest Scaffold Major Full 2013-05-15 Ente_mora_BAA-383_V1 Broad Institute GCA_000394015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/015/GCF_000394015.1_Ente_mora_BAA-383_V1/ na assembly from type material na haploid bacteria 3601841 3591973 36.000000 0 6 28 NCBI RefSeq GCF_000394015.1-RS_2026_04_26 2026-04-26 3384 3293 70 na GCF_000394035.1 PRJNA224116 SAMN00809120 AJAT00000000.1 reference genome 1158610 154621 Enterococcus phoeniculicola ATCC BAA-412 strain=ATCC BAA-412 na latest Scaffold Major Full 2013-05-15 Ente_phoe_BAA-412_V1 Broad Institute GCA_000394035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/035/GCF_000394035.1_Ente_phoe_BAA-412_V1/ na assembly from type material na haploid bacteria 3931286 3921813 36.500000 0 9 25 NCBI RefSeq GCF_000394035.1-RS_2026_05_02 2026-05-02 3580 3469 71 na GCF_000394055.1 PRJNA224116 SAMN00809121 AJAU00000000.1 reference genome 1158612 317735 Enterococcus caccae ATCC BAA-1240 strain=ATCC BAA-1240 na latest Scaffold Major Full 2013-05-15 Ente_cocc_BAA-1240_V1 Broad Institute GCA_000394055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/055/GCF_000394055.1_Ente_cocc_BAA-1240_V1/ na assembly from type material na haploid bacteria 3559587 3544970 36.000000 0 4 24 NCBI RefSeq GCF_000394055.1-RS_2026_05_02 2026-05-02 3319 3221 70 na GCF_000394075.1 PRJNA224116 SAMN00809123 AJAW00000000.1 na 1158618 1351 Enterococcus faecalis EnGen0237 strain=SF24397 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF24397_V1 Broad Institute GCA_000394075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/075/GCF_000394075.1_Ente_faec_SF24397_V1/ na na na haploid bacteria 3145168 3129363 37.500000 0 29 46 NCBI RefSeq GCF_000394075.1-RS_2026_01_20 2026-01-20 3130 2980 66 na GCF_000394095.1 PRJNA224116 SAMN00809124 AJAX00000000.1 na 1158619 1351 Enterococcus faecalis EnGen0238 strain=SF24413 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF24413_V1 Broad Institute GCA_000394095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/095/GCF_000394095.1_Ente_faec_SF24413_V1/ na na na haploid bacteria 3196307 3190731 37.500000 0 27 37 NCBI RefSeq GCF_000394095.1-RS_2026_01_20 2026-01-20 3176 3038 67 na GCF_000394115.1 PRJNA224116 SAMN00809125 AJAY00000000.1 na 1158620 1351 Enterococcus faecalis EnGen0239 strain=SF26630 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF26630_V1 Broad Institute GCA_000394115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/115/GCF_000394115.1_Ente_faec_SF26630_V1/ na na na haploid bacteria 3200605 3192023 37.500000 0 13 27 NCBI RefSeq GCF_000394115.1-RS_2026_01_20 2026-01-20 3203 3062 73 na GCF_000394135.1 PRJNA224116 SAMN00809126 AJAZ00000000.1 na 1158621 1351 Enterococcus faecalis EnGen0240 strain=SS-6 na latest Scaffold Major Full 2013-05-15 Ente_faec_SS-6_V1 Broad Institute GCA_000394135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/135/GCF_000394135.1_Ente_faec_SS-6_V1/ na na na haploid bacteria 2958774 2949970 37.500000 0 6 16 NCBI RefSeq GCF_000394135.1-RS_2026_01_12 2026-01-12 2891 2754 83 na GCF_000394155.1 PRJNA224116 SAMN00809127 AJBA00000000.1 na 1158622 1351 Enterococcus faecalis EnGen0241 strain=FA2-2 na latest Scaffold Major Full 2013-05-15 Ente_faec_FA2-2_V1 Broad Institute GCA_000394155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/155/GCF_000394155.1_Ente_faec_FA2-2_V1/ na na na haploid bacteria 2890564 2888561 37.500000 0 4 12 NCBI RefSeq GCF_000394155.1-RS_2026_01_12 2026-01-12 2813 2668 72 na GCF_000394175.1 PRJNA224116 SAMN00809128 AJBB00000000.1 na 1158623 1351 Enterococcus faecalis EnGen0242 strain=V587 na latest Scaffold Major Full 2013-05-15 Ente_faec_V587_V1 Broad Institute GCA_000394175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/175/GCF_000394175.1_Ente_faec_V587_V1/ na na na haploid bacteria 3329663 3304130 37.500000 0 25 48 NCBI RefSeq GCF_000394175.1-RS_2026_01_22 2026-01-22 3330 3164 89 na GCF_000394195.1 PRJNA224116 SAMN00809129 AJBC00000000.1 na 1158624 1351 Enterococcus faecalis EnGen0243 strain=SF28073 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF28073_V1 Broad Institute GCA_000394195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/195/GCF_000394195.1_Ente_faec_SF28073_V1/ na na na haploid bacteria 3197024 3193360 37.000000 0 45 53 NCBI RefSeq GCF_000394195.1-RS_2026_01_21 2026-01-21 3206 3045 67 na GCF_000394215.1 PRJNA224116 SAMN00809131 AJBD00000000.1 na 1158625 1351 Enterococcus faecalis EnGen0244 strain=RM4679 na latest Scaffold Major Full 2013-05-15 Ente_faec_RM4679_V1 Broad Institute GCA_000394215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/215/GCF_000394215.1_Ente_faec_RM4679_V1/ na na na haploid bacteria 3225984 3204152 37.000000 0 11 29 NCBI RefSeq GCF_000394215.1-RS_2026_01_20 2026-01-20 3193 3036 79 na GCF_000394235.1 PRJNA224116 SAMN00809132 AJBE00000000.1 na 1158626 1351 Enterococcus faecalis EnGen0245 strain=T14 na latest Scaffold Major Full 2013-05-15 Ente_faec_T14_V1 Broad Institute GCA_000394235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/235/GCF_000394235.1_Ente_faec_T14_V1/ na na na haploid bacteria 3086709 3079167 37.500000 0 8 23 NCBI RefSeq GCF_000394235.1-RS_2026_01_12 2026-01-12 3010 2864 78 na GCF_000394255.1 PRJNA224116 SAMN00809133 AJBF00000000.1 na 1158627 1351 Enterococcus faecalis EnGen0246 strain=CH19 na latest Scaffold Major Full 2013-05-15 Ente_faec_CH19_V1 Broad Institute GCA_000394255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/255/GCF_000394255.1_Ente_faec_CH19_V1/ na na na haploid bacteria 3186993 3176873 37.500000 0 10 29 NCBI RefSeq GCF_000394255.1-RS_2026_01_20 2026-01-20 3158 2988 90 na GCF_000394275.1 PRJNA224116 SAMN00809134 AJBG00000000.1 na 1158628 1351 Enterococcus faecalis EnGen0247 strain=WH257 na latest Scaffold Major Full 2013-05-15 Ente_faec_WH257_V1 Broad Institute GCA_000394275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/275/GCF_000394275.1_Ente_faec_WH257_V1/ na na na haploid bacteria 3284814 3261676 37.000000 0 34 51 NCBI RefSeq GCF_000394275.1-RS_2026_01_20 2026-01-20 3289 3128 84 na GCF_000394295.1 PRJNA224116 SAMN00809135 AJBH00000000.1 na 1158629 1351 Enterococcus faecalis EnGen0248 strain=SF19 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF19_V1 Broad Institute GCA_000394295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/295/GCF_000394295.1_Ente_faec_SF19_V1/ na na na haploid bacteria 3199896 3186767 37.000000 0 21 37 NCBI RefSeq GCF_000394295.1-RS_2026_01_20 2026-01-20 3148 3006 78 na GCF_000394315.1 PRJNA224116 SAMN00809136 AJBI00000000.1 na 1158630 1351 Enterococcus faecalis EnGen0252 strain=SF1592 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF1592_V1 Broad Institute GCA_000394315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/315/GCF_000394315.1_Ente_faec_SF1592_V1/ na na na haploid bacteria 3226726 3201354 37.000000 0 20 43 NCBI RefSeq GCF_000394315.1-RS_2026_01_20 2026-01-20 3197 3052 65 na GCF_000394335.1 PRJNA224116 SAMN00809137 AJBJ00000000.1 na 1158631 1351 Enterococcus faecalis EnGen0251 strain=WH571 na latest Scaffold Major Full 2013-05-15 Ente_faec_WH571_V1 Broad Institute GCA_000394335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/335/GCF_000394335.1_Ente_faec_WH571_V1/ na na na haploid bacteria 3283528 3260119 37.000000 0 30 47 NCBI RefSeq GCF_000394335.1-RS_2026_01_20 2026-01-20 3283 3105 92 na GCF_000394355.1 PRJNA224116 SAMN00809138 AJBK00000000.1 na 1158632 1351 Enterococcus faecalis EnGen0231 strain=B5035 na latest Scaffold Major Full 2013-05-15 Ente_faec_B5035_V1 Broad Institute GCA_000394355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/355/GCF_000394355.1_Ente_faec_B5035_V1/ na na na haploid bacteria 3281177 3263887 37.000000 0 44 59 NCBI RefSeq GCF_000394355.1-RS_2026_01_20 2026-01-20 3281 3135 68 na GCF_000394375.1 PRJNA224116 SAMN00809139 AJBL00000000.1 na 1158633 1351 Enterococcus faecalis EnGen0249 strain=Com 2 na latest Scaffold Major Full 2013-05-15 Ente_faec_Com_2_V1 Broad Institute GCA_000394375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/375/GCF_000394375.1_Ente_faec_Com_2_V1/ na na na haploid bacteria 3030575 3021069 37.500000 0 6 18 NCBI RefSeq GCF_000394375.1-RS_2026_01_12 2026-01-12 2924 2790 81 na GCF_000394395.1 PRJNA224116 SAMN00809140 AJBM00000000.1 na 1158634 1351 Enterococcus faecalis EnGen0250 strain=Com 6 na latest Scaffold Major Full 2013-05-15 Ente_faec_Com_6_V1 Broad Institute GCA_000394395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/395/GCF_000394395.1_Ente_faec_Com_6_V1/ na na na haploid bacteria 2820203 2816046 37.500000 0 3 12 NCBI RefSeq GCF_000394395.1-RS_2026_01_12 2026-01-12 2706 2602 73 na GCF_000394415.1 PRJNA224116 SAMN00809142 AJBN00000000.1 na 1158635 1352 Enterococcus faecium EnGen0267 strain=UAA210 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA210_V1 Broad Institute GCA_000394415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/415/GCF_000394415.1_Ente_faec_UAA210_V1/ na na na haploid bacteria 2696416 2683731 38.000000 0 17 36 NCBI RefSeq GCF_000394415.1-RS_2026_01_20 2026-01-20 2653 2407 123 na GCF_000394435.1 PRJNA224116 SAMN00809199 AJDG00000000.1 na 1158636 1352 Enterococcus faecium EnGen0313 strain=UAA407 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA407pIP819_pIP820_V1 Broad Institute GCA_000394435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/435/GCF_000394435.1_Ente_faec_UAA407pIP819_pIP820_V1/ na na na haploid bacteria 2923389 2897788 38.000000 0 26 48 NCBI RefSeq GCF_000394435.1-RS_2026_01_21 2026-01-21 2909 2668 86 na GCF_000394455.1 PRJNA224116 SAMN00809221 AJDH00000000.1 na 1158637 1351 Enterococcus faecalis EnGen0299 strain=UAA409 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA409pIP819_V1 Broad Institute GCA_000394455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/455/GCF_000394455.1_Ente_faec_UAA409pIP819_V1/ na na na haploid bacteria 2933731 2919817 37.500000 0 11 20 NCBI RefSeq GCF_000394455.1-RS_2026_01_12 2026-01-12 2865 2702 77 na GCF_000394475.1 PRJNA224116 SAMN00809232 AJDI00000000.1 na 1158638 1352 Enterococcus faecium EnGen0315 strain=UAA430 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA430_V1 Broad Institute GCA_000394475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/475/GCF_000394475.1_Ente_faec_UAA430_V1/ na na na haploid bacteria 2676325 2655645 38.000000 0 16 38 NCBI RefSeq GCF_000394475.1-RS_2026_01_20 2026-01-20 2598 2431 75 na GCF_000394495.1 PRJNA224116 SAMN00809241 AJDJ00000000.1 na 1158639 1352 Enterococcus faecium EnGen0317 strain=UAA431 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA431_V1 Broad Institute GCA_000394495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/495/GCF_000394495.1_Ente_faec_UAA431_V1/ na na na haploid bacteria 2782341 2766299 38.000000 0 21 47 NCBI RefSeq GCF_000394495.1-RS_2026_01_22 2026-01-22 2757 2521 77 na GCF_000394515.1 PRJNA224116 SAMN00809242 AJDK00000000.1 na 1158640 1351 Enterococcus faecalis EnGen0301 strain=UAA702 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA702_V1 Broad Institute GCA_000394515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/515/GCF_000394515.1_Ente_faec_UAA702_V1/ na na na haploid bacteria 3127610 3123368 37.000000 0 10 20 NCBI RefSeq GCF_000394515.1-RS_2026_01_12 2026-01-12 3046 2889 81 na GCF_000394535.1 PRJNA224116 SAMN00809243 AJDL00000000.1 na 1158641 1352 Enterococcus faecium EnGen0305 strain=EnGen0305 na latest Scaffold Major Full 2013-05-15 Ente_faec_EnGen0305_V1 Broad Institute GCA_000394535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/535/GCF_000394535.1_Ente_faec_EnGen0305_V1/ na na na haploid bacteria 2811075 2765394 38.000000 0 19 54 NCBI RefSeq GCF_000394535.1-RS_2026_01_22 2026-01-22 2715 2496 70 na GCF_000394555.1 PRJNA224116 SAMN00809244 AJDM00000000.1 na 1158642 1352 Enterococcus faecium EnGen0308 strain=EnGen0308 na latest Scaffold Major Full 2013-05-15 Ente_faec_EnGen0308_V1 Broad Institute GCA_000394555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/555/GCF_000394555.1_Ente_faec_EnGen0308_V1/ na na na haploid bacteria 2521468 2507136 38.500000 0 16 36 NCBI RefSeq GCF_000394555.1-RS_2026_01_24 2026-01-24 2486 2280 98 na GCF_000394575.1 PRJNA224116 SAMN00809200 AJDO00000000.1 na 1158644 1352 Enterococcus faecium EnGen0320 strain=UAA949 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA949_V1 Broad Institute GCA_000394575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/575/GCF_000394575.1_Ente_faec_UAA949_V1/ na na na haploid bacteria 2861697 2831804 38.000000 0 21 55 NCBI RefSeq GCF_000394575.1-RS_2026_01_16 2026-01-16 2868 2702 74 na GCF_000394595.1 PRJNA224116 SAMN00809201 AJDP00000000.1 na 1158645 1352 Enterococcus faecium EnGen0322 strain=UAA950 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA950_V1 Broad Institute GCA_000394595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/595/GCF_000394595.1_Ente_faec_UAA950_V1/ na na na haploid bacteria 3047759 3021213 37.500000 0 27 57 NCBI RefSeq GCF_000394595.1-RS_2026_01_12 2026-01-12 3082 2882 92 na GCF_000394615.1 PRJNA224116 SAMN00809202 AJDQ00000000.1 na 1158614 160453 Enterococcus gilvus ATCC BAA-350 strain=ATCC BAA-350 na latest Scaffold Major Full 2013-05-15 Ente_gilf_BAA-350_PQ1_CCUG_45553_V1 Broad Institute GCA_000394615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/615/GCF_000394615.1_Ente_gilf_BAA-350_PQ1_CCUG_45553_V1/ na assembly from type material na haploid bacteria 4162144 4154933 41.500000 0 25 34 NCBI RefSeq GCF_000394615.1-RS_2025_08_22 2025-08-22 4194 4063 85 na GCF_000394635.1 PRJNA224116 SAMN00809203 AJDR00000000.1 na 1158646 1352 Enterococcus faecium EnGen0314 strain=Efm_NY1-1 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-1_V1 Broad Institute GCA_000394635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/635/GCF_000394635.1_Ente_faec_Efm_NY1-1_V1/ na na na haploid bacteria 3152555 3067492 37.500000 0 27 106 NCBI RefSeq GCF_000394635.1-RS_2025_12_26 2025-12-26 3129 2882 85 na GCF_000394655.1 PRJNA224116 SAMN00809204 AJDS00000000.1 na 1158647 1352 Enterococcus faecium EnGen0316 strain=Efm_NY1-2 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-2_V1 Broad Institute GCA_000394655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/655/GCF_000394655.1_Ente_faec_Efm_NY1-2_V1/ na na na haploid bacteria 3138515 3053019 37.500000 0 29 91 NCBI RefSeq GCF_000394655.1-RS_2025_12_26 2025-12-26 3077 2876 63 na GCF_000394675.1 PRJNA224116 SAMN00809205 AJDT00000000.1 na 1158648 1352 Enterococcus faecium EnGen0318 strain=Efm_NY1-3 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-3_V1 Broad Institute GCA_000394675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/675/GCF_000394675.1_Ente_faec_Efm_NY1-3_V1/ na na na haploid bacteria 3146550 3076320 37.500000 0 23 84 NCBI RefSeq GCF_000394675.1-RS_2025_12_26 2025-12-26 3104 2889 80 na GCF_000394695.1 PRJNA224116 SAMN00809206 AJDU00000000.1 na 1158649 1352 Enterococcus faecium EnGen0319 strain=Efm_NY1-4 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-4_V1 Broad Institute GCA_000394695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/695/GCF_000394695.1_Ente_faec_Efm_NY1-4_V1/ na na na haploid bacteria 3159691 3062168 37.500000 0 28 99 NCBI RefSeq GCF_000394695.1-RS_2025_12_26 2025-12-26 3071 2845 81 na GCF_000394715.1 PRJNA224116 SAMN00809207 AJDV00000000.1 na 1158650 1352 Enterococcus faecium EnGen0321 strain=Efm_NY1-5 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-5_V1 Broad Institute GCA_000394715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/715/GCF_000394715.1_Ente_faec_Efm_NY1-5_V1/ na na na haploid bacteria 3184985 3099328 37.500000 0 27 82 NCBI RefSeq GCF_000394715.1-RS_2026_01_18 2026-01-18 3108 2891 79 na GCF_000394735.1 PRJNA224116 SAMN00809208 AJDW00000000.1 na 1158651 1352 Enterococcus faecium EnGen0323 strain=Efm_NY1-6 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY1-6_V1 Broad Institute GCA_000394735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/735/GCF_000394735.1_Ente_faec_Efm_NY1-6_V1/ na na na haploid bacteria 3185918 3117757 37.500000 0 32 95 NCBI RefSeq GCF_000394735.1-RS_2026_01_19 2026-01-19 3153 2924 83 na GCF_000394755.1 PRJNA224116 SAMN00809209 AJDX00000000.1 na 1158652 1352 Enterococcus faecium EnGen0312 strain=Efm_NY3-1 na latest Scaffold Major Full 2013-05-15 Ente_faec_Efm_NY3-1_V1 Broad Institute GCA_000394755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/755/GCF_000394755.1_Ente_faec_Efm_NY3-1_V1/ na na na haploid bacteria 3192638 3145670 37.500000 0 31 83 NCBI RefSeq GCF_000394755.1-RS_2026_01_18 2026-01-18 3167 2940 83 na GCF_000394775.1 PRJNA224116 SAMN00809211 AJDY00000000.1 na 491075 1351 Enterococcus faecalis EnGen0297 strain=HH22 na latest Scaffold Major Full 2013-05-15 Ente_faec_HH22_V1 Broad Institute GCA_000394775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/775/GCF_000394775.1_Ente_faec_HH22_V1/ na na na haploid bacteria 3111687 3095401 37.000000 0 36 57 NCBI RefSeq GCF_000394775.1-RS_2026_01_14 2026-01-14 3063 2927 62 na GCF_000394795.1 PRJNA224116 SAMN00809212 AJDZ00000000.1 na 1158653 1351 Enterococcus faecalis EnGen0310 = MMH594 strain=MMH594 na latest Scaffold Major Full 2013-05-15 Ente_faec_MMH594_V1 Broad Institute GCA_000394795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/795/GCF_000394795.1_Ente_faec_MMH594_V1/ na na na haploid bacteria 3255593 3244270 37.000000 0 25 39 NCBI RefSeq GCF_000394795.1-RS_2026_01_20 2026-01-20 3252 3116 70 na GCF_000394815.1 PRJNA224116 SAMN00809213 AJEA00000000.1 na 1158654 1351 Enterococcus faecalis EnGen0294 strain=SF100 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF100_V1 Broad Institute GCA_000394815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/815/GCF_000394815.1_Ente_faec_SF100_V1/ na na na haploid bacteria 3203166 3189678 37.000000 0 16 33 NCBI RefSeq GCF_000394815.1-RS_2026_01_20 2026-01-20 3154 3022 65 na GCF_000394835.1 PRJNA224116 SAMN00809214 AJEB00000000.1 na 1158655 1351 Enterococcus faecalis EnGen0307 strain=SF370 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF370_V1 Broad Institute GCA_000394835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/835/GCF_000394835.1_Ente_faec_SF370_V1/ na na na haploid bacteria 3189914 3171686 37.000000 0 19 40 NCBI RefSeq GCF_000394835.1-RS_2026_01_20 2026-01-20 3153 3009 84 na GCF_000394855.1 PRJNA224116 SAMN00809215 AJEC00000000.1 na 1158656 1351 Enterococcus faecalis EnGen0280 strain=CH570 na latest Scaffold Major Full 2013-05-15 Ente_faec_CH570_V1 Broad Institute GCA_000394855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/855/GCF_000394855.1_Ente_faec_CH570_V1/ na na na haploid bacteria 3246693 3217946 37.000000 0 16 31 NCBI RefSeq GCF_000394855.1-RS_2026_01_20 2026-01-20 3227 3074 75 na GCF_000394875.1 PRJNA224116 SAMN00809216 AJED00000000.1 na 1158657 1351 Enterococcus faecalis EnGen0303 strain=Ned10 na latest Scaffold Major Full 2013-05-15 Ente_faec_Ned10_V1 Broad Institute GCA_000394875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/875/GCF_000394875.1_Ente_faec_Ned10_V1/ na na na haploid bacteria 3161629 3154839 37.000000 0 18 32 NCBI RefSeq GCF_000394875.1-RS_2026_01_20 2026-01-20 3121 2959 82 na GCF_000394895.1 PRJNA224116 SAMN00809217 AJEE00000000.1 na 1158658 1351 Enterococcus faecalis EnGen0298 strain=SF105 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF105_V1 Broad Institute GCA_000394895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/895/GCF_000394895.1_Ente_faec_SF105_V1/ na na na haploid bacteria 3262104 3246760 37.000000 0 35 54 NCBI RefSeq GCF_000394895.1-RS_2026_01_21 2026-01-21 3260 3113 61 na GCF_000394915.1 PRJNA224116 SAMN00809218 AJEF00000000.1 na 749509 1351 Enterococcus faecalis EnGen0311 strain=WH245 na latest Scaffold Major Full 2013-05-15 Ente_faec_WH245_V1 Broad Institute GCA_000394915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/915/GCF_000394915.1_Ente_faec_WH245_V1/ na na na haploid bacteria 3250986 3234528 37.000000 0 26 39 NCBI RefSeq GCF_000394915.1-RS_2026_01_20 2026-01-20 3253 3072 104 na GCF_000394935.1 PRJNA224116 SAMN00809219 AJEG00000000.1 na 1158660 1351 Enterococcus faecalis EnGen0302 strain=CH116 na latest Scaffold Major Full 2013-05-15 Ente_faec_CH116_V1 Broad Institute GCA_000394935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/935/GCF_000394935.1_Ente_faec_CH116_V1/ na na na haploid bacteria 3196194 3183563 37.500000 0 6 26 NCBI RefSeq GCF_000394935.1-RS_2026_01_20 2026-01-20 3165 2987 97 na GCF_000394955.1 PRJNA224116 SAMN00809220 AJEH00000000.1 na 1158661 1351 Enterococcus faecalis EnGen0306 strain=CH136 na latest Scaffold Major Full 2013-05-15 Ente_faec_CH136_V1 Broad Institute GCA_000394955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/955/GCF_000394955.1_Ente_faec_CH136_V1/ na na na haploid bacteria 3222352 3202920 37.000000 0 20 41 NCBI RefSeq GCF_000394955.1-RS_2026_01_21 2026-01-21 3209 3039 81 na GCF_000394975.1 PRJNA224116 SAMN00809222 AJEI00000000.1 na 1158662 1351 Enterococcus faecalis EnGen0291 strain=T16 na latest Scaffold Major Full 2013-05-15 Ente_faec_T16_V1 Broad Institute GCA_000394975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/975/GCF_000394975.1_Ente_faec_T16_V1/ na na na haploid bacteria 2872525 2865998 37.500000 0 11 18 NCBI RefSeq GCF_000394975.1-RS_2026_01_12 2026-01-12 2835 2712 56 na GCF_000394995.1 PRJNA224116 SAMN00809223 AJEJ00000000.1 na 1158663 1351 Enterococcus faecalis EnGen0282 strain=T13 na latest Scaffold Major Full 2013-05-15 Ente_faec_T13_V1 Broad Institute GCA_000394995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/394/995/GCF_000394995.1_Ente_faec_T13_V1/ na na na haploid bacteria 2775355 2769054 37.500000 0 3 15 NCBI RefSeq GCF_000394995.1-RS_2026_01_19 2026-01-19 2677 2580 71 na GCF_000395015.1 PRJNA224116 SAMN00809224 AJEK00000000.1 na 525271 1351 Enterococcus faecalis ATCC 29200 strain=ATCC 29200 na latest Scaffold Major Full 2013-05-15 Ente_faec_ATCC_29200_V1 Broad Institute GCA_000395015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/015/GCF_000395015.1_Ente_faec_ATCC_29200_V1/ na na na haploid bacteria 3014576 3008657 37.500000 0 15 28 NCBI RefSeq GCF_000395015.1-RS_2026_01_12 2026-01-12 2938 2797 79 na GCF_000395035.1 PRJNA224116 SAMN00809225 AJEL00000000.1 na 1158664 1351 Enterococcus faecalis EnGen0279 strain=12107 na latest Scaffold Major Full 2013-05-15 Ente_faec_12107_V1 Broad Institute GCA_000395035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/035/GCF_000395035.1_Ente_faec_12107_V1/ na na na haploid bacteria 2885797 2874450 37.500000 0 9 24 NCBI RefSeq GCF_000395035.1-RS_2026_01_12 2026-01-12 2813 2684 91 na GCF_000395055.1 PRJNA224116 SAMN00809226 AJEM00000000.1 na 1158665 1351 Enterococcus faecalis EnGen0304 strain=SF24396 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF24396_V1 Broad Institute GCA_000395055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/055/GCF_000395055.1_Ente_faec_SF24396_V1/ na na na haploid bacteria 2816993 2810696 37.500000 0 3 12 NCBI RefSeq GCF_000395055.1-RS_2026_01_12 2026-01-12 2743 2612 78 na GCF_000395075.1 PRJNA224116 SAMN00809227 AJEN00000000.1 na 1158666 1351 Enterococcus faecalis EnGen0281 strain=Pan7 na latest Scaffold Major Full 2013-05-15 Ente_faec_Pan7_V1 Broad Institute GCA_000395075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/075/GCF_000395075.1_Ente_faec_Pan7_V1/ na na na haploid bacteria 2955493 2949943 37.500000 0 4 12 NCBI RefSeq GCF_000395075.1-RS_2026_01_12 2026-01-12 2913 2763 88 na GCF_000395095.1 PRJNA224116 SAMN00809228 AJEO00000000.1 na 1158667 1351 Enterococcus faecalis EnGen0287 strain=YI6-1 na latest Scaffold Major Full 2013-05-15 Ente_faec_YI6-1_V1 Broad Institute GCA_000395095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/095/GCF_000395095.1_Ente_faec_YI6-1_V1/ na na na haploid bacteria 3030328 3020318 37.500000 0 5 15 NCBI RefSeq GCF_000395095.1-RS_2026_01_12 2026-01-12 2926 2794 77 na GCF_000395115.1 PRJNA224116 SAMN00809229 AJEP00000000.1 na 1158668 1351 Enterococcus faecalis EnGen0300 strain=SF21521 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF21521_V1 Broad Institute GCA_000395115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/115/GCF_000395115.1_Ente_faec_SF21521_V1/ na na na haploid bacteria 3262332 3240015 37.000000 0 53 73 NCBI RefSeq GCF_000395115.1-RS_2026_01_21 2026-01-21 3266 3116 66 na GCF_000395135.1 PRJNA224116 SAMN00809230 AJEQ00000000.1 na 1158669 1351 Enterococcus faecalis EnGen0295 strain=T21 na latest Scaffold Major Full 2013-05-15 Ente_faec_T21_V1 Broad Institute GCA_000395135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/135/GCF_000395135.1_Ente_faec_T21_V1/ na na na haploid bacteria 2958861 2951749 37.500000 0 4 13 NCBI RefSeq GCF_000395135.1-RS_2026_01_12 2026-01-12 2863 2722 75 na GCF_000395175.1 PRJNA224116 SAMN00809233 AJES00000000.1 na 1158671 1351 Enterococcus faecalis EnGen0284 strain=Com1 na latest Scaffold Major Full 2013-05-15 Ente_faec_Com1_V1 Broad Institute GCA_000395175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/175/GCF_000395175.1_Ente_faec_Com1_V1/ na na na haploid bacteria 3017552 3011181 37.000000 0 8 22 NCBI RefSeq GCF_000395175.1-RS_2026_01_12 2026-01-12 2917 2787 76 na GCF_000395205.1 PRJNA224116 SAMN00809235 AJEU00000000.1 na 1158673 1351 Enterococcus faecalis EnGen0293 strain=E1 na latest Scaffold Major Full 2013-05-15 Ente_faec_E1_V1 Broad Institute GCA_000395205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/205/GCF_000395205.1_Ente_faec_E1_V1/ na na na haploid bacteria 3105472 3093321 37.500000 0 16 31 NCBI RefSeq GCF_000395205.1-RS_2026_01_12 2026-01-12 3053 2900 77 na GCF_000395245.1 PRJNA224116 SAMN00809237 AJEW00000000.1 na 1158675 1351 Enterococcus faecalis ATCC 27275 strain=ATCC 27275 na latest Scaffold Major Full 2013-05-15 Ente_faec_ATCC_27275_V1 Broad Institute GCA_000395245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/245/GCF_000395245.1_Ente_faec_ATCC_27275_V1/ na na na haploid bacteria 3001136 2994754 37.500000 0 8 22 NCBI RefSeq GCF_000395245.1-RS_2026_01_12 2026-01-12 2907 2778 69 na GCF_000395265.1 PRJNA224116 SAMN00809238 AJEX00000000.1 na 1158676 1351 Enterococcus faecalis ATCC 27959 strain=ATCC 27959 na latest Scaffold Major Full 2013-05-15 Ente_faec_ATCC_27959_V1 Broad Institute GCA_000395265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/265/GCF_000395265.1_Ente_faec_ATCC_27959_V1/ na na na haploid bacteria 2943933 2931436 37.500000 0 2 19 NCBI RefSeq GCF_000395265.1-RS_2026_01_12 2026-01-12 2826 2722 50 na GCF_000395285.1 PRJNA224116 SAMN00809239 AJEY00000000.1 na 1158677 1351 Enterococcus faecalis EnGen0289 strain=DS16 na latest Scaffold Major Full 2013-05-15 Ente_faec_DS16_V1 Broad Institute GCA_000395285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/285/GCF_000395285.1_Ente_faec_DS16_V1/ na na na haploid bacteria 2919956 2911323 37.500000 0 10 24 NCBI RefSeq GCF_000395285.1-RS_2026_01_12 2026-01-12 2812 2694 80 na GCF_000395305.1 PRJNA224116 SAMN00809240 AJEZ00000000.1 na 1158678 1351 Enterococcus faecalis EnGen0285 strain=RC73 na latest Scaffold Major Full 2013-05-15 Ente_faec_RC73_V1 Broad Institute GCA_000395305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/305/GCF_000395305.1_Ente_faec_RC73_V1/ na na na haploid bacteria 3152997 3139216 37.500000 0 21 36 NCBI RefSeq GCF_000395305.1-RS_2026_01_20 2026-01-20 3092 2949 81 na GCF_000395345.1 PRJNA224116 SAMN02469612 AQPL00000000.1 na 1312922 1312922 Cupriavidus sp. WS strain=WS na latest Contig Major Full 2013-05-15 CupWS1.0 College of Life Science, Zhejiang University, GCA_000395345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/345/GCF_000395345.1_CupWS1.0/ na na na haploid bacteria 7893008 7893008 68.500000 0 785 785 NCBI RefSeq GCF_000395345.1-RS_2024_08_13 2024-08-13 7540 7260 64 na GCF_000395365.1 PRJNA224116 SAMN00839772 ASEO00000000.1 na 1169252 1351 Enterococcus faecalis EnGen0335 strain=SF5039 na latest Scaffold Major Full 2013-05-15 Ente_faec_SF5039_V1 Broad Institute GCA_000395365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/365/GCF_000395365.1_Ente_faec_SF5039_V1/ na na na haploid bacteria 3224059 3220569 37.500000 0 18 28 NCBI RefSeq GCF_000395365.1-RS_2026_01_22 2026-01-22 3195 3004 90 na GCF_000395385.1 PRJNA224116 SAMN00809236 AJEV00000000.1 na 1158674 1351 Enterococcus faecalis EnGen0290 strain=RM3817 na latest Scaffold Major Full 2013-05-15 Ente_faec_RM3817_V1 Broad Institute GCA_000395385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/385/GCF_000395385.1_Ente_faec_RM3817_V1/ na na na haploid bacteria 3065237 3048407 37.500000 0 12 25 NCBI RefSeq GCF_000395385.1-RS_2026_01_12 2026-01-12 2981 2840 75 na GCF_000395405.1 PRJNA224116 SAMN00809231 AJER00000000.1 na 1158670 1351 Enterococcus faecalis EnGen0283 strain=5952 na latest Scaffold Major Full 2013-05-15 Ente_faec_5952_V1 Broad Institute GCA_000395405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/405/GCF_000395405.1_Ente_faec_5952_V1/ na na na haploid bacteria 3097836 3093775 37.500000 0 13 24 NCBI RefSeq GCF_000395405.1-RS_2026_01_12 2026-01-12 3026 2884 61 na GCF_000395425.1 PRJNA224116 SAMN00808982 AIUD00000000.1 na 1157451 1352 Enterococcus faecium EnGen0156 strain=S658-3 na latest Scaffold Major Full 2013-05-15 Ente_faec_S658-3_V1 Broad Institute GCA_000395425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/425/GCF_000395425.1_Ente_faec_S658-3_V1/ na na na haploid bacteria 2621011 2597415 38.000000 0 7 31 NCBI RefSeq GCF_000395425.1-RS_2026_01_20 2026-01-20 2529 2343 73 na GCF_000395445.1 PRJNA224116 SAMN00808984 AIUF00000000.1 na 1157453 1352 Enterococcus faecium EnGen0158 strain=UAA714 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA714_V1 Broad Institute GCA_000395445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/445/GCF_000395445.1_Ente_faec_UAA714_V1/ na na na haploid bacteria 2818139 2796467 38.000000 0 24 51 NCBI RefSeq GCF_000395445.1-RS_2026_01_22 2026-01-22 2789 2575 62 na GCF_000395465.1 PRJNA224116 SAMN00808985 AIUG00000000.1 na 1157454 1352 Enterococcus faecium EnGen0159 strain=UAA715 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA715_V1 Broad Institute GCA_000395465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/465/GCF_000395465.1_Ente_faec_UAA715_V1/ na na na haploid bacteria 2817580 2798809 38.000000 0 27 58 NCBI RefSeq GCF_000395465.1-RS_2026_01_22 2026-01-22 2794 2558 78 na GCF_000395485.1 PRJNA224116 SAMN00808986 AIUH00000000.1 na 1157455 1352 Enterococcus faecium EnGen0160 strain=UAA716 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA716_V1 Broad Institute GCA_000395485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/485/GCF_000395485.1_Ente_faec_UAA716_V1/ na na na haploid bacteria 2718001 2692604 38.000000 0 17 54 NCBI RefSeq GCF_000395485.1-RS_2026_01_22 2026-01-22 2647 2437 68 na GCF_000395505.1 PRJNA224116 SAMN00808987 AIUI00000000.1 na 1157456 1352 Enterococcus faecium EnGen0161 strain=UAA718 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA718_V1 Broad Institute GCA_000395505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/505/GCF_000395505.1_Ente_faec_UAA718_V1/ na na na haploid bacteria 2876273 2840442 38.000000 0 19 48 NCBI RefSeq GCF_000395505.1-RS_2026_01_12 2026-01-12 2830 2627 64 na GCF_000395525.1 PRJNA224116 SAMN00808988 AIUJ00000000.1 na 1157457 1352 Enterococcus faecium EnGen0162 strain=UAA719 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA719_V1 Broad Institute GCA_000395525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/525/GCF_000395525.1_Ente_faec_UAA719_V1/ na na na haploid bacteria 2808969 2784501 38.000000 0 26 55 NCBI RefSeq GCF_000395525.1-RS_2026_01_22 2026-01-22 2796 2577 70 na GCF_000395545.1 PRJNA224116 SAMN00808989 AIUK00000000.1 na 1157458 1352 Enterococcus faecium EnGen0163 strain=UAA720 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA720_V1 Broad Institute GCA_000395545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/545/GCF_000395545.1_Ente_faec_UAA720_V1/ na na na haploid bacteria 2908796 2865803 38.000000 0 26 62 NCBI RefSeq GCF_000395545.1-RS_2026_01_12 2026-01-12 2850 2686 71 na GCF_000395565.1 PRJNA224116 SAMN00808991 AIUL00000000.1 na 1157459 1352 Enterococcus faecium EnGen0164 strain=UAA721 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA721_V1 Broad Institute GCA_000395565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/565/GCF_000395565.1_Ente_faec_UAA721_V1/ na na na haploid bacteria 2677987 2660942 38.000000 0 22 45 NCBI RefSeq GCF_000395565.1-RS_2026_01_23 2026-01-23 2642 2442 75 na GCF_000395585.1 PRJNA224116 SAMN00808992 AIUM00000000.1 na 1157460 1352 Enterococcus faecium EnGen0165 strain=UAA722 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA722_V1 Broad Institute GCA_000395585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/585/GCF_000395585.1_Ente_faec_UAA722_V1/ na na na haploid bacteria 2655797 2596676 38.000000 0 17 64 NCBI RefSeq GCF_000395585.1-RS_2026_01_23 2026-01-23 2551 2336 73 na GCF_000395605.1 PRJNA224116 SAMN00808993 AIUN00000000.1 na 1157461 1352 Enterococcus faecium EnGen0166 strain=UAA723 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA723_V1 Broad Institute GCA_000395605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/605/GCF_000395605.1_Ente_faec_UAA723_V1/ na na na haploid bacteria 2916107 2889135 38.000000 0 30 53 NCBI RefSeq GCF_000395605.1-RS_2026_01_12 2026-01-12 2805 2663 59 na GCF_000395625.1 PRJNA224116 SAMN00808994 AIUO00000000.1 na 1157462 1352 Enterococcus faecium EnGen0167 strain=UAA724 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA724_V1 Broad Institute GCA_000395625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/625/GCF_000395625.1_Ente_faec_UAA724_V1/ na na na haploid bacteria 2969482 2951791 37.500000 0 66 88 NCBI RefSeq GCF_000395625.1-RS_2026_01_12 2026-01-12 2951 2742 76 na GCF_000395645.1 PRJNA224116 SAMN00808995 AIUP00000000.1 na 1157463 1352 Enterococcus faecium EnGen0168 strain=UAA725 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA725_V1 Broad Institute GCA_000395645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/645/GCF_000395645.1_Ente_faec_UAA725_V1/ na na na haploid bacteria 2894131 2862135 38.000000 0 33 65 NCBI RefSeq GCF_000395645.1-RS_2026_01_12 2026-01-12 2857 2690 79 na GCF_000395665.1 PRJNA224116 SAMN00808996 AIUQ00000000.1 na 1157464 1352 Enterococcus faecium EnGen0169 strain=UAA825 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA825_V1 Broad Institute GCA_000395665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/665/GCF_000395665.1_Ente_faec_UAA825_V1/ na na na haploid bacteria 2711350 2689204 38.000000 0 15 34 NCBI RefSeq GCF_000395665.1-RS_2026_01_19 2026-01-19 2643 2503 77 na GCF_000395685.1 PRJNA224116 SAMN00808997 AIUU00000000.1 na 1157465 1352 Enterococcus faecium EnGen0170 strain=UAA944 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA944_V1 Broad Institute GCA_000395685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/685/GCF_000395685.1_Ente_faec_UAA944_V1/ na na na haploid bacteria 2902958 2881603 38.000000 0 53 73 NCBI RefSeq GCF_000395685.1-RS_2026_01_12 2026-01-12 2877 2715 60 na GCF_000395705.1 PRJNA224116 SAMN00808998 AIUW00000000.1 na 1157466 1352 Enterococcus faecium EnGen0171 strain=VAN 219 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_219_V1 Broad Institute GCA_000395705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/705/GCF_000395705.1_Ente_faec_VAN_219_V1/ na na na haploid bacteria 2737830 2729242 38.000000 0 13 32 NCBI RefSeq GCF_000395705.1-RS_2026_01_15 2026-01-15 2614 2511 60 na GCF_000395725.1 PRJNA224116 SAMN00808999 AIUX00000000.1 na 1157467 1352 Enterococcus faecium EnGen0172 strain=VAN 222 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_222_V1 Broad Institute GCA_000395725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/725/GCF_000395725.1_Ente_faec_VAN_222_V1/ na na na haploid bacteria 2755372 2746042 38.000000 0 16 31 NCBI RefSeq GCF_000395725.1-RS_2026_01_15 2026-01-15 2641 2520 80 na GCF_000395745.1 PRJNA224116 SAMN00809000 AIUY00000000.1 na 1157468 1352 Enterococcus faecium EnGen0173 strain=VAN 332 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_332_V1 Broad Institute GCA_000395745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/745/GCF_000395745.1_Ente_faec_VAN_332_V1/ na na na haploid bacteria 2830829 2826804 38.000000 0 17 26 NCBI RefSeq GCF_000395745.1-RS_2026_01_15 2026-01-15 2755 2594 76 na GCF_000395765.1 PRJNA224116 SAMN00809002 AIUZ00000000.1 na 1157469 1352 Enterococcus faecium EnGen0174 strain=VAN 335 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_335_V1 Broad Institute GCA_000395765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/765/GCF_000395765.1_Ente_faec_VAN_335_V1/ na na na haploid bacteria 2808989 2792687 38.000000 0 15 42 NCBI RefSeq GCF_000395765.1-RS_2026_01_16 2026-01-16 2741 2552 87 na GCF_000395785.1 PRJNA224116 SAMN00809003 AIVA00000000.1 na 1157470 1352 Enterococcus faecium EnGen0175 strain=VAN 342 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_342_V1 Broad Institute GCA_000395785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/785/GCF_000395785.1_Ente_faec_VAN_342_V1/ na na na haploid bacteria 2840742 2830006 38.000000 0 41 54 NCBI RefSeq GCF_000395785.1-RS_2026_01_15 2026-01-15 2804 2637 82 na GCF_000395805.1 PRJNA224116 SAMN00809004 AIVB00000000.1 na 1157471 1352 Enterococcus faecium EnGen0176 strain=VAN 345 na latest Scaffold Major Full 2013-05-15 Ente_faec_VAN_345_V1 Broad Institute GCA_000395805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/805/GCF_000395805.1_Ente_faec_VAN_345_V1/ na na na haploid bacteria 2788853 2780589 38.000000 0 19 31 NCBI RefSeq GCF_000395805.1-RS_2026_01_16 2026-01-16 2715 2552 72 na GCF_000395825.1 PRJNA224116 SAMN00809005 AIVC00000000.1 na 1157472 1352 Enterococcus faecium EnGen0177 strain=VRE 108 na latest Scaffold Major Full 2013-05-15 Ente_faec_VRE_108_V1 Broad Institute GCA_000395825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/825/GCF_000395825.1_Ente_faec_VRE_108_V1/ na na na haploid bacteria 3081160 3054775 37.500000 0 35 62 NCBI RefSeq GCF_000395825.1-RS_2026_01_12 2026-01-12 3068 2870 79 na GCF_000395845.1 PRJNA224116 SAMN00809006 AIVD00000000.1 na 1157473 1352 Enterococcus faecium EnGen0178 strain=VRE 110 na latest Scaffold Major Full 2013-05-15 Ente_faec_VRE_110_V1 Broad Institute GCA_000395845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/845/GCF_000395845.1_Ente_faec_VRE_110_V1/ na na na haploid bacteria 3165497 3078021 37.500000 0 42 106 NCBI RefSeq GCF_000395845.1-RS_2026_01_12 2026-01-12 3118 2925 66 na GCF_000395865.1 PRJNA224116 SAMN00809007 AIVE00000000.1 na 1157474 1352 Enterococcus faecium EnGen0179 strain=VRE 13 na latest Scaffold Major Full 2013-05-15 Ente_faec_VRE_13_V1 Broad Institute GCA_000395865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/865/GCF_000395865.1_Ente_faec_VRE_13_V1/ na na na haploid bacteria 3102192 3072269 38.000000 0 31 61 NCBI RefSeq GCF_000395865.1-RS_2026_01_12 2026-01-12 3059 2861 79 na GCF_000395885.1 PRJNA224116 SAMN00809008 AIVF00000000.1 na 1157475 1352 Enterococcus faecium EnGen0180 strain=VRE 84 na latest Scaffold Major Full 2013-05-15 Ente_faec_VRE_84_V1 Broad Institute GCA_000395885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/885/GCF_000395885.1_Ente_faec_VRE_84_V1/ na na na haploid bacteria 3254779 3208599 37.500000 0 46 88 NCBI RefSeq GCF_000395885.1-RS_2026_01_19 2026-01-19 3255 3029 77 na GCF_000395905.1 PRJNA224116 SAMN00809009 AIUR00000000.1 na 1157476 1352 Enterococcus faecium EnGen0181 strain=UAA909 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA909_V1 Broad Institute GCA_000395905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/905/GCF_000395905.1_Ente_faec_UAA909_V1/ na na na haploid bacteria 2880932 2845092 38.000000 0 29 67 NCBI RefSeq GCF_000395905.1-RS_2026_01_12 2026-01-12 2839 2671 67 na GCF_000395925.1 PRJNA224116 SAMN00809010 AIUS00000000.1 na 1157477 1352 Enterococcus faecium EnGen0182 strain=UAA910 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA910_V1 Broad Institute GCA_000395925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/925/GCF_000395925.1_Ente_faec_UAA910_V1/ na na na haploid bacteria 2773897 2743807 38.000000 0 20 48 NCBI RefSeq GCF_000395925.1-RS_2026_01_22 2026-01-22 2721 2504 74 na GCF_000395945.1 PRJNA224116 SAMN00809011 AIUT00000000.1 na 1157478 1352 Enterococcus faecium EnGen0183 strain=UAA911 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA911_V1 Broad Institute GCA_000395945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/945/GCF_000395945.1_Ente_faec_UAA911_V1/ na na na haploid bacteria 2874388 2816576 38.000000 0 28 72 NCBI RefSeq GCF_000395945.1-RS_2026_01_21 2026-01-21 2798 2611 76 na GCF_000395965.1 PRJNA224116 SAMN00808870 AITN00000000.1 na 1157479 1352 Enterococcus faecium EnGen0184 strain=F9730129-1 na latest Scaffold Major Full 2013-05-15 Ente_faec_F9730129-1_V1 Broad Institute GCA_000395965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/965/GCF_000395965.1_Ente_faec_F9730129-1_V1/ na na na haploid bacteria 2768862 2687070 38.000000 0 27 94 NCBI RefSeq GCF_000395965.1-RS_2026_01_22 2026-01-22 2712 2424 90 na GCF_000395985.1 PRJNA224116 SAMN00808871 AIPS00000000.1 na 1157378 1351 Enterococcus faecalis EnGen0194 strain=B1005 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1005_V1 Broad Institute GCA_000395985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/395/985/GCF_000395985.1_Ente_faec_B1005_V1/ na na na haploid bacteria 3330908 3313682 37.000000 0 24 44 NCBI RefSeq GCF_000395985.1-RS_2026_01_22 2026-01-22 3345 3203 75 na GCF_000396005.1 PRJNA224116 SAMN00808872 AIPT00000000.1 na 1157379 1351 Enterococcus faecalis EnGen0195 strain=B1138 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1138_V1 Broad Institute GCA_000396005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/005/GCF_000396005.1_Ente_faec_B1138_V1/ na na na haploid bacteria 3255112 3240340 37.000000 0 28 44 NCBI RefSeq GCF_000396005.1-RS_2026_01_20 2026-01-20 3243 3115 60 na GCF_000396025.1 PRJNA224116 SAMN00808873 AIPU00000000.1 na 1157380 1351 Enterococcus faecalis EnGen0196 strain=B1249 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1249_V1 Broad Institute GCA_000396025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/025/GCF_000396025.1_Ente_faec_B1249_V1/ na na na haploid bacteria 3288728 3265877 37.000000 0 39 60 NCBI RefSeq GCF_000396025.1-RS_2026_01_20 2026-01-20 3292 3157 67 na GCF_000396045.1 PRJNA224116 SAMN00808874 AIQG00000000.1 na 1157381 1351 Enterococcus faecalis EnGen0197 strain=B1851 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1851_V1 Broad Institute GCA_000396045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/045/GCF_000396045.1_Ente_faec_B1851_V1/ na na na haploid bacteria 3291336 3275564 37.000000 0 19 33 NCBI RefSeq GCF_000396045.1-RS_2026_01_20 2026-01-20 3284 3149 72 na GCF_000396065.1 PRJNA224116 SAMN00808875 AIQI00000000.1 na 1157382 1351 Enterococcus faecalis EnGen0198 strain=B1921 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1921_V1 Broad Institute GCA_000396065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/065/GCF_000396065.1_Ente_faec_B1921_V1/ na na na haploid bacteria 2938518 2931188 37.000000 0 15 27 NCBI RefSeq GCF_000396065.1-RS_2026_01_12 2026-01-12 2849 2723 88 na GCF_000396085.1 PRJNA224116 SAMN00808876 AIQJ00000000.1 na 1157383 1351 Enterococcus faecalis EnGen0199 strain=B1933 na latest Scaffold Major Full 2013-05-15 Ente_faec_B1933_V1 Broad Institute GCA_000396085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/085/GCF_000396085.1_Ente_faec_B1933_V1/ na na na haploid bacteria 3255672 3244166 37.000000 0 21 34 NCBI RefSeq GCF_000396085.1-RS_2026_01_20 2026-01-20 3238 3110 60 na GCF_000396105.1 PRJNA224116 SAMN00808877 AIQK00000000.1 na 1157384 1351 Enterococcus faecalis EnGen0200 strain=B2202 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2202_V1 Broad Institute GCA_000396105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/105/GCF_000396105.1_Ente_faec_B2202_V1/ na na na haploid bacteria 3329099 3307652 37.000000 0 21 38 NCBI RefSeq GCF_000396105.1-RS_2026_01_21 2026-01-21 3327 3195 66 na GCF_000396125.1 PRJNA224116 SAMN00808878 AIQM00000000.1 na 1157385 1351 Enterococcus faecalis EnGen0201 strain=B2211 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2211_V1 Broad Institute GCA_000396125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/125/GCF_000396125.1_Ente_faec_B2211_V1/ na na na haploid bacteria 3276641 3263535 37.000000 0 37 53 NCBI RefSeq GCF_000396125.1-RS_2026_01_20 2026-01-20 3284 3126 86 na GCF_000396145.1 PRJNA224116 SAMN00808879 AIQO00000000.1 na 1157386 1351 Enterococcus faecalis EnGen0202 strain=B2277 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2277_V1 Broad Institute GCA_000396145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/145/GCF_000396145.1_Ente_faec_B2277_V1/ na na na haploid bacteria 3293130 3272104 37.000000 0 40 56 NCBI RefSeq GCF_000396145.1-RS_2026_01_20 2026-01-20 3297 3150 73 na GCF_000396165.1 PRJNA224116 SAMN00808881 AIQU00000000.1 na 1157387 1351 Enterococcus faecalis EnGen0203 strain=B2670 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2670_V1 Broad Institute GCA_000396165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/165/GCF_000396165.1_Ente_faec_B2670_V1/ na na na haploid bacteria 3285629 3260647 37.000000 0 43 60 NCBI RefSeq GCF_000396165.1-RS_2026_01_20 2026-01-20 3268 3131 64 na GCF_000396185.1 PRJNA224116 SAMN00808882 AIQV00000000.1 na 1157388 1351 Enterococcus faecalis EnGen0204 strain=B2685 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2685_V1 Broad Institute GCA_000396185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/185/GCF_000396185.1_Ente_faec_B2685_V1/ na na na haploid bacteria 3287489 3275752 37.000000 0 37 52 NCBI RefSeq GCF_000396185.1-RS_2026_01_20 2026-01-20 3286 3133 77 na GCF_000396205.1 PRJNA224116 SAMN00808883 AIQW00000000.1 na 1157389 1351 Enterococcus faecalis EnGen0207 strain=B2687 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2687_V1 Broad Institute GCA_000396205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/205/GCF_000396205.1_Ente_faec_B2687_V1/ na na na haploid bacteria 3334570 3313895 37.000000 0 22 35 NCBI RefSeq GCF_000396205.1-RS_2026_01_22 2026-01-22 3334 3177 92 na GCF_000396225.1 PRJNA224116 SAMN00808884 AIQX00000000.1 na 1157390 1351 Enterococcus faecalis EnGen0205 strain=B2802 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2802_V1 Broad Institute GCA_000396225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/225/GCF_000396225.1_Ente_faec_B2802_V1/ na na na haploid bacteria 3294158 3282975 37.000000 0 35 47 NCBI RefSeq GCF_000396225.1-RS_2026_01_20 2026-01-20 3318 3167 83 na GCF_000396245.1 PRJNA224116 SAMN00808885 AIQY00000000.1 na 1157391 1351 Enterococcus faecalis EnGen0228 strain=B2813 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2813_V1 Broad Institute GCA_000396245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/245/GCF_000396245.1_Ente_faec_B2813_V1/ na na na haploid bacteria 3273089 3262289 37.000000 0 34 47 NCBI RefSeq GCF_000396245.1-RS_2026_01_20 2026-01-20 3268 3138 61 na GCF_000396265.1 PRJNA224116 SAMN00808886 AIQZ00000000.1 na 1157392 1351 Enterococcus faecalis EnGen0206 strain=B2864 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2864_V1 Broad Institute GCA_000396265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/265/GCF_000396265.1_Ente_faec_B2864_V1/ na na na haploid bacteria 3279979 3263587 37.000000 0 40 58 NCBI RefSeq GCF_000396265.1-RS_2026_01_20 2026-01-20 3289 3141 72 na GCF_000396285.1 PRJNA224116 SAMN00808887 AIRA00000000.1 na 1157393 1351 Enterococcus faecalis EnGen0374 strain=B2867 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2867_V1 Broad Institute GCA_000396285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/285/GCF_000396285.1_Ente_faec_B2867_V1/ na na na haploid bacteria 3287115 3275195 37.000000 0 42 60 NCBI RefSeq GCF_000396285.1-RS_2026_01_20 2026-01-20 3298 3149 72 na GCF_000396305.1 PRJNA224116 SAMN00808888 AIRB00000000.1 na 1157394 1351 Enterococcus faecalis EnGen0208 strain=B2949 na latest Scaffold Major Full 2013-05-15 Ente_faec_B2949_V1 Broad Institute GCA_000396305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/305/GCF_000396305.1_Ente_faec_B2949_V1/ na na na haploid bacteria 3206868 3196939 37.000000 0 22 32 NCBI RefSeq GCF_000396305.1-RS_2026_01_20 2026-01-20 3200 3073 68 na GCF_000396325.1 PRJNA224116 SAMN00808889 AIRF00000000.1 na 1157395 1351 Enterococcus faecalis EnGen0209 strain=B3119 na latest Scaffold Major Full 2013-05-15 Ente_faec_B3119_V1 Broad Institute GCA_000396325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/325/GCF_000396325.1_Ente_faec_B3119_V1/ na na na haploid bacteria 3285535 3274912 37.000000 0 41 58 NCBI RefSeq GCF_000396325.1-RS_2026_01_20 2026-01-20 3287 3136 80 na GCF_000396345.1 PRJNA224116 SAMN00808890 AIRH00000000.1 na 1157396 1351 Enterococcus faecalis EnGen0210 strain=B3196 na latest Scaffold Major Full 2013-05-15 Ente_faec_B3196_V1 Broad Institute GCA_000396345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/345/GCF_000396345.1_Ente_faec_B3196_V1/ na na na haploid bacteria 3297106 3284414 37.000000 0 42 59 NCBI RefSeq GCF_000396345.1-RS_2026_01_20 2026-01-20 3329 3151 104 na GCF_000396365.1 PRJNA224116 SAMN00808892 AIRI00000000.1 na 1157397 1351 Enterococcus faecalis EnGen0211 strain=B3286 na latest Scaffold Major Full 2013-05-15 Ente_faec_B3286_V1 Broad Institute GCA_000396365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/365/GCF_000396365.1_Ente_faec_B3286_V1/ na na na haploid bacteria 3298509 3288142 37.000000 0 26 42 NCBI RefSeq GCF_000396365.1-RS_2026_01_20 2026-01-20 3310 3176 71 na GCF_000396385.1 PRJNA224116 SAMN00808893 AIRJ00000000.1 na 1157398 1351 Enterococcus faecalis EnGen0212 strain=B3336 na latest Scaffold Major Full 2013-05-15 Ente_faec_B3336_V1 Broad Institute GCA_000396385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/385/GCF_000396385.1_Ente_faec_B3336_V1/ na na na haploid bacteria 3128997 3106590 37.000000 0 12 34 NCBI RefSeq GCF_000396385.1-RS_2026_01_12 2026-01-12 3037 2904 65 na GCF_000396405.1 PRJNA224116 SAMN00808894 AIRK00000000.1 na 1157399 1351 Enterococcus faecalis EnGen0213 strain=B4008 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4008_V1 Broad Institute GCA_000396405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/405/GCF_000396405.1_Ente_faec_B4008_V1/ na na na haploid bacteria 3293850 3273124 37.000000 0 39 58 NCBI RefSeq GCF_000396405.1-RS_2026_01_20 2026-01-20 3300 3138 84 na GCF_000396425.1 PRJNA224116 SAMN00808895 AIRL00000000.1 na 1157400 1351 Enterococcus faecalis EnGen0214 strain=B4018 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4018_V1 Broad Institute GCA_000396425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/425/GCF_000396425.1_Ente_faec_B4018_V1/ na na na haploid bacteria 3238057 3216928 37.000000 0 31 45 NCBI RefSeq GCF_000396425.1-RS_2026_01_20 2026-01-20 3232 3092 71 na GCF_000396445.1 PRJNA224116 SAMN00808896 AIRM00000000.1 na 1157401 1351 Enterococcus faecalis EnGen0215 strain=B4148 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4148_V1 Broad Institute GCA_000396445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/445/GCF_000396445.1_Ente_faec_B4148_V1/ na na na haploid bacteria 3282859 3268254 37.000000 0 25 42 NCBI RefSeq GCF_000396445.1-RS_2026_01_20 2026-01-20 3312 3156 96 na GCF_000396465.1 PRJNA224116 SAMN00808897 AIRN00000000.1 na 1157402 1351 Enterococcus faecalis EnGen0216 strain=B4163 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4163_V1 Broad Institute GCA_000396465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/465/GCF_000396465.1_Ente_faec_B4163_V1/ na na na haploid bacteria 3338001 3314307 37.000000 0 41 62 NCBI RefSeq GCF_000396465.1-RS_2026_01_22 2026-01-22 3353 3221 62 na GCF_000396485.1 PRJNA224116 SAMN00808898 AIRO00000000.1 na 1157403 1351 Enterococcus faecalis EnGen0217 strain=B4259 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4259_V1 Broad Institute GCA_000396485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/485/GCF_000396485.1_Ente_faec_B4259_V1/ na na na haploid bacteria 3305733 3291119 37.000000 0 35 56 NCBI RefSeq GCF_000396485.1-RS_2026_01_22 2026-01-22 3319 3165 76 na GCF_000396505.1 PRJNA224116 SAMN00808899 AIRP00000000.1 na 1157404 1351 Enterococcus faecalis EnGen0218 strain=B4267 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4267_V1 Broad Institute GCA_000396505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/505/GCF_000396505.1_Ente_faec_B4267_V1/ na na na haploid bacteria 3287722 3272191 37.000000 0 39 56 NCBI RefSeq GCF_000396505.1-RS_2026_01_20 2026-01-20 3303 3161 70 na GCF_000396525.1 PRJNA224116 SAMN00808900 AIRQ00000000.1 na 1157405 1351 Enterococcus faecalis EnGen0219 strain=B4270 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4270_V1 Broad Institute GCA_000396525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/525/GCF_000396525.1_Ente_faec_B4270_V1/ na na na haploid bacteria 3292981 3274476 37.000000 0 41 60 NCBI RefSeq GCF_000396525.1-RS_2026_01_20 2026-01-20 3297 3169 54 na GCF_000396545.1 PRJNA224116 SAMN00808901 AIRR00000000.1 na 1157406 1351 Enterococcus faecalis EnGen0220 strain=B4411 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4411_V1 Broad Institute GCA_000396545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/545/GCF_000396545.1_Ente_faec_B4411_V1/ na na na haploid bacteria 3319555 3303294 37.000000 0 45 58 NCBI RefSeq GCF_000396545.1-RS_2026_01_22 2026-01-22 3346 3203 69 na GCF_000396565.1 PRJNA224116 SAMN00808903 AIRS00000000.1 na 1157407 1351 Enterococcus faecalis EnGen0221 strain=B4568 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4568_V1 Broad Institute GCA_000396565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/565/GCF_000396565.1_Ente_faec_B4568_V1/ na na na haploid bacteria 3246155 3234156 37.000000 0 27 39 NCBI RefSeq GCF_000396565.1-RS_2026_01_20 2026-01-20 3248 3117 69 na GCF_000396585.1 PRJNA224116 SAMN00808904 AIRT00000000.1 na 1157408 1351 Enterococcus faecalis EnGen0222 strain=B4638 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4638_V1 Broad Institute GCA_000396585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/585/GCF_000396585.1_Ente_faec_B4638_V1/ na na na haploid bacteria 3316958 3299968 37.000000 0 36 54 NCBI RefSeq GCF_000396585.1-RS_2026_01_22 2026-01-22 3327 3181 71 na GCF_000396605.1 PRJNA224116 SAMN00808905 AIRU00000000.1 na 1157409 1351 Enterococcus faecalis EnGen0223 strain=B4672 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4672_V1 Broad Institute GCA_000396605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/605/GCF_000396605.1_Ente_faec_B4672_V1/ na na na haploid bacteria 3242526 3231458 37.000000 0 26 40 NCBI RefSeq GCF_000396605.1-RS_2026_01_20 2026-01-20 3237 3100 73 na GCF_000396625.1 PRJNA224116 SAMN00808906 AIRV00000000.1 na 1157410 1351 Enterococcus faecalis EnGen0224 strain=B4674 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4674_V1 Broad Institute GCA_000396625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/625/GCF_000396625.1_Ente_faec_B4674_V1/ na na na haploid bacteria 3301225 3254365 37.000000 0 33 55 NCBI RefSeq GCF_000396625.1-RS_2026_01_20 2026-01-20 3292 3146 65 na GCF_000396645.1 PRJNA224116 SAMN00808907 AIRW00000000.1 na 1157411 1351 Enterococcus faecalis EnGen0225 strain=B4969 na latest Scaffold Major Full 2013-05-15 Ente_faec_B4969_V1 Broad Institute GCA_000396645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/645/GCF_000396645.1_Ente_faec_B4969_V1/ na na na haploid bacteria 3331743 3320545 37.000000 0 38 54 NCBI RefSeq GCF_000396645.1-RS_2026_01_22 2026-01-22 3345 3207 66 na GCF_000396665.1 PRJNA224116 SAMN00808908 AIRX00000000.1 na 1157412 1351 Enterococcus faecalis EnGen0226 strain=B5076 na latest Scaffold Major Full 2013-05-15 Ente_faec_B5076_V1 Broad Institute GCA_000396665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/665/GCF_000396665.1_Ente_faec_B5076_V1/ na na na haploid bacteria 3089385 3080593 37.500000 0 20 34 NCBI RefSeq GCF_000396665.1-RS_2026_01_13 2026-01-13 3073 2948 66 na GCF_000396685.1 PRJNA224116 SAMN00808909 AITR00000000.1 na 1157480 1352 Enterococcus faecium EnGen0185 strain=HF50104 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50104_V1 Broad Institute GCA_000396685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/685/GCF_000396685.1_Ente_faec_HF50104_V1/ na na na haploid bacteria 2804238 2792167 38.000000 0 19 39 NCBI RefSeq GCF_000396685.1-RS_2026_01_18 2026-01-18 2793 2568 90 na GCF_000396705.1 PRJNA224116 SAMN00808910 AITS00000000.1 na 1157481 1352 Enterococcus faecium EnGen0186 strain=HF50105 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50105_V1 Broad Institute GCA_000396705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/705/GCF_000396705.1_Ente_faec_HF50105_V1/ na na na haploid bacteria 2638948 2621794 38.000000 0 15 38 NCBI RefSeq GCF_000396705.1-RS_2026_01_20 2026-01-20 2559 2347 91 na GCF_000396725.1 PRJNA224116 SAMN00808911 AITT00000000.1 na 1157482 1352 Enterococcus faecium EnGen0187 strain=HF50106 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50106_V1 Broad Institute GCA_000396725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/725/GCF_000396725.1_Ente_faec_HF50106_V1/ na na na haploid bacteria 2645321 2624030 38.000000 0 16 39 NCBI RefSeq GCF_000396725.1-RS_2026_01_20 2026-01-20 2558 2349 88 na GCF_000396745.1 PRJNA224116 SAMN00808912 AITU00000000.1 na 1157483 1352 Enterococcus faecium EnGen0188 strain=HF50203 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50203_V1 Broad Institute GCA_000396745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/745/GCF_000396745.1_Ente_faec_HF50203_V1/ na na na haploid bacteria 2629125 2618752 38.000000 0 7 26 NCBI RefSeq GCF_000396745.1-RS_2026_01_20 2026-01-20 2554 2357 72 na GCF_000396765.1 PRJNA224116 SAMN00808914 AITV00000000.1 na 1157484 1352 Enterococcus faecium EnGen0189 strain=HF50204 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50204_V1 Broad Institute GCA_000396765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/765/GCF_000396765.1_Ente_faec_HF50204_V1/ na na na haploid bacteria 2648756 2625315 38.000000 0 11 38 NCBI RefSeq GCF_000396765.1-RS_2026_01_20 2026-01-20 2582 2378 86 na GCF_000396785.1 PRJNA224116 SAMN00808915 AITW00000000.1 na 1157485 1352 Enterococcus faecium EnGen0190 strain=HF50215 na latest Scaffold Major Full 2013-05-15 Ente_faec_HF50215_V1 Broad Institute GCA_000396785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/785/GCF_000396785.1_Ente_faec_HF50215_V1/ na na na haploid bacteria 2821884 2801179 38.000000 0 19 44 NCBI RefSeq GCF_000396785.1-RS_2026_01_18 2026-01-18 2807 2592 82 na GCF_000396805.1 PRJNA224116 SAMN00808916 AITZ00000000.1 na 1157486 1352 Enterococcus faecium EnGen0191 strain=HM1073 na latest Scaffold Major Full 2013-05-15 Ente_faec_HM1073_V1 Broad Institute GCA_000396805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/805/GCF_000396805.1_Ente_faec_HM1073_V1/ na na na haploid bacteria 2977570 2967523 38.000000 0 18 32 NCBI RefSeq GCF_000396805.1-RS_2026_01_21 2026-01-21 3011 2754 73 na GCF_000396825.1 PRJNA224116 SAMN00808917 AITY00000000.1 na 1157487 1352 Enterococcus faecium EnGen0192 strain=HM1072 na latest Scaffold Major Full 2013-05-15 Ente_faec_HM1072_V1 Broad Institute GCA_000396825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/825/GCF_000396825.1_Ente_faec_HM1072_V1/ na na na haploid bacteria 3122368 3066514 37.500000 0 38 92 NCBI RefSeq GCF_000396825.1-RS_2026_01_13 2026-01-13 3117 2839 79 na GCF_000396845.1 PRJNA224116 SAMN00808918 AIUV00000000.1 na 1157488 1352 Enterococcus faecium EnGen0193 strain=UAA945 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA945_V1 Broad Institute GCA_000396845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/845/GCF_000396845.1_Ente_faec_UAA945_V1/ na na na haploid bacteria 2928938 2915298 38.000000 0 48 64 NCBI RefSeq GCF_000396845.1-RS_2026_01_13 2026-01-13 2955 2789 62 na GCF_000396865.1 PRJNA224116 SAMN00809097 AIZQ00000000.1 na 1158540 1351 Enterococcus faecalis EnGen0253 strain=EnGen0253 na latest Scaffold Major Full 2013-05-15 Ente_faec_EnGen0253_V1 Broad Institute GCA_000396865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/865/GCF_000396865.1_Ente_faec_EnGen0253_V1/ na na na haploid bacteria 3240421 3228691 37.500000 0 38 54 NCBI RefSeq GCF_000396865.1-RS_2026_01_21 2026-01-21 3227 3054 81 na GCF_000396885.1 PRJNA224116 SAMN00809108 AIZR00000000.1 na 1158541 1352 Enterococcus faecium EnGen0254 strain=UAA947 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA947_V1 Broad Institute GCA_000396885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/885/GCF_000396885.1_Ente_faec_UAA947_V1/ na na na haploid bacteria 3036698 2981823 38.000000 0 34 75 NCBI RefSeq GCF_000396885.1-RS_2026_01_13 2026-01-13 2950 2775 68 na GCF_000396905.1 PRJNA224116 SAMN00809119 AIZS00000000.1 na 1158542 1351 Enterococcus faecalis EnGen0232 strain=UAA948 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA948_V1 Broad Institute GCA_000396905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/905/GCF_000396905.1_Ente_faec_UAA948_V1/ na na na haploid bacteria 3207462 3195189 37.500000 0 40 53 NCBI RefSeq GCF_000396905.1-RS_2026_01_21 2026-01-21 3201 3035 80 na GCF_000396925.1 PRJNA224116 SAMN00809130 AIZT00000000.1 na 1158543 1352 Enterococcus faecium EnGen0255 strain=UAA951 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA951_V1 Broad Institute GCA_000396925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/925/GCF_000396925.1_Ente_faec_UAA951_V1/ na na na haploid bacteria 2826506 2786381 38.000000 0 28 66 NCBI RefSeq GCF_000396925.1-RS_2026_01_15 2026-01-15 2792 2643 64 na GCF_000396945.1 PRJNA224116 SAMN00809141 AIZU00000000.1 na 1158544 1352 Enterococcus faecium EnGen0256 strain=UAA952 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA952_V1 Broad Institute GCA_000396945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/945/GCF_000396945.1_Ente_faec_UAA952_V1/ na na na haploid bacteria 3198771 3140467 37.500000 0 36 92 NCBI RefSeq GCF_000396945.1-RS_2026_01_19 2026-01-19 3205 2996 72 na GCF_000396965.1 PRJNA224116 SAMN00809143 AIZV00000000.1 na 1158545 1352 Enterococcus faecium EnGen0257 strain=UAA1007 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1007_V1 Broad Institute GCA_000396965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/965/GCF_000396965.1_Ente_faec_UAA1007_V1/ na na na haploid bacteria 2927660 2893408 38.000000 0 17 52 NCBI RefSeq GCF_000396965.1-RS_2026_01_13 2026-01-13 2881 2704 73 na GCF_000396985.1 PRJNA224116 SAMN00809144 AIZW00000000.1 na 1158546 1351 Enterococcus faecalis EnGen0233 strain=UAA1014 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1014_V1 Broad Institute GCA_000396985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/396/985/GCF_000396985.1_Ente_faec_UAA1014_V1/ na na na haploid bacteria 2951954 2943835 37.500000 0 24 34 NCBI RefSeq GCF_000396985.1-RS_2026_01_13 2026-01-13 2893 2754 54 na GCF_000397005.1 PRJNA224116 SAMN00809145 AIZX00000000.1 na 1158547 1352 Enterococcus faecium EnGen0258 strain=UAA1019 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1019_V1 Broad Institute GCA_000397005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/005/GCF_000397005.1_Ente_faec_UAA1019_V1/ na na na haploid bacteria 3062037 3012284 37.500000 0 19 55 NCBI RefSeq GCF_000397005.1-RS_2026_01_13 2026-01-13 3023 2854 65 na GCF_000397025.1 PRJNA224116 SAMN00809146 AIZY00000000.1 na 1158548 1352 Enterococcus faecium EnGen0259 strain=UAA1022 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1022_V1 Broad Institute GCA_000397025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/025/GCF_000397025.1_Ente_faec_UAA1022_V1/ na na na haploid bacteria 2542512 2531319 38.000000 0 15 35 NCBI RefSeq GCF_000397025.1-RS_2026_01_24 2026-01-24 2475 2284 70 na GCF_000397045.1 PRJNA224116 SAMN00809098 AIZZ00000000.1 na 1158549 1352 Enterococcus faecium EnGen0260 strain=UAA1023 na latest Scaffold Major Full 2013-05-15 Ente_faec_UAA1023_V1 Broad Institute GCA_000397045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/045/GCF_000397045.1_Ente_faec_UAA1023_V1/ na na na haploid bacteria 2981603 2941875 37.500000 0 16 62 NCBI RefSeq GCF_000397045.1-RS_2026_01_13 2026-01-13 2957 2776 72 na GCF_000397065.2 PRJNA224116 SAMN02471937 ASAD00000000.1 reference genome 1318628 209639 Marinobacter lipolyticus SM19 strain=SM19 na latest Scaffold Minor Full 2013-05-21 MarLipol1.0 University of Sevilla GCA_000397065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/065/GCF_000397065.2_MarLipol1.0/ na assembly from type material na haploid bacteria 4020008 4017629 57.000000 0 25 57 NCBI RefSeq GCF_000397065.2-RS_2025_12_09 2025-12-09 3680 3611 53 23814106 GCF_000397125.1 PRJNA224116 SAMN02470148 APJU00000000.1 na 1293289 197 Campylobacter jejuni str. NCCP No. 15742 strain=NCCP No. 15742 na latest Contig Major Full 2013-05-16 Campylobacter jejuni1.0 Korea National Institute of Health GCA_000397125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/125/GCF_000397125.1_Campylobacter_jejuni1.0/ na na na haploid bacteria 1592587 1592587 30.500000 0 5 5 NCBI RefSeq GCF_000397125.1-RS_2025_06_27 2025-06-27 1686 1535 56 na GCF_000397145.1 PRJNA224116 SAMN02415250 APJT00000000.1 na 1293288 1639 Listeria monocytogenes serotype 1/2a str. NCCP No. 15743 strain=NCCP No. 15743 na latest Contig Major Full 2013-05-16 Listeria monocytogenes 1.0 Korea National Institute of Health GCA_000397145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/145/GCF_000397145.1_Listeria_monocytogenes_1.0/ na na na haploid bacteria 2860660 2860660 38.000000 0 5 5 NCBI RefSeq GCF_000397145.1-RS_2025_01_06 2025-01-06 2877 2719 89 na GCF_000397165.1 PRJNA224116 SAMN02603935 na na 767453 1613 Limosilactobacillus fermentum F-6 strain=F-6 na latest Complete Genome Major Full 2013-05-16 ASM39716v1 The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China GCA_000397165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/165/GCF_000397165.1_ASM39716v1/ na na na haploid bacteria 2064620 2064620 51.500000 1 1 1 NCBI RefSeq GCF_000397165.1-RS_2025_09_10 2025-09-10 2100 1891 77 na GCF_000397185.1 PRJNA224116 SAMN02603946 na reference genome 980422 59748 Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 strain=NZSb11 na latest Complete Genome Major Full 2013-05-16 ASM39718v1 The New Zealand Institute for Plant and Food Ltd GCA_000397185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/185/GCF_000397185.1_ASM39718v1/ na na na haploid bacteria 959779 959779 27.000000 1 1 1 NCBI RefSeq GCF_000397185.1-RS_2026_03_31 2026-03-31 986 875 44 23915186 GCF_000397205.1 PRJNA224116 SAMN02603271 na na 1124983 380021 Pseudomonas protegens CHA0 strain=CHA0 na latest Complete Genome Major Full 2013-05-16 ASM39720v1 Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000397205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/205/GCF_000397205.1_ASM39720v1/ na assembly from type material na haploid bacteria 6867980 6867980 63.500000 1 1 1 NCBI RefSeq GCF_000397205.1-RS_2026_01_30 2026-01-30 6303 6148 88 na GCF_000397245.1 PRJNA224116 SAMN01894009 AOQC00000000.1 na 1286330 562 Escherichia coli TOP382-1 strain=TOP382-1 na latest Contig Major Full 2013-05-16 Ec13_E1F1_TOP382-1_120714 National University of Singapore, Genome Institute of Singapore GCA_000397245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/245/GCF_000397245.1_Ec13_E1F1_TOP382-1_120714/ na na na haploid bacteria 4949220 4949220 50.500000 0 118 118 NCBI RefSeq GCF_000397245.1-RS_2025_06_04 2025-06-04 4783 4423 100 23658245 GCF_000397445.1 PRJNA224116 SAMN01894019 AOQM00000000.1 na 1286340 562 Escherichia coli TOP550-2 strain=TOP550-2 na latest Contig Major Full 2013-05-16 Ec13_E3F2_TOP550-2_120714 National University of Singapore, Genome Institute of Singapore GCA_000397445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/445/GCF_000397445.1_Ec13_E3F2_TOP550-2_120714/ na na na haploid bacteria 5034688 5034688 50.500000 0 131 131 NCBI RefSeq GCF_000397445.1-RS_2025_06_04 2025-06-04 4905 4469 102 23658245 GCF_000397485.1 PRJNA224116 SAMN01894021 AOQO00000000.1 na 1286342 562 Escherichia coli TOP550-4 strain=TOP550-4 na latest Contig Major Full 2013-05-16 Ec13_E3F4_TOP550-4_120714 National University of Singapore, Genome Institute of Singapore GCA_000397485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/485/GCF_000397485.1_Ec13_E3F4_TOP550-4_120714/ na na na haploid bacteria 4982633 4982633 50.500000 0 120 120 NCBI RefSeq GCF_000397485.1-RS_2025_04_26 2025-04-26 4842 4459 102 23658245 GCF_000397565.1 PRJNA224116 SAMN01894025 AOQS00000000.1 na 1286346 562 Escherichia coli TOP2396-3 strain=TOP2396-3 na latest Contig Major Full 2013-05-16 Ec72_E1F3_TOP2396-3_120714 National University of Singapore, Genome Institute of Singapore GCA_000397565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/565/GCF_000397565.1_Ec72_E1F3_TOP2396-3_120714/ na na na haploid bacteria 4856995 4856995 50.500000 0 638 638 NCBI RefSeq GCF_000397565.1-RS_2025_06_04 2025-06-04 5065 4731 30 23658245 GCF_000397605.1 PRJNA224116 SAMN01894027 AOQU00000000.1 na 1286348 562 Escherichia coli TOP2522-1 strain=TOP2522-1 na latest Contig Major Full 2013-05-16 Ec72_E2F1_TOP2522-1_120714 National University of Singapore, Genome Institute of Singapore GCA_000397605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/605/GCF_000397605.1_Ec72_E2F1_TOP2522-1_120714/ na na na haploid bacteria 4657618 4657618 51.000000 0 412 412 NCBI RefSeq GCF_000397605.1-RS_2026_03_21 2026-03-21 4513 4302 28 23658245 GCF_000397625.1 PRJNA224116 SAMN01894029 AOQV00000000.1 na 1286350 562 Escherichia coli TOP2652 strain=TOP2652 na latest Contig Major Full 2013-05-16 Ec72_E3U1_TOP2652_120714 National University of Singapore, Genome Institute of Singapore GCA_000397625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/625/GCF_000397625.1_Ec72_E3U1_TOP2652_120714/ na na na haploid bacteria 4878217 4878217 50.500000 0 145 145 NCBI RefSeq GCF_000397625.1-RS_2025_06_09 2025-06-09 4759 4396 98 23658245 GCF_000397645.1 PRJNA224116 SAMN01894030 AOQW00000000.1 na 1286351 562 Escherichia coli TOP2662-1 strain=TOP2662-1 na latest Contig Major Full 2013-05-16 Ec72_E3F1_TOP2662-1_120714 National University of Singapore, Genome Institute of Singapore GCA_000397645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/645/GCF_000397645.1_Ec72_E3F1_TOP2662-1_120714/ na na na haploid bacteria 4925881 4925881 50.500000 0 147 147 NCBI RefSeq GCF_000397645.1-RS_2025_06_04 2025-06-04 4795 4421 101 23658245 GCF_000397665.1 PRJNA224116 SAMN01894031 AOQX00000000.1 na 1286352 562 Escherichia coli TOP2662-2 strain=TOP2662-2 na latest Contig Major Full 2013-05-16 Ec72_E3F2_TOP2662-2_120714 National University of Singapore, Genome Institute of Singapore GCA_000397665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/665/GCF_000397665.1_Ec72_E3F2_TOP2662-2_120714/ na na na haploid bacteria 4932153 4932153 50.500000 0 152 152 NCBI RefSeq GCF_000397665.1-RS_2025_06_04 2025-06-04 4801 4401 103 23658245 GCF_000397685.1 PRJNA224116 SAMN01894032 AOQY00000000.1 na 1286353 562 Escherichia coli TOP2662-3 strain=TOP2662-3 na latest Contig Major Full 2013-05-16 Ec72_E3F3_TOP2662-3_120714 National University of Singapore, Genome Institute of Singapore GCA_000397685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/685/GCF_000397685.1_Ec72_E3F3_TOP2662-3_120714/ na na na haploid bacteria 4993644 4993644 50.500000 0 135 135 NCBI RefSeq GCF_000397685.1-RS_2025_04_26 2025-04-26 4858 4464 102 23658245 GCF_000397705.1 PRJNA224116 SAMN01894033 AOQZ00000000.1 na 1286354 562 Escherichia coli TOP2662-4 strain=TOP2662-4 na latest Contig Major Full 2013-05-16 Ec72_E3F4_TOP2662-4_120714 National University of Singapore, Genome Institute of Singapore GCA_000397705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/705/GCF_000397705.1_Ec72_E3F4_TOP2662-4_120714/ na na na haploid bacteria 4977211 4977211 50.500000 0 152 152 NCBI RefSeq GCF_000397705.1-RS_2025_06_09 2025-06-09 4874 4466 103 23658245 GCF_000397725.1 PRJNA224116 SAMN01894022 AORB00000000.1 na 1286343 562 Escherichia coli TOP2386 strain=TOP2386 na latest Contig Major Full 2013-05-16 Ec72_E1U1_TOP2386_MIRA_120724 National University of Singapore, Genome Institute of Singapore GCA_000397725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/725/GCF_000397725.1_Ec72_E1U1_TOP2386_MIRA_120724/ na na na haploid bacteria 4637655 4637655 51.000000 0 195 195 NCBI RefSeq GCF_000397725.1-RS_2025_06_09 2025-06-09 4580 4252 120 23658245 GCF_000397745.1 PRJNA224116 SAMN01894029 AORA00000000.1 na 1286350 562 Escherichia coli TOP2652 strain=TOP2652 na latest Contig Major Full 2013-05-16 Ec72_E3U1_TOP2652_MIRA_120724 National University of Singapore, Genome Institute of Singapore GCA_000397745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/397/745/GCF_000397745.1_Ec72_E3U1_TOP2652_MIRA_120724/ na na na haploid bacteria 5196886 5196886 50.500000 0 306 306 NCBI RefSeq GCF_000397745.1-RS_2025_06_09 2025-06-09 5216 4783 108 23658245 GCF_000398785.1 PRJNA224116 SAMN02596795 AHCJ00000000.1 na 718222 1396 Bacillus cereus TIAC219 strain=TIAC219 na latest Scaffold Major Full 2013-05-16 Baci_cere_TIAC219_V2 Broad Institute GCA_000398785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/785/GCF_000398785.1_Baci_cere_TIAC219_V2/ na na na haploid bacteria 6820286 6671480 34.500000 0 37 128 NCBI RefSeq GCF_000398785.1-RS_2025_03_09 2025-03-09 6910 6529 91 na GCF_000398805.1 PRJNA224116 SAMN00839708 ASGW00000000.1 na 1169217 235 Brucella abortus 93/2 strain=93/2 na latest Scaffold Major Full 2013-05-16 Bruc_abor_93_2_V1 Broad Institute GCA_000398805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/805/GCF_000398805.1_Bruc_abor_93_2_V1/ na na na haploid bacteria 3289675 3284340 57.000000 0 10 18 NCBI RefSeq GCF_000398805.1-RS_2026_05_15 2026-05-15 3236 2988 73 na GCF_000398825.1 PRJNA224116 SAMN00847637 ASQJ00000000.1 na 1169319 1169319 Citrobacter sp. KTE30 strain=KTE30 na latest Scaffold Major Full 2013-05-16 Esch_coli_KTE30_V1 Broad Institute GCA_000398825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/825/GCF_000398825.1_Esch_coli_KTE30_V1/ na na na haploid bacteria 4902667 4882483 52.000000 0 4 16 NCBI RefSeq GCF_000398825.1-RS_2024_08_13 2024-08-13 4698 4521 112 na GCF_000398845.1 PRJNA224116 SAMN00847640 ASQK00000000.1 na 1169322 1169322 Citrobacter sp. KTE151 strain=KTE151 na latest Scaffold Major Full 2013-05-16 Esch_coli_KTE151_V1 Broad Institute GCA_000398845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/845/GCF_000398845.1_Esch_coli_KTE151_V1/ na na na haploid bacteria 5266563 5245392 52.000000 0 12 22 NCBI RefSeq GCF_000398845.1-RS_2024_08_13 2024-08-13 5067 4837 104 na GCF_000398865.1 PRJNA224116 SAMN00847668 ASQL00000000.1 na 1169350 1169350 Citrobacter sp. KTE32 strain=KTE32 na latest Scaffold Major Full 2013-05-16 Esch_coli_KTE32_V1 Broad Institute GCA_000398865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/865/GCF_000398865.1_Esch_coli_KTE32_V1/ na na na haploid bacteria 4933942 4903481 52.000000 0 5 20 NCBI RefSeq GCF_000398865.1-RS_2024_08_13 2024-08-13 4684 4519 89 na GCF_000398885.1 PRJNA224116 SAMN00847669 ASQM00000000.1 na 1169351 562 Escherichia coli KTE33 strain=KTE33 na latest Scaffold Major Full 2013-05-16 Esch_coli_KTE33_V1 Broad Institute GCA_000398885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/885/GCF_000398885.1_Esch_coli_KTE33_V1/ na na na haploid bacteria 4582906 4490742 50.500000 0 24 220 NCBI RefSeq GCF_000398885.1-RS_2025_08_15 2025-08-15 4455 4225 81 na GCF_000398905.1 PRJNA224116 SAMN00854647 ASQN00000000.1 na 1182695 1182695 Klebsiella sp. KTE92 strain=KTE92 na latest Scaffold Major Full 2013-05-16 Esch_coli_KTE92_V1 Broad Institute GCA_000398905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/905/GCF_000398905.1_Esch_coli_KTE92_V1/ na na na haploid bacteria 5471343 5433481 57.500000 0 3 34 NCBI RefSeq GCF_000398905.1-RS_2025_02_26 2025-02-26 5270 5063 98 na GCF_000398925.1 PRJNA224116 SAMN02596945 AQOB00000000.1 na 1203606 501571 Butyricicoccus pullicaecorum 1.2 strain=1.2 na latest Scaffold Major Full 2013-05-16 Buty_pull_1_20_V1 Broad Institute GCA_000398925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/925/GCF_000398925.1_Buty_pull_1_20_V1/ na na na haploid bacteria 3325721 3299517 54.000000 0 4 17 NCBI RefSeq GCF_000398925.1-RS_2026_02_04 2026-02-04 3237 3106 93 na GCF_000398945.1 PRJNA224116 SAMN02596794 AHCI00000000.1 na 718221 1396 Bacillus cereus str. Schrouff strain=Schrouff na latest Scaffold Major Full 2013-05-16 Baci_cere_Schrouff_V2 Broad Institute GCA_000398945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/945/GCF_000398945.1_Baci_cere_Schrouff_V2/ na na na haploid bacteria 6267079 6247840 35.000000 0 18 60 NCBI RefSeq GCF_000398945.1-RS_2025_03_09 2025-03-09 6384 5974 124 na GCF_000398965.1 PRJNA224116 SAMN02596837 AHDZ00000000.1 na 1053205 1396 Bacillus cereus HuA3-9 strain=HuA3-9 na latest Scaffold Major Full 2013-05-16 Baci_cere_HuA3-9_V1 Broad Institute GCA_000398965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/965/GCF_000398965.1_Baci_cere_HuA3-9_V1/ na na na haploid bacteria 6241316 6154119 35.000000 0 27 101 NCBI RefSeq GCF_000398965.1-RS_2025_03_09 2025-03-09 6422 6003 129 na GCF_000398985.1 PRJNA224116 SAMN02596836 AHDY00000000.1 na 1053204 1396 Bacillus cereus HuA2-9 strain=HuA2-9 na latest Scaffold Major Full 2013-05-16 Baci_cere_HuA2-9_V1 Broad Institute GCA_000398985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/398/985/GCF_000398985.1_Baci_cere_HuA2-9_V1/ na na na haploid bacteria 5837558 5787866 35.000000 0 8 54 NCBI RefSeq GCF_000398985.1-RS_2025_03_09 2025-03-09 6028 5659 96 na GCF_000399005.1 PRJNA224116 SAMN02596802 AHCQ00000000.1 na 1053170 1396 Bacillus cereus BAG1X1-1 strain=BAG1X1-1 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG1X1-1_G13150_V1 Broad Institute GCA_000399005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/005/GCF_000399005.1_Baci_cere_BAG1X1-1_G13150_V1/ na na na haploid bacteria 6542829 6531429 34.500000 0 13 127 NCBI RefSeq GCF_000399005.1-RS_2026_01_13 2026-01-13 6741 6340 83 na GCF_000399025.1 PRJNA224116 SAMN02596865 AHFB00000000.1 na 1053233 1396 Bacillus cereus VD133 strain=VD133 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD133_V1 Broad Institute GCA_000399025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/025/GCF_000399025.1_Baci_cere_VD133_V1/ na na na haploid bacteria 6786906 6602468 35.000000 0 23 200 NCBI RefSeq GCF_000399025.1-RS_2026_06_29 2026-06-29 7126 6467 121 na GCF_000399065.1 PRJNA224116 SAMN02596805 AHCT00000000.1 na 1053173 1396 Bacillus cereus BAG1X2-1 strain=BAG1X2-1 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG1X2-1_G13156_V1 Broad Institute GCA_000399065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/065/GCF_000399065.1_Baci_cere_BAG1X2-1_G13156_V1/ na na na haploid bacteria 6534863 6523761 34.500000 0 13 121 NCBI RefSeq GCF_000399065.1-RS_2026_01_13 2026-01-13 6706 6322 80 na GCF_000399085.1 PRJNA224116 SAMN02596806 AHCU00000000.1 na 1053174 1396 Bacillus cereus BAG1X2-2 strain=BAG1X2-2 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG1X2-2_V1 Broad Institute GCA_000399085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/085/GCF_000399085.1_Baci_cere_BAG1X2-2_V1/ na na na haploid bacteria 6858766 6770654 34.500000 0 15 81 NCBI RefSeq GCF_000399085.1-RS_2026_01_13 2026-01-13 7084 6684 130 na GCF_000399105.1 PRJNA224116 SAMN02596807 AHCV00000000.1 na 1053175 1396 Bacillus cereus BAG1X2-3 strain=BAG1X2-3 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG1X2-3_V1 Broad Institute GCA_000399105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/105/GCF_000399105.1_Baci_cere_BAG1X2-3_V1/ na na na haploid bacteria 6531739 6480968 34.500000 0 19 76 NCBI RefSeq GCF_000399105.1-RS_2026_01_13 2026-01-13 6657 6237 117 na GCF_000399125.1 PRJNA224116 SAMN02596875 AHFL00000000.1 na 1053243 1396 Bacillus cereus VD196 strain=VD196 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD196_V1 Broad Institute GCA_000399125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/125/GCF_000399125.1_Baci_cere_VD196_V1/ na na na haploid bacteria 6433030 6262705 35.000000 0 19 108 NCBI RefSeq GCF_000399125.1-RS_2026_06_22 2026-06-22 6510 6040 88 na GCF_000399145.1 PRJNA224116 SAMN02596856 AHES00000000.1 na 1053224 1396 Bacillus cereus VD021 strain=VD021 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD021_V1 Broad Institute GCA_000399145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/145/GCF_000399145.1_Baci_cere_VD021_V1/ na na na haploid bacteria 6097836 5998316 35.000000 0 14 88 NCBI RefSeq GCF_000399145.1-RS_2025_03_09 2025-03-09 6269 5871 106 na GCF_000399185.1 PRJNA224116 SAMN02596849 AHEL00000000.1 na 1053217 1396 Bacillus cereus K-5975c strain=K-5975c na latest Scaffold Major Full 2013-05-16 Baci_cere_K-5975c_V1 Broad Institute GCA_000399185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/185/GCF_000399185.1_Baci_cere_K-5975c_V1/ na na na haploid bacteria 6319750 6248515 35.000000 0 11 80 NCBI RefSeq GCF_000399185.1-RS_2025_03_09 2025-03-09 6400 5991 121 na GCF_000399245.1 PRJNA224116 SAMN02596850 AHEM00000000.1 na 1053218 1396 Bacillus cereus MC118 strain=MC118 na latest Scaffold Major Full 2013-05-16 Baci_cere_MC118_V1 Broad Institute GCA_000399245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/245/GCF_000399245.1_Baci_cere_MC118_V1/ na na na haploid bacteria 5608415 5584023 35.000000 0 179 204 NCBI RefSeq GCF_000399245.1-RS_2025_03_09 2025-03-09 5838 5414 51 na GCF_000399265.1 PRJNA224116 SAMN02596808 AHCW00000000.1 na 1053176 1396 Bacillus cereus BAG2O-1 strain=BAG2O-1 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG2O-1_G13184_V1 Broad Institute GCA_000399265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/265/GCF_000399265.1_Baci_cere_BAG2O-1_G13184_V1/ na na na haploid bacteria 6697912 6656924 34.500000 0 13 79 NCBI RefSeq GCF_000399265.1-RS_2026_01_13 2026-01-13 6903 6486 114 na GCF_000399305.1 PRJNA224116 SAMN02596843 AHEF00000000.1 na 1053211 1396 Bacillus cereus HuB4-4 strain=HuB4-4 na latest Scaffold Major Full 2013-05-16 Baci_cere_HuB4-4_V1 Broad Institute GCA_000399305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/305/GCF_000399305.1_Baci_cere_HuB4-4_V1/ na na na haploid bacteria 6544164 6409465 35.000000 0 16 115 NCBI RefSeq GCF_000399305.1-RS_2025_03_09 2025-03-09 6811 6358 121 na GCF_000399325.1 PRJNA224116 SAMN02596822 AHDK00000000.1 na 1053190 1396 Bacillus cereus BAG5X12-1 strain=BAG5X12-1 na latest Scaffold Major Full 2013-05-16 Baci_cere_BAG5X12-1_G13199_V1 Broad Institute GCA_000399325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/325/GCF_000399325.1_Baci_cere_BAG5X12-1_G13199_V1/ na na na haploid bacteria 5725826 5665192 35.000000 0 7 49 NCBI RefSeq GCF_000399325.1-RS_2026_04_18 2026-04-18 5814 5505 104 na GCF_000399345.1 PRJNA224116 SAMN02596828 AHDQ00000000.1 na 1053196 1396 Bacillus cereus BMG1.7 strain=BMG1.7 na latest Scaffold Major Full 2013-05-16 Baci_cere_BMG1_7_V1 Broad Institute GCA_000399345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/345/GCF_000399345.1_Baci_cere_BMG1_7_V1/ na na na haploid bacteria 6496494 6394988 35.000000 0 39 135 NCBI RefSeq GCF_000399345.1-RS_2025_08_01 2025-08-01 6662 6219 99 na GCF_000399365.1 PRJNA224116 SAMN02596840 AHEC00000000.1 na 1053208 1396 Bacillus cereus HuB13-1 strain=HuB13-1 na latest Scaffold Major Full 2013-05-16 Baci_cere_HuB13-1_V1 Broad Institute GCA_000399365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/365/GCF_000399365.1_Baci_cere_HuB13-1_V1/ na na na haploid bacteria 6729889 6599708 35.000000 0 48 151 NCBI RefSeq GCF_000399365.1-RS_2026_06_29 2026-06-29 6902 6421 125 na GCF_000399425.1 PRJNA224116 SAMN02596868 AHFE00000000.1 na 1053236 1396 Bacillus cereus VD146 strain=VD146 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD146_V1 Broad Institute GCA_000399425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/425/GCF_000399425.1_Baci_cere_VD146_V1/ na na na haploid bacteria 6109375 6059536 35.000000 0 21 76 NCBI RefSeq GCF_000399425.1-RS_2025_03_09 2025-03-09 6294 5902 110 na GCF_000399505.1 PRJNA224116 SAMN02596847 AHEJ00000000.1 na 1053215 1396 Bacillus cereus ISP2954 strain=ISP2954 na latest Scaffold Major Full 2013-05-16 Baci_cere_ISP2954_V1 Broad Institute GCA_000399505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/505/GCF_000399505.1_Baci_cere_ISP2954_V1/ na na na haploid bacteria 6746442 6646514 35.000000 0 51 138 NCBI RefSeq GCF_000399505.1-RS_2026_06_29 2026-06-29 6970 6489 121 na GCF_000399525.1 PRJNA224116 SAMN02596863 AHEZ00000000.1 na 1053231 1396 Bacillus cereus VD118 strain=VD118 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD118_V1 Broad Institute GCA_000399525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/525/GCF_000399525.1_Baci_cere_VD118_V1/ na na na haploid bacteria 5782949 5686244 35.500000 0 10 71 NCBI RefSeq GCF_000399525.1-RS_2025_03_08 2025-03-08 5985 5495 120 na GCF_000399545.1 PRJNA224116 SAMN02596867 AHFD00000000.1 na 1053235 1396 Bacillus cereus VD140 strain=VD140 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD140_V1 Broad Institute GCA_000399545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/545/GCF_000399545.1_Baci_cere_VD140_V1/ na na na haploid bacteria 5709397 5657298 35.000000 0 16 65 NCBI RefSeq GCF_000399545.1-RS_2026_04_18 2026-04-18 5837 5522 99 na GCF_000399565.1 PRJNA224116 SAMN02596874 AHFK00000000.1 na 1053242 1396 Bacillus cereus VD184 strain=VD184 na latest Scaffold Major Full 2013-05-16 Baci_cere_VD184_V1 Broad Institute GCA_000399565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/565/GCF_000399565.1_Baci_cere_VD184_V1/ na na na haploid bacteria 6332031 6281808 35.000000 0 47 119 NCBI RefSeq GCF_000399565.1-RS_2026_06_22 2026-06-22 6630 6235 99 na GCF_000399665.1 PRJNA224116 SAMN01828158 APQJ00000000.1 na 1217690 471 Acinetobacter calcoaceticus ANC 3811 strain=ANC 3811 na latest Scaffold Major Full 2013-05-16 Acin_calc_ANC_3811_V1 Broad Institute GCA_000399665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/665/GCF_000399665.1_Acin_calc_ANC_3811_V1/ na na na haploid bacteria 3827685 3824391 38.500000 0 2 14 NCBI RefSeq GCF_000399665.1-RS_2025_02_19 2025-02-19 3665 3500 97 na GCF_000399685.1 PRJNA224116 SAMN01828157 APQM00000000.1 na 1217691 48296 Acinetobacter pittii ANC 4050 strain=ANC 4050 na latest Scaffold Major Full 2013-05-16 Acin_pitt_ANC_4050_V1 Broad Institute GCA_000399685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/685/GCF_000399685.1_Acin_pitt_ANC_4050_V1/ na na na haploid bacteria 3836826 3830551 39.000000 0 1 12 NCBI RefSeq GCF_000399685.1-RS_2025_02_26 2025-02-26 3641 3509 90 na GCF_000399725.1 PRJNA224116 SAMN00811183 ASGX00000000.1 na 1160190 235 Brucella abortus I103_(UK3/01) strain=I103_(UK3/01) na latest Contig Major Full 2013-05-16 Bruc_abor_I103_UK3_01_V1 Broad Institute GCA_000399725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/399/725/GCF_000399725.1_Bruc_abor_I103_UK3_01_V1/ na na na haploid bacteria 3286244 3286244 57.000000 0 6 6 NCBI RefSeq GCF_000399725.1-RS_2026_05_16 2026-05-16 3231 2983 68 na GCF_000400145.1 PRJNA224116 SAMN02472050 ALVF00000000.1 na 1201034 111504 Bartonella birtlesii E7 strain=E7 na latest Scaffold Major Full 2013-05-20 ASM40014v1 URMITE GCA_000400145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/145/GCF_000400145.1_ASM40014v1/ na na na haploid bacteria 1830956 1793151 37.500000 0 11 66 NCBI RefSeq GCF_000400145.1-RS_2026_06_10 2026-06-10 1614 1314 46 23611908 GCF_000400165.1 PRJNA224116 SAMN02472047 ALVG00000000.1 na 1201035 111504 Bartonella birtlesii E11 strain=E11 na latest Scaffold Major Full 2013-05-20 ASM40016v1 URMITE GCA_000400165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/165/GCF_000400165.1_ASM40016v1/ na na na haploid bacteria 1840919 1800483 37.500000 0 9 58 NCBI RefSeq GCF_000400165.1-RS_2026_06_10 2026-06-10 1612 1279 46 23611908 GCF_000400185.1 PRJNA224116 SAMN02472048 ALVH00000000.1 na 1202451 111504 Bartonella birtlesii E4 strain=E4 na latest Scaffold Major Full 2013-05-20 ASM40018v1 URMITE GCA_000400185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/185/GCF_000400185.1_ASM40018v1/ na na na haploid bacteria 1837079 1796413 37.500000 0 9 55 NCBI RefSeq GCF_000400185.1-RS_2026_06_10 2026-06-10 1598 1468 46 23611908 GCF_000400205.1 PRJNA224116 SAMD00036652 BANY00000000.1 na 1279999 680 Vibrio campbellii 200612B strain=200612B na latest Scaffold Major Full 2013-05-15 ASM40020v1 University of Miyazaki GCA_000400205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/205/GCF_000400205.1_ASM40020v1/ na na na haploid bacteria 5828972 5828962 45.500000 0 229 230 NCBI RefSeq GCF_000400205.1-RS_2025_09_09 2025-09-09 5387 5177 143 23710045 GCF_000400225.1 PRJNA224116 SAMD00036653 BANZ00000000.1 na 1280000 696485 Vibrio owensii ATCC 25919 strain=ATCC 25919 na latest Scaffold Major Full 2013-05-15 ASM40022v1 University of Miyazaki GCA_000400225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/225/GCF_000400225.1_ASM40022v1/ na na na haploid bacteria 5804520 5804510 45.500000 0 174 175 NCBI RefSeq GCF_000400225.1-RS_2025_09_09 2025-09-09 5299 5102 149 23710045 GCF_000400245.1 PRJNA224116 SAMD00036654 BAOA00000000.1 na 1280001 766224 Vibrio jasicida MWB 21 strain=MWB 21 na latest Scaffold Major Full 2013-05-15 ASM40024v1 University of Miyazaki GCA_000400245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/245/GCF_000400245.1_ASM40024v1/ na na na haploid bacteria 5967562 5967552 45.000000 0 282 283 NCBI RefSeq GCF_000400245.1-RS_2025_08_08 2025-08-08 5476 5242 149 23710045 GCF_000400265.1 PRJNA224116 SAMD00036655 BAOB00000000.1 na 1219077 512649 Vibrio azureus NBRC 104587 strain=NBRC 104587 na latest Scaffold Major Full 2013-05-15 ASM40026v1 University of Miyazaki GCA_000400265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/265/GCF_000400265.1_ASM40026v1/ na assembly from type material na haploid bacteria 4768656 4768626 42.500000 0 783 786 NCBI RefSeq GCF_000400265.1-RS_2025_08_03 2025-08-03 4495 4187 114 23710045 GCF_000400285.1 PRJNA224116 SAMD00036656 BAOC00000000.1 na 1280002 766224 Vibrio jasicida 090810c strain=090810c na latest Scaffold Major Full 2013-05-15 ASM40028v1 University of Miyazaki GCA_000400285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/285/GCF_000400285.1_ASM40028v1/ na na na haploid bacteria 5954450 5954440 45.000000 0 168 169 NCBI RefSeq GCF_000400285.1-RS_2025_09_09 2025-09-09 5417 5234 139 23710045 GCF_000400305.1 PRJNA224116 SAMD00036657 BAOD00000000.1 na 1219071 669 Vibrio harveyi NBRC 15634 = ATCC 14126 = KCTC 12724 strain=NBRC 15634 = ATCC 14126 na latest Scaffold Major Full 2013-05-15 ASM40030v1 University of Miyazaki GCA_000400305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/305/GCF_000400305.1_ASM40030v1/ na assembly from type material na haploid bacteria 5670000 5669990 45.000000 0 245 246 NCBI RefSeq GCF_000400305.1-RS_2025_09_09 2025-09-09 5243 5035 133 23710045 GCF_000400325.1 PRJNA224116 SAMD00036658 BAOE00000000.1 na 1280004 696485 Vibrio owensii LMG 25430 strain=LMG 25430 na latest Scaffold Major Full 2013-05-15 ASM40032v1 University of Miyazaki GCA_000400325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/325/GCF_000400325.1_ASM40032v1/ na assembly from heterotypic synonym type material na haploid bacteria 5824957 5824947 45.500000 0 341 342 NCBI RefSeq GCF_000400325.1-RS_2025_09_09 2025-09-09 5216 5108 53 23710045 GCF_000400345.1 PRJNA224116 SAMD00036659 BAOF00000000.1 na 1224742 680 Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain=CAIM 519 = NBRC 15631 na latest Scaffold Major Full 2013-05-15 ASM40034v1 University of Miyazaki GCA_000400345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/345/GCF_000400345.1_ASM40034v1/ na assembly from type material na haploid bacteria 5116899 5116889 45.000000 0 387 388 NCBI RefSeq GCF_000400345.1-RS_2025_08_12 2025-08-12 4748 4518 42 23710045 GCF_000400365.1 PRJNA224116 SAMD00036660 BAOG00000000.1 na 1229494 766224 Vibrio jasicida CAIM 1864 = LMG 25398 strain=CAIM 1864 = LMG 25398 na latest Scaffold Major Full 2013-05-15 ASM40036v1 University of Miyazaki GCA_000400365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/365/GCF_000400365.1_ASM40036v1/ na assembly from type material na haploid bacteria 6052299 6052289 45.000000 0 278 279 NCBI RefSeq GCF_000400365.1-RS_2025_08_08 2025-08-08 5539 5345 135 23710045 GCF_000400385.1 PRJNA224116 SAMD00036661 BAOH00000000.1 na 1229493 696485 Vibrio owensii CAIM 1854 = LMG 25443 strain=CAIM 1854 = LMG 25443 na latest Contig Major Full 2013-05-15 ASM40038v1 University of Miyazaki GCA_000400385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/385/GCF_000400385.1_ASM40038v1/ na assembly from type material na haploid bacteria 6366855 6366855 45.000000 0 451 451 NCBI RefSeq GCF_000400385.1-RS_2024_09_03 2024-09-03 5980 5765 46 23710045 GCF_000400405.1 PRJNA224116 SAMD00036662 BAOI00000000.1 na 1224743 190895 Vibrio rotiferianus CAIM 577 = LMG 21460 strain=CAIM 577 = LMG 21460 na latest Scaffold Major Full 2013-05-15 ASM40040v1 University of Miyazaki GCA_000400405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/405/GCF_000400405.1_ASM40040v1/ na assembly from type material na haploid bacteria 5316232 5316212 44.500000 0 318 320 NCBI RefSeq GCF_000400405.1-RS_2025_09_09 2025-09-09 4960 4734 132 23710045 GCF_000400425.1 PRJNA224116 SAMD00036663 BAOJ00000000.1 na 1219064 512650 Vibrio sagamiensis NBRC 104589 strain=NBRC 104589 na latest Scaffold Major Full 2013-05-15 ASM40042v1 University of Miyazaki GCA_000400425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/425/GCF_000400425.1_ASM40042v1/ na assembly from type material na haploid bacteria 4557580 4557570 40.500000 0 504 505 NCBI RefSeq GCF_000400425.1-RS_2025_09_09 2025-09-09 4149 3950 43 23710045 GCF_000400465.1 PRJNA215734 SAMN02981518 APLC00000000.1 reference genome 1299270 245174 Wallemia ichthyophaga EXF-994 strain=EXF-994 na latest Scaffold Major Full 2013-05-20 Wallemia ichthyophaga version 1.0 BGI GCA_000400465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/465/GCF_000400465.1_Wallemia_ichthyophaga_version_1.0/ na assembly designated as neotype na haploid fungi 9655632 9624672 45.500000 0 82 101 BGI Annotation submitted by BGI 2023-09-15 5000 4863 127 24034603 GCF_000400485.1 PRJNA224116 SAMN02471611 ASHR00000000.1 reference genome 1330458 1346502 Agrococcus pavilionensis RW1 strain=RW1 na latest Contig Major Full 2013-05-20 k0-k1250 University of British Columbia GCA_000400485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/485/GCF_000400485.1_k0-k1250/ na assembly from type material na haploid bacteria 2878403 2878403 72.500000 0 50 50 NCBI RefSeq GCF_000400485.1-RS_2025_12_09 2025-12-09 2871 2789 53 23814108 GCF_000400505.1 PRJNA224116 SAMN02470088 AONV00000000.1 na 1224150 69223 Musicola paradisiaca NCPPB 2511 strain=NCPPB 2511 na latest Chromosome Major Full 2013-05-22 DPA2511_1.0 James Hutton Institute GCA_000400505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/505/GCF_000400505.1_DPA2511_1.0/ na assembly from type material na haploid bacteria 4631867 4627367 55.000000 1 1 45 NCBI RefSeq GCF_000400505.1-RS_2025_12_03 2025-12-03 4117 3867 74 24265502 GCF_000400525.1 PRJNA224116 SAMN02470083 AONW00000000.1 na 1224147 204042 Dickeya zeae NCPPB 3532 strain=NCPPB 3532 na latest Chromosome Major Full 2013-05-22 DZE3532_1.0 James Hutton Institute GCA_000400525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/525/GCF_000400525.1_DZE3532_1.0/ na na na haploid bacteria 4557062 4555162 53.500000 1 1 19 NCBI RefSeq GCF_000400525.1-RS_2026_01_30 2026-01-30 4108 3969 80 24265502 GCF_000400565.1 PRJNA224116 SAMN02470092 AONX00000000.1 na 1226344 1089444 Dickeya solani GBBC 2040 strain=GBBC 2040 na latest Chromosome Major Full 2013-05-22 DSOGBBC2040_1.0 James Hutton Institute GCA_000400565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/565/GCF_000400565.1_DSOGBBC2040_1.0/ na na na haploid bacteria 4860047 4832847 56.500000 1 1 272 NCBI RefSeq GCF_000400565.1-RS_2026_01_30 2026-01-30 4341 4110 73 23887905 GCF_000400615.1 PRJNA224116 SAMN02603646 na na 443149 1773 Mycobacterium tuberculosis CCDC5079 strain=CCDC5079 na latest Complete Genome Major Full 2013-05-20 ASM40061v1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention GCA_000400615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/615/GCF_000400615.1_ASM40061v1/ na na na haploid bacteria 4414325 4414325 65.500000 1 1 1 NCBI RefSeq GCF_000400615.1-RS_2025_06_29 2025-06-29 4161 3901 51 23627759 GCF_000400635.2 PRJNA224116 SAMN02603859 na reference genome 129921 129921 Amycolatopsis keratiniphila strain=HCCB10007 na latest Complete Genome Major Full 2014-02-18 ASM40063v2 Shanghai institute of pharmaceutical industry GCA_000400635.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/635/GCF_000400635.2_ASM40063v2/ na na na haploid bacteria 8982090 8982090 69.000000 2 2 2 NCBI RefSeq GCF_000400635.2-RS_2026_03_30 2026-03-30 8313 8203 65 23627759;24884615 GCF_000400715.1 PRJNA224116 SAMN01087863 AQFL00000000.1 na 106651 106651 Acinetobacter genomosp. 15BJ strain=CIP 110321 na latest Scaffold Major Full 2013-05-30 Acin_sp_CIP_110321_V1 Broad Institute GCA_000400715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/715/GCF_000400715.1_Acin_sp_CIP_110321_V1/ na na na haploid bacteria 4303137 4275319 40.500000 0 8 29 NCBI RefSeq GCF_000400715.1-RS_2025_02_19 2025-02-19 4073 3838 105 na GCF_000400735.1 PRJNA224116 SAMN01087852 AQFM00000000.1 na 1120927 202954 Acinetobacter tandoii DSM 14970 = CIP 107469 strain=CIP 107469 na latest Scaffold Major Full 2013-05-30 Acin_tand_CIP_107469_V1 Broad Institute GCA_000400735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/735/GCF_000400735.1_Acin_tand_CIP_107469_V1/ na assembly from type material na haploid bacteria 4078922 4060687 40.000000 0 28 50 NCBI RefSeq GCF_000400735.1-RS_2025_12_23 2025-12-23 3994 3816 85 na GCF_000400795.1 PRJNA224116 SAMN02470091 AONU00000000.1 na 1225786 1089444 Dickeya solani IPO 2222 strain=IPO 2222 na latest Chromosome Major Full 2013-05-22 DSOIPO2222_1.0 James Hutton Institute GCA_000400795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/795/GCF_000400795.1_DSOIPO2222_1.0/ na assembly from type material na haploid bacteria 4867258 4858058 56.000000 1 1 92 NCBI RefSeq GCF_000400795.1-RS_2026_04_23 2026-04-23 4318 4104 73 23887905 GCF_000400855.1 PRJNA224116 SAMN02603324 na na 1116211 2099 Mesomycoplasma hyopneumoniae 168-L strain=168-L na latest Complete Genome Major Full 2013-05-22 ASM40085v1 Huazhong Agricultural University GCA_000400855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/855/GCF_000400855.1_ASM40085v1/ na na na haploid bacteria 921093 921093 28.500000 1 1 1 NCBI RefSeq GCF_000400855.1-RS_2026_02_26 2026-02-26 744 697 36 23384176 GCF_000400875.1 PRJNA224116 SAMN02603674 na na 469607 76859 Fusobacterium animalis 4_8 strain=4_8 na latest Complete Genome Major Full 2013-05-22 ASM40087v1 Broad Institute GCA_000400875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/875/GCF_000400875.1_ASM40087v1/ na na na haploid bacteria 2275461 2275461 27.000000 2 2 2 NCBI RefSeq GCF_000400875.1-RS_2026_04_14 2026-04-14 2178 2036 64 na GCF_000400895.2 PRJNA224116 SAMN00829493 AQAM00000000.1 na 1116164 562 Escherichia coli P0304777.2 strain=P0304777.2 na latest Contig Minor Full 2013-04-08 ASM40089v2 IGS GCA_000400895.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/895/GCF_000400895.2_ASM40089v2/ na na na haploid bacteria 5086737 5086737 50.500000 0 214 214 NCBI RefSeq GCF_000400895.2-RS_2025_06_17 2025-06-17 5197 4770 113 na GCF_000400935.1 PRJNA224116 SAMN02602968 na reference genome 1276227 216933 Spiroplasma chrysopicola DF-1 strain=DF-1 na latest Complete Genome Major Full 2013-05-22 ASM40093v1 Academia Sinica GCA_000400935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/935/GCF_000400935.1_ASM40093v1/ na assembly from type material na haploid bacteria 1123322 1123322 29.000000 1 1 1 NCBI RefSeq GCF_000400935.1-RS_2025_12_11 2025-12-11 1063 1020 39 23711669 GCF_000400955.1 PRJNA224116 SAMN02602969 na reference genome 1276229 216945 Spiroplasma syrphidicola EA-1 strain=EA-1 na latest Complete Genome Major Full 2013-05-22 ASM40095v1 Academia Sinica GCA_000400955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/955/GCF_000400955.1_ASM40095v1/ na assembly from type material na haploid bacteria 1107344 1107344 29.000000 1 1 1 NCBI RefSeq GCF_000400955.1-RS_2025_12_11 2025-12-11 1046 1006 38 23711669 GCF_000400975.1 PRJNA224116 SAMD00036650 BANO00000000.1 na 1261545 489138 Halarchaeum acidiphilum MH1-52-1 strain=MH1-52-1 na latest Contig Major Full 2013-05-16 ASM40097v1 Japan Agency for Marine-Earth Science and Technology GCA_000400975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/975/GCF_000400975.1_ASM40097v1/ na assembly from type material na haploid archaea 2431759 2431759 67.000000 0 537 537 NCBI RefSeq GCF_000400975.1-RS_2025_12_02 2025-12-02 2887 2388 45 na GCF_000400995.2 PRJNA224116 SAMD00010747 BANP00000000.1 na 1268622 1268622 Acidovorax sp. MR-S7 strain=MR-S7 na latest Scaffold Major Full 2013-07-17 ASM40099v2 AIST GCA_000400995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/400/995/GCF_000400995.2_ASM40099v2/ na na na haploid bacteria 5008891 5007754 68.500000 0 117 130 NCBI RefSeq GCF_000400995.2-RS_2024_08_13 2024-08-13 4836 4667 60 23814112 GCF_000401075.2 PRJNA224116 SAMN02471840 APLK00000000.2 na 1290415 28450 Burkholderia pseudomallei OB strain=OB na latest Scaffold Major Full 2021-12-27 ASM40107v2 Universiti Malaya, Kuala Lumpur GCA_000401075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/075/GCF_000401075.2_ASM40107v2/ na na na haploid bacteria 7108596 7104877 68.000000 0 242 279 NCBI RefSeq GCF_000401075.2-RS_2025_04_20 2025-04-20 6508 6217 61 34910764 GCF_000401095.2 PRJNA224116 SAMN02471850 APLL00000000.2 na 1290414 28450 Burkholderia pseudomallei OS strain=OS na latest Scaffold Major Full 2021-12-27 ASM40109v2 Universiti Malaya, Kuala Lumpur GCA_000401095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/095/GCF_000401095.2_ASM40109v2/ na na na haploid bacteria 7106305 7102194 68.000000 0 241 283 NCBI RefSeq GCF_000401095.2-RS_2025_04_20 2025-04-20 6513 6217 67 34910764 GCF_000401115.2 PRJNA224116 SAMN02471860 APLM00000000.2 na 1290413 28450 Burkholderia pseudomallei CB strain=CB na latest Scaffold Major Full 2021-12-27 ASM40111v2 Universiti Malaya, Kuala Lumpur GCA_000401115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/115/GCF_000401115.2_ASM40111v2/ na na na haploid bacteria 7140716 7134323 68.000000 0 224 287 NCBI RefSeq GCF_000401115.2-RS_2025_08_07 2025-08-07 6557 6276 61 34910764 GCF_000401135.2 PRJNA224116 SAMN02471846 APLN00000000.2 na 1290412 28450 Burkholderia pseudomallei CS strain=CS na latest Scaffold Major Full 2021-12-27 ASM40113v2 Universiti Malaya, Kuala Lumpur GCA_000401135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/135/GCF_000401135.2_ASM40113v2/ na na na haploid bacteria 7029617 7026034 68.000000 0 240 271 NCBI RefSeq GCF_000401135.2-RS_2025_04_20 2025-04-20 6541 6250 61 34910764 GCF_000401175.1 PRJNA224116 SAMN02604286 na na 1321370 135577 Idiomarina loihiensis GSL 199 strain=GSL 199 na latest Complete Genome Major Full 2013-05-23 ASM40117v1 Utah State University GCA_000401175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/175/GCF_000401175.1_ASM40117v1/ na na na haploid bacteria 2839759 2839759 47.000000 1 1 1 NCBI RefSeq GCF_000401175.1-RS_2026_02_08 2026-02-08 2722 2639 72 na GCF_000401195.1 PRJNA224116 SAMN02141978 AQQA00000000.1 na 1284788 573 Klebsiella pneumoniae UHKPC23 strain=UHKPC23 na latest Contig Major Full 2013-05-23 gkp2v01 JCVI GCA_000401195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/195/GCF_000401195.1_gkp2v01/ na na na haploid bacteria 5503448 5503448 57.000000 0 195 195 NCBI RefSeq GCF_000401195.1-RS_2025_01_05 2025-01-05 5572 5385 56 24913165 GCF_000401215.1 PRJNA224116 SAMN02469632 ASRV00000000.1 na 1202534 84031 Clostridium sartagoforme AAU1 strain=AAU1 na latest Contig Major Full 2013-05-23 CloSarAAU1 Anand Agricultural University GCA_000401215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/215/GCF_000401215.1_CloSarAAU1/ na na na haploid bacteria 3983371 3983371 28.000000 0 323 323 NCBI RefSeq GCF_000401215.1-RS_2026_04_14 2026-04-14 4086 3815 77 na GCF_000401255.1 PRJNA224116 SAMN02469646 AQPR00000000.1 na 1321368 1321368 Xanthomonas maliensis strain=M97 na latest Contig Major Full 2013-05-23 Xanthomonas sp. 97M Colorado State University GCA_000401255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/255/GCF_000401255.1_Xanthomonas_sp._97M/ na assembly from type material na haploid bacteria 4965572 4965572 66.500000 0 1285 1285 NCBI RefSeq GCF_000401255.1-RS_2026_05_05 2026-05-05 4857 4452 52 25588569 GCF_000401295.1 PRJNA224116 SAMN02471799 AONJ00000000.1 na 1282880 210 Helicobacter pylori NAK7 strain=NAK7 na latest Contig Major Full 2013-05-24 HelPylNAK7 1.0 University of Hyderabad GCA_000401295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/295/GCF_000401295.1_HelPylNAK7_1.0/ na na na haploid bacteria 1586710 1586710 39.000000 0 68 68 NCBI RefSeq GCF_000401295.1-RS_2026_01_13 2026-01-13 1580 1449 43 na GCF_000401315.1 PRJNA224116 SAMN02471803 AONK00000000.1 na 1287061 210 Helicobacter pylori UM018 strain=UM018 na latest Contig Major Full 2013-05-24 HelPylUM018 1.0 University of Hyderabad GCA_000401315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/315/GCF_000401315.1_HelPylUM018_1.0/ na na na haploid bacteria 1614546 1614546 39.000000 0 72 72 NCBI RefSeq GCF_000401315.1-RS_2026_01_15 2026-01-15 1599 1449 43 na GCF_000401335.1 PRJNA224116 SAMN02471804 AONL00000000.1 na 1287062 210 Helicobacter pylori UM054 strain=UM054 na latest Contig Major Full 2013-05-24 HelPylUM054 1.0 University of Hyderabad GCA_000401335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/335/GCF_000401335.1_HelPylUM054_1.0/ na na na haploid bacteria 1594474 1594474 39.000000 0 81 81 NCBI RefSeq GCF_000401335.1-RS_2026_01_13 2026-01-13 1584 1439 42 na GCF_000401355.1 PRJNA224116 SAMN02471798 AONM00000000.1 na 1287063 210 Helicobacter pylori UM007 strain=UM007 na latest Contig Major Full 2013-05-24 HelPylUM007 1.0 University of Hyderabad GCA_000401355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/355/GCF_000401355.1_HelPylUM007_1.0/ na na na haploid bacteria 1575854 1575854 39.000000 0 72 72 NCBI RefSeq GCF_000401355.1-RS_2026_01_13 2026-01-13 1556 1431 42 na GCF_000401375.1 PRJNA224116 SAMN02471800 AONN00000000.1 na 1287064 210 Helicobacter pylori UM034 strain=UM034 na latest Contig Major Full 2013-05-24 HelPylUM034 1.0 University of Hyderabad GCA_000401375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/375/GCF_000401375.1_HelPylUM034_1.0/ na na na haploid bacteria 1608430 1608430 38.500000 0 65 65 NCBI RefSeq GCF_000401375.1-RS_2026_01_13 2026-01-13 1574 1445 42 na GCF_000401395.1 PRJNA224116 SAMN02471801 AONO00000000.1 na 1287065 210 Helicobacter pylori UM045 strain=UM045 na latest Contig Major Full 2013-05-24 HelPylUM045 1.0 University of Hyderabad GCA_000401395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/395/GCF_000401395.1_HelPylUM045_1.0/ na na na haploid bacteria 1594207 1594207 39.000000 0 59 59 NCBI RefSeq GCF_000401395.1-RS_2026_01_13 2026-01-13 1568 1444 42 na GCF_000401415.1 PRJNA224116 SAMN02470766 ASAN00000000.1 na 1216967 238 Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 strain=ATCC 13253 na latest Contig Major Full 2013-05-24 ASM40141v1 Oklahoma State University GCA_000401415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/415/GCF_000401415.1_ASM40141v1/ na assembly from type material na haploid bacteria 3796928 3796928 36.500000 0 115 115 NCBI RefSeq GCF_000401415.1-RS_2026_01_06 2026-01-06 3486 3383 51 23846266 GCF_000401435.1 PRJNA224116 SAMN02470727 AHZH00000000.1 na 1137129 1280 Staphylococcus aureus subsp. aureus 091751 strain=91751 na latest Contig Major Full 2013-05-24 ASM40143v1 Novartis Vaccines and Diagnostics GCA_000401435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/435/GCF_000401435.1_ASM40143v1/ na na na haploid bacteria 2824513 2824513 32.500000 0 132 132 NCBI RefSeq GCF_000401435.1-RS_2025_02_11 2025-02-11 2906 2769 14 na GCF_000401455.1 PRJNA224116 SAMN02470734 AHZJ00000000.1 na 1137131 1280 Staphylococcus aureus subsp. aureus 122051 strain=122051 na latest Contig Major Full 2013-05-24 ASM40145v1 Novartis Vaccines and Diagnostics GCA_000401455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/455/GCF_000401455.1_ASM40145v1/ na na na haploid bacteria 2745390 2745390 32.500000 0 140 140 NCBI RefSeq GCF_000401455.1-RS_2025_01_09 2025-01-09 2756 2633 10 na GCF_000401475.1 PRJNA224116 SAMN02470733 AHZL00000000.1 na 1137133 1280 Staphylococcus aureus subsp. aureus MRGR3 strain=MRGR3 na latest Contig Major Full 2013-05-24 ASM40147v1 Novartis Vaccines and Diagnostics GCA_000401475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/475/GCF_000401475.1_ASM40147v1/ na na na haploid bacteria 3003332 3003332 32.500000 0 112 112 NCBI RefSeq GCF_000401475.1-RS_2026_03_08 2026-03-08 3051 2946 21 na GCF_000401495.1 PRJNA224116 SAMN02470567 AQOS00000000.1 na 1316935 274 Thermus thermophilus ATCC 33923 strain=ATCC 33923 na latest Contig Major Full 2013-05-24 ASM40149v1 Nanjing University of Technology GCA_000401495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/495/GCF_000401495.1_ASM40149v1/ na na na haploid bacteria 2146664 2146664 69.500000 0 112 112 NCBI RefSeq GCF_000401495.1-RS_2026_03_28 2026-03-28 2373 2231 52 23887916 GCF_000401515.2 PRJNA224116 SAMN02471204 ASSK00000000.2 na 1227812 1238 Piscirickettsia salmonis LF-89 = ATCC VR-1361 strain=LF-89 na latest Contig Major Full 2013-09-26 ASM40151v2 University of Texas at San Antonio GCA_000401515.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/515/GCF_000401515.2_ASM40151v2/ na assembly from type material na haploid bacteria 2805478 2805478 39.500000 0 355 355 NCBI RefSeq GCF_000401515.2-RS_2026_02_02 2026-02-02 3045 2814 59 24201203 GCF_000401555.1 PRJNA224116 SAMN02603614 na na 1288394 644 Aeromonas hydrophila ML09-119 strain=ML09-119 na latest Complete Genome Major Full 2013-05-24 ASM40155v1 Mississippi State University GCA_000401555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/555/GCF_000401555.1_ASM40155v1/ na na na haploid bacteria 5024500 5024500 61.000000 1 1 1 NCBI RefSeq GCF_000401555.1-RS_2025_12_15 2025-12-15 4661 4441 150 24051325 GCF_000401575.1 PRJNA224116 SAMN02470726 AHZI00000000.1 na 1137130 1280 Staphylococcus aureus subsp. aureus 103564 strain=103564 na latest Contig Major Full 2013-05-24 ASM40157v1 Novartis Vaccines and Diagnostics GCA_000401575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/575/GCF_000401575.1_ASM40157v1/ na na na haploid bacteria 2756365 2756365 32.500000 0 142 142 NCBI RefSeq GCF_000401575.1-RS_2026_02_24 2026-02-24 2775 2657 22 na GCF_000401595.1 PRJNA224116 SAMN02470730 AHZK00000000.1 na 1137132 1280 Staphylococcus aureus subsp. aureus 112808A strain=112808A na latest Contig Major Full 2013-05-24 ASM40159v1 Novartis Vaccines and Diagnostics GCA_000401595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/595/GCF_000401595.1_ASM40159v1/ na na na haploid bacteria 2772919 2772919 33.000000 0 78 78 NCBI RefSeq GCF_000401595.1-RS_2025_01_09 2025-01-09 2764 2639 30 na GCF_000401735.2 PRJNA224116 SAMN02469931 na na 1281282 339 Xanthomonas campestris pv. campestris str. CN14 strain=CN14 na latest Complete Genome Major Full 2017-11-16 ASM40173v2 CNRS GCA_000401735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/735/GCF_000401735.2_ASM40173v2/ na na na haploid bacteria 5082555 5082555 65.000000 2 2 2 NCBI RefSeq GCF_000401735.2-RS_2026_05_31 2026-05-31 4481 4166 140 na GCF_000401755.1 PRJNA224116 SAMN02471031 ASHD00000000.1 na 1322345 562 Escherichia coli ATCC 25922 strain=ATCC 25922 na latest Contig Major Full 2013-05-28 Escherichia coli ATCC 25922 Technical University of Denmark GCA_000401755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/755/GCF_000401755.1_Escherichia_coli_ATCC_25922/ na na na haploid bacteria 5113276 5113276 50.500000 0 116 116 NCBI RefSeq GCF_000401755.1-RS_2025_05_23 2025-05-23 5020 4708 72 24040003 GCF_000401915.1 PRJNA224116 SAMN02471029 AOSG00000000.1 na 1169414 2021 Thermobifida fusca TM51 strain=TM51 na latest Contig Major Full 2013-05-28 ASM40191v1 BAYGEN GCA_000401915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/915/GCF_000401915.1_ASM40191v1/ na na na haploid bacteria 3599272 3599272 67.500000 0 88 88 NCBI RefSeq GCF_000401915.1-RS_2025_12_03 2025-12-03 3182 3070 67 23846276 GCF_000401935.1 PRJNA224116 SAMN02403949 ASHV00000000.1 na 1329365 630 Yersinia enterocolitica subsp. palearctica YE-149 strain=YE-149 na latest Contig Major Full 2013-05-28 YE-149_1.0 Max von Pettenkofer-Institut GCA_000401935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/935/GCF_000401935.1_YE-149_1.0/ na na na haploid bacteria 4541921 4541921 47.000000 0 100 100 NCBI RefSeq GCF_000401935.1-RS_2026_03_28 2026-03-28 4236 3868 96 23846271 GCF_000401955.1 PRJNA224116 SAMN02403948 ASHU00000000.1 na 1329364 630 Yersinia enterocolitica subsp. palearctica YE-P4 strain=YE-P4 na latest Contig Major Full 2013-05-28 YE-P4_1.0 Max von Pettenkofer-Institut GCA_000401955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/955/GCF_000401955.1_YE-P4_1.0/ na na na haploid bacteria 4449778 4449778 47.000000 0 95 95 NCBI RefSeq GCF_000401955.1-RS_2026_03_28 2026-03-28 4135 3793 99 23846271 GCF_000401975.1 PRJNA224116 SAMN02403947 ASHT00000000.1 na 1329363 630 Yersinia enterocolitica subsp. palearctica YE-P1 strain=YE-P1 na latest Contig Major Full 2013-05-28 YE-P1_1.0 Max von Pettenkofer-Institut GCA_000401975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/975/GCF_000401975.1_YE-P1_1.0/ na na na haploid bacteria 4550830 4550830 47.000000 0 86 86 NCBI RefSeq GCF_000401975.1-RS_2026_03_28 2026-03-28 4240 3870 103 23846271 GCF_000401995.1 PRJNA224116 SAMN02403950 ASHW00000000.1 na 1329366 630 Yersinia enterocolitica subsp. palearctica YE-150 strain=YE-150 na latest Contig Major Full 2013-05-28 YE-150_1.0 Max von Pettenkofer-Institut GCA_000401995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/401/995/GCF_000401995.1_YE-150_1.0/ na na na haploid bacteria 4464171 4464171 47.000000 0 96 96 NCBI RefSeq GCF_000401995.1-RS_2026_03_28 2026-03-28 4147 3799 97 23846271 GCF_000402035.1 PRJNA224116 SAMD00012854 na reference genome 758793 758793 Caballeronia insecticola strain=RPE64 na latest Complete Genome Major Full 2013-05-21 ASM40203v1 National Institute for Basic Biology GCA_000402035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/402/035/GCF_000402035.1_ASM40203v1/ na assembly from type material na haploid bacteria 6964487 6964487 63.000000 5 5 5 NCBI RefSeq GCF_000402035.1-RS_2025_12_13 2025-12-13 6449 6313 81 23833137;29863457 GCF_000403115.1 PRJNA224116 SAMN02471941 ASHS00000000.1 na 1331008 1280 Staphylococcus aureus subsp. aureus CBD-635 strain=CBD-635 na latest Contig Major Full 2013-05-29 CBD-635 University of South Florida GCA_000403115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/115/GCF_000403115.1_CBD-635/ na na na haploid bacteria 2818679 2818679 32.500000 0 86 86 NCBI RefSeq GCF_000403115.1-RS_2025_09_21 2025-09-21 2851 2702 64 23846279 GCF_000403135.1 PRJNA224116 SAMN02469442 AQPN00000000.1 reference genome 1150600 1288027 Arcticibacter svalbardensis MN12-7 strain=MN12-7 na latest Contig Major Full 2013-05-29 ArSv1 Centre for Cellular and Molecular Biology GCA_000403135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/135/GCF_000403135.1_ArSv1/ na assembly from type material na haploid bacteria 4687695 4687695 38.000000 0 149 149 NCBI RefSeq GCF_000403135.1-RS_2025_11_21 2025-11-21 4197 4092 48 23846277 GCF_000403155.2 PRJNA224116 SAMN01730983 ASSM00000000.1 na 1235785 818 Bacteroides thetaiotaomicron dnLKV9 strain=dnLKV9 na latest Scaffold Major Full 2013-06-14 Bact_thet_dnLKV9_V1 Broad Institute GCA_000403155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/155/GCF_000403155.2_Bact_thet_dnLKV9_V1/ na na na haploid bacteria 6232883 6217351 43.000000 0 6 20 NCBI RefSeq GCF_000403155.2-RS_2025_12_19 2025-12-19 4775 4614 83 na GCF_000403175.1 PRJNA224116 SAMN01730985 ASSO00000000.1 na 1235787 820 Bacteroides uniformis dnLKV2 strain=dnLKV2 na latest Scaffold Major Full 2013-06-14 Bact_unif_dnLKV2_V1 Broad Institute GCA_000403175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/175/GCF_000403175.1_Bact_unif_dnLKV2_V1/ na na na haploid bacteria 4835507 4820482 46.500000 0 11 17 NCBI RefSeq GCF_000403175.1-RS_2025_12_25 2025-12-25 3984 3824 78 na GCF_000403355.2 PRJNA224116 SAMN01730995 ASSY00000000.1 reference genome 1235794 671266 Adlercreutzia caecimuris B7 strain=B7 na latest Scaffold Major Full 2013-06-14 Ente_caec_B7_V1 Broad Institute GCA_000403355.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/355/GCF_000403355.2_Ente_caec_B7_V1/ na assembly from type material na haploid bacteria 2955616 2943296 64.000000 0 6 17 NCBI RefSeq GCF_000403355.2-RS_2026_04_26 2026-04-26 2519 2447 60 na GCF_000403375.2 PRJNA224116 SAMN01730996 ASSZ00000000.1 reference genome 1235795 343517 Paenibacillus barengoltzii G22 strain=G22 na latest Scaffold Major Full 2013-06-14 Paen_bare_G22_V1 Broad Institute GCA_000403375.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/375/GCF_000403375.2_Paen_bare_G22_V1/ na na na haploid bacteria 4781233 4749952 52.000000 0 5 40 NCBI RefSeq GCF_000403375.2-RS_2026_04_23 2026-04-23 4373 4236 93 na GCF_000403395.2 PRJNA224116 SAMN01730997 ASTA00000000.1 na 1235835 1235835 Anaerotruncus sp. G3(2012) strain=G3 na latest Scaffold Major Full 2013-06-14 Anae_bact_G3_V1 Broad Institute GCA_000403395.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/395/GCF_000403395.2_Anae_bact_G3_V1/ na na na haploid bacteria 3620383 3513927 54.500000 0 24 139 NCBI RefSeq GCF_000403395.2-RS_2024_08_13 2024-08-13 3509 3333 70 na GCF_000403435.2 PRJNA224116 SAMN01730999 ASTC00000000.1 na 1235797 1235797 Oscillibacter sp. 1-3 strain=1-3 na latest Scaffold Major Full 2013-06-14 Osci_bact_1-3_V1 Broad Institute GCA_000403435.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/435/GCF_000403435.2_Osci_bact_1-3_V1/ na na na haploid bacteria 4467686 4430205 58.500000 0 12 43 NCBI RefSeq GCF_000403435.2-RS_2024_08_22 2024-08-22 4489 4331 62 na GCF_000403515.1 PRJNA264001 SAMD00002584 BAOW00000000.1 reference genome 1305764 327079 Pseudozyma hubeiensis SY62 strain=SY62 na latest Scaffold Major Full 2013-05-16 ASM40351v1 Kitami Institute of Technology GCA_000403515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/515/GCF_000403515.1_ASM40351v1/ na na na haploid fungi 18442938 18435583 56.500000 0 74 160 NCBI RefSeq Annotation submitted by NCBI RefSeq 2015-04-20 7619 7472 147 23814110 GCF_000403555.2 PRJNA224116 SAMN02469927 na na 1281284 339 Xanthomonas campestris pv. campestris str. CN16 strain=CN16 na latest Chromosome Major Full 2017-11-16 ASM40355v2 CNRS GCA_000403555.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/555/GCF_000403555.2_ASM40355v2/ na na na haploid bacteria 5162366 5162366 65.000000 2 13 13 NCBI RefSeq GCF_000403555.2-RS_2026_06_01 2026-06-01 4570 4224 141 na GCF_000403575.2 PRJNA224116 SAMN02469928 na na 1281283 339 Xanthomonas campestris pv. campestris str. CN15 strain=CN15 na latest Complete Genome Major Full 2017-11-16 ASM40357v2 CNRS GCA_000403575.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/575/GCF_000403575.2_ASM40357v2/ na na na haploid bacteria 5114892 5114892 65.000000 3 3 3 NCBI RefSeq GCF_000403575.2-RS_2026_06_01 2026-06-01 4506 4192 141 na GCF_000403645.1 PRJNA224116 SAMN02602994 na na 1333523 1333523 Salinarchaeum sp. Harcht-Bsk1 strain=Harcht-Bsk1 na latest Complete Genome Major Full 2013-05-30 ASM40364v1 Baltic Federal University GCA_000403645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/645/GCF_000403645.1_ASM40364v1/ na na na haploid archaea 3255260 3255260 66.500000 1 1 1 NCBI RefSeq GCF_000403645.1-RS_2024_10_21 2024-10-21 3122 3049 52 23868130 GCF_000403665.1 PRJNA224116 SAMN02469606 APVM00000000.1 na 1200984 1916 Streptomyces lividans 1326 strain=1326 na latest Chromosome Major Full 2013-06-04 Streptomyces lividans 1326 CINVESTAV GCA_000403665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/665/GCF_000403665.1_Streptomyces_lividans_1326/ na na na haploid bacteria 8496762 8409936 72.000000 1 1 85 NCBI RefSeq GCF_000403665.1-RS_2025_03_10 2025-03-10 7754 7326 76 23709624 GCF_000403685.1 PRJNA224116 SAMEA2272764 CAWB000000000.1 na 1288493 1280 Staphylococcus aureus subsp. aureus S1800 strain=S1800 na latest Contig Major Full 2013-05-30 S1800D1 UMCU GCA_000403685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/685/GCF_000403685.1_S1800D1/ na na na haploid bacteria 2738393 2738393 33.000000 0 401 401 NCBI RefSeq GCF_000403685.1-RS_2026_03_09 2026-03-09 2739 2643 9 na GCF_000403705.1 PRJNA224116 SAMEA2272412 CBKS000000000.1 na 1324608 633 Yersinia pseudotuberculosis B-7194 strain=B-7194 na latest Contig Major Full 2013-05-28 B-7194 UPSUD GCA_000403705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/705/GCF_000403705.1_B-7194/ na na na haploid bacteria 4427121 4427121 47.500000 0 240 240 NCBI RefSeq GCF_000403705.1-RS_2026_01_30 2026-01-30 3921 3750 52 23868131 GCF_000403725.2 PRJNA224116 SAMEA2272017 CAVS000000000.2 na 1232427 1232427 Corynebacterium ihumii strain=GD7 na latest Scaffold Major Full 2013-05-29 GD7 Unite de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE) CNRS, Faculte de Medecine, Universite de la Mediterranee, Marseille, France GCA_000403725.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/725/GCF_000403725.2_GD7/ na assembly from type material na haploid bacteria 2259786 2240769 65.000000 0 14 50 NCBI RefSeq GCF_000403725.2-RS_2026_03_31 2026-03-31 2203 2100 62 na GCF_000403745.1 PRJNA224116 SAMEA2272156 CBKR000000000.1 na 1324587 633 Yersinia pseudotuberculosis B-7195 strain=B-7195 na latest Contig Major Full 2013-05-28 B-7195 UPSUD GCA_000403745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/745/GCF_000403745.1_B-7195/ na na na haploid bacteria 4608472 4608472 47.500000 0 261 261 NCBI RefSeq GCF_000403745.1-RS_2026_01_30 2026-01-30 4126 3959 58 23868131 GCF_000403765.2 PRJNA224116 SAMN02471960 AROY00000000.2 na 1316445 1971 Streptomyces noursei CCRC 11814 strain=CCRC 11814 na latest Contig Major Full 2013-08-02 SAlb2 University of the Witwatersrand GCA_000403765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/765/GCF_000403765.2_SAlb2/ na na na haploid bacteria 9304371 9304371 72.000000 0 242 242 NCBI RefSeq GCF_000403765.2-RS_2025_08_12 2025-08-12 8281 8013 74 24009124 GCF_000403785.1 PRJNA224116 SAMN02471749 APHJ00000000.1 na 985255 985255 Gillisia sp. CAL575 strain=CAL575 na latest Contig Major Full 2013-05-31 ASM40378v1 University of Florence GCA_000403785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/785/GCF_000403785.1_ASM40378v1/ na na na haploid bacteria 3646721 3646721 34.000000 0 54 54 NCBI RefSeq GCF_000403785.1-RS_2025_01_08 2025-01-08 3266 3193 44 na GCF_000403825.2 PRJNA224116 SAMN01730987 ASSQ00000000.1 na 1235789 328812 Parabacteroides goldsteinii dnLKV18 strain=dnLKV18 na latest Scaffold Major Full 2013-06-14 Para_gold_dnLKV18_V1 Broad Institute GCA_000403825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/825/GCF_000403825.2_Para_gold_dnLKV18_V1/ na na na haploid bacteria 7086746 7066206 43.500000 0 14 33 NCBI RefSeq GCF_000403825.2-RS_2025_12_05 2025-12-05 5634 5429 108 na GCF_000403845.2 PRJNA224116 SAMN01730989 ASSS00000000.1 na 1235790 1235790 Eubacterium sp. 14-2 strain=14-2 na latest Scaffold Major Full 2013-06-14 Euba_bact_14-2_V1 Broad Institute GCA_000403845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/845/GCF_000403845.2_Euba_bact_14-2_V1/ na na na haploid bacteria 3996868 3980063 45.000000 0 4 19 NCBI RefSeq GCF_000403845.2-RS_2024_08_22 2024-08-22 3883 3753 67 na GCF_000403965.1 PRJNA224116 SAMN02470152 AOUQ00000000.1 na 1055539 562 Escherichia coli O91 strain=O91 na latest Contig Major Full 2013-05-31 ASM40396v1 Korea National Institute of Health, Korea Centers for Disease Control & Prevention GCA_000403965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/965/GCF_000403965.1_ASM40396v1/ na na na haploid bacteria 5069316 5069316 50.500000 0 439 439 NCBI RefSeq GCF_000403965.1-RS_2025_06_14 2025-06-14 5142 4796 33 na GCF_000403985.1 PRJNA224116 SAMN02470151 AOUP00000000.1 na 1055539 562 Escherichia coli O91 strain=O91 na latest Contig Major Full 2013-05-31 ASM40398v1 Korea National Institute of Health, Korea Centers for Disease Control & Prevention GCA_000403985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/403/985/GCF_000403985.1_ASM40398v1/ na na na haploid bacteria 4979444 4979444 50.500000 0 900 900 NCBI RefSeq GCF_000403985.1-RS_2025_06_14 2025-06-14 5251 4861 18 na GCF_000404005.1 PRJNA224116 SAMN02470037 APIV00000000.1 na 579932 579932 Streptomyces sp. FXJ7.023 strain=FXJ7.023 na latest Contig Major Full 2013-05-31 Streptomyces sp. FXJ7.023 state Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences GCA_000404005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/005/GCF_000404005.1_Streptomyces_sp._FXJ7.023/ na na na haploid bacteria 8215649 8215649 72.500000 0 84 84 NCBI RefSeq GCF_000404005.1-RS_2025_03_25 2025-03-25 7260 6753 72 na GCF_000404025.1 PRJNA224116 SAMN02469949 APGP00000000.1 na 1214564 1214564 Caldicellulosiruptor sp. F32 strain=F32 na latest Contig Major Full 2013-05-31 f32_1 Institute of Bioenergy and Bioprocess Technology, CAS GCA_000404025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/025/GCF_000404025.1_f32_1/ na na na haploid bacteria 2378643 2378643 35.000000 0 127 127 NCBI RefSeq GCF_000404025.1-RS_2025_08_25 2025-08-25 2467 2287 49 25576604 GCF_000404045.1 PRJNA224116 SAMN02471304 APHV00000000.1 na 1262469 192 Azospirillum brasilense FP2 strain=FP2 na latest Contig Major Full 2013-05-31 ASM40404v1 Universidade Federal do Parana GCA_000404045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/045/GCF_000404045.1_ASM40404v1/ na na na haploid bacteria 6885108 6885108 68.000000 0 413 413 NCBI RefSeq GCF_000404045.1-RS_2026_05_13 2026-05-13 6947 6435 73 na GCF_000404125.1 PRJNA224116 SAMN01939134 APJK00000000.1 na 1044999 65700 Erwinia tracheiphila PSU-1 strain=PSU-1 na latest Scaffold Major Full 2013-06-04 Version 1 Erwinia tracheiphila PSU-1 USDA-ARS-Pacific Basin Agricultural Research Center GCA_000404125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/125/GCF_000404125.1_Version_1_Erwinia_tracheiphila_PSU-1/ na na na haploid bacteria 4717274 4233404 50.000000 0 27 332 NCBI RefSeq GCF_000404125.1-RS_2026_02_15 2026-02-15 4452 3663 59 na GCF_000404145.1 PRJNA224116 SAMN02603963 na na 1232381 1718 Corynebacterium glutamicum SCgG1 strain=SCgG1 na latest Complete Genome Major Full 2013-06-03 ASM40414v1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences GCA_000404145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/145/GCF_000404145.1_ASM40414v1/ na na na haploid bacteria 3350620 3350620 54.000000 1 1 1 NCBI RefSeq GCF_000404145.1-RS_2026_01_30 2026-01-30 3114 2996 80 na GCF_000404165.1 PRJNA224116 SAMN02602974 na na 224719 224719 Methanobrevibacter sp. AbM4 strain=AbM4 na latest Complete Genome Major Full 2013-06-03 ASM40416v1 AgResearch Ltd. & The New Zealand Agricultural Greenhouse Gas Research Centre GCA_000404165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/165/GCF_000404165.1_ASM40416v1/ na na na haploid archaea 1998189 1998189 29.000000 1 1 1 NCBI RefSeq GCF_000404165.1-RS_2024_10_21 2024-10-21 1751 1691 47 na GCF_000404185.1 PRJNA224116 SAMN02603964 na na 1232383 1718 Corynebacterium glutamicum SCgG2 strain=SCgG2 na latest Complete Genome Major Full 2013-06-03 ASM40418v1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences GCA_000404185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/185/GCF_000404185.1_ASM40418v1/ na na na haploid bacteria 3350619 3350619 54.000000 1 1 1 NCBI RefSeq GCF_000404185.1-RS_2026_01_30 2026-01-30 3110 2991 80 na GCF_000404205.1 PRJNA224116 SAMN05771124 na na 1313290 1648 Erysipelothrix rhusiopathiae SY1027 strain=SY1027 na latest Complete Genome Major Full 2013-06-03 ASM40420v1 Nanjing Agricultural University Bioinformatics Center GCA_000404205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/205/GCF_000404205.1_ASM40420v1/ na na na haploid bacteria 1752910 1752910 36.500000 1 1 1 NCBI RefSeq GCF_000404205.1-RS_2025_07_06 2025-07-06 1859 1728 67 24993343 GCF_000404225.1 PRJNA224116 SAMN03081468 na na 1295009 1406512 Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 strain=Issoire-Mx1 na latest Complete Genome Major Full 2013-06-03 ASM40422v1 Universite d'Auvergne GCA_000404225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/225/GCF_000404225.1_ASM40422v1/ na na na haploid archaea 1931651 1931651 41.500000 1 1 1 NCBI RefSeq GCF_000404225.1-RS_2025_12_05 2025-12-05 1903 1837 52 23846268 GCF_000404245.1 PRJNA224116 SAMN02603729 na na 1199191 446 Legionella pneumophila subsp. pneumophila str. Thunder Bay strain=Thunder Bay na latest Complete Genome Major Full 2013-06-03 ASM40424v1 Public Health Ontario GCA_000404245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/404/245/GCF_000404245.1_ASM40424v1/ na na na haploid bacteria 3455167 3455167 38.000000 1 1 1 NCBI RefSeq GCF_000404245.1-RS_2026_04_30 2026-04-30 3122 3039 46 23826259 GCF_000406045.1 PRJNA224116 SAMN02470093 AONY00000000.1 na 1240404 1240404 Dickeya oryzae strain=CSL RW192 na latest Chromosome Major Full 2013-06-20 DZERW192_1.0 James Hutton Institute GCA_000406045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/045/GCF_000406045.1_DZERW192_1.0/ na na na haploid bacteria 4701772 4696572 53.500000 1 4 56 NCBI RefSeq GCF_000406045.1-RS_2026_03_31 2026-03-31 4257 4118 74 24265502 GCF_000406065.1 PRJNA224116 SAMN02470085 AOOC00000000.1 na 1223571 556 Dickeya chrysanthemi pv. parthenii NCPPB 516 strain=NCPPB 516 na latest Chromosome Major Full 2013-06-05 DCH516_1.0 James Hutton Institute GCA_000406065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/065/GCF_000406065.1_DCH516_1.0/ na na na haploid bacteria 4617243 4614643 54.000000 1 8 34 NCBI RefSeq GCF_000406065.1-RS_2026_02_08 2026-02-08 4238 4051 87 24265502 GCF_000406085.2 PRJNA224116 SAMN02470084 AONZ00000000.2 na 1224144 1224144 Dickeya sp. CSL RW240 strain=CSL RW240 na latest Chromosome Major Full 2016-01-28 ASM40608v2 James Hutton Institute GCA_000406085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/085/GCF_000406085.2_ASM40608v2/ na na na haploid bacteria 4386617 4380917 53.500000 1 26 83 NCBI RefSeq GCF_000406085.2-RS_2024_08_23 2024-08-23 3972 3803 74 24265502 GCF_000406105.1 PRJNA224116 SAMN02470094 AOOA00000000.1 na 1223569 556 Dickeya chrysanthemi NCPPB 402 strain=NCPPB 402 na latest Chromosome Major Full 2013-06-20 DCH402_1.0 James Hutton Institute GCA_000406105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/105/GCF_000406105.1_DCH402_1.0/ na assembly from type material na haploid bacteria 4700353 4694753 54.000000 1 21 77 NCBI RefSeq GCF_000406105.1-RS_2026_01_15 2026-01-15 4289 4069 71 24265502 GCF_000406125.1 PRJNA224116 SAMN02470100 AOOD00000000.1 na 568768 568768 Dickeya poaceiphila strain=NCPPB 569 na latest Chromosome Major Full 2013-06-20 DXY569_1.0 James Hutton Institute GCA_000406125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/125/GCF_000406125.1_DXY569_1.0/ na assembly from type material na haploid bacteria 4220760 4215060 52.500000 1 6 63 NCBI RefSeq GCF_000406125.1-RS_2026_02_02 2026-02-02 3873 3586 86 24265502 GCF_000406145.1 PRJNA224116 SAMN02470086 AOOE00000000.1 na 1223572 204038 Dickeya dadantii NCPPB 898 strain=NCPPB 898 na latest Chromosome Major Full 2013-06-20 DDA898_1.0 James Hutton Institute GCA_000406145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/145/GCF_000406145.1_DDA898_1.0/ na assembly from type material na haploid bacteria 4937637 4933637 56.500000 1 12 52 NCBI RefSeq GCF_000406145.1-RS_2025_08_04 2025-08-04 4456 4273 75 24265502 GCF_000406165.1 PRJNA224116 SAMN02470089 AOOF00000000.1 na 1223573 204042 Dickeya zeae NCPPB 2538 strain=NCPPB 2538 na latest Chromosome Major Full 2013-06-20 DZE2538_1.0 James Hutton Institute GCA_000406165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/165/GCF_000406165.1_DZE2538_1.0/ na assembly from type material na haploid bacteria 4563790 4559890 53.500000 1 7 46 NCBI RefSeq GCF_000406165.1-RS_2026_02_02 2026-02-02 4088 3943 76 24265502 GCF_000406185.1 PRJNA224116 SAMN02470106 AOOG00000000.1 na 1223574 204038 Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 strain=NCPPB 2976 na latest Chromosome Major Full 2013-06-20 DDA2976_1.0 James Hutton Institute GCA_000406185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/185/GCF_000406185.1_DDA2976_1.0/ na assembly from type material na haploid bacteria 4817532 4810532 56.500000 1 14 84 NCBI RefSeq GCF_000406185.1-RS_2026_02_02 2026-02-02 4384 4190 73 24265502 GCF_000406205.1 PRJNA224116 SAMN02470096 AOOH00000000.1 na 568766 568766 Dickeya sp. NCPPB 3274 strain=NCPPB 3274 na latest Chromosome Major Full 2013-06-20 DXX3274_1.0 James Hutton Institute GCA_000406205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/205/GCF_000406205.1_DXX3274_1.0/ na na na haploid bacteria 5115016 5110316 56.500000 1 15 62 NCBI RefSeq GCF_000406205.1-RS_2024_08_22 2024-08-22 4557 4373 84 24265502 GCF_000406225.1 PRJNA224116 SAMN02470101 AOOI00000000.1 na 1224146 204042 Dickeya zeae NCPPB 3531 strain=NCPPB 3531 na latest Chromosome Major Full 2013-06-20 DZE3531_1.0 James Hutton Institute GCA_000406225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/225/GCF_000406225.1_DZE3531_1.0/ na na na haploid bacteria 4625858 4623158 53.500000 1 2 29 NCBI RefSeq GCF_000406225.1-RS_2025_04_26 2025-04-26 4109 3994 74 24265502 GCF_000406245.1 PRJNA224116 SAMN02470090 AOOJ00000000.1 na 1224148 556 Dickeya chrysanthemi NCPPB 3533 strain=NCPPB 3533 na latest Chromosome Major Full 2013-06-20 DCH3533_1.0 James Hutton Institute GCA_000406245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/245/GCF_000406245.1_DCH3533_1.0/ na na na haploid bacteria 4730712 4723912 54.500000 1 23 91 NCBI RefSeq GCF_000406245.1-RS_2026_03_28 2026-03-28 4290 4128 79 24265502 GCF_000406265.1 PRJNA224116 SAMN02470102 AOOL00000000.1 na 1224149 204038 Dickeya dadantii NCPPB 3537 strain=NCPPB 3537 na latest Chromosome Major Full 2013-06-20 DDA3537_1.0 James Hutton Institute GCA_000406265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/265/GCF_000406265.1_DDA3537_1.0/ na na na haploid bacteria 4808448 4805048 56.500000 1 12 46 NCBI RefSeq GCF_000406265.1-RS_2025_08_06 2025-08-06 4282 4127 80 24265502 GCF_000406285.1 PRJNA224116 SAMN02470098 AOON00000000.1 na 1225785 1225785 Dickeya sp. DW 0440 strain=DW 0440 na latest Chromosome Major Full 2013-06-20 DXXDW0440_1.0 James Hutton Institute GCA_000406285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/285/GCF_000406285.1_DXXDW0440_1.0/ na na na haploid bacteria 4341937 4326037 53.500000 1 47 206 NCBI RefSeq GCF_000406285.1-RS_2024_07_31 2024-07-31 3968 3774 64 24265502 GCF_000406305.1 PRJNA224116 SAMN02470104 AOOO00000000.1 na 1224145 1224145 Dickeya sp. MK7 strain=MK7 na latest Chromosome Major Full 2013-06-20 DXXMK7_1.0 James Hutton Institute GCA_000406305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/305/GCF_000406305.1_DXXMK7_1.0/ na na na haploid bacteria 4931396 4926896 56.500000 1 21 66 NCBI RefSeq GCF_000406305.1-RS_2024_08_22 2024-08-22 4380 4248 74 24265502 GCF_000406325.1 PRJNA224116 SAMN02470105 AOOR00000000.1 na 1224153 204042 Dickeya zeae MK19 strain=MK19 na latest Chromosome Major Full 2013-06-20 DZEMK19_1.0 James Hutton Institute GCA_000406325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/325/GCF_000406325.1_DZEMK19_1.0/ na na na haploid bacteria 4672151 4669051 53.500000 1 4 35 NCBI RefSeq GCF_000406325.1-RS_2026_03_28 2026-03-28 4209 4088 78 24265502 GCF_000406345.2 PRJNA224116 SAMN02178496 ASRG00000000.2 na 1334627 2107999 Lactobacillus paragasseri K7 strain=K7 na latest Scaffold Major Full 2014-06-12 LK71.0 Institute of Dairy Science and Probiotics, Department of Animal Science, Biotechnical Faculty, University of Ljubljana GCA_000406345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/345/GCF_000406345.2_LK71.0/ na na na haploid bacteria 1994163 1993970 35.000000 0 8 13 NCBI RefSeq GCF_000406345.2-RS_2026_02_06 2026-02-06 2003 1863 68 25059871 GCF_000406385.1 PRJNA224116 SAMN02141983 AQQD00000000.1 na 1284833 573 Klebsiella pneumoniae KP-7 strain=KP-7 na latest Contig Major Full 2013-06-04 gkp47v01 JCVI GCA_000406385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/385/GCF_000406385.1_gkp47v01/ na na na haploid bacteria 5672685 5672685 57.000000 0 321 321 NCBI RefSeq GCF_000406385.1-RS_2025_03_23 2025-03-23 5797 5559 64 24913165 GCF_000406405.1 PRJNA224116 SAMN02142015 AQOT00000000.1 na 1284787 573 Klebsiella pneumoniae UHKPC40 strain=UHKPC40 na latest Contig Major Full 2013-06-04 gkp1v01 JCVI GCA_000406405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/405/GCF_000406405.1_gkp1v01/ na na na haploid bacteria 5490156 5490156 57.000000 0 155 155 NCBI RefSeq GCF_000406405.1-RS_2025_01_05 2025-01-05 5512 5358 56 24913165 GCF_000406425.1 PRJNA224116 SAMN02141973 APVO00000000.1 na 1284810 573 Klebsiella pneumoniae UHKPC09 strain=UHKPC09 na latest Contig Major Full 2013-06-04 gkp24v01 JCVI GCA_000406425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/425/GCF_000406425.1_gkp24v01/ na na na haploid bacteria 5501391 5501391 57.000000 0 205 205 NCBI RefSeq GCF_000406425.1-RS_2025_01_05 2025-01-05 5572 5385 59 24913165 GCF_000406445.1 PRJNA224116 SAMN02141984 APVP00000000.1 na 1284811 573 Klebsiella pneumoniae UHKPC01 strain=UHKPC01 na latest Contig Major Full 2013-06-04 gkp25v01 JCVI GCA_000406445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/445/GCF_000406445.1_gkp25v01/ na na na haploid bacteria 5575547 5575547 57.000000 0 223 223 NCBI RefSeq GCF_000406445.1-RS_2025_01_05 2025-01-05 5651 5451 58 24913165 GCF_000406465.1 PRJNA224116 SAMN02141968 APVR00000000.1 na 1284813 573 Klebsiella pneumoniae UHKPC27 strain=UHKPC27 na latest Contig Major Full 2013-06-04 gkp27v01 JCVI GCA_000406465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/465/GCF_000406465.1_gkp27v01/ na na na haploid bacteria 5571683 5571683 57.000000 0 220 220 NCBI RefSeq GCF_000406465.1-RS_2025_01_05 2025-01-05 5646 5446 60 24913165 GCF_000406485.1 PRJNA224116 SAMN02141991 APWF00000000.1 na 1304920 573 Klebsiella pneumoniae 361_1301 strain=361_1301 na latest Contig Major Full 2013-06-04 gkp53v01 JCVI GCA_000406485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/485/GCF_000406485.1_gkp53v01/ na na na haploid bacteria 5389421 5389421 57.500000 0 148 148 NCBI RefSeq GCF_000406485.1-RS_2025_01_05 2025-01-05 5410 5254 55 24913165 GCF_000406505.1 PRJNA224116 SAMN02141966 APWE00000000.1 na 1284834 573 Klebsiella pneumoniae KP-11 strain=KP-11 na latest Contig Major Full 2013-06-04 gkp48v01 JCVI GCA_000406505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/505/GCF_000406505.1_gkp48v01/ na na na haploid bacteria 5718845 5718845 57.000000 0 301 301 NCBI RefSeq GCF_000406505.1-RS_2025_01_05 2025-01-05 5848 5594 63 24913165 GCF_000406525.1 PRJNA224116 SAMN02142028 APVQ00000000.1 na 1284812 573 Klebsiella pneumoniae UHKPC81 strain=UHKPC81 na latest Contig Major Full 2013-06-04 gkp26v01 JCVI GCA_000406525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/525/GCF_000406525.1_gkp26v01/ na na na haploid bacteria 5532328 5532328 57.000000 0 231 231 NCBI RefSeq GCF_000406525.1-RS_2025_01_05 2025-01-05 5456 5244 54 24913165 GCF_000406545.1 PRJNA224116 SAMN02142050 APWC00000000.1 na 1284831 573 Klebsiella pneumoniae VAKPC297 strain=VAKPC297 na latest Contig Major Full 2013-06-04 gkp45v01 JCVI GCA_000406545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/545/GCF_000406545.1_gkp45v01/ na na na haploid bacteria 5624526 5624526 57.000000 0 216 216 NCBI RefSeq GCF_000406545.1-RS_2025_03_23 2025-03-23 5664 5504 52 24913165 GCF_000406565.1 PRJNA224116 SAMN02142049 APVZ00000000.1 na 1284828 573 Klebsiella pneumoniae VAKPC280 strain=VAKPC280 na latest Contig Major Full 2013-06-04 gkp42v01 JCVI GCA_000406565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/565/GCF_000406565.1_gkp42v01/ na na na haploid bacteria 5366546 5366546 57.500000 0 164 164 NCBI RefSeq GCF_000406565.1-RS_2025_01_05 2025-01-05 5408 5236 60 24913165 GCF_000406585.1 PRJNA224116 SAMN02142044 APWA00000000.1 na 1284829 573 Klebsiella pneumoniae VAKPC270 strain=VAKPC270 na latest Contig Major Full 2013-06-04 gkp43v01 JCVI GCA_000406585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/585/GCF_000406585.1_gkp43v01/ na na na haploid bacteria 5472934 5472934 57.000000 0 200 200 NCBI RefSeq GCF_000406585.1-RS_2025_01_05 2025-01-05 5562 5372 60 24913165 GCF_000406605.1 PRJNA224116 SAMN02141979 APVS00000000.1 na 1284815 573 Klebsiella pneumoniae UHKPC24 strain=UHKPC24 na latest Contig Major Full 2013-06-04 gkp29v01 JCVI GCA_000406605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/605/GCF_000406605.1_gkp29v01/ na na na haploid bacteria 5396453 5396453 57.500000 0 129 129 NCBI RefSeq GCF_000406605.1-RS_2025_01_05 2025-01-05 5414 5259 60 24913165 GCF_000406625.1 PRJNA224116 SAMN02142047 APWB00000000.1 na 1284830 573 Klebsiella pneumoniae VAKPC276 strain=VAKPC276 na latest Contig Major Full 2013-06-04 gkp44v01 JCVI GCA_000406625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/625/GCF_000406625.1_gkp44v01/ na na na haploid bacteria 5468994 5468994 57.000000 0 205 205 NCBI RefSeq GCF_000406625.1-RS_2025_01_05 2025-01-05 5547 5362 55 24913165 GCF_000406645.1 PRJNA224116 SAMN02142051 APWD00000000.1 na 1284832 573 Klebsiella pneumoniae VAKPC309 strain=VAKPC309 na latest Contig Major Full 2013-06-04 gkp46v01 JCVI GCA_000406645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/645/GCF_000406645.1_gkp46v01/ na na na haploid bacteria 5473881 5473881 57.000000 0 217 217 NCBI RefSeq GCF_000406645.1-RS_2025_01_05 2025-01-05 5564 5369 54 24913165 GCF_000406665.1 PRJNA224116 SAMN02141967 APVT00000000.1 na 1284816 573 Klebsiella pneumoniae UHKPC26 strain=UHKPC26 na latest Contig Major Full 2013-06-04 gkp30v01 JCVI GCA_000406665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/665/GCF_000406665.1_gkp30v01/ na na na haploid bacteria 5502788 5502788 57.000000 0 202 202 NCBI RefSeq GCF_000406665.1-RS_2025_01_05 2025-01-05 5579 5384 64 24913165 GCF_000406685.1 PRJNA224116 SAMN02141977 APVU00000000.1 na 1284820 573 Klebsiella pneumoniae UHKPC22 strain=UHKPC22 na latest Contig Major Full 2013-06-04 gkp34v01 JCVI GCA_000406685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/685/GCF_000406685.1_gkp34v01/ na na na haploid bacteria 5603708 5603708 57.000000 0 200 200 NCBI RefSeq GCF_000406685.1-RS_2025_01_05 2025-01-05 5644 5478 57 24913165 GCF_000406705.1 PRJNA224116 SAMN02141986 APVV00000000.1 na 1284823 573 Klebsiella pneumoniae UHKPC04 strain=UHKPC04 na latest Contig Major Full 2013-06-04 gkp37v01 JCVI GCA_000406705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/705/GCF_000406705.1_gkp37v01/ na na na haploid bacteria 5550266 5550266 57.000000 0 232 232 NCBI RefSeq GCF_000406705.1-RS_2025_01_05 2025-01-05 5648 5448 59 24913165 GCF_000406725.1 PRJNA224116 SAMN02142041 APVW00000000.1 na 1284824 573 Klebsiella pneumoniae VAKPC252 strain=VAKPC252 na latest Contig Major Full 2013-06-04 gkp38v01 JCVI GCA_000406725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/725/GCF_000406725.1_gkp38v01/ na na na haploid bacteria 5476814 5476814 57.000000 0 175 175 NCBI RefSeq GCF_000406725.1-RS_2025_09_17 2025-09-17 5512 5351 57 24913165 GCF_000406745.1 PRJNA224116 SAMN02141992 APWG00000000.1 na 1304921 573 Klebsiella pneumoniae 440_1540 strain=440_1540 na latest Contig Major Full 2013-06-04 gkp54v01 JCVI GCA_000406745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/745/GCF_000406745.1_gkp54v01/ na na na haploid bacteria 5488293 5488293 57.500000 0 213 213 NCBI RefSeq GCF_000406745.1-RS_2025_01_05 2025-01-05 5543 5362 41 24913165 GCF_000406765.2 PRJNA224116 SAMN02141993 na na 1304922 573 Klebsiella pneumoniae 500_1420 strain=500_1420 na latest Complete Genome Major Full 2015-07-23 ASM40676v2 JCVI GCA_000406765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/765/GCF_000406765.2_ASM40676v2/ na na na haploid bacteria 5547643 5547643 57.500000 5 5 5 NCBI RefSeq GCF_000406765.2-RS_2024_12_28 2024-12-28 5561 5302 124 24913165 GCF_000406825.1 PRJNA224116 SAMN02142042 APVX00000000.1 na 1284825 573 Klebsiella pneumoniae VAKPC254 strain=VAKPC254 na latest Contig Major Full 2013-06-04 gkp39v01 JCVI GCA_000406825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/825/GCF_000406825.1_gkp39v01/ na na na haploid bacteria 5531658 5531658 57.000000 0 175 175 NCBI RefSeq GCF_000406825.1-RS_2025_01_05 2025-01-05 5565 5403 58 24913165 GCF_000406845.1 PRJNA224116 SAMN02142043 APVY00000000.1 na 1284826 573 Klebsiella pneumoniae VAKPC269 strain=VAKPC269 na latest Contig Major Full 2013-06-04 gkp40v01 JCVI GCA_000406845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/845/GCF_000406845.1_gkp40v01/ na na na haploid bacteria 5354224 5354224 57.500000 0 155 155 NCBI RefSeq GCF_000406845.1-RS_2025_01_05 2025-01-05 5376 5213 53 24913165 GCF_000406865.1 PRJNA224116 SAMN02141994 APWI00000000.1 na 1304923 573 Klebsiella pneumoniae 540_1460 strain=540_1460 na latest Contig Major Full 2013-06-04 gkp56v01 JCVI GCA_000406865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/865/GCF_000406865.1_gkp56v01/ na na na haploid bacteria 5558834 5558834 57.000000 0 213 213 NCBI RefSeq GCF_000406865.1-RS_2025_01_05 2025-01-05 5625 5448 59 24913165 GCF_000406885.1 PRJNA224116 SAMN02141995 APWJ00000000.1 na 1304924 573 Klebsiella pneumoniae 646_1568 strain=646_1568 na latest Contig Major Full 2013-06-04 gkp57v01 JCVI GCA_000406885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/885/GCF_000406885.1_gkp57v01/ na na na haploid bacteria 5398867 5398867 57.500000 0 139 139 NCBI RefSeq GCF_000406885.1-RS_2025_01_05 2025-01-05 5425 5257 63 24913165 GCF_000406925.1 PRJNA224116 SAMN02596961 AHYW00000000.1 na 1121865 1355 Enterococcus columbae DSM 7374 = ATCC 51263 strain=ATCC 51263 na latest Scaffold Major Full 2013-06-04 Ente_colu_ATCC51263_V1 Broad Institute GCA_000406925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/925/GCF_000406925.1_Ente_colu_ATCC51263_V1/ na assembly from type material na haploid bacteria 2583038 2561372 36.500000 0 7 32 NCBI RefSeq GCF_000406925.1-RS_2026_05_16 2026-05-16 2427 2304 83 na GCF_000406945.1 PRJNA224116 SAMN02596962 AHYR00000000.1 reference genome 1139219 44009 Enterococcus dispar ATCC 51266 strain=ATCC 51266 na latest Scaffold Major Full 2013-06-04 Ente_disp_ATCC51266_V1 Broad Institute GCA_000406945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/945/GCF_000406945.1_Ente_disp_ATCC51266_V1/ na assembly from type material na haploid bacteria 2822228 2804237 37.000000 0 3 15 NCBI RefSeq GCF_000406945.1-RS_2026_03_31 2026-03-31 2715 2605 84 na GCF_000406965.1 PRJNA224116 SAMN02596897 AHYV00000000.1 na 1140002 33945 Enterococcus avium ATCC 14025 strain=ATCC 14025 na latest Scaffold Major Full 2013-06-04 Ente_aviu_ATCC14025_V1 Broad Institute GCA_000406965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/965/GCF_000406965.1_Ente_aviu_ATCC14025_V1/ na assembly from type material na haploid bacteria 4655405 4620500 39.000000 0 13 53 NCBI RefSeq GCF_000406965.1-RS_2026_05_16 2026-05-16 4601 4453 78 na GCF_000406985.1 PRJNA224116 SAMN02596963 AHYU00000000.1 na 1140001 53345 Enterococcus durans ATCC 6056 strain=ATCC 6056 na latest Scaffold Major Full 2013-06-04 Ente_dura_ATCC6056_V1 Broad Institute GCA_000406985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/406/985/GCF_000406985.1_Ente_dura_ATCC6056_V1/ na na na haploid bacteria 3153755 3090895 38.000000 0 19 71 NCBI RefSeq GCF_000406985.1-RS_2026_02_08 2026-02-08 3054 2804 60 na GCF_000407005.1 PRJNA224116 SAMN02596896 AHYT00000000.1 na 1139996 41997 Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 strain=ATCC 43076 na latest Scaffold Major Full 2013-06-04 Ente_sacc_ATCC43076_V1 Broad Institute GCA_000407005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/005/GCF_000407005.1_Ente_sacc_ATCC43076_V1/ na assembly from type material na haploid bacteria 2638500 2622550 37.000000 0 4 14 NCBI RefSeq GCF_000407005.1-RS_2026_05_16 2026-05-16 2670 2505 86 na GCF_000407025.1 PRJNA224116 SAMN02596964 AHYX00000000.1 na 1140003 1356 Enterococcus sulfureus ATCC 49903 strain=ATCC 49903 na latest Scaffold Major Full 2013-06-04 Ente_sulf_ATCC49903_V1 Broad Institute GCA_000407025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/025/GCF_000407025.1_Ente_sulf_ATCC49903_V1/ na assembly from type material na haploid bacteria 2306463 2295734 38.000000 0 9 21 NCBI RefSeq GCF_000407025.1-RS_2026_05_16 2026-05-16 2264 2173 81 na GCF_000407045.1 PRJNA224116 SAMN02596965 AHYN00000000.1 na 226185 1351 Enterococcus faecalis V583 strain=V583 na latest Scaffold Major Full 2013-06-04 Ente_faec_V583_V1 Broad Institute GCA_000407045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/045/GCF_000407045.1_Ente_faec_V583_V1/ na na na haploid bacteria 3329802 3312802 37.500000 0 9 26 NCBI RefSeq GCF_000407045.1-RS_2026_01_22 2026-01-22 3326 3183 73 na GCF_000407065.1 PRJNA224116 SAMN02596966 AHYO00000000.1 na 1138937 1352 Enterococcus faecium EnGen0375 strain=EnGen0375 na latest Scaffold Major Full 2013-06-04 Ente_faec_Efm_NY2-1_V1 Broad Institute GCA_000407065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/065/GCF_000407065.1_Ente_faec_Efm_NY2-1_V1/ na na na haploid bacteria 3120009 3074995 37.500000 0 16 67 NCBI RefSeq GCF_000407065.1-RS_2026_01_13 2026-01-13 3091 2837 109 na GCF_000407085.1 PRJNA224116 SAMN02596967 AHYP00000000.1 na 1138938 1352 Enterococcus faecium EnGen0376 strain=EnGen0376 na latest Scaffold Major Full 2013-06-04 Ente_faec_Efm_NY2-2_V1 Broad Institute GCA_000407085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/085/GCF_000407085.1_Ente_faec_Efm_NY2-2_V1/ na na na haploid bacteria 3127958 3053541 37.500000 0 25 82 NCBI RefSeq GCF_000407085.1-RS_2026_01_13 2026-01-13 3067 2841 81 na GCF_000407105.1 PRJNA224116 SAMN02596968 AHYQ00000000.1 na 1138939 1352 Enterococcus faecium EnGen0377 strain=EnGen0377 na latest Scaffold Major Full 2013-06-04 Ente_faec_Efm_NY2-3_V1 Broad Institute GCA_000407105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/105/GCF_000407105.1_Ente_faec_Efm_NY2-3_V1/ na na na haploid bacteria 3131004 3015320 37.500000 0 15 90 NCBI RefSeq GCF_000407105.1-RS_2026_01_13 2026-01-13 2996 2787 67 na GCF_000407125.1 PRJNA224116 SAMN02596969 AHYM00000000.1 na 420889 1363 Lactococcus garvieae ATCC 49156 strain=ATCC 49156 na latest Scaffold Major Full 2013-06-04 Lact_garv_ATCC49156_V1 Broad Institute GCA_000407125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/125/GCF_000407125.1_Lact_garv_ATCC49156_V1/ na assembly from heterotypic synonym type material na haploid bacteria 1950652 1942560 39.000000 0 5 16 NCBI RefSeq GCF_000407125.1-RS_2026_03_31 2026-03-31 1990 1867 81 na GCF_000407145.1 PRJNA224116 SAMN02596947 ASVV00000000.1 na 1158612 317735 Enterococcus caccae ATCC BAA-1240 strain=ATCC BAA-1240 na latest Scaffold Major Full 2013-06-04 Ente_cocc_BAA-1240_V2 Broad Institute GCA_000407145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/145/GCF_000407145.1_Ente_cocc_BAA-1240_V2/ na assembly from type material na haploid bacteria 3551907 3551822 36.000000 0 7 8 NCBI RefSeq GCF_000407145.1-RS_2026_05_16 2026-05-16 3321 3222 69 na GCF_000407165.1 PRJNA224116 SAMN02596950 ASVY00000000.1 na 1158608 155618 Enterococcus haemoperoxidus ATCC BAA-382 strain=ATCC BAA-382 na latest Scaffold Major Full 2013-06-04 Ente_haem_BAA-382_V2 Broad Institute GCA_000407165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/165/GCF_000407165.1_Ente_haem_BAA-382_V2/ na assembly from type material na haploid bacteria 3581919 3578766 35.500000 0 2 3 NCBI RefSeq GCF_000407165.1-RS_2026_04_23 2026-04-23 3272 3174 76 na GCF_000407185.1 PRJNA224116 SAMN02596952 ASWA00000000.1 na 1158601 71451 Enterococcus malodoratus ATCC 43197 strain=ATCC 43197 na latest Scaffold Major Full 2013-06-04 Ente_malo_ATCC43197_V2 Broad Institute GCA_000407185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/185/GCF_000407185.1_Ente_malo_ATCC43197_V2/ na assembly from type material na haploid bacteria 4627134 4626548 40.000000 0 6 7 NCBI RefSeq GCF_000407185.1-RS_2026_04_23 2026-04-23 4557 4431 90 na GCF_000407205.1 PRJNA224116 SAMN02596958 ASWG00000000.1 reference genome 1158604 112904 Enterococcus villorum ATCC 700913 strain=ATCC 700913 na latest Scaffold Major Full 2013-06-04 Ente_vill_ATCC700913_V2 Broad Institute GCA_000407205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/205/GCF_000407205.1_Ente_vill_ATCC700913_V2/ na assembly from heterotypic synonym type material na haploid bacteria 3060724 3056699 35.000000 0 4 5 NCBI RefSeq GCF_000407205.1-RS_2026_03_31 2026-03-31 2876 2687 86 na GCF_000407225.1 PRJNA224116 SAMN02596961 ASWJ00000000.1 reference genome 1121865 1355 Enterococcus columbae DSM 7374 = ATCC 51263 strain=ATCC 51263 na latest Scaffold Major Full 2013-06-04 Ente_colu_ATCC51263_V2 Broad Institute GCA_000407225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/225/GCF_000407225.1_Ente_colu_ATCC51263_V2/ na assembly from type material na haploid bacteria 2545099 2542704 36.500000 0 9 12 NCBI RefSeq GCF_000407225.1-RS_2026_05_02 2026-05-02 2390 2299 56 na GCF_000407245.1 PRJNA224116 SAMN02596897 ASWL00000000.1 na 1140002 33945 Enterococcus avium ATCC 14025 strain=ATCC 14025 na latest Scaffold Major Full 2013-06-04 Ente_aviu_ATCC14025_V2 Broad Institute GCA_000407245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/245/GCF_000407245.1_Ente_aviu_ATCC14025_V2/ na assembly from type material na haploid bacteria 4614282 4613601 39.000000 0 12 13 NCBI RefSeq GCF_000407245.1-RS_2026_01_15 2026-01-15 4578 4462 62 na GCF_000407265.1 PRJNA224116 SAMN02596963 ASWM00000000.1 na 1140001 53345 Enterococcus durans ATCC 6056 strain=ATCC 6056 na latest Scaffold Major Full 2013-06-04 Ente_dura_ATCC6056_V2 Broad Institute GCA_000407265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/265/GCF_000407265.1_Ente_dura_ATCC6056_V2/ na na na haploid bacteria 3170574 3170474 38.000000 0 10 11 NCBI RefSeq GCF_000407265.1-RS_2026_02_08 2026-02-08 3125 2880 63 na GCF_000407285.1 PRJNA224116 SAMN02596896 ASWN00000000.1 na 1139996 41997 Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 strain=ATCC 43076 na latest Scaffold Major Full 2013-06-04 Ente_sacc_ATCC43076_V2 Broad Institute GCA_000407285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/285/GCF_000407285.1_Ente_sacc_ATCC43076_V2/ na assembly from type material na haploid bacteria 2604038 2591178 37.000000 0 2 5 NCBI RefSeq GCF_000407285.1-RS_2026_05_02 2026-05-02 2637 2512 48 na GCF_000407305.1 PRJNA224116 SAMN02596965 ASWP00000000.1 na 226185 1351 Enterococcus faecalis V583 strain=V583 na latest Scaffold Major Full 2013-06-04 Ente_faec_V583_V2 Broad Institute GCA_000407305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/305/GCF_000407305.1_Ente_faec_V583_V2/ na na na haploid bacteria 3364308 3360944 37.500000 0 9 10 NCBI RefSeq GCF_000407305.1-RS_2026_01_22 2026-01-22 3364 3218 83 na GCF_000407325.1 PRJNA224116 SAMN02596967 ASWR00000000.1 na 1138938 1352 Enterococcus faecium EnGen0376 strain=EnGen0376 na latest Scaffold Major Full 2013-06-04 Ente_faec_Efm_NY2-2_V2 Broad Institute GCA_000407325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/325/GCF_000407325.1_Ente_faec_Efm_NY2-2_V2/ na na na haploid bacteria 3115293 3115193 37.500000 0 16 17 NCBI RefSeq GCF_000407325.1-RS_2026_01_13 2026-01-13 3091 2891 61 na GCF_000407345.1 PRJNA224116 SAMN02596968 ASWS00000000.1 na 1138939 1352 Enterococcus faecium EnGen0377 strain=EnGen0377 na latest Scaffold Major Full 2013-06-04 Ente_faec_Efm_NY2-3_V2 Broad Institute GCA_000407345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/345/GCF_000407345.1_Ente_faec_Efm_NY2-3_V2/ na na na haploid bacteria 3134378 3129789 37.500000 0 13 16 NCBI RefSeq GCF_000407345.1-RS_2026_01_13 2026-01-13 3122 2896 84 na GCF_000407365.1 PRJNA224116 SAMN02596946 ASVU00000000.1 reference genome 1158606 57732 Enterococcus asini ATCC 700915 strain=ATCC 700915 na latest Contig Major Full 2013-05-31 Ente_asin_ATCC700915_V2 Broad Institute GCA_000407365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/365/GCF_000407365.1_Ente_asin_ATCC700915_V2/ na assembly from type material na haploid bacteria 2572706 2572706 44.500000 0 2 2 NCBI RefSeq GCF_000407365.1-RS_2026_03_12 2026-03-12 2505 2388 90 na GCF_000407385.1 PRJNA224116 SAMN02596948 ASVW00000000.1 na 1158600 1352 Enterococcus faecium ATCC 8459 = NRRL B-2354 strain=ATCC 8459 na latest Contig Major Full 2013-05-31 Ente_faec_ATCC8459_V2 Broad Institute GCA_000407385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/385/GCF_000407385.1_Ente_faec_ATCC8459_V2/ na na na haploid bacteria 2820063 2820063 38.000000 0 10 10 NCBI RefSeq GCF_000407385.1-RS_2025_04_20 2025-04-20 2775 2586 90 na GCF_000407405.1 PRJNA224116 SAMN02596949 ASVX00000000.1 na 1158603 37734 Enterococcus casseliflavus ATCC 49996 strain=ATCC 49996 na latest Contig Major Full 2013-05-31 Ente_flav_ATCC49996_V2 Broad Institute GCA_000407405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/405/GCF_000407405.1_Ente_flav_ATCC49996_V2/ na assembly from heterotypic synonym type material na haploid bacteria 3592251 3592251 42.500000 0 9 9 NCBI RefSeq GCF_000407405.1-RS_2026_04_17 2026-04-17 3551 3401 81 na GCF_000407425.1 PRJNA224116 SAMN02596951 ASVZ00000000.1 na 768486 1354 Enterococcus hirae ATCC 9790 strain=ATCC 9790 na latest Contig Major Full 2013-05-31 Ente_hira_ATCC8043_V2 Broad Institute GCA_000407425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/425/GCF_000407425.1_Ente_hira_ATCC8043_V2/ na assembly from type material na haploid bacteria 2882665 2882665 37.000000 0 6 6 NCBI RefSeq GCF_000407425.1-RS_2026_05_16 2026-05-16 2753 2612 85 na GCF_000407445.1 PRJNA224116 SAMN02596953 ASWB00000000.1 na 1158609 155617 Enterococcus moraviensis ATCC BAA-383 strain=ATCC BAA-383 na latest Contig Major Full 2013-05-31 Ente_mora_BAA-383_V2 Broad Institute GCA_000407445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/445/GCF_000407445.1_Ente_mora_BAA-383_V2/ na assembly from type material na haploid bacteria 3586110 3586110 36.000000 0 6 6 NCBI RefSeq GCF_000407445.1-RS_2026_04_21 2026-04-21 3391 3301 73 na GCF_000407465.1 PRJNA224116 SAMN02596954 ASWC00000000.1 na 1158598 53346 Enterococcus mundtii ATCC 882 strain=ATCC 882 na latest Contig Major Full 2013-05-31 Ente_mund_ATCC882_V2 Broad Institute GCA_000407465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/465/GCF_000407465.1_Ente_mund_ATCC882_V2/ na na na haploid bacteria 3065585 3065585 38.500000 0 2 2 NCBI RefSeq GCF_000407465.1-RS_2026_01_30 2026-01-30 2961 2796 88 na GCF_000407485.1 PRJNA224116 SAMN02596955 ASWD00000000.1 na 1158607 160454 Enterococcus pallens ATCC BAA-351 strain=ATCC BAA-351 na latest Contig Major Full 2013-05-31 Ente_pall_BAA-351_V2 Broad Institute GCA_000407485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/485/GCF_000407485.1_Ente_pall_BAA-351_V2/ na assembly from type material na haploid bacteria 5437454 5437454 40.000000 0 13 13 NCBI RefSeq GCF_000407485.1-RS_2026_05_16 2026-05-16 5332 5190 96 na GCF_000407505.1 PRJNA224116 SAMN02596956 ASWE00000000.1 na 1158610 154621 Enterococcus phoeniculicola ATCC BAA-412 strain=ATCC BAA-412 na latest Contig Major Full 2013-05-31 Ente_phoe_BAA-412_V2 Broad Institute GCA_000407505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/505/GCF_000407505.1_Ente_phoe_BAA-412_V2/ na assembly from type material na haploid bacteria 3910972 3910972 36.500000 0 11 11 NCBI RefSeq GCF_000407505.1-RS_2026_05_16 2026-05-16 3581 3467 75 na GCF_000407525.1 PRJNA224116 SAMN02596957 ASWF00000000.1 na 1158602 71452 Enterococcus raffinosus ATCC 49464 strain=ATCC 49464 na latest Contig Major Full 2013-05-31 Ente_raff_ATCC49464_V2 Broad Institute GCA_000407525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/525/GCF_000407525.1_Ente_raff_ATCC49464_V2/ na na na haploid bacteria 4310366 4310366 39.500000 0 9 9 NCBI RefSeq GCF_000407525.1-RS_2026_02_08 2026-02-08 4306 4119 113 na GCF_000407545.1 PRJNA224116 SAMN02596959 ASWH00000000.1 na 1158614 160453 Enterococcus gilvus ATCC BAA-350 strain=ATCC BAA-350 na latest Contig Major Full 2013-05-31 Ente_gilf_BAA-350_PQ1_CCUG_45553_V2 Broad Institute GCA_000407545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/545/GCF_000407545.1_Ente_gilf_BAA-350_PQ1_CCUG_45553_V2/ na assembly from type material na haploid bacteria 4179913 4179913 41.500000 0 5 5 NCBI RefSeq GCF_000407545.1-RS_2026_04_23 2026-04-23 4226 4086 98 na GCF_000407565.1 PRJNA224116 SAMN02596960 ASWI00000000.1 na 1121864 44008 Enterococcus cecorum DSM 20682 = ATCC 43198 strain=ATCC 43198 na latest Contig Major Full 2013-05-31 Ente_ceco_ATCC43198_V1 Broad Institute GCA_000407565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/565/GCF_000407565.1_Ente_ceco_ATCC43198_V1/ na assembly from type material na haploid bacteria 2408477 2408477 36.500000 0 6 6 NCBI RefSeq GCF_000407565.1-RS_2025_12_23 2025-12-23 2458 2308 91 na GCF_000407585.1 PRJNA224116 SAMN02596962 ASWK00000000.1 na 1139219 44009 Enterococcus dispar ATCC 51266 strain=ATCC 51266 na latest Contig Major Full 2013-05-31 Ente_disp_ATCC51266_V2 Broad Institute GCA_000407585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/585/GCF_000407585.1_Ente_disp_ATCC51266_V2/ na assembly from type material na haploid bacteria 2812918 2812918 37.000000 0 4 4 NCBI RefSeq GCF_000407585.1-RS_2026_05_16 2026-05-16 2717 2603 87 na GCF_000407605.1 PRJNA224116 SAMN02596964 ASWO00000000.1 reference genome 1140003 1356 Enterococcus sulfureus ATCC 49903 strain=ATCC 49903 na latest Contig Major Full 2013-05-31 Ente_sulf_ATCC49903_V2 Broad Institute GCA_000407605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/605/GCF_000407605.1_Ente_sulf_ATCC49903_V2/ na assembly from type material na haploid bacteria 2301651 2301651 38.000000 0 8 8 NCBI RefSeq GCF_000407605.1-RS_2026_05_02 2026-05-02 2267 2166 94 na GCF_000407625.1 PRJNA224116 SAMN02596966 ASWQ00000000.1 na 1138937 1352 Enterococcus faecium EnGen0375 strain=EnGen0375 na latest Contig Major Full 2013-05-31 Ente_faec_Efm_NY2-1_V2 Broad Institute GCA_000407625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/625/GCF_000407625.1_Ente_faec_Efm_NY2-1_V2/ na na na haploid bacteria 3120317 3120317 37.500000 0 17 17 NCBI RefSeq GCF_000407625.1-RS_2026_01_13 2026-01-13 3092 2890 61 na GCF_000407645.1 PRJNA224116 SAMN02596969 ASWT00000000.1 na 420889 1363 Lactococcus garvieae ATCC 49156 strain=ATCC 49156 na latest Contig Major Full 2013-05-31 Lact_garv_ATCC49156_V2 Broad Institute GCA_000407645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/645/GCF_000407645.1_Lact_garv_ATCC49156_V2/ na assembly from heterotypic synonym type material na haploid bacteria 1932107 1932107 38.500000 0 6 6 NCBI RefSeq GCF_000407645.1-RS_2026_03_31 2026-03-31 1992 1870 76 na GCF_000407665.1 PRJNA224116 SAMN00847633 ASTN00000000.1 na 1169315 562 Escherichia coli KTE1 strain=KTE1 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE1_V1 Broad Institute GCA_000407665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/665/GCF_000407665.1_Esch_coli_KTE1_V1/ na na na haploid bacteria 5314802 5270977 51.000000 0 15 59 NCBI RefSeq GCF_000407665.1-RS_2025_06_14 2025-06-14 5188 4896 87 na GCF_000407685.1 PRJNA224116 SAMN00847634 ASTO00000000.1 na 1169316 562 Escherichia coli KTE3 strain=KTE3 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE3_V1 Broad Institute GCA_000407685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/685/GCF_000407685.1_Esch_coli_KTE3_V1/ na na na haploid bacteria 5171582 5124621 50.500000 0 8 58 NCBI RefSeq GCF_000407685.1-RS_2025_06_15 2025-06-15 5091 4762 93 na GCF_000407705.1 PRJNA224116 SAMN00847635 ASTP00000000.1 na 1169317 562 Escherichia coli KTE7 strain=KTE7 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE7_V1 Broad Institute GCA_000407705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/705/GCF_000407705.1_Esch_coli_KTE7_V1/ na na na haploid bacteria 5288552 5252518 50.500000 0 10 43 NCBI RefSeq GCF_000407705.1-RS_2025_06_14 2025-06-14 5278 4933 100 na GCF_000407725.1 PRJNA224116 SAMN00847636 ASTQ00000000.1 na 1169318 562 Escherichia coli KTE13 strain=KTE13 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE13_V1 Broad Institute GCA_000407725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/725/GCF_000407725.1_Esch_coli_KTE13_V1/ na na na haploid bacteria 5012540 4959688 51.000000 0 9 40 NCBI RefSeq GCF_000407725.1-RS_2025_06_14 2025-06-14 4847 4538 88 na GCF_000407745.1 PRJNA224116 SAMN00847638 ASTR00000000.1 na 1169320 562 Escherichia coli KTE35 strain=KTE35 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE35_V1 Broad Institute GCA_000407745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/745/GCF_000407745.1_Esch_coli_KTE35_V1/ na na na haploid bacteria 5123793 5062140 51.000000 0 18 87 NCBI RefSeq GCF_000407745.1-RS_2025_06_14 2025-06-14 5112 4680 115 na GCF_000407765.1 PRJNA224116 SAMN00847639 ASTS00000000.1 na 1169321 1169321 Escherichia sp. KTE114 strain=KTE114 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE114_V1 Broad Institute GCA_000407765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/765/GCF_000407765.1_Esch_coli_KTE114_V1/ na na na haploid bacteria 4754090 4693951 50.500000 0 12 37 NCBI RefSeq GCF_000407765.1-RS_2024_07_01 2024-07-01 4518 4303 97 na GCF_000407785.1 PRJNA224116 SAMN00847641 ASTT00000000.1 na 1169323 562 Escherichia coli KTE231 strain=KTE231 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE231_V1 Broad Institute GCA_000407785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/785/GCF_000407785.1_Esch_coli_KTE231_V1/ na na na haploid bacteria 5228966 5199931 50.500000 0 11 46 NCBI RefSeq GCF_000407785.1-RS_2025_06_14 2025-06-14 5101 4839 99 na GCF_000407805.1 PRJNA224116 SAMN00847651 ASTU00000000.1 na 1169333 562 Escherichia coli KTE14 strain=KTE14 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE14_V1 Broad Institute GCA_000407805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/805/GCF_000407805.1_Esch_coli_KTE14_V1/ na na na haploid bacteria 5414827 5286387 51.000000 0 27 92 NCBI RefSeq GCF_000407805.1-RS_2025_06_14 2025-06-14 5334 4947 109 na GCF_000407825.1 PRJNA224116 SAMN00847656 ASTV00000000.1 na 1169338 562 Escherichia coli KTE19 strain=KTE19 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE19_V1 Broad Institute GCA_000407825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/825/GCF_000407825.1_Esch_coli_KTE19_V1/ na na na haploid bacteria 5078540 5037301 50.500000 0 5 33 NCBI RefSeq GCF_000407825.1-RS_2025_06_14 2025-06-14 4891 4599 88 na GCF_000407845.1 PRJNA224116 SAMN00847657 ASTW00000000.1 na 1169339 562 Escherichia coli KTE20 strain=KTE20 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE20_V1 Broad Institute GCA_000407845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/845/GCF_000407845.1_Esch_coli_KTE20_V1/ na na na haploid bacteria 5636417 5573061 50.500000 0 24 72 NCBI RefSeq GCF_000407845.1-RS_2025_06_13 2025-06-13 5578 5204 104 na GCF_000407865.1 PRJNA224116 SAMN00847661 ASTX00000000.1 na 1169343 562 Escherichia coli KTE24 strain=KTE24 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE24_V1 Broad Institute GCA_000407865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/865/GCF_000407865.1_Esch_coli_KTE24_V1/ na na na haploid bacteria 5399340 5337291 50.500000 0 14 84 NCBI RefSeq GCF_000407865.1-RS_2025_06_14 2025-06-14 5358 4918 108 na GCF_000407885.1 PRJNA224116 SAMN00847664 ASTY00000000.1 na 1169346 562 Escherichia coli KTE27 strain=KTE27 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE27_V1 Broad Institute GCA_000407885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/885/GCF_000407885.1_Esch_coli_KTE27_V1/ na na na haploid bacteria 5180727 5111607 50.500000 0 7 46 NCBI RefSeq GCF_000407885.1-RS_2025_06_13 2025-06-13 5087 4744 96 na GCF_000407905.1 PRJNA224116 SAMN02596972 ASWW00000000.1 na 1331059 287 Pseudomonas aeruginosa MSH-10 strain=MSH-10 na latest Scaffold Major Full 2013-06-05 Pseu_aeru_MSH-10_V1 Broad Institute GCA_000407905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/905/GCF_000407905.1_Pseu_aeru_MSH-10_V1/ na na na haploid bacteria 6497439 6466492 66.500000 0 2 19 NCBI RefSeq GCF_000407905.1-RS_2025_02_20 2025-02-20 6048 5905 83 na GCF_000407925.1 PRJNA224116 SAMN00847667 ASTZ00000000.1 na 1169349 1169349 Escherichia sp. KTE31 strain=KTE31 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE31_V1 Broad Institute GCA_000407925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/925/GCF_000407925.1_Esch_coli_KTE31_V1/ na na na haploid bacteria 4556979 4514939 50.500000 0 9 29 NCBI RefSeq GCF_000407925.1-RS_2025_01_06 2025-01-06 4344 4150 101 na GCF_000407945.1 PRJNA224116 SAMN00847670 ASUA00000000.1 na 1169352 562 Escherichia coli KTE34 strain=KTE34 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE34_V1 Broad Institute GCA_000407945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/945/GCF_000407945.1_Esch_coli_KTE34_V1/ na na na haploid bacteria 5121978 5060331 51.000000 0 18 94 NCBI RefSeq GCF_000407945.1-RS_2025_06_13 2025-06-13 5120 4695 105 na GCF_000407965.1 PRJNA224116 SAMN00847671 ASUB00000000.1 na 1169353 562 Escherichia coli KTE36 strain=KTE36 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE36_V1 Broad Institute GCA_000407965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/965/GCF_000407965.1_Esch_coli_KTE36_V1/ na na na haploid bacteria 5318624 5269132 50.500000 0 18 48 NCBI RefSeq GCF_000407965.1-RS_2025_06_14 2025-06-14 5284 4932 99 na GCF_000407985.1 PRJNA224116 SAMN00847672 ASUC00000000.1 na 1169354 562 Escherichia coli KTE37 strain=KTE37 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE37_V1 Broad Institute GCA_000407985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/985/GCF_000407985.1_Esch_coli_KTE37_V1/ na na na haploid bacteria 5550382 5513241 50.500000 0 25 66 NCBI RefSeq GCF_000407985.1-RS_2025_06_13 2025-06-13 5611 5224 92 na GCF_000408005.1 PRJNA224116 SAMN00847673 ASUD00000000.1 na 1169355 562 Escherichia coli KTE38 strain=KTE38 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE38_V1 Broad Institute GCA_000408005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/005/GCF_000408005.1_Esch_coli_KTE38_V1/ na na na haploid bacteria 5639294 5491234 50.500000 0 27 144 NCBI RefSeq GCF_000408005.1-RS_2025_06_13 2025-06-13 5621 5227 100 na GCF_000408025.1 PRJNA224116 SAMN00847675 ASUE00000000.1 na 1169357 562 Escherichia coli KTE40 strain=KTE40 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE40_V1 Broad Institute GCA_000408025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/025/GCF_000408025.1_Esch_coli_KTE40_V1/ na na na haploid bacteria 5086485 5043541 51.000000 0 17 81 NCBI RefSeq GCF_000408025.1-RS_2025_06_13 2025-06-13 5071 4724 99 na GCF_000408045.1 PRJNA224116 SAMN00847676 ASUF00000000.1 na 1169358 562 Escherichia coli KTE41 strain=KTE41 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE41_V1 Broad Institute GCA_000408045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/045/GCF_000408045.1_Esch_coli_KTE41_V1/ na na na haploid bacteria 5009397 4961257 51.000000 0 9 91 NCBI RefSeq GCF_000408045.1-RS_2025_06_13 2025-06-13 4980 4594 110 na GCF_000408065.1 PRJNA224116 SAMN00974037 ASUG00000000.1 na 1181728 562 Escherichia coli KTE182 strain=KTE182 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE182_V1 Broad Institute GCA_000408065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/065/GCF_000408065.1_Esch_coli_KTE182_V1/ na na na haploid bacteria 5625543 5529264 50.500000 0 20 76 NCBI RefSeq GCF_000408065.1-RS_2025_06_13 2025-06-13 5513 5114 110 na GCF_000408085.1 PRJNA224116 SAMN00974040 ASUH00000000.1 na 1181731 562 Escherichia coli KTE185 strain=KTE185 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE185_V1 Broad Institute GCA_000408085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/085/GCF_000408085.1_Esch_coli_KTE185_V1/ na na na haploid bacteria 5273296 5214194 50.500000 0 11 55 NCBI RefSeq GCF_000408085.1-RS_2025_06_13 2025-06-13 5096 4762 93 na GCF_000408105.1 PRJNA224116 SAMN00974041 ASUI00000000.1 na 1181732 562 Escherichia coli KTE186 strain=KTE186 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE186_V1 Broad Institute GCA_000408105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/105/GCF_000408105.1_Esch_coli_KTE186_V1/ na na na haploid bacteria 5284082 5200940 50.500000 0 20 72 NCBI RefSeq GCF_000408105.1-RS_2025_06_13 2025-06-13 5302 4899 104 na GCF_000408125.1 PRJNA224116 SAMN00974050 ASUJ00000000.1 na 1181741 562 Escherichia coli KTE195 strain=KTE195 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE195_V1 Broad Institute GCA_000408125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/125/GCF_000408125.1_Esch_coli_KTE195_V1/ na na na haploid bacteria 5400667 5329783 50.500000 0 16 69 NCBI RefSeq GCF_000408125.1-RS_2025_06_13 2025-06-13 5206 4805 96 na GCF_000408145.1 PRJNA224116 SAMN00974053 ASUK00000000.1 na 1181744 562 Escherichia coli KTE198 strain=KTE198 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE198_V1 Broad Institute GCA_000408145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/145/GCF_000408145.1_Esch_coli_KTE198_V1/ na na na haploid bacteria 5356246 5212450 50.500000 0 16 108 NCBI RefSeq GCF_000408145.1-RS_2025_06_13 2025-06-13 5223 4847 92 na GCF_000408165.1 PRJNA224116 SAMN00974054 ASUL00000000.1 na 1181745 562 Escherichia coli KTE199 strain=KTE199 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE199_V1 Broad Institute GCA_000408165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/165/GCF_000408165.1_Esch_coli_KTE199_V1/ na na na haploid bacteria 5429149 5343630 50.500000 0 13 65 NCBI RefSeq GCF_000408165.1-RS_2025_06_13 2025-06-13 5282 4952 95 na GCF_000408185.1 PRJNA224116 SAMN00974055 ASUM00000000.1 na 1181746 562 Escherichia coli KTE200 strain=KTE200 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE200_V1 Broad Institute GCA_000408185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/185/GCF_000408185.1_Esch_coli_KTE200_V1/ na na na haploid bacteria 5269663 5219754 50.500000 0 7 48 NCBI RefSeq GCF_000408185.1-RS_2025_06_14 2025-06-14 5126 4852 89 na GCF_000408205.1 PRJNA224116 SAMN00974074 ASUN00000000.1 na 1181765 562 Escherichia coli KTE219 strain=KTE219 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE219_V1 Broad Institute GCA_000408205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/205/GCF_000408205.1_Esch_coli_KTE219_V1/ na na na haploid bacteria 5220697 5131457 50.500000 0 6 61 NCBI RefSeq GCF_000408205.1-RS_2026_06_14 2026-06-14 5064 4749 95 na GCF_000408225.1 PRJNA224116 SAMN00974076 ASUO00000000.1 na 1181767 562 Escherichia coli KTE221 strain=KTE221 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE221_V1 Broad Institute GCA_000408225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/225/GCF_000408225.1_Esch_coli_KTE221_V1/ na na na haploid bacteria 5139443 5091823 50.500000 0 18 52 NCBI RefSeq GCF_000408225.1-RS_2025_06_14 2025-06-14 4971 4690 99 na GCF_000408245.1 PRJNA224116 SAMN00974077 ASUP00000000.1 na 1181768 562 Escherichia coli KTE222 strain=KTE222 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE222_V1 Broad Institute GCA_000408245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/245/GCF_000408245.1_Esch_coli_KTE222_V1/ na na na haploid bacteria 4958809 4927595 51.000000 0 3 19 NCBI RefSeq GCF_000408245.1-RS_2025_06_14 2025-06-14 4753 4493 80 na GCF_000408265.1 PRJNA224116 SAMN00974080 ASUQ00000000.1 na 1181771 562 Escherichia coli KTE225 strain=KTE225 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE225_V1 Broad Institute GCA_000408265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/265/GCF_000408265.1_Esch_coli_KTE225_V1/ na na na haploid bacteria 5296280 5223374 50.500000 0 11 62 NCBI RefSeq GCF_000408265.1-RS_2025_06_14 2025-06-14 5165 4861 101 na GCF_000408285.1 PRJNA224116 SAMN00974081 ASUR00000000.1 na 1181772 562 Escherichia coli KTE226 strain=KTE226 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE226_V1 Broad Institute GCA_000408285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/285/GCF_000408285.1_Esch_coli_KTE226_V1/ na na na haploid bacteria 5136539 5101557 50.500000 0 18 38 NCBI RefSeq GCF_000408285.1-RS_2025_06_14 2025-06-14 4938 4603 90 na GCF_000408305.1 PRJNA224116 SAMN00974091 ASUS00000000.1 na 1181782 562 Escherichia coli KTE240 strain=KTE240 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE240_V1 Broad Institute GCA_000408305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/305/GCF_000408305.1_Esch_coli_KTE240_V1/ na na na haploid bacteria 4987044 4928129 50.500000 0 6 57 NCBI RefSeq GCF_000408305.1-RS_2025_06_14 2025-06-14 4821 4518 74 na GCF_000408325.1 PRJNA224116 SAMN00854611 ASUT00000000.1 na 1182659 1182659 Escherichia sp. KTE52 strain=KTE52 na latest Scaffold Major Full 2013-06-05 Esch_coli_KTE52_V1 Broad Institute GCA_000408325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/325/GCF_000408325.1_Esch_coli_KTE52_V1/ na na na haploid bacteria 4647930 4615592 50.500000 0 9 49 NCBI RefSeq GCF_000408325.1-RS_2025_01_01 2025-01-01 4477 4233 97 na GCF_000408345.1 PRJNA224116 SAMN00854620 ASUU00000000.1 na 1182668 562 Escherichia coli KTE61 strain=KTE61 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE61_V1 Broad Institute GCA_000408345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/345/GCF_000408345.1_Esch_coli_KTE61_V1/ na na na haploid bacteria 5029164 4950713 50.500000 0 10 76 NCBI RefSeq GCF_000408345.1-RS_2025_06_14 2025-06-14 4870 4560 90 na GCF_000408365.1 PRJNA224116 SAMN00854623 ASUV00000000.1 na 1182671 562 Escherichia coli KTE64 strain=KTE64 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE64_V1 Broad Institute GCA_000408365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/365/GCF_000408365.1_Esch_coli_KTE64_V1/ na na na haploid bacteria 5266965 5178168 50.500000 0 15 103 NCBI RefSeq GCF_000408365.1-RS_2025_06_14 2025-06-14 5201 4792 89 na GCF_000408385.1 PRJNA224116 SAMN00854627 ASUW00000000.1 na 1182675 562 Escherichia coli KTE68 strain=KTE68 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE68_V1 Broad Institute GCA_000408385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/385/GCF_000408385.1_Esch_coli_KTE68_V1/ na na na haploid bacteria 5649948 5516021 50.500000 0 19 86 NCBI RefSeq GCF_000408385.1-RS_2025_06_14 2025-06-14 5506 5188 90 na GCF_000408405.1 PRJNA224116 SAMN00854628 ASUX00000000.1 na 1182676 562 Escherichia coli KTE69 strain=KTE69 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE69_V1 Broad Institute GCA_000408405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/405/GCF_000408405.1_Esch_coli_KTE69_V1/ na na na haploid bacteria 5447328 5340827 50.500000 0 17 131 NCBI RefSeq GCF_000408405.1-RS_2026_06_14 2026-06-14 5504 5077 98 na GCF_000408425.1 PRJNA224116 SAMN00854629 ASUY00000000.1 na 1182677 562 Escherichia coli KTE70 strain=KTE70 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE70_V1 Broad Institute GCA_000408425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/425/GCF_000408425.1_Esch_coli_KTE70_V1/ na na na haploid bacteria 5488379 5375246 50.500000 0 23 116 NCBI RefSeq GCF_000408425.1-RS_2025_06_14 2025-06-14 5541 5126 97 na GCF_000408445.1 PRJNA224116 SAMN00854630 ASUZ00000000.1 na 1182678 562 Escherichia coli KTE71 strain=KTE71 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE71_V1 Broad Institute GCA_000408445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/445/GCF_000408445.1_Esch_coli_KTE71_V1/ na na na haploid bacteria 5238331 5062763 50.500000 0 14 121 NCBI RefSeq GCF_000408445.1-RS_2025_06_14 2025-06-14 5187 4751 103 na GCF_000408465.1 PRJNA224116 SAMN00854632 ASVA00000000.1 na 1182680 562 Escherichia coli KTE73 strain=KTE73 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE73_V1 Broad Institute GCA_000408465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/465/GCF_000408465.1_Esch_coli_KTE73_V1/ na na na haploid bacteria 5189718 5116882 51.000000 0 13 88 NCBI RefSeq GCF_000408465.1-RS_2025_06_14 2025-06-14 5163 4787 93 na GCF_000408485.1 PRJNA224116 SAMN00854633 ASVB00000000.1 na 1182681 562 Escherichia coli KTE74 strain=KTE74 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE74_V1 Broad Institute GCA_000408485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/485/GCF_000408485.1_Esch_coli_KTE74_V1/ na na na haploid bacteria 5218036 5118264 50.500000 0 14 102 NCBI RefSeq GCF_000408485.1-RS_2025_06_14 2025-06-14 5152 4766 95 na GCF_000408505.1 PRJNA224116 SAMN00854645 ASVC00000000.1 na 1182693 562 Escherichia coli KTE89 strain=KTE89 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE89_V1 Broad Institute GCA_000408505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/505/GCF_000408505.1_Esch_coli_KTE89_V1/ na na na haploid bacteria 5093381 5048123 50.500000 0 11 54 NCBI RefSeq GCF_000408505.1-RS_2025_06_14 2025-06-14 4900 4600 78 na GCF_000408525.1 PRJNA224116 SAMN00854649 ASVD00000000.1 na 1182697 1182697 Escherichia sp. KTE96 strain=KTE96 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE96_V1 Broad Institute GCA_000408525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/525/GCF_000408525.1_Esch_coli_KTE96_V1/ na na na haploid bacteria 4608490 4592997 50.500000 0 4 33 NCBI RefSeq GCF_000408525.1-RS_2025_01_01 2025-01-01 4472 4267 104 na GCF_000408545.1 PRJNA224116 SAMN00854650 ASVE00000000.1 na 1182698 562 Escherichia coli KTE98 strain=KTE98 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE98_V1 Broad Institute GCA_000408545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/545/GCF_000408545.1_Esch_coli_KTE98_V1/ na na na haploid bacteria 5209925 5174379 50.500000 0 5 27 NCBI RefSeq GCF_000408545.1-RS_2025_06_14 2025-06-14 5010 4696 83 na GCF_000408565.1 PRJNA224116 SAMN00854651 ASVF00000000.1 na 1182699 562 Escherichia coli KTE100 strain=KTE100 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE100_V1 Broad Institute GCA_000408565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/565/GCF_000408565.1_Esch_coli_KTE100_V1/ na na na haploid bacteria 5290842 5195692 51.000000 0 5 66 NCBI RefSeq GCF_000408565.1-RS_2025_06_14 2025-06-14 5187 4837 93 na GCF_000408585.1 PRJNA224116 SAMN00854653 ASVG00000000.1 na 1182701 562 Escherichia coli KTE102 strain=KTE102 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE102_V1 Broad Institute GCA_000408585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/585/GCF_000408585.1_Esch_coli_KTE102_V1/ na na na haploid bacteria 4954881 4880986 51.000000 0 8 64 NCBI RefSeq GCF_000408585.1-RS_2025_06_14 2025-06-14 4940 4481 107 na GCF_000408605.1 PRJNA224116 SAMN00854654 ASVH00000000.1 na 1182702 562 Escherichia coli KTE103 strain=KTE103 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE103_V1 Broad Institute GCA_000408605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/605/GCF_000408605.1_Esch_coli_KTE103_V1/ na na na haploid bacteria 5231194 5166910 51.000000 0 24 109 NCBI RefSeq GCF_000408605.1-RS_2025_06_14 2025-06-14 5270 4856 107 na GCF_000408625.1 PRJNA224116 SAMN00854655 ASVI00000000.1 na 1182703 562 Escherichia coli KTE107 strain=KTE107 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE107_V1 Broad Institute GCA_000408625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/625/GCF_000408625.1_Esch_coli_KTE107_V1/ na na na haploid bacteria 5182549 5093097 50.500000 0 18 91 NCBI RefSeq GCF_000408625.1-RS_2025_06_14 2025-06-14 5111 4741 94 na GCF_000408645.1 PRJNA224116 SAMN00854656 ASVJ00000000.1 na 1182704 562 Escherichia coli KTE108 strain=KTE108 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE108_V1 Broad Institute GCA_000408645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/645/GCF_000408645.1_Esch_coli_KTE108_V1/ na na na haploid bacteria 5254807 5138246 51.000000 0 7 86 NCBI RefSeq GCF_000408645.1-RS_2025_06_14 2025-06-14 5169 4803 99 na GCF_000408665.1 PRJNA224116 SAMN00854663 ASVK00000000.1 na 1182711 562 Escherichia coli KTE121 strain=KTE121 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE121_V1 Broad Institute GCA_000408665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/665/GCF_000408665.1_Esch_coli_KTE121_V1/ na na na haploid bacteria 5475918 5330508 50.500000 0 6 68 NCBI RefSeq GCF_000408665.1-RS_2025_06_15 2025-06-15 5251 4905 97 na GCF_000408685.1 PRJNA224116 SAMN00854665 ASVL00000000.1 na 1182713 562 Escherichia coli KTE126 strain=KTE126 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE126_V1 Broad Institute GCA_000408685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/685/GCF_000408685.1_Esch_coli_KTE126_V1/ na na na haploid bacteria 5050095 5004425 50.500000 0 10 39 NCBI RefSeq GCF_000408685.1-RS_2025_06_14 2025-06-14 4932 4597 93 na GCF_000408705.1 PRJNA224116 SAMN00854666 ASVM00000000.1 na 1182714 562 Escherichia coli KTE127 strain=KTE127 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE127_V1 Broad Institute GCA_000408705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/705/GCF_000408705.1_Esch_coli_KTE127_V1/ na na na haploid bacteria 5322418 5198674 50.500000 0 9 74 NCBI RefSeq GCF_000408705.1-RS_2025_06_14 2025-06-14 5072 4791 89 na GCF_000408725.1 PRJNA224116 SAMN00854667 ASVN00000000.1 na 1182715 562 Escherichia coli KTE130 strain=KTE130 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE130_V1 Broad Institute GCA_000408725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/725/GCF_000408725.1_Esch_coli_KTE130_V1/ na na na haploid bacteria 5307195 5189038 50.500000 0 19 114 NCBI RefSeq GCF_000408725.1-RS_2025_03_23 2025-03-23 5180 4778 98 na GCF_000408745.1 PRJNA224116 SAMN00854668 ASVO00000000.1 na 1182716 562 Escherichia coli KTE132 strain=KTE132 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE132_V1 Broad Institute GCA_000408745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/745/GCF_000408745.1_Esch_coli_KTE132_V1/ na na na haploid bacteria 5247289 5124140 50.500000 0 15 90 NCBI RefSeq GCF_000408745.1-RS_2025_06_14 2025-06-14 5089 4696 116 na GCF_000408765.1 PRJNA224116 SAMN00854669 ASVP00000000.1 na 1182717 562 Escherichia coli KTE134 strain=KTE134 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE134_V1 Broad Institute GCA_000408765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/765/GCF_000408765.1_Esch_coli_KTE134_V1/ na na na haploid bacteria 5364033 5317604 50.500000 0 10 50 NCBI RefSeq GCF_000408765.1-RS_2025_06_15 2025-06-15 5232 4948 85 na GCF_000408785.1 PRJNA224116 SAMN00854681 ASVQ00000000.1 na 1182729 562 Escherichia coli KTE155 strain=KTE155 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE155_V1 Broad Institute GCA_000408785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/785/GCF_000408785.1_Esch_coli_KTE155_V1/ na na na haploid bacteria 4686143 4652566 50.500000 0 5 32 NCBI RefSeq GCF_000408785.1-RS_2025_06_14 2025-06-14 4510 4234 99 na GCF_000408805.1 PRJNA224116 SAMN00854684 ASVR00000000.1 na 1182732 1182732 Escherichia sp. KTE159 strain=KTE159 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE159_V1 Broad Institute GCA_000408805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/805/GCF_000408805.1_Esch_coli_KTE159_V1/ na na na haploid bacteria 4809500 4776266 50.500000 0 7 48 NCBI RefSeq GCF_000408805.1-RS_2025_01_06 2025-01-06 4631 4385 88 na GCF_000408825.1 PRJNA224116 SAMN00854689 ASVS00000000.1 na 1182737 562 Escherichia coli KTE170 strain=KTE170 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE170_V1 Broad Institute GCA_000408825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/825/GCF_000408825.1_Esch_coli_KTE170_V1/ na na na haploid bacteria 5489240 5344695 50.500000 0 13 73 NCBI RefSeq GCF_000408825.1-RS_2025_06_14 2025-06-14 5289 4967 99 na GCF_000408845.1 PRJNA224116 SAMN01883166 ASVT00000000.1 na 1279005 1279005 Escherichia sp. KTE172 strain=KTE172 na latest Scaffold Major Full 2013-06-04 Esch_coli_KTE172_V1 Broad Institute GCA_000408845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/845/GCF_000408845.1_Esch_coli_KTE172_V1/ na na na haploid bacteria 5335010 5234805 50.500000 0 12 75 NCBI RefSeq GCF_000408845.1-RS_2025_01_06 2025-01-06 5189 4882 89 na GCF_000408865.1 PRJNA224116 SAMN02596970 ASWU00000000.1 na 1009714 287 Pseudomonas aeruginosa PAK strain=PAK na latest Scaffold Major Full 2013-06-04 Pseu_aeru_PAK_V1 University of Texas at Austin GCA_000408865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/865/GCF_000408865.1_Pseu_aeru_PAK_V1/ na na na haploid bacteria 6408825 6383688 66.500000 0 1 26 NCBI RefSeq GCF_000408865.1-RS_2025_02_20 2025-02-20 5914 5787 83 na GCF_000408885.1 PRJNA224116 SAMN02603262 na na 766760 1648923 Bacillus paralicheniformis ATCC 9945a strain=ATCC 9945a na latest Complete Genome Major Full 2013-06-05 ASM40888v1 Georg-August-University Goettingen GCA_000408885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/885/GCF_000408885.1_ASM40888v1/ na na na haploid bacteria 4376305 4376305 46.000000 1 1 1 NCBI RefSeq GCF_000408885.1-RS_2026_03_03 2026-03-03 4409 4227 98 23908277 GCF_000408945.1 PRJNA224116 SAMN02469864 APIO00000000.1 na 1268068 1268068 Pseudomonas sp. G5(2012) strain=G5 na latest Contig Major Full 2013-06-05 ASM40894v1 Gwangju Institution of Science and Technology GCA_000408945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/945/GCF_000408945.1_ASM40894v1/ na na na haploid bacteria 7204561 7204561 59.500000 0 223 223 NCBI RefSeq GCF_000408945.1-RS_2024_08_21 2024-08-21 6697 6486 67 na GCF_000408965.1 PRJNA224116 SAMN02141987 ARVM00000000.1 na 1284790 573 Klebsiella pneumoniae UHKPC05 strain=UHKPC05 na latest Contig Major Full 2013-06-05 gkp4v01 JCVI GCA_000408965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/965/GCF_000408965.1_gkp4v01/ na na na haploid bacteria 5502006 5502006 57.000000 0 187 187 NCBI RefSeq GCF_000408965.1-RS_2025_01_05 2025-01-05 5570 5378 62 24913165 GCF_000408985.1 PRJNA224116 SAMN02142019 ARVN00000000.1 na 1284814 573 Klebsiella pneumoniae UHKPC 52 strain=UHKPC 52 na latest Contig Major Full 2013-06-05 gkp28v01 JCVI GCA_000408985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/408/985/GCF_000408985.1_gkp28v01/ na na na haploid bacteria 5424339 5424339 57.500000 0 154 154 NCBI RefSeq GCF_000408985.1-RS_2025_01_05 2025-01-05 5442 5277 58 24913165 GCF_000409005.1 PRJNA224116 SAMN02142016 ARVO00000000.1 na 1284819 573 Klebsiella pneumoniae UHKPC45 strain=UHKPC45 na latest Contig Major Full 2013-06-05 gkp33v01 JCVI GCA_000409005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/005/GCF_000409005.1_gkp33v01/ na na na haploid bacteria 5620790 5620790 57.000000 0 210 210 NCBI RefSeq GCF_000409005.1-RS_2025_01_05 2025-01-05 5683 5505 63 24913165 GCF_000409025.1 PRJNA224116 SAMN02142048 ARVP00000000.1 na 1284827 573 Klebsiella pneumoniae VAKPC278 strain=VAKPC278 na latest Contig Major Full 2013-06-05 gkp41v01 JCVI GCA_000409025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/025/GCF_000409025.1_gkp41v01/ na na na haploid bacteria 5355272 5355272 57.500000 0 151 151 NCBI RefSeq GCF_000409025.1-RS_2025_01_05 2025-01-05 5388 5216 64 24913165 GCF_000409045.1 PRJNA224116 SAMN02141970 ARVQ00000000.1 na 1284821 573 Klebsiella pneumoniae UHKPC29 strain=UHKPC29 na latest Contig Major Full 2013-06-05 gkp35v01 JCVI GCA_000409045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/045/GCF_000409045.1_gkp35v01/ na na na haploid bacteria 5421295 5421295 57.000000 0 176 176 NCBI RefSeq GCF_000409045.1-RS_2025_01_05 2025-01-05 5468 5297 62 24913165 GCF_000409065.1 PRJNA224116 SAMN02141996 ARPO00000000.1 na 1284796 573 Klebsiella pneumoniae DMC0526 strain=DMC0526 na latest Contig Major Full 2013-06-05 gkp10v01 JCVI GCA_000409065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/065/GCF_000409065.1_gkp10v01/ na na na haploid bacteria 5555255 5555255 57.000000 0 167 167 NCBI RefSeq GCF_000409065.1-RS_2025_01_05 2025-01-05 5575 5407 61 24913165 GCF_000409085.1 PRJNA224116 SAMN02142018 ARPP00000000.1 na 1284801 573 Klebsiella pneumoniae UHKPC48 strain=UHKPC48 na latest Contig Major Full 2013-06-05 gkp15v01 JCVI GCA_000409085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/085/GCF_000409085.1_gkp15v01/ na na na haploid bacteria 5620362 5620362 57.000000 0 194 194 NCBI RefSeq GCF_000409085.1-RS_2025_01_05 2025-01-05 5662 5493 60 24913165 GCF_000409105.1 PRJNA224116 SAMN02142001 ARPQ00000000.1 na 1284822 573 Klebsiella pneumoniae UHKPC32 strain=UHKPC32 na latest Contig Major Full 2013-06-05 gkp36v01 JCVI GCA_000409105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/105/GCF_000409105.1_gkp36v01/ na na na haploid bacteria 5621477 5621477 57.000000 0 202 202 NCBI RefSeq GCF_000409105.1-RS_2025_01_05 2025-01-05 5671 5499 60 24913165 GCF_000409125.1 PRJNA224116 SAMN02142020 ARPR00000000.1 na 1284817 573 Klebsiella pneumoniae UHKPC57 strain=UHKPC57 na latest Contig Major Full 2013-06-05 gkp31v01 JCVI GCA_000409125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/125/GCF_000409125.1_gkp31v01/ na na na haploid bacteria 5671251 5671251 57.000000 0 246 246 NCBI RefSeq GCF_000409125.1-RS_2025_01_05 2025-01-05 5619 5404 60 24913165 GCF_000409145.1 PRJNA224116 SAMN02470764 ANHW00000000.1 na 1258575 1280 Staphylococcus aureus subsp. aureus H29 strain=H29 na latest Contig Major Full 2013-06-05 Staph-aureus(H29).fna Oklahoma State University GCA_000409145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/145/GCF_000409145.1_Staph-aureus_H29_.fna/ na na na haploid bacteria 2844315 2844315 33.000000 0 118 118 NCBI RefSeq GCF_000409145.1-RS_2025_01_14 2025-01-14 2923 2730 60 na GCF_000409165.1 PRJNA224116 SAMN02470765 ANIB00000000.1 na 1265302 1280 Staphylococcus aureus subsp. aureus PB32 strain=PB32 na latest Contig Major Full 2013-06-05 Staph-aureus(PB32).fna Oklahoma State University GCA_000409165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/165/GCF_000409165.1_Staph-aureus_PB32_.fna/ na na na haploid bacteria 2808519 2808519 32.500000 0 80 80 NCBI RefSeq GCF_000409165.1-RS_2025_02_02 2025-02-02 2865 2656 63 na GCF_000409225.1 PRJNA224116 SAMN02952933 AJKZ00000000.1 na 1159554 413497 Cronobacter dublinensis subsp. dublinensis LMG 23823 strain=LMG 23823 na latest Contig Major Full 2013-06-07 cddub187 final contigs Cronobacter Genus Genome Sequencing Consortium GCA_000409225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/225/GCF_000409225.1_cddub187_final_contigs/ na assembly from type material na haploid bacteria 4577611 4577611 58.000000 0 82 82 NCBI RefSeq GCF_000409225.1-RS_2025_12_16 2025-12-16 4398 4249 89 23724777 GCF_000409265.1 PRJNA224116 SAMN02952927 AJKT00000000.1 na 1159489 28141 Cronobacter sakazakii 2151 strain=2151 na latest Contig Major Full 2013-06-07 Csak 2151 final contigs Cronobacter sakazakii Genome Sequencing Consortium GCA_000409265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/265/GCF_000409265.1_Csak_2151_final_contigs/ na na na haploid bacteria 4382750 4382750 57.000000 0 60 60 NCBI RefSeq GCF_000409265.1-RS_2025_12_25 2025-12-25 4133 3980 79 23724777 GCF_000409285.1 PRJNA224116 SAMN02952928 AJKU00000000.1 na 1159613 413501 Cronobacter muytjensii ATCC 51329 strain=ATCC 51329 na latest Contig Major Full 2013-06-07 Cmuy final contigs Cronobacter Genus Genome Sequencing Consortium GCA_000409285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/285/GCF_000409285.1_Cmuy_final_contigs/ na assembly from type material na haploid bacteria 4322611 4322611 57.500000 0 72 72 NCBI RefSeq GCF_000409285.1-RS_2025_12_13 2025-12-13 4118 3968 81 23724777 GCF_000409305.1 PRJNA224116 SAMN02952929 AJKV00000000.1 na 1159491 413503 Cronobacter malonaticus LMG 23826 strain=LMG 23826 na latest Contig Major Full 2013-06-07 Cmal825 final contigs Cronobacter Genus Genome Sequencing Consortium GCA_000409305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/305/GCF_000409305.1_Cmal825_final_contigs/ na assembly from type material na haploid bacteria 4434037 4434037 57.000000 0 127 127 NCBI RefSeq GCF_000409305.1-RS_2025_12_16 2025-12-16 4342 4122 82 23724777 GCF_000409325.1 PRJNA224116 SAMN02952930 AJKW00000000.1 na 1074000 535744 Cronobacter universalis NCTC 9529 strain=NCTC 9529 na latest Contig Major Full 2013-06-07 Cuni9529 final contigs Cronobacter Genus Genome Sequencing Consortium GCA_000409325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/325/GCF_000409325.1_Cuni9529_final_contigs/ na assembly from type material na haploid bacteria 4334001 4334001 58.000000 0 35 35 NCBI RefSeq GCF_000409325.1-RS_2025_12_13 2025-12-13 4146 4003 84 23724777 GCF_000409345.2 PRJNA224116 SAMN02952931 na na 1159496 413497 Cronobacter dublinensis subsp. lactaridi LMG 23825 strain=LMG 23825 na latest Complete Genome Major Full 2025-04-27 E464 FDA/CFSAN GCA_000409345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/345/GCF_000409345.2_E464/ na assembly from type material na haploid bacteria 4465739 4465739 58.500000 2 2 2 NCBI RefSeq GCF_000409345.2-RS_2025_04_28 2025-04-28 4195 4016 119 na GCF_000409365.2 PRJNA224116 SAMN02952932 na na 1159560 413497 Cronobacter dublinensis subsp. lausannensis LMG 23824 strain=LMG 23824 na latest Complete Genome Major Full 2025-04-27 E515 FDA/CFSAN GCA_000409365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/365/GCF_000409365.2_E515/ na assembly from type material na haploid bacteria 4487112 4487112 58.000000 1 1 1 NCBI RefSeq GCF_000409365.2-RS_2025_04_28 2025-04-28 4298 4111 120 na GCF_000409385.1 PRJNA224116 SAMN02952935 AJLB00000000.1 na 1045857 28141 Cronobacter sakazakii ES713 strain=ES713 na latest Contig Major Full 2013-06-07 Csak713 final contigs FDA GCA_000409385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/385/GCF_000409385.1_Csak713_final_contigs/ na na na haploid bacteria 4551012 4551012 56.500000 0 156 156 NCBI RefSeq GCF_000409385.1-RS_2025_12_29 2025-12-29 4446 4052 115 23724777 GCF_000409405.1 PRJNA224116 SAMN02952936 AJLC00000000.1 na 1159614 28141 Cronobacter sakazakii ES35 strain=ES35 na latest Contig Major Full 2013-06-07 Csak35 final contigs Cronobacter sakazakii Genome Sequencing Consortium GCA_000409405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/405/GCF_000409405.1_Csak35_final_contigs/ na na na haploid bacteria 4347705 4347705 57.000000 0 183 183 NCBI RefSeq GCF_000409405.1-RS_2025_12_29 2025-12-29 4252 3890 105 23724777 GCF_000409485.1 PRJNA246203 SAMN02981444 ALVE00000000.1 reference genome 1116229 101852 Glarea lozoyensis ATCC 20868 strain=ATCC 20868 na latest Scaffold Major Full 2013-06-14 GLAREA Institute Of Microbiology, Chinese Academy of Sciences GCA_000409485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/485/GCF_000409485.1_GLAREA/ na assembly from type material na haploid fungi 39509734 39168639 46.000000 0 22 239 Institute Of Microbiology, Chinese Academy of Sciences Annotation submitted by Institute Of Microbiology, Chinese Academy of Sciences 2024-01-05 13081 13081 0 23688303 GCF_000409565.1 PRJNA224116 SAMN02471778 ANNO00000000.1 na 1201036 1201036 Pseudochrobactrum sp. AO18b strain=AO18b na latest Contig Major Full 2013-06-10 AO18b University of Georgia GCA_000409565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/565/GCF_000409565.1_AO18b/ na na na haploid bacteria 3751461 3751461 51.500000 0 506 506 NCBI RefSeq GCF_000409565.1-RS_2024_08_22 2024-08-22 3580 3440 55 na GCF_000409585.1 PRJNA224116 SAMN02471781 AMCA00000000.1 na 1201039 1423 Bacillus subtilis Hal1 strain=Hal1 na latest Contig Major Full 2013-06-10 Hal1 University of Georgia GCA_000409585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/585/GCF_000409585.1_Hal1/ na na na haploid bacteria 3979047 3979047 44.000000 0 345 345 NCBI RefSeq GCF_000409585.1-RS_2025_06_29 2025-06-29 4177 3957 101 na GCF_000409625.1 PRJNA224116 SAMN02471780 AMCC00000000.1 na 1201037 529 Brucella anthropi 60a strain=60a na latest Contig Major Full 2013-06-10 60a University of Georgia GCA_000409625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/625/GCF_000409625.1_60a/ na na na haploid bacteria 4590021 4590021 56.000000 0 1004 1004 NCBI RefSeq GCF_000409625.1-RS_2026_01_27 2026-01-27 4767 4495 52 na GCF_000409675.1 PRJNA224116 SAMN02469459 ATBQ00000000.1 na 1269760 1584 Lactobacillus delbrueckii subsp. lactis CRL581 strain=CRL581 na latest Scaffold Major Full 2013-06-10 lla_2.6 CERELA-CONICET GCA_000409675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/675/GCF_000409675.1_lla_2.6/ na na na haploid bacteria 2136818 1909893 49.500000 0 16 231 NCBI RefSeq GCF_000409675.1-RS_2026_01_30 2026-01-30 2017 1741 88 23929489 GCF_000409715.1 PRJNA224116 SAMN02470961 AQQH00000000.1 na 1316938 573 Klebsiella pneumoniae ATCC 25955 strain=ATCC 25955 na latest Contig Major Full 2013-06-10 Klebsiella pneumoniae ATCC 25955 Genome sequencing State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000409715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/715/GCF_000409715.1_Klebsiella_pneumoniae_ATCC_25955_Genome_sequencing/ na na na haploid bacteria 5292468 5292468 57.500000 0 87 87 NCBI RefSeq GCF_000409715.1-RS_2025_01_05 2025-01-05 5213 4994 99 23929480 GCF_000409735.1 PRJNA224116 SAMN02470962 AQQI00000000.1 na 1316939 573 Klebsiella pneumoniae G5-2 strain=G5-2 na latest Contig Major Full 2013-06-10 Klebsiella pneumonia G5-2 Genome sequencing State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000409735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/735/GCF_000409735.1_Klebsiella_pneumonia_G5-2_Genome_sequencing/ na na na haploid bacteria 5292693 5292693 57.500000 0 107 107 NCBI RefSeq GCF_000409735.1-RS_2024_12_31 2024-12-31 5222 5002 103 na GCF_000409755.1 PRJNA224116 SAMN02470945 AQQF00000000.1 na 1316931 1492 Clostridium butyricum DSM 10702 strain=DSM 10702 na latest Contig Major Full 2013-06-10 Clostridium butyricum DSM 10702 Genome sequencing State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University GCA_000409755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/755/GCF_000409755.1_Clostridium_butyricum_DSM_10702_Genome_sequencing/ na assembly from type material na haploid bacteria 4596811 4596811 28.500000 0 207 207 NCBI RefSeq GCF_000409755.1-RS_2026_04_17 2026-04-17 4283 4157 39 23908293 GCF_000409775.1 PRJNA224116 SAMN02471787 ASTJ00000000.1 reference genome 1121939 258591 Litchfieldella anticariensis FP35 = DSM 16096 strain=FP35 na latest Scaffold Major Full 2013-06-24 Han1.0 UNIVERSITY OF GRANADA GCA_000409775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/775/GCF_000409775.1_Han1.0/ na assembly from type material na haploid bacteria 5070590 5067645 58.500000 0 21 45 NCBI RefSeq GCF_000409775.1-RS_2025_08_25 2025-08-25 4739 4628 67 23868129 GCF_000409815.1 PRJNA224116 SAMN02469722 ANKY00000000.1 na 1256219 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp230 strain=Lpp230 na latest Contig Major Full 2013-06-11 Lpp230.v.1 Danone Research GCA_000409815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/815/GCF_000409815.1_Lpp230.v.1/ na na na haploid bacteria 2892319 2892319 46.500000 0 144 144 NCBI RefSeq GCF_000409815.1-RS_2026_05_01 2026-05-01 2840 2637 50 23894338 GCF_000409835.1 PRJNA224116 SAMN02469714 ANKV00000000.1 na 1256230 1597 Lacticaseibacillus paracasei subsp. tolerans Lpl7 strain=Lpl7 na latest Contig Major Full 2013-06-11 Lpl7v.1 Danone Research GCA_000409835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/835/GCF_000409835.1_Lpl7v.1/ na na na haploid bacteria 3089104 3089104 46.000000 0 91 91 NCBI RefSeq GCF_000409835.1-RS_2026_04_21 2026-04-21 3064 2914 62 23894338 GCF_000409855.1 PRJNA224116 SAMN02469705 ANKW00000000.1 na 1256218 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp122 strain=Lpp122 na latest Contig Major Full 2013-06-11 Lpp122.v.1 Danone Research GCA_000409855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/855/GCF_000409855.1_Lpp122.v.1/ na na na haploid bacteria 2920756 2920756 46.500000 0 201 201 NCBI RefSeq GCF_000409855.1-RS_2026_04_26 2026-04-26 2919 2714 57 23894338 GCF_000409895.1 PRJNA224116 SAMN02469716 ANMN00000000.1 na 1256226 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp226 strain=Lpp226 na latest Contig Major Full 2013-06-11 Lpp226.v.1 Danone Research GCA_000409895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/895/GCF_000409895.1_Lpp226.v.1/ na na na haploid bacteria 3009478 3009478 46.000000 0 131 131 NCBI RefSeq GCF_000409895.1-RS_2026_04_26 2026-04-26 3026 2834 58 23894338 GCF_000409915.1 PRJNA224116 SAMN02470554 AQTL00000000.1 na 1298924 747 Pasteurella multocida 1500E strain=1500E na latest Contig Major Full 2013-06-11 1500E Moredun Research Institute GCA_000409915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/409/915/GCF_000409915.1_1500E/ na na na haploid bacteria 2210576 2210576 40.500000 0 265 265 NCBI RefSeq GCF_000409915.1-RS_2026_01_30 2026-01-30 2195 2095 30 na GCF_000410015.1 PRJNA224116 SAMN02469717 ANKF00000000.1 na 1256209 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp221 strain=Lpp221 na latest Contig Major Full 2013-06-11 ASM41001v1 Danone Research GCA_000410015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/015/GCF_000410015.1_ASM41001v1/ na na na haploid bacteria 3044896 3044896 46.000000 0 265 265 NCBI RefSeq GCF_000410015.1-RS_2026_04_27 2026-04-27 3073 2835 52 23894338 GCF_000410035.1 PRJNA224116 SAMN02469726 ANKJ00000000.1 na 1256213 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp49 strain=Lpp49 na latest Contig Major Full 2013-06-11 ASM41003v1 Danone Research GCA_000410035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/035/GCF_000410035.1_ASM41003v1/ na na na haploid bacteria 2924421 2924421 46.000000 0 109 109 NCBI RefSeq GCF_000410035.1-RS_2026_04_21 2026-04-21 2876 2726 54 23894338 GCF_000410135.1 PRJNA224116 SAMN02469707 ANMH00000000.1 na 1256220 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp17 strain=Lpp17 na latest Contig Major Full 2013-06-11 Lpp17.v.1 Danone Research GCA_000410135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/135/GCF_000410135.1_Lpp17.v.1/ na na na haploid bacteria 2954673 2954673 46.500000 0 131 131 NCBI RefSeq GCF_000410135.1-RS_2026_04_25 2026-04-25 2933 2749 61 23894338 GCF_000410235.1 PRJNA224116 SAMN02469728 ANJU00000000.1 na 1256199 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp74 strain=Lpp74 na latest Contig Major Full 2013-06-11 ASM41023v1 Danone Research GCA_000410235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/235/GCF_000410235.1_ASM41023v1/ na na na haploid bacteria 3032714 3032714 46.500000 0 190 190 NCBI RefSeq GCF_000410235.1-RS_2026_04_26 2026-04-26 3023 2827 55 23894338 GCF_000410295.1 PRJNA224116 SAMN02469702 ANJY00000000.1 na 1256203 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp189 strain=Lpp189 na latest Contig Major Full 2013-06-11 ASM41029v1 Danone Research GCA_000410295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/295/GCF_000410295.1_ASM41029v1/ na na na haploid bacteria 2923257 2923257 46.000000 0 295 295 NCBI RefSeq GCF_000410295.1-RS_2026_05_02 2026-05-02 3010 2730 57 23894338 GCF_000410335.1 PRJNA224116 SAMN02469703 ANKB00000000.1 na 1256229 1597 Lacticaseibacillus paracasei subsp. tolerans Lpl14 strain=Lpl14 na latest Contig Major Full 2013-06-11 ASM41033v1 D GCA_000410335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/335/GCF_000410335.1_ASM41033v1/ na na na haploid bacteria 3014095 3014095 46.500000 0 141 141 NCBI RefSeq GCF_000410335.1-RS_2026_04_26 2026-04-26 3012 2818 54 23894338 GCF_000410415.1 PRJNA224116 SAMN02469718 ANKG00000000.1 na 1256210 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp37 strain=Lpp37 na latest Contig Major Full 2013-06-11 ASM41041v1 Danone Research GCA_000410415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/415/GCF_000410415.1_ASM41041v1/ na na na haploid bacteria 2978454 2978454 46.500000 0 264 264 NCBI RefSeq GCF_000410415.1-RS_2026_04_27 2026-04-27 3068 2811 60 23894338 GCF_000410455.1 PRJNA224116 SAMN02469725 ANKI00000000.1 na 1256212 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp43 strain=Lpp43 na latest Contig Major Full 2013-06-11 ASM41045v1 Danone Research GCA_000410455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/455/GCF_000410455.1_ASM41045v1/ na na na haploid bacteria 3116282 3116282 46.000000 0 205 205 NCBI RefSeq GCF_000410455.1-RS_2026_04_29 2026-04-29 3164 2915 57 23894338 GCF_000410475.1 PRJNA224116 SAMN02641495 ANKM00000000.1 na 1256216 1597 Lacticaseibacillus paracasei subsp. paracasei Lpp125 strain=Lpp125 na latest Contig Major Full 2013-06-11 ASM41047v1 Danone Research GCA_000410475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/475/GCF_000410475.1_ASM41047v1/ na na na haploid bacteria 3013500 3013500 46.000000 0 192 192 NCBI RefSeq GCF_000410475.1-RS_2026_04_27 2026-04-27 3102 2859 59 23894338 GCF_000410515.1 PRJNA224116 SAMN02603907 na na 1166130 1166130 Enterobacter sp. R4-368 strain=R4-368 na latest Complete Genome Major Full 2013-06-11 ASM41051v1 Temasek Lifesciences Laboratory GCA_000410515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/515/GCF_000410515.1_ASM41051v1/ na na na haploid bacteria 5155034 5155034 54.000000 2 2 2 NCBI RefSeq GCF_000410515.1-RS_2024_07_01 2024-07-01 4932 4760 121 23908287 GCF_000410535.2 PRJNA224116 SAMN02603005 na reference genome 243276 160 Treponema pallidum subsp. pallidum str. Nichols strain=Nichols na latest Chromosome Major Full 2013-07-03 ASM41053v2 Baylor College of Medicine GCA_000410535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/535/GCF_000410535.2_ASM41053v2/ na assembly from type material na haploid bacteria 1139633 1139605 53.000000 1 1 3 NCBI RefSeq GCF_000410535.2-RS_2026_03_02 2026-03-02 1041 977 54 24058545 GCF_000410555.1 PRJNA224116 SAMN00000318 na na 455434 160 Treponema pallidum subsp. pallidum SS14 strain=SS14 na latest Chromosome Major Full 2013-06-11 ASM41055v1 Baylor College of Medicine GCA_000410555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/555/GCF_000410555.1_ASM41055v1/ na na na haploid bacteria 1139569 1139307 53.000000 1 1 8 NCBI RefSeq GCF_000410555.1-RS_2026_04_03 2026-04-03 1046 982 54 24058545 GCF_000410575.1 PRJNA224116 SAMN02604103 na na 1331671 303 Pseudomonas putida H8234 strain=H8234 na latest Complete Genome Major Full 2013-06-11 ASM41057v1 Universidad de Huelva GCA_000410575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/575/GCF_000410575.1_ASM41057v1/ na na na haploid bacteria 6870827 6870827 61.500000 1 1 1 NCBI RefSeq GCF_000410575.1-RS_2025_02_14 2025-02-14 6510 6255 90 23868128 GCF_000410595.1 PRJNA224116 SAMN02470970 APVE00000000.1 na 1266716 216816 Bifidobacterium longum subsp. longum CMCC P0001 strain=CMCC P0001 na latest Scaffold Major Full 2013-06-11 ASM41059v1 Shanghai Sine Pharmaceutical Co., Ltd. GCA_000410595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/595/GCF_000410595.1_ASM41059v1/ na na na haploid bacteria 2424349 2422681 60.000000 0 72 135 NCBI RefSeq GCF_000410595.1-RS_2026_01_30 2026-01-30 2100 1952 60 24029762 GCF_000410615.1 PRJNA224116 SAMN02469431 APCQ00000000.1 na 1298855 1298855 Novosphingobium sp. B-7 strain=B-7 na latest Scaffold Major Full 2013-06-17 ASM41061v1 Environmental engineering institut, Central south university, Hunan Province, China GCA_000410615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/615/GCF_000410615.1_ASM41061v1/ na na na haploid bacteria 4909165 4864130 65.000000 0 491 848 NCBI RefSeq GCF_000410615.1-RS_2024_08_22 2024-08-22 4984 4563 79 22921251 GCF_000410635.1 PRJNA224116 SAMN02469432 APCR00000000.1 na 1055192 1055192 Comamonas sp. B-9 strain=B-9 na latest Scaffold Major Full 2013-06-17 ASM41063v1 Environmental engineering institut, Central south university, Hunan Province, China GCA_000410635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/635/GCF_000410635.1_ASM41063v1/ na na na haploid bacteria 5243763 5217447 63.500000 0 312 624 NCBI RefSeq GCF_000410635.1-RS_2024_09_08 2024-09-08 5221 4886 77 22380656 GCF_000410655.2 PRJNA224116 SAMN02435964 AIBH00000000.1 na 1126911 562 Escherichia coli C639_08 strain=C639_08 na latest Contig Minor Full 2013-06-11 ASM41065v2 IGS GCA_000410655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/655/GCF_000410655.2_ASM41065v2/ na na na haploid bacteria 4913517 4913517 50.500000 0 148 148 NCBI RefSeq GCF_000410655.2-RS_2026_03_21 2026-03-21 4968 4662 86 23868135 GCF_000410675.2 PRJNA224116 SAMN02435913 AIBZ00000000.1 na 1126932 562 Escherichia coli C844_97 strain=C844_97 na latest Contig Minor Full 2013-06-11 ASM41067v2 IGS GCA_000410675.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/675/GCF_000410675.2_ASM41067v2/ na na na haploid bacteria 4664108 4664108 50.500000 0 116 116 NCBI RefSeq GCF_000410675.2-RS_2026_03_21 2026-03-21 4641 4395 74 23868135 GCF_000410795.1 PRJNA224116 SAMN02470055 ASJE00000000.1 na 1328309 1590 Lactiplantibacillus plantarum IPLA88 strain=IPLA88 na latest Contig Major Full 2013-06-13 LplantarumLP882.0 Instituto de Productos Lacteos de Asturias (IPLA-CSIC) GCA_000410795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/795/GCF_000410795.1_LplantarumLP882.0/ na na na haploid bacteria 3254055 3254055 44.500000 0 208 208 NCBI RefSeq GCF_000410795.1-RS_2026_01_27 2026-01-27 3178 3044 56 23887921 GCF_000410815.1 PRJNA224116 SAMN01909281 AQGK00000000.1 na 485917 984 Pedobacter heparinus DSM 2366 strain=DSM 2366 na latest Contig Major Full 2013-06-13 Pedobacter heparinus DSM 2366 HGAP Assembly Pacific Biosciences GCA_000410815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/815/GCF_000410815.1_Pedobacter_heparinus_DSM_2366_HGAP_Assembly/ na assembly from type material na haploid bacteria 5171533 5171533 42.000000 0 3 3 NCBI RefSeq GCF_000410815.1-RS_2026_03_30 2026-03-30 4299 4226 69 na GCF_000410875.1 PRJNA224116 SAMN02470162 AROI00000000.1 reference genome 1323663 553151 Halopseudomonas pelagia CL-AP6 strain=CL-AP6 na latest Contig Major Full 2013-06-13 KCCM90073 KOPRI GCA_000410875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/875/GCF_000410875.1_KCCM90073/ na assembly from type material na haploid bacteria 4642307 4642307 57.500000 0 81 81 NCBI RefSeq GCF_000410875.1-RS_2025_08_20 2025-08-20 4266 4118 54 24009125 GCF_000410895.1 PRJNA224116 SAMN01985492 AQTK00000000.1 na 360118 28450 Burkholderia pseudomallei 406e strain=406e na latest Contig Major Full 2013-06-13 406e_combined Northern Arizona University GCA_000410895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/895/GCF_000410895.1_406e_combined/ na na na haploid bacteria 7235897 7235897 68.000000 0 115 115 NCBI RefSeq GCF_000410895.1-RS_2026_01_13 2026-01-13 6484 6227 77 na GCF_000410915.1 PRJNA224116 SAMN02471389 ARWU00000000.1 na 1327991 1282 Staphylococcus epidermidis UC7032 strain=UC7032 na latest Contig Major Full 2013-06-13 1st assembly Universita Cattolica del Sacro Cuore GCA_000410915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/915/GCF_000410915.1_1st_assembly/ na na na haploid bacteria 2491993 2491993 32.000000 0 119 119 NCBI RefSeq GCF_000410915.1-RS_2025_04_15 2025-04-15 2412 2275 32 24072859 GCF_000410995.1 PRJNA224116 SAMN02603119 na na 1340495 1598 Limosilactobacillus reuteri I5007 strain=I5007 na latest Complete Genome Major Full 2013-06-14 ASM41099v1 China Agricultural University GCA_000410995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/410/995/GCF_000410995.1_ASM41099v1/ na na na haploid bacteria 2093275 2093275 39.000000 7 7 7 NCBI RefSeq GCF_000410995.1-RS_2025_09_10 2025-09-10 2102 1921 92 na GCF_000411015.1 PRJNA224116 SAMN02469382 APJQ00000000.1 na 1302647 1352 Enterococcus faecium LCT-EF297 strain=LCT-EF297 na latest Scaffold Major Full 2013-06-17 Version 1 for Enterococcus faecium Strain LCT-EF297 genome BGI-Shenzhen GCA_000411015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/015/GCF_000411015.1_Version_1_for_Enterococcus_faecium_Strain_LCT-EF297_genome/ na na na haploid bacteria 2668148 2600919 38.000000 0 15 92 NCBI RefSeq GCF_000411015.1-RS_2026_01_19 2026-01-19 2550 2428 47 24558244 GCF_000411035.1 PRJNA224116 SAMN02469380 APJR00000000.1 na 1302646 1352 Enterococcus faecium LCT-EF301 strain=LCT-EF301 na latest Scaffold Major Full 2013-06-17 Version 1 for Enterococcus faecium Strain LCT-EF301 genome BGI-Shenzhen GCA_000411035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/035/GCF_000411035.1_Version_1_for_Enterococcus_faecium_Strain_LCT-EF301_genome/ na na na haploid bacteria 2696027 2592769 38.000000 0 14 117 NCBI RefSeq GCF_000411035.1-RS_2026_01_19 2026-01-19 2542 2428 44 24604642 GCF_000411115.1 PRJNA224116 SAMN02595375 ADDA00000000.1 na 641143 45242 Capnocytophaga granulosa ATCC 51502 strain=ATCC 51502 na latest Scaffold Major Full 2013-06-14 Capn_gran_ATCC_51502_V1 Broad Institute GCA_000411115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/115/GCF_000411115.1_Capn_gran_ATCC_51502_V1/ na assembly from type material na haploid bacteria 2746278 2740113 41.500000 0 20 28 NCBI RefSeq GCF_000411115.1-RS_2026_05_16 2026-05-16 2551 2466 53 na GCF_000411135.1 PRJNA224116 SAMN02596751 AGWM00000000.1 na 883067 59505 Actinotignum schaalii FB123-CNA-2 strain=FB123-CNA-2 na latest Scaffold Major Full 2013-06-14 Acti_scha_FB123-CNA2_V1 Broad Institute GCA_000411135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/135/GCF_000411135.1_Acti_scha_FB123-CNA2_V1/ na na na haploid bacteria 2092357 2065705 61.000000 0 4 15 NCBI RefSeq GCF_000411135.1-RS_2025_03_13 2025-03-13 1766 1702 54 na GCF_000411155.1 PRJNA224116 SAMN02596752 AGWN00000000.1 na 883069 66228 Gleimia europaea ACS-120-V-Col10b strain=ACS-120-V-Col10b na latest Scaffold Major Full 2013-06-14 Acti_euro_ACS-120-V-COL10B_V1 Broad Institute GCA_000411155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/155/GCF_000411155.1_Acti_euro_ACS-120-V-COL10B_V1/ na na na haploid bacteria 1906711 1905561 56.500000 0 3 5 NCBI RefSeq GCF_000411155.1-RS_2026_06_22 2026-06-22 1722 1651 62 na GCF_000411175.1 PRJNA224116 SAMN02596778 AGZR00000000.1 na 883161 33012 Propionimicrobium lymphophilum ACS-093-V-SCH5 strain=ACS-093-V-SCH5 na latest Scaffold Major Full 2013-06-14 Prop_lymp_ACS-093-V-SCH5_V1 Broad Institute GCA_000411175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/175/GCF_000411175.1_Prop_lymp_ACS-093-V-SCH5_V1/ na na na haploid bacteria 2266775 2261463 56.000000 0 1 9 NCBI RefSeq GCF_000411175.1-RS_2025_12_11 2025-12-11 2137 2053 55 na GCF_000411195.1 PRJNA224116 SAMN02596773 AGYX00000000.1 na 883101 80866 Delftia acidovorans CCUG 274B strain=CCUG 274B na latest Scaffold Major Full 2013-06-14 Delf_acid_CCUG_274B_V1 Broad Institute GCA_000411195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/195/GCF_000411195.1_Delf_acid_CCUG_274B_V1/ na na na haploid bacteria 6953182 6942246 66.500000 0 79 90 NCBI RefSeq GCF_000411195.1-RS_2025_01_31 2025-01-31 6529 6356 80 na GCF_000411215.1 PRJNA224116 SAMN02596774 AGYY00000000.1 na 883100 80866 Delftia acidovorans CCUG 15835 strain=CCUG 15835 na latest Scaffold Major Full 2013-06-14 Delf_acid_CCUG_15835_V1 Broad Institute GCA_000411215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/215/GCF_000411215.1_Delf_acid_CCUG_15835_V1/ na na na haploid bacteria 6823175 6807250 66.500000 0 55 68 NCBI RefSeq GCF_000411215.1-RS_2025_01_31 2025-01-31 6349 6208 75 na GCF_000411235.1 PRJNA224116 SAMN02596730 AGEM00000000.1 na 1078764 1078764 Corynebacterium sp. HFH0082 strain=HFH0082 na latest Scaffold Major Full 2013-06-14 Cory_sp_HFH0082_V1 Broad Institute GCA_000411235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/235/GCF_000411235.1_Cory_sp_HFH0082_V1/ na na na haploid bacteria 2493224 2471628 59.000000 0 1 14 NCBI RefSeq GCF_000411235.1-RS_2024_08_13 2024-08-13 2179 2094 62 na GCF_000411255.1 PRJNA224116 SAMN02596731 AGEN00000000.1 na 1078505 1078505 Paenibacillus sp. HGH0039 strain=HGH0039 na latest Scaffold Major Full 2013-06-14 Paen_sp_HGH0039_V1 Broad Institute GCA_000411255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/255/GCF_000411255.1_Paen_sp_HGH0039_V1/ na na na haploid bacteria 6362995 6290824 53.000000 0 5 48 NCBI RefSeq GCF_000411255.1-RS_2025_08_25 2025-08-25 5772 5609 89 na GCF_000411275.1 PRJNA224116 SAMN02596732 AGEO00000000.1 na 1078083 1078083 Staphylococcus sp. HGB0015 strain=HGB0015 na latest Scaffold Major Full 2013-06-14 Stap_sp_HGB0015_V1 Broad Institute GCA_000411275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/275/GCF_000411275.1_Stap_sp_HGB0015_V1/ na na na haploid bacteria 2478823 2461179 36.000000 0 4 32 NCBI RefSeq GCF_000411275.1-RS_2025_08_25 2025-08-25 2350 2197 75 na GCF_000411295.1 PRJNA224116 SAMN02596733 AGEQ00000000.1 na 1078085 1078085 Paenisporosarcina sp. HGH0030 strain=HGH0030 na latest Scaffold Major Full 2013-06-14 Paen_sp_HGH0030_V1 Broad Institute GCA_000411295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/295/GCF_000411295.1_Paen_sp_HGH0030_V1/ na na na haploid bacteria 3522309 3493880 39.000000 0 5 20 NCBI RefSeq GCF_000411295.1-RS_2024_08_13 2024-08-13 3505 3381 77 na GCF_000411315.1 PRJNA224116 SAMN02596734 AGER00000000.1 na 1078086 1078086 Streptomyces sp. HGB0020 strain=HGB0020 na latest Scaffold Major Full 2013-06-14 Stre_sp_HGB0020_V1 Broad Institute GCA_000411315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/315/GCF_000411315.1_Stre_sp_HGB0020_V1/ na na na haploid bacteria 9361238 9339119 70.500000 0 9 36 NCBI RefSeq GCF_000411315.1-RS_2025_03_25 2025-03-25 8594 8385 83 na GCF_000411375.1 PRJNA224116 SAMN02596973 ATBY00000000.1 reference genome 1125779 598660 Corynebacterium pyruviciproducens ATCC BAA-1742 strain=ATCC BAA-1742 na latest Scaffold Major Full 2013-06-14 Cory_pyru_17730_V1 Broad Institute GCA_000411375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/375/GCF_000411375.1_Cory_pyru_17730_V1/ na assembly from type material na haploid bacteria 2722973 2703797 61.000000 0 3 18 NCBI RefSeq GCF_000411375.1-RS_2025_05_02 2025-05-02 2470 2366 62 na GCF_000411395.1 PRJNA224116 SAMN02596974 ATBZ00000000.1 na 1203555 1203555 Acidaminococcus sp. HPA0509 strain=HPA0509 na latest Scaffold Major Full 2013-06-14 Acid_sp_HPA0509_V1 Broad Institute GCA_000411395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/395/GCF_000411395.1_Acid_sp_HPA0509_V1/ na na na haploid bacteria 2287856 2243882 50.000000 0 1 38 NCBI RefSeq GCF_000411395.1-RS_2024_08_13 2024-08-13 2130 2040 65 na GCF_000411415.1 PRJNA224116 SAMN02596975 ATCA00000000.1 na 1203556 1203556 Actinomyces sp. HPA0247 strain=HPA0247 na latest Scaffold Major Full 2013-06-14 Acti_sp_HPA0247_V1 Broad Institute GCA_000411415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/415/GCF_000411415.1_Acti_sp_HPA0247_V1/ na na na haploid bacteria 2430444 2428384 65.000000 0 3 14 NCBI RefSeq GCF_000411415.1-RS_2024_07_01 2024-07-01 2070 1984 64 na GCF_000411435.1 PRJNA224116 SAMN02596976 ATCB00000000.1 na 1203540 1685 Bifidobacterium breve HPH0326 strain=HPH0326 na latest Scaffold Major Full 2013-06-14 Bifi_brev_HPH0326_V1 Broad Institute GCA_000411435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/435/GCF_000411435.1_Bifi_brev_HPH0326_V1/ na na na haploid bacteria 2504312 2502557 59.000000 0 4 6 NCBI RefSeq GCF_000411435.1-RS_2026_01_30 2026-01-30 2205 2051 65 na GCF_000411455.1 PRJNA224116 SAMN02596977 ATCC00000000.1 na 1203549 712383 Microbacterium sp. oral taxon 186 str. F0373 strain=F0373 na latest Scaffold Major Full 2013-06-14 Micr_sp_oral_taxon_186_F0373_V1 Broad Institute GCA_000411455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/455/GCF_000411455.1_Micr_sp_oral_taxon_186_F0373_V1/ na na na haploid bacteria 3168064 3164554 69.000000 0 7 13 NCBI RefSeq GCF_000411455.1-RS_2025_08_25 2025-08-25 3080 2967 79 na GCF_000411475.1 PRJNA224116 SAMN02596978 ATCD00000000.1 na 1203590 1203590 Streptococcus sp. HPH0090 strain=HPH0090 na latest Scaffold Major Full 2013-06-14 Stre_sp_HPH0090_V1 Broad Institute GCA_000411475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/475/GCF_000411475.1_Stre_sp_HPH0090_V1/ na na na haploid bacteria 1765113 1753968 39.500000 0 4 14 NCBI RefSeq GCF_000411475.1-RS_2025_08_25 2025-08-25 1733 1627 76 na GCF_000411515.1 PRJNA224116 SAMN02596980 ATCF00000000.1 na 1203554 40545 Sutterella wadsworthensis HGA0223 strain=HGA0223 na latest Scaffold Major Full 2013-06-14 Sutt_wads_HGA0223_V1 Broad Institute GCA_000411515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/515/GCF_000411515.1_Sutt_wads_HGA0223_V1/ na na na haploid bacteria 2988328 2949098 55.000000 0 3 39 NCBI RefSeq GCF_000411515.1-RS_2026_04_23 2026-04-23 2449 2335 78 na GCF_000411535.1 PRJNA224116 SAMN02596981 ATCG00000000.1 na 1203593 1203593 Veillonella sp. HPA0037 strain=HPA0037 na latest Scaffold Major Full 2013-06-14 Veil_sp_HPA0037_V1 Broad Institute GCA_000411535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/535/GCF_000411535.1_Veil_sp_HPA0037_V1/ na na na haploid bacteria 2071607 2058107 39.000000 0 3 25 NCBI RefSeq GCF_000411535.1-RS_2024_08_13 2024-08-13 1905 1833 60 na GCF_000411555.1 PRJNA224116 SAMN02596982 ATCH00000000.1 na 1203602 712156 Atopobium sp. oral taxon 199 str. F0494 strain=F0494 na latest Scaffold Major Full 2013-06-14 Atop_sp_oral_taxon_199_F0494_V1 Broad Institute GCA_000411555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/555/GCF_000411555.1_Atop_sp_oral_taxon_199_F0494_V1/ na na na haploid bacteria 1665560 1660282 52.000000 0 2 5 NCBI RefSeq GCF_000411555.1-RS_2024_08_13 2024-08-13 1513 1443 60 na GCF_000411575.1 PRJNA224116 SAMN02596983 ATCI00000000.1 na 1203603 712216 Capnocytophaga sp. oral taxon 336 str. F0502 strain=F0502 na latest Scaffold Major Full 2013-06-14 Capn_sp_oral_taxon_336_F0502_V1 Broad Institute GCA_000411575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/575/GCF_000411575.1_Capn_sp_oral_taxon_336_F0502_V1/ na na na haploid bacteria 2788212 2783006 39.500000 0 8 30 NCBI RefSeq GCF_000411575.1-RS_2025_01_08 2025-01-08 2404 2296 79 na GCF_000411595.1 PRJNA224116 SAMN02469679 ANAT00000000.1 na 1244087 78058 Paenibacillus lentimorbus NRRL B-30488 strain=NRRL B-30488 na latest Contig Major Full 2013-06-14 PanLen2.5 CSIR-National Botanical Research Institute GCA_000411595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/595/GCF_000411595.1_PanLen2.5/ na na na haploid bacteria 3912556 3912556 46.500000 0 47 47 NCBI RefSeq GCF_000411595.1-RS_2026_05_09 2026-05-09 3963 3064 90 na GCF_000411635.1 PRJNA224116 SAMN02471391 ASAM00000000.1 na 1328869 1352 Enterococcus faecium UC7267 strain=UC7267 na latest Contig Major Full 2013-06-14 ASM41163v1 Universita Cattolica del Sacro Cuore GCA_000411635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/635/GCF_000411635.1_ASM41163v1/ na na na haploid bacteria 2697670 2697670 38.000000 0 458 458 NCBI RefSeq GCF_000411635.1-RS_2026_01_24 2026-01-24 2781 2535 27 na GCF_000411655.2 PRJNA224116 SAMN02471390 na na 1328870 1352 Enterococcus faecium UC7251 strain=UC7251 na latest Chromosome Major Full 2021-10-28 ASM41165v2 Universita Cattolica del Sacro Cuore GCA_000411655.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/655/GCF_000411655.2_ASM41165v2/ na na na haploid bacteria 2807919 2807619 38.000000 3 3 3 NCBI RefSeq GCF_000411655.2-RS_2026_01_15 2026-01-15 2766 2514 91 na GCF_000411675.1 PRJNA224116 SAMN02146680 ASGY00000000.1 na 1324332 294 Pseudomonas fluorescens LMG 5329 strain=LMG 5329 na latest Contig Major Full 2013-06-14 Pse.Fluo1.0 Centre of Microbial and Plant Genetics (CMPG), University of Leuven GCA_000411675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/675/GCF_000411675.1_Pse.Fluo1.0/ na na na haploid bacteria 6870021 6870021 60.500000 0 253 253 NCBI RefSeq GCF_000411675.1-RS_2025_08_18 2025-08-18 6417 6254 62 23887909 GCF_000411715.1 PRJNA224116 SAMN02471899 ASJW00000000.1 na 1315307 1313 Streptococcus pneumoniae MNZ11b strain=MNZ11b na latest Scaffold Major Full 2013-06-18 ASM41171v1 University of Mississippi medical center GCA_000411715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/715/GCF_000411715.1_ASM41171v1/ na na na haploid bacteria 2021777 2021497 39.500000 0 54 58 NCBI RefSeq GCF_000411715.1-RS_2026_02_02 2026-02-02 2067 1862 35 23887920 GCF_000411755.1 PRJNA224116 SAMN02471896 ASJP00000000.1 na 1315309 1313 Streptococcus pneumoniae MNZ37 strain=MNZ37 na latest Scaffold Major Full 2013-06-18 ASM41175v1 University of Mississippi medical center GCA_000411755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/755/GCF_000411755.1_ASM41175v1/ na na na haploid bacteria 1946918 1946911 40.000000 0 66 67 NCBI RefSeq GCF_000411755.1-RS_2024_11_05 2024-11-05 1996 1802 36 23887920 GCF_000411795.1 PRJNA224116 SAMN02415251 AFYW00000000.1 na 1072569 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. GZ9A00052 strain=GZ9A00052 na latest Contig Major Full 2013-06-17 ASM41179v1 State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention GCA_000411795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/795/GCF_000411795.1_ASM41179v1/ na na na haploid bacteria 4553509 4553509 52.000000 0 30 30 NCBI RefSeq GCF_000411795.1-RS_2025_05_18 2025-05-18 4485 4116 80 23028950 GCF_000411815.1 PRJNA224116 SAMN02415252 AFYX00000000.1 na 1072568 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. GXS2268 strain=GXS2268 na latest Contig Major Full 2013-06-17 ASM41181v1 State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention GCA_000411815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/815/GCF_000411815.1_ASM41181v1/ na na na haploid bacteria 4517278 4517278 52.000000 0 25 25 NCBI RefSeq GCF_000411815.1-RS_2025_05_17 2025-05-17 4441 4018 86 23028950 GCF_000411835.1 PRJNA224116 SAMN02415253 AFYY00000000.1 na 1072570 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. JX05-19 strain=JX05-19 na latest Contig Major Full 2013-06-17 ASM41183v1 State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention GCA_000411835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/835/GCF_000411835.1_ASM41183v1/ na na na haploid bacteria 4552262 4552262 52.000000 0 27 27 NCBI RefSeq GCF_000411835.1-RS_2025_05_18 2025-05-18 4493 4113 90 23028950 GCF_000411855.1 PRJNA224116 SAMN02415254 AFYZ00000000.1 na 1072571 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. YN09620 strain=YN09620 na latest Contig Major Full 2013-06-17 ASM41185v1 State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention GCA_000411855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/855/GCF_000411855.1_ASM41185v1/ na na na haploid bacteria 4486892 4486892 52.000000 0 24 24 NCBI RefSeq GCF_000411855.1-RS_2025_05_18 2025-05-18 4394 4027 82 23028950 GCF_000411875.1 PRJNA224116 SAMN02415255 AFZA00000000.1 na 1072572 28901 Salmonella enterica subsp. enterica serovar Paratyphi A str. ZJ98-53 strain=ZJ98-53 na latest Contig Major Full 2013-06-17 ASM41187v1 State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention GCA_000411875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/875/GCF_000411875.1_ASM41187v1/ na na na haploid bacteria 4516282 4516282 52.000000 0 24 24 NCBI RefSeq GCF_000411875.1-RS_2025_05_18 2025-05-18 4424 4014 87 23028950 GCF_000411975.1 PRJNA224116 SAMN02205103 ASXG00000000.1 na 1337957 31958 Amycolatopsis orientalis DSM 43388 strain=DSM 43388 na latest Contig Major Full 2013-06-17 AO43388_01 KRIBB GCA_000411975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/411/975/GCF_000411975.1_AO43388_01/ na na na haploid bacteria 8920384 8920384 70.000000 0 197 197 NCBI RefSeq GCF_000411975.1-RS_2025_08_14 2025-08-14 8522 8333 76 23908288 GCF_000412015.1 PRJNA224116 SAMN02470559 ARNY00000000.1 na 1298927 747 Pasteurella multocida P1933 strain=P1933 na latest Contig Major Full 2013-06-18 P1933 Moredun Research Institute GCA_000412015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/015/GCF_000412015.1_P1933/ na na na haploid bacteria 2441686 2441686 40.500000 0 269 269 NCBI RefSeq GCF_000412015.1-RS_2026_01_30 2026-01-30 2491 2399 32 na GCF_000412035.1 PRJNA224116 SAMN02470558 ARNW00000000.1 na 1298925 747 Pasteurella multocida 2000 strain=2000 na latest Contig Major Full 2013-06-18 ASM41203v1 Moredun Research Institute GCA_000412035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/035/GCF_000412035.1_ASM41203v1/ na na na haploid bacteria 2210534 2210534 40.500000 0 261 261 NCBI RefSeq GCF_000412035.1-RS_2026_01_30 2026-01-30 2182 2084 28 na GCF_000412075.1 PRJNA224116 SAMN02470557 ARWR00000000.1 na 1290393 747 Pasteurella multocida 671/90 strain=671/90 na latest Contig Major Full 2013-06-18 Pmultocida_hybrid671-90 Moredun Research Institute GCA_000412075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/075/GCF_000412075.1_Pmultocida_hybrid671-90/ na na na haploid bacteria 2245203 2245203 40.000000 0 21 21 NCBI RefSeq GCF_000412075.1-RS_2026_03_28 2026-03-28 2109 2030 56 24092794 GCF_000412105.1 PRJNA224116 SAMN02470562 ARNZ00000000.1 na 1298928 747 Pasteurella multocida RIIF strain=RIIF na latest Contig Major Full 2013-06-18 RIIF Moredun Research Institute GCA_000412105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/105/GCF_000412105.1_RIIF/ na na na haploid bacteria 2195634 2195634 40.500000 0 243 243 NCBI RefSeq GCF_000412105.1-RS_2026_01_30 2026-01-30 2145 2077 27 na GCF_000412125.1 PRJNA224116 SAMN02470560 AROA00000000.1 na 1298929 747 Pasteurella multocida 1500C strain=1500C na latest Contig Major Full 2013-06-18 1500C Moredun Research Institute GCA_000412125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/125/GCF_000412125.1_1500C/ na na na haploid bacteria 2274086 2274086 40.500000 0 350 350 NCBI RefSeq GCF_000412125.1-RS_2026_01_30 2026-01-30 2247 2142 33 na GCF_000412165.1 PRJNA224116 SAMN02472030 APWT00000000.1 na 1262350 317 Pseudomonas syringae pv. syringae SM strain=SM na latest Chromosome Major Full 2013-06-21 PSSSMv1.0 Institute of Plant Biology, University of Zurich GCA_000412165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/165/GCF_000412165.1_PSSSMv1.0/ na na na haploid bacteria 6124102 6094398 59.000000 2 2 26 NCBI RefSeq GCF_000412165.1-RS_2026_01_13 2026-01-13 5411 5170 84 23950121 GCF_000412185.1 PRJNA224116 SAMN02053529 ASJA00000000.1 reference genome 1161401 1161401 Euryhalocaulis caribicus strain=JL2009 na latest Contig Major Full 2013-06-18 jl2009 Xiamen University GCA_000412185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/185/GCF_000412185.1_jl2009/ na assembly from type material na haploid bacteria 3323095 3323095 64.000000 0 39 39 NCBI RefSeq GCF_000412185.1-RS_2026_04_04 2026-04-04 3303 3226 51 23929464 GCF_000412205.1 PRJNA224116 SAMN02604115 na na 1327988 1590 Lactiplantibacillus plantarum 16 strain=16 na latest Complete Genome Major Full 2013-06-18 ASM41220v1 University College Cork GCA_000412205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/205/GCF_000412205.1_ASM41220v1/ na na na haploid bacteria 3361015 3361015 44.500000 11 11 11 NCBI RefSeq GCF_000412205.1-RS_2025_12_27 2025-12-27 3214 3057 88 23908281 GCF_000412265.2 PRJNA224116 SAMN02471086 na na 465541 465541 Streptomyces sp. Mg1 strain=Mg1 na latest Complete Genome Major Full 2015-06-09 ASM41226v2 Texas A&M University GCA_000412265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/265/GCF_000412265.2_ASM41226v2/ na na na haploid bacteria 8716193 8716193 72.000000 4 4 4 NCBI RefSeq GCF_000412265.2-RS_2025_08_25 2025-08-25 7834 7502 95 23908282 GCF_000412295.1 PRJNA224116 SAMN02142558 ASQT00000000.1 na 1333541 287 Pseudomonas aeruginosa str. C 1334 strain=C 1334 na latest Contig Major Full 2013-06-19 C 1334 University of Strathclyde GCA_000412295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/295/GCF_000412295.1_C_1334/ na na na haploid bacteria 6302567 6302567 66.500000 0 669 669 NCBI RefSeq GCF_000412295.1-RS_2025_04_15 2025-04-15 6290 5954 39 24167005 GCF_000412335.2 PRJNA224116 SAMN02436914 ATDT00000000.1 na 566551 158484 Cedecea davisae DSM 4568 strain=DSM 4568 na latest Scaffold Minor Full 2013-06-19 ASM41233v2 WUGSC GCA_000412335.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/335/GCF_000412335.2_ASM41233v2/ na assembly from type material na haploid bacteria 4886981 4852684 54.500000 0 3 44 NCBI RefSeq GCF_000412335.2-RS_2026_04_26 2026-04-26 4535 4413 80 na GCF_000412355.1 PRJNA224116 SAMN02142557 ASQS00000000.1 na 1333540 287 Pseudomonas aeruginosa str. C 763 strain=C 763 na latest Contig Major Full 2013-06-19 C 763 University of Strathclyde GCA_000412355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/355/GCF_000412355.1_C_763/ na na na haploid bacteria 6977933 6977933 66.000000 0 844 844 NCBI RefSeq GCF_000412355.1-RS_2026_03_21 2026-03-21 7072 6674 47 24167005 GCF_000412395.1 PRJNA224116 SAMN02142567 ASQV00000000.1 na 1333550 287 Pseudomonas aeruginosa str. E2UoS strain=E 2 na latest Contig Major Full 2013-06-19 E 2 University of Strathclyde GCA_000412395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/395/GCF_000412395.1_E_2/ na na na haploid bacteria 6634585 6634585 66.000000 0 341 341 NCBI RefSeq GCF_000412395.1-RS_2025_02_25 2025-02-25 6409 6204 42 24167005 GCF_000412415.1 PRJNA224116 SAMN02142568 ASQW00000000.1 na 1333551 287 Pseudomonas aeruginosa str. PA 62 strain=PA 62 na latest Contig Major Full 2013-06-19 PA 62 University of Strathclyde GCA_000412415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/415/GCF_000412415.1_PA_62/ na na na haploid bacteria 6393253 6393253 66.500000 0 648 648 NCBI RefSeq GCF_000412415.1-RS_2025_05_20 2025-05-20 6427 6098 44 24167005 GCF_000412435.1 PRJNA224116 SAMN02142566 ASQX00000000.1 na 1333549 287 Pseudomonas aeruginosa str. MSH 10 strain=MSH 10 na latest Contig Major Full 2013-06-19 MSH 10 University of Strathclyde GCA_000412435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/435/GCF_000412435.1_MSH_10/ na na na haploid bacteria 6346940 6346940 66.500000 0 943 943 NCBI RefSeq GCF_000412435.1-RS_2025_05_20 2025-05-20 6592 6081 42 24167005 GCF_000412455.1 PRJNA224116 SAMN02142563 ASQY00000000.1 na 1333546 287 Pseudomonas aeruginosa str. PA 17 strain=PA 17 na latest Contig Major Full 2013-06-19 PA 17 University of Strathclyde GCA_000412455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/455/GCF_000412455.1_PA_17/ na na na haploid bacteria 6222894 6222894 66.500000 0 1245 1245 NCBI RefSeq GCF_000412455.1-RS_2025_04_15 2025-04-15 6689 6117 42 24167005 GCF_000412495.1 PRJNA224116 SAMN02142564 ASRA00000000.1 na 1333547 287 Pseudomonas aeruginosa str. PA 17SCV strain=PA 17(small_colony_variant) na latest Contig Major Full 2013-06-19 PA 17 SmallColonyVariant University of Strathclyde GCA_000412495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/495/GCF_000412495.1_PA_17_SmallColonyVariant/ na na na haploid bacteria 6178008 6178008 66.500000 0 1853 1853 NCBI RefSeq GCF_000412495.1-RS_2025_04_15 2025-04-15 7082 6251 41 24167005 GCF_000412555.1 PRJNA224116 SAMN02142559 ASRD00000000.1 na 1333542 287 Pseudomonas aeruginosa str. C 1426 strain=C 1426 na latest Contig Major Full 2013-06-19 C 1426 University of Strathclyde GCA_000412555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/555/GCF_000412555.1_C_1426/ na na na haploid bacteria 6397762 6397762 66.500000 0 421 421 NCBI RefSeq GCF_000412555.1-RS_2025_05_20 2025-05-20 6270 6050 45 24167005 GCF_000412595.1 PRJNA224116 SAMN02471935 ASZQ00000000.1 na 482300 1126 Microcystis aeruginosa SPC777 strain=SPC777 na latest Contig Major Full 2013-06-19 spc777-v1 University of Sao Paulo GCA_000412595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/595/GCF_000412595.1_spc777-v1/ na na na haploid bacteria 5454996 5454996 42.500000 0 278 278 NCBI RefSeq GCF_000412595.1-RS_2026_01_07 2026-01-07 5449 4940 54 23908289 GCF_000412635.1 PRJNA224116 SAMN02470046 ASTG00000000.1 reference genome 1335760 1335760 Sphingobium bisphenolivorans strain=YL23 na latest Contig Major Full 2013-06-20 Sphingobium sp. strain YL23 Institute of Urban Environment GCA_000412635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/635/GCF_000412635.1_Sphingobium_sp._strain_YL23/ na assembly from type material na haploid bacteria 3800099 3800099 63.500000 0 67 67 NCBI RefSeq GCF_000412635.1-RS_2026_03_28 2026-03-28 3805 3708 47 23908290 GCF_000412675.1 PRJNA224116 SAMD00061028 na reference genome 1211579 303 Pseudomonas putida NBRC 14164 strain=NBRC 14164 na latest Complete Genome Major Full 2013-06-14 ASM41267v1 National Institute of Technology and Evaluation GCA_000412675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/675/GCF_000412675.1_ASM41267v1/ na assembly from type material na haploid bacteria 6156701 6156701 62.500000 1 1 1 NCBI RefSeq GCF_000412675.1-RS_2025_12_11 2025-12-11 5572 5377 101 24526630 GCF_000412695.1 PRJNA224116 SAMD00061053 na na 1245471 53412 Metapseudomonas resinovorans NBRC 106553 strain=NBRC 106553 na latest Complete Genome Major Full 2013-06-14 ASM41269v1 National Institute of Technology and Evaluation GCA_000412695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/695/GCF_000412695.1_ASM41269v1/ na na na haploid bacteria 6484828 6484828 65.500000 2 2 2 NCBI RefSeq GCF_000412695.1-RS_2026_02_19 2026-02-19 5921 5765 93 23887915 GCF_000412715.2 PRJNA224116 SAMN02472181 na na 1330531 70775 Pseudomonas plecoglossicida NB2011 strain=NB2011 na latest Complete Genome Major Full 2025-04-22 ASM41271v2 Zhejiang Wanli University GCA_000412715.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/715/GCF_000412715.2_ASM41271v2/ na na na haploid bacteria 5455290 5455290 63.000000 1 1 1 NCBI RefSeq GCF_000412715.2-RS_2025_04_23 2025-04-23 5050 4755 98 23929479 GCF_000412775.1 PRJNA224116 SAMN02603909 na na 1323661 1280 Staphylococcus aureus CA-347 strain=CA-347 na latest Complete Genome Major Full 2013-06-20 ASM41277v1 TGen North GCA_000412775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/775/GCF_000412775.1_ASM41277v1/ na na na haploid bacteria 2875156 2875156 33.000000 2 2 2 NCBI RefSeq GCF_000412775.1-RS_2025_02_14 2025-02-14 2883 2711 79 23887918 GCF_000412795.1 PRJNA224116 SAMN02415215 ARYX00000000.1 na 1328334 28901 Salmonella enterica subsp. enterica serovar Muenchen str. 08-1125 strain=08-1125 na latest Contig Major Full 2013-06-20 08-1125_Ver1 Centers for Disease Control & Prevention GCA_000412795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/795/GCF_000412795.1_08-1125_Ver1/ na na na haploid bacteria 5076500 5076500 52.000000 0 113 113 NCBI RefSeq GCF_000412795.1-RS_2025_01_06 2025-01-06 5080 4770 89 na GCF_000412815.1 PRJNA224116 SAMN02415214 ARYW00000000.1 na 1328333 28901 Salmonella enterica subsp. enterica serovar Muenchen str. 2009K-0951 strain=2009K-0951 na latest Contig Major Full 2013-06-20 2009K-0951_Ver1 Centers for Disease Control & Prevention GCA_000412815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/815/GCF_000412815.1_2009K-0951_Ver1/ na na na haploid bacteria 5191490 5191490 52.000000 0 143 143 NCBI RefSeq GCF_000412815.1-RS_2025_01_06 2025-01-06 5295 4938 92 na GCF_000412835.1 PRJNA224116 SAMN02415213 ARYV00000000.1 na 1328332 28901 Salmonella enterica subsp. enterica serovar Stanley str. 06-0538 strain=06-0538 na latest Contig Major Full 2013-06-20 06-0538_Ver1 Centers for Disease Control & Prevention GCA_000412835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/835/GCF_000412835.1_06-0538_Ver1/ na na na haploid bacteria 4721547 4721547 52.000000 0 66 66 NCBI RefSeq GCF_000412835.1-RS_2025_01_06 2025-01-06 4647 4378 96 na GCF_000412855.1 PRJNA224116 SAMN02415212 ARYU00000000.1 na 1328331 28901 Salmonella enterica subsp. enterica serovar Poona str. 2010K-2244 strain=2010K-2244 na latest Contig Major Full 2013-06-20 2010K-2244_Ver1 Centers for Disease Control & Prevention GCA_000412855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/855/GCF_000412855.1_2010K-2244_Ver1/ na na na haploid bacteria 4638944 4638944 52.000000 0 88 88 NCBI RefSeq GCF_000412855.1-RS_2025_01_06 2025-01-06 4555 4285 93 na GCF_000412875.1 PRJNA224116 SAMN02415207 ARYP00000000.1 na 1328326 28901 Salmonella enterica subsp. enterica serovar Anatum str. 06-0532 strain=06-0532 na latest Contig Major Full 2013-06-20 06-0532Ver1 Centers for Disease Control & Prevention GCA_000412875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/875/GCF_000412875.1_06-0532Ver1/ na na na haploid bacteria 4616738 4616738 52.000000 0 43 43 NCBI RefSeq GCF_000412875.1-RS_2025_01_06 2025-01-06 4510 4262 84 na GCF_000412895.1 PRJNA224116 SAMN02415208 ARYQ00000000.1 na 1328327 28901 Salmonella enterica subsp. enterica serovar Bareilly str. 07-0873 strain=07-0873 na latest Contig Major Full 2013-06-20 07-0873_Ver1 Centers for Disease Control & Prevention GCA_000412895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/895/GCF_000412895.1_07-0873_Ver1/ na na na haploid bacteria 4772010 4772010 52.000000 0 87 87 NCBI RefSeq GCF_000412895.1-RS_2025_01_06 2025-01-06 4726 4393 98 na GCF_000412915.1 PRJNA224116 SAMN02415209 ARYR00000000.1 na 1328328 28901 Salmonella enterica subsp. enterica serovar Hadar str. 2012K-0272 strain=2012K-0272 na latest Contig Major Full 2013-06-20 2012K-0266_Ver1 Centers for Disease Control & Prevention GCA_000412915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/915/GCF_000412915.1_2012K-0266_Ver1/ na na na haploid bacteria 4680007 4680007 52.000000 0 85 85 NCBI RefSeq GCF_000412915.1-RS_2025_01_06 2025-01-06 4576 4296 94 na GCF_000412935.1 PRJNA224116 SAMN02415210 ARYS00000000.1 na 1328329 28901 Salmonella enterica subsp. enterica serovar Hartford str. 2012K-0272 strain=2012K-0272 na latest Contig Major Full 2013-06-20 2012K-0273_Ver1 Centers for Disease Control & Prevention GCA_000412935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/935/GCF_000412935.1_2012K-0273_Ver1/ na na na haploid bacteria 4855793 4855793 52.000000 0 117 117 NCBI RefSeq GCF_000412935.1-RS_2025_01_06 2025-01-06 4838 4535 94 na GCF_000412955.1 PRJNA224116 SAMN02471900 ASJF00000000.1 na 1315311 1313 Streptococcus pneumoniae MNZ85 strain=MNZ85 na latest Scaffold Major Full 2013-06-24 ASM41295v1 University of Mississippi medical center GCA_000412955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/955/GCF_000412955.1_ASM41295v1/ na na na haploid bacteria 2146862 2146742 39.500000 0 97 100 NCBI RefSeq GCF_000412955.1-RS_2025_07_08 2025-07-08 2194 1967 21 23887920 GCF_000412975.1 PRJNA224116 SAMN02596801 AHCP00000000.1 na 1053169 1396 Bacillus cereus BAG1O-3 strain=BAG1O-3 na latest Scaffold Major Full 2013-06-21 Baci_cere_BAG1O-3_G13160_V1 Broad Institute GCA_000412975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/975/GCF_000412975.1_Baci_cere_BAG1O-3_G13160_V1/ na na na haploid bacteria 5851194 5828199 35.000000 0 9 55 NCBI RefSeq GCF_000412975.1-RS_2026_01_13 2026-01-13 5939 5699 81 na GCF_000412995.1 PRJNA224116 SAMN02596984 ATFC00000000.1 reference genome 1125702 69710 Treponema vincentii F0403 strain=F0403 na latest Scaffold Major Full 2013-06-21 Trep_vinc_F0403_V1 Broad Institute GCA_000412995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/412/995/GCF_000412995.1_Trep_vinc_F0403_V1/ na na na haploid bacteria 2693493 2678100 45.500000 0 3 13 NCBI RefSeq GCF_000412995.1-RS_2026_04_26 2026-04-26 2488 2402 58 na GCF_000413035.1 PRJNA224116 SAMN02596986 ATFE00000000.1 na 1125700 58231 Treponema medium ATCC 700293 strain=ATCC 700293 na latest Scaffold Major Full 2013-06-21 Trep_medi_ATCC_700293_V1 Broad Institute GCA_000413035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/035/GCF_000413035.1_Trep_medi_ATCC_700293_V1/ na assembly from type material na haploid bacteria 2727508 2715791 44.500000 0 1 19 NCBI RefSeq GCF_000413035.1-RS_2026_03_30 2026-03-30 2385 2291 56 na GCF_000413055.1 PRJNA224116 SAMN02596987 ATFF00000000.1 reference genome 1125699 51160 Treponema maltophilum ATCC 51939 strain=ATCC 51939 na latest Scaffold Major Full 2013-06-21 Trep_malt_ATCC_51939_V1 Broad Institute GCA_000413055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/055/GCF_000413055.1_Trep_malt_ATCC_51939_V1/ na assembly from type material na haploid bacteria 2530388 2527074 48.000000 0 1 6 NCBI RefSeq GCF_000413055.1-RS_2026_05_02 2026-05-02 2336 2259 55 na GCF_000413075.1 PRJNA224116 SAMN02596781 AHAD00000000.1 na 999439 158 Treponema denticola SP44 strain=SP44 na latest Scaffold Major Full 2013-06-21 Trep_dent_SP44__F0466_V1 Broad Institute GCA_000413075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/075/GCF_000413075.1_Trep_dent_SP44_F0466_V1/ na na na haploid bacteria 2824736 2813914 38.000000 0 8 17 NCBI RefSeq GCF_000413075.1-RS_2025_07_04 2025-07-04 2656 2565 53 na GCF_000413095.1 PRJNA224116 SAMN02596780 AHAC00000000.1 na 999436 158 Treponema denticola SP32 strain=SP32 na latest Scaffold Major Full 2013-06-21 Trep_dent_SP32__F0464_V1 Broad Institute GCA_000413095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/095/GCF_000413095.1_Trep_dent_SP32_F0464_V1/ na na na haploid bacteria 2990277 2962533 38.000000 0 6 32 NCBI RefSeq GCF_000413095.1-RS_2025_07_04 2025-07-04 2842 2741 53 na GCF_000413115.1 PRJNA224116 SAMN02596779 AHAB00000000.1 na 999435 158 Treponema denticola SP23 strain=SP23 na latest Scaffold Major Full 2013-06-21 Trep_dent_SP23__F0463_V1 Broad Institute GCA_000413115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/115/GCF_000413115.1_Trep_dent_SP23_F0463_V1/ na na na haploid bacteria 2825999 2818666 38.000000 0 3 12 NCBI RefSeq GCF_000413115.1-RS_2025_07_04 2025-07-04 2666 2580 53 na GCF_000413135.1 PRJNA224116 SAMN02470583 ASZP00000000.2 na 1331042 747 Pasteurella multocida subsp. multocida P1062 strain=P1062 na latest Chromosome Major Full 2013-11-16 P1062v2 University of Idaho GCA_000413135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/135/GCF_000413135.1_P1062v2/ na na na haploid bacteria 2699012 2509028 40.500000 1 1 5 NCBI RefSeq GCF_000413135.1-RS_2025_12_30 2025-12-30 2467 2338 77 26494687 GCF_000413175.2 PRJNA224116 SAMN01780123 APUH00000000.1 na 1145173 487 Neisseria meningitidis 2001068 strain=2001068 na latest Contig Major Full 2013-06-21 ASM41317v2 IGS GCA_000413175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/175/GCF_000413175.2_ASM41317v2/ na na na haploid bacteria 2209202 2209202 52.000000 0 135 135 NCBI RefSeq GCF_000413175.2-RS_2026_01_07 2026-01-07 2277 2028 76 na GCF_000413195.2 PRJNA224116 SAMN01780126 APUK00000000.1 na 1145176 487 Neisseria meningitidis 2007461 strain=2007461 na latest Contig Major Full 2013-06-21 ASM41319v2 IGS GCA_000413195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/195/GCF_000413195.2_ASM41319v2/ na na na haploid bacteria 2198865 2198865 52.000000 0 146 146 NCBI RefSeq GCF_000413195.2-RS_2026_01_12 2026-01-12 2249 1991 77 na GCF_000413215.2 PRJNA224116 SAMN01780127 APUL00000000.1 na 1145177 487 Neisseria meningitidis NM134 strain=NM134 na latest Contig Major Full 2013-06-21 ASM41321v2 IGS GCA_000413215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/215/GCF_000413215.2_ASM41321v2/ na na na haploid bacteria 2188007 2188007 51.500000 0 131 131 NCBI RefSeq GCF_000413215.2-RS_2026_01_04 2026-01-04 2278 2013 77 na GCF_000413235.2 PRJNA224116 SAMN01780128 APUM00000000.1 na 1145178 487 Neisseria meningitidis 98002 strain=98002 na latest Contig Major Full 2013-06-21 ASM41323v2 IGS GCA_000413235.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/235/GCF_000413235.2_ASM41323v2/ na na na haploid bacteria 2197910 2197910 52.000000 0 142 142 NCBI RefSeq GCF_000413235.2-RS_2025_08_05 2025-08-05 2311 2032 87 na GCF_000413315.1 PRJNA224116 SAMN02596989 ATFL00000000.1 na 1203605 671222 Propionibacterium sp. oral taxon 192 str. F0372 strain=F0372 na latest Scaffold Major Full 2013-06-21 Prop_sp_oral_taxon_192_F0372_V1 Broad Institute GCA_000413315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/315/GCF_000413315.1_Prop_sp_oral_taxon_192_F0372_V1/ na na na haploid bacteria 2711056 2704051 61.500000 0 2 15 NCBI RefSeq GCF_000413315.1-RS_2025_08_25 2025-08-25 2556 2469 61 na GCF_000413355.1 PRJNA224116 SAMN02596991 ATFN00000000.1 na 1203550 28134 Hoylesella oralis HGA0225 strain=HGA0225 na latest Scaffold Major Full 2013-06-21 Prev_oral_HGA0225_V1 Broad Institute GCA_000413355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/355/GCF_000413355.1_Prev_oral_HGA0225_V1/ na na na haploid bacteria 2857367 2849142 44.500000 0 7 21 NCBI RefSeq GCF_000413355.1-RS_2025_09_13 2025-09-13 2333 2227 66 na GCF_000413375.1 PRJNA224116 SAMN02596992 ATFO00000000.1 na 1203568 1203568 Dermabacter sp. HFH0086 strain=HFH0086 na latest Scaffold Major Full 2013-06-21 Derm_sp_HFH0086_V1 Broad Institute GCA_000413375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/375/GCF_000413375.1_Derm_sp_HFH0086_V1/ na na na haploid bacteria 2377736 2361288 63.000000 0 1 8 NCBI RefSeq GCF_000413375.1-RS_2024_08_13 2024-08-13 2167 2083 59 na GCF_000413395.1 PRJNA224116 SAMN02596993 ATFP00000000.1 na 1073351 46506 Bacteroides stercoris CC31F strain=CC31F na latest Scaffold Major Full 2013-06-21 Bact_ster_CC31F_V1 Broad Institute GCA_000413395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/395/GCF_000413395.1_Bact_ster_CC31F_V1/ na na na haploid bacteria 4102660 4028417 46.000000 0 10 57 NCBI RefSeq GCF_000413395.1-RS_2025_12_02 2025-12-02 3454 3306 64 na GCF_000413415.1 PRJNA224116 SAMN02596777 AGZL00000000.1 na 883151 76832 Myroides odoratimimus CCUG 12700 strain=CCUG 12700 na latest Scaffold Major Full 2013-06-21 Myro_odor_CCUG_12700_V1 Broad Institute GCA_000413415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/415/GCF_000413415.1_Myro_odor_CCUG_12700_V1/ na na na haploid bacteria 4040949 3985124 34.000000 0 7 44 NCBI RefSeq GCF_000413415.1-RS_2025_12_04 2025-12-04 3592 3462 103 na GCF_000413435.1 PRJNA224116 SAMN02596755 AGYD00000000.1 na 883165 827 Campylobacter ureolyticus ACS-301-V-Sch3b strain=ACS-301-V-Sch3b na latest Scaffold Major Full 2013-06-21 Camp_ureo_ACS-301-V-SCH3B_V1 Broad Institute GCA_000413435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/435/GCF_000413435.1_Camp_ureo_ACS-301-V-SCH3B_V1/ na na na haploid bacteria 1698455 1691524 29.500000 0 7 19 NCBI RefSeq GCF_000413435.1-RS_2026_02_08 2026-02-08 1771 1706 52 na GCF_000413455.1 PRJNA224116 SAMN02596775 AGZC00000000.1 na 883110 178214 Facklamia hominis ACS-120-V-Sch10 strain=ACS-120-V-Sch10 na latest Scaffold Major Full 2013-06-21 Fack_homi_ACS-120-V-SCH10_V1 Broad Institute GCA_000413455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/455/GCF_000413455.1_Fack_homi_ACS-120-V-SCH10_V1/ na na na haploid bacteria 1951072 1918533 38.500000 0 4 27 NCBI RefSeq GCF_000413455.1-RS_2026_02_08 2026-02-08 1826 1745 53 na GCF_000413475.1 PRJNA224116 SAMN02596988 ATFK00000000.1 na 1095731 1338 Streptococcus intermedius SK54 = ATCC 27335 strain=ATCC 27335 na latest Contig Major Full 2013-06-21 Stre_inte_ATCC_27335_V1 Broad Institute GCA_000413475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/475/GCF_000413475.1_Stre_inte_ATCC_27335_V1/ na assembly from type material na haploid bacteria 1951449 1951449 37.500000 0 10 10 NCBI RefSeq GCF_000413475.1-RS_2026_04_14 2026-04-14 1953 1808 76 na GCF_000413495.1 PRJNA224116 SAMN02092503 ATHF00000000.1 na 1328340 235 Brucella abortus 76-1413 strain=76-1413 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_76-1413_V1 Broad Institute GCA_000413495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/495/GCF_000413495.1_Bruc_abor_biovar_1_76-1413_V1/ na na na haploid bacteria 3286423 3286423 57.000000 0 4 4 NCBI RefSeq GCF_000413495.1-RS_2026_01_27 2026-01-27 3232 2986 68 na GCF_000413515.1 PRJNA224116 SAMN01921145 ATHH00000000.1 na 1293912 236 Brucella ovis IntaBari-2009-88-3 strain=IntaBari-2009-88-3 na latest Contig Major Full 2013-06-21 Bruc_ovis_IntaBari-2009-88-3_V1 Broad Institute GCA_000413515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/515/GCF_000413515.1_Bruc_ovis_IntaBari-2009-88-3_V1/ na na na haploid bacteria 3233955 3233955 57.000000 0 107 107 NCBI RefSeq GCF_000413515.1-RS_2026_05_13 2026-05-13 3223 2825 55 na GCF_000413535.1 PRJNA224116 SAMN02092502 ATHG00000000.1 na 1328339 235 Brucella abortus 68-3396P strain=68-3396P 4 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_4_68-3396P_V1 Broad Institute GCA_000413535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/535/GCF_000413535.1_Bruc_abor_biovar_4_68-3396P_V1/ na na na haploid bacteria 3286104 3286104 57.000000 0 4 4 NCBI RefSeq GCF_000413535.1-RS_2026_01_27 2026-01-27 3232 2990 68 na GCF_000413555.1 PRJNA224116 SAMN02092506 ATHC00000000.1 na 1328343 235 Brucella abortus 82-3893 strain=82-3893 2, atypical latest Contig Major Full 2013-06-21 Bruc_abor_biovar_2_82-3893_V1 Broad Institute GCA_000413555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/555/GCF_000413555.1_Bruc_abor_biovar_2_82-3893_V1/ na na na haploid bacteria 3286088 3286088 57.000000 0 4 4 NCBI RefSeq GCF_000413555.1-RS_2026_01_27 2026-01-27 3238 2993 68 na GCF_000413575.1 PRJNA224116 SAMN02092507 ATHB00000000.1 na 1328344 235 Brucella abortus 84-0928 strain=84-0928 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_84-0928_V1 Broad Institute GCA_000413575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/575/GCF_000413575.1_Bruc_abor_biovar_1_84-0928_V1/ na na na haploid bacteria 3286543 3286543 57.000000 0 4 4 NCBI RefSeq GCF_000413575.1-RS_2026_01_27 2026-01-27 3230 2982 68 na GCF_000413595.1 PRJNA224116 SAMN02092508 ATHA00000000.1 na 1328345 235 Brucella abortus 85-1058 strain=85-1058 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_85-1058_V1 Broad Institute GCA_000413595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/595/GCF_000413595.1_Bruc_abor_biovar_1_85-1058_V1/ na na na haploid bacteria 3286425 3286425 57.000000 0 4 4 NCBI RefSeq GCF_000413595.1-RS_2026_01_27 2026-01-27 3229 2982 68 na GCF_000413615.1 PRJNA224116 SAMN02092509 ATGZ00000000.1 na 1328346 235 Brucella abortus 87-0095 strain=87-0095 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_87-0095_V1 Broad Institute GCA_000413615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/615/GCF_000413615.1_Bruc_abor_biovar_1_87-0095_V1/ na na na haploid bacteria 3286575 3286575 57.000000 0 4 4 NCBI RefSeq GCF_000413615.1-RS_2026_01_27 2026-01-27 3232 2993 68 na GCF_000413635.1 PRJNA224116 SAMN02092512 ATGW00000000.1 na 1328349 235 Brucella abortus 90-0962 strain=90-0962 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_90-0962_V1 Broad Institute GCA_000413635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/635/GCF_000413635.1_Bruc_abor_biovar_1_90-0962_V1/ na na na haploid bacteria 3285923 3285923 57.000000 0 4 4 NCBI RefSeq GCF_000413635.1-RS_2026_01_27 2026-01-27 3229 2985 68 na GCF_000413655.1 PRJNA224116 SAMN02092513 ATGV00000000.1 na 1328350 235 Brucella abortus 90-0742 strain=90-0742 1, atypical latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_90-0742_V1 Broad Institute GCA_000413655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/655/GCF_000413655.1_Bruc_abor_biovar_1_90-0742_V1/ na na na haploid bacteria 3283303 3283303 57.000000 0 5 5 NCBI RefSeq GCF_000413655.1-RS_2026_01_27 2026-01-27 3227 2982 68 na GCF_000413675.1 PRJNA224116 SAMN02092514 ATGU00000000.1 na 1328351 235 Brucella abortus 90-0775 strain=90-0775 4 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_4_90-0775_V1 Broad Institute GCA_000413675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/675/GCF_000413675.1_Bruc_abor_biovar_4_90-0775_V1/ na na na haploid bacteria 3285596 3285596 57.000000 0 4 4 NCBI RefSeq GCF_000413675.1-RS_2026_01_27 2026-01-27 3233 2991 68 na GCF_000413695.1 PRJNA224116 SAMN02092515 ATGT00000000.1 na 1328352 235 Brucella abortus 90-0737 strain=90-0737 2 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_2_90-0737_V1 Broad Institute GCA_000413695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/695/GCF_000413695.1_Bruc_abor_biovar_2_90-0737_V1/ na na na haploid bacteria 3286408 3286408 57.000000 0 4 4 NCBI RefSeq GCF_000413695.1-RS_2026_01_27 2026-01-27 3232 2987 68 na GCF_000413715.1 PRJNA224116 SAMN02092516 ATGS00000000.1 na 1328353 235 Brucella abortus 90-1280 strain=90-1280 2 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_2_90-1280_V1 Broad Institute GCA_000413715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/715/GCF_000413715.1_Bruc_abor_biovar_2_90-1280_V1/ na na na haploid bacteria 3285499 3285499 57.000000 0 4 4 NCBI RefSeq GCF_000413715.1-RS_2026_01_27 2026-01-27 3231 2987 68 na GCF_000413735.1 PRJNA224116 SAMN02092517 ATGR00000000.1 na 1328354 235 Brucella abortus 94-1313 strain=94-1313 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_94-1313_V1 Broad Institute GCA_000413735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/735/GCF_000413735.1_Bruc_abor_biovar_1_94-1313_V1/ na na na haploid bacteria 3285956 3285956 57.000000 0 5 5 NCBI RefSeq GCF_000413735.1-RS_2026_01_27 2026-01-27 3232 2985 68 na GCF_000413755.1 PRJNA224116 SAMN02092518 ATGQ00000000.1 na 1328355 235 Brucella abortus 01-0648 strain=01-0648 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_01-0648_V1 Broad Institute GCA_000413755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/755/GCF_000413755.1_Bruc_abor_biovar_1_01-0648_V1/ na na na haploid bacteria 3286959 3286959 57.000000 0 5 5 NCBI RefSeq GCF_000413755.1-RS_2026_01_27 2026-01-27 3231 2986 68 na GCF_000413775.1 PRJNA224116 SAMN02092519 ATGP00000000.1 na 1328356 235 Brucella abortus 01-0585 strain=01-0585 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_01-0585_V1 Broad Institute GCA_000413775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/775/GCF_000413775.1_Bruc_abor_biovar_1_01-0585_V1/ na na na haploid bacteria 3286218 3286218 57.000000 0 5 5 NCBI RefSeq GCF_000413775.1-RS_2026_01_27 2026-01-27 3230 2982 68 na GCF_000413795.1 PRJNA224116 SAMN02092520 ATGO00000000.1 na 1328357 235 Brucella abortus 01-0065 strain=01-0065 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_01-0065_V1 Broad Institute GCA_000413795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/795/GCF_000413795.1_Bruc_abor_biovar_1_01-0065_V1/ na na na haploid bacteria 3286740 3286740 57.000000 0 4 4 NCBI RefSeq GCF_000413795.1-RS_2026_01_27 2026-01-27 3233 2988 68 na GCF_000413815.1 PRJNA224116 SAMN02092521 ATGN00000000.1 na 1328358 235 Brucella abortus B10-0018 strain=B10-0018 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_B10-0018_V1 Broad Institute GCA_000413815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/815/GCF_000413815.1_Bruc_abor_biovar_1_B10-0018_V1/ na na na haploid bacteria 3286678 3286678 57.000000 0 4 4 NCBI RefSeq GCF_000413815.1-RS_2026_01_27 2026-01-27 3230 2989 68 na GCF_000413835.1 PRJNA224116 SAMN02092523 ATGL00000000.1 na 1328360 235 Brucella abortus B10-0973 strain=B10-0973 1 latest Contig Major Full 2013-06-21 Bruc_abor_biovar_1_B10-0973_V1 Broad Institute GCA_000413835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/835/GCF_000413835.1_Bruc_abor_biovar_1_B10-0973_V1/ na na na haploid bacteria 3286446 3286446 57.000000 0 4 4 NCBI RefSeq GCF_000413835.1-RS_2026_01_27 2026-01-27 3234 2989 68 na GCF_000413855.1 PRJNA224116 SAMN01087841 ATGG00000000.1 na 1217657 134534 Acinetobacter gyllenbergii CIP 110306 = MTCC 11365 strain=CIP 110306 na latest Contig Major Full 2013-06-21 Acin_gyll_CIP_110306_V1 Broad Institute GCA_000413855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/855/GCF_000413855.1_Acin_gyll_CIP_110306_V1/ na assembly from type material na haploid bacteria 4305849 4305849 41.000000 0 65 65 NCBI RefSeq GCF_000413855.1-RS_2026_01_27 2026-01-27 4203 4041 81 na GCF_000413875.1 PRJNA224116 SAMN01087855 ATGH00000000.1 na 1217660 756892 Acinetobacter indicus ANC 4215 strain=ANC 4215 na latest Scaffold Major Full 2013-06-21 Acin_indi_ANC_4215_V1 Broad Institute GCA_000413875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/875/GCF_000413875.1_Acin_indi_ANC_4215_V1/ na na na haploid bacteria 3186687 3171009 45.500000 0 11 33 NCBI RefSeq GCF_000413875.1-RS_2025_08_08 2025-08-08 3065 2864 93 na GCF_000413895.1 PRJNA224116 SAMN01087851 ATGI00000000.1 reference genome 421052 632955 Acinetobacter rudis CIP 110305 strain=CIP 110305 na latest Scaffold Major Full 2013-06-21 Acin_rudi_CIP_110305_V1 Broad Institute GCA_000413895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/895/GCF_000413895.1_Acin_rudi_CIP_110305_V1/ na assembly from type material na haploid bacteria 4066694 4005144 39.000000 0 11 48 NCBI RefSeq GCF_000413895.1-RS_2025_12_09 2025-12-09 3695 3535 87 na GCF_000413915.1 PRJNA224116 SAMN01828139 ATGJ00000000.1 na 1217634 470 Acinetobacter baumannii NIPH 410 strain=NIPH 410 na latest Scaffold Major Full 2013-06-21 Acin_baum_NIPH_410_V1 Broad Institute GCA_000413915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/915/GCF_000413915.1_Acin_baum_NIPH_410_V1/ na na na haploid bacteria 4047309 4031919 39.000000 0 15 26 NCBI RefSeq GCF_000413915.1-RS_2026_01_22 2026-01-22 4003 3694 85 na GCF_000413935.1 PRJNA224116 SAMN01087860 ATGK00000000.1 reference genome 280145 280145 Acinetobacter colistiniresistens strain=NIPH 2036 na latest Scaffold Major Full 2013-06-21 Acin_sp_NIPH_2036_V1 Broad Institute GCA_000413935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/935/GCF_000413935.1_Acin_sp_NIPH_2036_V1/ na assembly from type material na haploid bacteria 3897684 3884766 41.500000 0 11 21 NCBI RefSeq GCF_000413935.1-RS_2025_12_09 2025-12-09 3666 3477 81 na GCF_000413955.1 PRJNA224116 SAMN02092522 ATGM00000000.1 na 1328359 235 Brucella abortus B10-0091 strain=B10-0091 1 latest Scaffold Major Full 2013-06-21 Bruc_abor_biovar_1_B10-0091_V1 Broad Institute GCA_000413955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/955/GCF_000413955.1_Bruc_abor_biovar_1_B10-0091_V1/ na na na haploid bacteria 3286586 3286576 57.000000 0 4 5 NCBI RefSeq GCF_000413955.1-RS_2026_01_27 2026-01-27 3233 2982 68 na GCF_000413975.1 PRJNA224116 SAMN02092511 ATGX00000000.1 na 1328348 235 Brucella abortus 89-0363 strain=89-0363 1 latest Scaffold Major Full 2013-06-21 Bruc_abor_biovar_1_89-0363_V1 Broad Institute GCA_000413975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/975/GCF_000413975.1_Bruc_abor_biovar_1_89-0363_V1/ na na na haploid bacteria 3283679 3283669 57.000000 0 4 5 NCBI RefSeq GCF_000413975.1-RS_2026_01_27 2026-01-27 3227 2985 68 na GCF_000413995.1 PRJNA224116 SAMN02092510 ATGY00000000.1 na 1328347 235 Brucella abortus 87-2211 strain=87-2211 1 latest Scaffold Major Full 2013-06-21 Bruc_abor_biovar_1_87-2211_V1 Broad Institute GCA_000413995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/413/995/GCF_000413995.1_Bruc_abor_biovar_1_87-2211_V1/ na na na haploid bacteria 3287056 3287046 57.000000 0 4 5 NCBI RefSeq GCF_000413995.1-RS_2026_01_27 2026-01-27 3235 2993 68 na GCF_000414015.1 PRJNA224116 SAMN02092505 ATHD00000000.1 na 1328342 235 Brucella abortus 82-2330 strain=82-2330 1 latest Scaffold Major Full 2013-06-21 Bruc_abor_biovar_1_82-2330_V1 Broad Institute GCA_000414015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/015/GCF_000414015.1_Bruc_abor_biovar_1_82-2330_V1/ na na na haploid bacteria 3282039 3282029 57.000000 0 4 5 NCBI RefSeq GCF_000414015.1-RS_2026_01_27 2026-01-27 3227 2981 68 na GCF_000414035.1 PRJNA224116 SAMN02603771 na na 1340851 287 Pseudomonas aeruginosa RP73 strain=RP73 na latest Complete Genome Major Full 2013-06-24 ASM41403v1 San Raffaele Scientific Institute, Division of Immunology, Transplantation and Infectious Diseases, Milano, Italy GCA_000414035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/035/GCF_000414035.1_ASM41403v1/ na na na haploid bacteria 6342034 6342034 66.500000 1 1 1 NCBI RefSeq GCF_000414035.1-RS_2025_02_14 2025-02-14 5896 5744 79 23908295 GCF_000414055.1 PRJNA224116 SAMN02469989 ASQG00000000.1 na 1330038 106649 Acinetobacter guillouiae MSP4-18 strain=MSP4-18 na latest Contig Major Full 2013-06-24 Acinetobacter guillouiae Institute of Microbial Technology GCA_000414055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/055/GCF_000414055.1_Acinetobacter_guillouiae/ na na na haploid bacteria 4848959 4848959 38.000000 0 94 94 NCBI RefSeq GCF_000414055.1-RS_2026_06_25 2026-06-25 4642 4495 73 na GCF_000414075.1 PRJNA224116 SAMN02469997 ASQH00000000.1 na 1217657 134534 Acinetobacter gyllenbergii CIP 110306 = MTCC 11365 strain=MTCC 11365 na latest Contig Major Full 2013-06-24 Acinetobacter gyllenbergii Institute of Microbial Technology GCA_000414075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/075/GCF_000414075.1_Acinetobacter_gyllenbergii/ na assembly from type material na haploid bacteria 4318988 4318988 41.000000 0 48 48 NCBI RefSeq GCF_000414075.1-RS_2025_12_23 2025-12-23 4174 4030 71 na GCF_000414115.1 PRJNA224116 SAMN01893928 AOPZ00000000.1 na 1286094 47760 Streptomyces aurantiacus JA 4570 strain=JA 4570 na latest Contig Major Full 2013-06-24 STRAU University of Freiburg GCA_000414115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/115/GCF_000414115.1_STRAU/ na na na haploid bacteria 8762126 8762126 72.000000 0 568 568 NCBI RefSeq GCF_000414115.1-RS_2026_03_10 2026-03-10 7923 7440 70 na GCF_000414135.1 PRJNA224116 SAMN02469943 ASTK00000000.1 na 1333529 196 Campylobacter fetus subsp. venerealis bv. intermedius str. 99541 strain=99541 na latest Contig Major Full 2013-06-24 Cfvi99541 Facultad de Ciencias, UdelaR, Uruguay GCA_000414135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/135/GCF_000414135.1_Cfvi99541/ na na na haploid bacteria 1871719 1871719 33.000000 0 218 218 NCBI RefSeq GCF_000414135.1-RS_2026_03_28 2026-03-28 2050 1939 37 23908278 GCF_000414155.2 PRJNA224116 SAMN02470016 ASXQ00000000.1 na 1337997 562 Escherichia coli IMT8073 strain=IMT8073 na latest Contig Minor Full 2013-06-24 IMT8073_mix_1 Institute of Microbiology and Epizootics, Veterinary Faculty, Freie University Berlin GCA_000414155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/155/GCF_000414155.2_IMT8073_mix_1/ na na na haploid bacteria 5144397 5144397 50.500000 0 179 179 NCBI RefSeq GCF_000414155.2-RS_2025_06_09 2025-06-09 5267 4866 110 23908298 GCF_000414175.1 PRJNA224116 SAMD00036740 BARX00000000.1 na 1331007 182262 Agarivorans albus MKT 106 strain=MKT 106 na latest Contig Major Full 2013-06-12 ASM41417v1 National Research Institute of Fisheries Science, Fisheries Research Agency GCA_000414175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/175/GCF_000414175.1_ASM41417v1/ na assembly from type material na haploid bacteria 4734285 4734285 44.000000 0 67 67 NCBI RefSeq GCF_000414175.1-RS_2025_08_08 2025-08-08 4345 4222 71 23868120 GCF_000414195.2 PRJNA224116 SAMD00036741 BARY00000000.1 na 1241306 1241306 Exiguobacterium sp. OS-77 strain=OS-77 na latest Scaffold Major Full 2013-06-12 ASM41419v2 Kyushu University GCA_000414195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/195/GCF_000414195.2_ASM41419v2/ na na na haploid bacteria 3180445 3151479 47.000000 0 5 23 NCBI RefSeq GCF_000414195.2-RS_2024_08_15 2024-08-15 3269 3206 55 24414928 GCF_000414215.2 PRJNA224116 SAMN02604238 na na 1281781 28025 Bifidobacterium animalis subsp. lactis Bl12 strain=Bl12 na latest Complete Genome Major Full 2024-05-21 ASM41421v2 University of Parma GCA_000414215.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/215/GCF_000414215.2_ASM41421v2/ na na na haploid bacteria 1944036 1944036 60.500000 1 1 1 NCBI RefSeq GCF_000414215.2-RS_2026_05_24 2026-05-24 1625 1541 67 23645200 GCF_000414445.1 PRJNA224116 SAMN02436829 ATJF00000000.1 na 1261070 2702 Gardnerella vaginalis JCP8481B strain=JCP8481B na latest Scaffold Major Full 2013-06-26 ASM41444v1 Washington University GCA_000414445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/445/GCF_000414445.1_ASM41444v1/ na na na haploid bacteria 1573879 1569779 43.000000 0 139 180 NCBI RefSeq GCF_000414445.1-RS_2025_03_12 2025-03-12 1308 1202 51 na GCF_000414465.1 PRJNA224116 SAMN02436910 ATJG00000000.1 na 1261069 2702 Gardnerella vaginalis JCP8481A strain=JCP8481A na latest Scaffold Major Full 2013-06-26 ASM41446v1 Washington University GCA_000414465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/465/GCF_000414465.1_ASM41446v1/ na na na haploid bacteria 1572875 1567375 43.000000 0 149 204 NCBI RefSeq GCF_000414465.1-RS_2025_03_12 2025-03-12 1320 1199 50 na GCF_000414525.1 PRJNA224116 SAMN02436830 ATJJ00000000.1 na 1261066 2702 Gardnerella vaginalis JCP8108 strain=JCP8108 na latest Scaffold Major Full 2013-06-26 ASM41452v1 Washington University GCA_000414525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/525/GCF_000414525.1_ASM41452v1/ na na na haploid bacteria 1665594 1663094 41.000000 0 151 176 NCBI RefSeq GCF_000414525.1-RS_2025_03_12 2025-03-12 1452 1332 52 na GCF_000414585.1 PRJNA224116 SAMN02436773 ATJM00000000.1 na 1261063 2914924 Gardnerella pickettii JCP8017B strain=JCP8017B na latest Scaffold Major Full 2013-06-26 ASM41458v1 Washington University GCA_000414585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/585/GCF_000414585.1_ASM41458v1/ na na na haploid bacteria 1602251 1599351 42.000000 0 158 187 NCBI RefSeq GCF_000414585.1-RS_2025_08_05 2025-08-05 1412 1304 44 na GCF_000414605.1 PRJNA224116 SAMN02436912 ATJN00000000.1 na 1261062 2914924 Gardnerella pickettii JCP8017A strain=JCP8017A na latest Scaffold Major Full 2013-06-26 ASM41460v1 Washington University GCA_000414605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/605/GCF_000414605.1_ASM41460v1/ na na na haploid bacteria 1607921 1605521 42.000000 0 163 187 NCBI RefSeq GCF_000414605.1-RS_2025_08_05 2025-08-05 1429 1320 49 na GCF_000414625.1 PRJNA224116 SAMN02436711 ATJO00000000.1 na 1261061 2914924 Gardnerella pickettii JCP7719 strain=JCP7719 na latest Scaffold Major Full 2013-06-26 ASM41462v1 Washington University GCA_000414625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/625/GCF_000414625.1_ASM41462v1/ na na na haploid bacteria 1563149 1559149 42.000000 0 145 185 NCBI RefSeq GCF_000414625.1-RS_2026_01_30 2026-01-30 1379 1272 42 na GCF_000414645.1 PRJNA224116 SAMN02436831 ATJP00000000.1 na 1261060 2702 Gardnerella vaginalis JCP7672 strain=JCP7672 na latest Scaffold Major Full 2013-06-26 ASM41464v1 Washington University GCA_000414645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/645/GCF_000414645.1_ASM41464v1/ na na na haploid bacteria 1603533 1600533 41.000000 0 139 169 NCBI RefSeq GCF_000414645.1-RS_2026_01_30 2026-01-30 1342 1238 53 na GCF_000414665.1 PRJNA224116 SAMN02436712 ATJQ00000000.1 na 1261059 2914924 Gardnerella pickettii JCP7659 strain=JCP7659 na latest Scaffold Major Full 2013-06-26 ASM41466v1 Washington University GCA_000414665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/665/GCF_000414665.1_ASM41466v1/ na na na haploid bacteria 1535941 1532641 42.000000 0 181 214 NCBI RefSeq GCF_000414665.1-RS_2025_08_05 2025-08-05 1355 1247 44 na GCF_000414685.1 PRJNA224116 SAMN02436904 ATJR00000000.1 na 1261058 2702 Gardnerella vaginalis JCP7276 strain=JCP7276 na latest Scaffold Major Full 2013-06-26 ASM41468v1 Washington University GCA_000414685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/685/GCF_000414685.1_ASM41468v1/ na na na haploid bacteria 1659589 1656189 41.000000 0 145 179 NCBI RefSeq GCF_000414685.1-RS_2026_01_30 2026-01-30 1425 1324 53 na GCF_000414705.1 PRJNA224116 SAMN02436832 ATJS00000000.1 na 1261057 2702 Gardnerella vaginalis JCP7275 strain=JCP7275 na latest Scaffold Major Full 2013-06-26 ASM41470v1 Washington University GCA_000414705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/705/GCF_000414705.1_ASM41470v1/ na na na haploid bacteria 1562234 1560434 41.000000 0 184 202 NCBI RefSeq GCF_000414705.1-RS_2025_08_05 2025-08-05 1369 1254 43 na GCF_000414745.2 PRJNA224116 SAMN02415293 ATFR00000000.1 na 1192689 28901 Salmonella enterica subsp. enterica serovar Dublin str. DG22 strain=DG22 na latest Scaffold Minor Full 2013-06-26 ASM41474v2 The Genome Institute GCA_000414745.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/745/GCF_000414745.2_ASM41474v2/ na na na haploid bacteria 5050489 5049769 52.000000 0 145 181 NCBI RefSeq GCF_000414745.2-RS_2025_01_11 2025-01-11 5025 4709 57 na GCF_000414765.2 PRJNA224116 SAMN02415294 ATFS00000000.1 na 1192585 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 08-1080 strain=08-1080 na latest Scaffold Minor Full 2013-06-26 ASM41476v2 The Genome Institute GCA_000414765.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/765/GCF_000414765.2_ASM41476v2/ na na na haploid bacteria 4647561 4646861 52.000000 0 152 187 NCBI RefSeq GCF_000414765.2-RS_2025_08_18 2025-08-18 4577 4342 46 na GCF_000414785.2 PRJNA224116 SAMN02415295 ATFT00000000.1 na 1192586 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K0958 strain=2009K0958 na latest Scaffold Minor Full 2013-06-26 ASM41478v2 The Genome Institute GCA_000414785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/785/GCF_000414785.2_ASM41478v2/ na na na haploid bacteria 4705173 4704433 52.000000 0 139 176 NCBI RefSeq GCF_000414785.2-RS_2025_01_11 2025-01-11 4644 4399 55 na GCF_000414805.2 PRJNA224116 SAMN02415296 ATFU00000000.1 na 1192587 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1651 strain=2009K1651 na latest Scaffold Minor Full 2013-06-26 ASM41480v2 The Genome Institute GCA_000414805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/805/GCF_000414805.2_ASM41480v2/ na na na haploid bacteria 4615082 4614502 52.000000 0 141 170 NCBI RefSeq GCF_000414805.2-RS_2025_01_11 2025-01-11 4526 4301 51 na GCF_000414825.2 PRJNA224116 SAMN02415297 ATFV00000000.1 na 1192588 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1726 strain=2009K1726 na latest Scaffold Minor Full 2013-06-26 ASM41482v2 The Genome Institute GCA_000414825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/825/GCF_000414825.2_ASM41482v2/ na na na haploid bacteria 4724831 4724151 52.000000 0 156 190 NCBI RefSeq GCF_000414825.2-RS_2025_01_11 2025-01-11 4668 4412 53 na GCF_000414845.2 PRJNA224116 SAMN02415298 ATFW00000000.1 na 1192589 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0262 strain=2010K-0262 na latest Scaffold Minor Full 2013-06-26 ASM41484v2 The Genome Institute GCA_000414845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/845/GCF_000414845.2_ASM41484v2/ na na na haploid bacteria 4671501 4670821 52.000000 0 149 183 NCBI RefSeq GCF_000414845.2-RS_2025_01_11 2025-01-11 4608 4359 52 na GCF_000414865.2 PRJNA224116 SAMN02415299 ATFX00000000.1 na 1192590 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0267 strain=2010K-0267 na latest Scaffold Minor Full 2013-06-26 ASM41486v2 The Genome Institute GCA_000414865.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/865/GCF_000414865.2_ASM41486v2/ na na na haploid bacteria 4718909 4718209 52.000000 0 144 179 NCBI RefSeq GCF_000414865.2-RS_2025_01_11 2025-01-11 4671 4412 52 na GCF_000414885.2 PRJNA224116 SAMN02415300 ATFY00000000.1 na 1192591 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0271 strain=2010K-0271 na latest Scaffold Minor Full 2013-06-26 ASM41488v2 The Genome Institute GCA_000414885.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/885/GCF_000414885.2_ASM41488v2/ na na na haploid bacteria 4723097 4722517 52.000000 0 148 177 NCBI RefSeq GCF_000414885.2-RS_2025_01_11 2025-01-11 4670 4418 47 na GCF_000414905.2 PRJNA224116 SAMN02415301 ATFZ00000000.1 na 1192592 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0284 strain=2010K-0284 na latest Scaffold Minor Full 2013-06-26 ASM41490v2 The Genome Institute GCA_000414905.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/905/GCF_000414905.2_ASM41490v2/ na na na haploid bacteria 4726237 4725417 52.000000 0 146 187 NCBI RefSeq GCF_000414905.2-RS_2025_01_11 2025-01-11 4678 4415 54 na GCF_000414925.2 PRJNA224116 SAMN02415302 ATGA00000000.1 na 1192593 28901 Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0286 strain=2010K-0286 na latest Scaffold Minor Full 2013-06-26 ASM41492v2 The Genome Institute GCA_000414925.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/925/GCF_000414925.2_ASM41492v2/ na na na haploid bacteria 4729849 4729109 52.000000 0 159 196 NCBI RefSeq GCF_000414925.2-RS_2025_01_11 2025-01-11 4686 4418 53 na GCF_000414945.1 PRJNA224116 SAMN02436705 ATIC00000000.1 na 1259825 37734 Enterococcus casseliflavus 14-MB-W-14 strain=14-MB-W-14 na latest Scaffold Major Full 2013-06-26 ASM41494v1 The Genome Institute GCA_000414945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/945/GCF_000414945.1_ASM41494v1/ na na na haploid bacteria 3654018 3652198 42.500000 0 29 52 NCBI RefSeq GCF_000414945.1-RS_2026_03_31 2026-03-31 3469 3390 49 na GCF_000414985.1 PRJNA224116 SAMN02436774 ATIE00000000.1 na 1260366 1351 Enterococcus faecalis KI-6-1-110608-1 strain=KI-6-1-110608-1 na latest Scaffold Major Full 2013-06-26 ASM41498v1 The Genome Institute GCA_000414985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/414/985/GCF_000414985.1_ASM41498v1/ na na na haploid bacteria 2638133 2635193 37.500000 0 35 66 NCBI RefSeq GCF_000414985.1-RS_2026_01_21 2026-01-21 2508 2448 48 na GCF_000415005.1 PRJNA224116 SAMN02436913 ATIF00000000.1 na 1260365 1351 Enterococcus faecalis 02-MB-P-10 strain=02-MB-P-10 na latest Scaffold Major Full 2013-06-26 ASM41500v1 The Genome Institute GCA_000415005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/005/GCF_000415005.1_ASM41500v1/ na na na haploid bacteria 2904787 2903030 37.000000 0 78 107 NCBI RefSeq GCF_000415005.1-RS_2026_01_13 2026-01-13 2809 2702 45 na GCF_000415025.1 PRJNA224116 SAMN02436905 ATIG00000000.1 na 1260364 1351 Enterococcus faecalis 20-SD-BW-06 strain=20-SD-BW-06 na latest Scaffold Major Full 2013-06-26 ASM41502v1 The Genome Institute GCA_000415025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/025/GCF_000415025.1_ASM41502v1/ na na na haploid bacteria 2791512 2791112 37.500000 0 40 60 NCBI RefSeq GCF_000415025.1-RS_2026_01_19 2026-01-19 2696 2613 53 na GCF_000415045.1 PRJNA224116 SAMN02436906 ATIH00000000.1 na 1260363 1351 Enterococcus faecalis 02-MB-BW-10 strain=02-MB-BW-10 na latest Scaffold Major Full 2013-06-26 ASM41504v1 The Genome Institute GCA_000415045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/045/GCF_000415045.1_ASM41504v1/ na na na haploid bacteria 3053624 3051045 37.000000 0 157 196 NCBI RefSeq GCF_000415045.1-RS_2026_01_15 2026-01-15 3098 2962 53 na GCF_000415065.1 PRJNA224116 SAMN02436841 ATII00000000.1 na 1260362 1351 Enterococcus faecalis D811610-10 strain=D811610-10 na latest Scaffold Major Full 2013-06-26 ASM41506v1 The Genome Institute GCA_000415065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/065/GCF_000415065.1_ASM41506v1/ na na na haploid bacteria 2720519 2718591 37.500000 0 32 49 NCBI RefSeq GCF_000415065.1-RS_2026_01_19 2026-01-19 2610 2525 53 na GCF_000415085.1 PRJNA224116 SAMN02436833 ATIJ00000000.1 na 1260361 1351 Enterococcus faecalis B83616-1 strain=B83616-1 na latest Scaffold Major Full 2013-06-26 ASM41508v1 The Genome Institute GCA_000415085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/085/GCF_000415085.1_ASM41508v1/ na na na haploid bacteria 2656402 2654618 37.500000 0 51 88 NCBI RefSeq GCF_000415085.1-RS_2026_01_20 2026-01-20 2571 2481 53 na GCF_000415105.1 PRJNA224116 SAMN02436834 ATIK00000000.1 na 1260360 1351 Enterococcus faecalis 06-MB-S-10 strain=06-MB-S-10 na latest Scaffold Major Full 2013-06-26 ASM41510v1 The Genome Institute GCA_000415105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/105/GCF_000415105.1_ASM41510v1/ na na na haploid bacteria 3013781 3011483 37.000000 0 99 131 NCBI RefSeq GCF_000415105.1-RS_2026_01_13 2026-01-13 2998 2880 56 na GCF_000415125.1 PRJNA224116 SAMN02436835 ATIL00000000.1 na 1260359 1351 Enterococcus faecalis 06-MB-S-04 strain=06-MB-S-04 na latest Scaffold Major Full 2013-06-26 ASM41512v1 The Genome Institute GCA_000415125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/125/GCF_000415125.1_ASM41512v1/ na na na haploid bacteria 3040712 3038505 37.000000 0 120 154 NCBI RefSeq GCF_000415125.1-RS_2026_01_13 2026-01-13 3028 2905 53 na GCF_000415165.1 PRJNA224116 SAMN02436775 ATIN00000000.1 na 1260357 1351 Enterococcus faecalis F01966 strain=F01966 na latest Scaffold Major Full 2013-06-26 ASM41516v1 The Genome Institute GCA_000415165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/165/GCF_000415165.1_ASM41516v1/ na na na haploid bacteria 2932432 2929339 37.000000 0 120 157 NCBI RefSeq GCF_000415165.1-RS_2026_01_14 2026-01-14 2923 2787 56 na GCF_000415205.1 PRJNA224116 SAMN02436776 ATIP00000000.1 na 1260355 1351 Enterococcus faecalis 20-SD-BW-08 strain=20-SD-BW-08 na latest Scaffold Major Full 2013-06-26 ASM41520v1 The Genome Institute GCA_000415205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/205/GCF_000415205.1_ASM41520v1/ na na na haploid bacteria 2789667 2789347 37.500000 0 40 56 NCBI RefSeq GCF_000415205.1-RS_2026_01_19 2026-01-19 2689 2613 46 na GCF_000415225.1 PRJNA224116 SAMN02436707 ATIQ00000000.1 na 1258582 1351 Enterococcus faecalis 20.SD.W.06 strain=20.SD.W.06 na latest Scaffold Major Full 2013-06-26 ASM41522v1 The Genome Institute GCA_000415225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/225/GCF_000415225.1_ASM41522v1/ na na na haploid bacteria 2844029 2841277 37.500000 0 66 98 NCBI RefSeq GCF_000415225.1-RS_2026_01_13 2026-01-13 2765 2663 50 na GCF_000415245.2 PRJNA224116 SAMN02436777 ATIR00000000.1 na 1244145 1351 Enterococcus faecalis RP2S-4 strain=RP2S-4 na latest Scaffold Minor Full 2013-06-26 ASM41524v2 The Genome Institute GCA_000415245.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/245/GCF_000415245.2_ASM41524v2/ na na na haploid bacteria 3003683 3003203 37.000000 0 84 108 NCBI RefSeq GCF_000415245.2-RS_2026_01_21 2026-01-21 2937 2826 51 na GCF_000415265.2 PRJNA224116 SAMN02436907 ATIS00000000.1 na 1244155 1352 Enterococcus faecium SD3B-2 strain=SD3B-2 na latest Scaffold Minor Full 2013-06-26 ASM41526v2 The Genome Institute GCA_000415265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/265/GCF_000415265.2_ASM41526v2/ na na na haploid bacteria 2734296 2730654 38.000000 0 68 101 NCBI RefSeq GCF_000415265.2-RS_2026_01_21 2026-01-21 2706 2548 56 na GCF_000415285.2 PRJNA224116 SAMN02436838 ATIT00000000.1 na 1244154 1352 Enterococcus faecium SD2A-2 strain=SD2A-2 na latest Scaffold Minor Full 2013-06-26 ASM41528v2 The Genome Institute GCA_000415285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/285/GCF_000415285.2_ASM41528v2/ na na na haploid bacteria 2678215 2677435 38.000000 0 106 145 NCBI RefSeq GCF_000415285.2-RS_2026_01_23 2026-01-23 2629 2467 47 na GCF_000415305.1 PRJNA224116 SAMN02436768 ATIU00000000.1 na 1244153 1352 Enterococcus faecium SD1C-2 strain=SD1C-2 na latest Scaffold Major Full 2013-06-26 ASM41530v1 The Genome Institute GCA_000415305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/305/GCF_000415305.1_ASM41530v1/ na na na haploid bacteria 2640041 2639421 38.000000 0 86 117 NCBI RefSeq GCF_000415305.1-RS_2026_01_20 2026-01-20 2614 2469 53 na GCF_000415345.1 PRJNA224116 SAMN02436769 ATIW00000000.1 na 1244151 1352 Enterococcus faecium OC2A-1 strain=OC2A-1 na latest Scaffold Major Full 2013-06-26 ASM41534v1 The Genome Institute GCA_000415345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/345/GCF_000415345.1_ASM41534v1/ na na na haploid bacteria 2682515 2681695 38.000000 0 78 119 NCBI RefSeq GCF_000415345.1-RS_2026_01_20 2026-01-20 2628 2499 41 na GCF_000415365.1 PRJNA224116 SAMN02436770 ATIX00000000.1 na 1244150 1352 Enterococcus faecium LA4B-2 strain=LA4B-2 na latest Scaffold Major Full 2013-06-26 ASM41536v1 The Genome Institute GCA_000415365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/365/GCF_000415365.1_ASM41536v1/ na na na haploid bacteria 2705941 2705201 37.500000 0 69 106 NCBI RefSeq GCF_000415365.1-RS_2026_01_19 2026-01-19 2696 2564 55 na GCF_000415385.2 PRJNA224116 SAMN02436839 ATIY00000000.1 na 1244144 1351 Enterococcus faecalis WKS-26-18-2 strain=WKS-26-18-2 na latest Scaffold Minor Full 2013-06-26 ASM41538v2 The Genome Institute GCA_000415385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/385/GCF_000415385.2_ASM41538v2/ na na na haploid bacteria 2891543 2890763 37.500000 0 124 163 NCBI RefSeq GCF_000415385.2-RS_2026_01_21 2026-01-21 2921 2766 51 na GCF_000415405.1 PRJNA224116 SAMN02436908 ATIZ00000000.1 na 1244143 1351 Enterococcus faecalis VC1B-1 strain=VC1B-1 na latest Scaffold Major Full 2013-06-26 ASM41540v1 The Genome Institute GCA_000415405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/405/GCF_000415405.1_ASM41540v1/ na na na haploid bacteria 2876997 2876417 37.500000 0 54 83 NCBI RefSeq GCF_000415405.1-RS_2026_01_13 2026-01-13 2819 2736 55 na GCF_000415425.2 PRJNA224116 SAMN02436709 ATJA00000000.1 na 1244142 1351 Enterococcus faecalis UP2S-6 strain=UP2S-6 na latest Scaffold Minor Full 2013-06-26 ASM41542v2 The Genome Institute GCA_000415425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/425/GCF_000415425.2_ASM41542v2/ na na na haploid bacteria 2859140 2858540 37.500000 0 72 102 NCBI RefSeq GCF_000415425.2-RS_2026_01_21 2026-01-21 2824 2724 55 na GCF_000415445.2 PRJNA224116 SAMN02436840 ATJB00000000.1 na 1244141 1351 Enterococcus faecalis SLO2C-1 strain=SLO2C-1 na latest Scaffold Minor Full 2013-06-26 ASM41544v2 The Genome Institute GCA_000415445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/445/GCF_000415445.2_ASM41544v2/ na na na haploid bacteria 2780869 2780529 37.500000 0 38 55 NCBI RefSeq GCF_000415445.2-RS_2026_01_21 2026-01-21 2672 2602 52 na GCF_000415465.2 PRJNA224116 SAMN02436828 ATJC00000000.1 na 1244140 1351 Enterococcus faecalis LA3B-2 strain=LA3B-2 na latest Scaffold Minor Full 2013-06-26 ASM41546v2 The Genome Institute GCA_000415465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/465/GCF_000415465.2_ASM41546v2/ na na na haploid bacteria 2887708 2887288 37.500000 0 105 126 NCBI RefSeq GCF_000415465.2-RS_2026_01_21 2026-01-21 2903 2737 57 na GCF_000415485.1 PRJNA224116 SAMN02470023 ASRW00000000.1 na 1331062 562 Escherichia coli E2265 strain=E2265 na latest Scaffold Major Full 2013-06-27 E2265_1 Institute of Microbiology, Chinese Academy of Sciences GCA_000415485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/485/GCF_000415485.1_E2265_1/ na na na haploid bacteria 5070626 5067802 50.500000 0 410 627 NCBI RefSeq GCF_000415485.1-RS_2025_06_14 2025-06-14 5386 4858 114 na GCF_000415565.2 PRJNA224116 SAMN00860206 ATKR00000000.1 na 1112255 83554 Chlamydia psittaci 02DC16 strain=02DC16 na latest Scaffold Minor Full 2013-06-26 ASM41556v2 University of Maryland School of Medicine GCA_000415565.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/565/GCF_000415565.2_ASM41556v2/ na na na haploid bacteria 1180598 1179563 39.000000 0 3 13 NCBI RefSeq GCF_000415565.2-RS_2026_02_01 2026-02-01 1045 994 44 na GCF_000415645.1 PRJNA224116 SAMN00860209 ATKV00000000.1 na 1112259 83554 Chlamydia psittaci 02DC23 strain=02DC23 na latest Scaffold Major Full 2013-06-26 ASM41564v1 University of Maryland School of Medicine GCA_000415645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/645/GCF_000415645.1_ASM41564v1/ na na na haploid bacteria 1206602 1205057 39.000000 0 41 59 NCBI RefSeq GCF_000415645.1-RS_2025_08_01 2025-08-01 1055 1000 44 na GCF_000415685.2 PRJNA224116 SAMN00860213 ATKX00000000.1 na 1112265 83554 Chlamydia psittaci 04DC42 strain=04DC42 na latest Scaffold Minor Full 2013-06-26 ASM41568v2 University of Maryland School of Medicine GCA_000415685.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/685/GCF_000415685.2_ASM41568v2/ na na na haploid bacteria 1176917 1175597 39.000000 0 9 24 NCBI RefSeq GCF_000415685.2-RS_2025_08_05 2025-08-05 1039 987 44 na GCF_000415765.1 PRJNA224116 SAMN00860218 ATLB00000000.1 na 1112271 83554 Chlamydia psittaci 09DC80 strain=09DC80 na latest Scaffold Major Full 2013-06-26 ASM41576v1 University of Maryland School of Medicine GCA_000415765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/765/GCF_000415765.1_ASM41576v1/ na na na haploid bacteria 1190281 1189332 39.000000 0 16 31 NCBI RefSeq GCF_000415765.1-RS_2025_07_31 2025-07-31 1048 981 44 na GCF_000415785.1 PRJNA224116 SAMN00860247 ATLC00000000.1 na 1112251 83554 Chlamydia psittaci 99DC5 strain=99DC5 na latest Scaffold Major Full 2013-06-26 ASM41578v1 University of Maryland School of Medicine GCA_000415785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/785/GCF_000415785.1_ASM41578v1/ na na na haploid bacteria 1207659 1204201 39.000000 0 23 58 NCBI RefSeq GCF_000415785.1-RS_2025_08_05 2025-08-05 1069 1004 44 na GCF_000415805.1 PRJNA224116 SAMN00860249 ATLD00000000.1 na 1112250 83554 Chlamydia psittaci C19/98 strain=C19/98 na latest Scaffold Major Full 2013-06-26 ASM41580v1 University of Maryland School of Medicine GCA_000415805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/805/GCF_000415805.1_ASM41580v1/ na na na haploid bacteria 1189388 1188643 39.000000 0 9 24 NCBI RefSeq GCF_000415805.1-RS_2025_07_31 2025-07-31 1046 995 44 na GCF_000415825.1 PRJNA224116 SAMN01821293 ATLE00000000.1 na 1112264 83554 Chlamydia psittaci 03DC35 strain=03DC35 na latest Scaffold Major Full 2013-06-26 ASM41582v1 University of Maryland School of Medicine GCA_000415825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/825/GCF_000415825.1_ASM41582v1/ na na na haploid bacteria 1193644 1191541 39.000000 0 13 32 NCBI RefSeq GCF_000415825.1-RS_2025_08_05 2025-08-05 1061 1001 44 na GCF_000415905.1 PRJNA224116 SAMD00036748 BASG00000000.1 na 1337888 1462 Geobacillus kaustophilus GBlys strain=GBlys na latest Contig Major Full 2013-06-25 Gbl_1.0 Institute of Genetic Resources, Faculty of Agriculture, Kyushu University GCA_000415905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/905/GCF_000415905.1_Gbl_1.0/ na na na haploid bacteria 3541481 3541481 52.000000 0 216 216 NCBI RefSeq GCF_000415905.1-RS_2025_08_08 2025-08-08 3692 3449 108 23950135 GCF_000415925.1 PRJNA224116 SAMD00036749 BASH00000000.1 na 1423780 481720 Lentilactobacillus otakiensis DSM 19908 = JCM 15040 strain=JCM 15040 na latest Contig Major Full 2013-06-25 Lot_1.0 Institute of Genetic Resources, Faculty of Agriculture, Kyushu University GCA_000415925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/925/GCF_000415925.1_Lot_1.0/ na assembly from type material na haploid bacteria 2347132 2347132 42.500000 0 40 40 NCBI RefSeq GCF_000415925.1-RS_2025_08_08 2025-08-08 2321 2221 62 23929467 GCF_000415985.1 PRJNA224116 SAMN01940911 ARPY00000000.1 na 1238425 293091 Haloquadratum walsbyi J07HQW2 na na latest Scaffold Major Full 2013-09-04 HQW2_08err_032412a University of California, San Diego, Scripps Institution of Oceanography GCA_000415985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/415/985/GCF_000415985.1_HQW2_08err_032412a/ derived from metagenome na na haploid archaea 3594539 3578347 48.000000 0 1 187 NCBI RefSeq GCF_000415985.1-RS_2024_10_21 2024-10-21 3595 3244 50 23637883 GCF_000416175.1 PRJNA224116 SAMN02469399 ATLQ00000000.1 na 911240 911240 Pseudomonas sp. CF150 strain=CF150 na latest Scaffold Major Full 2013-06-27 ASM41617v1 Boise State University GCA_000416175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/175/GCF_000416175.1_ASM41617v1/ na na na haploid bacteria 6087908 6087896 60.000000 0 95 96 NCBI RefSeq GCF_000416175.1-RS_2024_08_21 2024-08-21 5619 5440 62 na GCF_000416195.1 PRJNA224116 SAMN02469403 ATLN00000000.1 na 911243 911243 Pseudomonas sp. CFII68 strain=CFII68 na latest Contig Major Full 2013-06-27 ASM41619v1 Boise State University GCA_000416195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/195/GCF_000416195.1_ASM41619v1/ na na na haploid bacteria 5919597 5919597 61.000000 0 128 128 NCBI RefSeq GCF_000416195.1-RS_2024_08_21 2024-08-21 5350 5158 62 na GCF_000416215.1 PRJNA224116 SAMN02469404 ATLP00000000.1 na 911241 911241 Pseudomonas sp. CF161 strain=CF161 na latest Scaffold Major Full 2013-06-27 ASM41621v1 Boise State University GCA_000416215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/215/GCF_000416215.1_ASM41621v1/ na na na haploid bacteria 6908137 6908125 62.500000 0 132 133 NCBI RefSeq GCF_000416215.1-RS_2024_08_21 2024-08-21 6486 6290 56 na GCF_000416235.1 PRJNA224116 SAMN02469401 ATLO00000000.1 na 911242 911242 Pseudomonas sp. CFII64 strain=CFII64 na latest Contig Major Full 2013-06-27 ASM41623v1 Boise State University GCA_000416235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/235/GCF_000416235.1_ASM41623v1/ na na na haploid bacteria 6415949 6415949 59.000000 0 54 54 NCBI RefSeq GCF_000416235.1-RS_2024_08_21 2024-08-21 5863 5690 61 na GCF_000416255.1 PRJNA224116 SAMN02469400 ATLM00000000.1 na 911244 911244 Pseudomonas sp. CFT9 strain=CFT9 na latest Contig Major Full 2013-06-27 ASM41625v1 Boise State University GCA_000416255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/255/GCF_000416255.1_ASM41625v1/ na na na haploid bacteria 6205326 6205326 60.000000 0 67 67 NCBI RefSeq GCF_000416255.1-RS_2024_08_21 2024-08-21 5792 5614 64 na GCF_000416295.1 PRJNA224116 SAMN02415211 ARYT00000000.1 na 1328330 28901 Salmonella enterica subsp. enterica serovar Mbandaka str. 2012K-0273 strain=2012K-0273 na latest Contig Major Full 2013-06-27 2012K-0273_Ver1 Centers for Disease Control & Prevention GCA_000416295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/295/GCF_000416295.1_2012K-0273_Ver1/ na na na haploid bacteria 4746396 4746396 52.000000 0 148 148 NCBI RefSeq GCF_000416295.1-RS_2025_01_06 2025-01-06 4714 4396 118 na GCF_000416385.1 PRJNA224116 SAMN02469804 AOHQ00000000.1 na 1273686 1273686 Mycobacterium sp. VKM Ac-1816D strain=VKM Ac-1816D na latest Contig Major Full 2013-06-28 M6May Center of Innovations and Technologies “Biologically active compounds and their applications” GCA_000416385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/385/GCF_000416385.1_M6May/ na na na haploid bacteria 5413599 5413599 67.000000 0 146 146 NCBI RefSeq GCF_000416385.1-RS_2024_08_08 2024-08-08 5204 5085 52 23474435 GCF_000416465.2 PRJNA224116 SAMN02470811 AOJV00000000.1 na 1198673 317 Pseudomonas syringae pv. theae ICMP 3923 strain=ICMP 3923 na latest Scaffold Minor Full 2013-07-01 ASM41646v2 The New Zealand Institute for Plant & Food Research Limited GCA_000416465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/465/GCF_000416465.2_ASM41646v2/ na na na haploid bacteria 6254836 6254820 58.500000 0 375 376 NCBI RefSeq GCF_000416465.2-RS_2026_01_21 2026-01-21 5823 5470 55 na GCF_000416485.1 PRJNA224116 SAMN02470802 AOJS00000000.1 na 1194423 317 Pseudomonas syringae pv. actinidiae ICMP 19071 strain=ICMP 19071 na latest Scaffold Major Full 2013-07-01 ASM41648v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/485/GCF_000416485.1_ASM41648v1/ na na na haploid bacteria 6021367 6021323 59.000000 0 391 392 NCBI RefSeq GCF_000416485.1-RS_2026_05_01 2026-05-01 5716 5212 69 23935484 GCF_000416505.1 PRJNA224116 SAMN02470795 AOJR00000000.1 na 1194406 317 Pseudomonas syringae pv. actinidiae ICMP 19073 strain=ICMP 19073 na latest Scaffold Major Full 2013-07-01 ASM41650v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/505/GCF_000416505.1_ASM41650v1/ na na na haploid bacteria 5974547 5974516 59.000000 0 745 746 NCBI RefSeq GCF_000416505.1-RS_2026_05_01 2026-05-01 5761 5258 49 23935484 GCF_000416525.1 PRJNA224116 SAMN02470794 AOJQ00000000.1 na 1194415 317 Pseudomonas syringae pv. actinidiae ICMP 19103 strain=ICMP 19103 na latest Contig Major Full 2013-07-01 ASM41652v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/525/GCF_000416525.1_ASM41652v1/ na na na haploid bacteria 6010992 6010992 59.000000 0 444 444 NCBI RefSeq GCF_000416525.1-RS_2026_05_01 2026-05-01 5608 5150 62 23935484 GCF_000416545.1 PRJNA224116 SAMN02470806 AOKE00000000.1 na 1194422 317 Pseudomonas syringae pv. actinidiae ICMP 19098 strain=ICMP 19098 na latest Contig Major Full 2013-07-01 ASM41654v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/545/GCF_000416545.1_ASM41654v1/ na na na haploid bacteria 6308188 6308188 58.500000 0 315 315 NCBI RefSeq GCF_000416545.1-RS_2026_04_24 2026-04-24 5779 5432 64 23935484 GCF_000416565.1 PRJNA224116 SAMN02415230 ATFA00000000.1 na 1346789 28901 Salmonella enterica subsp. salamae str. DMA-1 strain=DMA-1 na latest Scaffold Major Full 2013-07-01 Salmonella enterica subsp. salamae strain DMA-1 CSIR-IMTECH GCA_000416565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/565/GCF_000416565.1_Salmonella_enterica_subsp._salamae_strain_DMA-1/ na na na haploid bacteria 4825285 4824738 52.000000 0 32 42 NCBI RefSeq GCF_000416565.1-RS_2025_01_06 2025-01-06 4749 4531 87 na GCF_000416665.1 PRJNA224116 SAMN02470789 AOKB00000000.1 na 1194417 317 Pseudomonas syringae pv. actinidiae ICMP 9855 strain=ICMP 9855 na latest Scaffold Major Full 2013-07-01 ASM41666v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/665/GCF_000416665.1_ASM41666v1/ na na na haploid bacteria 5931093 5931059 59.000000 0 375 376 NCBI RefSeq GCF_000416665.1-RS_2026_04_30 2026-04-30 5501 5074 65 23935484 GCF_000416705.1 PRJNA224116 SAMN02470807 AOJX00000000.1 na 1194407 317 Pseudomonas syringae pv. actinidiae ICMP 19068 strain=ICMP 19068 na latest Scaffold Major Full 2013-07-01 ASM41670v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/705/GCF_000416705.1_ASM41670v1/ na na na haploid bacteria 6099446 6099273 58.500000 0 647 652 NCBI RefSeq GCF_000416705.1-RS_2026_04_14 2026-04-14 5833 5248 62 23935484 GCF_000416725.1 PRJNA224116 SAMN02470801 AOKN00000000.1 na 1194395 317 Pseudomonas syringae pv. actinidiae ICMP 19097 strain=ICMP 19097 na latest Scaffold Major Full 2013-07-01 ASM41672v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/725/GCF_000416725.1_ASM41672v1/ na na na haploid bacteria 6165163 6165149 58.500000 0 676 677 NCBI RefSeq GCF_000416725.1-RS_2026_04_26 2026-04-26 5838 5397 53 23935484 GCF_000416745.1 PRJNA224116 SAMN02470793 AOKJ00000000.1 na 1194401 317 Pseudomonas syringae pv. actinidiae ICMP 19094 strain=ICMP 19094 na latest Scaffold Major Full 2013-07-01 ASM41674v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/745/GCF_000416745.1_ASM41674v1/ na na na haploid bacteria 6285553 6285462 58.500000 0 497 501 NCBI RefSeq GCF_000416745.1-RS_2026_05_01 2026-05-01 5869 5450 63 23935484 GCF_000416765.1 PRJNA224116 SAMN02470792 AOKI00000000.1 na 1194403 317 Pseudomonas syringae pv. actinidiae ICMP 19095 strain=ICMP 19095 na latest Scaffold Major Full 2013-07-01 ASM41676v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/765/GCF_000416765.1_ASM41676v1/ na na na haploid bacteria 6200979 6200818 58.500000 0 739 743 NCBI RefSeq GCF_000416765.1-RS_2026_05_01 2026-05-01 5946 5481 61 23935484 GCF_000416785.2 PRJNA224116 SAMN02470791 AOKH00000000.1 na 1194402 317 Pseudomonas syringae pv. actinidiae ICMP 18883 strain=ICMP 18883 na latest Scaffold Minor Full 2013-07-01 ASM41678v2 The New Zealand Institute for Plant & Food Research Limited GCA_000416785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/785/GCF_000416785.2_ASM41678v2/ na na na haploid bacteria 6309762 6309668 58.500000 0 415 419 NCBI RefSeq GCF_000416785.2-RS_2026_05_01 2026-05-01 5847 5463 65 23935484 GCF_000416805.1 PRJNA224116 SAMN02470809 AOKD00000000.1 na 1194421 317 Pseudomonas syringae pv. actinidiae ICMP 19099 strain=ICMP 19099 na latest Scaffold Major Full 2013-07-01 ASM41680v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/805/GCF_000416805.1_ASM41680v1/ na na na haploid bacteria 6225312 6225298 58.500000 0 342 343 NCBI RefSeq GCF_000416805.1-RS_2026_04_25 2026-04-25 5699 5336 63 23935484 GCF_000416825.2 PRJNA224116 SAMN02470805 AOKC00000000.1 na 1194420 317 Pseudomonas syringae pv. actinidiae ICMP 19100 strain=ICMP 19100 na latest Scaffold Minor Full 2013-07-01 ASM41682v2 The New Zealand Institute for Plant & Food Research Limited GCA_000416825.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/825/GCF_000416825.2_ASM41682v2/ na na na haploid bacteria 6216613 6216517 58.500000 0 532 534 NCBI RefSeq GCF_000416825.2-RS_2026_04_25 2026-04-25 5747 5390 61 23935484 GCF_000416845.2 PRJNA224116 SAMN02470803 AOKA00000000.1 na 1194416 317 Pseudomonas syringae pv. actinidiae ICMP 19102 strain=ICMP 19102 na latest Scaffold Minor Full 2013-07-01 ASM41684v2 The New Zealand Institute for Plant & Food Research Limited GCA_000416845.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/845/GCF_000416845.2_ASM41684v2/ na na na haploid bacteria 6011206 6011192 59.000000 0 467 468 NCBI RefSeq GCF_000416845.2-RS_2026_04_30 2026-04-30 5602 5173 61 23935484 GCF_000416865.1 PRJNA224116 SAMN02470808 AOJZ00000000.1 na 1194409 317 Pseudomonas syringae pv. actinidiae ICMP 19104 strain=ICMP 19104 na latest Contig Major Full 2013-07-01 ASM41686v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/865/GCF_000416865.1_ASM41686v1/ na na na haploid bacteria 5963579 5963579 59.000000 0 434 434 NCBI RefSeq GCF_000416865.1-RS_2026_05_01 2026-05-01 5575 5113 65 23935484 GCF_000416885.1 PRJNA224116 SAMN02470812 AOJW00000000.1 na 1189079 317 Pseudomonas syringae pv. actinidiae ICMP 19072 strain=ICMP 19072 na latest Contig Major Full 2013-07-01 ASM41688v1 Plant & Food Research GCA_000416885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/885/GCF_000416885.1_ASM41688v1/ na na na haploid bacteria 6013211 6013211 59.000000 0 290 290 NCBI RefSeq GCF_000416885.1-RS_2026_04_30 2026-04-30 5645 5188 68 23935484 GCF_000416925.1 PRJNA224116 SAMN02470798 AOJT00000000.1 na 1189623 317 Pseudomonas syringae pv. actinidiae ICMP 18886 strain=ICMP 18886 na latest Scaffold Major Full 2013-07-01 ASM41692v1 Plant & Food Research GCA_000416925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/925/GCF_000416925.1_ASM41692v1/ na na na haploid bacteria 6034474 6034222 58.500000 0 1755 1765 NCBI RefSeq GCF_000416925.1-RS_2026_04_14 2026-04-14 6808 5797 58 23935484 GCF_000416945.1 PRJNA224116 SAMN02470804 AOKQ00000000.1 na 1194078 317 Pseudomonas syringae pv. actinidiae ICMP 18801 strain=ICMP 18801 na latest Scaffold Major Full 2013-07-01 ASM41694v1 The New Zealand Institute for Plant & Food Research Limited GCA_000416945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/945/GCF_000416945.1_ASM41694v1/ na na na haploid bacteria 6159413 6159351 58.500000 0 631 634 NCBI RefSeq GCF_000416945.1-RS_2026_04_30 2026-04-30 5808 5384 52 23935484 GCF_000416965.1 PRJNA224116 SAMN02471612 ATCL00000000.1 reference genome 1345023 1385984 Exiguobacterium chiriqhucha RW-2 strain=RW-2 na latest Contig Major Full 2013-07-01 23.K55 University of British Columbia GCA_000416965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/965/GCF_000416965.1_23.K55/ na assembly from type material na haploid bacteria 3019504 3019504 52.000000 0 23 23 NCBI RefSeq GCF_000416965.1-RS_2026_03_30 2026-03-30 3118 3043 61 23929485 GCF_000416985.1 PRJNA224116 SAMN02471610 ATDL00000000.1 reference genome 1346330 1385985 Sphingobacterium paucimobilis HER1398 strain=HER1398 na latest Contig Major Full 2013-07-01 23.k55 University of British Columbia GCA_000416985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/416/985/GCF_000416985.1_23.k55/ na assembly from type material na haploid bacteria 5126359 5126359 41.000000 0 23 23 NCBI RefSeq GCF_000416985.1-RS_2025_11_21 2025-11-21 4396 4299 89 23929486 GCF_000417005.1 PRJNA224116 SAMN02469912 ASXU00000000.1 na 1339267 1613 Limosilactobacillus fermentum FTDC8312 strain=FTDC8312 na latest Scaffold Major Full 2013-07-02 ASM41700v1 Indian Institute of Technology, Mandi, HP, India GCA_000417005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/005/GCF_000417005.1_ASM41700v1/ na na na haploid bacteria 1966551 1929451 52.000000 0 129 445 NCBI RefSeq GCF_000417005.1-RS_2026_04_04 2026-04-04 2072 1940 22 na GCF_000417045.1 PRJNA224116 SAMN02142021 ARSE00000000.1 na 1284803 573 Klebsiella pneumoniae UHKPC59 strain=UHKPC59 na latest Contig Major Full 2013-07-01 gkp17v01 JCVI GCA_000417045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/045/GCF_000417045.1_gkp17v01/ na na na haploid bacteria 5667894 5667894 57.000000 0 213 213 NCBI RefSeq GCF_000417045.1-RS_2025_01_05 2025-01-05 5719 5542 62 24913165 GCF_000417065.1 PRJNA224116 SAMN02142022 ARSC00000000.1 na 1284800 573 Klebsiella pneumoniae UHKPC61 strain=UHKPC61 na latest Contig Major Full 2013-07-01 gkp14v01 JCVI GCA_000417065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/065/GCF_000417065.1_gkp14v01/ na na na haploid bacteria 5397800 5397800 57.500000 0 138 138 NCBI RefSeq GCF_000417065.1-RS_2025_01_05 2025-01-05 5412 5253 58 24913165 GCF_000417105.1 PRJNA224116 SAMN02141969 ARRU00000000.1 na 1284789 573 Klebsiella pneumoniae UHKPC28 strain=UHKPC28 na latest Contig Major Full 2013-07-01 gkp3v01 JCVI GCA_000417105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/105/GCF_000417105.1_gkp3v01/ na na na haploid bacteria 5398963 5398963 57.500000 0 137 137 NCBI RefSeq GCF_000417105.1-RS_2025_01_05 2025-01-05 5422 5261 57 24913165 GCF_000417125.1 PRJNA224116 SAMN02142017 ARRV00000000.1 na 1284791 573 Klebsiella pneumoniae UHKPC47 strain=UHKPC47 na latest Contig Major Full 2013-07-01 gkp5v01 JCVI GCA_000417125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/125/GCF_000417125.1_gkp5v01/ na na na haploid bacteria 5498288 5498288 57.000000 0 195 195 NCBI RefSeq GCF_000417125.1-RS_2025_01_05 2025-01-05 5568 5373 60 24913165 GCF_000417145.1 PRJNA224116 SAMN02141985 ARSK00000000.1 na 1284809 573 Klebsiella pneumoniae UHKPC02 strain=UHKPC02 na latest Contig Major Full 2013-07-01 gkp23v01 JCVI GCA_000417145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/145/GCF_000417145.1_gkp23v01/ na na na haploid bacteria 5681241 5681241 57.000000 0 233 233 NCBI RefSeq GCF_000417145.1-RS_2025_01_05 2025-01-05 5758 5562 58 24913165 GCF_000417165.1 PRJNA224116 SAMN02142000 ARSI00000000.1 na 1284807 573 Klebsiella pneumoniae UHKPC31 strain=UHKPC31 na latest Contig Major Full 2013-07-01 gkp21v01 JCVI GCA_000417165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/165/GCF_000417165.1_gkp21v01/ na na na haploid bacteria 5390751 5390751 57.500000 0 136 136 NCBI RefSeq GCF_000417165.1-RS_2025_01_05 2025-01-05 5407 5248 58 24913165 GCF_000417185.1 PRJNA224116 SAMN02141971 ARSJ00000000.1 na 1284808 573 Klebsiella pneumoniae UHKPC06 strain=UHKPC06 na latest Contig Major Full 2013-07-01 gkp22v01 JCVI GCA_000417185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/185/GCF_000417185.1_gkp22v01/ na na na haploid bacteria 5407973 5407973 57.500000 0 141 141 NCBI RefSeq GCF_000417185.1-RS_2025_01_05 2025-01-05 5432 5265 61 24913165 GCF_000417205.1 PRJNA224116 SAMN02141982 ARSB00000000.1 na 1284799 573 Klebsiella pneumoniae DMC1316 strain=DMC1316 na latest Contig Major Full 2013-07-01 gkp13v01 JCVI GCA_000417205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/205/GCF_000417205.1_gkp13v01/ na na na haploid bacteria 5450966 5450966 57.000000 0 168 168 NCBI RefSeq GCF_000417205.1-RS_2025_01_05 2025-01-05 5459 5300 57 24913165 GCF_000417225.2 PRJNA224116 SAMN02141981 na na 1284798 573 Klebsiella pneumoniae DMC1097 strain=DMC1097 na latest Complete Genome Major Full 2015-07-23 ASM41722v2 JCVI GCA_000417225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/225/GCF_000417225.2_ASM41722v2/ na na na haploid bacteria 5710688 5710688 57.000000 4 4 4 NCBI RefSeq GCF_000417225.2-RS_2025_01_05 2025-01-05 5698 5458 124 24913165 GCF_000417245.1 PRJNA224116 SAMN02141976 ARSH00000000.1 na 1284806 573 Klebsiella pneumoniae UHKPC18 strain=UHKPC18 na latest Contig Major Full 2013-07-01 gkp20v01 JCVI GCA_000417245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/245/GCF_000417245.1_gkp20v01/ na na na haploid bacteria 5617463 5617463 57.000000 0 194 194 NCBI RefSeq GCF_000417245.1-RS_2025_01_05 2025-01-05 5658 5491 61 24913165 GCF_000417265.2 PRJNA224116 SAMN02141972 na na 1284804 573 Klebsiella pneumoniae UHKPC07 strain=UHKPC07 na latest Complete Genome Major Full 2015-07-23 ASM41726v2 JCVI GCA_000417265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/265/GCF_000417265.2_ASM41726v2/ na na na haploid bacteria 5523776 5523776 57.500000 4 4 4 NCBI RefSeq GCF_000417265.2-RS_2025_01_05 2025-01-05 5529 5293 124 na GCF_000417305.1 PRJNA224116 SAMN02142026 ARRW00000000.1 na 1284793 573 Klebsiella pneumoniae UHKPC69 strain=UHKPC69 na latest Contig Major Full 2013-07-01 gkp7v01 JCVI GCA_000417305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/305/GCF_000417305.1_gkp7v01/ na na na haploid bacteria 5606925 5606925 57.000000 0 194 194 NCBI RefSeq GCF_000417305.1-RS_2025_01_05 2025-01-05 5654 5482 63 24913165 GCF_000417325.1 PRJNA224116 SAMN02142027 ARRX00000000.1 na 1284794 573 Klebsiella pneumoniae UHKPC77 strain=UHKPC77 na latest Contig Major Full 2013-07-01 gkp8v01 JCVI GCA_000417325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/325/GCF_000417325.1_gkp8v01/ na na na haploid bacteria 5622301 5622301 57.000000 0 194 194 NCBI RefSeq GCF_000417325.1-RS_2025_01_05 2025-01-05 5674 5500 66 24913165 GCF_000417345.1 PRJNA224116 SAMN02142029 ARRY00000000.1 na 1284795 573 Klebsiella pneumoniae UHKPC96 strain=UHKPC96 na latest Contig Major Full 2013-07-01 gkp9v01 JCVI GCA_000417345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/345/GCF_000417345.1_gkp9v01/ na na na haploid bacteria 5610303 5610303 57.000000 0 188 188 NCBI RefSeq GCF_000417345.1-RS_2025_01_05 2025-01-05 5654 5487 61 24913165 GCF_000417365.1 PRJNA224116 SAMN02141989 ARSN00000000.1 na 1304917 573 Klebsiella pneumoniae 160_1080 strain=160_1080 na latest Contig Major Full 2013-07-01 gkp50v01 JCVI GCA_000417365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/365/GCF_000417365.1_gkp50v01/ na na na haploid bacteria 5390028 5390028 57.500000 0 144 144 NCBI RefSeq GCF_000417365.1-RS_2025_01_05 2025-01-05 5414 5247 61 24913165 GCF_000417385.1 PRJNA224116 SAMN02141705 ARSO00000000.1 na 1304918 573 Klebsiella pneumoniae 120_1020 strain=120_1020 na latest Contig Major Full 2013-07-01 gkp51v01 JCVI GCA_000417385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/385/GCF_000417385.1_gkp51v01/ na na na haploid bacteria 5542623 5542623 57.000000 0 232 232 NCBI RefSeq GCF_000417385.1-RS_2025_01_05 2025-01-05 5648 5435 58 24913165 GCF_000417405.1 PRJNA224116 SAMN02141988 ARSP00000000.1 na 1304916 573 Klebsiella pneumoniae 140_1040 strain=140_1040 na latest Contig Major Full 2013-07-01 gkp49v01 JCVI GCA_000417405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/405/GCF_000417405.1_gkp49v01/ na na na haploid bacteria 5498752 5498752 57.500000 0 206 206 NCBI RefSeq GCF_000417405.1-RS_2025_01_05 2025-01-05 5572 5372 59 24913165 GCF_000417425.1 PRJNA224116 SAMN02141990 ARSQ00000000.1 na 1304919 573 Klebsiella pneumoniae 280_1220 strain=280_1220 na latest Contig Major Full 2013-07-01 gkp52v01 JCVI GCA_000417425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/425/GCF_000417425.1_gkp52v01/ na na na haploid bacteria 5406392 5406392 57.500000 0 153 153 NCBI RefSeq GCF_000417425.1-RS_2025_01_05 2025-01-05 5432 5264 65 24913165 GCF_000417445.1 PRJNA224116 SAMN02142023 ARSL00000000.1 na 1284792 573 Klebsiella pneumoniae UHKPC67 strain=UHKPC67 na latest Contig Major Full 2013-07-01 gkp6v01 JCVI GCA_000417445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/445/GCF_000417445.1_gkp6v01/ na na na haploid bacteria 5541667 5541667 57.000000 0 151 151 NCBI RefSeq GCF_000417445.1-RS_2025_01_05 2025-01-05 5577 5416 56 24913165 GCF_000417465.1 PRJNA224116 SAMN02141974 ARSM00000000.1 na 1284818 573 Klebsiella pneumoniae UHKPC179 strain=UHKPC179 na latest Contig Major Full 2013-07-01 gkp32v01 JCVI GCA_000417465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/465/GCF_000417465.1_gkp32v01/ na na na haploid bacteria 5515994 5515994 57.000000 0 174 174 NCBI RefSeq GCF_000417465.1-RS_2025_01_05 2025-01-05 5418 5227 60 24913165 GCF_000417485.1 PRJNA224116 SAMN02141980 ARRZ00000000.1 na 1284797 573 Klebsiella pneumoniae DMC0799 strain=DMC0799 na latest Contig Major Full 2013-07-01 gkp11v01 JCVI GCA_000417485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/485/GCF_000417485.1_gkp11v01/ na na na haploid bacteria 5431615 5431615 57.000000 0 120 120 NCBI RefSeq GCF_000417485.1-RS_2025_01_05 2025-01-05 5356 5192 58 24913165 GCF_000417505.1 PRJNA224116 SAMN02470673 APHY00000000.1 na 1273103 1273103 Megasphaera sp. NM10 strain=NM10 na latest Contig Major Full 2013-07-02 NM10version1 National Centre for Cell Science GCA_000417505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/505/GCF_000417505.1_NM10version1/ na na na haploid bacteria 2615280 2615280 53.000000 0 175 175 NCBI RefSeq GCF_000417505.1-RS_2025_08_25 2025-08-25 2727 2475 105 24260205 GCF_000417525.1 PRJNA224116 SAMN02470615 APHX00000000.1 na 1285585 1285585 Megasphaera sp. BL7 strain=BL7 na latest Contig Major Full 2013-07-02 BL7version1 National Centre for Cell Science GCA_000417525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/525/GCF_000417525.1_BL7version1/ na na na haploid bacteria 2656480 2656480 53.000000 0 246 246 NCBI RefSeq GCF_000417525.1-RS_2024_05_07 2024-05-07 2779 2531 111 24260205 GCF_000417545.1 PRJNA224116 SAMN02141975 ARSG00000000.1 na 1284805 573 Klebsiella pneumoniae UHKPC17 strain=UHKPC17 na latest Contig Major Full 2013-07-01 gkp19v01 JCVI GCA_000417545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/545/GCF_000417545.1_gkp19v01/ na na na haploid bacteria 5616818 5616818 57.000000 0 186 186 NCBI RefSeq GCF_000417545.1-RS_2025_01_05 2025-01-05 5663 5491 61 24913165 GCF_000417585.1 PRJNA224116 SAMN00860212 ATMV00000000.1 na 1112260 83554 Chlamydia psittaci 02DC24 strain=02DC24 na latest Scaffold Major Full 2013-07-02 ASM41758v1 University of Maryland School of Medicine GCA_000417585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/585/GCF_000417585.1_ASM41758v1/ na na na haploid bacteria 1192107 1190241 39.000000 0 25 39 NCBI RefSeq GCF_000417585.1-RS_2025_07_31 2025-07-31 1046 995 44 na GCF_000417625.1 PRJNA224116 SAMN02469998 ASXS00000000.1 na 1336752 676 Vibrio fluvialis PG41 strain=PG41 na latest Contig Major Full 2013-07-02 Vibrio fluvalis PG41 Institute of Microbial Technology GCA_000417625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/625/GCF_000417625.1_Vibrio_fluvalis_PG41/ na na na haploid bacteria 5343550 5343550 48.000000 0 49 49 NCBI RefSeq GCF_000417625.1-RS_2026_01_23 2026-01-23 5213 5049 130 23895343 GCF_000417695.2 PRJNA224116 SAMN01831300 ATNB00000000.1 na 1405396 1405396 Chlamydia ibidis strain=10_1398_11 na latest Scaffold Minor Full 2013-07-02 ASM41769v2 IGS GCA_000417695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/695/GCF_000417695.2_ASM41769v2/ na na na haploid bacteria 1213046 1211691 38.500000 0 153 183 NCBI RefSeq GCF_000417695.2-RS_2025_08_06 2025-08-06 1019 968 44 na GCF_000417735.2 PRJNA224116 SAMN02435924 ATND00000000.1 reference genome 1457141 1457141 Chlamydia avium strain=10_881_SC42 na latest Scaffold Minor Full 2013-07-02 ASM41773v2 IGS GCA_000417735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/735/GCF_000417735.2_ASM41773v2/ na na na haploid bacteria 1051102 1050992 37.000000 0 6 7 NCBI RefSeq GCF_000417735.2-RS_2026_03_30 2026-03-30 964 911 47 na GCF_000417765.1 PRJNA224116 SAMN02471211 AKXP00000000.1 na 1198672 1718 Corynebacterium glutamicum Z188 strain=Z188 na latest Contig Major Full 2013-07-02 ASM41776v1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences GCA_000417765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/765/GCF_000417765.1_ASM41776v1/ na na na haploid bacteria 3283833 3283833 54.000000 0 35 35 NCBI RefSeq GCF_000417765.1-RS_2026_01_30 2026-01-30 3072 2971 62 na GCF_000417785.2 PRJNA224116 SAMN02471179 ATHZ00000000.1 na 1346793 470 Acinetobacter baumannii AB-HKU3-10 strain=AB-HKU3-10 na latest Scaffold Minor Full 2013-07-02 ASM41778v2 The University of Hong Kong GCA_000417785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/785/GCF_000417785.2_ASM41778v2/ na na na haploid bacteria 3924940 3920802 39.000000 0 138 164 NCBI RefSeq GCF_000417785.2-RS_2025_04_23 2025-04-23 3814 3622 73 na GCF_000417805.2 PRJNA224116 SAMN02471176 ATHY00000000.1 na 1346792 470 Acinetobacter baumannii AB-HKU3-08 strain=AB-HKU3-08 na latest Scaffold Minor Full 2013-07-02 ASM41780v2 The University of Hong Kong GCA_000417805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/805/GCF_000417805.2_ASM41780v2/ na na na haploid bacteria 4043191 4040411 39.000000 0 106 133 NCBI RefSeq GCF_000417805.2-RS_2025_04_23 2025-04-23 3975 3789 73 na GCF_000417875.1 PRJNA245148 SAMN02981510 AOUS00000000.1 reference genome 1277687 84751 Pseudozyma flocculosa PF-1 strain=PF-1 na latest Scaffold Major Full 2013-07-08 Pflocc_1.0 Université Laval GCA_000417875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/875/GCF_000417875.1_Pflocc_1.0/ na na na haploid fungi 23305380 22963743 65.500000 0 39 1104 Université Laval Annotation submitted by Université Laval 2021-12-10 6877 6877 0 23800965 GCF_000417925.1 PRJNA224116 SAMN02471085 ATAS00000000.1 na 1341711 1773 Mycobacterium tuberculosis PanR0202 strain=PanR0202 na latest Chromosome Major Full 2013-07-09 fedora0202c Texas A&M University GCA_000417925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/925/GCF_000417925.1_fedora0202c/ na na na haploid bacteria 4391869 4367934 65.500000 1 1 57 NCBI RefSeq GCF_000417925.1-RS_2025_06_29 2025-06-29 4170 3913 51 3884993;23884993 GCF_000417945.2 PRJNA224116 SAMN02470520 ATCU00000000.2 na 1345000 1282 Staphylococcus epidermidis APO27 strain=APO27 na latest Contig Major Full 2013-11-26 APO27_v2 Max-Planck-Institute for Evolutionary Biology GCA_000417945.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/945/GCF_000417945.2_APO27_v2/ na na na haploid bacteria 2576963 2576963 32.000000 0 246 246 NCBI RefSeq GCF_000417945.2-RS_2026_01_23 2026-01-23 2605 2388 77 24435862 GCF_000417965.2 PRJNA224116 SAMN02470527 ATCV00000000.2 na 1344999 1282 Staphylococcus epidermidis APO35 strain=APO35 na latest Contig Major Full 2013-11-07 APO35.v2 Max-Planck-Institute for Evolutionary Biology GCA_000417965.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/965/GCF_000417965.2_APO35.v2/ na na na haploid bacteria 2556994 2556994 32.000000 0 263 263 NCBI RefSeq GCF_000417965.2-RS_2026_01_23 2026-01-23 2559 2382 29 24435862 GCF_000417985.2 PRJNA224116 SAMN02470515 ATCW00000000.2 na 1344998 1282 Staphylococcus epidermidis CIM40 strain=CIM40 na latest Contig Major Full 2013-11-26 CIM40_v2 Max-Planck-Institute for Evolutionary Biology GCA_000417985.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/417/985/GCF_000417985.2_CIM40_v2/ na na na haploid bacteria 2583145 2583145 32.000000 0 148 148 NCBI RefSeq GCF_000417985.2-RS_2026_01_23 2026-01-23 2579 2372 74 24435862 GCF_000418005.2 PRJNA224116 SAMN02470526 ATCZ00000000.2 na 1344995 1282 Staphylococcus epidermidis MC28 strain=MC28 na latest Contig Major Full 2013-11-26 MC28_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418005.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/005/GCF_000418005.2_MC28_v2/ na na na haploid bacteria 2559207 2559207 32.000000 0 381 381 NCBI RefSeq GCF_000418005.2-RS_2026_01_14 2026-01-14 2598 2388 43 na GCF_000418025.2 PRJNA224116 SAMN02470517 ATDA00000000.2 na 1344994 1282 Staphylococcus epidermidis Scl19 strain=Scl19 na latest Scaffold Major Full 2013-11-27 SCL19_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418025.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/025/GCF_000418025.2_SCL19_v2/ na na na haploid bacteria 2586583 2586083 32.000000 0 143 193 NCBI RefSeq GCF_000418025.2-RS_2026_01_23 2026-01-23 2582 2371 72 24435862 GCF_000418045.1 PRJNA224116 SAMN02470518 ATDB00000000.1 na 1344993 1282 Staphylococcus epidermidis Scl22 strain=Scl22 na latest Scaffold Major Full 2013-07-03 Scl22 Max-Planck-Institute for Evolutionary Biology GCA_000418045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/045/GCF_000418045.1_Scl22/ na na na haploid bacteria 2371821 2371711 32.000000 0 490 501 NCBI RefSeq GCF_000418045.1-RS_2026_01_13 2026-01-13 2417 2258 26 na GCF_000418065.2 PRJNA224116 SAMN02470524 ATDC00000000.2 na 1344992 1282 Staphylococcus epidermidis Scl25 strain=Scl25 na latest Scaffold Major Full 2013-11-21 SCL25_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/065/GCF_000418065.2_SCL25_v2/ na na na haploid bacteria 2458755 2458135 32.000000 0 139 201 NCBI RefSeq GCF_000418065.2-RS_2026_01_23 2026-01-23 2373 2229 42 24435862 GCF_000418085.2 PRJNA224116 SAMN02470525 ATDD00000000.2 na 1344991 1282 Staphylococcus epidermidis Scl31 strain=Scl31 na latest Scaffold Major Full 2013-11-21 SCL31_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/085/GCF_000418085.2_SCL31_v2/ na na na haploid bacteria 2533338 2533328 32.000000 0 401 402 NCBI RefSeq GCF_000418085.2-RS_2026_01_14 2026-01-14 2602 2400 33 na GCF_000418105.2 PRJNA224116 SAMN02470522 ATDE00000000.2 na 1344990 1282 Staphylococcus epidermidis CIM37 strain=CIM37 na latest Contig Major Full 2013-11-21 CIM37_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418105.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/105/GCF_000418105.2_CIM37_v2/ na na na haploid bacteria 2575170 2575170 32.000000 0 277 277 NCBI RefSeq GCF_000418105.2-RS_2026_01_23 2026-01-23 2577 2394 41 24435862 GCF_000418125.2 PRJNA224116 SAMN02470523 ATDF00000000.2 na 1344989 1282 Staphylococcus epidermidis CIM28 strain=CIM28 na latest Scaffold Major Full 2013-11-07 CIM28_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418125.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/125/GCF_000418125.2_CIM28_v2/ na na na haploid bacteria 2689091 2688706 32.000000 0 91 129 NCBI RefSeq GCF_000418125.2-RS_2026_01_23 2026-01-23 2669 2451 94 24435862 GCF_000418145.2 PRJNA224116 SAMN02470528 ATDG00000000.2 na 1344988 1282 Staphylococcus epidermidis WI05 strain=WI05 na latest Scaffold Major Full 2013-11-26 WI05_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418145.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/145/GCF_000418145.2_WI05_v2/ na na na haploid bacteria 2600453 2600023 32.000000 0 114 157 NCBI RefSeq GCF_000418145.2-RS_2026_01_23 2026-01-23 2600 2373 86 24435862 GCF_000418165.2 PRJNA224116 SAMN02470519 ATDH00000000.2 na 1344987 1282 Staphylococcus epidermidis WI09 strain=WI09 na latest Scaffold Major Full 2013-11-26 WI09_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418165.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/165/GCF_000418165.2_WI09_v2/ na na na haploid bacteria 2762809 2762379 32.000000 0 95 138 NCBI RefSeq GCF_000418165.2-RS_2026_01_23 2026-01-23 2735 2520 92 24435862 GCF_000418185.2 PRJNA224116 SAMN02470521 ATCX00000000.2 na 1344997 1282 Staphylococcus epidermidis MC16 strain=MC16 na latest Contig Major Full 2013-11-27 MC16_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/185/GCF_000418185.2_MC16_v2/ na na na haploid bacteria 2542462 2542462 32.000000 0 246 246 NCBI RefSeq GCF_000418185.2-RS_2026_01_23 2026-01-23 2509 2361 20 24435862 GCF_000418205.2 PRJNA224116 SAMN02470516 ATCY00000000.2 na 1344996 1282 Staphylococcus epidermidis MC19 strain=MC19 na latest Contig Major Full 2013-11-27 MC19_v2 Max-Planck-Institute for Evolutionary Biology GCA_000418205.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/205/GCF_000418205.2_MC19_v2/ na na na haploid bacteria 2564337 2564337 32.000000 0 219 219 NCBI RefSeq GCF_000418205.2-RS_2026_01_23 2026-01-23 2546 2377 36 24435862 GCF_000418305.1 PRJNA224116 SAMN02603914 na na 571800 571800 Psychrobacter sp. G strain=G na latest Complete Genome Major Full 2013-07-05 ASM41830v1 The First Institute of Oceanography, SOA GCA_000418305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/305/GCF_000418305.1_ASM41830v1/ na na na haploid bacteria 3113999 3113999 42.500000 4 4 4 NCBI RefSeq GCF_000418305.1-RS_2025_02_01 2025-02-01 2650 2564 64 24051316 GCF_000418325.1 PRJNA224116 SAMN02603858 na na 1254432 56 Sorangium cellulosum So0157-2 strain=So0157-2 na latest Complete Genome Major Full 2013-07-05 ASM41832v1 Shandong University GCA_000418325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/325/GCF_000418325.1_ASM41832v1/ na na na haploid bacteria 14782125 14782125 72.000000 1 1 1 NCBI RefSeq GCF_000418325.1-RS_2026_03_31 2026-03-31 11023 10741 81 23812535 GCF_000418365.1 PRJNA224116 SAMN02603028 na reference genome 1200352 89154 Corynebacterium terpenotabidum Y-11 strain=Y-11 na latest Complete Genome Major Full 2013-07-05 ASM41836v1 Bielefeld University GCA_000418365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/365/GCF_000418365.1_ASM41836v1/ na assembly from type material na haploid bacteria 2751233 2751233 67.000000 1 1 1 NCBI RefSeq GCF_000418365.1-RS_2025_11_23 2025-11-23 2473 2376 75 25197436 GCF_000418455.1 PRJNA224116 SAMN02604192 na na 1343740 1226757 Streptomyces rapamycinicus NRRL 5491 strain=NRRL 5491 na latest Chromosome Major Full 2013-07-08 ASM41845v1 University of Kaiserslautern GCA_000418455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/455/GCF_000418455.1_ASM41845v1/ na assembly from type material na haploid bacteria 12700734 12385522 71.000000 1 1 394 NCBI RefSeq GCF_000418455.1-RS_2026_03_31 2026-03-31 10524 9948 70 23929477 GCF_000418475.1 PRJNA224116 SAMN02603328 na na 1316933 47715 Lacticaseibacillus rhamnosus LOCK900 strain=LOCK900 na latest Complete Genome Major Full 2013-07-08 ASM41847v1 IBB PAS GCA_000418475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/475/GCF_000418475.1_ASM41847v1/ na na na haploid bacteria 2883376 2883376 47.000000 1 1 1 NCBI RefSeq GCF_000418475.1-RS_2025_09_10 2025-09-10 2690 2580 77 23950137 GCF_000418495.1 PRJNA224116 SAMN02603329 na na 1318634 47715 Lacticaseibacillus rhamnosus LOCK908 strain=LOCK908 na latest Complete Genome Major Full 2013-07-08 ASM41849v1 IBB PAS GCA_000418495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/495/GCF_000418495.1_ASM41849v1/ na na na haploid bacteria 2990900 2990900 47.000000 1 1 1 NCBI RefSeq GCF_000418495.1-RS_2025_09_10 2025-09-10 2781 2659 80 24558250 GCF_000418535.1 PRJNA224116 SAMN02603187 na na 1138871 1767 Mycobacterium intracellulare subsp. yongonense 05-1390 strain=05-1390 na latest Complete Genome Major Full 2013-07-08 ASM41853v2 Department of Microbiology and Immunology, Seoul National University GCA_000418535.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/535/GCF_000418535.1_ASM41853v2/ na assembly from type material na haploid bacteria 5662088 5662088 68.000000 3 3 3 NCBI RefSeq GCF_000418535.1-RS_2026_02_02 2026-02-02 5347 5152 52 23929490 GCF_000418575.1 PRJNA224116 SAMN02205188 ATFQ00000000.1 na 1306401 36809 Mycobacteroides abscessus subsp. bolletii CRM-0020 strain=CRM-0020 CRM0020 latest Contig Major Full 2013-07-08 CRM0020_v1.0 National Jewish Health GCA_000418575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/575/GCF_000418575.1_CRM0020_v1.0/ na na na haploid bacteria 4840000 4840000 64.500000 1 44 44 NCBI RefSeq GCF_000418575.1-RS_2026_01_27 2026-01-27 4844 4735 52 23950125 GCF_000418595.1 PRJNA224116 SAMN02436757 ATNV00000000.1 na 1333597 562 Escherichia coli MC6003 strain=MC6003 na latest Scaffold Major Full 2013-07-08 E_coliMC6003-1.0 The Genome Institute GCA_000418595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/595/GCF_000418595.1_E_coliMC6003-1.0/ na na na haploid bacteria 5019376 5015876 50.500000 0 163 198 NCBI RefSeq GCF_000418595.1-RS_2025_08_12 2025-08-12 4951 4658 81 na GCF_000418615.2 PRJNA224116 SAMN02436900 ATNW00000000.1 na 1333596 562 Escherichia coli MC6002 strain=MC6002 na latest Scaffold Minor Full 2013-07-08 E_coliMC6002-1.0 The Genome Institute GCA_000418615.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/615/GCF_000418615.2_E_coliMC6002-1.0/ na na na haploid bacteria 5108045 5101245 50.500000 0 225 293 NCBI RefSeq GCF_000418615.2-RS_2025_06_17 2025-06-17 5119 4828 81 na GCF_000418635.1 PRJNA224116 SAMN02436901 ATNX00000000.1 na 1333595 562 Escherichia coli MC23 strain=MC23 na latest Scaffold Major Full 2013-07-08 E_coliMC23-1.0 The Genome Institute GCA_000418635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/635/GCF_000418635.1_E_coliMC23-1.0/ na na na haploid bacteria 5131104 5124204 50.500000 0 213 282 NCBI RefSeq GCF_000418635.1-RS_2025_08_11 2025-08-11 5134 4840 81 na GCF_000418655.1 PRJNA224116 SAMN02436758 ATNY00000000.1 na 1333594 562 Escherichia coli MC21 strain=MC21 na latest Scaffold Major Full 2013-07-08 E_coliMC21-1.0 The Genome Institute GCA_000418655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/655/GCF_000418655.1_E_coliMC21-1.0/ na na na haploid bacteria 5135851 5128451 50.500000 0 227 301 NCBI RefSeq GCF_000418655.1-RS_2025_08_11 2025-08-11 5151 4839 81 na GCF_000418675.1 PRJNA224116 SAMN02436713 ATNZ00000000.1 na 1333593 562 Escherichia coli MC19 strain=MC19 na latest Scaffold Major Full 2013-07-08 E_coliMC19-1.0 The Genome Institute GCA_000418675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/675/GCF_000418675.1_E_coliMC19-1.0/ na na na haploid bacteria 5117598 5110498 50.500000 0 298 369 NCBI RefSeq GCF_000418675.1-RS_2025_06_14 2025-06-14 5121 4854 56 na GCF_000418695.2 PRJNA224116 SAMN02436759 ATOA00000000.1 na 1333592 562 Escherichia coli AB43739056-isolate1 strain=AB43739056-isolate1 na latest Scaffold Minor Full 2013-07-08 E_coliAB43739056-isolate1-1.0 The Genome Institute GCA_000418695.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/695/GCF_000418695.2_E_coliAB43739056-isolate1-1.0/ na na na haploid bacteria 5124077 5115577 50.500000 0 192 277 NCBI RefSeq GCF_000418695.2-RS_2025_06_17 2025-06-17 5126 4845 80 na GCF_000418715.1 PRJNA224116 SAMN02436902 ATOB00000000.1 na 1333591 562 Escherichia coli AB42602061-isolate1 strain=AB42602061-isolate1 na latest Scaffold Major Full 2013-07-08 E_coliAB42602061-isolate1-1.0 The Genome Institute GCA_000418715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/715/GCF_000418715.1_E_coliAB42602061-isolate1-1.0/ na na na haploid bacteria 5030886 5023886 50.500000 0 126 196 NCBI RefSeq GCF_000418715.1-RS_2025_08_11 2025-08-11 4954 4664 82 na GCF_000418735.2 PRJNA224116 SAMN02436903 ATOC00000000.1 na 1333590 562 Escherichia coli AB42554418-isolate1 strain=AB42554418-isolate1 na latest Scaffold Minor Full 2013-07-08 E_coliAB42554418-isolate1-1.0 The Genome Institute GCA_000418735.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/735/GCF_000418735.2_E_coliAB42554418-isolate1-1.0/ na na na haploid bacteria 5016789 5011689 50.500000 0 166 217 NCBI RefSeq GCF_000418735.2-RS_2025_06_16 2025-06-16 4960 4672 76 na GCF_000418755.2 PRJNA224116 SAMN02436760 ATOD00000000.1 na 1333589 562 Escherichia coli AB42410445-isolate1 strain=AB42410445-isolate1 na latest Scaffold Minor Full 2013-07-08 E_coliAB42410445-isolate1-1.0 The Genome Institute GCA_000418755.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/755/GCF_000418755.2_E_coliAB42410445-isolate1-1.0/ na na na haploid bacteria 5022286 5014486 50.500000 0 152 230 NCBI RefSeq GCF_000418755.2-RS_2025_06_15 2025-06-15 4960 4659 78 na GCF_000418775.1 PRJNA224116 SAMN02436892 ATOE00000000.1 na 1333588 562 Escherichia coli 112469218-isolate1 strain=112469218-isolate1 na latest Scaffold Major Full 2013-07-08 E_coli112469218-isolate1-1.0 The Genome Institute GCA_000418775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/775/GCF_000418775.1_E_coli112469218-isolate1-1.0/ na na na haploid bacteria 5117843 5111643 50.500000 0 265 327 NCBI RefSeq GCF_000418775.1-RS_2025_06_13 2025-06-13 5117 4837 63 na GCF_000418795.1 PRJNA224116 SAMN02436714 ATOF00000000.1 na 1333587 562 Escherichia coli 112469215-isolate1 strain=112469215-isolate1 na latest Scaffold Major Full 2013-07-08 E_coli112469215-isolate1-1.0 The Genome Institute GCA_000418795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/795/GCF_000418795.1_E_coli112469215-isolate1-1.0/ na na na haploid bacteria 5110213 5103313 50.500000 0 351 420 NCBI RefSeq GCF_000418795.1-RS_2025_06_14 2025-06-14 5161 4779 65 na GCF_000418815.1 PRJNA224116 SAMN02436761 ATOG00000000.1 na 1333585 615 Serratia marcescens MC620 strain=MC620 na latest Scaffold Major Full 2013-07-08 S_marcescensMC620-1.0 The Genome Institute GCA_000418815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/815/GCF_000418815.1_S_marcescensMC620-1.0/ na na na haploid bacteria 5259807 5255807 59.000000 0 138 178 NCBI RefSeq GCF_000418815.1-RS_2026_01_23 2026-01-23 5113 4954 88 na GCF_000418835.1 PRJNA224116 SAMN02436893 ATOH00000000.1 na 1333584 615 Serratia marcescens MC6001 strain=MC6001 na latest Scaffold Major Full 2013-07-08 S_marcescensMC6001-1.0 The Genome Institute GCA_000418835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/835/GCF_000418835.1_S_marcescensMC6001-1.0/ na na na haploid bacteria 5367622 5361822 59.000000 0 131 189 NCBI RefSeq GCF_000418835.1-RS_2025_09_10 2025-09-10 5253 5084 78 na GCF_000418855.2 PRJNA224116 SAMN02436715 ATOI00000000.1 na 1333583 615 Serratia marcescens MC6000 strain=MC6000 na latest Scaffold Minor Full 2013-07-08 S_marcescensMC6000-1.0 The Genome Institute GCA_000418855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/855/GCF_000418855.2_S_marcescensMC6000-1.0/ na na na haploid bacteria 5327744 5321744 59.500000 0 133 193 NCBI RefSeq GCF_000418855.2-RS_2026_01_06 2026-01-06 5237 5070 80 na GCF_000418875.1 PRJNA224116 SAMN02436894 ATOJ00000000.1 na 1333582 615 Serratia marcescens MC460 strain=MC460 na latest Scaffold Major Full 2013-07-08 S_marcescensMC460-1.0 The Genome Institute GCA_000418875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/875/GCF_000418875.1_S_marcescensMC460-1.0/ na na na haploid bacteria 5371197 5362997 59.000000 0 139 221 NCBI RefSeq GCF_000418875.1-RS_2025_08_03 2025-08-03 5274 5095 79 na GCF_000418895.1 PRJNA224116 SAMN02436762 ATOK00000000.1 na 1333581 615 Serratia marcescens MC459 strain=MC459 na latest Scaffold Major Full 2013-07-08 S_marcescensMC459-1.0 The Genome Institute GCA_000418895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/895/GCF_000418895.1_S_marcescensMC459-1.0/ na na na haploid bacteria 5373060 5367360 59.000000 0 129 186 NCBI RefSeq GCF_000418895.1-RS_2025_09_10 2025-09-10 5262 5092 84 na GCF_000418915.1 PRJNA224116 SAMN02436823 ATOL00000000.1 na 1333580 615 Serratia marcescens MC458 strain=MC458 na latest Scaffold Major Full 2013-07-08 S_marcescensMC458-1.0 The Genome Institute GCA_000418915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/915/GCF_000418915.1_S_marcescensMC458-1.0/ na na na haploid bacteria 5402091 5397991 59.000000 0 156 197 NCBI RefSeq GCF_000418915.1-RS_2025_09_10 2025-09-10 5309 5146 86 na GCF_000418935.1 PRJNA224116 SAMN02436716 ATOM00000000.1 na 1333586 615 Serratia marcescens AB42556419-isolate1 strain=AB42556419-isolate1 na latest Scaffold Major Full 2013-07-08 S_marcescensAB42556419-isolate1-1.0 The Genome Institute GCA_000418935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/935/GCF_000418935.1_S_marcescensAB42556419-isolate1-1.0/ na na na haploid bacteria 5334871 5328671 59.500000 0 117 179 NCBI RefSeq GCF_000418935.1-RS_2025_09_10 2025-09-10 5216 5047 81 na GCF_000418995.1 PRJNA224116 SAMN02469992 ASXT00000000.1 na 1336753 676 Vibrio fluvialis I21563 strain=I21563 na latest Contig Major Full 2013-07-02 ASM41899v1 Institute of Microbial Technology GCA_000418995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/418/995/GCF_000418995.1_ASM41899v1/ na na na haploid bacteria 4371313 4371313 50.000000 0 84 84 NCBI RefSeq GCF_000418995.1-RS_2025_12_21 2025-12-21 4133 3989 75 23895343 GCF_000419015.1 PRJNA224116 SAMN02436824 ATOP00000000.1 na 1333576 1311 Streptococcus agalactiae MC632 strain=MC632 na latest Scaffold Major Full 2013-07-08 S_agalactiaeMC632-1.0 The Genome Institute GCA_000419015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/015/GCF_000419015.1_S_agalactiaeMC632-1.0/ annotation fails completeness check na na haploid bacteria 2037896 2028396 35.000000 0 308 403 NCBI RefSeq GCF_000419015.1-RS_2025_11_24 2025-11-24 2251 1922 26 na GCF_000419055.2 PRJNA224116 SAMN02436825 ATOR00000000.1 na 1333574 1311 Streptococcus agalactiae MC629 strain=MC629 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC629-1.0 The Genome Institute GCA_000419055.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/055/GCF_000419055.2_S_agalactiaeMC629-1.0/ na na na haploid bacteria 2049763 2048863 35.500000 0 34 43 NCBI RefSeq GCF_000419055.2-RS_2026_01_12 2026-01-12 2075 1962 42 na GCF_000419075.2 PRJNA224116 SAMN02436764 ATOS00000000.1 na 1333573 1311 Streptococcus agalactiae MC628 strain=MC628 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC628-1.0 The Genome Institute GCA_000419075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/075/GCF_000419075.2_S_agalactiaeMC628-1.0/ na na na haploid bacteria 2093988 2092988 35.000000 0 50 60 NCBI RefSeq GCF_000419075.2-RS_2026_01_01 2026-01-01 2130 2002 46 na GCF_000419095.2 PRJNA224116 SAMN02436765 ATOT00000000.1 na 1333572 1311 Streptococcus agalactiae MC627 strain=MC627 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC627-1.0 The Genome Institute GCA_000419095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/095/GCF_000419095.2_S_agalactiaeMC627-1.0/ na na na haploid bacteria 2073477 2072277 35.500000 0 117 129 NCBI RefSeq GCF_000419095.2-RS_2026_01_01 2026-01-01 2123 1993 45 na GCF_000419115.2 PRJNA224116 SAMN02436896 ATOU00000000.1 na 1333571 1311 Streptococcus agalactiae MC626 strain=MC626 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC626-1.0 The Genome Institute GCA_000419115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/115/GCF_000419115.2_S_agalactiaeMC626-1.0/ na na na haploid bacteria 2037448 2035848 35.000000 0 59 75 NCBI RefSeq GCF_000419115.2-RS_2025_12_31 2025-12-31 2085 1961 47 na GCF_000419135.2 PRJNA224116 SAMN02436897 ATOV00000000.1 na 1333570 1311 Streptococcus agalactiae MC625 strain=MC625 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC625-1.0 The Genome Institute GCA_000419135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/135/GCF_000419135.2_S_agalactiaeMC625-1.0/ na na na haploid bacteria 2057899 2056799 35.500000 0 40 51 NCBI RefSeq GCF_000419135.2-RS_2025_12_31 2025-12-31 2082 1958 45 na GCF_000419155.2 PRJNA224116 SAMN02436826 ATOW00000000.1 na 1333569 1311 Streptococcus agalactiae MC624 strain=MC624 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC624-1.0 The Genome Institute GCA_000419155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/155/GCF_000419155.2_S_agalactiaeMC624-1.0/ na na na haploid bacteria 2058114 2057414 35.500000 0 37 44 NCBI RefSeq GCF_000419155.2-RS_2025_12_31 2025-12-31 2084 1963 46 na GCF_000419175.2 PRJNA224116 SAMN02436898 ATOX00000000.1 na 1333568 1311 Streptococcus agalactiae MC623 strain=MC623 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC623-1.0 The Genome Institute GCA_000419175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/175/GCF_000419175.2_S_agalactiaeMC623-1.0/ na na na haploid bacteria 2037039 2036539 35.000000 0 36 41 NCBI RefSeq GCF_000419175.2-RS_2025_12_30 2025-12-30 2065 1954 44 na GCF_000419195.2 PRJNA224116 SAMN02436766 ATOY00000000.1 na 1333567 1311 Streptococcus agalactiae MC621 strain=MC621 na latest Scaffold Minor Full 2013-07-08 S_agalactiaeMC621-1.0 The Genome Institute GCA_000419195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/195/GCF_000419195.2_S_agalactiaeMC621-1.0/ na na na haploid bacteria 2049265 2048665 35.500000 0 38 44 NCBI RefSeq GCF_000419195.2-RS_2026_01_12 2026-01-12 2080 1960 43 na GCF_000419215.1 PRJNA224116 SAMN02436767 ATOZ00000000.1 na 1333566 1311 Streptococcus agalactiae GBS12 strain=GBS12 na latest Scaffold Major Full 2013-07-08 S_agalactiaeGBS12-1.0 The Genome Institute GCA_000419215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/215/GCF_000419215.1_S_agalactiaeGBS12-1.0/ na na na haploid bacteria 2048066 2045166 35.500000 0 66 95 NCBI RefSeq GCF_000419215.1-RS_2026_01_23 2026-01-23 2100 1975 29 na GCF_000419235.1 PRJNA224116 SAMN02436827 ATPA00000000.1 na 1333565 1311 Streptococcus agalactiae GBS11 strain=GBS11 na latest Scaffold Major Full 2013-07-08 S_agalactiaeGBS11-1.0 The Genome Institute GCA_000419235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/235/GCF_000419235.1_S_agalactiaeGBS11-1.0/ na na na haploid bacteria 2077516 2076016 35.000000 0 174 189 NCBI RefSeq GCF_000419235.1-RS_2026_01_23 2026-01-23 2181 2029 23 na GCF_000419295.1 PRJNA224116 SAMN02469866 AOPX00000000.1 na 1187065 1187065 Mycobacterium sp. 012931 strain=12931 na latest Contig Major Full 2013-07-08 SP Gyeongsang National University GCA_000419295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/295/GCF_000419295.1_SP/ na na na haploid bacteria 5759365 5759365 65.500000 0 1 1 NCBI RefSeq GCF_000419295.1-RS_2024_08_13 2024-08-13 5134 4576 53 23929466 GCF_000419315.1 PRJNA224116 SAMN02469865 ANPL00000000.1 na 1229516 1781 Mycobacterium marinum str. Europe strain=Europe na latest Contig Major Full 2013-07-08 Europe Gyeongsang National University GCA_000419315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/315/GCF_000419315.1_Europe/ na na na haploid bacteria 6029340 6029340 65.500000 0 4 4 NCBI RefSeq GCF_000419315.1-RS_2025_12_16 2025-12-16 5263 4956 53 na GCF_000419335.1 PRJNA224116 SAMN02469867 ANPM00000000.1 na 1288036 1781 Mycobacterium marinum MB2 strain=MB2 na latest Contig Major Full 2013-07-08 MB2 Gyeongsang National University GCA_000419335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/335/GCF_000419335.1_MB2/ na na na haploid bacteria 6134390 6134390 65.500000 0 3 3 NCBI RefSeq GCF_000419335.1-RS_2025_12_16 2025-12-16 5313 5082 52 na GCF_000419385.1 PRJNA224116 SAMN02604244 na na 1096995 470 Acinetobacter baumannii BJAB07104 strain=BJAB07104 na latest Complete Genome Major Full 2013-07-09 ASM41938v1 University of Texas at Dallas GCA_000419385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/385/GCF_000419385.1_ASM41938v1/ na na na haploid bacteria 4042229 4042229 39.000000 3 3 3 NCBI RefSeq GCF_000419385.1-RS_2025_04_20 2025-04-20 3906 3713 96 23826102 GCF_000419405.1 PRJNA224116 SAMN02604245 na na 1096996 470 Acinetobacter baumannii BJAB0715 strain=BJAB0715 na latest Complete Genome Major Full 2013-07-09 ASM41940v1 University of Texas at Dallas GCA_000419405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/405/GCF_000419405.1_ASM41940v1/ na na na haploid bacteria 4053889 4053889 39.000000 2 2 2 NCBI RefSeq GCF_000419405.1-RS_2025_04_20 2025-04-20 3922 3732 97 23826102 GCF_000419425.1 PRJNA224116 SAMN02604246 na na 1096997 470 Acinetobacter baumannii BJAB0868 strain=BJAB0868 na latest Complete Genome Major Full 2013-07-09 ASM41942v1 University of Texas at Dallas GCA_000419425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/425/GCF_000419425.1_ASM41942v1/ na na na haploid bacteria 4005822 4005822 39.000000 4 4 4 NCBI RefSeq GCF_000419425.1-RS_2025_04_22 2025-04-22 3845 3648 97 23826102 GCF_000419445.1 PRJNA224116 SAMN02441141 AULK00000000.1 reference genome 1121372 444608 Gryllotalpicola ginsengisoli DSM 22003 strain=DSM 22003 na latest Scaffold Major Full 2013-07-09 ASM41944v1 DOE Joint Genome Institute GCA_000419445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/445/GCF_000419445.1_ASM41944v1/ na assembly from type material na haploid bacteria 2944984 2944974 71.000000 0 23 24 NCBI RefSeq GCF_000419445.1-RS_2025_12_09 2025-12-09 2830 2750 56 na GCF_000419525.1 PRJNA224116 SAMN02440559 ATTE00000000.1 reference genome 998674 45248 Leucothrix mucor DSM 2157 strain=DSM 2157 na latest Contig Major Full 2013-07-09 ASM41952v1 JGI GCA_000419525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/525/GCF_000419525.1_ASM41952v1/ na assembly from type material na haploid bacteria 5185674 5185674 48.000000 0 2 2 NCBI RefSeq GCF_000419525.1-RS_2026_05_02 2026-05-02 4729 4634 74 na GCF_000419565.1 PRJNA224116 SAMN02441600 ATTG00000000.1 na 1090317 152682 Sphingomonas melonis FR1 strain=FR1 na latest Contig Major Full 2013-07-09 ASM41956v1 JGI GCA_000419565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/565/GCF_000419565.1_ASM41956v1/ na na na haploid bacteria 4047966 4047966 67.000000 0 5 5 NCBI RefSeq GCF_000419565.1-RS_2026_02_08 2026-02-08 3909 3803 59 na GCF_000419585.1 PRJNA224116 SAMN02441591 ATTH00000000.1 reference genome 1089550 503170 Salisaeta longa DSM 21114 strain=DSM 21114 na latest Contig Major Full 2013-07-09 ASM41958v1 JGI GCA_000419585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/585/GCF_000419585.1_ASM41958v1/ na assembly from type material na haploid bacteria 3399024 3399024 63.500000 0 3 3 NCBI RefSeq GCF_000419585.1-RS_2025_12_09 2025-12-09 2783 2719 53 na GCF_000419605.1 PRJNA224116 SAMN02441592 ATTI00000000.1 na 1090318 257003 Sphingomonas phyllosphaerae 5.2 strain=5.2 na latest Contig Major Full 2013-07-09 ASM41960v1 JGI GCA_000419605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/605/GCF_000419605.1_ASM41960v1/ na na na haploid bacteria 3920967 3920967 67.000000 0 2 2 NCBI RefSeq GCF_000419605.1-RS_2025_03_13 2025-03-13 3647 3518 64 na GCF_000419625.1 PRJNA224116 SAMN02441593 ATTJ00000000.1 na 317577 317577 Deinococcus ficus strain=2009 na latest Contig Major Full 2013-07-09 ASM41962v1 JGI GCA_000419625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/625/GCF_000419625.1_ASM41962v1/ na na na haploid bacteria 4019382 4019382 69.500000 0 6 6 NCBI RefSeq GCF_000419625.1-RS_2026_01_15 2026-01-15 3895 3797 68 na GCF_000419645.1 PRJNA224116 SAMN02440921 ATTK00000000.1 na 1041155 382 Sinorhizobium meliloti MVII-I strain=MVII-I na latest Contig Major Full 2013-07-09 ASM41964v1 DOE Joint Genome Institute GCA_000419645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/645/GCF_000419645.1_ASM41964v1/ na na na haploid bacteria 7265287 7265287 62.000000 0 220 220 NCBI RefSeq GCF_000419645.1-RS_2026_01_15 2026-01-15 7178 6713 59 na GCF_000419665.1 PRJNA224116 SAMN02441594 ATTL00000000.1 na 1041148 110321 Sinorhizobium medicae DI28 strain=DI28 na latest Contig Major Full 2013-07-09 ASM41966v1 DOE Joint Genome Institute GCA_000419665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/665/GCF_000419665.1_ASM41966v1/ na na na haploid bacteria 6553624 6553624 61.000000 0 104 104 NCBI RefSeq GCF_000419665.1-RS_2026_01_15 2026-01-15 6379 6036 59 na GCF_000419685.1 PRJNA224116 SAMN02441252 ATTM00000000.1 reference genome 1111730 271155 Flavobacterium antarcticum DSM 19726 strain=DSM 19726 na latest Contig Major Full 2013-07-09 ASM41968v1 DOE Joint Genome Institute GCA_000419685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/685/GCF_000419685.1_ASM41968v1/ na assembly from type material na haploid bacteria 3079036 3079036 35.000000 0 15 15 NCBI RefSeq GCF_000419685.1-RS_2025_11_22 2025-11-22 2787 2727 47 na GCF_000419705.1 PRJNA224116 SAMN02441595 ATTN00000000.1 na 1041140 384 Rhizobium leguminosarum bv. phaseoli FA23 strain=FA23 na latest Contig Major Full 2013-07-09 ASM41970v1 DOE Joint Genome Institute GCA_000419705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/705/GCF_000419705.1_ASM41970v1/ na na na haploid bacteria 7545552 7545552 61.000000 0 66 66 NCBI RefSeq GCF_000419705.1-RS_2025_06_10 2025-06-10 7320 7048 56 na GCF_000419725.1 PRJNA224116 SAMN02440560 ATTO00000000.1 na 348824 348824 Rhizobium favelukesii strain=OR191 na latest Contig Major Full 2013-07-09 ASM41972v1 DOE Joint Genome Institute GCA_000419725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/725/GCF_000419725.1_ASM41972v1/ na na na haploid bacteria 7368160 7368160 59.500000 0 240 240 NCBI RefSeq GCF_000419725.1-RS_2026_04_29 2026-04-29 7486 6795 56 na GCF_000419765.1 PRJNA224116 SAMN02440561 ATTQ00000000.1 na 1079460 57676 Rhizobium mongolense USDA 1844 strain=USDA 1844 na latest Contig Major Full 2013-07-09 ASM41976v1 DOE Joint Genome Institute GCA_000419765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/765/GCF_000419765.1_ASM41976v1/ na assembly from type material na haploid bacteria 7166346 7166346 59.500000 0 96 96 NCBI RefSeq GCF_000419765.1-RS_2026_04_29 2026-04-29 7139 6600 56 na GCF_000419785.1 PRJNA224116 SAMN02440912 ATTR00000000.1 na 1041150 110321 Sinorhizobium medicae WSM244 strain=WSM244 na latest Contig Major Full 2013-07-09 ASM41978v1 DOE Joint Genome Institute GCA_000419785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/419/785/GCF_000419785.1_ASM41978v1/ na na na haploid bacteria 6650282 6650282 61.000000 0 91 91 NCBI RefSeq GCF_000419785.1-RS_2026_03_31 2026-03-31 6407 6114 56 26664655 GCF_000420025.1 PRJNA224116 SAMN02440564 ATUD00000000.1 reference genome 1122939 588672 Patulibacter americanus DSM 16676 strain=DSM 16676 na latest Contig Major Full 2013-07-09 ASM42002v1 DOE Joint Genome Institute GCA_000420025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/025/GCF_000420025.1_ASM42002v1/ na assembly from type material na haploid bacteria 4470560 4470560 74.500000 0 32 32 NCBI RefSeq GCF_000420025.1-RS_2026_05_02 2026-05-02 4170 4084 54 na GCF_000420045.1 PRJNA224116 SAMN02440565 ATUE00000000.1 reference genome 1122951 392589 Perlucidibaca piscinae DSM 21586 strain=DSM 21586 na latest Contig Major Full 2013-07-09 ASM42004v1 DOE Joint Genome Institute GCA_000420045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/045/GCF_000420045.1_ASM42004v1/ na assembly from type material na haploid bacteria 2424065 2424065 65.000000 0 13 13 NCBI RefSeq GCF_000420045.1-RS_2025_12_09 2025-12-09 2392 2313 55 na GCF_000420065.1 PRJNA224116 SAMN02440916 ATUF00000000.1 reference genome 1123488 184870 Varibaculum cambriense DSM 15806 strain=DSM 15806 na latest Contig Major Full 2013-07-09 ASM42006v1 DOE Joint Genome Institute GCA_000420065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/065/GCF_000420065.1_ASM42006v1/ na assembly from type material na haploid bacteria 2022936 2022936 53.500000 0 10 10 NCBI RefSeq GCF_000420065.1-RS_2026_03_12 2026-03-12 1756 1685 56 na GCF_000420085.1 PRJNA224116 SAMN02440566 ATUG00000000.1 reference genome 1265505 53329 Desulfospira joergensenii DSM 10085 strain=DSM 10085 na latest Contig Major Full 2013-07-09 ASM42008v1 DOE Joint Genome Institute GCA_000420085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/085/GCF_000420085.1_ASM42008v1/ na assembly from type material na haploid bacteria 6119470 6119470 50.500000 0 6 6 NCBI RefSeq GCF_000420085.1-RS_2026_04_21 2026-04-21 5499 5414 57 na GCF_000420105.1 PRJNA224116 SAMN02441597 ATUH00000000.1 na 1266996 2121 Metamycoplasma orale ATCC 23714 strain=ATCC 23714 na latest Contig Major Full 2013-07-09 ASM42010v1 DOE Joint Genome Institute GCA_000420105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/105/GCF_000420105.1_ASM42010v1/ na assembly from type material na haploid bacteria 710549 710549 25.500000 0 21 21 NCBI RefSeq GCF_000420105.1-RS_2025_04_05 2025-04-05 638 586 39 na GCF_000420125.1 PRJNA224116 SAMN02440917 ATUI00000000.1 reference genome 987059 316997 Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 strain=JA2 na latest Contig Major Full 2013-07-09 ASM42012v1 DOE Joint Genome Institute GCA_000420125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/125/GCF_000420125.1_ASM42012v1/ na assembly from type material na haploid bacteria 4160065 4160065 71.500000 0 58 58 NCBI RefSeq GCF_000420125.1-RS_2025_08_06 2025-08-06 3897 3818 55 na GCF_000420145.1 PRJNA224116 SAMN02441598 ATUJ00000000.1 reference genome 1266998 187400 Paracoccus zeaxanthinifaciens ATCC 21588 strain=ATCC 21588 na latest Contig Major Full 2013-07-09 ASM42014v1 DOE Joint Genome Institute GCA_000420145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/145/GCF_000420145.1_ASM42014v1/ na assembly from type material na haploid bacteria 3049695 3049695 67.000000 0 35 35 NCBI RefSeq GCF_000420145.1-RS_2026_05_02 2026-05-02 3019 2921 56 na GCF_000420165.1 PRJNA224116 SAMN02440567 ATUK00000000.1 na 1266914 1266914 Thioalkalivibrio sp. AKL19 strain=AKL19 na latest Contig Major Full 2013-07-09 ASM42016v1 DOE Joint Genome Institute GCA_000420165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/165/GCF_000420165.1_ASM42016v1/ na na na haploid bacteria 2884909 2884909 67.000000 0 18 18 NCBI RefSeq GCF_000420165.1-RS_2024_08_13 2024-08-13 2739 2641 55 na GCF_000420185.1 PRJNA224116 SAMN02440568 ATUL00000000.1 na 1269813 1269813 Thioalkalivibrio sp. ALR17-21 strain=ALR17-21 na latest Contig Major Full 2013-07-09 ASM42018v1 DOE Joint Genome Institute GCA_000420185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/185/GCF_000420185.1_ASM42018v1/ na na na haploid bacteria 2998957 2998957 67.500000 0 65 65 NCBI RefSeq GCF_000420185.1-RS_2024_08_13 2024-08-13 2910 2807 53 na GCF_000420205.1 PRJNA224116 SAMN02440918 ATUM00000000.1 na 1121088 1398 Heyndrickxia coagulans DSM 1 = ATCC 7050 strain=ATCC 7050 na latest Contig Major Full 2013-07-09 ASM42020v1 DOE Joint Genome Institute GCA_000420205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/205/GCF_000420205.1_ASM42020v1/ na assembly from type material na haploid bacteria 2947823 2947823 47.500000 0 170 170 NCBI RefSeq GCF_000420205.1-RS_2025_08_26 2025-08-26 3033 2819 84 na GCF_000420245.1 PRJNA224116 SAMN02440919 ATUO00000000.1 reference genome 1278302 211669 Psychromonas hadalis ATCC BAA-638 strain=ATCC BAA-638 na latest Contig Major Full 2013-07-09 ASM42024v1 DOE Joint Genome Institute GCA_000420245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/245/GCF_000420245.1_ASM42024v1/ na assembly from type material na haploid bacteria 3979980 3979980 39.000000 0 351 351 NCBI RefSeq GCF_000420245.1-RS_2026_05_02 2026-05-02 3776 3573 49 na GCF_000420265.1 PRJNA224116 SAMN02440569 ATUP00000000.1 reference genome 1122613 153233 Oceanicaulis alexandrii DSM 11625 strain=DSM 11625 na latest Contig Major Full 2013-07-09 ASM42026v1 DOE Joint Genome Institute GCA_000420265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/265/GCF_000420265.1_ASM42026v1/ na assembly from type material na haploid bacteria 3018426 3018426 62.500000 0 4 4 NCBI RefSeq GCF_000420265.1-RS_2025_12_10 2025-12-10 2881 2824 49 na GCF_000420285.1 PRJNA224116 SAMN02440904 ATUQ00000000.1 reference genome 1117647 447471 Simiduia agarivorans SA1 = DSM 21679 strain=DSM 21679 na latest Scaffold Major Full 2013-07-09 ASM42028v1 DOE Joint Genome Institute GCA_000420285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/285/GCF_000420285.1_ASM42028v1/ na assembly from type material na haploid bacteria 4274427 4274417 56.000000 0 29 30 NCBI RefSeq GCF_000420285.1-RS_2026_03_30 2026-03-30 3843 3788 47 na GCF_000420305.1 PRJNA224116 SAMN02441583 ATUR00000000.1 reference genome 1123270 279369 Novosphingopyxis baekryungensis DSM 16222 strain=DSM 16222 na latest Contig Major Full 2013-07-09 ASM42030v1 DOE Joint Genome Institute GCA_000420305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/305/GCF_000420305.1_ASM42030v1/ na assembly from type material na haploid bacteria 3068208 3068208 62.500000 0 10 10 NCBI RefSeq GCF_000420305.1-RS_2026_05_02 2026-05-02 2963 2885 59 na GCF_000420325.1 PRJNA224116 SAMN02440570 ATUS00000000.1 reference genome 1123279 454602 Spongiibacter tropicus DSM 19543 strain=DSM 19543 na latest Scaffold Major Full 2013-07-09 ASM42032v1 DOE Joint Genome Institute GCA_000420325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/325/GCF_000420325.1_ASM42032v1/ na assembly from type material na haploid bacteria 3947342 3947332 57.500000 0 7 8 NCBI RefSeq GCF_000420325.1-RS_2026_05_02 2026-05-02 3720 3668 45 na GCF_000420345.1 PRJNA224116 SAMN02440905 ATUT00000000.1 na 1123313 1323 Faecalicoccus pleomorphus DSM 20574 strain=DSM 20574 na latest Contig Major Full 2013-07-09 ASM42034v1 DOE Joint Genome Institute GCA_000420345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/345/GCF_000420345.1_ASM42034v1/ na assembly from type material na haploid bacteria 1992636 1992636 39.000000 0 47 47 NCBI RefSeq GCF_000420345.1-RS_2026_04_07 2026-04-07 2076 1998 55 na GCF_000420365.1 PRJNA224116 SAMN02440571 ATUU00000000.1 reference genome 1123500 1615 Weissella halotolerans DSM 20190 strain=DSM 20190 na latest Scaffold Major Full 2013-07-09 ASM42036v1 DOE Joint Genome Institute GCA_000420365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/365/GCF_000420365.1_ASM42036v1/ na assembly from type material na haploid bacteria 1358385 1358365 43.000000 0 6 8 NCBI RefSeq GCF_000420365.1-RS_2026_03_17 2026-03-17 1390 1303 77 na GCF_000420385.1 PRJNA224116 SAMN02440906 ATUV00000000.1 reference genome 944480 1279027 Hippea alviniae EP5-r strain=EP5-r na latest Contig Major Full 2013-07-09 ASM42038v1 DOE Joint Genome Institute GCA_000420385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/385/GCF_000420385.1_ASM42038v1/ na assembly from type material na haploid bacteria 1749386 1749386 37.000000 0 4 4 NCBI RefSeq GCF_000420385.1-RS_2026_03_21 2026-03-21 1824 1753 58 na GCF_000420405.1 PRJNA224116 SAMN02441245 ATUW00000000.1 reference genome 1120945 33007 Winkia neuii subsp. neuii DSM 8576 strain=DSM 8576 na latest Contig Major Full 2013-07-09 ASM42040v1 DOE Joint Genome Institute GCA_000420405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/405/GCF_000420405.1_ASM42040v1/ na assembly from type material na haploid bacteria 2270293 2270293 56.000000 0 29 29 NCBI RefSeq GCF_000420405.1-RS_2026_04_23 2026-04-23 2051 1974 59 na GCF_000420425.1 PRJNA224116 SAMN02441246 ATUX00000000.1 reference genome 1120947 183916 Schaalia vaccimaxillae DSM 15804 strain=DSM 15804 na latest Contig Major Full 2013-07-09 ASM42042v1 DOE Joint Genome Institute GCA_000420425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/425/GCF_000420425.1_ASM42042v1/ na assembly from type material na haploid bacteria 2338426 2338426 57.500000 0 13 13 NCBI RefSeq GCF_000420425.1-RS_2026_04_16 2026-04-16 2086 2011 58 na GCF_000420445.1 PRJNA224116 SAMN02441584 ATUY00000000.1 reference genome 1120933 190146 Actinotignum urinale DSM 15805 strain=DSM 15805 na latest Scaffold Major Full 2013-07-09 ASM42044v1 DOE Joint Genome Institute GCA_000420445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/445/GCF_000420445.1_ASM42044v1/ na assembly from type material na haploid bacteria 1920341 1920321 51.000000 0 29 31 NCBI RefSeq GCF_000420445.1-RS_2025_12_10 2025-12-10 1720 1643 54 na GCF_000420465.1 PRJNA224116 SAMN02440572 ATUZ00000000.1 na 1121445 876 Desulfovibrio desulfuricans DSM 642 strain=DSM 642 na latest Contig Major Full 2013-07-09 ASM42046v1 DOE Joint Genome Institute GCA_000420465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/465/GCF_000420465.1_ASM42046v1/ na assembly from type material na haploid bacteria 3391683 3391683 57.500000 0 20 20 NCBI RefSeq GCF_000420465.1-RS_2026_05_02 2026-05-02 2924 2845 61 na GCF_000420485.1 PRJNA224116 SAMN02441247 ATVA00000000.1 reference genome 1121456 889 Paucidesulfovibrio longus DSM 6739 strain=DSM 6739 na latest Scaffold Major Full 2013-07-09 ASM42048v1 DOE Joint Genome Institute GCA_000420485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/485/GCF_000420485.1_ASM42048v1/ na assembly from type material na haploid bacteria 3701832 3701822 63.500000 0 19 20 NCBI RefSeq GCF_000420485.1-RS_2025_12_10 2025-12-10 3458 3388 58 na GCF_000420505.1 PRJNA224116 SAMN02441248 ATVB00000000.1 reference genome 1120979 419015 Alloscardovia omnicolens DSM 21503 strain=DSM 21503 na latest Contig Major Full 2013-07-09 ASM42050v1 DOE Joint Genome Institute GCA_000420505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/505/GCF_000420505.1_ASM42050v1/ na assembly from type material na haploid bacteria 1847146 1847146 46.500000 0 43 43 NCBI RefSeq GCF_000420505.1-RS_2026_03_30 2026-03-30 1620 1532 58 na GCF_000420525.1 PRJNA224116 SAMN02440573 ATVC00000000.1 reference genome 1121004 190 Aquaspirillum serpens DSM 68 strain=DSM 68 na latest Contig Major Full 2013-07-09 ASM42052v1 DOE Joint Genome Institute GCA_000420525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/525/GCF_000420525.1_ASM42052v1/ na assembly from type material na haploid bacteria 2612795 2612795 50.000000 0 119 119 NCBI RefSeq GCF_000420525.1-RS_2025_09_02 2025-09-02 2566 2460 60 na GCF_000420545.1 PRJNA224116 SAMN02441585 ATVD00000000.1 reference genome 1121015 498055 Arenimonas oryziterrae DSM 21050 = YC6267 strain=DSM 21050 na latest Contig Major Full 2013-07-09 ASM42054v1 DOE Joint Genome Institute GCA_000420545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/545/GCF_000420545.1_ASM42054v1/ na assembly from type material na haploid bacteria 3091755 3091755 65.500000 0 25 25 NCBI RefSeq GCF_000420545.1-RS_2026_05_02 2026-05-02 2960 2884 56 na GCF_000420565.1 PRJNA224116 SAMN02441586 ATVE00000000.1 reference genome 1121108 1692 Bifidobacterium magnum DSM 20222 strain=DSM 20222 na latest Contig Major Full 2013-07-09 ASM42056v1 DOE Joint Genome Institute GCA_000420565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/565/GCF_000420565.1_ASM42056v1/ na assembly from type material na haploid bacteria 1825255 1825255 58.500000 0 22 22 NCBI RefSeq GCF_000420565.1-RS_2026_04_26 2026-04-26 1603 1506 70 na GCF_000420585.1 PRJNA224116 SAMN02441249 ATVF00000000.1 na 1121353 1721 Corynebacterium callunae DSM 20147 strain=DSM 20147 na latest Contig Major Full 2013-07-09 ASM42058v1 DOE Joint Genome Institute GCA_000420585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/585/GCF_000420585.1_ASM42058v1/ na assembly from type material na haploid bacteria 2885106 2885106 52.500000 0 26 26 NCBI RefSeq GCF_000420585.1-RS_2026_05_16 2026-05-16 2748 2632 72 na GCF_000420605.1 PRJNA224116 SAMN02441587 ATVG00000000.1 na 1121364 441501 Corynebacterium massiliense DSM 45435 strain=DSM 45435 na latest Scaffold Major Full 2013-07-09 ASM42060v1 DOE Joint Genome Institute GCA_000420605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/605/GCF_000420605.1_ASM42060v1/ na assembly from type material na haploid bacteria 2183019 2183009 65.000000 0 26 27 NCBI RefSeq GCF_000420605.1-RS_2026_03_31 2026-03-31 2047 1941 62 na GCF_000420625.1 PRJNA224116 SAMN02441250 ATVH00000000.1 reference genome 570952 1121832 Fodinicurvata sediminis DSM 21159 strain=DSM 21159 na latest Contig Major Full 2013-07-09 ASM42062v1 DOE Joint Genome Institute GCA_000420625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/625/GCF_000420625.1_ASM42062v1/ na assembly from type material na haploid bacteria 3690548 3690548 60.500000 0 20 20 NCBI RefSeq GCF_000420625.1-RS_2025_07_21 2025-07-21 3524 3452 57 na GCF_000420645.1 PRJNA224116 SAMN02440574 ATVI00000000.1 reference genome 1122603 64002 Nevskia ramosa DSM 11499 strain=DSM 11499 na latest Contig Major Full 2013-07-09 ASM42064v1 DOE Joint Genome Institute GCA_000420645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/645/GCF_000420645.1_ASM42064v1/ na assembly from type material na haploid bacteria 4515285 4515285 64.500000 0 13 13 NCBI RefSeq GCF_000420645.1-RS_2025_07_15 2025-07-15 4095 4018 59 na GCF_000420665.1 PRJNA224116 SAMN02441235 ATVJ00000000.1 reference genome 551789 1123045 Ponticaulis koreensis DSM 19734 strain=DSM 19734 na latest Scaffold Major Full 2013-07-09 ASM42066v1 DOE Joint Genome Institute GCA_000420665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/665/GCF_000420665.1_ASM42066v1/ na assembly from type material na haploid bacteria 3400379 3400369 55.000000 0 6 7 NCBI RefSeq GCF_000420665.1-RS_2025_12_09 2025-12-09 3386 3330 48 na GCF_000420685.1 PRJNA224116 SAMN02440575 ATVK00000000.1 na 1121927 53427 Gordonia hirsuta DSM 44140 = NBRC 16056 strain=DSM 44140 na latest Contig Major Full 2013-07-09 ASM42068v1 DOE Joint Genome Institute GCA_000420685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/685/GCF_000420685.1_ASM42068v1/ na assembly from type material na haploid bacteria 3489460 3489460 68.500000 0 77 77 NCBI RefSeq GCF_000420685.1-RS_2026_05_16 2026-05-16 3262 3147 57 na GCF_000420705.1 PRJNA224116 SAMN02441588 ATVL00000000.1 reference genome 1121957 223903 Hymenobacter norwichensis DSM 15439 strain=DSM 15439 na latest Scaffold Major Full 2013-07-09 ASM42070v1 DOE Joint Genome Institute GCA_000420705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/705/GCF_000420705.1_ASM42070v1/ na assembly from type material na haploid bacteria 6008309 6008269 56.500000 0 14 18 NCBI RefSeq GCF_000420705.1-RS_2026_05_02 2026-05-02 4981 4903 54 na GCF_000420725.1 PRJNA224116 SAMN02440907 ATVM00000000.1 reference genome 1122203 301092 Marinococcus halotolerans DSM 16375 strain=DSM 16375 na latest Contig Major Full 2013-07-09 ASM42072v1 DOE Joint Genome Institute GCA_000420725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/725/GCF_000420725.1_ASM42072v1/ na assembly from type material na haploid bacteria 3139679 3139679 48.000000 0 56 56 NCBI RefSeq GCF_000420725.1-RS_2026_05_02 2026-05-02 3268 3173 66 na GCF_000420745.1 PRJNA224116 SAMN02441236 ATVN00000000.1 reference genome 1123027 77008 Pseudorhodobacter ferrugineus DSM 5888 strain=DSM 5888 na latest Contig Major Full 2013-07-09 ASM42074v1 DOE Joint Genome Institute GCA_000420745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/745/GCF_000420745.1_ASM42074v1/ na assembly from type material na haploid bacteria 3430274 3430274 58.500000 0 42 42 NCBI RefSeq GCF_000420745.1-RS_2026_04_26 2026-04-26 3458 3338 46 na GCF_000420765.1 PRJNA224116 SAMN02441589 ATVO00000000.1 reference genome 1123240 210512 Sandarakinorhabdus limnophila DSM 17366 strain=DSM 17366 na latest Contig Major Full 2013-07-09 ASM42076v1 DOE Joint Genome Institute GCA_000420765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/765/GCF_000420765.1_ASM42076v1/ na assembly from type material na haploid bacteria 2613739 2613739 64.500000 0 11 11 NCBI RefSeq GCF_000420765.1-RS_2026_03_12 2026-03-12 2595 2515 50 na GCF_000420785.1 PRJNA224116 SAMN02440576 ATVP00000000.1 reference genome 1123305 149015 Streptococcus hyovaginalis DSM 12219 strain=DSM 12219 na latest Scaffold Major Full 2013-07-09 ASM42078v1 DOE Joint Genome Institute GCA_000420785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/785/GCF_000420785.1_ASM42078v1/ na assembly from type material na haploid bacteria 2077809 2077789 40.000000 0 37 39 NCBI RefSeq GCF_000420785.1-RS_2026_05_02 2026-05-02 2085 1954 47 na GCF_000420805.1 PRJNA224116 SAMN02440577 ATVQ00000000.1 reference genome 1123507 225453 Yaniella halotolerans DSM 15476 strain=DSM 15476 na latest Contig Major Full 2013-07-09 ASM42080v1 DOE Joint Genome Institute GCA_000420805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/805/GCF_000420805.1_ASM42080v1/ na assembly from type material na haploid bacteria 2775456 2775456 55.500000 0 6 6 NCBI RefSeq GCF_000420805.1-RS_2025_12_09 2025-12-09 2617 2536 56 na GCF_000420825.1 PRJNA224116 SAMN02440908 ATVR00000000.1 na 1280663 1280663 Butyrivibrio sp. AE2015 strain=AE2015 na latest Contig Major Full 2013-07-09 ASM42082v1 DOE Joint Genome Institute GCA_000420825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/825/GCF_000420825.1_ASM42082v1/ na na na haploid bacteria 3711555 3711555 40.000000 0 73 73 NCBI RefSeq GCF_000420825.1-RS_2025_08_25 2025-08-25 3229 3148 61 na GCF_000420845.1 PRJNA224116 SAMN02440909 ATVS00000000.1 na 1280666 1280666 Butyrivibrio sp. AE3009 strain=AE3009 na latest Contig Major Full 2013-07-09 ASM42084v1 DOE Joint Genome Institute GCA_000420845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/845/GCF_000420845.1_ASM42084v1/ na na na haploid bacteria 4218197 4218197 44.500000 0 103 103 NCBI RefSeq GCF_000420845.1-RS_2025_08_27 2025-08-27 3620 3498 79 na GCF_000420865.1 PRJNA224116 SAMN02440910 ATVT00000000.1 na 1280668 1280668 Butyrivibrio sp. XPD2006 strain=XPD2006 na latest Contig Major Full 2013-07-09 ASM42086v1 DOE Joint Genome Institute GCA_000420865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/865/GCF_000420865.1_ASM42086v1/ na na na haploid bacteria 3888106 3888106 43.500000 0 31 31 NCBI RefSeq GCF_000420865.1-RS_2025_08_25 2025-08-25 3517 3425 61 na GCF_000420885.1 PRJNA224116 SAMN02441590 ATVU00000000.1 na 1280669 1280669 Dorea sp. AGR2135 strain=AGR2135 na latest Contig Major Full 2013-07-09 ASM42088v1 DOE Joint Genome Institute GCA_000420885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/885/GCF_000420885.1_ASM42088v1/ na na na haploid bacteria 3509498 3509498 40.500000 0 73 73 NCBI RefSeq GCF_000420885.1-RS_2025_08_25 2025-08-25 3563 3340 65 na GCF_000420905.1 PRJNA224116 SAMN02441237 ATVV00000000.1 na 1280670 1280670 Butyrivibrio sp. AD3002 strain=AD3002 na latest Contig Major Full 2013-07-09 ASM42090v1 DOE Joint Genome Institute GCA_000420905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/905/GCF_000420905.1_ASM42090v1/ na na na haploid bacteria 4316529 4316529 42.000000 0 73 73 NCBI RefSeq GCF_000420905.1-RS_2025_08_25 2025-08-25 3955 3836 68 na GCF_000420945.1 PRJNA224116 SAMN02441238 ATVX00000000.1 na 1280679 1280679 Butyrivibrio sp. VCB2006 strain=VCB2006 na latest Contig Major Full 2013-07-09 ASM42094v1 DOE Joint Genome Institute GCA_000420945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/945/GCF_000420945.1_ASM42094v1/ na na na haploid bacteria 3947728 3947728 41.000000 0 40 40 NCBI RefSeq GCF_000420945.1-RS_2025_08_25 2025-08-25 3475 3369 69 na GCF_000420965.1 PRJNA224116 SAMN02441576 ATVY00000000.1 na 1280696 831 Butyrivibrio fibrisolvens ND3005 strain=ND3005 na latest Contig Major Full 2013-07-09 ASM42096v1 DOE Joint Genome Institute GCA_000420965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/965/GCF_000420965.1_ASM42096v1/ na na na haploid bacteria 4461744 4461744 39.500000 0 160 160 NCBI RefSeq GCF_000420965.1-RS_2025_03_21 2025-03-21 3796 3678 58 na GCF_000420985.1 PRJNA224116 SAMN02441239 ATVZ00000000.1 na 1280697 831 Butyrivibrio fibrisolvens AB2020 strain=AB2020 na latest Contig Major Full 2013-07-09 ASM42098v1 DOE Joint Genome Institute GCA_000420985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/985/GCF_000420985.1_ASM42098v1/ na na na haploid bacteria 4735565 4735565 40.000000 0 170 170 NCBI RefSeq GCF_000420985.1-RS_2025_03_21 2025-03-21 4023 3895 64 na GCF_000421025.1 PRJNA224116 SAMN02440897 ATWB00000000.1 na 877445 140626 Lachnobacterium bovis NK4B19 strain=NK4B19 na latest Contig Major Full 2013-07-09 ASM42102v1 DOE Joint Genome Institute GCA_000421025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/025/GCF_000421025.1_ASM42102v1/ na na na haploid bacteria 2514800 2514800 31.000000 0 130 130 NCBI RefSeq GCF_000421025.1-RS_2025_03_21 2025-03-21 2339 2248 44 na GCF_000421105.1 PRJNA224116 SAMN02441578 ATWF00000000.1 reference genome 1304888 1304888 Limisalsivibrio acetivorans strain=L21-Ace-BES na latest Scaffold Major Full 2013-07-09 ASM42110v1 DOE Joint Genome Institute GCA_000421105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/105/GCF_000421105.1_ASM42110v1/ na assembly from type material na haploid bacteria 2971658 2971648 48.500000 0 4 5 NCBI RefSeq GCF_000421105.1-RS_2026_05_26 2026-05-26 2765 2707 48 na GCF_000421145.1 PRJNA224116 SAMN02440580 ATWH00000000.1 reference genome 1121924 501023 Glaciibacter superstes DSM 21135 strain=DSM 21135 na latest Scaffold Major Full 2013-07-09 ASM42114v1 DOE Joint Genome Institute GCA_000421145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/145/GCF_000421145.1_ASM42114v1/ na assembly from type material na haploid bacteria 4802534 4802524 64.500000 0 38 39 NCBI RefSeq GCF_000421145.1-RS_2026_05_02 2026-05-02 4613 4475 63 na GCF_000421165.1 PRJNA224116 SAMN02440900 ATWI00000000.1 reference genome 1122197 262077 Marinobacter daepoensis DSM 16072 strain=DSM 16072 na latest Scaffold Major Full 2013-07-09 ASM42116v1 DOE Joint Genome Institute GCA_000421165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/165/GCF_000421165.1_ASM42116v1/ na assembly from type material na haploid bacteria 3830061 3830021 57.000000 0 16 20 NCBI RefSeq GCF_000421165.1-RS_2026_03_30 2026-03-30 3549 3476 58 na GCF_000421185.1 PRJNA224116 SAMN02441240 ATWJ00000000.1 reference genome 1122622 384677 Ornithinimicrobium pekingense DSM 21552 strain=DSM 21552 na latest Scaffold Major Full 2013-07-09 ASM42118v1 DOE Joint Genome Institute GCA_000421185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/185/GCF_000421185.1_ASM42118v1/ na assembly from type material na haploid bacteria 3852644 3852634 73.000000 0 15 16 NCBI RefSeq GCF_000421185.1-RS_2026_03_21 2026-03-21 3599 3519 55 na GCF_000421205.1 PRJNA224116 SAMN02440901 ATWK00000000.1 na 1122982 28129 Prevotella denticola DSM 20614 = JCM 13449 strain=DSM 20614 na latest Scaffold Major Full 2013-07-09 ASM42120v1 DOE Joint Genome Institute GCA_000421205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/205/GCF_000421205.1_ASM42120v1/ na assembly from type material na haploid bacteria 3056806 3056796 50.000000 0 57 58 NCBI RefSeq GCF_000421205.1-RS_2026_03_30 2026-03-30 2478 2364 54 na GCF_000421225.1 PRJNA224116 SAMN02440902 ATWL00000000.1 reference genome 1123065 366586 Ruania albidiflava DSM 18029 strain=DSM 18029 na latest Contig Major Full 2013-07-09 ASM42122v1 DOE Joint Genome Institute GCA_000421225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/225/GCF_000421225.1_ASM42122v1/ na assembly from type material na haploid bacteria 4174923 4174923 70.000000 0 60 60 NCBI RefSeq GCF_000421225.1-RS_2026_05_02 2026-05-02 3894 3778 58 na GCF_000421245.1 PRJNA224116 SAMN02441241 ATWM00000000.1 reference genome 1123251 247333 Serinicoccus marinus DSM 15273 strain=DSM 15273 na latest Contig Major Full 2013-07-09 ASM42124v1 DOE Joint Genome Institute GCA_000421245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/245/GCF_000421245.1_ASM42124v1/ na assembly from type material na haploid bacteria 3396505 3396505 72.000000 0 29 29 NCBI RefSeq GCF_000421245.1-RS_2026_03_21 2026-03-21 3301 3169 56 na GCF_000421265.1 PRJNA224116 SAMN02440903 ATWN00000000.1 reference genome 1123365 168935 Thalassospira lucentensis MCCC 1A00383 = DSM 14000 strain=DSM 14000 na latest Contig Major Full 2013-07-09 ASM42126v1 DOE Joint Genome Institute GCA_000421265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/265/GCF_000421265.1_ASM42126v1/ na assembly from type material na haploid bacteria 4746254 4746254 53.500000 0 22 22 NCBI RefSeq GCF_000421265.1-RS_2026_05_02 2026-05-02 4385 4298 65 na GCF_000421285.1 PRJNA224116 SAMN02440581 ATWO00000000.1 reference genome 1304886 115781 Desulfotignum balticum DSM 7044 strain=DSM 7044 na latest Contig Major Full 2013-07-09 ASM42128v1 DOE Joint Genome Institute GCA_000421285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/285/GCF_000421285.1_ASM42128v1/ na assembly from type material na haploid bacteria 5118755 5118755 51.000000 0 5 5 NCBI RefSeq GCF_000421285.1-RS_2026_07_03 2026-07-03 4823 4709 61 na GCF_000421305.1 PRJNA224116 SAMN02440582 ATWP00000000.1 na 1304879 1304879 Bradyrhizobium sp. is5 strain=is5 na latest Contig Major Full 2013-07-09 ASM42130v1 DOE Joint Genome Institute GCA_000421305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/305/GCF_000421305.1_ASM42130v1/ na na na haploid bacteria 7588794 7588794 64.000000 0 60 60 NCBI RefSeq GCF_000421305.1-RS_2026_06_21 2026-06-21 7338 7116 51 na GCF_000421345.1 PRJNA224116 SAMN02441227 ATWV00000000.1 na 877418 163 Treponema bryantii NK4A124 strain=NK4A124 na latest Contig Major Full 2013-07-09 ASM42134v1 DOE Joint Genome Institute GCA_000421345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/345/GCF_000421345.1_ASM42134v1/ na na na haploid bacteria 3309485 3309485 40.000000 0 28 28 NCBI RefSeq GCF_000421345.1-RS_2026_02_08 2026-02-08 2937 2865 59 na GCF_000421365.1 PRJNA224116 SAMN02440890 ATWW00000000.1 na 1280701 1694 Bifidobacterium pseudolongum AGR2145 strain=AGR2145 na latest Contig Major Full 2013-07-09 ASM42136v1 DOE Joint Genome Institute GCA_000421365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/365/GCF_000421365.1_ASM42136v1/ na na na haploid bacteria 1992204 1992204 63.500000 0 30 30 NCBI RefSeq GCF_000421365.1-RS_2026_04_04 2026-04-04 1711 1613 59 na GCF_000421385.1 PRJNA224116 SAMN02441228 ATWX00000000.1 na 1280702 216816 Bifidobacterium longum AGR2137 strain=AGR2137 na latest Contig Major Full 2013-07-09 ASM42138v1 DOE Joint Genome Institute GCA_000421385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/385/GCF_000421385.1_ASM42138v1/ na na na haploid bacteria 2270377 2270377 60.000000 0 49 49 NCBI RefSeq GCF_000421385.1-RS_2026_01_30 2026-01-30 1987 1819 69 na GCF_000421405.1 PRJNA224116 SAMN02440583 ATWY00000000.1 na 1280683 1280683 Butyrivibrio sp. NC2007 strain=NC2007 na latest Contig Major Full 2013-07-09 ASM42140v1 DOE Joint Genome Institute GCA_000421405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/405/GCF_000421405.1_ASM42140v1/ na na na haploid bacteria 4000398 4000398 43.500000 0 54 54 NCBI RefSeq GCF_000421405.1-RS_2025_08_25 2025-08-25 3600 3514 59 na GCF_000421425.1 PRJNA224116 SAMN02440584 ATWZ00000000.1 na 1280704 1335 Streptococcus equinus SN033 strain=SN033 na latest Contig Major Full 2013-07-09 ASM42142v1 DOE Joint Genome Institute GCA_000421425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/425/GCF_000421425.1_ASM42142v1/ na na na haploid bacteria 1843423 1843423 37.000000 0 13 13 NCBI RefSeq GCF_000421425.1-RS_2026_02_02 2026-02-02 1804 1749 40 na GCF_000421465.1 PRJNA224116 SAMN02441580 ATXB00000000.1 reference genome 1283300 244365 Methylohalobius crimeensis 10Ki strain=10Ki na latest Contig Major Full 2013-07-09 ASM42146v1 DOE Joint Genome Institute GCA_000421465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/465/GCF_000421465.1_ASM42146v1/ na assembly from type material na haploid bacteria 3509607 3509607 58.500000 0 5 5 NCBI RefSeq GCF_000421465.1-RS_2025_12_10 2025-12-10 3435 3348 56 26067976 GCF_000421485.1 PRJNA224116 SAMN02440891 ATXC00000000.1 na 1158318 1158318 Desulfurobacterium sp. TC5-1 strain=TC5-1 na latest Contig Major Full 2013-07-09 ASM42148v1 DOE Joint Genome Institute GCA_000421485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/485/GCF_000421485.1_ASM42148v1/ na na na haploid bacteria 1653625 1653625 40.000000 0 4 4 NCBI RefSeq GCF_000421485.1-RS_2024_05_05 2024-05-05 1729 1675 50 na GCF_000421505.1 PRJNA224116 SAMN02440585 ATXD00000000.1 na 1286820 69825 Lacrimispora indolis SR3 strain=SR3 na latest Contig Major Full 2013-07-09 ASM42150v1 DOE Joint Genome Institute GCA_000421505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/505/GCF_000421505.1_ASM42150v1/ na assembly from heterotypic synonym type material na haploid bacteria 7085377 7085377 44.500000 0 14 14 NCBI RefSeq GCF_000421505.1-RS_2025_07_21 2025-07-21 6613 6458 93 na GCF_000421525.1 PRJNA224116 SAMN02440892 ATXE00000000.1 reference genome 1120954 396389 Aestuariimicrobium kwangyangense DSM 21549 strain=DSM 21549 na latest Contig Major Full 2013-07-09 ASM42152v1 DOE Joint Genome Institute GCA_000421525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/525/GCF_000421525.1_ASM42152v1/ na assembly from type material na haploid bacteria 2990149 2990149 68.500000 0 5 5 NCBI RefSeq GCF_000421525.1-RS_2026_05_02 2026-05-02 2681 2607 54 na GCF_000421545.1 PRJNA224116 SAMN02441581 ATXF00000000.1 reference genome 1120959 279572 Agromyces italicus DSM 16388 strain=DSM 16388 na latest Contig Major Full 2013-07-09 ASM42154v1 DOE Joint Genome Institute GCA_000421545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/545/GCF_000421545.1_ASM42154v1/ na assembly from type material na haploid bacteria 3730505 3730505 70.000000 0 12 12 NCBI RefSeq GCF_000421545.1-RS_2026_05_02 2026-05-02 3449 3368 53 na GCF_000421565.1 PRJNA224116 SAMN02441229 ATXG00000000.1 reference genome 1120960 293890 Agromyces subbeticus DSM 16689 strain=DSM 16689 na latest Contig Major Full 2013-07-09 ASM42156v1 DOE Joint Genome Institute GCA_000421565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/565/GCF_000421565.1_ASM42156v1/ na assembly from type material na haploid bacteria 4303916 4303916 69.000000 0 34 34 NCBI RefSeq GCF_000421565.1-RS_2025_05_02 2025-05-02 4017 3936 53 na GCF_000421585.1 PRJNA224116 SAMN02440586 ATXH00000000.1 reference genome 1123371 501497 Thermodesulfatator atlanticus DSM 21156 strain=DSM 21156 na latest Contig Major Full 2013-07-09 ASM42158v1 DOE Joint Genome Institute GCA_000421585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/585/GCF_000421585.1_ASM42158v1/ na assembly from type material na haploid bacteria 2302285 2302285 45.000000 0 60 60 NCBI RefSeq GCF_000421585.1-RS_2026_05_02 2026-05-02 2279 2197 56 na GCF_000421605.1 PRJNA224116 SAMN02441582 ATXI00000000.1 reference genome 1123373 886 Thermodesulfobacterium thermophilum DSM 1276 strain=DSM 1276 na latest Contig Major Full 2013-07-09 ASM42160v1 DOE Joint Genome Institute GCA_000421605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/605/GCF_000421605.1_ASM42160v1/ na assembly from type material na haploid bacteria 1787382 1787382 37.000000 0 46 46 NCBI RefSeq GCF_000421605.1-RS_2026_04_07 2026-04-07 1842 1741 53 na GCF_000421625.1 PRJNA224116 SAMN02441230 ATXJ00000000.1 reference genome 1123389 540988 Thermus islandicus DSM 21543 strain=DSM 21543 na latest Scaffold Major Full 2013-07-09 ASM42162v1 DOE Joint Genome Institute GCA_000421625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/625/GCF_000421625.1_ASM42162v1/ na assembly from type material na haploid bacteria 2263010 2263000 68.500000 0 67 68 NCBI RefSeq GCF_000421625.1-RS_2025_08_07 2025-08-07 2452 2324 59 na GCF_000421645.1 PRJNA224116 SAMN02441568 ATXK00000000.1 reference genome 1121027 182270 Aurantimonas coralicida DSM 14790 strain=DSM 14790 na latest Contig Major Full 2013-07-09 ASM42164v1 DOE Joint Genome Institute GCA_000421645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/645/GCF_000421645.1_ASM42164v1/ na assembly from type material na haploid bacteria 4615647 4615647 66.500000 0 38 38 NCBI RefSeq GCF_000421645.1-RS_2026_04_26 2026-04-26 4458 4333 61 na GCF_000421665.1 PRJNA224116 SAMN02440893 ATXL00000000.1 reference genome 1255705 549685 Bavariicoccus seileri WCC 4188 strain=DSM 19936 na latest Contig Major Full 2013-07-09 ASM42166v1 DOE Joint Genome Institute GCA_000421665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/665/GCF_000421665.1_ASM42166v1/ na assembly from type material na haploid bacteria 2242440 2242440 38.000000 0 109 109 NCBI RefSeq GCF_000421665.1-RS_2026_03_30 2026-03-30 2155 2035 49 na GCF_000421685.1 PRJNA224116 SAMN02440587 ATXM00000000.1 reference genome 1121109 1693 Bifidobacterium minimum DSM 20102 strain=DSM 20102 na latest Contig Major Full 2013-07-09 ASM42168v1 DOE Joint Genome Institute GCA_000421685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/685/GCF_000421685.1_ASM42168v1/ na assembly from type material na haploid bacteria 1867315 1867315 62.500000 0 29 29 NCBI RefSeq GCF_000421685.1-RS_2026_04_26 2026-04-26 1575 1467 51 na GCF_000421705.1 PRJNA224116 SAMN02441231 ATXN00000000.1 reference genome 1121125 588932 Brevundimonas naejangsanensis DSM 23858 strain=DSM 23858 na latest Contig Major Full 2013-07-09 ASM42170v1 DOE Joint Genome Institute GCA_000421705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/705/GCF_000421705.1_ASM42170v1/ na assembly from type material na haploid bacteria 3164519 3164519 66.500000 0 10 10 NCBI RefSeq GCF_000421705.1-RS_2026_03_12 2026-03-12 3090 3006 66 na GCF_000421725.1 PRJNA224116 SAMN02440894 ATXO00000000.1 na 1121259 301953 Caldicellulosiruptor acetigenus DSM 7040 strain=DSM 7040 na latest Contig Major Full 2013-07-09 ASM42172v1 DOE Joint Genome Institute GCA_000421725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/725/GCF_000421725.1_ASM42172v1/ na assembly from type material na haploid bacteria 2589957 2589957 36.000000 0 37 37 NCBI RefSeq GCF_000421725.1-RS_2026_02_24 2026-02-24 2504 2392 56 na GCF_000421745.1 PRJNA224116 SAMN02440588 ATXP00000000.1 reference genome 1122602 515814 Nesterenkonia alba DSM 19423 strain=DSM 19423 na latest Contig Major Full 2013-07-09 ASM42174v1 DOE Joint Genome Institute GCA_000421745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/745/GCF_000421745.1_ASM42174v1/ na assembly from type material na haploid bacteria 2591866 2591866 63.500000 0 36 36 NCBI RefSeq GCF_000421745.1-RS_2026_05_02 2026-05-02 2416 2340 55 na GCF_000421765.1 PRJNA224116 SAMN02440589 ATXQ00000000.1 reference genome 521719 521720 Denitrificimonas caeni DSM 24390 strain=DSM 24390 na latest Contig Major Full 2013-07-09 ASM42176v1 DOE Joint Genome Institute GCA_000421765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/765/GCF_000421765.1_ASM42176v1/ na assembly from type material na haploid bacteria 3022325 3022325 48.500000 0 24 24 NCBI RefSeq GCF_000421765.1-RS_2025_12_13 2025-12-13 2844 2767 51 na GCF_000421785.1 PRJNA224116 SAMN02440590 ATXR00000000.1 na 1123316 1314 Streptococcus pyogenes DSM 20565 strain=DSM 20565 na latest Contig Major Full 2013-07-09 ASM42178v1 DOE Joint Genome Institute GCA_000421785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/785/GCF_000421785.1_ASM42178v1/ na assembly from type material na haploid bacteria 1858737 1858737 38.500000 0 31 31 NCBI RefSeq GCF_000421785.1-RS_2026_05_18 2026-05-18 1895 1777 43 na GCF_000421805.1 PRJNA224116 SAMN02441569 ATXS00000000.1 na 1121945 337243 Halorubrum ezzemoulense DSM 17463 strain=DSM 17463 na latest Contig Major Full 2013-07-09 ASM42180v1 DOE Joint Genome Institute GCA_000421805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/805/GCF_000421805.1_ASM42180v1/ na assembly from type material na haploid archaea 3591480 3591480 66.500000 0 96 96 NCBI RefSeq GCF_000421805.1-RS_2025_12_04 2025-12-04 3680 3455 66 na GCF_000421825.1 PRJNA224116 SAMN02440591 ATXT00000000.1 reference genome 1121952 427754 Humibacter albus DSM 18994 strain=DSM 18994 na latest Contig Major Full 2013-07-09 ASM42182v1 DOE Joint Genome Institute GCA_000421825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/825/GCF_000421825.1_ASM42182v1/ na assembly from type material na haploid bacteria 3693075 3693075 68.000000 0 20 20 NCBI RefSeq GCF_000421825.1-RS_2026_05_02 2026-05-02 3322 3242 57 na GCF_000421845.1 PRJNA224116 SAMN02441232 ATXU00000000.1 reference genome 1122175 491918 Leucobacter chironomi DSM 19883 strain=DSM 19883 na latest Contig Major Full 2013-07-09 ASM42184v1 DOE Joint Genome Institute GCA_000421845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/845/GCF_000421845.1_ASM42184v1/ na assembly from type material na haploid bacteria 2964712 2964712 70.000000 0 27 27 NCBI RefSeq GCF_000421845.1-RS_2026_03_30 2026-03-30 2757 2666 57 26203333 GCF_000421865.1 PRJNA224116 SAMN02441233 ATXV00000000.1 na 60548 60548 Paraburkholderia graminis strain=URHA0054 na latest Scaffold Major Full 2013-07-09 ASM42186v1 DOE Joint Genome Institute GCA_000421865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/865/GCF_000421865.1_ASM42186v1/ na na na haploid bacteria 7244804 7244794 63.000000 0 53 54 NCBI RefSeq GCF_000421865.1-RS_2026_05_26 2026-05-26 6483 6318 63 na GCF_000421965.1 PRJNA224116 SAMN02469732 ATAY00000000.1 na 1330534 29362 Ruminiclostridium papyrosolvens C7 strain=C7 na latest Contig Major Full 2013-07-10 CpC7 Weizmann Institute of Science GCA_000421965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/965/GCF_000421965.1_CpC7/ na na na haploid bacteria 4400934 4400934 37.000000 0 104 104 NCBI RefSeq GCF_000421965.1-RS_2025_06_05 2025-06-05 4005 3879 63 24029755 GCF_000421995.1 PRJNA224116 SAMN02146299 ASTH00000000.1 na 1334631 1280 Staphylococcus aureus SA_ST125_MupR strain=SA_ST125_MupR na latest Contig Major Full 2013-07-10 ASM42199v1 Servicio de Microbiologia Hospital Universitario 12 de Octubre GCA_000421995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/421/995/GCF_000421995.1_ASM42199v1/ na na na haploid bacteria 2851130 2851130 32.500000 0 42 42 NCBI RefSeq GCF_000421995.1-RS_2025_02_14 2025-02-14 2897 2727 71 23929481 GCF_000422025.1 PRJNA224116 SAMN02471005 ATCO00000000.1 na 886559 886559 Geobacillus sp. WSUCF1 strain=WSUCF1 na latest Contig Major Full 2013-07-11 DUJ South Dakota School of Mines and Technology GCA_000422025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/025/GCF_000422025.1_DUJ/ na na na haploid bacteria 3402383 3402383 52.000000 0 346 346 NCBI RefSeq GCF_000422025.1-RS_2024_08_13 2024-08-13 3642 3065 87 23950119 GCF_000422045.1 PRJNA224116 SAMN02604317 na na 1336746 1314 Streptococcus pyogenes HSC5 strain=HSC5 na latest Complete Genome Major Full 2013-07-11 ASM42204v1 Washington University in St Louis GCA_000422045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/045/GCF_000422045.1_ASM42204v1/ na na na haploid bacteria 1818351 1818351 38.500000 1 1 1 NCBI RefSeq GCF_000422045.1-RS_2025_12_19 2025-12-19 1841 1695 89 23950122 GCF_000422085.1 PRJNA224116 SAMN02604177 na reference genome 1346614 614 Serratia liquefaciens ATCC 27592 strain=ATCC 27592 na latest Complete Genome Major Full 2013-07-11 ASM42208v1 University of Florida GCA_000422085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/085/GCF_000422085.1_ASM42208v1/ na assembly from type material na haploid bacteria 5282719 5282719 55.500000 2 2 2 NCBI RefSeq GCF_000422085.1-RS_2025_12_10 2025-12-10 4987 4814 118 23950115 GCF_000422095.1 PRJNA224116 SAMN02056364 na na 1311760 75985 Mannheimia haemolytica D174 strain=D174 na latest Complete Genome Major Full 2013-07-11 ASM42209v1 National Animal Disease Center GCA_000422095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/095/GCF_000422095.1_ASM42209v1/ na na na haploid bacteria 2702201 2702201 41.000000 1 1 1 NCBI RefSeq GCF_000422095.1-RS_2026_02_02 2026-02-02 2823 2640 89 25745008 GCF_000422125.1 PRJNA224116 SAMN02603180 na na 1306414 1773 Mycobacterium tuberculosis EAI5 strain=EAI5 MUM101 latest Complete Genome Major Full 2013-07-11 ASM42212v1 Department of Life Sciences, Mumbai University, Mumbai, India GCA_000422125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/125/GCF_000422125.1_ASM42212v1/ na na na haploid bacteria 4391174 4391174 65.500000 1 1 1 NCBI RefSeq GCF_000422125.1-RS_2025_06_29 2025-06-29 4148 3903 51 24604653 GCF_000422145.1 PRJNA224116 SAMN02056285 na na 1261126 75985 Mannheimia haemolytica D153 strain=D153 na latest Complete Genome Major Full 2013-07-11 ASM42214v1 National Animal Disease Center GCA_000422145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/145/GCF_000422145.1_ASM42214v1/ na na na haploid bacteria 2681844 2681844 41.000000 1 1 1 NCBI RefSeq GCF_000422145.1-RS_2026_02_02 2026-02-02 2762 2586 86 24136851 GCF_000422165.1 PRJNA224116 SAMN02604285 na na 326425 1587 Lactobacillus helveticus CNRZ32 strain=CNRZ32 na latest Complete Genome Major Full 2013-07-11 ASM42216v1 Utah State University GCA_000422165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/165/GCF_000422165.1_ASM42216v1/ na na na haploid bacteria 2225962 2225962 37.000000 1 1 1 NCBI RefSeq GCF_000422165.1-RS_2026_03_21 2026-03-21 2354 1945 78 23969047 GCF_000422185.1 PRJNA224116 SAMN02207450 ATHJ00000000.1 na 1121405 897 Desulfococcus multivorans DSM 2059 strain=DSM 2059 na latest Contig Major Full 2013-07-11 D_multivorans_DSM2059_v1.0 Oak Ridge National Lab GCA_000422185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/185/GCF_000422185.1_D_multivorans_DSM2059_v1.0/ na assembly from type material na haploid bacteria 4403007 4403007 57.000000 0 149 149 NCBI RefSeq GCF_000422185.1-RS_2025_12_12 2025-12-12 3874 3780 57 23950126 GCF_000422205.1 PRJNA224116 SAMN02207452 ATHV00000000.1 na 941449 941449 Desulfovibrio sp. X2 strain=X2 na latest Contig Major Full 2013-07-11 Desulfococcus_X2_v1.0 Oak Ridge National Lab GCA_000422205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/205/GCF_000422205.1_Desulfococcus_X2_v1.0/ na na na haploid bacteria 3912295 3912295 68.000000 0 66 66 NCBI RefSeq GCF_000422205.1-RS_2024_08_05 2024-08-05 3519 3457 55 23950126 GCF_000422245.1 PRJNA224116 SAMN02207451 ATHI00000000.1 reference genome 1121439 293256 Alkalidesulfovibrio alkalitolerans DSM 16529 strain=DSM 16529 na latest Contig Major Full 2013-07-11 D_alkalitolerans_DSM16529_v1.0 Oak Ridge National Lab GCA_000422245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/245/GCF_000422245.1_D_alkalitolerans_DSM16529_v1.0/ na assembly from type material na haploid bacteria 3202328 3202328 64.500000 0 32 32 NCBI RefSeq GCF_000422245.1-RS_2025_08_29 2025-08-29 2983 2920 56 23950126 GCF_000422265.1 PRJNA224116 SAMN02440683 AULL00000000.1 reference genome 1121288 493376 Kaistella palustris DSM 21579 strain=DSM 21579 na latest Scaffold Major Full 2013-07-11 ASM42226v1 DOE Joint Genome Institute GCA_000422265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/265/GCF_000422265.1_ASM42226v1/ na assembly from type material na haploid bacteria 2982326 2981097 41.500000 0 18 20 NCBI RefSeq GCF_000422265.1-RS_2025_12_11 2025-12-11 2693 2632 44 na GCF_000422285.1 PRJNA224116 SAMN02441472 AULM00000000.1 reference genome 1121399 90728 Desulfatiglans anilini DSM 4660 strain=DSM 4660 na latest Scaffold Major Full 2013-07-11 ASM42228v1 DOE Joint Genome Institute GCA_000422285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/285/GCF_000422285.1_ASM42228v1/ na assembly from type material na haploid bacteria 4667344 4664663 59.000000 0 107 109 NCBI RefSeq GCF_000422285.1-RS_2026_07_03 2026-07-03 4123 3998 53 na GCF_000422305.1 PRJNA224116 SAMN02440816 AULN00000000.1 reference genome 1122183 83615 Luteimonas mephitis DSM 12574 strain=DSM 12574 na latest Scaffold Major Full 2013-07-11 ASM42230v1 DOE Joint Genome Institute GCA_000422305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/305/GCF_000422305.1_ASM42230v1/ na assembly from type material na haploid bacteria 3416011 3415856 68.500000 0 18 20 NCBI RefSeq GCF_000422305.1-RS_2026_05_02 2026-05-02 3123 3023 52 na GCF_000422325.1 PRJNA224116 SAMN02440684 AULO00000000.1 reference genome 1122212 64974 Marinospirillum minutulum DSM 6287 strain=DSM 6287 na latest Scaffold Major Full 2013-07-11 ASM42232v1 DOE Joint Genome Institute GCA_000422325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/325/GCF_000422325.1_ASM42232v1/ na assembly from type material na haploid bacteria 2836070 2835360 43.000000 0 14 16 NCBI RefSeq GCF_000422325.1-RS_2026_05_02 2026-05-02 2701 2612 60 na GCF_000422345.1 PRJNA224116 SAMN02440685 AULP00000000.1 na 1122224 354246 Neomelitea salexigens DSM 19753 strain=DSM 19753 na latest Scaffold Major Full 2013-07-11 ASM42234v1 DOE Joint Genome Institute GCA_000422345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/345/GCF_000422345.1_ASM42234v1/ na assembly from heterotypic synonym type material na haploid bacteria 3435542 3434211 55.000000 0 21 23 NCBI RefSeq GCF_000422345.1-RS_2026_04_07 2026-04-07 3233 3168 51 na GCF_000422365.1 PRJNA224116 SAMN02441142 AULQ00000000.1 na 1122225 393060 Mesoflavibacter zeaxanthinifaciens DSM 18436 strain=DSM 18436 na latest Scaffold Major Full 2013-07-11 ASM42236v1 DOE Joint Genome Institute GCA_000422365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/365/GCF_000422365.1_ASM42236v1/ na assembly from type material na haploid bacteria 2966206 2965434 31.500000 0 21 22 NCBI RefSeq GCF_000422365.1-RS_2026_03_31 2026-03-31 2736 2678 48 na GCF_000422385.1 PRJNA224116 SAMN02440686 AULR00000000.1 reference genome 1122238 358100 Microbacterium indicum DSM 19969 strain=DSM 19969 na latest Scaffold Major Full 2013-07-11 ASM42238v1 DOE Joint Genome Institute GCA_000422385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/385/GCF_000422385.1_ASM42238v1/ na assembly from type material na haploid bacteria 2809959 2808192 71.500000 0 28 31 NCBI RefSeq GCF_000422385.1-RS_2026_05_02 2026-05-02 2724 2633 55 na GCF_000422405.1 PRJNA224116 SAMN02440801 AULS00000000.1 reference genome 1122239 451764 Microbacterium luticocti DSM 19459 strain=DSM 19459 na latest Scaffold Major Full 2013-07-11 ASM42240v1 DOE Joint Genome Institute GCA_000422405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/405/GCF_000422405.1_ASM42240v1/ na assembly from type material na haploid bacteria 3115873 3113993 70.500000 0 27 32 NCBI RefSeq GCF_000422405.1-RS_2026_05_02 2026-05-02 2889 2795 53 na GCF_000422425.1 PRJNA224116 SAMN02441143 AULT00000000.1 reference genome 1122616 64976 Oceanospirillum beijerinckii DSM 7166 strain=DSM 7166 na latest Scaffold Major Full 2013-07-11 ASM42242v1 DOE Joint Genome Institute GCA_000422425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/425/GCF_000422425.1_ASM42242v1/ na assembly from type material na haploid bacteria 5325321 5314314 48.000000 0 99 110 NCBI RefSeq GCF_000422425.1-RS_2026_05_02 2026-05-02 4595 4468 73 na GCF_000422445.1 PRJNA224116 SAMN02441144 AULU00000000.1 reference genome 1122916 311244 Paenibacillus assamensis DSM 18201 strain=DSM 18201 na latest Scaffold Major Full 2013-07-11 ASM42244v1 DOE Joint Genome Institute GCA_000422445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/445/GCF_000422445.1_ASM42244v1/ na assembly from type material na haploid bacteria 5027965 5022279 43.500000 0 32 37 NCBI RefSeq GCF_000422445.1-RS_2026_05_02 2026-05-02 4482 4360 85 na GCF_000422465.1 PRJNA224116 SAMN02441473 AULV00000000.1 reference genome 1122920 306543 Paenibacillus harenae DSM 16969 strain=DSM 16969 na latest Scaffold Major Full 2013-07-11 ASM42246v1 DOE Joint Genome Institute GCA_000422465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/465/GCF_000422465.1_ASM42246v1/ na assembly from type material na haploid bacteria 6968425 6966844 50.500000 0 28 36 NCBI RefSeq GCF_000422465.1-RS_2026_05_02 2026-05-02 6359 6135 98 na GCF_000422485.1 PRJNA224116 SAMN02440802 AULW00000000.1 na 1122923 217090 Paenibacillus pasadenensis DSM 19293 strain=DSM 19293 na latest Scaffold Major Full 2013-07-11 ASM42248v1 DOE Joint Genome Institute GCA_000422485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/485/GCF_000422485.1_ASM42248v1/ na assembly from type material na haploid bacteria 5714182 5696691 63.500000 0 49 85 NCBI RefSeq GCF_000422485.1-RS_2026_03_30 2026-03-30 5018 4885 86 na GCF_000422505.1 PRJNA224116 SAMN02440803 AULX00000000.1 reference genome 1122924 669462 Paenibacillus pinihumi DSM 23905 = JCM 16419 strain=DSM 23905 na latest Scaffold Major Full 2013-07-11 ASM42250v1 DOE Joint Genome Institute GCA_000422505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/505/GCF_000422505.1_ASM42250v1/ na assembly from type material na haploid bacteria 6760575 6753677 48.500000 0 45 56 NCBI RefSeq GCF_000422505.1-RS_2026_05_02 2026-05-02 6092 5916 81 na GCF_000422545.1 PRJNA224116 SAMN02441475 AULZ00000000.1 na 1121435 873 Desulfocurvibacter africanus subsp. africanus DSM 2603 strain=DSM 2603 na latest Scaffold Major Full 2013-07-11 ASM42254v1 DOE Joint Genome Institute GCA_000422545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/545/GCF_000422545.1_ASM42254v1/ na assembly from type material na haploid bacteria 4402525 4400400 61.000000 0 41 44 NCBI RefSeq GCF_000422545.1-RS_2026_03_30 2026-03-30 4056 3963 63 31068923 GCF_000422565.1 PRJNA224116 SAMN02440804 AUMA00000000.1 reference genome 1121440 81425 Desulfovibrio aminophilus DSM 12254 strain=DSM 12254 na latest Scaffold Major Full 2013-07-11 ASM42256v1 DOE Joint Genome Institute GCA_000422565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/565/GCF_000422565.1_ASM42256v1/ na assembly from type material na haploid bacteria 3419064 3414374 66.000000 0 25 29 NCBI RefSeq GCF_000422565.1-RS_2026_05_02 2026-05-02 3332 3252 59 na GCF_000422585.1 PRJNA224116 SAMN02441176 AUGI00000000.1 reference genome 1121903 1002 Hugenholtzia roseola DSM 9546 strain=DSM 9546 na latest Scaffold Major Full 2013-07-11 ASM42258v1 DOE Joint Genome Institute GCA_000422585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/585/GCF_000422585.1_ASM42258v1/ na assembly from type material na haploid bacteria 4254862 4227160 42.000000 0 60 88 NCBI RefSeq GCF_000422585.1-RS_2026_05_02 2026-05-02 3418 3343 52 na GCF_000422605.1 PRJNA224116 SAMN02440847 AUGJ00000000.1 na 999415 31973 Eggerthia catenaformis OT 569 = DSM 20559 strain=DSM 20559 na latest Scaffold Major Full 2013-07-11 ASM42260v1 DOE Joint Genome Institute GCA_000422605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/605/GCF_000422605.1_ASM42260v1/ na assembly from type material na haploid bacteria 1921006 1917551 32.000000 0 37 40 NCBI RefSeq GCF_000422605.1-RS_2026_04_21 2026-04-21 1959 1877 58 na GCF_000422625.1 PRJNA224116 SAMN02440648 AUGK00000000.1 reference genome 1121866 580026 Adlercreutzia mucosicola DSM 19490 strain=DSM 19490 na latest Scaffold Major Full 2013-07-11 ASM42262v1 DOE Joint Genome Institute GCA_000422625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/625/GCF_000422625.1_ASM42262v1/ na assembly from type material na haploid bacteria 3009872 3009802 64.500000 0 27 30 NCBI RefSeq GCF_000422625.1-RS_2025_12_10 2025-12-10 2507 2435 61 na GCF_000422645.1 PRJNA224116 SAMN02441517 AUGL00000000.1 reference genome 1121878 364764 Ferrimonas futtsuensis DSM 18154 strain=DSM 18154 na latest Scaffold Major Full 2013-07-11 ASM42264v1 DOE Joint Genome Institute GCA_000422645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/645/GCF_000422645.1_ASM42264v1/ na assembly from type material na haploid bacteria 4296027 4294157 58.500000 0 39 42 NCBI RefSeq GCF_000422645.1-RS_2026_05_02 2026-05-02 3970 3877 78 na GCF_000422665.1 PRJNA224116 SAMN02440848 AUGM00000000.1 reference genome 1121880 394566 Ferrimonas senticii DSM 18821 strain=DSM 18821 na latest Scaffold Major Full 2013-07-11 ASM42266v1 DOE Joint Genome Institute GCA_000422665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/665/GCF_000422665.1_ASM42266v1/ na assembly from type material na haploid bacteria 3885737 3882201 54.000000 0 30 38 NCBI RefSeq GCF_000422665.1-RS_2026_03_30 2026-03-30 3512 3422 68 na GCF_000422685.1 PRJNA224116 SAMN02441177 AUGN00000000.1 reference genome 1121891 206041 Flavobacterium gelidilacus DSM 15343 strain=DSM 15343 na latest Scaffold Major Full 2013-07-11 ASM42268v1 DOE Joint Genome Institute GCA_000422685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/685/GCF_000422685.1_ASM42268v1/ na assembly from type material na haploid bacteria 3441043 3439598 30.000000 0 47 51 NCBI RefSeq GCF_000422685.1-RS_2026_05_02 2026-05-02 3163 3097 45 na GCF_000422705.1 PRJNA224116 SAMN02441178 AUGO00000000.1 reference genome 1121897 344881 Flavobacterium soli DSM 19725 strain=DSM 19725 na latest Scaffold Major Full 2013-07-11 ASM42270v1 DOE Joint Genome Institute GCA_000422705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/705/GCF_000422705.1_ASM42270v1/ na assembly from type material na haploid bacteria 4002854 3998751 36.000000 0 21 24 NCBI RefSeq GCF_000422705.1-RS_2025_12_11 2025-12-11 3497 3422 50 na GCF_000422725.1 PRJNA224116 SAMN02441179 AUGP00000000.1 reference genome 1121898 426226 Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain=DSM 21790 na latest Scaffold Major Full 2013-07-11 ASM42272v1 DOE Joint Genome Institute GCA_000422725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/725/GCF_000422725.1_ASM42272v1/ na assembly from type material na haploid bacteria 4638566 4629947 41.500000 0 19 31 NCBI RefSeq GCF_000422725.1-RS_2026_04_26 2026-04-26 4063 3995 50 na GCF_000422745.1 PRJNA224116 SAMN02440649 AUGQ00000000.1 reference genome 1122237 159896 Microbacterium gubbeenense DSM 15944 strain=DSM 15944 na latest Scaffold Major Full 2013-07-11 ASM42274v1 DOE Joint Genome Institute GCA_000422745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/745/GCF_000422745.1_ASM42274v1/ na assembly from type material na haploid bacteria 3017924 3017774 68.000000 0 74 76 NCBI RefSeq GCF_000422745.1-RS_2026_05_02 2026-05-02 2934 2820 58 na GCF_000422765.1 PRJNA224116 SAMN02440650 AUGR00000000.1 reference genome 1122599 417574 Neptunomonas japonica DSM 18939 strain=DSM 18939 na latest Scaffold Major Full 2013-07-11 ASM42276v1 DOE Joint Genome Institute GCA_000422765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/765/GCF_000422765.1_ASM42276v1/ na assembly from type material na haploid bacteria 4391552 4390732 43.500000 0 39 44 NCBI RefSeq GCF_000422765.1-RS_2026_05_02 2026-05-02 4241 4151 65 na GCF_000422785.1 PRJNA224116 SAMN02441518 AUGS00000000.1 reference genome 1122601 197461 Pseudovibrio exalbescens DSM 16456 strain=DSM 16456 na latest Scaffold Major Full 2013-07-11 ASM42278v1 DOE Joint Genome Institute GCA_000422785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/785/GCF_000422785.1_ASM42278v1/ na assembly from type material na haploid bacteria 4157019 4151039 55.000000 0 36 41 NCBI RefSeq GCF_000422785.1-RS_2025_12_09 2025-12-09 3761 3674 63 na GCF_000422805.1 PRJNA224116 SAMN02440651 AUGT00000000.1 reference genome 1122609 433660 Nocardioides halotolerans DSM 19273 strain=DSM 19273 na latest Scaffold Major Full 2013-07-11 ASM42280v1 DOE Joint Genome Institute GCA_000422805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/805/GCF_000422805.1_ASM42280v1/ na assembly from type material na haploid bacteria 4856512 4852031 72.000000 0 24 37 NCBI RefSeq GCF_000422805.1-RS_2026_05_02 2026-05-02 4738 4665 52 na GCF_000422825.1 PRJNA224116 SAMN02441164 AUGU00000000.1 reference genome 1122610 394734 Nocardioides insulae DSM 17944 strain=DSM 17944 na latest Scaffold Major Full 2013-07-11 ASM42282v1 DOE Joint Genome Institute GCA_000422825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/825/GCF_000422825.1_ASM42282v1/ na assembly from type material na haploid bacteria 4060447 4060022 71.000000 0 17 21 NCBI RefSeq GCF_000422825.1-RS_2026_05_02 2026-05-02 3710 3627 58 na GCF_000422845.1 PRJNA224116 SAMN02441519 AUGV00000000.1 reference genome 1122615 64972 Oceanobacter kriegii DSM 6294 strain=DSM 6294 na latest Scaffold Major Full 2013-07-11 ASM42284v1 DOE Joint Genome Institute GCA_000422845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/845/GCF_000422845.1_ASM42284v1/ na assembly from type material na haploid bacteria 4505834 4504349 55.500000 0 36 42 NCBI RefSeq GCF_000422845.1-RS_2025_12_09 2025-12-09 4006 3940 59 na GCF_000422865.1 PRJNA224116 SAMN02440652 AUGW00000000.1 reference genome 1122617 64977 Oceanospirillum maris DSM 6286 strain=DSM 6286 na latest Scaffold Major Full 2013-07-11 ASM42286v1 DOE Joint Genome Institute GCA_000422865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/865/GCF_000422865.1_ASM42286v1/ na assembly from type material na haploid bacteria 3709807 3706598 46.000000 0 44 53 NCBI RefSeq GCF_000422865.1-RS_2026_05_02 2026-05-02 3355 3245 70 na GCF_000422885.1 PRJNA224116 SAMN02441165 AUGX00000000.1 reference genome 1122623 219182 Ottowia thiooxydans DSM 14619 strain=DSM 14619 na latest Scaffold Major Full 2013-07-11 ASM42288v1 DOE Joint Genome Institute GCA_000422885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/885/GCF_000422885.1_ASM42288v1/ na assembly from type material na haploid bacteria 7048723 7044342 58.500000 0 79 90 NCBI RefSeq GCF_000422885.1-RS_2026_05_02 2026-05-02 6419 6282 54 na GCF_000422905.1 PRJNA224116 SAMN02441166 AUGY00000000.1 na 1122915 59839 Paenibacillus alginolyticus DSM 5050 = NBRC 15375 strain=DSM 5050 na latest Scaffold Major Full 2013-07-11 ASM42290v1 DOE Joint Genome Institute GCA_000422905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/905/GCF_000422905.1_ASM42290v1/ na assembly from type material na haploid bacteria 8329305 8324978 45.000000 0 214 228 NCBI RefSeq GCF_000422905.1-RS_2025_12_23 2025-12-23 8079 7699 101 na GCF_000422925.1 PRJNA224116 SAMN02440653 AUGZ00000000.1 na 1122928 400061 Paludibacterium yongneupense DSM 18731 strain=DSM 18731 na latest Scaffold Major Full 2013-07-11 ASM42292v1 DOE Joint Genome Institute GCA_000422925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/925/GCF_000422925.1_ASM42292v1/ na assembly from type material na haploid bacteria 4332940 4327049 62.000000 0 53 62 NCBI RefSeq GCF_000422925.1-RS_2026_05_16 2026-05-16 4135 4016 74 na GCF_000422945.1 PRJNA224116 SAMN02440833 AUHA00000000.1 reference genome 468059 1122943 Daejeonella oryzae DSM 19973 strain=DSM 19973 na latest Scaffold Major Full 2013-07-11 ASM42294v1 DOE Joint Genome Institute GCA_000422945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/945/GCF_000422945.1_ASM42294v1/ na assembly from type material na haploid bacteria 3445768 3444648 38.000000 0 10 11 NCBI RefSeq GCF_000422945.1-RS_2025_12_09 2025-12-09 3074 3025 45 na GCF_000422965.1 PRJNA224116 SAMN02440654 AUHB00000000.1 reference genome 1122963 261934 Pleomorphomonas oryzae DSM 16300 strain=DSM 16300 na latest Scaffold Major Full 2013-07-11 ASM42296v1 DOE Joint Genome Institute GCA_000422965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/965/GCF_000422965.1_ASM42296v1/ na assembly from type material na haploid bacteria 5230452 5229912 63.000000 0 37 39 NCBI RefSeq GCF_000422965.1-RS_2026_05_02 2026-05-02 4899 4807 54 na GCF_000422985.1 PRJNA224116 SAMN02440655 AUHC00000000.1 reference genome 1122970 196588 Erythrobacter cryptus DSM 12079 strain=DSM 12079 na latest Scaffold Major Full 2013-07-11 ASM42298v1 DOE Joint Genome Institute GCA_000422985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/422/985/GCF_000422985.1_ASM42298v1/ na assembly from type material na haploid bacteria 2954426 2950776 68.000000 0 34 36 NCBI RefSeq GCF_000422985.1-RS_2026_05_02 2026-05-02 2899 2813 51 na GCF_000423005.1 PRJNA224116 SAMN02440834 AUHD00000000.1 reference genome 1121912 169050 Gelidibacter mesophilus DSM 14095 strain=DSM 14095 na latest Scaffold Major Full 2013-07-11 ASM42300v1 DOE Joint Genome Institute GCA_000423005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/005/GCF_000423005.1_ASM42300v1/ na assembly from type material na haploid bacteria 4430943 4430503 37.000000 0 55 56 NCBI RefSeq GCF_000423005.1-RS_2026_05_02 2026-05-02 3811 3716 44 na GCF_000423025.1 PRJNA224116 SAMN02440656 AUHE00000000.1 reference genome 1121928 376351 Gordonia shandongensis DSM 45094 strain=DSM 45094 na latest Scaffold Major Full 2013-07-11 ASM42302v1 DOE Joint Genome Institute GCA_000423025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/025/GCF_000423025.1_ASM42302v1/ na assembly from type material na haploid bacteria 3330647 3330007 69.500000 0 33 36 NCBI RefSeq GCF_000423025.1-RS_2026_05_02 2026-05-02 3160 3055 56 na GCF_000423045.1 PRJNA224116 SAMN02441167 AUHF00000000.1 reference genome 1121932 326069 Christiangramia portivictoriae DSM 23547 strain=DSM 23547 na latest Scaffold Major Full 2013-07-11 ASM42304v1 DOE Joint Genome Institute GCA_000423045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/045/GCF_000423045.1_ASM42304v1/ na assembly from type material na haploid bacteria 3269398 3264369 39.500000 0 8 11 NCBI RefSeq GCF_000423045.1-RS_2026_04_07 2026-04-07 3028 2963 51 na GCF_000423065.1 PRJNA224116 SAMN02441504 AUHG00000000.1 reference genome 1121931 279359 Christiangramia echinicola DSM 19838 strain=DSM 19838 na latest Scaffold Major Full 2013-07-11 ASM42306v1 DOE Joint Genome Institute GCA_000423065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/065/GCF_000423065.1_ASM42306v1/ na assembly from type material na haploid bacteria 3513826 3512735 37.000000 0 18 20 NCBI RefSeq GCF_000423065.1-RS_2026_04_07 2026-04-07 3208 3148 50 na GCF_000423085.1 PRJNA224116 SAMN02440835 AUHH00000000.1 na 1121933 266854 Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570 strain=DSM 17626 na latest Scaffold Major Full 2013-07-11 ASM42308v1 DOE Joint Genome Institute GCA_000423085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/085/GCF_000423085.1_ASM42308v1/ na assembly from type material na haploid bacteria 4117723 4112232 69.000000 0 74 83 NCBI RefSeq GCF_000423085.1-RS_2026_05_16 2026-05-16 3868 3767 61 na GCF_000423105.1 PRJNA224116 SAMN02440657 AUHI00000000.1 reference genome 1121936 392827 Halalkalibacillus halophilus DSM 18494 strain=DSM 18494 na latest Scaffold Major Full 2013-07-11 ASM42310v1 DOE Joint Genome Institute GCA_000423105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/105/GCF_000423105.1_ASM42310v1/ na assembly from type material na haploid bacteria 2707549 2707054 37.500000 0 25 27 NCBI RefSeq GCF_000423105.1-RS_2026_05_02 2026-05-02 2850 2750 79 na GCF_000423125.1 PRJNA224116 SAMN02441505 AUHJ00000000.1 reference genome 1121937 287487 Haliea salexigens DSM 19537 strain=DSM 19537 na latest Scaffold Major Full 2013-07-11 ASM42312v1 DOE Joint Genome Institute GCA_000423125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/125/GCF_000423125.1_ASM42312v1/ na assembly from type material na haploid bacteria 4258722 4257528 61.000000 0 76 78 NCBI RefSeq GCF_000423125.1-RS_2026_03_30 2026-03-30 3985 3891 52 na GCF_000423145.1 PRJNA224116 SAMN02441168 AUHK00000000.1 reference genome 1121947 241555 Helcococcus sueciensis DSM 17243 strain=DSM 17243 na latest Scaffold Major Full 2013-07-11 ASM42314v1 DOE Joint Genome Institute GCA_000423145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/145/GCF_000423145.1_ASM42314v1/ na assembly from type material na haploid bacteria 1573767 1572792 28.500000 0 43 45 NCBI RefSeq GCF_000423145.1-RS_2026_03_30 2026-03-30 1476 1412 41 na GCF_000423165.1 PRJNA224116 SAMN02440836 AUHL00000000.1 reference genome 1122124 431675 Pseudidiomarina sediminum DSM 21906 strain=DSM 21906 na latest Scaffold Major Full 2013-07-11 ASM42316v1 DOE Joint Genome Institute GCA_000423165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/165/GCF_000423165.1_ASM42316v1/ na assembly from type material na haploid bacteria 2624474 2624219 50.500000 0 10 14 NCBI RefSeq GCF_000423165.1-RS_2026_03_30 2026-03-30 2475 2395 62 na GCF_000423185.1 PRJNA224116 SAMN02441506 AUHM00000000.1 reference genome 1122125 171674 Inquilinus limosus DSM 16000 strain=DSM 16000 na latest Scaffold Major Full 2013-07-11 ASM42318v1 DOE Joint Genome Institute GCA_000423185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/185/GCF_000423185.1_ASM42318v1/ na assembly from type material na haploid bacteria 7413714 7409712 70.000000 0 64 74 NCBI RefSeq GCF_000423185.1-RS_2026_05_02 2026-05-02 7119 7007 75 na GCF_000423205.1 PRJNA224116 SAMN02441507 AUHN00000000.1 reference genome 1122130 262806 Jonesia quinghaiensis DSM 15701 strain=DSM 15701 na latest Scaffold Major Full 2013-07-11 ASM42320v1 DOE Joint Genome Institute GCA_000423205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/205/GCF_000423205.1_ASM42320v1/ na assembly from type material na haploid bacteria 3038127 3037772 57.000000 0 12 14 NCBI RefSeq GCF_000423205.1-RS_2026_05_02 2026-05-02 2776 2700 66 na GCF_000423225.1 PRJNA224116 SAMN02441508 AUHO00000000.1 reference genome 1122131 166954 Kaistia adipata DSM 17808 strain=DSM 17808 na latest Scaffold Major Full 2013-07-11 ASM42322v1 DOE Joint Genome Institute GCA_000423225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/225/GCF_000423225.1_ASM42322v1/ na assembly from type material na haploid bacteria 4839203 4836354 67.000000 0 12 14 NCBI RefSeq GCF_000423225.1-RS_2026_05_02 2026-05-02 4589 4503 58 na GCF_000423245.1 PRJNA224116 SAMN02441169 AUHP00000000.1 reference genome 1122146 395085 Ligilactobacillus ceti DSM 22408 strain=DSM 22408 na latest Scaffold Major Full 2013-07-11 ASM42324v1 DOE Joint Genome Institute GCA_000423245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/245/GCF_000423245.1_ASM42324v1/ na assembly from type material na haploid bacteria 1385752 1384771 33.500000 0 17 19 NCBI RefSeq GCF_000423245.1-RS_2026_04_26 2026-04-26 1337 1278 56 na GCF_000423265.1 PRJNA224116 SAMN02440837 AUHQ00000000.1 na 1122153 228229 Ligilactobacillus saerimneri DSM 16049 strain=DSM 16049 na latest Scaffold Major Full 2013-07-11 ASM42326v1 DOE Joint Genome Institute GCA_000423265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/265/GCF_000423265.1_ASM42326v1/ na assembly from type material na haploid bacteria 1720753 1719347 42.500000 0 47 50 NCBI RefSeq GCF_000423265.1-RS_2026_03_31 2026-03-31 1794 1707 53 na GCF_000423285.1 PRJNA224116 SAMN02441509 AUHR00000000.1 reference genome 1122157 168471 Laribacter hongkongensis DSM 14985 strain=DSM 14985 na latest Scaffold Major Full 2013-07-11 ASM42328v1 DOE Joint Genome Institute GCA_000423285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/285/GCF_000423285.1_ASM42328v1/ na assembly from type material na haploid bacteria 3110307 3110047 62.500000 0 40 44 NCBI RefSeq GCF_000423285.1-RS_2025_09_02 2025-09-02 3076 2939 77 na GCF_000423305.1 PRJNA224116 SAMN02441510 AUHS00000000.1 na 1122165 39962 Legionella moravica DSM 19234 strain=DSM 19234 na latest Scaffold Major Full 2013-07-11 ASM42330v1 DOE Joint Genome Institute GCA_000423305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/305/GCF_000423305.1_ASM42330v1/ na assembly from type material na haploid bacteria 3764213 3759691 40.000000 0 51 60 NCBI RefSeq GCF_000423305.1-RS_2026_05_16 2026-05-16 3242 3146 53 na GCF_000423325.1 PRJNA224116 SAMN02440838 AUHT00000000.1 reference genome 1385515 391738 Lysobacter defluvii IMMIB APB-9 = DSM 18482 strain=DSM 18482 na latest Scaffold Major Full 2013-07-11 ASM42332v1 DOE Joint Genome Institute GCA_000423325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/325/GCF_000423325.1_ASM42332v1/ na assembly from type material na haploid bacteria 2722122 2722062 70.500000 0 12 14 NCBI RefSeq GCF_000423325.1-RS_2025_12_02 2025-12-02 2608 2519 56 na GCF_000423345.1 PRJNA224116 SAMN02441511 AUHU00000000.1 reference genome 1122194 306546 Marinimicrobium agarilyticum DSM 16975 strain=DSM 16975 na latest Scaffold Major Full 2013-07-11 ASM42334v1 DOE Joint Genome Institute GCA_000423345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/345/GCF_000423345.1_ASM42334v1/ na assembly from type material na haploid bacteria 4502291 4500098 58.000000 0 29 32 NCBI RefSeq GCF_000423345.1-RS_2026_05_02 2026-05-02 3825 3742 64 na GCF_000423365.1 PRJNA224116 SAMN02441170 AUHV00000000.1 na 1122213 454601 Maritalea myrionectae DSM 19524 strain=DSM 19524 na latest Scaffold Major Full 2013-07-11 ASM42336v1 DOE Joint Genome Institute GCA_000423365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/365/GCF_000423365.1_ASM42336v1/ na assembly from type material na haploid bacteria 3539530 3539480 52.500000 0 10 12 NCBI RefSeq GCF_000423365.1-RS_2026_05_10 2026-05-10 3465 3409 45 na GCF_000423385.1 PRJNA224116 SAMN02441496 AUHW00000000.1 na 1122216 158847 Megamonas hypermegale DSM 1672 strain=DSM 1672 na latest Scaffold Major Full 2013-07-11 ASM42338v1 DOE Joint Genome Institute GCA_000423385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/385/GCF_000423385.1_ASM42338v1/ na assembly from type material na haploid bacteria 2157372 2154443 33.500000 0 56 59 NCBI RefSeq GCF_000423385.1-RS_2026_04_07 2026-04-07 2137 2054 65 na GCF_000423405.1 PRJNA224116 SAMN02440658 AUHX00000000.1 na 1122226 369791 Mesonia mobilis DSM 19841 strain=DSM 19841 na latest Scaffold Major Full 2013-07-11 ASM42340v1 DOE Joint Genome Institute GCA_000423405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/405/GCF_000423405.1_ASM42340v1/ na assembly from type material na haploid bacteria 3205558 3200147 35.000000 0 59 63 NCBI RefSeq GCF_000423405.1-RS_2025_12_03 2025-12-03 2979 2901 46 na GCF_000423425.1 PRJNA224116 SAMN02441497 AUHY00000000.1 reference genome 604331 604332 Meiothermus rufus DSM 22234 strain=DSM 22234 na latest Scaffold Major Full 2013-07-11 ASM42342v1 DOE Joint Genome Institute GCA_000423425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/425/GCF_000423425.1_ASM42342v1/ na assembly from type material na haploid bacteria 2747076 2745289 63.000000 0 121 124 NCBI RefSeq GCF_000423425.1-RS_2026_05_02 2026-05-02 2869 2706 48 na GCF_000423445.1 PRJNA224116 SAMN02440839 AUHZ00000000.1 reference genome 1122998 1751 Acidipropionibacterium thoenii DSM 20276 strain=DSM 20276 na latest Scaffold Major Full 2013-07-11 ASM42344v1 DOE Joint Genome Institute GCA_000423445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/445/GCF_000423445.1_ASM42344v1/ na assembly from type material na haploid bacteria 2938072 2937605 68.000000 0 45 47 NCBI RefSeq GCF_000423445.1-RS_2026_05_02 2026-05-02 2700 2560 61 na GCF_000423465.1 PRJNA224116 SAMN02440659 AUIA00000000.1 reference genome 1122999 348582 Propionicicella superfundia DSM 22317 strain=DSM 22317 na latest Scaffold Major Full 2013-07-11 ASM42346v1 DOE Joint Genome Institute GCA_000423465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/465/GCF_000423465.1_ASM42346v1/ na assembly from type material na haploid bacteria 3623963 3617468 70.000000 0 23 36 NCBI RefSeq GCF_000423465.1-RS_2026_05_02 2026-05-02 3360 3271 51 na GCF_000423485.1 PRJNA224116 SAMN02441171 AUIB00000000.1 reference genome 1123001 33012 Propionimicrobium lymphophilum DSM 4903 strain=DSM 4903 na latest Scaffold Major Full 2013-07-11 ASM42348v1 DOE Joint Genome Institute GCA_000423485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/485/GCF_000423485.1_ASM42348v1/ na assembly from type material na haploid bacteria 2035623 2035533 56.000000 0 26 29 NCBI RefSeq GCF_000423485.1-RS_2026_03_30 2026-03-30 1904 1819 54 na GCF_000423505.1 PRJNA224116 SAMN02441498 AUIC00000000.1 reference genome 1123013 452623 Pseudoclavibacter soli DSM 23366 strain=DSM 23366 na latest Scaffold Major Full 2013-07-11 ASM42350v1 DOE Joint Genome Institute GCA_000423505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/505/GCF_000423505.1_ASM42350v1/ na assembly from type material na haploid bacteria 2223047 2222738 64.500000 0 9 10 NCBI RefSeq GCF_000423505.1-RS_2026_05_02 2026-05-02 2091 2014 52 na GCF_000423525.1 PRJNA224116 SAMN02440660 AUID00000000.1 reference genome 1123009 181070 Proteocatella sphenisci DSM 23131 strain=DSM 23131 na latest Scaffold Major Full 2013-07-11 ASM42352v1 DOE Joint Genome Institute GCA_000423525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/525/GCF_000423525.1_ASM42352v1/ na assembly from type material na haploid bacteria 2411055 2408587 36.500000 0 45 47 NCBI RefSeq GCF_000423525.1-RS_2025_12_13 2025-12-13 2353 2284 55 na GCF_000423545.1 PRJNA224116 SAMN02441499 AUIE00000000.1 reference genome 1123020 53412 Metapseudomonas resinovorans DSM 21078 strain=DSM 21078 na latest Scaffold Major Full 2013-07-11 ASM42354v1 DOE Joint Genome Institute GCA_000423545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/545/GCF_000423545.1_ASM42354v1/ na assembly from type material na haploid bacteria 6027681 6023876 63.500000 0 53 60 NCBI RefSeq GCF_000423545.1-RS_2025_12_02 2025-12-02 5637 5484 66 na GCF_000423565.1 PRJNA224116 SAMN02441156 AUIF00000000.1 reference genome 1123078 94255 Runella zeae DSM 19591 strain=DSM 19591 na latest Scaffold Major Full 2013-07-11 ASM42356v1 DOE Joint Genome Institute GCA_000423565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/565/GCF_000423565.1_ASM42356v1/ na assembly from type material na haploid bacteria 7600634 7582644 42.000000 0 85 109 NCBI RefSeq GCF_000423565.1-RS_2025_09_16 2025-09-16 6375 6308 49 na GCF_000423585.1 PRJNA224116 SAMN02440840 AUIG00000000.1 reference genome 1123235 438596 Salinimicrobium xinjiangense DSM 19287 strain=DSM 19287 na latest Scaffold Major Full 2013-07-11 ASM42358v1 DOE Joint Genome Institute GCA_000423585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/585/GCF_000423585.1_ASM42358v1/ na assembly from type material na haploid bacteria 3764506 3756166 41.500000 0 45 54 NCBI RefSeq GCF_000423585.1-RS_2025_12_11 2025-12-11 3389 3322 48 na GCF_000423605.1 PRJNA224116 SAMN02440661 AUIH00000000.1 reference genome 1123228 169438 Saccharospirillum impatiens DSM 12546 strain=DSM 12546 na latest Scaffold Major Full 2013-07-11 ASM42360v1 DOE Joint Genome Institute GCA_000423605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/605/GCF_000423605.1_ASM42360v1/ na assembly from type material na haploid bacteria 4743148 4736515 55.500000 0 148 158 NCBI RefSeq GCF_000423605.1-RS_2026_05_02 2026-05-02 4346 4247 64 na GCF_000423625.1 PRJNA224116 SAMN02441500 AUII00000000.1 reference genome 1123024 54010 Pseudonocardia asaccharolytica DSM 44247 = NBRC 16224 strain=DSM 44247 na latest Scaffold Major Full 2013-07-11 ASM42362v1 DOE Joint Genome Institute GCA_000423625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/625/GCF_000423625.1_ASM42362v1/ na assembly from type material na haploid bacteria 5056835 5054170 72.000000 0 72 74 NCBI RefSeq GCF_000423625.1-RS_2026_05_02 2026-05-02 5123 4893 58 na GCF_000423645.1 PRJNA224116 SAMN02441501 AUIJ00000000.1 reference genome 1123247 552061 Sediminimonas qiaohouensis DSM 21189 strain=DSM 21189 na latest Scaffold Major Full 2013-07-11 ASM42364v1 DOE Joint Genome Institute GCA_000423645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/645/GCF_000423645.1_ASM42364v1/ na assembly from type material na haploid bacteria 3554982 3553881 64.000000 0 67 68 NCBI RefSeq GCF_000423645.1-RS_2026_05_02 2026-05-02 3527 3395 56 na GCF_000423665.1 PRJNA224116 SAMN02440825 AUIK00000000.1 reference genome 1123262 363832 Solirubrobacter soli DSM 22325 strain=DSM 22325 na latest Scaffold Major Full 2013-07-11 ASM42366v1 DOE Joint Genome Institute GCA_000423665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/665/GCF_000423665.1_ASM42366v1/ na assembly from type material na haploid bacteria 9313965 9312238 71.500000 0 50 62 NCBI RefSeq GCF_000423665.1-RS_2025_08_24 2025-08-24 8732 8570 55 na GCF_000423685.1 PRJNA224116 SAMN02441157 AUIL00000000.1 na 1123288 2378 Sporomusa ovata DSM 2662 strain=DSM 2662 na latest Scaffold Major Full 2013-07-11 ASM42368v1 DOE Joint Genome Institute GCA_000423685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/685/GCF_000423685.1_ASM42368v1/ na assembly from type material na haploid bacteria 5221972 5219365 43.500000 0 108 114 NCBI RefSeq GCF_000423685.1-RS_2026_05_16 2026-05-16 5250 5025 142 na GCF_000423705.1 PRJNA224116 SAMN02441158 AUIM00000000.1 reference genome 1123294 71235 Stappia stellulata DSM 5886 strain=DSM 5886 na latest Scaffold Major Full 2013-07-11 ASM42370v1 DOE Joint Genome Institute GCA_000423705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/705/GCF_000423705.1_ASM42370v1/ na assembly from type material na haploid bacteria 4623171 4618579 64.500000 0 12 15 NCBI RefSeq GCF_000423705.1-RS_2026_05_02 2026-05-02 4275 4182 70 na GCF_000423725.1 PRJNA224116 SAMN02441502 AUIN00000000.1 reference genome 1123300 231233 Streptococcus devriesei DSM 19639 strain=DSM 19639 na latest Scaffold Major Full 2013-07-11 ASM42372v1 DOE Joint Genome Institute GCA_000423725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/725/GCF_000423725.1_ASM42372v1/ na assembly from type material na haploid bacteria 2121372 2118276 42.000000 0 17 21 NCBI RefSeq GCF_000423725.1-RS_2026_05_02 2026-05-02 2090 1993 48 na GCF_000423745.1 PRJNA224116 SAMN02441159 AUIO00000000.1 reference genome 1123314 456876 Streptococcus plurextorum DSM 22810 strain=DSM 22810 na latest Scaffold Major Full 2013-07-11 ASM42374v1 DOE Joint Genome Institute GCA_000423745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/745/GCF_000423745.1_ASM42374v1/ na assembly from type material na haploid bacteria 2103464 2100648 41.000000 0 33 37 NCBI RefSeq GCF_000423745.1-RS_2026_05_02 2026-05-02 2144 2042 45 na GCF_000423765.1 PRJNA224116 SAMN02440826 AUIP00000000.1 reference genome 1123315 502567 Streptococcus porci DSM 23759 strain=DSM 23759 na latest Scaffold Major Full 2013-07-11 ASM42376v1 DOE Joint Genome Institute GCA_000423765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/765/GCF_000423765.1_ASM42376v1/ na assembly from type material na haploid bacteria 2290936 2289021 41.000000 0 35 38 NCBI RefSeq GCF_000423765.1-RS_2026_05_02 2026-05-02 2340 2209 42 na GCF_000423785.1 PRJNA224116 SAMN02441160 AUIQ00000000.1 reference genome 1123359 64642 Tetragenococcus muriaticus DSM 15685 strain=DSM 15685 na latest Scaffold Major Full 2013-07-11 ASM42378v1 DOE Joint Genome Institute GCA_000423785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/785/GCF_000423785.1_ASM42378v1/ na assembly from type material na haploid bacteria 2081554 2081234 36.000000 0 109 111 NCBI RefSeq GCF_000423785.1-RS_2026_04_26 2026-04-26 2126 1923 67 na GCF_000423805.1 PRJNA224116 SAMN02441503 AUIR00000000.1 reference genome 1123364 455360 Thalassobaculum salexigens DSM 19539 strain=DSM 19539 na latest Scaffold Major Full 2013-07-11 ASM42380v1 DOE Joint Genome Institute GCA_000423805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/805/GCF_000423805.1_ASM42380v1/ na assembly from type material na haploid bacteria 5084548 5080198 67.500000 0 12 17 NCBI RefSeq GCF_000423805.1-RS_2026_05_02 2026-05-02 4773 4693 64 na GCF_000423825.1 PRJNA224116 SAMN02441488 AUIS00000000.1 na 1123368 929 Thermithiobacillus tepidarius DSM 3134 strain=DSM 3134 na latest Scaffold Major Full 2013-07-11 ASM42382v1 DOE Joint Genome Institute GCA_000423825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/825/GCF_000423825.1_ASM42382v1/ na assembly from type material na haploid bacteria 2958498 2958388 67.000000 0 43 47 NCBI RefSeq GCF_000423825.1-RS_2025_12_11 2025-12-11 2980 2897 62 na GCF_000423845.1 PRJNA224116 SAMN02441489 AUIT00000000.1 reference genome 1123372 53424 Thermodesulfobacterium hveragerdense DSM 12571 strain=DSM 12571 na latest Scaffold Major Full 2013-07-11 ASM42384v1 DOE Joint Genome Institute GCA_000423845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/845/GCF_000423845.1_ASM42384v1/ na assembly from type material na haploid bacteria 1729593 1726163 37.000000 0 42 48 NCBI RefSeq GCF_000423845.1-RS_2026_05_02 2026-05-02 1822 1721 52 na GCF_000423865.1 PRJNA224116 SAMN02440662 AUIU00000000.1 reference genome 1123376 340095 Thermodesulfovibrio thiophilus DSM 17215 strain=DSM 17215 na latest Scaffold Major Full 2013-07-11 ASM42386v1 DOE Joint Genome Institute GCA_000423865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/865/GCF_000423865.1_ASM42386v1/ na assembly from type material na haploid bacteria 1871474 1870937 34.500000 0 18 19 NCBI RefSeq GCF_000423865.1-RS_2026_03_30 2026-03-30 1978 1893 53 na GCF_000423885.1 PRJNA224116 SAMN02440663 AUIV00000000.1 na 1123377 215690 Thermomonas fusca DSM 15424 strain=DSM 15424 na latest Scaffold Major Full 2013-07-11 ASM42388v1 DOE Joint Genome Institute GCA_000423885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/885/GCF_000423885.1_ASM42388v1/ na assembly from type material na haploid bacteria 3151451 3149128 68.000000 0 52 58 NCBI RefSeq GCF_000423885.1-RS_2026_05_05 2026-05-05 3014 2898 57 na GCF_000423905.1 PRJNA224116 SAMN02441490 AUIW00000000.1 na 1123386 88190 Thermus antranikianii DSM 12462 strain=DSM 12462 na latest Scaffold Major Full 2013-07-11 ASM42390v1 DOE Joint Genome Institute GCA_000423905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/905/GCF_000423905.1_ASM42390v1/ na assembly from type material na haploid bacteria 2165150 2163625 65.000000 0 33 34 NCBI RefSeq GCF_000423905.1-RS_2026_03_30 2026-03-30 2328 2229 58 na GCF_000423925.1 PRJNA224116 SAMN02440827 AUIX00000000.1 na 1280664 1280664 Butyrivibrio sp. VCD2006 strain=VCD2006 na latest Scaffold Major Full 2013-07-11 ASM42392v1 DOE Joint Genome Institute GCA_000423925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/925/GCF_000423925.1_ASM42392v1/ na na na haploid bacteria 4705279 4699139 41.000000 0 66 82 NCBI RefSeq GCF_000423925.1-RS_2025_08_25 2025-08-25 4115 3969 77 na GCF_000423945.1 PRJNA224116 SAMN02440664 AUIY00000000.1 na 1280665 1280665 Butyrivibrio sp. XPD2002 strain=XPD2002 na latest Scaffold Major Full 2013-07-11 ASM42394v1 DOE Joint Genome Institute GCA_000423945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/945/GCF_000423945.1_ASM42394v1/ na na na haploid bacteria 4442963 4438133 42.000000 0 47 53 NCBI RefSeq GCF_000423945.1-RS_2025_08_25 2025-08-25 4053 3924 75 na GCF_000423965.1 PRJNA224116 SAMN02440665 AUIZ00000000.1 na 1280667 1280667 Butyrivibrio sp. VCB2001 strain=VCB2001 na latest Scaffold Major Full 2013-07-11 ASM42396v1 DOE Joint Genome Institute GCA_000423965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/965/GCF_000423965.1_ASM42396v1/ na na na haploid bacteria 4016637 4016157 43.500000 0 43 44 NCBI RefSeq GCF_000423965.1-RS_2025_08_25 2025-08-25 3610 3518 66 na GCF_000423985.1 PRJNA224116 SAMN02440828 AUJA00000000.1 na 1280687 831 Butyrivibrio fibrisolvens YRB2005 strain=YRB2005 na latest Scaffold Major Full 2013-07-11 ASM42398v1 DOE Joint Genome Institute GCA_000423985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/423/985/GCF_000423985.1_ASM42398v1/ na na na haploid bacteria 4651802 4651344 40.000000 0 81 82 NCBI RefSeq GCF_000423985.1-RS_2025_03_21 2025-03-21 3949 3839 68 na GCF_000424005.1 PRJNA224116 SAMN02440829 AUJB00000000.1 na 1280688 46206 Pseudobutyrivibrio ruminis CF1b strain=CF1b na latest Scaffold Major Full 2013-07-11 ASM42400v1 DOE Joint Genome Institute GCA_000424005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/005/GCF_000424005.1_ASM42400v1/ na na na haploid bacteria 3271126 3270570 39.500000 0 16 17 NCBI RefSeq GCF_000424005.1-RS_2025_03_21 2025-03-21 2997 2935 53 na GCF_000424025.1 PRJNA224116 SAMN02440830 AUJC00000000.1 reference genome 1280689 29363 Clostridium paraputrificum AGR2156 strain=AGR2156 na latest Scaffold Major Full 2013-07-11 ASM42402v1 DOE Joint Genome Institute GCA_000424025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/025/GCF_000424025.1_ASM42402v1/ na na na haploid bacteria 3561289 3556514 29.500000 0 30 32 NCBI RefSeq GCF_000424025.1-RS_2026_04_14 2026-04-14 3556 3464 68 na GCF_000424045.1 PRJNA224116 SAMN02440831 AUJD00000000.1 na 1280690 1335 Streptococcus equinus B315 strain=B315 na latest Scaffold Major Full 2013-07-11 ASM42404v1 DOE Joint Genome Institute GCA_000424045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/045/GCF_000424045.1_ASM42404v1/ na na na haploid bacteria 1786673 1782308 37.000000 0 9 13 NCBI RefSeq GCF_000424045.1-RS_2026_01_15 2026-01-15 1737 1681 39 na GCF_000424065.1 PRJNA224116 SAMN02441491 AUJE00000000.1 reference genome 1280706 971 Selenomonas ruminantium subsp. ruminantium ATCC 12561 strain=ATCC 12561 na latest Scaffold Major Full 2013-07-11 ASM42406v1 DOE Joint Genome Institute GCA_000424065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/065/GCF_000424065.1_ASM42406v1/ na assembly from type material na haploid bacteria 3387070 3385761 48.000000 0 67 72 NCBI RefSeq GCF_000424065.1-RS_2026_03_12 2026-03-12 3255 3146 77 na GCF_000424085.1 PRJNA224116 SAMN02441492 AUJF00000000.1 na 1280691 418240 Blautia wexlerae AGR2146 strain=AGR2146 na latest Scaffold Major Full 2013-07-11 ASM42408v1 DOE Joint Genome Institute GCA_000424085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/085/GCF_000424085.1_ASM42408v1/ na na na haploid bacteria 3583102 3581157 41.500000 0 189 192 NCBI RefSeq GCF_000424085.1-RS_2025_03_22 2025-03-22 3425 3189 60 na GCF_000424105.1 PRJNA224116 SAMN02440666 AUJG00000000.1 reference genome 1282887 28051 Lachnospira multipara ATCC 19207 strain=ATCC 19207 na latest Scaffold Major Full 2013-07-11 ASM42410v1 DOE Joint Genome Institute GCA_000424105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/105/GCF_000424105.1_ASM42410v1/ na assembly from type material na haploid bacteria 2871860 2869885 35.500000 0 31 32 NCBI RefSeq GCF_000424105.1-RS_2025_12_13 2025-12-13 2608 2528 61 na GCF_000424125.1 PRJNA224116 SAMN02440832 AUJH00000000.1 na 1280671 1280671 Butyrivibrio sp. FC2001 strain=FC2001 na latest Scaffold Major Full 2013-07-11 ASM42412v1 DOE Joint Genome Institute GCA_000424125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/125/GCF_000424125.1_ASM42412v1/ na na na haploid bacteria 4575583 4573762 41.500000 0 39 46 NCBI RefSeq GCF_000424125.1-RS_2025_08_25 2025-08-25 4152 4048 55 na GCF_000424145.1 PRJNA224116 SAMN02440667 AUJI00000000.1 na 1280672 1280672 Butyrivibrio sp. AC2005 strain=AC2005 na latest Scaffold Major Full 2013-07-11 ASM42414v1 DOE Joint Genome Institute GCA_000424145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/145/GCF_000424145.1_ASM42414v1/ na na na haploid bacteria 5126371 5123313 40.000000 0 74 89 NCBI RefSeq GCF_000424145.1-RS_2025_08_25 2025-08-25 4759 4597 75 na GCF_000424165.1 PRJNA224116 SAMN02440668 AUJJ00000000.1 na 1280673 1280673 Butyrivibrio sp. AE3006 strain=AE3006 na latest Scaffold Major Full 2013-07-11 ASM42416v1 DOE Joint Genome Institute GCA_000424165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/165/GCF_000424165.1_ASM42416v1/ na na na haploid bacteria 4147770 4145676 41.500000 0 41 47 NCBI RefSeq GCF_000424165.1-RS_2025_08_25 2025-08-25 3627 3535 57 na GCF_000424185.1 PRJNA224116 SAMN02440817 AUJK00000000.1 na 1280674 1280674 Prevotella sp. AGR2160 strain=AGR2160 na latest Scaffold Major Full 2013-07-11 ASM42418v1 DOE Joint Genome Institute GCA_000424185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/185/GCF_000424185.1_ASM42418v1/ na na na haploid bacteria 2908381 2907354 51.500000 0 49 50 NCBI RefSeq GCF_000424185.1-RS_2025_01_08 2025-01-08 2529 2416 70 na GCF_000424205.1 PRJNA224116 SAMN02440669 AUJL00000000.1 na 1280692 1529 Clostridium cadaveris AGR2141 strain=AGR2141 na latest Scaffold Major Full 2013-07-11 ASM42420v1 DOE Joint Genome Institute GCA_000424205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/205/GCF_000424205.1_ASM42420v1/ na na na haploid bacteria 3542160 3538661 31.000000 0 42 45 NCBI RefSeq GCF_000424205.1-RS_2026_04_14 2026-04-14 3468 3357 76 na GCF_000424225.1 PRJNA224116 SAMN02441493 AUJM00000000.1 na 1280675 1280675 Bifidobacterium sp. AGR2158 strain=AGR2158 na latest Scaffold Major Full 2013-07-11 ASM42422v1 DOE Joint Genome Institute GCA_000424225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/225/GCF_000424225.1_ASM42422v1/ na na na haploid bacteria 2190080 2187350 64.000000 0 19 20 NCBI RefSeq GCF_000424225.1-RS_2025_08_25 2025-08-25 1808 1720 60 na GCF_000424245.1 PRJNA224116 SAMN02441161 AUJN00000000.1 na 1280693 1492 Clostridium butyricum AGR2140 strain=AGR2140 na latest Scaffold Major Full 2013-07-11 ASM42424v1 DOE Joint Genome Institute GCA_000424245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/245/GCF_000424245.1_ASM42424v1/ na na na haploid bacteria 4550822 4549947 28.500000 0 39 42 NCBI RefSeq GCF_000424245.1-RS_2026_03_30 2026-03-30 4185 4068 80 na GCF_000424265.1 PRJNA224116 SAMN02440670 AUJO00000000.1 na 1280676 1280676 Butyrivibrio sp. WCD3002 strain=WCD3002 na latest Scaffold Major Full 2013-07-11 ASM42426v1 DOE Joint Genome Institute GCA_000424265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/265/GCF_000424265.1_ASM42426v1/ na na na haploid bacteria 4254596 4250723 41.500000 0 50 55 NCBI RefSeq GCF_000424265.1-RS_2025_08_25 2025-08-25 3783 3678 60 na GCF_000424285.1 PRJNA224116 SAMN02441494 AUJP00000000.1 na 1280678 1280678 Butyrivibrio sp. MB2005 strain=MB2005 na latest Scaffold Major Full 2013-07-11 ASM42428v1 DOE Joint Genome Institute GCA_000424285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/285/GCF_000424285.1_ASM42428v1/ na na na haploid bacteria 4178539 4176999 41.500000 0 42 48 NCBI RefSeq GCF_000424285.1-RS_2025_08_25 2025-08-25 3699 3600 51 na GCF_000424305.1 PRJNA224116 SAMN02441495 AUJQ00000000.1 na 1280694 46206 Pseudobutyrivibrio ruminis AD2017 strain=AD2017 na latest Scaffold Major Full 2013-07-11 ASM42430v1 DOE Joint Genome Institute GCA_000424305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/305/GCF_000424305.1_ASM42430v1/ na na na haploid bacteria 2912101 2911787 38.500000 0 21 22 NCBI RefSeq GCF_000424305.1-RS_2025_03_21 2025-03-21 2645 2565 61 na GCF_000424325.1 PRJNA224116 SAMN02440671 AUJR00000000.1 na 1280695 1531 [Clostridium] clostridioforme AGR2157 strain=AGR2157 na latest Scaffold Major Full 2013-07-11 ASM42432v1 DOE Joint Genome Institute GCA_000424325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/325/GCF_000424325.1_ASM42432v1/ na na na haploid bacteria 4943165 4939268 49.000000 0 133 138 NCBI RefSeq GCF_000424325.1-RS_2025_03_21 2025-03-21 5065 4639 70 na GCF_000424345.1 PRJNA224116 SAMN02440672 AUJS00000000.1 na 1280698 88431 Dorea longicatena AGR2136 strain=AGR2136 na latest Scaffold Major Full 2013-07-11 ASM42434v1 DOE Joint Genome Institute GCA_000424345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/345/GCF_000424345.1_ASM42434v1/ na na na haploid bacteria 3595079 3591748 41.000000 0 137 146 NCBI RefSeq GCF_000424345.1-RS_2025_03_21 2025-03-21 3635 3387 63 na GCF_000424385.1 PRJNA224116 SAMN02441480 AUJU00000000.1 na 1280680 1280680 Butyrivibrio sp. LC3010 strain=LC3010 na latest Scaffold Major Full 2013-07-11 ASM42438v1 DOE Joint Genome Institute GCA_000424385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/385/GCF_000424385.1_ASM42438v1/ na na na haploid bacteria 4588273 4587408 39.500000 0 66 71 NCBI RefSeq GCF_000424385.1-RS_2025_08_25 2025-08-25 4096 3945 78 na GCF_000424405.1 PRJNA224116 SAMN02440674 AUJV00000000.1 na 1280699 831 Butyrivibrio fibrisolvens WTE3004 strain=WTE3004 na latest Scaffold Major Full 2013-07-11 ASM42440v1 DOE Joint Genome Institute GCA_000424405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/405/GCF_000424405.1_ASM42440v1/ na na na haploid bacteria 4665426 4661921 40.000000 0 87 91 NCBI RefSeq GCF_000424405.1-RS_2025_03_21 2025-03-21 3945 3829 72 na GCF_000424425.1 PRJNA224116 SAMN02440818 AUJW00000000.1 na 1280700 831 Butyrivibrio fibrisolvens FE2007 strain=FE2007 na latest Scaffold Major Full 2013-07-11 ASM42442v1 DOE Joint Genome Institute GCA_000424425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/425/GCF_000424425.1_ASM42442v1/ na na na haploid bacteria 4315442 4315150 39.500000 0 65 68 NCBI RefSeq GCF_000424425.1-RS_2025_03_22 2025-03-22 3711 3600 71 na GCF_000424445.1 PRJNA224116 SAMN02441162 AUJX00000000.1 na 689781 689781 Oribacterium sp. NK2B42 strain=NK2B42 na latest Scaffold Major Full 2013-07-11 ASM42444v1 DOE Joint Genome Institute GCA_000424445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/445/GCF_000424445.1_ASM42444v1/ na na na haploid bacteria 3790484 3782653 43.000000 0 95 105 NCBI RefSeq GCF_000424445.1-RS_2025_08_25 2025-08-25 3383 3223 65 na GCF_000424465.1 PRJNA224116 SAMN02440819 AUJY00000000.1 na 877422 185008 Butyrivibrio hungatei NK4A153 strain=NK4A153 na latest Scaffold Major Full 2013-07-11 ASM42446v1 DOE Joint Genome Institute GCA_000424465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/465/GCF_000424465.1_ASM42446v1/ na na na haploid bacteria 3372542 3366177 41.000000 0 31 39 NCBI RefSeq GCF_000424465.1-RS_2025_03_22 2025-03-22 3121 3043 60 na GCF_000424485.1 PRJNA224116 SAMN02440820 AUJZ00000000.1 na 1280681 1280681 Butyrivibrio sp. WCD2001 strain=WCD2001 na latest Scaffold Major Full 2013-07-11 ASM42448v1 DOE Joint Genome Institute GCA_000424485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/485/GCF_000424485.1_ASM42448v1/ na na na haploid bacteria 4276742 4275672 42.000000 0 59 60 NCBI RefSeq GCF_000424485.1-RS_2025_08_25 2025-08-25 3893 3785 55 na GCF_000424505.1 PRJNA224116 SAMN02440821 AUKA00000000.1 na 1280682 1280682 Butyrivibrio sp. XBB1001 strain=XBB1001 na latest Scaffold Major Full 2013-07-11 ASM42450v1 DOE Joint Genome Institute GCA_000424505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/505/GCF_000424505.1_ASM42450v1/ na na na haploid bacteria 3912001 3909339 40.500000 0 39 41 NCBI RefSeq GCF_000424505.1-RS_2025_08_25 2025-08-25 3406 3308 68 na GCF_000424525.1 PRJNA224116 SAMN02440822 AUKB00000000.1 na 1280684 1280684 Butyrivibrio sp. FCS006 strain=FCS006 na latest Scaffold Major Full 2013-07-11 ASM42452v1 DOE Joint Genome Institute GCA_000424525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/525/GCF_000424525.1_ASM42452v1/ na na na haploid bacteria 3795729 3794795 44.000000 0 12 17 NCBI RefSeq GCF_000424525.1-RS_2025_08_25 2025-08-25 3323 3245 59 na GCF_000424545.1 PRJNA224116 SAMN02441481 AUKC00000000.1 na 1280685 1280685 Butyrivibrio sp. NC3005 strain=NC3005 na latest Scaffold Major Full 2013-07-11 ASM42454v1 DOE Joint Genome Institute GCA_000424545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/545/GCF_000424545.1_ASM42454v1/ na na na haploid bacteria 3871453 3870478 35.500000 0 93 103 NCBI RefSeq GCF_000424545.1-RS_2025_08_25 2025-08-25 3379 3252 68 na GCF_000424565.1 PRJNA224116 SAMN02440823 AUKD00000000.1 na 1280703 831 Butyrivibrio fibrisolvens MD2001 strain=MD2001 na latest Scaffold Major Full 2013-07-11 ASM42456v1 DOE Joint Genome Institute GCA_000424565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/565/GCF_000424565.1_ASM42456v1/ na na na haploid bacteria 4738960 4738690 39.500000 0 66 68 NCBI RefSeq GCF_000424565.1-RS_2025_03_21 2025-03-21 4007 3893 76 na GCF_000424585.1 PRJNA224116 SAMN02441163 AUKE00000000.1 na 1280686 1280686 Butyrivibrio sp. MC2013 strain=MC2013 na latest Scaffold Major Full 2013-07-11 ASM42458v1 DOE Joint Genome Institute GCA_000424585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/585/GCF_000424585.1_ASM42458v1/ na na na haploid bacteria 3813073 3812603 44.000000 0 48 51 NCBI RefSeq GCF_000424585.1-RS_2025_08_25 2025-08-25 3248 3131 70 na GCF_000424605.1 PRJNA224116 SAMN02441482 AUKF00000000.1 na 1280705 305719 Segatella baroniae C21a strain=C21a na latest Scaffold Major Full 2013-07-11 ASM42460v1 DOE Joint Genome Institute GCA_000424605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/605/GCF_000424605.1_ASM42460v1/ na na na haploid bacteria 3249285 3245049 38.500000 0 22 29 NCBI RefSeq GCF_000424605.1-RS_2025_01_30 2025-01-30 2648 2524 81 na GCF_000424625.1 PRJNA224116 SAMN02440675 AUKG00000000.1 na 1283299 191495 Conexibacter woesei Iso977N strain=Iso977N na latest Scaffold Major Full 2013-07-11 ASM42462v1 DOE Joint Genome Institute GCA_000424625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/625/GCF_000424625.1_ASM42462v1/ na na na haploid bacteria 5695417 5695228 72.500000 0 9 10 NCBI RefSeq GCF_000424625.1-RS_2025_03_13 2025-03-13 5517 5435 52 na GCF_000424645.1 PRJNA224116 SAMN02441483 AUKH00000000.1 na 1283286 1283286 Gillisia sp. JM1 strain=JM1 na latest Scaffold Major Full 2013-07-11 ASM42464v1 DOE Joint Genome Institute GCA_000424645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/645/GCF_000424645.1_ASM42464v1/ na na na haploid bacteria 4143611 4114490 35.000000 0 9 14 NCBI RefSeq GCF_000424645.1-RS_2025_01_08 2025-01-08 3739 3644 45 na GCF_000424665.1 PRJNA224116 SAMN02440676 AUKI00000000.1 reference genome 1123234 470866 Salinimicrobium terrae DSM 17865 strain=DSM 17865 na latest Scaffold Major Full 2013-07-11 ASM42466v1 DOE Joint Genome Institute GCA_000424665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/665/GCF_000424665.1_ASM42466v1/ na assembly from type material na haploid bacteria 3544726 3542840 40.500000 0 20 24 NCBI RefSeq GCF_000424665.1-RS_2026_05_02 2026-05-02 3193 3125 52 na GCF_000424685.1 PRJNA224116 SAMN02441148 AUKJ00000000.1 na 1224744 414 Methylococcus capsulatus str. Texas = ATCC 19069 strain=ATCC 19069 na latest Scaffold Major Full 2013-07-11 ASM42468v1 DOE Joint Genome Institute GCA_000424685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/685/GCF_000424685.1_ASM42468v1/ na assembly from type material na haploid bacteria 3266263 3263814 63.500000 0 20 24 NCBI RefSeq GCF_000424685.1-RS_2026_05_16 2026-05-16 3071 2961 66 na GCF_000424725.1 PRJNA224116 SAMN02441149 AUKL00000000.1 na 1288085 168697 Salinispora arenicola CNH963 strain=CNH963 na latest Scaffold Major Full 2013-07-11 ASM42472v1 DOE Joint Genome Institute GCA_000424725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/725/GCF_000424725.1_ASM42472v1/ na na na haploid bacteria 5440051 5435862 69.500000 0 105 113 NCBI RefSeq GCF_000424725.1-RS_2026_05_12 2026-05-12 4995 4643 61 na GCF_000424745.1 PRJNA224116 SAMN02441150 AUKM00000000.1 na 1288086 168697 Salinispora arenicola CNS299 strain=CNS299 na latest Scaffold Major Full 2013-07-11 ASM42474v1 DOE Joint Genome Institute GCA_000424745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/745/GCF_000424745.1_ASM42474v1/ na na na haploid bacteria 5746562 5739857 69.500000 0 63 69 NCBI RefSeq GCF_000424745.1-RS_2026_05_12 2026-05-12 5183 4941 65 na GCF_000424765.1 PRJNA224116 SAMN02440809 AUKN00000000.1 na 1288079 1288079 Streptomyces sp. CNT318 strain=CNT318 na latest Scaffold Major Full 2013-07-11 ASM42476v1 DOE Joint Genome Institute GCA_000424765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/765/GCF_000424765.1_ASM42476v1/ na na na haploid bacteria 7284201 7281654 73.000000 0 59 62 NCBI RefSeq GCF_000424765.1-RS_2026_05_12 2026-05-12 6298 6088 78 na GCF_000424785.1 PRJNA224116 SAMN02440677 AUKO00000000.1 na 1288080 1288080 Streptomyces sp. CNT360 strain=CNT360 na latest Scaffold Major Full 2013-07-11 ASM42478v1 DOE Joint Genome Institute GCA_000424785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/785/GCF_000424785.1_ASM42478v1/ na na na haploid bacteria 7720660 7710989 72.500000 0 41 55 NCBI RefSeq GCF_000424785.1-RS_2026_05_12 2026-05-12 6659 6388 73 na GCF_000424805.1 PRJNA224116 SAMN02441151 AUKP00000000.1 na 1288081 1288081 Streptomyces sp. CNQ865 strain=CNQ865 na latest Scaffold Major Full 2013-07-11 ASM42480v1 DOE Joint Genome Institute GCA_000424805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/805/GCF_000424805.1_ASM42480v1/ na na na haploid bacteria 8612798 8612098 73.500000 0 101 102 NCBI RefSeq GCF_000424805.1-RS_2026_05_12 2026-05-12 7429 7261 73 na GCF_000424825.1 PRJNA224116 SAMN02441484 AUKQ00000000.1 na 1288082 1288082 Streptomyces sp. CNH287 strain=CNH287 na latest Scaffold Major Full 2013-07-11 ASM42482v1 DOE Joint Genome Institute GCA_000424825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/825/GCF_000424825.1_ASM42482v1/ na na na haploid bacteria 6788521 6787926 72.500000 0 48 53 NCBI RefSeq GCF_000424825.1-RS_2026_05_12 2026-05-12 6244 6055 74 na GCF_000424845.1 PRJNA224116 SAMN02440678 AUKR00000000.1 na 1288083 1288083 Streptomyces sp. TAA040 strain=TAA040 na latest Scaffold Major Full 2013-07-11 ASM42484v1 DOE Joint Genome Institute GCA_000424845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/845/GCF_000424845.1_ASM42484v1/ na na na haploid bacteria 5311812 5311552 72.500000 0 74 77 NCBI RefSeq GCF_000424845.1-RS_2026_05_12 2026-05-12 4811 4503 74 na GCF_000424865.1 PRJNA224116 SAMN02440679 AUKS00000000.1 na 1288084 168695 Salinispora tropica CNT261 strain=CNT261 na latest Scaffold Major Full 2013-07-11 ASM42486v1 DOE Joint Genome Institute GCA_000424865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/865/GCF_000424865.1_ASM42486v1/ na na na haploid bacteria 5510329 5505253 69.500000 0 96 103 NCBI RefSeq GCF_000424865.1-RS_2026_05_12 2026-05-12 5205 4922 66 na GCF_000424885.1 PRJNA224116 SAMN02441485 AUKT00000000.1 na 1288087 168697 Salinispora arenicola CNS243 strain=CNS243 na latest Scaffold Major Full 2013-07-11 ASM42488v1 DOE Joint Genome Institute GCA_000424885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/885/GCF_000424885.1_ASM42488v1/ na na na haploid bacteria 5761551 5753058 69.500000 0 70 85 NCBI RefSeq GCF_000424885.1-RS_2026_05_12 2026-05-12 5116 4874 64 na GCF_000424905.1 PRJNA224116 SAMN02441516 AUGH00000000.1 na 999545 999545 Salinispora mooreana strain=CNS-237 na latest Scaffold Major Full 2013-07-11 ASM42490v1 DOE Joint Genome Institute GCA_000424905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/905/GCF_000424905.1_ASM42490v1/ na na na haploid bacteria 5243134 5236667 69.500000 0 67 78 NCBI RefSeq GCF_000424905.1-RS_2026_05_12 2026-05-12 4864 4532 65 na GCF_000424925.1 PRJNA224116 SAMN02440810 AUKU00000000.1 na 1288090 351187 Salinispora pacifica CNY239 strain=CNY239 na latest Scaffold Major Full 2013-07-11 ASM42492v1 DOE Joint Genome Institute GCA_000424925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/925/GCF_000424925.1_ASM42492v1/ na na na haploid bacteria 5368602 5366801 70.000000 0 88 93 NCBI RefSeq GCF_000424925.1-RS_2026_05_12 2026-05-12 4944 4691 68 na GCF_000424945.1 PRJNA224116 SAMN02440811 AUKV00000000.1 na 1172179 1172179 Streptomyces sp. 142MFCol3.1 strain=142MFCol3.1 na latest Scaffold Major Full 2013-07-11 ASM42494v1 DOE Joint Genome Institute GCA_000424945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/945/GCF_000424945.1_ASM42494v1/ na na na haploid bacteria 9726042 9725942 71.000000 0 99 100 NCBI RefSeq GCF_000424945.1-RS_2025_03_25 2025-03-25 8760 8336 84 na GCF_000424965.1 PRJNA224116 SAMN02441152 AUKW00000000.1 na 1289387 1289387 Streptomyces sp. TAA204 strain=TAA204 na latest Scaffold Major Full 2013-07-11 ASM42496v1 DOE Joint Genome Institute GCA_000424965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/965/GCF_000424965.1_ASM42496v1/ na na na haploid bacteria 6582155 6581339 71.000000 0 39 45 NCBI RefSeq GCF_000424965.1-RS_2026_05_12 2026-05-12 5559 5381 75 na GCF_000424985.1 PRJNA224116 SAMN02440812 AUKX00000000.1 reference genome 1121012 86104 Arenibacter latericius DSM 15913 strain=DSM 15913 na latest Scaffold Major Full 2013-07-11 ASM42498v1 DOE Joint Genome Institute GCA_000424985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/424/985/GCF_000424985.1_ASM42498v1/ na assembly from type material na haploid bacteria 4480165 4477675 37.000000 0 104 113 NCBI RefSeq GCF_000424985.1-RS_2025_12_11 2025-12-11 3756 3663 47 na GCF_000425005.1 PRJNA224116 SAMN02441153 AUKY00000000.1 na 1123263 102148 Solobacterium moorei DSM 22971 strain=DSM 22971 na latest Scaffold Major Full 2013-07-11 ASM42500v1 DOE Joint Genome Institute GCA_000425005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/005/GCF_000425005.1_ASM42500v1/ na assembly from type material na haploid bacteria 2335946 2335456 37.000000 0 169 170 NCBI RefSeq GCF_000425005.1-RS_2026_05_02 2026-05-02 2475 2371 51 na GCF_000425025.1 PRJNA224116 SAMN02441486 AUKZ00000000.1 reference genome 1123299 254786 Streptococcus castoreus DSM 17536 strain=DSM 17536 na latest Scaffold Major Full 2013-07-11 ASM42502v1 DOE Joint Genome Institute GCA_000425025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/025/GCF_000425025.1_ASM42502v1/ na assembly from type material na haploid bacteria 1883536 1881652 38.000000 0 42 46 NCBI RefSeq GCF_000425025.1-RS_2026_04_21 2026-04-21 1861 1741 34 na GCF_000425045.1 PRJNA224116 SAMN02441487 AULA00000000.1 na 1120921 187327 Acidaminococcus intestini DSM 21505 strain=DSM 21505 na latest Scaffold Major Full 2013-07-11 ASM42504v1 DOE Joint Genome Institute GCA_000425045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/045/GCF_000425045.1_ASM42504v1/ na assembly from type material na haploid bacteria 2282467 2278607 50.000000 0 55 57 NCBI RefSeq GCF_000425045.1-RS_2026_03_31 2026-03-31 2228 2115 63 na GCF_000425065.1 PRJNA224116 SAMN02441154 AULB00000000.1 reference genome 1120937 31962 Actinomadura rifamycini DSM 43936 strain=DSM 43936 na latest Scaffold Major Full 2013-07-11 ASM42506v1 DOE Joint Genome Institute GCA_000425065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/065/GCF_000425065.1_ASM42506v1/ na assembly from type material na haploid bacteria 8385432 8385207 74.000000 0 75 79 NCBI RefSeq GCF_000425065.1-RS_2026_04_21 2026-04-21 7737 7572 74 na GCF_000425085.1 PRJNA224116 SAMN02440813 AULC00000000.1 na 1120952 51665 Aerococcus urinaeequi DSM 20341 = CCUG 28094 strain=DSM 20341 na latest Scaffold Major Full 2013-07-11 ASM42508v1 DOE Joint Genome Institute GCA_000425085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/085/GCF_000425085.1_ASM42508v1/ na assembly from type material na haploid bacteria 1992132 1990332 39.500000 0 9 11 NCBI RefSeq GCF_000425085.1-RS_2026_03_31 2026-03-31 1852 1769 60 na GCF_000425105.1 PRJNA224116 SAMN02440814 AULD00000000.1 reference genome 1120958 341722 Agrococcus lahaulensis DSM 17612 strain=DSM 17612 na latest Scaffold Major Full 2013-07-11 ASM42510v1 DOE Joint Genome Institute GCA_000425105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/105/GCF_000425105.1_ASM42510v1/ na assembly from type material na haploid bacteria 2677837 2676602 72.500000 0 13 18 NCBI RefSeq GCF_000425105.1-RS_2026_05_02 2026-05-02 2690 2623 51 na GCF_000425125.1 PRJNA224116 SAMN02440680 AULE00000000.1 reference genome 1122926 401638 Paenibacillus taiwanensis DSM 18679 strain=DSM 18679 na latest Scaffold Major Full 2013-07-11 ASM42512v1 DOE Joint Genome Institute GCA_000425125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/125/GCF_000425125.1_ASM42512v1/ na assembly from type material na haploid bacteria 5247653 5242860 45.000000 0 20 36 NCBI RefSeq GCF_000425125.1-RS_2026_05_02 2026-05-02 4730 4592 88 na GCF_000425145.1 PRJNA224116 SAMN02440815 AULF00000000.1 reference genome 540906 1122941 Pedobacter glucosidilyticus DSM 23534 strain=DSM 23534 na latest Scaffold Major Full 2013-07-11 ASM42514v1 DOE Joint Genome Institute GCA_000425145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/145/GCF_000425145.1_ASM42514v1/ na assembly from type material na haploid bacteria 4021020 4015711 34.500000 0 62 71 NCBI RefSeq GCF_000425145.1-RS_2026_05_02 2026-05-02 3495 3423 52 na GCF_000425165.1 PRJNA224116 SAMN02441155 AULG00000000.1 reference genome 1122959 265726 Photobacterium halotolerans DSM 18316 strain=DSM 18316 na latest Scaffold Major Full 2013-07-11 ASM42516v1 DOE Joint Genome Institute GCA_000425165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/165/GCF_000425165.1_ASM42516v1/ na assembly from type material na haploid bacteria 4690166 4680007 51.000000 0 53 62 NCBI RefSeq GCF_000425165.1-RS_2026_03_30 2026-03-30 4304 4181 76 na GCF_000425185.1 PRJNA224116 SAMN02440681 AULH00000000.1 reference genome 1122962 257440 Pleomorphomonas koreensis DSM 23070 strain=DSM 23070 na latest Scaffold Major Full 2013-07-11 ASM42518v1 DOE Joint Genome Institute GCA_000425185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/185/GCF_000425185.1_ASM42518v1/ na assembly from type material na haploid bacteria 4620652 4619994 67.000000 0 73 76 NCBI RefSeq GCF_000425185.1-RS_2026_05_02 2026-05-02 4382 4257 57 na GCF_000425205.1 PRJNA224116 SAMN02441140 AULI00000000.1 na 1385510 516704 Pontibacillus halophilus JSM 076056 = DSM 19796 strain=DSM 19796 na latest Scaffold Major Full 2013-07-11 ASM42520v1 DOE Joint Genome Institute GCA_000425205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/205/GCF_000425205.1_ASM42520v1/ na assembly from type material na haploid bacteria 3670551 3669521 42.500000 0 36 38 NCBI RefSeq GCF_000425205.1-RS_2026_03_30 2026-03-30 3818 3713 76 na GCF_000425225.1 PRJNA224116 SAMN02440682 AULJ00000000.1 na 1385511 273164 Pontibacillus marinus BH030004 = DSM 16465 strain=DSM 16465 na latest Scaffold Major Full 2013-07-11 ASM42522v1 DOE Joint Genome Institute GCA_000425225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/225/GCF_000425225.1_ASM42522v1/ na assembly from type material na haploid bacteria 4276966 4272944 38.500000 0 77 100 NCBI RefSeq GCF_000425225.1-RS_2026_01_15 2026-01-15 4291 4196 67 na GCF_000425245.1 PRJNA224116 SAMN02440858 AUDB00000000.1 na 1121451 191026 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 strain=DSM 14728 na latest Scaffold Major Full 2013-07-11 ASM42524v1 DOE Joint Genome Institute GCA_000425245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/245/GCF_000425245.1_ASM42524v1/ na assembly from type material na haploid bacteria 3659215 3657135 45.000000 0 31 33 NCBI RefSeq GCF_000425245.1-RS_2025_09_10 2025-09-10 3302 3203 80 na GCF_000425265.1 PRJNA224116 SAMN02441537 AUDC00000000.1 reference genome 1121467 82171 Maridesulfovibrio zosterae DSM 11974 strain=DSM 11974 na latest Scaffold Major Full 2013-07-11 ASM42526v1 DOE Joint Genome Institute GCA_000425265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/265/GCF_000425265.1_ASM42526v1/ na assembly from type material na haploid bacteria 4092653 4090158 42.000000 0 15 20 NCBI RefSeq GCF_000425265.1-RS_2026_05_02 2026-05-02 3681 3581 77 na GCF_000425285.1 PRJNA224116 SAMN02441538 AUDD00000000.1 na 1122997 1749 Acidipropionibacterium jensenii DSM 20535 strain=DSM 20535 na latest Scaffold Major Full 2013-07-11 ASM42528v1 DOE Joint Genome Institute GCA_000425285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/285/GCF_000425285.1_ASM42528v1/ na assembly from type material na haploid bacteria 3028354 3027984 68.500000 0 56 57 NCBI RefSeq GCF_000425285.1-RS_2026_05_02 2026-05-02 2783 2633 58 na GCF_000425305.1 PRJNA224116 SAMN02440859 AUDE00000000.1 reference genome 1123037 49278 Psychroserpens burtonensis DSM 12212 strain=DSM 12212 na latest Scaffold Major Full 2013-07-11 ASM42530v1 DOE Joint Genome Institute GCA_000425305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/305/GCF_000425305.1_ASM42530v1/ na assembly from type material na haploid bacteria 3976448 3971486 33.500000 0 68 73 NCBI RefSeq GCF_000425305.1-RS_2026_05_02 2026-05-02 3595 3509 42 na GCF_000425325.1 PRJNA224116 SAMN02440627 AUDF00000000.1 na 1123052 145458 Rathayibacter toxicus DSM 7488 strain=DSM 7488 na latest Scaffold Major Full 2013-07-11 ASM42532v1 DOE Joint Genome Institute GCA_000425325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/325/GCF_000425325.1_ASM42532v1/ na assembly from type material na haploid bacteria 2299693 2291916 61.500000 0 29 35 NCBI RefSeq GCF_000425325.1-RS_2025_12_23 2025-12-23 2158 2073 58 na GCF_000425345.1 PRJNA224116 SAMN02441194 AUDG00000000.1 na 1123053 67576 Rheinheimera baltica DSM 14885 strain=DSM 14885 na latest Scaffold Major Full 2013-07-11 ASM42534v1 DOE Joint Genome Institute GCA_000425345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/345/GCF_000425345.1_ASM42534v1/ na assembly from type material na haploid bacteria 4351767 4349122 46.000000 0 134 138 NCBI RefSeq GCF_000425345.1-RS_2026_03_31 2026-03-31 4102 3965 71 na GCF_000425365.1 PRJNA224116 SAMN02440628 AUDH00000000.1 reference genome 1123072 182403 Rubritepida flocculans DSM 14296 strain=DSM 14296 na latest Scaffold Major Full 2013-07-11 ASM42536v1 DOE Joint Genome Institute GCA_000425365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/365/GCF_000425365.1_ASM42536v1/ na assembly from type material na haploid bacteria 3834117 3833543 73.500000 0 74 76 NCBI RefSeq GCF_000425365.1-RS_2025_12_15 2025-12-15 3843 3740 50 na GCF_000425385.1 PRJNA224116 SAMN02440629 AUDI00000000.1 reference genome 1121480 246602 Pseudoduganella violaceinigra DSM 15887 strain=DSM 15887 na latest Scaffold Major Full 2013-07-11 ASM42538v1 DOE Joint Genome Institute GCA_000425385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/385/GCF_000425385.1_ASM42538v1/ na assembly from type material na haploid bacteria 6110349 6103405 63.000000 0 41 48 NCBI RefSeq GCF_000425385.1-RS_2025_08_26 2025-08-26 5824 5692 83 na GCF_000425405.1 PRJNA224116 SAMN02441539 AUDJ00000000.1 reference genome 1121879 364763 Ferrimonas kyonanensis DSM 18153 strain=DSM 18153 na latest Scaffold Major Full 2013-07-11 ASM42540v1 DOE Joint Genome Institute GCA_000425405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/405/GCF_000425405.1_ASM42540v1/ na assembly from type material na haploid bacteria 4930960 4918376 57.000000 0 40 56 NCBI RefSeq GCF_000425405.1-RS_2026_05_02 2026-05-02 4538 4441 66 na GCF_000425425.1 PRJNA224116 SAMN02440860 AUDK00000000.1 reference genome 1121887 350893 Flavobacterium daejeonense DSM 17708 strain=DSM 17708 na latest Scaffold Major Full 2013-07-11 ASM42542v1 DOE Joint Genome Institute GCA_000425425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/425/GCF_000425425.1_ASM42542v1/ na assembly from type material na haploid bacteria 4244138 4240527 34.500000 0 49 52 NCBI RefSeq GCF_000425425.1-RS_2025_11_21 2025-11-21 3643 3554 57 na GCF_000425445.1 PRJNA224116 SAMN02441540 AUDL00000000.1 reference genome 1121888 281361 Flavobacterium denitrificans DSM 15936 strain=DSM 15936 na latest Scaffold Major Full 2013-07-11 ASM42544v1 DOE Joint Genome Institute GCA_000425445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/445/GCF_000425445.1_ASM42544v1/ na assembly from type material na haploid bacteria 4823485 4820298 34.000000 0 24 31 NCBI RefSeq GCF_000425445.1-RS_2026_04_29 2026-04-29 4134 4056 62 na GCF_000425465.1 PRJNA224116 SAMN02440630 AUDM00000000.1 reference genome 1121889 370974 Flavobacterium filum DSM 17961 strain=DSM 17961 na latest Scaffold Major Full 2013-07-11 ASM42546v1 DOE Joint Genome Institute GCA_000425465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/465/GCF_000425465.1_ASM42546v1/ na assembly from type material na haploid bacteria 3192093 3188694 34.000000 0 50 53 NCBI RefSeq GCF_000425465.1-RS_2026_05_02 2026-05-02 2885 2816 50 na GCF_000425485.1 PRJNA224116 SAMN02440861 AUDN00000000.1 reference genome 1121901 150172 Flavobacterium tegetincola DSM 22377 strain=DSM 22377 na latest Scaffold Major Full 2013-07-11 ASM42548v1 DOE Joint Genome Institute GCA_000425485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/485/GCF_000425485.1_ASM42548v1/ na assembly from type material na haploid bacteria 3774544 3766984 35.000000 0 41 54 NCBI RefSeq GCF_000425485.1-RS_2026_05_02 2026-05-02 3408 3325 48 na GCF_000425505.1 PRJNA224116 SAMN02440631 AUDO00000000.1 reference genome 1121890 99286 Flavobacterium frigidarium DSM 17623 strain=DSM 17623 na latest Scaffold Major Full 2013-07-11 ASM42550v1 DOE Joint Genome Institute GCA_000425505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/505/GCF_000425505.1_ASM42550v1/ na assembly from type material na haploid bacteria 3631041 3627910 34.000000 0 36 39 NCBI RefSeq GCF_000425505.1-RS_2025_12_02 2025-12-02 3174 3100 53 na GCF_000425525.1 PRJNA224116 SAMN02441541 AUDP00000000.1 na 1123075 438033 Ruminococcus gauvreauii DSM 19829 strain=DSM 19829 na latest Scaffold Major Full 2013-07-11 ASM42552v1 DOE Joint Genome Institute GCA_000425525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/525/GCF_000425525.1_ASM42552v1/ na assembly from type material na haploid bacteria 4094708 4094278 47.500000 0 70 71 NCBI RefSeq GCF_000425525.1-RS_2026_04_14 2026-04-14 3873 3754 66 na GCF_000425545.1 PRJNA224116 SAMN02441542 AUDQ00000000.1 na 1123290 1571 Sporosarcina ureae DSM 2281 strain=DSM 2281 na latest Scaffold Major Full 2013-07-11 ASM42554v1 DOE Joint Genome Institute GCA_000425545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/545/GCF_000425545.1_ASM42554v1/ na assembly from type material na haploid bacteria 3318653 3318232 41.500000 0 35 36 NCBI RefSeq GCF_000425545.1-RS_2026_03_30 2026-03-30 3345 3234 77 na GCF_000425565.1 PRJNA224116 SAMN02440862 AUDR00000000.1 reference genome 1123354 203471 Tepidiphilus margaritifer DSM 15129 strain=DSM 15129 na latest Scaffold Major Full 2013-07-11 ASM42556v1 DOE Joint Genome Institute GCA_000425565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/565/GCF_000425565.1_ASM42556v1/ na assembly from type material na haploid bacteria 2220236 2218222 65.000000 0 19 22 NCBI RefSeq GCF_000425565.1-RS_2026_05_02 2026-05-02 2197 2116 55 na GCF_000425585.1 PRJNA224116 SAMN02440863 AUDS00000000.1 reference genome 1123356 249 Terrimonas ferruginea DSM 30193 strain=DSM 30193 na latest Scaffold Major Full 2013-07-11 ASM42558v1 DOE Joint Genome Institute GCA_000425585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/585/GCF_000425585.1_ASM42558v1/ na assembly from type material na haploid bacteria 4686152 4683007 48.000000 0 30 40 NCBI RefSeq GCF_000425585.1-RS_2026_05_02 2026-05-02 4009 3947 46 na GCF_000425605.1 PRJNA224116 SAMN02440632 AUDT00000000.1 na 1158173 1158173 Thioalkalivibrio sp. ALE17 strain=ALE17 na latest Scaffold Major Full 2013-07-11 ASM42560v1 DOE Joint Genome Institute GCA_000425605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/605/GCF_000425605.1_ASM42560v1/ na na na haploid bacteria 2776528 2775105 67.500000 0 27 30 NCBI RefSeq GCF_000425605.1-RS_2024_08_13 2024-08-13 2664 2570 55 na GCF_000425625.1 PRJNA224116 SAMN02441543 AUDU00000000.1 reference genome 1292027 291995 Stutzerimonas azotifigens DSM 17556 strain=DSM 17556 na latest Scaffold Major Full 2013-07-11 ASM42562v1 DOE Joint Genome Institute GCA_000425625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/625/GCF_000425625.1_ASM42562v1/ na assembly from type material na haploid bacteria 5017423 4997424 67.000000 0 59 100 NCBI RefSeq GCF_000425625.1-RS_2025_12_11 2025-12-11 4634 4512 61 24179119 GCF_000425645.1 PRJNA224116 SAMN02441528 AUDV00000000.1 reference genome 1121909 311208 Gaetbulibacter saemankumensis DSM 17032 strain=DSM 17032 na latest Scaffold Major Full 2013-07-11 ASM42564v1 DOE Joint Genome Institute GCA_000425645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/645/GCF_000425645.1_ASM42564v1/ na assembly from type material na haploid bacteria 3089149 3088509 34.500000 0 11 12 NCBI RefSeq GCF_000425645.1-RS_2025_12_11 2025-12-11 2704 2643 50 na GCF_000425665.1 PRJNA224116 SAMN02440633 AUDW00000000.1 reference genome 1121914 150240 Gemella cuniculi DSM 15828 strain=DSM 15828 na latest Scaffold Major Full 2013-07-11 ASM42566v1 DOE Joint Genome Institute GCA_000425665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/665/GCF_000425665.1_ASM42566v1/ na assembly from type material na haploid bacteria 1869681 1864820 29.000000 0 31 40 NCBI RefSeq GCF_000425665.1-RS_2026_05_02 2026-05-02 1752 1684 54 na GCF_000425685.1 PRJNA224116 SAMN02441529 AUDX00000000.1 na 1121934 256821 Gulosibacter molinativorax DSM 13485 strain=DSM 13485 na latest Scaffold Major Full 2013-07-11 ASM42568v1 DOE Joint Genome Institute GCA_000425685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/685/GCF_000425685.1_ASM42568v1/ na assembly from type material na haploid bacteria 3379129 3378714 64.500000 0 79 82 NCBI RefSeq GCF_000425685.1-RS_2026_05_02 2026-05-02 3190 3092 54 na GCF_000425705.1 PRJNA224116 SAMN02441195 AUDY00000000.1 reference genome 1121938 302481 Halobacillus kuroshimensis DSM 18393 strain=DSM 18393 na latest Scaffold Major Full 2013-07-11 ASM42570v1 DOE Joint Genome Institute GCA_000425705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/705/GCF_000425705.1_ASM42570v1/ na assembly from type material na haploid bacteria 3845569 3843644 47.000000 0 15 16 NCBI RefSeq GCF_000425705.1-RS_2026_04_26 2026-04-26 3976 3886 71 na GCF_000425725.1 PRJNA224116 SAMN02440634 AUDZ00000000.1 reference genome 1121940 176290 Halomonas halocynthiae DSM 14573 strain=DSM 14573 na latest Scaffold Major Full 2013-07-11 ASM42572v1 DOE Joint Genome Institute GCA_000425725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/725/GCF_000425725.1_ASM42572v1/ na assembly from type material na haploid bacteria 2876467 2874224 54.000000 0 12 19 NCBI RefSeq GCF_000425725.1-RS_2026_03_30 2026-03-30 2715 2625 63 na GCF_000425745.1 PRJNA224116 SAMN02441180 AUEA00000000.1 reference genome 1215098 157783 Pseudomonas cremoricolorata DSM 17059 = NBRC 16634 strain=DSM 17059 na latest Scaffold Major Full 2013-07-11 ASM42574v1 DOE Joint Genome Institute GCA_000425745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/745/GCF_000425745.1_ASM42574v1/ na assembly from type material na haploid bacteria 4655082 4653767 63.500000 0 26 28 NCBI RefSeq GCF_000425745.1-RS_2026_05_02 2026-05-02 4246 4114 71 na GCF_000425765.1 PRJNA224116 SAMN02441530 AUEB00000000.1 na 1215114 157782 Pseudomonas parafulva NBRC 16636 = DSM 17004 strain=DSM 17004 na latest Scaffold Major Full 2013-07-11 ASM42576v1 DOE Joint Genome Institute GCA_000425765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/765/GCF_000425765.1_ASM42576v1/ na assembly from type material na haploid bacteria 4956622 4950980 62.500000 0 32 40 NCBI RefSeq GCF_000425765.1-RS_2026_05_16 2026-05-16 4558 4405 64 na GCF_000425785.1 PRJNA224116 SAMN02440864 AUEC00000000.1 reference genome 1292030 470150 Pseudomonas taiwanensis DSM 21245 strain=DSM 21245 na latest Scaffold Major Full 2013-07-11 ASM42578v1 DOE Joint Genome Institute GCA_000425785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/785/GCF_000425785.1_ASM42578v1/ na assembly from type material na haploid bacteria 5415134 5412738 62.000000 0 67 74 NCBI RefSeq GCF_000425785.1-RS_2026_04_26 2026-04-26 5091 4921 70 na GCF_000425805.1 PRJNA224116 SAMN02441181 AUED00000000.1 na 1292031 321661 Pseudomonas vranovensis DSM 16006 strain=DSM 16006 na latest Scaffold Major Full 2013-07-11 ASM42580v1 DOE Joint Genome Institute GCA_000425805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/805/GCF_000425805.1_ASM42580v1/ na assembly from type material na haploid bacteria 5697807 5696297 61.500000 0 36 43 NCBI RefSeq GCF_000425805.1-RS_2026_04_29 2026-04-29 5349 5192 68 na GCF_000425825.1 PRJNA224116 SAMN02441531 AUEE00000000.1 reference genome 1122128 516700 Jeotgalicoccus marinus DSM 19772 strain=DSM 19772 na latest Scaffold Major Full 2013-07-11 ASM42582v1 DOE Joint Genome Institute GCA_000425825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/825/GCF_000425825.1_ASM42582v1/ na assembly from type material na haploid bacteria 2109822 2108662 37.000000 0 26 29 NCBI RefSeq GCF_000425825.1-RS_2026_05_02 2026-05-02 2262 2160 65 na GCF_000425845.1 PRJNA224116 SAMN02441182 AUEF00000000.1 reference genome 1122129 157228 Jeotgalicoccus psychrophilus DSM 19085 strain=DSM 19085 na latest Scaffold Major Full 2013-07-11 ASM42584v1 DOE Joint Genome Institute GCA_000425845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/845/GCF_000425845.1_ASM42584v1/ na assembly from type material na haploid bacteria 2345682 2344662 40.000000 0 28 33 NCBI RefSeq GCF_000425845.1-RS_2026_05_02 2026-05-02 2459 2368 66 na GCF_000425865.1 PRJNA224116 SAMN02440849 AUEG00000000.1 reference genome 1122143 515351 Lacticigenium naphthae DSM 19658 strain=DSM 19658 na latest Scaffold Major Full 2013-07-11 ASM42586v1 DOE Joint Genome Institute GCA_000425865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/865/GCF_000425865.1_ASM42586v1/ na assembly from type material na haploid bacteria 2134509 2130957 37.500000 0 32 37 NCBI RefSeq GCF_000425865.1-RS_2026_05_02 2026-05-02 2007 1951 32 na GCF_000425885.1 PRJNA224116 SAMN02440850 AUEH00000000.1 na 1122147 304207 Schleiferilactobacillus harbinensis DSM 16991 strain=DSM 16991 na latest Scaffold Major Full 2013-07-11 ASM42588v1 DOE Joint Genome Institute GCA_000425885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/885/GCF_000425885.1_ASM42588v1/ na assembly from type material na haploid bacteria 3134829 3134569 53.000000 0 101 104 NCBI RefSeq GCF_000425885.1-RS_2025_09_10 2025-09-10 3207 3038 84 na GCF_000425905.1 PRJNA224116 SAMN02440851 AUEI00000000.1 reference genome 1122152 116089 Lactobacillus psittaci DSM 15354 strain=DSM 15354 na latest Scaffold Major Full 2013-07-11 ASM42590v1 DOE Joint Genome Institute GCA_000425905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/905/GCF_000425905.1_ASM42590v1/ na assembly from type material na haploid bacteria 1542852 1539724 35.500000 0 23 26 NCBI RefSeq GCF_000425905.1-RS_2026_04_26 2026-04-26 1408 1327 63 na GCF_000425925.1 PRJNA224116 SAMN02440635 AUEJ00000000.1 na 1169195 168695 Salinispora tropica CNS416 strain=CNS416 na latest Scaffold Major Full 2013-07-11 ASM42592v1 DOE Joint Genome Institute GCA_000425925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/925/GCF_000425925.1_ASM42592v1/ na na na haploid bacteria 5181609 5179306 69.500000 0 97 104 NCBI RefSeq GCF_000425925.1-RS_2026_05_12 2026-05-12 4882 4601 65 na GCF_000425945.1 PRJNA224116 SAMN02440852 AUEK00000000.1 reference genome 1298857 1298857 Candidatus Solirubrobacter pratensis strain=URHD0082 na latest Scaffold Major Full 2013-07-11 ASM42594v1 DOE Joint Genome Institute GCA_000425945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/945/GCF_000425945.1_ASM42594v1/ na assembly from type material na haploid bacteria 6640086 6638666 72.500000 0 28 31 NCBI RefSeq GCF_000425945.1-RS_2025_12_09 2025-12-09 6552 6388 84 na GCF_000426045.1 PRJNA224116 SAMN02440636 AUEP00000000.1 na 1298863 1298863 Marmoricola sp. URHB0036 strain=URHB0036 na latest Scaffold Major Full 2013-07-11 ASM42604v1 DOE Joint Genome Institute GCA_000426045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/045/GCF_000426045.1_ASM42604v1/ na na na haploid bacteria 4829548 4829453 70.000000 0 22 23 NCBI RefSeq GCF_000426045.1-RS_2024_08_13 2024-08-13 4715 4624 55 na GCF_000426065.1 PRJNA224116 SAMN02440855 AUEQ00000000.1 na 1298864 1298864 Mycobacterium sp. URHD0025 strain=URHD0025 na latest Scaffold Major Full 2013-07-11 ASM42606v1 DOE Joint Genome Institute GCA_000426065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/065/GCF_000426065.1_ASM42606v1/ na na na haploid bacteria 6657122 6656962 66.500000 0 30 35 NCBI RefSeq GCF_000426065.1-RS_2024_07_01 2024-07-01 6384 6282 57 na GCF_000426165.1 PRJNA224116 SAMN02440637 AUEV00000000.1 na 1298880 1298880 Streptomyces sp. TAA486 strain=TAA486 na latest Scaffold Major Full 2013-07-11 ASM42616v1 DOE Joint Genome Institute GCA_000426165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/165/GCF_000426165.1_ASM42616v1/ na na na haploid bacteria 7069448 7067743 70.000000 0 36 39 NCBI RefSeq GCF_000426165.1-RS_2026_05_12 2026-05-12 6218 6009 75 na GCF_000426185.1 PRJNA224116 SAMN02440638 AUEW00000000.1 na 1302620 1302620 Cellulomonas sp. URHD0024 strain=URHD0024 na latest Scaffold Major Full 2013-07-11 ASM42618v1 DOE Joint Genome Institute GCA_000426185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/185/GCF_000426185.1_ASM42618v1/ na na na haploid bacteria 4467545 4467135 71.500000 0 23 26 NCBI RefSeq GCF_000426185.1-RS_2024_08_13 2024-08-13 4137 4055 54 na GCF_000426205.1 PRJNA224116 SAMN02440639 AUEX00000000.1 na 1276756 1276756 Acidovorax sp. JHL-9 strain=JHL-9 na latest Scaffold Major Full 2013-07-11 ASM42620v1 DOE Joint Genome Institute GCA_000426205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/205/GCF_000426205.1_ASM42620v1/ na na na haploid bacteria 4194664 4194534 65.000000 0 65 67 NCBI RefSeq GCF_000426205.1-RS_2024_08_13 2024-08-13 3997 3862 50 na GCF_000426225.1 PRJNA224116 SAMN02440640 AUEY00000000.1 reference genome 1304885 153026 Desulforegula conservatrix Mb1Pa strain=Mb1Pa na latest Scaffold Major Full 2013-07-11 ASM42622v1 DOE Joint Genome Institute GCA_000426225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/225/GCF_000426225.1_ASM42622v1/ na assembly from type material na haploid bacteria 4469042 4464516 42.500000 0 178 184 NCBI RefSeq GCF_000426225.1-RS_2025_12_13 2025-12-13 3957 3842 67 na GCF_000426245.1 PRJNA224116 SAMN02440842 AUEZ00000000.1 na 196490 196490 Bradyrhizobium sp. Ai1a-2 strain=Ai1a-2 na latest Scaffold Major Full 2013-07-11 ASM42624v1 DOE Joint Genome Institute GCA_000426245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/245/GCF_000426245.1_ASM42624v1/ na na na haploid bacteria 9029266 9027241 62.500000 0 246 250 NCBI RefSeq GCF_000426245.1-RS_2024_05_07 2024-05-07 8505 8077 91 26380037 GCF_000426265.1 PRJNA224116 SAMN02441187 AUFA00000000.1 na 443598 443598 Bradyrhizobium sp. Cp5.3 strain=Cp5.3 na latest Scaffold Major Full 2013-07-11 ASM42626v1 DOE Joint Genome Institute GCA_000426265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/265/GCF_000426265.1_ASM42626v1/ na na na haploid bacteria 8918781 8915986 63.500000 0 148 150 NCBI RefSeq GCF_000426265.1-RS_2024_08_22 2024-08-22 8544 8172 58 na GCF_000426285.1 PRJNA224116 SAMN02441532 AUFB00000000.1 reference genome 1041147 29450 Rhizobium leucaenae USDA 9039 strain=USDA 9039 na latest Scaffold Major Full 2013-07-11 ASM42628v1 DOE Joint Genome Institute GCA_000426285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/285/GCF_000426285.1_ASM42628v1/ na assembly from type material na haploid bacteria 6679728 6678268 59.500000 0 98 99 NCBI RefSeq GCF_000426285.1-RS_2026_04_29 2026-04-29 6520 6261 56 na GCF_000426305.1 PRJNA224116 SAMN02441533 AUFC00000000.1 reference genome 1120998 109327 Anaerovorax odorimutans DSM 5092 strain=DSM 5092 na latest Scaffold Major Full 2013-07-11 ASM42630v1 DOE Joint Genome Institute GCA_000426305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/305/GCF_000426305.1_ASM42630v1/ na assembly from type material na haploid bacteria 3263520 3262258 31.500000 0 54 57 NCBI RefSeq GCF_000426305.1-RS_2025_12_16 2025-12-16 3029 2948 53 na GCF_000426325.1 PRJNA224116 SAMN02441534 AUFD00000000.1 na 1305837 1305837 Streptomyces sp. CNS606 strain=CNS606 na latest Scaffold Major Full 2013-07-11 ASM42632v1 DOE Joint Genome Institute GCA_000426325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/325/GCF_000426325.1_ASM42632v1/ na na na haploid bacteria 5932917 5932251 73.000000 0 67 71 NCBI RefSeq GCF_000426325.1-RS_2026_05_12 2026-05-12 5229 5083 74 na GCF_000426345.1 PRJNA224116 SAMN02441535 AUFE00000000.1 na 388051 388051 Cupriavidus sp. amp6 strain=amp6 na latest Scaffold Major Full 2013-07-11 ASM42634v1 DOE Joint Genome Institute GCA_000426345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/345/GCF_000426345.1_ASM42634v1/ na na na haploid bacteria 7579563 7577493 65.500000 0 260 264 NCBI RefSeq GCF_000426345.1-RS_2024_08_13 2024-08-13 7172 6743 62 na GCF_000426365.1 PRJNA224116 SAMN02441520 AUFF00000000.1 reference genome 1121013 370776 Arenimonas composti TR7-09 = DSM 18010 strain=DSM 18010 na latest Scaffold Major Full 2013-07-11 ASM42636v1 DOE Joint Genome Institute GCA_000426365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/365/GCF_000426365.1_ASM42636v1/ na assembly from type material na haploid bacteria 3159341 3159316 71.000000 0 29 31 NCBI RefSeq GCF_000426365.1-RS_2026_05_05 2026-05-05 2914 2817 54 na GCF_000426385.1 PRJNA224116 SAMN02441521 AUFG00000000.1 reference genome 1121017 229480 Arsenicicoccus bolidensis DSM 15745 strain=DSM 15745 na latest Contig Major Full 2013-07-10 ASM42638v1 DOE Joint Genome Institute GCA_000426385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/385/GCF_000426385.1_ASM42638v1/ na assembly from type material na haploid bacteria 3995323 3995323 72.000000 0 86 86 NCBI RefSeq GCF_000426385.1-RS_2026_03_30 2026-03-30 3833 3711 62 na GCF_000426405.1 PRJNA224116 SAMN02440843 AUFH00000000.1 na 1121110 77635 Bifidobacterium subtile DSM 20096 strain=DSM 20096 na latest Contig Major Full 2013-07-10 ASM42640v1 DOE Joint Genome Institute GCA_000426405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/405/GCF_000426405.1_ASM42640v1/ na assembly from type material na haploid bacteria 2765266 2765266 61.000000 0 32 32 NCBI RefSeq GCF_000426405.1-RS_2026_05_16 2026-05-16 2333 2199 52 na GCF_000426425.1 PRJNA224116 SAMN02441522 AUFI00000000.1 reference genome 1121111 246618 Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 strain=DSM 15837 na latest Contig Major Full 2013-07-10 ASM42642v1 DOE Joint Genome Institute GCA_000426425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/425/GCF_000426425.1_ASM42642v1/ na assembly from type material na haploid bacteria 2223595 2223595 60.500000 0 14 14 NCBI RefSeq GCF_000426425.1-RS_2026_04_26 2026-04-26 1760 1659 54 na GCF_000426445.1 PRJNA224116 SAMN02440844 AUFJ00000000.1 reference genome 1121122 417948 Brevibacterium album DSM 18261 strain=DSM 18261 na latest Scaffold Major Full 2013-09-05 ASM42644v1 DOE Joint Genome Institute GCA_000426445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/445/GCF_000426445.1_ASM42644v1/ na assembly from type material na haploid bacteria 4094970 4092036 71.000000 0 15 16 NCBI RefSeq GCF_000426445.1-RS_2025_05_02 2025-05-02 3638 3539 70 na GCF_000426465.1 PRJNA224116 SAMN02441523 AUFK00000000.1 reference genome 1121285 365343 Epilithonimonas caeni DSM 17710 strain=DSM 17710 na latest Scaffold Major Full 2013-07-11 ASM42646v1 DOE Joint Genome Institute GCA_000426465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/465/GCF_000426465.1_ASM42646v1/ na assembly from type material na haploid bacteria 4118409 4115882 36.500000 0 17 21 NCBI RefSeq GCF_000426465.1-RS_2025_11_21 2025-11-21 3719 3653 55 na GCF_000426485.1 PRJNA224116 SAMN02441172 AUFL00000000.1 na 1121485 45254 Indolivaga capnocytophagoides DSM 22835 strain=DSM 22835 na latest Scaffold Major Full 2013-07-11 ASM42648v1 DOE Joint Genome Institute GCA_000426485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/485/GCF_000426485.1_ASM42648v1/ na assembly from type material na haploid bacteria 4377988 4376228 37.500000 0 38 41 NCBI RefSeq GCF_000426485.1-RS_2025_12_02 2025-12-02 3561 3460 59 na GCF_000426505.1 PRJNA224116 SAMN02441524 AUFM00000000.1 reference genome 1122607 390877 Nisaea denitrificans DSM 18348 strain=DSM 18348 na latest Scaffold Major Full 2013-07-11 ASM42650v1 DOE Joint Genome Institute GCA_000426505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/505/GCF_000426505.1_ASM42650v1/ na assembly from type material na haploid bacteria 4626718 4623999 60.500000 0 20 22 NCBI RefSeq GCF_000426505.1-RS_2026_05_02 2026-05-02 4327 4254 57 na GCF_000426525.1 PRJNA224116 SAMN02441173 AUFN00000000.1 reference genome 1122608 281714 Nocardioides alkalitolerans DSM 16699 strain=DSM 16699 na latest Scaffold Major Full 2013-07-11 ASM42652v1 DOE Joint Genome Institute GCA_000426525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/525/GCF_000426525.1_ASM42652v1/ na assembly from type material na haploid bacteria 4854484 4854127 73.000000 0 16 17 NCBI RefSeq GCF_000426525.1-RS_2026_05_02 2026-05-02 4659 4589 55 na GCF_000426545.1 PRJNA224116 SAMN02441525 AUFO00000000.1 na 1122922 225917 Paenibacillus massiliensis subsp. panacisoli DSM 21345 strain=DSM 21345 na latest Scaffold Major Full 2013-07-11 ASM42654v1 DOE Joint Genome Institute GCA_000426545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/545/GCF_000426545.1_ASM42654v1/ na assembly from type material na haploid bacteria 6326414 6319978 48.500000 0 43 56 NCBI RefSeq GCF_000426545.1-RS_2025_12_02 2025-12-02 5630 5451 105 na GCF_000426565.1 PRJNA224116 SAMN02440641 AUFP00000000.1 reference genome 1122978 77768 Segatella albensis DSM 11370 = JCM 12258 strain=DSM 11370 na latest Scaffold Major Full 2013-07-11 ASM42656v1 DOE Joint Genome Institute GCA_000426565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/565/GCF_000426565.1_ASM42656v1/ na assembly from type material na haploid bacteria 2668851 2666465 41.000000 0 44 49 NCBI RefSeq GCF_000426565.1-RS_2025_11_23 2025-11-23 2289 2190 56 na GCF_000426585.1 PRJNA224116 SAMN02440845 AUFQ00000000.1 reference genome 1122980 305719 Segatella baroniae DSM 16972 = JCM 13447 strain=DSM 16972 na latest Scaffold Major Full 2013-07-11 ASM42658v1 DOE Joint Genome Institute GCA_000426585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/585/GCF_000426585.1_ASM42658v1/ na assembly from type material na haploid bacteria 3128717 3128637 53.000000 0 47 48 NCBI RefSeq GCF_000426585.1-RS_2025_11_23 2025-11-23 2560 2446 58 na GCF_000426605.1 PRJNA224116 SAMN02441526 AUFR00000000.1 na 1122994 556499 Propionibacterium acidifaciens DSM 21887 strain=DSM 21887 na latest Scaffold Major Full 2013-07-11 ASM42660v1 DOE Joint Genome Institute GCA_000426605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/605/GCF_000426605.1_ASM42660v1/ na assembly from type material na haploid bacteria 3043901 3043421 70.500000 0 85 88 NCBI RefSeq GCF_000426605.1-RS_2026_01_15 2026-01-15 2688 2558 55 na GCF_000426625.1 PRJNA224116 SAMN02441527 AUFS00000000.1 reference genome 1123032 271091 Psychrilyobacter atlanticus DSM 19335 strain=DSM 19335 na latest Scaffold Major Full 2013-07-11 ASM42662v1 DOE Joint Genome Institute GCA_000426625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/625/GCF_000426625.1_ASM42662v1/ na assembly from type material na haploid bacteria 3539325 3530952 32.000000 0 3 5 NCBI RefSeq GCF_000426625.1-RS_2026_05_02 2026-05-02 3381 3274 92 na GCF_000426645.1 PRJNA224116 SAMN02440642 AUFT00000000.1 reference genome 1123241 459515 Nakamurella lactea DSM 19367 strain=DSM 19367 na latest Scaffold Major Full 2013-07-11 ASM42664v1 DOE Joint Genome Institute GCA_000426645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/645/GCF_000426645.1_ASM42664v1/ na assembly from type material na haploid bacteria 5820860 5819110 69.000000 0 27 32 NCBI RefSeq GCF_000426645.1-RS_2025_12_09 2025-12-09 5173 5058 65 na GCF_000426665.1 PRJNA224116 SAMN02440643 AUFU00000000.1 reference genome 1123249 671224 Centipeda artemidis DSM 19719 strain=DSM 19719 na latest Scaffold Major Full 2013-07-11 ASM42666v1 DOE Joint Genome Institute GCA_000426665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/665/GCF_000426665.1_ASM42666v1/ na assembly from type material na haploid bacteria 2350599 2350559 57.000000 0 35 36 NCBI RefSeq GCF_000426665.1-RS_2026_05_16 2026-05-16 2293 2206 63 na GCF_000426685.1 PRJNA224116 SAMN02440644 AUFV00000000.1 reference genome 1123257 415849 Solimonas flava DSM 18980 strain=DSM 18980 na latest Scaffold Major Full 2013-07-11 ASM42668v1 DOE Joint Genome Institute GCA_000426685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/685/GCF_000426685.1_ASM42668v1/ na assembly from type material na haploid bacteria 4460203 4457973 69.000000 0 27 30 NCBI RefSeq GCF_000426685.1-RS_2025_07_15 2025-07-15 4075 3981 53 na GCF_000426705.1 PRJNA224116 SAMN02441512 AUFW00000000.1 reference genome 1123275 504483 Spirochaeta cellobiosiphila DSM 17781 strain=DSM 17781 na latest Scaffold Major Full 2013-07-11 ASM42670v1 DOE Joint Genome Institute GCA_000426705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/705/GCF_000426705.1_ASM42670v1/ na assembly from type material na haploid bacteria 3949848 3945294 37.000000 0 29 38 NCBI RefSeq GCF_000426705.1-RS_2026_05_02 2026-05-02 3745 3654 57 na GCF_000426725.1 PRJNA224116 SAMN02441513 AUFX00000000.1 reference genome 926565 153721 Sporocytophaga myxococcoides DSM 11118 strain=DSM 11118 na latest Scaffold Major Full 2013-07-11 ASM42672v1 DOE Joint Genome Institute GCA_000426725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/725/GCF_000426725.1_ASM42672v1/ na assembly from type material na haploid bacteria 6344326 6341050 36.000000 0 21 25 NCBI RefSeq GCF_000426725.1-RS_2026_05_02 2026-05-02 5124 5054 55 na GCF_000426745.1 PRJNA224116 SAMN02440645 AUFY00000000.1 na 1123490 187328 Veillonella montpellierensis DSM 17217 strain=DSM 17217 na latest Scaffold Major Full 2013-07-11 ASM42674v1 DOE Joint Genome Institute GCA_000426745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/745/GCF_000426745.1_ASM42674v1/ na assembly from type material na haploid bacteria 1870913 1869942 37.000000 0 40 44 NCBI RefSeq GCF_000426745.1-RS_2026_04_26 2026-04-26 1665 1586 51 na GCF_000426765.1 PRJNA224116 SAMN02440646 AUFZ00000000.1 reference genome 1123493 335972 Vibrio litoralis DSM 17657 strain=DSM 17657 na latest Scaffold Major Full 2013-07-11 ASM42676v1 DOE Joint Genome Institute GCA_000426765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/765/GCF_000426765.1_ASM42676v1/ na assembly from type material na haploid bacteria 3823881 3823386 42.000000 0 20 24 NCBI RefSeq GCF_000426765.1-RS_2026_04_26 2026-04-26 3497 3377 76 na GCF_000426785.1 PRJNA224116 SAMN02441514 AUGA00000000.1 na 172088 172088 Bradyrhizobium sp. th-b2 strain=th.b2 na latest Scaffold Major Full 2013-07-11 ASM42678v1 DOE Joint Genome Institute GCA_000426785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/785/GCF_000426785.1_ASM42678v1/ na na na haploid bacteria 10118060 10114333 63.500000 0 266 275 NCBI RefSeq GCF_000426785.1-RS_2024_08_22 2024-08-22 9880 9343 73 na GCF_000426805.1 PRJNA224116 SAMN02441515 AUGB00000000.1 na 1070977 2426 Teredinibacter turnerae T8513 strain=T8513 na latest Scaffold Major Full 2013-07-11 ASM42680v1 DOE Joint Genome Institute GCA_000426805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/805/GCF_000426805.1_ASM42680v1/ na na na haploid bacteria 5268281 5264228 51.000000 0 84 93 NCBI RefSeq GCF_000426805.1-RS_2026_01_30 2026-01-30 4221 4132 48 na GCF_000426825.1 PRJNA224116 SAMN02440846 AUGC00000000.1 reference genome 1313301 55505 Thermonema rossianum DSM 10300 strain=DSM 10300 na latest Scaffold Major Full 2014-06-06 ASM42682v1 DOE Joint Genome Institute GCA_000426825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/825/GCF_000426825.1_ASM42682v1/ na assembly from type material na haploid bacteria 2954967 2953851 49.000000 0 24 26 NCBI RefSeq GCF_000426825.1-RS_2025_12_11 2025-12-11 2615 2559 51 na GCF_000426845.1 PRJNA224116 SAMN02440647 AUGD00000000.1 na 1304878 1304878 Bradyrhizobium sp. in8p8 strain=in8p8 na latest Scaffold Major Full 2013-07-11 ASM42684v1 DOE Joint Genome Institute GCA_000426845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/845/GCF_000426845.1_ASM42684v1/ na na na haploid bacteria 7589915 7589900 64.000000 0 52 53 NCBI RefSeq GCF_000426845.1-RS_2026_06_21 2026-06-21 7337 7118 51 na GCF_000426865.1 PRJNA224116 SAMN02441174 AUGE00000000.1 na 1304887 60035 Citrifermentans bremense R1 strain=R1 na latest Scaffold Major Full 2013-07-11 ASM42686v1 DOE Joint Genome Institute GCA_000426865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/865/GCF_000426865.1_ASM42686v1/ na na na haploid bacteria 4651027 4650902 60.500000 0 82 84 NCBI RefSeq GCF_000426865.1-RS_2025_12_02 2025-12-02 4225 4110 63 na GCF_000426885.1 PRJNA224116 SAMN02441175 AUGF00000000.1 na 1122244 90240 Moraxella caprae DSM 19149 strain=DSM 19149 na latest Scaffold Major Full 2013-07-11 ASM42688v1 DOE Joint Genome Institute GCA_000426885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/885/GCF_000426885.1_ASM42688v1/ na assembly from type material na haploid bacteria 2602231 2600132 44.500000 0 103 108 NCBI RefSeq GCF_000426885.1-RS_2025_12_23 2025-12-23 2626 2508 49 na GCF_000426905.1 PRJNA224116 SAMN02471998 APIY00000000.1 reference genome 398007 109265 Dolichospermum circinale AWQC131C strain=AWQC131C na latest Scaffold Major Full 2013-07-12 Dcir131C University of Western Sydney GCA_000426905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/905/GCF_000426905.1_Dcir131C/ na na na haploid bacteria 4445648 4407095 37.500000 0 121 472 NCBI RefSeq GCF_000426905.1-RS_2026_04_14 2026-04-14 4205 4027 47 na GCF_000426925.1 PRJNA224116 SAMN02471999 APIZ00000000.1 na 553470 109265 Dolichospermum circinale AWQC310F strain=AWQC310F na latest Scaffold Major Full 2013-07-12 Acir310F University of Western Sydney GCA_000426925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/426/925/GCF_000426925.1_Acir310F/ na na na haploid bacteria 4405846 4387110 37.500000 0 82 372 NCBI RefSeq GCF_000426925.1-RS_2026_02_08 2026-02-08 4274 4084 49 na GCF_000427035.1 PRJNA224116 SAMEA2272272 na na 1309806 1311 Streptococcus agalactiae 09mas018883 strain=09mas018883 na latest Complete Genome Major Full 2013-05-28 09mas018883 SLU-GBC GCA_000427035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/035/GCF_000427035.1_09mas018883/ na na na haploid bacteria 2138694 2138694 35.500000 1 1 1 NCBI RefSeq GCF_000427035.1-RS_2026_04_06 2026-04-06 2179 2012 105 23846269 GCF_000427075.1 PRJNA224116 SAMEA2272371 na na 1309807 1311 Streptococcus agalactiae ILRI005 strain=ILRI005 na latest Complete Genome Major Full 2013-05-28 ILRI005 SLU-GBC GCA_000427075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/075/GCF_000427075.1_ILRI005/ na na na haploid bacteria 2109759 2109759 35.500000 1 1 1 NCBI RefSeq GCF_000427075.1-RS_2025_04_18 2025-04-18 2191 1963 106 23868134 GCF_000427095.1 PRJNA224116 SAMEA2272150 na reference genome 1303518 454171 Chthonomonas calidirosea T49 strain=T49 na latest Chromosome Major Full 2013-06-04 T49 GNS GCA_000427095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/095/GCF_000427095.1_T49/ na assembly from type material na haploid bacteria 3437861 3427409 54.500000 1 1 7 NCBI RefSeq GCF_000427095.1-RS_2026_05_05 2026-05-05 2938 2859 54 na GCF_000427215.1 PRJNA224116 SAMN02603242 na na 754503 2099 Mesomycoplasma hyopneumoniae 7422 strain=7422 na latest Complete Genome Major Full 2013-07-15 ASM42721v1 Genesul GCA_000427215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/215/GCF_000427215.1_ASM42721v1/ na na na haploid bacteria 898495 898495 28.500000 1 1 1 NCBI RefSeq GCF_000427215.1-RS_2026_02_26 2026-02-26 733 671 36 23497205 GCF_000427235.1 PRJNA224116 SAMN02255022 AUOZ00000000.1 na 1354027 1421 Lysinibacillus sphaericus KCTC 3346 strain=KCTC 3346(T) na latest Contig Major Full 2013-07-15 KCTC3346_01 KRIBB GCA_000427235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/235/GCF_000427235.1_KCTC3346_01/ na assembly from type material na haploid bacteria 4560870 4560870 37.000000 0 83 83 NCBI RefSeq GCF_000427235.1-RS_2026_01_27 2026-01-27 4565 4411 101 23950128 GCF_000427255.1 PRJNA224116 SAMN02470703 ASZX00000000.1 na 1341692 84023 Clostridium autoethanogenum DSM 10061 strain=DSM 10061 na latest Contig Major Full 2013-07-15 ASM42725v1 North Carolina State University GCA_000427255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/255/GCF_000427255.1_ASM42725v1/ na assembly from type material na haploid bacteria 4323309 4323309 31.000000 0 100 100 NCBI RefSeq GCF_000427255.1-RS_2026_04_14 2026-04-14 4084 3949 74 23950130 GCF_000427275.1 PRJNA224116 SAMN02056363 na na 1311759 75985 Mannheimia haemolytica D171 strain=D171 na latest Complete Genome Major Full 2013-07-11 ASM42727v1 National Animal Disease Center GCA_000427275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/275/GCF_000427275.1_ASM42727v1/ na na na haploid bacteria 2501382 2501382 41.000000 1 1 1 NCBI RefSeq GCF_000427275.1-RS_2026_02_02 2026-02-02 2493 2299 84 25767233 GCF_000427295.1 PRJNA224116 SAMN02469438 ATNM00000000.1 na 641524 1350429 Cyclobacterium qasimii M12-11B strain=M12-11B na latest Contig Major Full 2013-07-15 CyQa1.0 Centre for Cellular and Molecular Biology GCA_000427295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/295/GCF_000427295.1_CyQa1.0/ na assembly from type material na haploid bacteria 6291928 6291928 39.000000 0 202 202 NCBI RefSeq GCF_000427295.1-RS_2025_08_04 2025-08-04 5217 4942 45 23950138 GCF_000427315.1 PRJNA224116 SAMN02471755 AUPJ00000000.1 na 494420 494420 Arthrobacter sp. TB 26 strain=TB 26 na latest Scaffold Major Full 2013-07-15 ArtTB261.0 University of Florence GCA_000427315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/315/GCF_000427315.1_ArtTB261.0/ na na na haploid bacteria 4324615 4323555 66.500000 0 556 662 NCBI RefSeq GCF_000427315.1-RS_2025_02_24 2025-02-24 4321 3853 72 24231161 GCF_000427335.1 PRJNA224116 SAMN02470013 ATMR00000000.1 reference genome 641526 1344585 Winogradskyella psychrotolerans RS-3 strain=RS-3 na latest Contig Major Full 2013-07-15 WiPs1.0 Centre for Cellular and Molecular Biology GCA_000427335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/335/GCF_000427335.1_WiPs1.0/ na assembly from type material na haploid bacteria 4337031 4337031 33.500000 0 219 219 NCBI RefSeq GCF_000427335.1-RS_2025_08_04 2025-08-04 4009 3708 48 23950132 GCF_000427365.1 PRJNA224116 SAMN02441234 ATXW00000000.1 reference genome 880526 28139 Rikenella microfusus DSM 15922 strain=DSM 15922 na latest Scaffold Major Full 2013-07-15 ASM42736v1 DOE Joint Genome Institute GCA_000427365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/365/GCF_000427365.1_ASM42736v1/ na assembly from type material na haploid bacteria 2880076 2879976 57.000000 0 2 3 NCBI RefSeq GCF_000427365.1-RS_2026_03_12 2026-03-12 2313 2240 58 na GCF_000427385.1 PRJNA224116 SAMN00120042 ATXX00000000.1 na 675524 73780 Methylocaldum szegediense O-12 strain=O12 na latest Scaffold Major Full 2013-09-05 ASM42738v1 JGI GCA_000427385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/385/GCF_000427385.1_ASM42738v1/ na na na haploid bacteria 5022295 5011695 57.000000 0 2 108 NCBI RefSeq GCF_000427385.1-RS_2026_01_27 2026-01-27 4591 4404 57 na GCF_000427405.1 PRJNA224116 SAMN00262208 ATXY00000000.1 reference genome 929703 103 Flectobacillus major DSM 103 strain=DSM 103 na latest Scaffold Major Full 2013-07-15 ASM42740v1 DOE Joint Genome Institute GCA_000427405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/405/GCF_000427405.1_ASM42740v1/ na assembly from type material na haploid bacteria 6221030 6220430 38.000000 0 7 13 NCBI RefSeq GCF_000427405.1-RS_2025_09_16 2025-09-16 4884 4808 61 na GCF_000427425.1 PRJNA224116 SAMN00203941 ATXZ00000000.1 reference genome 935948 44256 Caldanaerobius polysaccharolyticus DSM 13641 strain=DSM 13641 na latest Scaffold Major Full 2014-05-01 ASM42742v1 JGI GCA_000427425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/425/GCF_000427425.1_ASM42742v1/ na assembly from type material na haploid bacteria 2499862 2498562 42.000000 0 3 16 NCBI RefSeq GCF_000427425.1-RS_2025_12_09 2025-12-09 2518 2417 60 na GCF_000427445.1 PRJNA224116 SAMN02441570 ATYA00000000.1 reference genome 395964 133552 Methylocapsa acidiphila B2 strain=B2 na latest Scaffold Major Full 2013-07-15 ASM42744v1 Joint Genome Institute GCA_000427445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/445/GCF_000427445.1_ASM42744v1/ na assembly from type material na haploid bacteria 4103433 4103033 62.000000 0 2 6 NCBI RefSeq GCF_000427445.1-RS_2026_04_29 2026-04-29 3701 3545 58 na GCF_000427465.1 PRJNA224116 SAMN02440592 ATYB00000000.1 reference genome 935557 76745 Sinorhizobium arboris LMG 14919 strain=LMG 14919 na latest Scaffold Major Full 2013-07-15 ASM42746v1 JGI GCA_000427465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/465/GCF_000427465.1_ASM42746v1/ na assembly from type material na haploid bacteria 6850303 6849603 62.000000 0 7 14 NCBI RefSeq GCF_000427465.1-RS_2025_08_17 2025-08-17 6399 6137 66 na GCF_000427505.1 PRJNA224116 SAMN02440895 ATYD00000000.1 na 1076525 1076525 Rhodanobacter sp. OR444 strain=OR444 na latest Scaffold Major Full 2013-09-05 ASM42750v1 JGI GCA_000427505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/505/GCF_000427505.1_ASM42750v1/ na na na haploid bacteria 3996941 3981786 67.000000 0 105 311 NCBI RefSeq GCF_000427505.1-RS_2024_05_05 2024-05-05 3776 3577 54 na GCF_000427545.1 PRJNA224116 SAMN02441572 ATYF00000000.1 na 1076524 1076524 Rhodanobacter sp. OR92 strain=OR92 na latest Scaffold Major Full 2013-09-05 ASM42754v1 JGI GCA_000427545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/545/GCF_000427545.1_ASM42754v1/ na na na haploid bacteria 3943018 3939268 67.500000 0 23 29 NCBI RefSeq GCF_000427545.1-RS_2024_05_05 2024-05-05 3670 3575 57 na GCF_000427565.1 PRJNA224116 SAMN02440594 ATYG00000000.1 reference genome 1119529 54265 Carboxydothermus ferrireducens DSM 11255 strain=DSM 11255 na latest Scaffold Major Full 2013-07-15 ASM42756v1 JGI GCA_000427565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/565/GCF_000427565.1_ASM42756v1/ na assembly from type material na haploid bacteria 2441992 2441495 42.000000 0 49 53 NCBI RefSeq GCF_000427565.1-RS_2025_12_09 2025-12-09 2615 2516 58 na GCF_000427585.1 PRJNA224116 SAMN02440595 ATYH00000000.1 na 1041152 382 Sinorhizobium meliloti CIAM1775 strain=CIAM1775 na latest Scaffold Major Full 2013-07-15 ASM42758v1 JGI GCA_000427585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/585/GCF_000427585.1_ASM42758v1/ na na na haploid bacteria 6712855 6711724 62.000000 0 108 111 NCBI RefSeq GCF_000427585.1-RS_2026_01_15 2026-01-15 6502 6170 59 na GCF_000427605.1 PRJNA224116 SAMN02440596 ATYI00000000.1 na 1056818 2426 Teredinibacter turnerae T8415 strain=T8415 na latest Scaffold Major Full 2013-09-05 ASM42760v1 JGI GCA_000427605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/605/GCF_000427605.1_ASM42760v1/ na na na haploid bacteria 5158349 5156472 51.000000 0 50 56 NCBI RefSeq GCF_000427605.1-RS_2026_01_30 2026-01-30 4240 4156 47 na GCF_000427625.1 PRJNA224116 SAMN02441220 ATYJ00000000.1 reference genome 1095552 415 Methylobacter luteus IMV-B-3098 strain=IMV-B-3098 na latest Scaffold Major Full 2013-07-15 ASM42762v1 JGI GCA_000427625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/625/GCF_000427625.1_ASM42762v1/ na na na haploid bacteria 5029135 5027835 51.000000 0 4 17 NCBI RefSeq GCF_000427625.1-RS_2025_12_11 2025-12-11 4572 4423 62 na GCF_000427645.1 PRJNA224116 SAMN02441573 ATYK00000000.1 reference genome 1090319 257003 Sphingomonas phyllosphaerae FA2 strain=FA2 na latest Scaffold Major Full 2013-09-05 ASM42764v1 JGI GCA_000427645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/645/GCF_000427645.1_ASM42764v1/ na assembly from type material na haploid bacteria 3920299 3920099 67.000000 0 2 4 NCBI RefSeq GCF_000427645.1-RS_2026_03_21 2026-03-21 3650 3560 58 na GCF_000427665.1 PRJNA224116 SAMN02441221 ATYL00000000.1 reference genome 1089551 404900 Geminicoccus roseus DSM 18922 strain=DSM 18922 na latest Scaffold Major Full 2013-07-15 ASM42766v1 JGI GCA_000427665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/665/GCF_000427665.1_ASM42766v1/ na assembly from type material na haploid bacteria 5698370 5698270 68.500000 0 5 6 NCBI RefSeq GCF_000427665.1-RS_2025_12_09 2025-12-09 5257 5121 67 na GCF_000427685.1 PRJNA224116 SAMN02440896 ATYM00000000.1 reference genome 926690 376171 Haloplanus natans DSM 17983 strain=DSM 17983 na latest Scaffold Major Full 2013-07-15 ASM42768v1 JGI GCA_000427685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/685/GCF_000427685.1_ASM42768v1/ na assembly from type material na haploid archaea 3797935 3797735 65.000000 0 8 10 NCBI RefSeq GCF_000427685.1-RS_2025_11_21 2025-11-21 4017 3842 67 na GCF_000427705.1 PRJNA224116 SAMN02441574 ATYN00000000.1 na 1041144 384 Rhizobium leguminosarum bv. viciae UPM1137 strain=UPM1137 na latest Scaffold Major Full 2013-09-05 ASM42770v1 DOE Joint Genome Institute GCA_000427705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/705/GCF_000427705.1_ASM42770v1/ na na na haploid bacteria 7695351 7694001 60.500000 0 49 53 NCBI RefSeq GCF_000427705.1-RS_2025_08_17 2025-08-17 7512 7260 54 na GCF_000427725.1 PRJNA224116 SAMN02440597 ATYO00000000.1 na 1040986 1040986 Mesorhizobium sp. WSM3224 strain=WSM3224 na latest Scaffold Major Full 2013-07-15 ASM42772v1 DOE Joint Genome Institute GCA_000427725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/725/GCF_000427725.1_ASM42772v1/ na na na haploid bacteria 7096802 7096557 63.000000 0 72 74 NCBI RefSeq GCF_000427725.1-RS_2024_06_04 2024-06-04 6963 6717 62 na GCF_000427745.1 PRJNA224116 SAMN02441575 ATYP00000000.1 na 1041156 382 Sinorhizobium meliloti RRl128 strain=RRl128 na latest Scaffold Major Full 2013-09-05 ASM42774v1 DOE Joint Genome Institute GCA_000427745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/745/GCF_000427745.1_ASM42774v1/ na na na haploid bacteria 6900273 6898313 62.000000 0 156 157 NCBI RefSeq GCF_000427745.1-RS_2026_01_15 2026-01-15 6781 6409 65 na GCF_000427765.1 PRJNA224116 SAMN02441560 ATYQ00000000.1 na 1041145 384 Rhizobium leguminosarum bv. viciae VF39 strain=VF39 na latest Scaffold Major Full 2013-09-05 ASM42776v1 DOE Joint Genome Institute GCA_000427765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/765/GCF_000427765.1_ASM42776v1/ na na na haploid bacteria 7647401 7647351 61.000000 0 89 90 NCBI RefSeq GCF_000427765.1-RS_2025_06_11 2025-06-11 7514 7188 54 na GCF_000427785.1 PRJNA224116 SAMN02440881 ATYR00000000.1 reference genome 1111733 286638 Massilia alkalitolerans DSM 17462 strain=DSM 17462 na latest Scaffold Major Full 2013-07-15 ASM42778v1 DOE Joint Genome Institute GCA_000427785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/785/GCF_000427785.1_ASM42778v1/ na assembly from type material na haploid bacteria 6111684 6111314 65.500000 0 75 77 NCBI RefSeq GCF_000427785.1-RS_2025_08_26 2025-08-26 5565 5412 74 na GCF_000427805.1 PRJNA224116 SAMN02440598 ATYS00000000.1 na 1111728 82979 Budvicia aquatica DSM 5075 = ATCC 35567 strain=DSM 5075 na latest Scaffold Major Full 2013-09-05 ASM42780v1 DOE Joint Genome Institute GCA_000427805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/805/GCF_000427805.1_ASM42780v1/ na assembly from type material na haploid bacteria 5668731 5660097 46.000000 0 120 130 NCBI RefSeq GCF_000427805.1-RS_2026_05_16 2026-05-16 5125 4930 71 na GCF_000427825.1 PRJNA224116 SAMN02440599 ATYT00000000.1 reference genome 1111737 37926 Thermocrispum municipale DSM 44069 strain=DSM 44069 na latest Scaffold Major Full 2013-09-05 ASM42782v1 DOE Joint Genome Institute GCA_000427825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/825/GCF_000427825.1_ASM42782v1/ na assembly from type material na haploid bacteria 4526423 4526010 69.000000 0 27 30 NCBI RefSeq GCF_000427825.1-RS_2026_05_02 2026-05-02 4256 4147 56 na GCF_000427845.1 PRJNA224116 SAMN02441222 ATYU00000000.1 na 1111734 1748 Acidipropionibacterium acidipropionici DSM 4900 strain=DSM 4900 na latest Scaffold Major Full 2013-07-15 ASM42784v1 DOE Joint Genome Institute GCA_000427845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/845/GCF_000427845.1_ASM42784v1/ na assembly from type material na haploid bacteria 3589364 3588555 69.000000 0 52 56 NCBI RefSeq GCF_000427845.1-RS_2026_01_15 2026-01-15 3359 3220 61 na GCF_000427865.1 PRJNA224116 SAMN02441223 ATYV00000000.1 reference genome 1111729 489915 Corynebacterium sputi DSM 45148 strain=DSM 45148 na latest Scaffold Major Full 2013-07-15 ASM42786v1 DOE Joint Genome Institute GCA_000427865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/865/GCF_000427865.1_ASM42786v1/ na assembly from type material na haploid bacteria 2917684 2917394 61.500000 0 39 40 NCBI RefSeq GCF_000427865.1-RS_2026_03_30 2026-03-30 2821 2702 61 na GCF_000427885.1 PRJNA224116 SAMN02441561 ATYW00000000.1 reference genome 1111731 58116 Glycomyces tenuis DSM 44171 strain=DSM 44171 na latest Scaffold Major Full 2013-09-05 ASM42788v1 DOE Joint Genome Institute GCA_000427885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/885/GCF_000427885.1_ASM42788v1/ na assembly from type material na haploid bacteria 5735294 5733494 70.500000 0 44 47 NCBI RefSeq GCF_000427885.1-RS_2026_05_02 2026-05-02 5442 5272 60 na GCF_000427905.1 PRJNA224116 SAMN02441562 ATYX00000000.1 reference genome 1111738 37925 Thermocrispum agreste DSM 44070 strain=DSM 44070 na latest Scaffold Major Full 2013-07-15 ASM42790v1 DOE Joint Genome Institute GCA_000427905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/905/GCF_000427905.1_ASM42790v1/ na assembly from type material na haploid bacteria 4196086 4195841 70.000000 0 14 16 NCBI RefSeq GCF_000427905.1-RS_2026_05_02 2026-05-02 3831 3717 59 na GCF_000427925.1 PRJNA224116 SAMN02440600 ATYY00000000.1 na 796891 1079800 Rhizobium mesoamericanum STM6155 strain=STM6155 na latest Scaffold Major Full 2013-09-05 ASM42792v1 DOE Joint Genome Institute GCA_000427925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/925/GCF_000427925.1_ASM42792v1/ na na na haploid bacteria 6927906 6925986 59.000000 0 147 152 NCBI RefSeq GCF_000427925.1-RS_2026_01_30 2026-01-30 6801 6414 55 na GCF_000427945.1 PRJNA224116 SAMN02441563 ATYZ00000000.1 na 1041143 384 Rhizobium leguminosarum bv. viciae UPM1131 strain=UPM1131 na latest Scaffold Major Full 2013-07-15 ASM42794v1 DOE Joint Genome Institute GCA_000427945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/945/GCF_000427945.1_ASM42794v1/ na na na haploid bacteria 7231967 7230806 61.000000 0 41 44 NCBI RefSeq GCF_000427945.1-RS_2025_08_17 2025-08-17 6965 6708 53 na GCF_000427965.1 PRJNA224116 SAMN02440601 ATZA00000000.1 reference genome 1122621 376470 Olivibacter sitiensis DSM 17696 strain=DSM 17696 na latest Scaffold Major Full 2013-09-05 ASM42796v1 DOE Joint Genome Institute GCA_000427965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/965/GCF_000427965.1_ASM42796v1/ na assembly from type material na haploid bacteria 5053571 5051470 44.500000 0 110 112 NCBI RefSeq GCF_000427965.1-RS_2026_05_02 2026-05-02 4469 4368 58 na GCF_000427985.1 PRJNA224116 SAMN02441564 ATZB00000000.1 na 1041146 50338 Rhizobium sullae WSM1592 strain=WSM1592 na latest Scaffold Major Full 2013-07-15 ASM42798v1 DOE Joint Genome Institute GCA_000427985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/985/GCF_000427985.1_ASM42798v1/ na na na haploid bacteria 7530820 7530775 60.000000 0 118 119 NCBI RefSeq GCF_000427985.1-RS_2026_04_29 2026-04-29 7549 7069 56 na GCF_000428005.1 PRJNA224116 SAMN02440602 ATZC00000000.1 na 1041153 382 Sinorhizobium meliloti GVPV12 strain=GVPV12 na latest Scaffold Major Full 2013-07-15 ASM42800v1 DOE Joint Genome Institute GCA_000428005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/005/GCF_000428005.1_ASM42800v1/ na na na haploid bacteria 7076289 7075979 62.000000 0 106 107 NCBI RefSeq GCF_000428005.1-RS_2026_01_15 2026-01-15 6786 6464 60 na GCF_000428025.1 PRJNA224116 SAMN02440882 ATZD00000000.1 na 1041154 382 Sinorhizobium meliloti Mlalz-1 strain=Mlalz-1 na latest Scaffold Major Full 2013-07-15 ASM42802v1 DOE Joint Genome Institute GCA_000428025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/025/GCF_000428025.1_ASM42802v1/ na na na haploid bacteria 6664116 6663991 62.000000 0 99 100 NCBI RefSeq GCF_000428025.1-RS_2026_01_15 2026-01-15 6402 6076 58 na GCF_000428045.1 PRJNA224116 SAMN02440603 ATZE00000000.1 na 1111735 191960 Sedimenticola selenatireducens DSM 17993 strain=DSM 17993 na latest Scaffold Major Full 2013-09-05 ASM42804v1 DOE Joint Genome Institute GCA_000428045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/045/GCF_000428045.1_ASM42804v1/ na assembly from type material na haploid bacteria 4588530 4585449 56.500000 0 37 41 NCBI RefSeq GCF_000428045.1-RS_2026_03_03 2026-03-03 4313 4222 57 na GCF_000428065.1 PRJNA224116 SAMN02441224 ATZF00000000.1 reference genome 1123252 139808 Shimazuella kribbensis DSM 45090 strain=DSM 45090 na latest Scaffold Major Full 2013-09-05 ASM42806v1 DOE Joint Genome Institute GCA_000428065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/065/GCF_000428065.1_ASM42806v1/ na assembly from type material na haploid bacteria 4185101 4179157 38.500000 0 42 46 NCBI RefSeq GCF_000428065.1-RS_2026_05_02 2026-05-02 4320 4140 77 na GCF_000428085.1 PRJNA224116 SAMN02441565 ATZG00000000.1 na 1045004 336988 Oenococcus kitaharae DSM 17330 strain=DSM 17330 na latest Scaffold Major Full 2013-07-15 ASM42808v1 DOE Joint Genome Institute GCA_000428085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/085/GCF_000428085.1_ASM42808v1/ na assembly from type material na haploid bacteria 1843867 1838036 42.500000 0 5 7 NCBI RefSeq GCF_000428085.1-RS_2026_04_14 2026-04-14 1879 1802 54 na GCF_000428105.1 PRJNA224116 SAMN02441225 ATZH00000000.1 na 1121100 310300 Bacteroides pyogenes DSM 20611 = JCM 6294 strain=DSM 20611 na latest Scaffold Major Full 2013-09-05 ASM42810v1 DOE Joint Genome Institute GCA_000428105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/105/GCF_000428105.1_ASM42810v1/ na assembly from type material na haploid bacteria 3427038 3422915 45.500000 0 73 79 NCBI RefSeq GCF_000428105.1-RS_2026_05_16 2026-05-16 2877 2703 72 na GCF_000428125.1 PRJNA224116 SAMN02441226 ATZI00000000.1 na 1121097 477666 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain=DSM 19988 na latest Scaffold Major Full 2013-07-15 ASM42812v1 DOE Joint Genome Institute GCA_000428125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/125/GCF_000428125.1_ASM42812v1/ na assembly from type material na haploid bacteria 3633399 3631399 41.500000 0 32 34 NCBI RefSeq GCF_000428125.1-RS_2025_12_03 2025-12-03 3093 2943 66 na GCF_000428145.1 PRJNA224116 SAMN02441212 ATZJ00000000.1 reference genome 529086 1121276 Chitinilyticum litopenaei DSM 21440 strain=DSM 21440 na latest Scaffold Major Full 2013-07-15 ASM42814v1 DOE Joint Genome Institute GCA_000428145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/145/GCF_000428145.1_ASM42814v1/ na assembly from type material na haploid bacteria 3968450 3964900 62.500000 0 86 91 NCBI RefSeq GCF_000428145.1-RS_2025_09_02 2025-09-02 3726 3618 72 na GCF_000428465.1 PRJNA224116 SAMN02440887 ATZZ00000000.1 reference genome 1121278 356302 Chitinimonas koreensis DSM 17726 strain=DSM 17726 na latest Scaffold Major Full 2013-09-05 ASM42846v1 DOE Joint Genome Institute GCA_000428465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/465/GCF_000428465.1_ASM42846v1/ na assembly from type material na haploid bacteria 5586102 5574127 69.000000 0 39 54 NCBI RefSeq GCF_000428465.1-RS_2025_09_02 2025-09-02 4717 4628 62 na GCF_000428485.1 PRJNA224116 SAMN02440607 AUAA00000000.1 reference genome 1121870 191577 Epilithonimonas tenax DSM 16811 strain=DSM 16811 na latest Scaffold Major Full 2013-09-05 ASM42848v1 DOE Joint Genome Institute GCA_000428485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/485/GCF_000428485.1_ASM42848v1/ na assembly from type material na haploid bacteria 3625890 3624509 37.500000 0 105 109 NCBI RefSeq GCF_000428485.1-RS_2025_12_11 2025-12-11 3443 3339 45 na GCF_000428505.1 PRJNA224116 SAMN02441216 AUAB00000000.1 na 1121939 258591 Litchfieldella anticariensis FP35 = DSM 16096 strain=DSM 16096 na latest Scaffold Major Full 2013-07-15 ASM42850v1 DOE Joint Genome Institute GCA_000428505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/505/GCF_000428505.1_ASM42850v1/ na assembly from type material na haploid bacteria 5019539 5017289 58.500000 0 63 68 NCBI RefSeq GCF_000428505.1-RS_2025_09_28 2025-09-28 4729 4613 67 na GCF_000428525.1 PRJNA224116 SAMN02440888 AUAC00000000.1 reference genome 1121948 287478 Hellea balneolensis DSM 19091 strain=DSM 19091 na latest Scaffold Major Full 2013-07-15 ASM42852v1 DOE Joint Genome Institute GCA_000428525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/525/GCF_000428525.1_ASM42852v1/ na assembly from type material na haploid bacteria 3208823 3208438 48.500000 0 10 11 NCBI RefSeq GCF_000428525.1-RS_2025_12_09 2025-12-09 3063 3002 44 na GCF_000428565.1 PRJNA224116 SAMN02440889 AUAE00000000.1 na 1203610 574930 Parabacteroides gordonii MS-1 = DSM 23371 strain=DSM 23371 na latest Scaffold Major Full 2013-09-05 ASM42856v1 DOE Joint Genome Institute GCA_000428565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/565/GCF_000428565.1_ASM42856v1/ na assembly from type material na haploid bacteria 6677094 6673764 44.500000 0 54 62 NCBI RefSeq GCF_000428565.1-RS_2025_12_02 2025-12-02 5320 5174 76 na GCF_000428585.1 PRJNA224116 SAMN02441217 AUAF00000000.1 na 1123509 202772 Zooshikella ganghwensis DSM 15267 strain=DSM 15267 na latest Scaffold Major Full 2013-07-15 ASM42858v1 DOE Joint Genome Institute GCA_000428585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/585/GCF_000428585.1_ASM42858v1/ na assembly from type material na haploid bacteria 5798664 5798284 41.000000 0 414 416 NCBI RefSeq GCF_000428585.1-RS_2026_03_31 2026-03-31 5221 4992 69 na GCF_000428605.1 PRJNA224116 SAMN02441557 AUAG00000000.1 na 1266909 1266909 Thioalkalivibrio sp. ALE19 strain=ALE19 na latest Scaffold Major Full 2013-07-15 ASM42860v1 DOE Joint Genome Institute GCA_000428605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/605/GCF_000428605.1_ASM42860v1/ na na na haploid bacteria 3118282 3116250 67.000000 0 67 69 NCBI RefSeq GCF_000428605.1-RS_2024_08_13 2024-08-13 3084 2974 67 na GCF_000428645.1 PRJNA224116 SAMN02441218 AUAI00000000.1 na 1267002 2096 Mycoplasmoides gallisepticum ATCC 19610 strain=ATCC 19610 na latest Scaffold Major Full 2013-07-15 ASM42864v1 DOE Joint Genome Institute GCA_000428645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/645/GCF_000428645.1_ASM42864v1/ na assembly from type material na haploid bacteria 920684 919671 31.500000 0 32 33 NCBI RefSeq GCF_000428645.1-RS_2026_02_26 2026-02-26 788 697 44 na GCF_000428665.1 PRJNA224116 SAMN02441559 AUAJ00000000.1 na 1267006 2371 Xylella fastidiosa subsp. multiplex ATCC 35871 strain=ATCC 35871 na latest Scaffold Major Full 2013-07-15 ASM42866v1 DOE Joint Genome Institute GCA_000428665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/665/GCF_000428665.1_ASM42866v1/ na assembly from type material na haploid bacteria 2416255 2413091 51.500000 0 58 66 NCBI RefSeq GCF_000428665.1-RS_2026_05_14 2026-05-14 2169 2022 58 na GCF_000428685.1 PRJNA224116 SAMN02441219 AUAK00000000.1 na 1278298 52774 Actinomyces slackii ATCC 49928 strain=ATCC 49928 na latest Scaffold Major Full 2013-09-05 ASM42868v1 DOE Joint Genome Institute GCA_000428685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/685/GCF_000428685.1_ASM42868v1/ na assembly from type material na haploid bacteria 3171092 3164567 70.000000 0 46 61 NCBI RefSeq GCF_000428685.1-RS_2026_05_16 2026-05-16 2663 2572 59 na GCF_000428705.1 PRJNA224116 SAMN02441544 AUAL00000000.1 na 1278311 29552 Haploplasma axanthum ATCC 25176 strain=ATCC 25176 na latest Scaffold Major Full 2013-09-05 ASM42870v1 DOE Joint Genome Institute GCA_000428705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/705/GCF_000428705.1_ASM42870v1/ na assembly from type material na haploid bacteria 1807123 1805204 28.000000 0 57 61 NCBI RefSeq GCF_000428705.1-RS_2026_02_15 2026-02-15 1714 1648 45 na GCF_000428725.1 PRJNA224116 SAMN02441204 AUAM00000000.1 reference genome 1278312 444919 Psychromonas aquimarina ATCC BAA-1526 strain=ATCC BAA-1526 na latest Scaffold Major Full 2013-07-15 ASM42872v1 DOE Joint Genome Institute GCA_000428725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/725/GCF_000428725.1_ASM42872v1/ na assembly from type material na haploid bacteria 5534630 5532103 42.500000 0 141 145 NCBI RefSeq GCF_000428725.1-RS_2026_05_02 2026-05-02 4845 4695 70 na GCF_000428745.1 PRJNA224116 SAMN02441545 AUAN00000000.1 na 1123489 464322 Veillonella magna DSM 19857 strain=DSM 19857 na latest Scaffold Major Full 2013-09-05 ASM42874v1 DOE Joint Genome Institute GCA_000428745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/745/GCF_000428745.1_ASM42874v1/ na assembly from type material na haploid bacteria 2203313 2202818 44.500000 0 34 37 NCBI RefSeq GCF_000428745.1-RS_2026_03_31 2026-03-31 2050 1967 62 na GCF_000428765.1 PRJNA224116 SAMN02440608 AUAO00000000.1 reference genome 1121123 370977 Brevundimonas aveniformis DSM 17977 strain=DSM 17977 na latest Scaffold Major Full 2013-07-15 ASM42876v1 DOE Joint Genome Institute GCA_000428765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/765/GCF_000428765.1_ASM42876v1/ na assembly from type material na haploid bacteria 2579573 2577573 65.000000 0 6 7 NCBI RefSeq GCF_000428765.1-RS_2025_05_02 2025-05-02 2628 2571 50 na GCF_000428785.1 PRJNA224116 SAMN02441546 AUAP00000000.1 na 1121351 211502 Conchiformibius kuhniae DSM 17694 strain=DSM 17694 na latest Scaffold Major Full 2013-07-15 ASM42878v1 DOE Joint Genome Institute GCA_000428785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/785/GCF_000428785.1_ASM42878v1/ na assembly from type material na haploid bacteria 2118625 2113141 56.000000 0 50 56 NCBI RefSeq GCF_000428785.1-RS_2026_05_02 2026-05-02 2123 2027 69 na GCF_000428805.1 PRJNA224116 SAMN02441205 AUAQ00000000.1 na 1121360 556548 Corynebacterium freiburgense DSM 45254 strain=DSM 45254 na latest Scaffold Major Full 2013-07-15 ASM42880v1 DOE Joint Genome Institute GCA_000428805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/805/GCF_000428805.1_ASM42880v1/ na assembly from type material na haploid bacteria 2910197 2908666 50.000000 0 19 21 NCBI RefSeq GCF_000428805.1-RS_2026_03_30 2026-03-30 2648 2562 64 na GCF_000428825.1 PRJNA224116 SAMN02440873 AUAR00000000.1 reference genome 1121411 29503 Desulfomicrobium escambiense DSM 10707 strain=DSM 10707 na latest Scaffold Major Full 2013-09-05 ASM42882v1 DOE Joint Genome Institute GCA_000428825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/825/GCF_000428825.1_ASM42882v1/ na assembly from type material na haploid bacteria 3782107 3779471 63.500000 0 38 41 NCBI RefSeq GCF_000428825.1-RS_2026_05_02 2026-05-02 3456 3354 73 na GCF_000428845.1 PRJNA224116 SAMN02440874 AUAS00000000.1 reference genome 1121481 492736 Dyadobacter alkalitolerans DSM 23607 strain=DSM 23607 na latest Scaffold Major Full 2013-07-15 ASM42884v1 DOE Joint Genome Institute GCA_000428845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/845/GCF_000428845.1_ASM42884v1/ na assembly from type material na haploid bacteria 6287614 6285169 45.500000 0 50 51 NCBI RefSeq GCF_000428845.1-RS_2025_09_16 2025-09-16 5465 5381 45 na GCF_000428865.1 PRJNA224116 SAMN02440875 AUAT00000000.1 na 1121871 88132 Eremococcus coleocola DSM 15696 strain=DSM 15696 na latest Scaffold Major Full 2013-09-05 ASM42886v1 DOE Joint Genome Institute GCA_000428865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/865/GCF_000428865.1_ASM42886v1/ na assembly from type material na haploid bacteria 1869643 1867993 39.000000 0 48 52 NCBI RefSeq GCF_000428865.1-RS_2026_05_16 2026-05-16 1926 1838 41 na GCF_000428885.1 PRJNA224116 SAMN02441206 AUAU00000000.1 reference genome 1121920 44676 Geothrix fermentans DSM 14018 strain=DSM 14018 na latest Scaffold Major Full 2013-07-15 ASM42888v1 DOE Joint Genome Institute GCA_000428885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/885/GCF_000428885.1_ASM42888v1/ na assembly from type material na haploid bacteria 3289813 3287888 69.000000 0 36 42 NCBI RefSeq GCF_000428885.1-RS_2026_05_02 2026-05-02 3012 2931 64 na GCF_000428905.1 PRJNA224116 SAMN02440876 AUAV00000000.1 reference genome 1121922 56807 Brumicola pallidula DSM 14239 = ACAM 615 strain=DSM 14239 na latest Scaffold Major Full 2013-09-05 ASM42890v1 DOE Joint Genome Institute GCA_000428905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/905/GCF_000428905.1_ASM42890v1/ na assembly from type material na haploid bacteria 4363047 4359556 41.000000 0 29 35 NCBI RefSeq GCF_000428905.1-RS_2026_04_26 2026-04-26 3869 3722 59 na GCF_000428925.1 PRJNA224116 SAMN02441207 AUAW00000000.1 na 1114972 231049 Furfurilactobacillus rossiae DSM 15814 strain=DSM 15814 na latest Scaffold Major Full 2013-07-15 ASM42892v1 DOE Joint Genome Institute GCA_000428925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/925/GCF_000428925.1_ASM42892v1/ na assembly from type material na haploid bacteria 2862294 2861815 43.500000 0 39 41 NCBI RefSeq GCF_000428925.1-RS_2025_12_04 2025-12-04 2772 2656 74 na GCF_000428945.1 PRJNA224116 SAMN02440609 AUAX00000000.1 reference genome 1121946 53368 Hamadaea tsunoensis DSM 44101 strain=DSM 44101 na latest Scaffold Major Full 2013-07-15 ASM42894v1 DOE Joint Genome Institute GCA_000428945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/945/GCF_000428945.1_ASM42894v1/ na assembly from type material na haploid bacteria 9478888 9478078 71.000000 0 69 73 NCBI RefSeq GCF_000428945.1-RS_2025_12_09 2025-12-09 8437 8256 75 na GCF_000428965.1 PRJNA224116 SAMN02440610 AUAY00000000.1 na 1122171 157688 Leptotrichia hofstadii DSM 21651 strain=DSM 21651 na latest Scaffold Major Full 2013-09-05 ASM42896v1 DOE Joint Genome Institute GCA_000428965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/965/GCF_000428965.1_ASM42896v1/ na assembly from type material na haploid bacteria 2560738 2553025 30.500000 0 18 23 NCBI RefSeq GCF_000428965.1-RS_2026_05_16 2026-05-16 2479 2408 52 na GCF_000428985.1 PRJNA224116 SAMN02440877 AUAZ00000000.1 reference genome 1122201 404770 Marinobacterium litorale DSM 23545 strain=DSM 23545 na latest Scaffold Major Full 2013-07-15 ASM42898v1 DOE Joint Genome Institute GCA_000428985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/428/985/GCF_000428985.1_ASM42898v1/ na assembly from type material na haploid bacteria 4380400 4378162 56.500000 0 64 69 NCBI RefSeq GCF_000428985.1-RS_2026_05_02 2026-05-02 4257 4144 73 na GCF_000429005.1 PRJNA224116 SAMN02440878 AUBA00000000.1 reference genome 1122612 505248 Novosphingobium acidiphilum DSM 19966 strain=DSM 19966 na latest Scaffold Major Full 2013-07-15 ASM42900v1 DOE Joint Genome Institute GCA_000429005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/005/GCF_000429005.1_ASM42900v1/ na assembly from type material na haploid bacteria 3709060 3708535 64.500000 0 54 55 NCBI RefSeq GCF_000429005.1-RS_2026_05_02 2026-05-02 3476 3399 52 na GCF_000429025.1 PRJNA224116 SAMN02441208 AUBB00000000.1 reference genome 1123025 103441 Actinospineispora spinosispora DSM 44797 strain=DSM 44797 na latest Scaffold Major Full 2013-09-05 ASM42902v1 DOE Joint Genome Institute GCA_000429025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/025/GCF_000429025.1_ASM42902v1/ na assembly from type material na haploid bacteria 9537556 9532942 69.500000 0 73 88 NCBI RefSeq GCF_000429025.1-RS_2026_05_02 2026-05-02 8680 8523 82 na GCF_000429045.1 PRJNA224116 SAMN02441547 AUBC00000000.1 reference genome 1123229 552063 Salinarimonas rosea DSM 21201 strain=DSM 21201 na latest Scaffold Major Full 2013-07-15 ASM42904v1 DOE Joint Genome Institute GCA_000429045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/045/GCF_000429045.1_ASM42904v1/ na assembly from type material na haploid bacteria 5245321 5244746 72.000000 0 56 62 NCBI RefSeq GCF_000429045.1-RS_2026_04_29 2026-04-29 4964 4868 53 na GCF_000429065.1 PRJNA224116 SAMN02441209 AUBD00000000.1 reference genome 1123253 265429 Silanimonas lenta DSM 16282 strain=DSM 16282 na latest Scaffold Major Full 2013-07-15 ASM42906v1 DOE Joint Genome Institute GCA_000429065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/065/GCF_000429065.1_ASM42906v1/ na assembly from type material na haploid bacteria 2647044 2644563 71.000000 0 21 24 NCBI RefSeq GCF_000429065.1-RS_2026_05_02 2026-05-02 2470 2381 63 na GCF_000429085.1 PRJNA224116 SAMN02440879 AUBE00000000.1 reference genome 1123319 67298 Streptomyces flavidovirens DSM 40150 strain=DSM 40150 na latest Scaffold Major Full 2013-07-15 ASM42908v1 DOE Joint Genome Institute GCA_000429085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/085/GCF_000429085.1_ASM42908v1/ na assembly from type material na haploid bacteria 7070406 7070121 70.500000 0 49 53 NCBI RefSeq GCF_000429085.1-RS_2026_04_23 2026-04-23 6537 6226 74 na GCF_000429105.1 PRJNA224116 SAMN02440611 AUBF00000000.1 reference genome 1120946 121163 Schaalia suimastitidis DSM 15538 strain=DSM 15538 na latest Scaffold Major Full 2013-09-05 ASM42910v1 DOE Joint Genome Institute GCA_000429105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/105/GCF_000429105.1_ASM42910v1/ na assembly from type material na haploid bacteria 2294128 2292353 56.500000 0 11 14 NCBI RefSeq GCF_000429105.1-RS_2026_03_30 2026-03-30 1967 1898 58 na GCF_000429125.1 PRJNA224116 SAMN02440880 AUBG00000000.1 reference genome 1120951 487317 Aequorivita capsosiphonis DSM 23843 strain=DSM 23843 na latest Scaffold Major Full 2013-09-05 ASM42912v1 DOE Joint Genome Institute GCA_000429125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/125/GCF_000429125.1_ASM42912v1/ na assembly from type material na haploid bacteria 4042904 4039197 37.000000 0 26 32 NCBI RefSeq GCF_000429125.1-RS_2025_05_02 2025-05-02 3648 3572 45 na GCF_000429145.1 PRJNA224116 SAMN02441210 AUBH00000000.1 reference genome 1120953 226010 Aestuariibacter salexigens DSM 15300 strain=DSM 15300 na latest Scaffold Major Full 2013-09-05 ASM42914v1 DOE Joint Genome Institute GCA_000429145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/145/GCF_000429145.1_ASM42914v1/ na assembly from type material na haploid bacteria 3783840 3782675 48.500000 0 22 23 NCBI RefSeq GCF_000429145.1-RS_2026_03_30 2026-03-30 3462 3388 60 na GCF_000429165.1 PRJNA224116 SAMN02441211 AUBI00000000.1 na 1120919 285268 Acetobacter nitrogenifigens DSM 23921 = NBRC 105050 strain=DSM 23921 na latest Scaffold Major Full 2013-07-15 ASM42916v1 DOE Joint Genome Institute GCA_000429165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/165/GCF_000429165.1_ASM42916v1/ na assembly from type material na haploid bacteria 4270516 4270281 60.500000 0 51 53 NCBI RefSeq GCF_000429165.1-RS_2025_12_15 2025-12-15 3874 3734 57 na GCF_000429185.2 PRJNA224116 SAMN02441196 AUBJ00000000.2 na 1120930 2893586 Actinoalloteichus caeruleus DSM 43889 strain=DSM 43889 na latest Contig Major Full 2022-07-06 ASM42918v2 DOE Joint Genome Institute GCA_000429185.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/185/GCF_000429185.2_ASM42918v2/ na assembly from heterotypic synonym type material na haploid bacteria 6039370 6039370 72.500000 0 1 1 NCBI RefSeq GCF_000429185.2-RS_2025_08_29 2025-08-29 4976 4790 62 na GCF_000429205.1 PRJNA224116 SAMN02441197 AUBK00000000.1 na 1120932 59505 Actinotignum schaalii DSM 15541 strain=DSM 15541 na latest Scaffold Major Full 2013-07-15 ASM42920v1 DOE Joint Genome Institute GCA_000429205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/205/GCF_000429205.1_ASM42920v1/ na assembly from type material na haploid bacteria 2130987 2129678 62.500000 0 27 29 NCBI RefSeq GCF_000429205.1-RS_2025_12_23 2025-12-23 1822 1744 56 na GCF_000429225.1 PRJNA224116 SAMN02440612 AUBL00000000.1 reference genome 1120941 272548 Actinomyces dentalis DSM 19115 strain=DSM 19115 na latest Scaffold Major Full 2013-07-15 ASM42922v1 DOE Joint Genome Institute GCA_000429225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/225/GCF_000429225.1_ASM42922v1/ na assembly from type material na haploid bacteria 3531393 3529622 73.000000 0 91 100 NCBI RefSeq GCF_000429225.1-RS_2025_05_02 2025-05-02 2957 2815 60 na GCF_000429245.1 PRJNA224116 SAMN02441198 AUBM00000000.1 reference genome 1120942 52768 Schaalia georgiae DSM 6843 strain=DSM 6843 na latest Scaffold Major Full 2013-07-15 ASM42924v1 DOE Joint Genome Institute GCA_000429245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/245/GCF_000429245.1_ASM42924v1/ na assembly from type material na haploid bacteria 2498023 2492993 70.000000 0 23 30 NCBI RefSeq GCF_000429245.1-RS_2026_04_16 2026-04-16 2150 2054 60 na GCF_000429265.1 PRJNA224116 SAMN02441199 AUBN00000000.1 reference genome 1120943 52769 Actinomyces gerencseriae DSM 6844 strain=DSM 6844 na latest Scaffold Major Full 2013-09-05 ASM42926v1 DOE Joint Genome Institute GCA_000429265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/265/GCF_000429265.1_ASM42926v1/ na assembly from type material na haploid bacteria 3420019 3418708 70.500000 0 28 31 NCBI RefSeq GCF_000429265.1-RS_2026_05_02 2026-05-02 2880 2763 60 na GCF_000429285.1 PRJNA224116 SAMN02440613 AUBO00000000.1 na 1121448 879 Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 strain=DSM 1382 na latest Scaffold Major Full 2013-07-15 ASM42928v1 DOE Joint Genome Institute GCA_000429285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/285/GCF_000429285.1_ASM42928v1/ na assembly from type material na haploid bacteria 3788225 3784678 63.500000 0 84 89 NCBI RefSeq GCF_000429285.1-RS_2026_01_23 2026-01-23 3426 3334 71 na GCF_000429305.1 PRJNA224116 SAMN02441548 AUBP00000000.1 reference genome 1121453 102109 Desulfovibrio inopinatus DSM 10711 strain=DSM 10711 na latest Scaffold Major Full 2013-09-05 ASM42930v1 DOE Joint Genome Institute GCA_000429305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/305/GCF_000429305.1_ASM42930v1/ na assembly from type material na haploid bacteria 5767550 5759618 49.000000 0 69 80 NCBI RefSeq GCF_000429305.1-RS_2026_05_02 2026-05-02 4975 4847 72 na GCF_000429325.1 PRJNA224116 SAMN02441200 AUBQ00000000.1 reference genome 1121462 270496 Fundidesulfovibrio putealis DSM 16056 strain=DSM 16056 na latest Scaffold Major Full 2013-07-15 ASM42932v1 DOE Joint Genome Institute GCA_000429325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/325/GCF_000429325.1_ASM42932v1/ na assembly from type material na haploid bacteria 4705742 4703269 63.000000 0 29 35 NCBI RefSeq GCF_000429325.1-RS_2025_12_09 2025-12-09 4301 4208 69 na GCF_000429345.1 PRJNA224116 SAMN02440614 AUBR00000000.1 reference genome 1121468 348842 Desulfovirgula thermocuniculi DSM 16036 strain=DSM 16036 na latest Scaffold Major Full 2013-09-05 ASM42934v1 DOE Joint Genome Institute GCA_000429345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/345/GCF_000429345.1_ASM42934v1/ na assembly from type material na haploid bacteria 3060447 3054361 61.500000 0 131 138 NCBI RefSeq GCF_000429345.1-RS_2026_05_02 2026-05-02 3354 3209 73 na GCF_000429365.1 PRJNA224116 SAMN02440615 AUBS00000000.1 reference genome 1121479 337702 Pseudodonghicola xiamenensis DSM 18339 strain=DSM 18339 na latest Scaffold Major Full 2013-09-05 ASM42936v1 DOE Joint Genome Institute GCA_000429365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/365/GCF_000429365.1_ASM42936v1/ na assembly from type material na haploid bacteria 4728486 4726936 63.500000 0 87 93 NCBI RefSeq GCF_000429365.1-RS_2025_12_10 2025-12-10 4549 4404 59 na GCF_000429385.1 PRJNA224116 SAMN02441201 AUBT00000000.1 na 1120962 232846 Alcaligenes phenolicus DSM 16503 strain=DSM 16503 na latest Scaffold Major Full 2013-09-05 ASM42938v1 DOE Joint Genome Institute GCA_000429385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/385/GCF_000429385.1_ASM42938v1/ na assembly from type material na haploid bacteria 4248310 4247680 56.500000 0 27 29 NCBI RefSeq GCF_000429385.1-RS_2025_07_17 2025-07-17 3932 3842 55 na GCF_000429405.1 PRJNA224116 SAMN02440616 AUBU00000000.1 reference genome 1120966 264027 Algoriphagus marincola DSM 16067 strain=DSM 16067 na latest Scaffold Major Full 2013-09-05 ASM42940v1 DOE Joint Genome Institute GCA_000429405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/405/GCF_000429405.1_ASM42940v1/ na assembly from type material na haploid bacteria 4431678 4427228 42.000000 0 27 35 NCBI RefSeq GCF_000429405.1-RS_2025_12_10 2025-12-10 3919 3848 48 na GCF_000429425.1 PRJNA224116 SAMN02441202 AUBV00000000.1 reference genome 1120965 226504 Algoriphagus mannitolivorans DSM 15301 strain=DSM 15301 na latest Scaffold Major Full 2013-07-15 ASM42942v1 DOE Joint Genome Institute GCA_000429425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/425/GCF_000429425.1_ASM42942v1/ na assembly from type material na haploid bacteria 4152949 4152414 42.500000 0 22 24 NCBI RefSeq GCF_000429425.1-RS_2025_12_09 2025-12-09 3640 3578 49 na GCF_000429445.1 PRJNA224116 SAMN02440865 AUBW00000000.1 reference genome 1120967 344884 Algoriphagus terrigena DSM 22685 strain=DSM 22685 na latest Scaffold Major Full 2013-07-15 ASM42944v1 DOE Joint Genome Institute GCA_000429445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/445/GCF_000429445.1_ASM42944v1/ na assembly from type material na haploid bacteria 5783376 5781215 48.000000 0 58 60 NCBI RefSeq GCF_000429445.1-RS_2025_05_02 2025-05-02 4907 4832 50 na GCF_000429465.1 PRJNA224116 SAMN02441203 AUBX00000000.1 reference genome 1120968 426371 Algoriphagus vanfongensis DSM 17529 strain=DSM 17529 na latest Scaffold Major Full 2013-07-15 ASM42946v1 DOE Joint Genome Institute GCA_000429465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/465/GCF_000429465.1_ASM42946v1/ na assembly from type material na haploid bacteria 4712065 4711845 43.000000 0 17 18 NCBI RefSeq GCF_000429465.1-RS_2026_05_02 2026-05-02 4027 3969 48 na GCF_000429485.1 PRJNA224116 SAMN02440617 AUBY00000000.1 reference genome 1120969 561965 Aliagarivorans marinus DSM 23064 strain=DSM 23064 na latest Scaffold Major Full 2013-07-15 ASM42948v1 DOE Joint Genome Institute GCA_000429485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/485/GCF_000429485.1_ASM42948v1/ na assembly from type material na haploid bacteria 4878345 4876455 53.500000 0 42 49 NCBI RefSeq GCF_000429485.1-RS_2026_05_02 2026-05-02 4470 4359 89 na GCF_000429505.1 PRJNA224116 SAMN02440618 AUBZ00000000.1 reference genome 1120970 561966 Aliagarivorans taiwanensis DSM 22990 strain=DSM 22990 na latest Scaffold Major Full 2013-07-15 ASM42950v1 DOE Joint Genome Institute GCA_000429505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/505/GCF_000429505.1_ASM42950v1/ na assembly from type material na haploid bacteria 4413269 4411909 53.500000 0 80 83 NCBI RefSeq GCF_000429505.1-RS_2025_05_02 2025-05-02 4151 4014 76 na GCF_000429525.1 PRJNA224116 SAMN02440619 AUCA00000000.1 reference genome 1120971 392016 Alicyclobacillus contaminans DSM 17975 strain=DSM 17975 na latest Scaffold Major Full 2013-07-15 ASM42952v1 DOE Joint Genome Institute GCA_000429525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/525/GCF_000429525.1_ASM42952v1/ na assembly from type material na haploid bacteria 3272318 3271232 58.000000 0 111 112 NCBI RefSeq GCF_000429525.1-RS_2025_05_02 2025-05-02 3445 3283 91 na GCF_000429545.1 PRJNA224116 SAMN02440866 AUCB00000000.1 reference genome 1121011 228955 Arenibacter certesii DSM 19833 strain=DSM 19833 na latest Scaffold Major Full 2013-07-15 ASM42954v1 DOE Joint Genome Institute GCA_000429545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/545/GCF_000429545.1_ASM42954v1/ na assembly from type material na haploid bacteria 4989751 4983006 37.500000 0 83 87 NCBI RefSeq GCF_000429545.1-RS_2025_11_21 2025-11-21 4096 4000 45 na GCF_000429565.1 PRJNA224116 SAMN02440620 AUCC00000000.1 na 1121018 638 Arsenophonus nasoniae DSM 15247 strain=DSM 15247 na latest Scaffold Major Full 2013-09-05 ASM42956v1 DOE Joint Genome Institute GCA_000429565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/565/GCF_000429565.1_ASM42956v1/ na assembly from type material na haploid bacteria 3670548 3665838 37.500000 0 296 309 NCBI RefSeq GCF_000429565.1-RS_2026_03_31 2026-03-31 3767 3447 69 na GCF_000429585.1 PRJNA224116 SAMN02441188 AUCD00000000.1 reference genome 1121024 269774 Atopococcus tabaci DSM 17538 strain=DSM 17538 na latest Scaffold Major Full 2013-09-05 ASM42958v1 DOE Joint Genome Institute GCA_000429585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/585/GCF_000429585.1_ASM42958v1/ na assembly from type material na haploid bacteria 2267201 2264921 45.500000 0 139 142 NCBI RefSeq GCF_000429585.1-RS_2026_03_30 2026-03-30 2383 2234 47 na GCF_000429605.1 PRJNA224116 SAMN02441189 AUCE00000000.1 na 1121032 418702 Azonexus hydrophilus DSM 23864 strain=DSM 23864 na latest Scaffold Major Full 2013-07-15 ASM42960v1 DOE Joint Genome Institute GCA_000429605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/605/GCF_000429605.1_ASM42960v1/ na assembly from type material na haploid bacteria 3341181 3338768 63.000000 0 16 19 NCBI RefSeq GCF_000429605.1-RS_2026_05_02 2026-05-02 3252 3173 68 na GCF_000429625.1 PRJNA224116 SAMN02440867 AUCF00000000.1 reference genome 1121033 34010 Azospirillum halopraeferens DSM 3675 strain=DSM 3675 na latest Scaffold Major Full 2013-09-05 ASM42962v1 DOE Joint Genome Institute GCA_000429625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/625/GCF_000429625.1_ASM42962v1/ na assembly from type material na haploid bacteria 6512377 6508482 70.500000 0 50 56 NCBI RefSeq GCF_000429625.1-RS_2026_05_02 2026-05-02 6096 5957 74 na GCF_000429645.1 PRJNA224116 SAMN02440868 AUCG00000000.1 reference genome 1121034 34011 Niveispirillum irakense DSM 11586 strain=DSM 11586 na latest Scaffold Major Full 2013-09-05 ASM42964v1 DOE Joint Genome Institute GCA_000429645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/645/GCF_000429645.1_ASM42964v1/ na assembly from type material na haploid bacteria 5455784 5446975 63.000000 0 20 30 NCBI RefSeq GCF_000429645.1-RS_2026_05_02 2026-05-02 4800 4704 70 na GCF_000429665.1 PRJNA224116 SAMN02441190 AUCH00000000.1 reference genome 1121035 146938 Azovibrio restrictus DSM 23866 strain=DSM 23866 na latest Scaffold Major Full 2013-09-05 ASM42966v1 DOE Joint Genome Institute GCA_000429665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/665/GCF_000429665.1_ASM42966v1/ na assembly from type material na haploid bacteria 4025691 4023710 65.500000 0 53 56 NCBI RefSeq GCF_000429665.1-RS_2025_05_02 2025-05-02 3843 3752 67 na GCF_000429685.1 PRJNA224116 SAMN02440621 AUCI00000000.1 reference genome 1121085 384933 Salibacterium aidingense DSM 18341 strain=DSM 18341 na latest Scaffold Major Full 2013-07-15 ASM42968v1 DOE Joint Genome Institute GCA_000429685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/685/GCF_000429685.1_ASM42968v1/ na assembly from type material na haploid bacteria 4418137 4418117 44.500000 0 55 56 NCBI RefSeq GCF_000429685.1-RS_2025_12_10 2025-12-10 4483 4334 72 na GCF_000429705.1 PRJNA224116 SAMN02441191 AUCJ00000000.1 reference genome 1121086 254410 Alteribacter aurantiacus DSM 18675 strain=DSM 18675 na latest Scaffold Major Full 2013-09-05 ASM42970v1 DOE Joint Genome Institute GCA_000429705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/705/GCF_000429705.1_ASM42970v1/ na assembly from type material na haploid bacteria 4023079 4022553 42.500000 0 12 16 NCBI RefSeq GCF_000429705.1-RS_2025_05_02 2025-05-02 4017 3907 92 na GCF_000429725.1 PRJNA224116 SAMN02441192 AUCK00000000.1 reference genome 1121087 427072 Alkalicoccus chagannorensis DSM 18086 strain=DSM 18086 na latest Scaffold Major Full 2013-07-15 ASM42972v1 DOE Joint Genome Institute GCA_000429725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/725/GCF_000429725.1_ASM42972v1/ na assembly from type material na haploid bacteria 3519702 3517177 52.500000 0 38 43 NCBI RefSeq GCF_000429725.1-RS_2025_05_02 2025-05-02 3329 3224 68 na GCF_000429745.1 PRJNA224116 SAMN02440869 AUCL00000000.1 na 1121112 356829 Bifidobacterium tsurumiense DSM 17777 strain=DSM 17777 na latest Scaffold Major Full 2013-07-15 ASM42974v1 DOE Joint Genome Institute GCA_000429745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/745/GCF_000429745.1_ASM42974v1/ na assembly from type material na haploid bacteria 2166541 2166015 53.000000 0 26 27 NCBI RefSeq GCF_000429745.1-RS_2026_05_16 2026-05-16 1754 1660 57 na GCF_000429765.1 PRJNA224116 SAMN02440622 AUCM00000000.1 reference genome 1121271 220343 Gemmobacter nectariphilus DSM 15620 strain=DSM 15620 na latest Scaffold Major Full 2013-07-15 ASM42976v1 DOE Joint Genome Institute GCA_000429765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/765/GCF_000429765.1_ASM42976v1/ na assembly from type material na haploid bacteria 4523636 4521491 66.000000 0 57 63 NCBI RefSeq GCF_000429765.1-RS_2026_05_02 2026-05-02 4451 4338 53 na GCF_000429785.1 PRJNA224116 SAMN02441549 AUCN00000000.1 reference genome 1121274 230667 Chitinibacter tainanensis DSM 15459 strain=DSM 15459 na latest Scaffold Major Full 2013-09-05 ASM42978v1 DOE Joint Genome Institute GCA_000429785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/785/GCF_000429785.1_ASM42978v1/ na assembly from type material na haploid bacteria 3425989 3424644 56.000000 0 17 22 NCBI RefSeq GCF_000429785.1-RS_2025_09_02 2025-09-02 3246 3168 69 na GCF_000429805.1 PRJNA224116 SAMN02440870 AUCO00000000.1 na 1121342 1519 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain=DSM 2637 na latest Scaffold Major Full 2013-07-15 ASM42980v1 DOE Joint Genome Institute GCA_000429805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/805/GCF_000429805.1_ASM42980v1/ na assembly from type material na haploid bacteria 3022704 3021927 31.000000 0 44 45 NCBI RefSeq GCF_000429805.1-RS_2026_04_14 2026-04-14 3081 2950 76 na GCF_000429825.1 PRJNA224116 SAMN02441193 AUCP00000000.1 reference genome 1121347 329858 Cohnella thermotolerans DSM 17683 strain=DSM 17683 na latest Scaffold Major Full 2013-09-05 ASM42982v1 DOE Joint Genome Institute GCA_000429825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/825/GCF_000429825.1_ASM42982v1/ na assembly from type material na haploid bacteria 5051029 5043594 58.500000 0 138 156 NCBI RefSeq GCF_000429825.1-RS_2026_03_30 2026-03-30 4844 4608 71 na GCF_000429845.1 PRJNA224116 SAMN02440623 AUCQ00000000.1 reference genome 1121349 408558 Comamonas composti DSM 21721 strain=DSM 21721 na latest Scaffold Major Full 2013-09-05 ASM42984v1 DOE Joint Genome Institute GCA_000429845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/845/GCF_000429845.1_ASM42984v1/ na assembly from type material na haploid bacteria 4634066 4631475 63.500000 0 55 66 NCBI RefSeq GCF_000429845.1-RS_2025_12_01 2025-12-01 4191 4055 73 na GCF_000429865.1 PRJNA224116 SAMN02441550 AUCR00000000.1 reference genome 422296 1121252 Cucumibacter marinus DSM 18995 strain=DSM 18995 na latest Scaffold Major Full 2013-07-15 ASM42986v1 DOE Joint Genome Institute GCA_000429865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/865/GCF_000429865.1_ASM42986v1/ na assembly from type material na haploid bacteria 3713661 3711803 62.000000 0 22 27 NCBI RefSeq GCF_000429865.1-RS_2025_12_02 2025-12-02 3602 3535 53 na GCF_000429885.1 PRJNA224116 SAMN02440871 AUCS00000000.1 na 1121387 1863 Dermatophilus congolensis DSM 44180 = NBRC 105199 strain=DSM 44180 na latest Scaffold Major Full 2013-07-15 ASM42988v1 DOE Joint Genome Institute GCA_000429885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/885/GCF_000429885.1_ASM42988v1/ na assembly from type material na haploid bacteria 2617709 2617669 59.500000 0 10 12 NCBI RefSeq GCF_000429885.1-RS_2026_01_15 2026-01-15 2345 2262 58 na GCF_000429905.1 PRJNA224116 SAMN02441551 AUCT00000000.1 na 1121392 218208 Desulfatibacillum aliphaticivorans DSM 15576 strain=DSM 15576 na latest Scaffold Major Full 2013-07-15 ASM42990v1 DOE Joint Genome Institute GCA_000429905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/905/GCF_000429905.1_ASM42990v1/ na assembly from type material na haploid bacteria 6469960 6466389 54.500000 0 64 69 NCBI RefSeq GCF_000429905.1-RS_2026_05_16 2026-05-16 5360 5257 57 na GCF_000429925.1 PRJNA224116 SAMN02440872 AUCU00000000.1 reference genome 1121394 340467 Desulfatirhabdium butyrativorans DSM 18734 strain=DSM 18734 na latest Scaffold Major Full 2013-07-15 ASM42992v1 DOE Joint Genome Institute GCA_000429925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/925/GCF_000429925.1_ASM42992v1/ na assembly from type material na haploid bacteria 4481975 4475754 55.000000 0 73 85 NCBI RefSeq GCF_000429925.1-RS_2026_05_02 2026-05-02 3946 3841 52 na GCF_000429945.1 PRJNA224116 SAMN02440624 AUCV00000000.1 reference genome 1121403 231447 Desulfogranum japonicum DSM 18378 strain=DSM 18378 na latest Scaffold Major Full 2013-07-15 ASM42994v1 DOE Joint Genome Institute GCA_000429945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/945/GCF_000429945.1_ASM42994v1/ na assembly from type material na haploid bacteria 5800571 5794876 46.000000 0 124 136 NCBI RefSeq GCF_000429945.1-RS_2025_12_13 2025-12-13 4913 4734 60 na GCF_000429965.1 PRJNA224116 SAMN02441536 AUCW00000000.1 reference genome 1121404 160661 Desulfogranum mediterraneum DSM 13871 strain=DSM 13871 na latest Scaffold Major Full 2013-07-15 ASM42996v1 DOE Joint Genome Institute GCA_000429965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/965/GCF_000429965.1_ASM42996v1/ na assembly from type material na haploid bacteria 4796810 4784576 57.500000 0 68 79 NCBI RefSeq GCF_000429965.1-RS_2025_12_13 2025-12-13 4016 3884 65 na GCF_000429985.1 PRJNA224116 SAMN02440625 AUCX00000000.1 reference genome 1121441 47157 Maridesulfovibrio bastinii DSM 16055 strain=DSM 16055 na latest Scaffold Major Full 2013-07-15 ASM42998v1 DOE Joint Genome Institute GCA_000429985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/985/GCF_000429985.1_ASM42998v1/ na assembly from type material na haploid bacteria 3909169 3908699 43.000000 0 39 42 NCBI RefSeq GCF_000429985.1-RS_2026_05_02 2026-05-02 3575 3488 70 na GCF_000430005.1 PRJNA224116 SAMN02440626 AUCY00000000.1 reference genome 1121443 159728 Desulfovibrio cuneatus DSM 11391 strain=DSM 11391 na latest Scaffold Major Full 2013-07-15 ASM43000v1 DOE Joint Genome Institute GCA_000430005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/005/GCF_000430005.1_ASM43000v1/ na assembly from type material na haploid bacteria 3359127 3356409 53.500000 0 76 81 NCBI RefSeq GCF_000430005.1-RS_2025_08_07 2025-08-07 2803 2732 58 na GCF_000430025.1 PRJNA224116 SAMN02440857 AUCZ00000000.1 reference genome 1121899 350894 Flavobacterium suncheonense GH29-5 = DSM 17707 strain=DSM 17707 na latest Scaffold Major Full 2013-07-15 ASM43002v1 DOE Joint Genome Institute GCA_000430025.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/025/GCF_000430025.1_ASM43002v1/ na assembly from type material na haploid bacteria 2880663 2874963 40.500000 0 54 58 NCBI RefSeq GCF_000430025.1-RS_2025_12_11 2025-12-11 2764 2702 51 na GCF_000430045.1 PRJNA224116 SAMN00773126 AUQW00000000.1 reference genome 926560 52023 Calidithermus chliarophilus DSM 9957 strain=DSM 9957 na latest Scaffold Major Full 2013-07-15 ASM43004v1 JGI GCA_000430045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/045/GCF_000430045.1_ASM43004v1/ na assembly from type material na haploid bacteria 4688964 4665645 69.000000 0 9 238 NCBI RefSeq GCF_000430045.1-RS_2026_03_30 2026-03-30 4608 4449 76 na GCF_000430085.2 PRJNA224116 SAMN01832089 na na 1271864 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 strain=CFSAN002069 na latest Complete Genome Major Full 2013-11-25 ASM43008v2 FDA GCA_000430085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/085/GCF_000430085.2_ASM43008v2/ na na na haploid bacteria 4931985 4931985 52.000000 3 3 3 NCBI RefSeq GCF_000430085.2-RS_2025_02_08 2025-02-08 4815 4559 121 24903882 GCF_000430105.1 PRJNA224116 SAMN01088008 na na 1124936 28901 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 strain=41578 na latest Complete Genome Major Full 2013-07-16 ASM43010v1 FDA GCA_000430105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/105/GCF_000430105.1_ASM43010v1/ na na na haploid bacteria 4951478 4951478 52.000000 4 4 4 NCBI RefSeq GCF_000430105.1-RS_2025_02_21 2025-02-21 4862 4590 122 24732280 GCF_000430125.1 PRJNA224116 SAMN01832088 na na 1271863 28901 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 strain=CFSAN002050 na latest Complete Genome Major Full 2013-07-16 ASM43012v1 FDA GCA_000430125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/125/GCF_000430125.1_ASM43012v1/ na na na haploid bacteria 5267011 5267011 52.000000 3 3 3 NCBI RefSeq GCF_000430125.1-RS_2025_06_03 2025-06-03 5181 4919 122 25359917 GCF_000430145.2 PRJNA224116 SAMN01832087 na na 1271862 28901 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 strain=CFSAN001921 11NY04CB01-S latest Complete Genome Major Full 2013-07-16 ASM43014v3 FDA GCA_000430145.3 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/145/GCF_000430145.2_ASM43014v3/ na na na haploid bacteria 5089224 5089224 52.000000 4 4 4 NCBI RefSeq GCF_000430145.2-RS_2025_04_07 2025-04-07 5000 4719 122 24356834 GCF_000430165.1 PRJNA224116 SAMN02212496 na na 866913 28901 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 strain=08-1736 na latest Complete Genome Major Full 2013-07-16 ASM43016v1 FDA GCA_000430165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/165/GCF_000430165.1_ASM43016v1/ na na na haploid bacteria 4822189 4822189 52.000000 1 1 1 NCBI RefSeq GCF_000430165.1-RS_2025_07_25 2025-07-25 4714 4463 126 na GCF_000430205.1 PRJNA224116 SAMN02470000 ASYX00000000.1 na 1217659 29430 Acinetobacter haemolyticus CIP 64.3 = MTCC 9819 strain=MTCC 9819 na latest Contig Major Full 2013-07-16 Acinetobacter haemolyticus Institute of Microbial Technology GCA_000430205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/205/GCF_000430205.1_Acinetobacter_haemolyticus/ na assembly from type material na haploid bacteria 3384229 3384229 39.500000 0 182 182 NCBI RefSeq GCF_000430205.1-RS_2025_08_20 2025-08-20 3249 3063 69 na GCF_000430225.1 PRJNA224116 SAMN02469990 ASYZ00000000.1 na 1217666 40215 Acinetobacter junii CIP 107470 = MTCC 11364 strain=MTCC 11364 na latest Contig Major Full 2013-07-16 Acinetobacter junii Institute of Microbial Technology GCA_000430225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/225/GCF_000430225.1_Acinetobacter_junii/ na assembly from heterotypic synonym type material na haploid bacteria 3549566 3549566 38.500000 0 248 248 NCBI RefSeq GCF_000430225.1-RS_2025_12_23 2025-12-23 3430 3163 68 na GCF_000430245.1 PRJNA224116 SAMN02470001 ASYY00000000.1 na 1120926 202952 Acinetobacter gerneri DSM 14967 = CIP 107464 = MTCC 9824 strain=MTCC 9824 na latest Contig Major Full 2013-07-16 Acinetobacter gerneri Institute of Microbial Technology GCA_000430245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/245/GCF_000430245.1_Acinetobacter_gerneri/ na assembly from type material na haploid bacteria 4420969 4420969 37.500000 0 167 167 NCBI RefSeq GCF_000430245.1-RS_2026_01_27 2026-01-27 4188 4029 69 na GCF_000430385.1 PRJNA224116 SAMN02179883 na na 1338035 197 Campylobacter jejuni 32488 strain=32488 NYCB-10-03-5511-C latest Complete Genome Major Full 2013-07-16 ASM43038v1 University of California at Davis GCA_000430385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/385/GCF_000430385.1_ASM43038v1/ na na na haploid bacteria 1702398 1702398 30.500000 1 1 1 NCBI RefSeq GCF_000430385.1-RS_2025_06_29 2025-06-29 1758 1631 56 na GCF_000430405.1 PRJNA224116 SAMN02179882 na na 1338034 670 Vibrio parahaemolyticus O1:Kuk str. FDA_R31 strain=FDA_R31 FDA_R31 latest Complete Genome Major Full 2013-07-16 ASM43040v1 University of California at Davis GCA_000430405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/405/GCF_000430405.1_ASM43040v1/ na na na haploid bacteria 5223562 5223562 45.500000 2 2 2 NCBI RefSeq GCF_000430405.1-RS_2025_12_25 2025-12-25 4813 4584 172 25814612 GCF_000430425.1 PRJNA224116 SAMN02179884 na na 1338032 670 Vibrio parahaemolyticus O1:K33 str. CDC_K4557 strain=CDC_K4557 CDC_K4557 latest Complete Genome Major Full 2013-07-16 ASM43042v1 University of California at Davis GCA_000430425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/425/GCF_000430425.1_ASM43042v1/ na na na haploid bacteria 5138575 5138575 45.500000 2 2 2 NCBI RefSeq GCF_000430425.1-RS_2025_09_22 2025-09-22 4677 4482 168 25814612 GCF_000430445.1 PRJNA224116 SAMN02441411 AICW00000000.1 na 3416881 52698 Saccharomonospora iraqiensis subsp. iraqiensis strain=IQ-H1 na latest Scaffold Major Full 2013-07-16 ASM43044v1 Joint Genome Institute GCA_000430445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/445/GCF_000430445.1_ASM43044v1/ na assembly from type material na haploid bacteria 3895973 3836673 71.500000 0 139 732 NCBI RefSeq GCF_000430445.1-RS_2026_01_15 2026-01-15 4100 3770 56 na GCF_000430485.1 PRJNA224116 SAMN00203929 AKID00000000.1 na 913025 913025 Thermococcus sp. PK strain=PK na latest Scaffold Major Full 2013-07-16 ASM43048v1 JGI GCA_000430485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/485/GCF_000430485.1_ASM43048v1/ na na na haploid archaea 2176573 2164073 44.000000 0 7 132 NCBI RefSeq GCF_000430485.1-RS_2025_11_20 2025-11-20 2546 2314 52 na GCF_000430505.1 PRJNA224116 SAMN02440687 AUMD00000000.1 reference genome 1121902 997 Eisenibacter elegans DSM 3317 strain=DSM 3317 na latest Scaffold Major Full 2013-07-16 ASM43050v1 DOE Joint Genome Institute GCA_000430505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/505/GCF_000430505.1_ASM43050v1/ na assembly from type material na haploid bacteria 4030713 4024847 48.000000 0 15 22 NCBI RefSeq GCF_000430505.1-RS_2026_05_02 2026-05-02 3409 3336 55 na GCF_000430525.1 PRJNA224116 SAMN02441145 AUME00000000.1 reference genome 1122981 28128 Prevotella corporis DSM 18810 = JCM 8529 strain=DSM 18810 na latest Scaffold Major Full 2013-07-16 ASM43052v1 DOE Joint Genome Institute GCA_000430525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/525/GCF_000430525.1_ASM43052v1/ na assembly from type material na haploid bacteria 2800206 2790845 44.000000 0 84 93 NCBI RefSeq GCF_000430525.1-RS_2025_12_10 2025-12-10 2476 2348 49 na GCF_000430545.1 PRJNA224116 SAMN02441146 AUMF00000000.1 reference genome 1123347 104270 Tenacibaculum ovolyticum DSM 18103 strain=DSM 18103 na latest Scaffold Major Full 2013-07-16 ASM43054v1 DOE Joint Genome Institute GCA_000430545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/545/GCF_000430545.1_ASM43054v1/ na assembly from type material na haploid bacteria 4124462 4122291 29.500000 0 34 39 NCBI RefSeq GCF_000430545.1-RS_2025_12_10 2025-12-10 3730 3652 60 na GCF_000430565.1 PRJNA224116 SAMN02440805 AUMG00000000.1 na 1122992 386414 Hoylesella timonensis 4401737 = DSM 22865 = JCM 15640 strain=DSM 22865 na latest Scaffold Major Full 2013-07-16 ASM43056v1 DOE Joint Genome Institute GCA_000430565.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/565/GCF_000430565.1_ASM43056v1/ na assembly from type material na haploid bacteria 3156061 3155396 42.500000 0 124 126 NCBI RefSeq GCF_000430565.1-RS_2026_01_08 2026-01-08 2661 2516 48 na GCF_000430585.1 PRJNA224116 SAMN02440806 AUMH00000000.1 reference genome 1120972 122960 Alicyclobacillus herbarius DSM 13609 strain=DSM 13609 na latest Scaffold Major Full 2013-07-16 ASM43058v1 DOE Joint Genome Institute GCA_000430585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/585/GCF_000430585.1_ASM43058v1/ na assembly from type material na haploid bacteria 3310509 3308474 57.000000 0 57 59 NCBI RefSeq GCF_000430585.1-RS_2025_05_02 2025-05-02 3260 3103 80 na GCF_000430605.1 PRJNA224116 SAMN02441147 AUMI00000000.1 reference genome 1120985 82376 Anaeroarcus burkinensis DSM 6283 strain=DSM 6283 na latest Scaffold Major Full 2013-07-16 ASM43060v1 DOE Joint Genome Institute GCA_000430605.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/605/GCF_000430605.1_ASM43060v1/ na assembly from type material na haploid bacteria 3338457 3337838 49.000000 0 20 21 NCBI RefSeq GCF_000430605.1-RS_2026_04_29 2026-04-29 3195 3111 75 na GCF_000430625.1 PRJNA224116 SAMN02440807 AUMJ00000000.1 reference genome 1121002 278991 Aneurinibacillus terranovensis DSM 18919 strain=DSM 18919 na latest Scaffold Major Full 2013-07-16 ASM43062v1 DOE Joint Genome Institute GCA_000430625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/625/GCF_000430625.1_ASM43062v1/ na assembly from type material na haploid bacteria 4247673 4238041 45.000000 0 98 126 NCBI RefSeq GCF_000430625.1-RS_2025_05_02 2025-05-02 4433 4151 89 na GCF_000430645.1 PRJNA224116 SAMN02440808 AUMK00000000.1 reference genome 1121006 987 Aquimarina latercula DSM 2041 strain=DSM 2041 na latest Scaffold Major Full 2013-07-16 ASM43064v1 DOE Joint Genome Institute GCA_000430645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/645/GCF_000430645.1_ASM43064v1/ na assembly from type material na haploid bacteria 6245252 6243493 32.000000 0 28 31 NCBI RefSeq GCF_000430645.1-RS_2026_05_02 2026-05-02 5564 5478 62 na GCF_000430665.1 PRJNA224116 SAMN02441476 AUML00000000.1 na 1121007 279356 Aquimarina muelleri DSM 19832 strain=DSM 19832 na latest Scaffold Major Full 2013-07-16 ASM43066v1 DOE Joint Genome Institute GCA_000430665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/665/GCF_000430665.1_ASM43066v1/ na assembly from type material na haploid bacteria 4903219 4900421 31.500000 0 101 107 NCBI RefSeq GCF_000430665.1-RS_2026_05_16 2026-05-16 4124 4028 49 na GCF_000430685.1 PRJNA224116 SAMN02440688 AUMM00000000.1 reference genome 1123405 340097 Tuberibacillus calidus DSM 17572 strain=DSM 17572 na latest Scaffold Major Full 2013-07-16 ASM43068v1 DOE Joint Genome Institute GCA_000430685.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/685/GCF_000430685.1_ASM43068v1/ na assembly from type material na haploid bacteria 3242009 3234173 44.000000 0 81 90 NCBI RefSeq GCF_000430685.1-RS_2026_05_02 2026-05-02 3250 3085 73 na GCF_000430705.1 PRJNA224116 SAMN02441477 AUMN00000000.1 reference genome 1121019 271431 Arthrobacter castelli DSM 16402 strain=DSM 16402 na latest Scaffold Major Full 2013-07-16 ASM43070v1 DOE Joint Genome Institute GCA_000430705.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/705/GCF_000430705.1_ASM43070v1/ na assembly from type material na haploid bacteria 4585800 4582596 63.500000 0 49 53 NCBI RefSeq GCF_000430705.1-RS_2025_05_02 2025-05-02 4480 4344 56 na GCF_000430725.1 PRJNA224116 SAMN02441136 AUMO00000000.1 reference genome 1121030 364039 Azohydromonas australica DSM 1124 strain=DSM 1124 na latest Scaffold Major Full 2013-07-16 ASM43072v1 DOE Joint Genome Institute GCA_000430725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/725/GCF_000430725.1_ASM43072v1/ na assembly from type material na haploid bacteria 8786776 8748819 69.000000 0 142 211 NCBI RefSeq GCF_000430725.1-RS_2025_08_18 2025-08-18 8128 7805 70 na GCF_000430745.1 PRJNA224116 SAMN02441478 AUMP00000000.1 reference genome 1121091 225985 Fictibacillus gelatini DSM 15865 strain=DSM 15865 na latest Scaffold Major Full 2013-07-16 ASM43074v1 DOE Joint Genome Institute GCA_000430745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/745/GCF_000430745.1_ASM43074v1/ na assembly from type material na haploid bacteria 4171218 4167259 41.500000 0 69 84 NCBI RefSeq GCF_000430745.1-RS_2026_05_13 2026-05-13 4391 4187 104 na GCF_000430765.1 PRJNA224116 SAMN02440689 AUMQ00000000.1 reference genome 1121092 356658 Peribacillus kribbensis DSM 17871 strain=DSM 17871 na latest Scaffold Major Full 2013-07-16 ASM43076v1 DOE Joint Genome Institute GCA_000430765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/765/GCF_000430765.1_ASM43076v1/ na assembly from type material na haploid bacteria 5052265 5043312 43.000000 0 38 57 NCBI RefSeq GCF_000430765.1-RS_2026_05_02 2026-05-02 5074 4842 101 na GCF_000430785.1 PRJNA224116 SAMN02440795 AUMR00000000.1 reference genome 1121093 363872 Ectobacillus panaciterrae DSM 19096 strain=DSM 19096 na latest Scaffold Major Full 2013-07-16 ASM43078v1 DOE Joint Genome Institute GCA_000430785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/785/GCF_000430785.1_ASM43078v1/ na assembly from type material na haploid bacteria 5411691 5401381 40.500000 0 189 211 NCBI RefSeq GCF_000430785.1-RS_2026_05_02 2026-05-02 5513 5112 86 na GCF_000430805.1 PRJNA224116 SAMN02440690 AUMS00000000.1 reference genome 1121275 362520 Chitinilyticum aquatile DSM 21506 strain=DSM 21506 na latest Scaffold Major Full 2013-07-16 ASM43080v1 DOE Joint Genome Institute GCA_000430805.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/805/GCF_000430805.1_ASM43080v1/ na assembly from type material na haploid bacteria 3685547 3684696 60.500000 0 28 32 NCBI RefSeq GCF_000430805.1-RS_2025_09_02 2025-09-02 3559 3449 72 na GCF_000430825.1 PRJNA224116 SAMN02441479 AUMT00000000.1 reference genome 1121286 412438 Chryseobacterium daeguense DSM 19388 strain=DSM 19388 na latest Scaffold Major Full 2013-07-16 ASM43082v1 DOE Joint Genome Institute GCA_000430825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/825/GCF_000430825.1_ASM43082v1/ na assembly from type material na haploid bacteria 4214564 4214400 36.000000 0 25 27 NCBI RefSeq GCF_000430825.1-RS_2025_12_11 2025-12-11 4064 3975 62 na GCF_000430845.1 PRJNA224116 SAMN02440691 AUMU00000000.1 reference genome 1121287 456299 Chryseobacterium gregarium DSM 19109 strain=DSM 19109 na latest Scaffold Major Full 2013-07-16 ASM43084v1 DOE Joint Genome Institute GCA_000430845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/845/GCF_000430845.1_ASM43084v1/ na assembly from type material na haploid bacteria 4439376 4438326 39.500000 0 42 44 NCBI RefSeq GCF_000430845.1-RS_2025_11_21 2025-11-21 4050 3950 64 na GCF_000430865.1 PRJNA224116 SAMN02441464 AUMV00000000.1 na 1121379 317577 Deinococcus ficus DSM 19119 strain=DSM 19119 na latest Scaffold Major Full 2013-07-16 ASM43086v1 DOE Joint Genome Institute GCA_000430865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/865/GCF_000430865.1_ASM43086v1/ na assembly from type material na haploid bacteria 4144558 4144488 70.000000 0 38 39 NCBI RefSeq GCF_000430865.1-RS_2026_05_16 2026-05-16 4073 3980 72 na GCF_000430885.1 PRJNA224116 SAMN02440796 AUMW00000000.1 reference genome 1121422 265477 Desulfotruncus alcoholivorax DSM 16058 strain=DSM 16058 na latest Scaffold Major Full 2013-07-16 ASM43088v1 DOE Joint Genome Institute GCA_000430885.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/885/GCF_000430885.1_ASM43088v1/ na assembly from type material na haploid bacteria 3471050 3465803 47.000000 0 64 66 NCBI RefSeq GCF_000430885.1-RS_2025_12_09 2025-12-09 3583 3449 69 na GCF_000430905.1 PRJNA224116 SAMN02441137 AUMX00000000.1 reference genome 1122230 71518 Methanocorpusculum bavaricum DSM 4179 strain=DSM 4179 na latest Scaffold Major Full 2013-07-16 ASM43090v1 DOE Joint Genome Institute GCA_000430905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/905/GCF_000430905.1_ASM43090v1/ na assembly from type material na haploid archaea 1706782 1702614 51.500000 0 27 34 NCBI RefSeq GCF_000430905.1-RS_2025_11_21 2025-11-21 1772 1714 54 na GCF_000430955.1 PRJNA224116 SAMN02470087 AOOS00000000.1 na 1225780 204039 Dickeya dianthicola IPO 980 strain=IPO 980 na latest Chromosome Major Full 2013-07-17 DDIIPO980_1.0 James Hutton Institute GCA_000430955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/955/GCF_000430955.1_DDIIPO980_1.0/ na na na haploid bacteria 4840931 4835831 55.500000 1 27 78 NCBI RefSeq GCF_000430955.1-RS_2026_03_28 2026-03-28 4395 4190 73 23887905 GCF_000430975.2 PRJNA224116 SAMEA2272616 CBKW000000000.2 na 1327958 28901 Salmonella enterica subsp. enterica serovar Manhattan str. 111113 strain=111113 na latest Contig Major Full 2014-11-04 ASM43097v2 IZSLER-PR GCA_000430975.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/975/GCF_000430975.2_ASM43097v2/ na na na haploid bacteria 4684097 4684097 52.000000 0 18 18 NCBI RefSeq GCF_000430975.2-RS_2025_09_15 2025-09-15 4565 4332 128 25653407 GCF_000430995.1 PRJNA224116 SAMEA2271948 CAVN000000000.1 reference genome 941824 53422 Thermobrachium celere DSM 8682 strain=DSM 8682 na latest Scaffold Major Full 2013-05-03 TC1 Tampere University of Technology GCA_000430995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/430/995/GCF_000430995.1_TC1/ na assembly from type material na haploid bacteria 2644756 2445542 31.500000 0 56 162 NCBI RefSeq GCF_000430995.1-RS_2026_04_14 2026-04-14 2620 2354 150 na GCF_000431095.1 PRJNA224116 SAMEA3138442 CAWR000000000.1 na 1263061 53443 Blautia hydrogenotrophica CAG:147 na na latest Scaffold Major Full 2013-07-17 MGS147 DTU GCA_000431095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/095/GCF_000431095.1_MGS147/ derived from metagenome na na haploid bacteria 3359031 3349083 45.000000 0 59 293 NCBI RefSeq GCF_000431095.1-RS_2026_03_08 2026-03-08 3262 3094 37 na GCF_000431195.1 PRJNA224116 SAMEA3138447 CAWV000000000.1 na 1262923 1262923 Prevotella sp. CAG:255 na na latest Scaffold Major Full 2013-07-17 MGS255 DTU GCA_000431195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/195/GCF_000431195.1_MGS255/ derived from metagenome na na haploid bacteria 3485124 3482660 45.500000 0 109 182 NCBI RefSeq GCF_000431195.1-RS_2025_08_18 2025-08-18 2734 2610 40 na GCF_000431295.1 PRJNA224116 SAMEA3138452 CBEK000000000.1 na 1263033 187327 Acidaminococcus intestini CAG:325 na na latest Scaffold Major Full 2013-07-17 MGS325 DTU GCA_000431295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/295/GCF_000431295.1_MGS325/ derived from metagenome na na haploid bacteria 2161582 2158013 50.000000 0 81 177 NCBI RefSeq GCF_000431295.1-RS_2025_07_31 2025-07-31 2109 1985 48 na GCF_000431395.1 PRJNA224116 SAMEA3138457 CBEL000000000.1 na 1263086 437897 Megamonas funiformis CAG:377 na na latest Scaffold Major Full 2013-07-17 MGS377 DTU GCA_000431395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/395/GCF_000431395.1_MGS377/ derived from metagenome na na haploid bacteria 2006622 2006036 32.000000 0 125 141 NCBI RefSeq GCF_000431395.1-RS_2025_07_31 2025-07-31 1973 1906 37 na GCF_000431415.1 PRJNA224116 SAMEA3138458 CAYH000000000.1 na 1263100 1261 Peptostreptococcus anaerobius CAG:621 na na latest Scaffold Major Full 2013-07-17 MGS621 DTU GCA_000431415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/415/GCF_000431415.1_MGS621/ derived from metagenome na na haploid bacteria 1900981 1899138 36.000000 0 90 124 NCBI RefSeq GCF_000431415.1-RS_2026_03_08 2026-03-08 1787 1730 12 na GCF_000431435.1 PRJNA224116 SAMEA3138459 CAWP000000000.1 na 1262980 1262980 Veillonella sp. CAG:933 na na latest Scaffold Major Full 2013-07-17 MGS933 DTU GCA_000431435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/431/435/GCF_000431435.1_MGS933/ derived from metagenome na na haploid bacteria 2885751 2883108 42.000000 0 170 244 NCBI RefSeq GCF_000431435.1-RS_2025_08_18 2025-08-18 2915 2809 40 na GCF_000432095.1 PRJNA224116 SAMEA3138492 CBFM000000000.1 na 1263041 387090 Phocaeicola coprophilus CAG:333 na na latest Scaffold Major Full 2013-07-17 MGS333 DTU GCA_000432095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/095/GCF_000432095.1_MGS333/ derived from metagenome na na haploid bacteria 2888172 2884225 46.500000 0 127 214 NCBI RefSeq GCF_000432095.1-RS_2025_09_13 2025-09-13 2464 2334 48 na GCF_000432115.1 PRJNA224116 SAMEA3138493 CAZS000000000.1 na 1263108 33039 [Ruminococcus] torques CAG:61 na na latest Scaffold Major Full 2013-07-17 MGS61 DTU GCA_000432115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/115/GCF_000432115.1_MGS61/ derived from metagenome na na haploid bacteria 2363514 2359968 42.000000 0 94 195 NCBI RefSeq GCF_000432115.1-RS_2026_03_08 2026-03-08 2174 2063 38 na GCF_000432215.1 PRJNA224116 SAMEA3138498 CBFE000000000.1 na 1262699 1262699 Anaerostipes sp. CAG:276 na na latest Scaffold Major Full 2013-07-17 MGS276 DTU GCA_000432215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/215/GCF_000432215.1_MGS276/ derived from metagenome na na haploid bacteria 3203784 3197923 44.500000 0 46 144 NCBI RefSeq GCF_000432215.1-RS_2025_08_25 2025-08-25 3286 3171 39 na GCF_000432295.1 PRJNA224116 SAMEA3138502 CAYI000000000.1 na 1262737 1262737 Bacteroides sp. CAG:189 na na latest Scaffold Major Full 2013-07-17 MGS189 DTU GCA_000432295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/295/GCF_000432295.1_MGS189/ derived from metagenome na na haploid bacteria 5024697 5019480 42.000000 0 168 296 NCBI RefSeq GCF_000432295.1-RS_2025_08_18 2025-08-18 3979 3783 37 na GCF_000432355.1 PRJNA224116 SAMEA3138505 CAYQ000000000.1 na 1262881 1262881 Eubacterium sp. CAG:161 na na latest Scaffold Major Full 2013-07-17 MGS161 DTU GCA_000432355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/355/GCF_000432355.1_MGS161/ derived from metagenome na na haploid bacteria 2515227 2511436 35.000000 0 48 153 NCBI RefSeq GCF_000432355.1-RS_2024_08_17 2024-08-17 2329 2235 33 na GCF_000432615.1 PRJNA224116 SAMEA3138518 CAZN000000000.1 na 1263111 40545 Sutterella wadsworthensis CAG:135 na na latest Scaffold Major Full 2013-07-17 MGS135 DTU GCA_000432615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/615/GCF_000432615.1_MGS135/ derived from metagenome na na haploid bacteria 2777117 2768550 55.000000 0 298 498 NCBI RefSeq GCF_000432615.1-RS_2025_08_01 2025-08-01 2567 2346 54 na GCF_000432715.1 PRJNA224116 SAMEA3138523 CBAO000000000.1 na 1263035 214856 Alistipes finegoldii CAG:68 na na latest Scaffold Major Full 2013-07-17 MGS68 DTU GCA_000432715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/715/GCF_000432715.1_MGS68/ derived from metagenome na na haploid bacteria 2862985 2857822 58.500000 0 145 299 NCBI RefSeq GCF_000432715.1-RS_2025_08_01 2025-08-01 2566 2383 38 na GCF_000432935.1 PRJNA224116 SAMEA3138534 CBAQ000000000.1 na 1263089 626933 Odoribacter laneus CAG:561 na na latest Scaffold Major Full 2013-07-17 MGS561 DTU GCA_000432935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/432/935/GCF_000432935.1_MGS561/ derived from metagenome na na haploid bacteria 3477683 3472593 40.500000 0 46 127 NCBI RefSeq GCF_000432935.1-RS_2025_07_31 2025-07-31 2894 2781 45 na GCF_000433275.1 PRJNA224116 SAMEA3138551 CBAF000000000.1 na 1263072 218538 Dialister invisus CAG:218 na na latest Scaffold Major Full 2013-07-17 MGS218 DTU GCA_000433275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/275/GCF_000433275.1_MGS218/ derived from metagenome na na haploid bacteria 1773580 1769137 45.500000 0 45 130 NCBI RefSeq GCF_000433275.1-RS_2025_07_31 2025-07-31 1774 1694 45 na GCF_000433395.1 PRJNA224116 SAMEA3138557 CBAI000000000.1 na 1263067 154046 Hungatella hathewayi CAG:224 na na latest Scaffold Major Full 2013-07-17 MGS224 DTU GCA_000433395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/395/GCF_000433395.1_MGS224/ derived from metagenome na na haploid bacteria 5587080 5577148 48.500000 0 147 315 NCBI RefSeq GCF_000433395.1-RS_2024_06_16 2024-06-16 4984 4837 44 na GCF_000433695.1 PRJNA224116 SAMEA3138572 CBBC000000000.1 na 1262900 1262900 Fusobacterium sp. CAG:649 na na latest Scaffold Major Full 2013-07-17 MGS649 DTU GCA_000433695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/695/GCF_000433695.1_MGS649/ derived from metagenome na na haploid bacteria 2159799 2158502 26.500000 0 172 199 NCBI RefSeq GCF_000433695.1-RS_2025_08_18 2025-08-18 2158 2008 20 na GCF_000433715.1 PRJNA224116 SAMEA3138573 CBAT000000000.1 na 1263052 310297 Phocaeicola plebeius CAG:211 na na latest Scaffold Major Full 2013-07-17 MGS211 DTU GCA_000433715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/715/GCF_000433715.1_MGS211/ derived from metagenome na na haploid bacteria 3276499 3272757 45.000000 0 177 266 NCBI RefSeq GCF_000433715.1-RS_2024_12_16 2024-12-16 2786 2594 53 na GCF_000433815.1 PRJNA224116 SAMEA3138578 CBBB000000000.1 na 1262756 1262756 Blautia sp. CAG:257 na na latest Scaffold Major Full 2013-07-17 MGS257 DTU GCA_000433815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/815/GCF_000433815.1_MGS257/ derived from metagenome na na haploid bacteria 2866244 2852468 44.000000 0 153 332 NCBI RefSeq GCF_000433815.1-RS_2025_08_25 2025-08-25 2759 2612 31 na GCF_000433835.1 PRJNA224116 SAMEA3138579 CBBD000000000.1 na 1263063 261299 Intestinibacter bartlettii CAG:1329 na na latest Scaffold Major Full 2013-07-17 MGS1329 DTU GCA_000433835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/433/835/GCF_000433835.1_MGS1329/ derived from metagenome na na haploid bacteria 2961274 2959939 28.500000 0 31 61 NCBI RefSeq GCF_000433835.1-RS_2026_03_08 2026-03-08 2746 2711 16 na GCF_000434235.1 PRJNA224116 SAMEA3138599 CBGE000000000.1 na 1262693 1262693 Alistipes sp. CAG:268 na na latest Scaffold Major Full 2013-07-17 MGS268 DTU GCA_000434235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/434/235/GCF_000434235.1_MGS268/ derived from metagenome na na haploid bacteria 2678396 2672961 61.500000 0 64 199 NCBI RefSeq GCF_000434235.1-RS_2025_08_18 2025-08-18 2339 2196 45 na GCF_000434255.1 PRJNA224116 SAMEA3138600 CBHF000000000.1 na 1262956 1262956 Ruminococcus sp. CAG:379 na na latest Scaffold Major Full 2013-07-17 MGS379 DTU GCA_000434255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/434/255/GCF_000434255.1_MGS379/ derived from metagenome na na haploid bacteria 2164906 2158593 54.500000 0 144 306 NCBI RefSeq GCF_000434255.1-RS_2025_08_18 2025-08-18 2178 2048 33 na GCF_000434315.1 PRJNA224116 SAMEA3138603 CBBN000000000.1 na 1262880 1262880 Eubacterium sp. CAG:156 na na latest Scaffold Major Full 2013-07-17 MGS156 DTU GCA_000434315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/434/315/GCF_000434315.1_MGS156/ derived from metagenome na na haploid bacteria 2450450 2448639 32.500000 0 85 128 NCBI RefSeq GCF_000434315.1-RS_2024_05_31 2024-05-31 2182 2122 28 na GCF_000434655.1 PRJNA224116 SAMEA3138620 CBHG000000000.1 na 1262805 1262805 Clostridium sp. CAG:43 na na latest Scaffold Major Full 2013-07-17 MGS43 DTU GCA_000434655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/434/655/GCF_000434655.1_MGS43/ derived from metagenome na na haploid bacteria 2618944 2607123 49.000000 0 153 442 NCBI RefSeq GCF_000434655.1-RS_2024_08_11 2024-08-11 2539 2379 32 na GCF_000434895.1 PRJNA224116 SAMEA2272651 CBGL000000000.1 na 1263101 626940 Phascolarctobacterium succinatutens CAG:287 na na latest Scaffold Major Full 2013-07-17 MGS287 DTU GCA_000434895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/434/895/GCF_000434895.1_MGS287/ derived from metagenome na na haploid bacteria 2395176 2393939 46.500000 0 96 145 NCBI RefSeq GCF_000434895.1-RS_2025_07_31 2025-07-31 2325 2222 43 na GCF_000435035.1 PRJNA224116 SAMEA3138638 CAXO000000000.1 na 1262916 1262916 Porphyromonas sp. CAG:1061 na na latest Scaffold Major Full 2013-07-17 MGS1061 DTU GCA_000435035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/035/GCF_000435035.1_MGS1061/ derived from metagenome na na haploid bacteria 2029090 2021023 47.000000 0 156 344 NCBI RefSeq GCF_000435035.1-RS_2024_07_05 2024-07-05 1825 1707 39 na GCF_000435115.1 PRJNA224116 SAMEA3138642 CBDA000000000.1 na 1262744 1262744 Bacteroides sp. CAG:633 na na latest Scaffold Major Full 2013-07-17 MGS633 DTU GCA_000435115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/115/GCF_000435115.1_MGS633/ derived from metagenome na na haploid bacteria 3641748 3636452 47.500000 0 225 383 NCBI RefSeq GCF_000435115.1-RS_2025_08_18 2025-08-18 3137 2944 51 na GCF_000435155.1 PRJNA224116 SAMEA3138644 CBHT000000000.1 na 1262869 1262869 Dialister sp. CAG:357 na na latest Scaffold Major Full 2013-07-17 MGS357 DTU GCA_000435155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/155/GCF_000435155.1_MGS357/ derived from metagenome na na haploid bacteria 1971402 1967790 49.000000 0 146 235 NCBI RefSeq GCF_000435155.1-RS_2024_07_05 2024-07-05 1904 1829 38 na GCF_000435315.1 PRJNA224116 SAMEA3138652 CBCJ000000000.1 na 1263040 310298 Phocaeicola coprocola CAG:162 na na latest Scaffold Major Full 2013-07-17 MGS162 DTU GCA_000435315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/315/GCF_000435315.1_MGS162/ derived from metagenome na na haploid bacteria 3142034 3138897 41.000000 0 183 265 NCBI RefSeq GCF_000435315.1-RS_2025_01_08 2025-01-08 2607 2470 35 na GCF_000435435.1 PRJNA224116 SAMEA3138658 CBGS000000000.1 na 1262694 1262694 Alistipes sp. CAG:29 na na latest Scaffold Major Full 2013-07-17 MGS29 DTU GCA_000435435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/435/GCF_000435435.1_MGS29/ derived from metagenome na na haploid bacteria 3127447 3122790 58.500000 0 122 246 NCBI RefSeq GCF_000435435.1-RS_2025_01_08 2025-01-08 2753 2578 40 na GCF_000435835.1 PRJNA224116 SAMEA3138678 CBDC000000000.1 na 1262780 1262780 Clostridium sp. CAG:221 na na latest Scaffold Major Full 2013-07-17 MGS221 DTU GCA_000435835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/835/GCF_000435835.1_MGS221/ derived from metagenome na na haploid bacteria 3093482 3090882 29.000000 0 84 126 NCBI RefSeq GCF_000435835.1-RS_2024_08_17 2024-08-17 3045 2947 24 na GCF_000435935.1 PRJNA224116 SAMEA3138683 CBFS000000000.1 na 1262962 1262962 Ruminococcus sp. CAG:57 na na latest Scaffold Major Full 2013-07-17 MGS57 DTU GCA_000435935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/435/935/GCF_000435935.1_MGS57/ derived from metagenome na na haploid bacteria 2531194 2522946 43.000000 0 121 261 NCBI RefSeq GCF_000435935.1-RS_2024_08_11 2024-08-11 2463 2368 38 na GCF_000436015.1 PRJNA224116 SAMEA3138687 CBGI000000000.1 na 1262931 1262931 Prevotella sp. CAG:592 na na latest Scaffold Major Full 2013-07-17 MGS592 DTU GCA_000436015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/015/GCF_000436015.1_MGS592/ derived from metagenome na na haploid bacteria 2726024 2722986 48.500000 0 174 273 NCBI RefSeq GCF_000436015.1-RS_2025_08_18 2025-08-18 2218 2105 37 na GCF_000436315.1 PRJNA224116 SAMEA3138700 CBDT000000000.1 na 1262912 1262912 Parabacteroides sp. CAG:2 na na latest Scaffold Major Full 2013-07-17 MGS2 DTU GCA_000436315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/315/GCF_000436315.1_MGS2/ derived from metagenome na na haploid bacteria 4561326 4557807 45.000000 0 83 171 NCBI RefSeq GCF_000436315.1-RS_2024_07_05 2024-07-05 3870 3679 63 na GCF_000436355.1 PRJNA224116 SAMEA3138702 CBJI000000000.1 na 1263036 28117 Alistipes putredinis CAG:67 na na latest Scaffold Major Full 2013-07-17 MGS67 DTU GCA_000436355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/355/GCF_000436355.1_MGS67/ derived from metagenome na na haploid bacteria 2155210 2152768 54.500000 0 50 118 NCBI RefSeq GCF_000436355.1-RS_2025_08_01 2025-08-01 1961 1855 43 na GCF_000436575.1 PRJNA224116 SAMEA3138713 CBEC000000000.1 na 1262787 1262787 Clostridium sp. CAG:265 na na latest Scaffold Major Full 2013-07-17 MGS265 DTU GCA_000436575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/575/GCF_000436575.1_MGS265/ derived from metagenome na na haploid bacteria 2518779 2517156 29.000000 0 69 95 NCBI RefSeq GCF_000436575.1-RS_2024_08_17 2024-08-17 2403 2327 29 na GCF_000436615.1 PRJNA224116 SAMEA3138715 CBED000000000.1 na 1262755 1262755 Blautia sp. CAG:237 na na latest Scaffold Major Full 2013-07-17 MGS237 DTU GCA_000436615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/615/GCF_000436615.1_MGS237/ derived from metagenome na na haploid bacteria 2898194 2894531 45.000000 0 131 225 NCBI RefSeq GCF_000436615.1-RS_2025_08_25 2025-08-25 2764 2640 29 na GCF_000436655.1 PRJNA224116 SAMEA3138717 CBEF000000000.1 na 1263039 626929 Bacteroides clarus CAG:160 na na latest Scaffold Major Full 2013-07-17 MGS160 DTU GCA_000436655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/655/GCF_000436655.1_MGS160/ derived from metagenome na na haploid bacteria 3654610 3650495 45.500000 0 96 205 NCBI RefSeq GCF_000436655.1-RS_2025_07_31 2025-07-31 3067 2892 39 na GCF_000436875.1 PRJNA224116 SAMEA3138728 CBFT000000000.1 na 1262910 1262910 Oscillibacter sp. CAG:155 na na latest Scaffold Major Full 2013-07-17 MGS155 DTU GCA_000436875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/875/GCF_000436875.1_MGS155/ derived from metagenome na na haploid bacteria 2277379 2271197 59.500000 0 141 244 NCBI RefSeq GCF_000436875.1-RS_2024_09_10 2024-09-10 2328 2227 29 na GCF_000436895.1 PRJNA224116 SAMEA3138729 CAZH000000000.1 na 1263095 454154 Paraprevotella clara CAG:116 na na latest Scaffold Major Full 2013-07-17 MGS116 DTU GCA_000436895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/436/895/GCF_000436895.1_MGS116/ derived from metagenome na na haploid bacteria 3652220 3649920 48.500000 0 69 152 NCBI RefSeq GCF_000436895.1-RS_2025_08_09 2025-08-09 2867 2731 44 na GCF_000437075.1 PRJNA224116 SAMEA3138738 CBIA000000000.1 na 1262691 1262691 Akkermansia sp. CAG:344 na na latest Scaffold Major Full 2013-07-17 MGS344 DTU GCA_000437075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/075/GCF_000437075.1_MGS344/ derived from metagenome na na haploid bacteria 3024253 3019238 58.000000 0 78 191 NCBI RefSeq GCF_000437075.1-RS_2024_05_05 2024-05-05 2625 2516 49 na GCF_000437175.1 PRJNA224116 SAMEA3138743 CBIH000000000.1 na 1262954 1262954 Ruminococcus sp. CAG:330 na na latest Scaffold Major Full 2013-07-17 MGS330 DTU GCA_000437175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/175/GCF_000437175.1_MGS330/ derived from metagenome na na haploid bacteria 2474598 2470991 52.500000 0 130 215 NCBI RefSeq GCF_000437175.1-RS_2024_08_11 2024-08-11 2390 2291 50 na GCF_000437535.1 PRJNA224116 SAMEA3138761 CBIT000000000.1 na 1263103 363265 Leyella stercorea CAG:629 na na latest Scaffold Major Full 2013-07-17 MGS629 DTU GCA_000437535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/535/GCF_000437535.1_MGS629/ derived from metagenome na na haploid bacteria 2448136 2444690 50.000000 0 207 304 NCBI RefSeq GCF_000437535.1-RS_2024_08_11 2024-08-11 2148 2023 42 na GCF_000437615.1 PRJNA224116 SAMEA3138765 CBIN000000000.1 na 1263076 31971 Amedibacillus dolichus CAG:375 na na latest Scaffold Major Full 2013-07-17 MGS375 DTU GCA_000437615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/615/GCF_000437615.1_MGS375/ derived from metagenome na na haploid bacteria 2025104 2016555 37.500000 0 117 336 NCBI RefSeq GCF_000437615.1-RS_2025_07_31 2025-07-31 2183 2069 29 na GCF_000437715.1 PRJNA224116 SAMEA3138770 CBIQ000000000.1 na 1262767 1262767 Catenibacterium sp. CAG:290 na na latest Scaffold Major Full 2013-07-17 MGS290 DTU GCA_000437715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/715/GCF_000437715.1_MGS290/ derived from metagenome na na haploid bacteria 2018079 2016305 33.500000 0 121 158 NCBI RefSeq GCF_000437715.1-RS_2024_07_05 2024-07-05 2093 2023 26 na GCF_000437815.1 PRJNA224116 SAMEA3138775 CBJX000000000.1 na 1262687 1262687 Acidaminococcus sp. CAG:542 na na latest Scaffold Major Full 2013-07-17 MGS542 DTU GCA_000437815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/437/815/GCF_000437815.1_MGS542/ derived from metagenome na na haploid bacteria 2044712 2038380 56.500000 0 119 244 NCBI RefSeq GCF_000437815.1-RS_2025_08_18 2025-08-18 2033 1920 48 na GCF_000438455.1 PRJNA224116 SAMEA2272510 CAVG000000000.1 reference genome 1232430 1232430 Nosocomiicoccus massiliensis strain=NP2 na latest Contig Major Full 2013-07-03 Nosocomiicoccus_NP2_v1 ebi GCA_000438455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/455/GCF_000438455.1_Nosocomiicoccus_NP2_v1/ na assembly from type material na haploid bacteria 1509734 1509734 36.500000 0 154 154 NCBI RefSeq GCF_000438455.1-RS_2026_03_21 2026-03-21 1657 1573 47 na GCF_000438495.1 PRJNA224116 SAMEA2272629 CBKY000000000.1 na 1338534 210 Helicobacter pylori HPARG63 strain=HPARG63 na latest Contig Major Full 2013-07-12 HP63C IMPAM GCA_000438495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/495/GCF_000438495.1_HP63C/ na na na haploid bacteria 1668677 1668677 39.000000 0 34 34 NCBI RefSeq GCF_000438495.1-RS_2026_01_13 2026-01-13 1613 1480 42 na GCF_000438765.1 PRJNA224116 SAMN02470829 ASWX00000000.1 na 1327994 1351 Enterococcus faecalis 10244 strain=10244 na latest Contig Major Full 2013-07-12 ASM43876v1 Research Institute of Physical-Chemical Medicine GCA_000438765.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/765/GCF_000438765.1_ASM43876v1/ na na na haploid bacteria 3112289 3112289 37.500000 1 79 79 NCBI RefSeq GCF_000438765.1-RS_2026_01_16 2026-01-16 3103 2944 53 na GCF_000438785.2 PRJNA224116 SAMN02471760 ATWU00000000.1 na 1219067 691 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 strain=DSM 759 na latest Scaffold Minor Full 2013-07-19 ASM43878v2 University of Florence GCA_000438785.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/785/GCF_000438785.2_ASM43878v2/ na assembly from type material na haploid bacteria 5113814 5113774 45.000000 0 172 176 NCBI RefSeq GCF_000438785.2-RS_2026_02_02 2026-02-02 4730 4493 78 23969053 GCF_000438805.2 PRJNA224116 SAMN02802538 ATEV00000000.2 na 1315314 650003 Vibrio paracholerae VCC19 strain=VCC19 na latest Contig Major Full 2014-05-30 VCC19 Rede Paraense de genômica e proteômica GCA_000438805.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/805/GCF_000438805.2_VCC19/ na na na haploid bacteria 4134889 4134889 47.000000 0 54 54 NCBI RefSeq GCF_000438805.2-RS_2026_01_24 2026-01-24 3914 3561 113 25377699 GCF_000438825.1 PRJNA224116 SAMN02603297 na na 1348660 82996 Serratia plymuthica S13 na S13 latest Complete Genome Major Full 2013-07-05 ASM43882v1 Graz University of Technology GCA_000438825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/825/GCF_000438825.1_ASM43882v1/ na na na haploid bacteria 5467306 5467306 56.000000 1 1 1 NCBI RefSeq GCF_000438825.1-RS_2025_12_13 2025-12-13 5131 4944 124 23929484 GCF_000438845.1 PRJNA224116 SAMN02440800 AUOX00000000.1 na 1121308 1496 Clostridioides difficile ATCC 9689 = DSM 1296 strain=DSM 1296 na latest Scaffold Major Full 2013-07-19 ASM43884v1 DOE Joint Genome Institute GCA_000438845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/845/GCF_000438845.1_ASM43884v1/ na assembly from type material na haploid bacteria 4213273 4209919 28.500000 0 30 41 NCBI RefSeq GCF_000438845.1-RS_2026_02_28 2026-02-28 3937 3843 52 na GCF_000438865.1 PRJNA224116 SAMN02470630 ARYE00000000.1 na 1310163 197 Campylobacter jejuni subsp. jejuni HN-CJD07035 strain=HN-CJD07035 na latest Scaffold Major Full 2013-07-19 HN-CJD07035 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China GCA_000438865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/438/865/GCF_000438865.1_HN-CJD07035/ na na na haploid bacteria 1653866 1652971 30.500000 0 5 13 NCBI RefSeq GCF_000438865.1-RS_2025_06_28 2025-06-28 1708 1615 41 26197476 GCF_000439045.1 PRJNA224116 SAMN02440709 AUUD00000000.1 na 1123317 1310 Streptococcus sobrinus DSM 20742 = ATCC 33478 strain=ATCC 33478 na latest Contig Major Full 2013-07-19 ASM43904v1 DOE Joint Genome Institute GCA_000439045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/045/GCF_000439045.1_ASM43904v1/ na assembly from type material na haploid bacteria 2133594 2133594 43.500000 0 54 54 NCBI RefSeq GCF_000439045.1-RS_2026_05_16 2026-05-16 2105 1959 46 na GCF_000439065.1 PRJNA224116 SAMN02440707 AUTZ00000000.1 na 1122984 28131 Prevotella intermedia ATCC 25611 = DSM 20706 strain=DSM 20706 na latest Scaffold Major Full 2013-07-19 ASM43906v1 DOE Joint Genome Institute GCA_000439065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/065/GCF_000439065.1_ASM43906v1/ na assembly from type material na haploid bacteria 2564533 2562852 43.500000 0 21 25 NCBI RefSeq GCF_000439065.1-RS_2026_01_08 2026-01-08 2158 2057 51 na GCF_000439085.1 PRJNA224116 SAMN02440792 AUUA00000000.1 na 1005999 82981 Leminorella grimontii ATCC 33999 = DSM 5078 strain=DSM 5078 na latest Scaffold Major Full 2013-07-19 ASM43908v1 DOE Joint Genome Institute GCA_000439085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/085/GCF_000439085.1_ASM43908v1/ na assembly from type material na haploid bacteria 4219992 4219592 54.000000 0 37 39 NCBI RefSeq GCF_000439085.1-RS_2026_05_16 2026-05-16 3874 3750 74 na GCF_000439105.1 PRJNA224116 SAMN02440708 AUUB00000000.1 na 1121315 36841 Terrisporobacter glycolicus ATCC 14880 = DSM 1288 strain=DSM 1288 na latest Scaffold Major Full 2013-07-19 ASM43910v1 DOE Joint Genome Institute GCA_000439105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/105/GCF_000439105.1_ASM43910v1/ na assembly from type material na haploid bacteria 4020458 4018741 28.500000 0 17 20 NCBI RefSeq GCF_000439105.1-RS_2026_02_27 2026-02-27 3943 3858 63 na GCF_000439125.1 PRJNA224116 SAMN02440793 AUUC00000000.1 na 1121114 33035 Blautia producta ATCC 27340 = DSM 2950 strain=DSM 2950 na latest Scaffold Major Full 2013-07-19 ASM43912v1 DOE Joint Genome Institute GCA_000439125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/125/GCF_000439125.1_ASM43912v1/ na assembly from type material na haploid bacteria 6088658 6080846 45.500000 0 72 84 NCBI RefSeq GCF_000439125.1-RS_2026_02_27 2026-02-27 5710 5504 73 na GCF_000439165.1 PRJNA224116 SAMN02469602 ATAK00000000.1 na 1341693 573 Klebsiella pneumoniae subsp. pneumoniae MP14 strain=MP14 na latest Contig Major Full 2013-07-22 KKPNMP14 Chunlab, Inc. GCA_000439165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/165/GCF_000439165.1_KKPNMP14/ na na na haploid bacteria 5661622 5661622 57.000000 0 186 186 NCBI RefSeq GCF_000439165.1-RS_2025_08_18 2025-08-18 5797 5540 96 na GCF_000439185.1 PRJNA224116 SAMN02469600 ATEZ00000000.1 na 1343063 573 Klebsiella pneumoniae subsp. pneumoniae UKKV901664 strain=UKKV901664 na latest Scaffold Major Full 2013-07-22 UKKV901664 Chunlab, Inc. GCA_000439185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/185/GCF_000439185.1_UKKV901664/ na na na haploid bacteria 5756360 5756334 57.000000 0 200 202 NCBI RefSeq GCF_000439185.1-RS_2025_08_18 2025-08-18 5899 5665 87 na GCF_000439225.1 PRJNA224116 SAMN02472045 APLP00000000.1 na 1300225 358 Agrobacterium tumefaciens WRT31 strain=WRT31 na latest Chromosome Major Full 2013-10-22 AtWRT31V1.0 Institut des Sciences du vegetal GCA_000439225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/225/GCF_000439225.1_AtWRT31V1.0/ na na na haploid bacteria 5878747 5877155 58.500000 2 4 10 NCBI RefSeq GCF_000439225.1-RS_2026_04_23 2026-04-23 5576 5410 73 23969055 GCF_000439255.1 PRJNA224116 SAMN02603391 na na 1197719 54736 Salmonella bongori N268-08 strain=N268-08 na latest Complete Genome Major Full 2013-07-23 ASM43925v1 Institute of Food, Nutrition and Health, ETH Zurich GCA_000439255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/255/GCF_000439255.1_ASM43925v1/ na na na haploid bacteria 4773537 4773537 51.500000 2 2 2 NCBI RefSeq GCF_000439255.1-RS_2026_04_26 2026-04-26 4640 4339 117 na GCF_000439275.1 PRJNA224116 SAMN02604178 na na 1358027 1598 Limosilactobacillus reuteri TD1 strain=TD1 na latest Complete Genome Major Full 2013-07-23 ASM43927v1 University of Florida GCA_000439275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/275/GCF_000439275.1_ASM43927v1/ na na na haploid bacteria 2145445 2145445 39.000000 1 1 1 NCBI RefSeq GCF_000439275.1-RS_2025_09_10 2025-09-10 2047 1923 92 24812223 GCF_000439295.2 PRJNA224116 SAMN02641597 na na 1321941 210 Helicobacter pylori UM298 strain=UM298 na latest Complete Genome Major Full 2014-09-19 ASM43929v2 University of Malaya GCA_000439295.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/295/GCF_000439295.2_ASM43929v2/ na na na haploid bacteria 1594544 1594544 39.000000 1 1 1 NCBI RefSeq GCF_000439295.2-RS_2026_04_16 2026-04-16 1554 1431 45 23957912 GCF_000439375.1 PRJNA224116 SAMN02199362 ATMI00000000.1 reference genome 480813 480813 Tatumella saanichensis strain=NML 06-3099 na latest Contig Major Full 2013-07-23 06-3099_v1 Public Health Agency of Canada GCA_000439375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/375/GCF_000439375.1_06-3099_v1/ na assembly from type material na haploid bacteria 3318618 3318618 51.500000 0 56 56 NCBI RefSeq GCF_000439375.1-RS_2026_04_02 2026-04-02 3195 3027 98 25807976 GCF_000439415.2 PRJNA224116 SAMN01823701 na na 1173427 28901 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 strain=CFSAN000189 na latest Complete Genome Major Full 2019-04-24 ASM43941v2 Center for Food Safety and Applied Nutrition GCA_000439415.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/415/GCF_000439415.2_ASM43941v2/ na na na haploid bacteria 4806605 4806605 52.000000 2 2 2 NCBI RefSeq GCF_000439415.2-RS_2025_06_07 2025-06-07 4653 4416 118 24158624 GCF_000439435.1 PRJNA224116 SAMN02602966 na reference genome 1276220 2145 Spiroplasma taiwanense CT-1 strain=CT-1 na latest Complete Genome Major Full 2013-07-17 ASM43943v1 Academia Sinica GCA_000439435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/435/GCF_000439435.1_ASM43943v1/ na assembly from type material na haploid bacteria 1086278 1086278 24.000000 2 2 2 NCBI RefSeq GCF_000439435.1-RS_2025_12_13 2025-12-13 1153 1093 35 23873917 GCF_000439455.1 PRJNA224116 SAMN02602967 na reference genome 1276221 216936 Spiroplasma diminutum CUAS-1 strain=CUAS-1 na latest Complete Genome Major Full 2013-07-17 ASM43945v1 Academia Sinica GCA_000439455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/455/GCF_000439455.1_ASM43945v1/ na assembly from type material na haploid bacteria 945296 945296 25.500000 1 1 1 NCBI RefSeq GCF_000439455.1-RS_2026_03_03 2026-03-03 894 857 35 23873917 GCF_000439495.1 PRJNA224116 SAMN02604122 na na 1300254 314275 Alteromonas mediterranea MED64 strain=Aegean Sea MED64 na latest Complete Genome Major Full 2013-07-08 ASM43949v1 University Miguel Hernandez GCA_000439495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/495/GCF_000439495.1_ASM43949v1/ na na na haploid bacteria 4397537 4397537 45.000000 1 1 1 NCBI RefSeq GCF_000439495.1-RS_2026_01_20 2026-01-20 3891 3761 86 23729633 GCF_000439515.1 PRJNA224116 SAMN02604123 na na 1300255 314275 Alteromonas mediterranea U4 strain=Ionian Sea U4 na latest Chromosome Major Full 2013-07-08 ASM43951v1 University Miguel Hernandez GCA_000439515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/515/GCF_000439515.1_ASM43951v1/ na na na haploid bacteria 4624578 4624568 44.500000 2 2 3 NCBI RefSeq GCF_000439515.1-RS_2026_02_15 2026-02-15 4136 4002 76 23729633 GCF_000439535.1 PRJNA224116 SAMN02604128 na na 1300256 314275 Alteromonas mediterranea U7 strain=Ionian Sea U7 na latest Complete Genome Major Full 2013-07-08 ASM43953v1 University Miguel Hernandez GCA_000439535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/535/GCF_000439535.1_ASM43953v1/ na na na haploid bacteria 4442936 4442936 45.000000 1 1 1 NCBI RefSeq GCF_000439535.1-RS_2026_03_03 2026-03-03 3922 3789 77 23729633 GCF_000439555.1 PRJNA224116 SAMN02604125 na na 1300257 314275 Alteromonas mediterranea U8 strain=Ionian Sea U8 na latest Complete Genome Major Full 2013-07-08 ASM43955v1 University Miguel Hernandez GCA_000439555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/555/GCF_000439555.1_ASM43955v1/ na na na haploid bacteria 4395035 4395035 45.000000 1 1 1 NCBI RefSeq GCF_000439555.1-RS_2025_09_19 2025-09-19 3875 3728 81 23729633 GCF_000439575.1 PRJNA224116 SAMN02604126 na na 1300258 314275 Alteromonas mediterranea UM7 strain=Ionian Sea UM7 na latest Complete Genome Major Full 2013-07-08 ASM43957v1 University Miguel Hernandez GCA_000439575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/575/GCF_000439575.1_ASM43957v1/ na na na haploid bacteria 4931660 4931660 44.500000 2 2 2 NCBI RefSeq GCF_000439575.1-RS_2026_03_03 2026-03-03 4379 4220 83 23729633 GCF_000439595.1 PRJNA224116 SAMN02604127 na na 1300259 314275 Alteromonas mediterranea UM4b strain=Ionian Sea UM4b na latest Complete Genome Major Full 2013-07-08 ASM43959v1 University Miguel Hernandez GCA_000439595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/595/GCF_000439595.1_ASM43959v1/ na na na haploid bacteria 4438767 4438767 45.000000 1 1 1 NCBI RefSeq GCF_000439595.1-RS_2026_03_03 2026-03-03 3935 3793 76 23729633 GCF_000439695.1 PRJNA224116 SAMN02603568 na na 1335307 28450 Burkholderia pseudomallei MSHR305 strain=MSHR305 na latest Complete Genome Major Full 2013-07-24 ASM43969v1 Los Alamos National Laboratory GCA_000439695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/695/GCF_000439695.1_ASM43969v1/ na na na haploid bacteria 7428072 7428072 68.000000 2 2 2 NCBI RefSeq GCF_000439695.1-RS_2026_03_21 2026-03-21 6659 6404 76 23969058 GCF_000439735.1 PRJNA224116 SAMN02262084 na na 1366053 75985 Mannheimia haemolytica USMARC_2286 strain=USMARC_2286 na latest Complete Genome Major Full 2013-07-24 ASM43973v1 USDA-ARS U.S. Meat Animal Research Center GCA_000439735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/735/GCF_000439735.1_ASM43973v1/ na na na haploid bacteria 2658507 2658507 41.000000 1 1 1 NCBI RefSeq GCF_000439735.1-RS_2026_04_26 2026-04-26 2730 2562 87 na GCF_000439755.1 PRJNA224116 SAMN02604172 na na 1184253 948 Anaplasma phagocytophilum str. HZ2 strain=HZ2 na latest Complete Genome Major Full 2013-07-24 ASM43975v1 University of Florida GCA_000439755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/755/GCF_000439755.1_ASM43975v1/ na na na haploid bacteria 1477581 1477581 41.500000 1 1 1 NCBI RefSeq GCF_000439755.1-RS_2026_01_08 2026-01-08 1173 1027 44 na GCF_000439775.1 PRJNA224116 SAMN02604171 na na 1173064 948 Anaplasma phagocytophilum str. JM strain=JM na latest Complete Genome Major Full 2013-07-24 ASM43977v1 University of Florida GCA_000439775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/775/GCF_000439775.1_ASM43977v1/ na na na haploid bacteria 1481598 1481598 41.500000 1 1 1 NCBI RefSeq GCF_000439775.1-RS_2026_01_08 2026-01-08 1176 1037 44 na GCF_000439795.1 PRJNA224116 SAMN02604173 na na 1184254 948 Anaplasma phagocytophilum str. Dog2 strain=Dog2 na latest Chromosome Major Full 2013-07-24 ASM43979v1 University of Florida GCA_000439795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/795/GCF_000439795.1_ASM43979v1/ na na na haploid bacteria 1473302 1473202 41.500000 1 1 2 NCBI RefSeq GCF_000439795.1-RS_2026_01_08 2026-01-08 1180 1038 44 na GCF_000439815.2 PRJNA224116 SAMN02470269 AOSX00000000.1 na 1248417 1491 Clostridium botulinum Af84 strain=Af84 na latest Contig Major Full 2014-12-01 ASM43981v2 Los Alamos National Laboratory GCA_000439815.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/815/GCF_000439815.2_ASM43981v2/ na na na haploid bacteria 4086083 4086083 28.000000 1 43 43 NCBI RefSeq GCF_000439815.2-RS_2026_06_16 2026-06-16 4055 3823 104 23637798 GCF_000439835.1 PRJNA224116 SAMN02207969 ATKO00000000.1 na 1348335 1280 Staphylococcus aureus LCT-SA67 strain=LCT-SA67 na latest Scaffold Major Full 2013-07-24 LCT-SA67 GBI GCA_000439835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/835/GCF_000439835.1_LCT-SA67/ na na na haploid bacteria 2792125 2754153 32.500000 0 5 58 NCBI RefSeq GCF_000439835.1-RS_2025_02_07 2025-02-07 2746 2602 49 24558241 GCF_000439855.1 PRJNA224116 SAMN02469367 ATJT00000000.1 na 1348564 287 Pseudomonas aeruginosa LCT-PA220 strain=LCT-PA220 na latest Scaffold Major Full 2013-07-24 SOAPdenovo BGI Research Institute GCA_000439855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/855/GCF_000439855.1_SOAPdenovo/ na na na haploid bacteria 6848295 6753508 66.000000 0 82 190 NCBI RefSeq GCF_000439855.1-RS_2025_04_26 2025-04-26 6478 6308 61 24625870 GCF_000439875.1 PRJNA224116 SAMN02469364 ATJU00000000.1 na 1348339 287 Pseudomonas aeruginosa LCT-PA41 strain=LCT-PA41 na latest Scaffold Major Full 2013-07-24 SOAPdenovo BGI Research Institute GCA_000439875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/875/GCF_000439875.1_SOAPdenovo/ na na na haploid bacteria 6851005 6753803 66.000000 0 88 189 NCBI RefSeq GCF_000439875.1-RS_2025_02_08 2025-02-08 6479 6310 58 24407638 GCF_000439895.1 PRJNA224116 SAMN02199042 ATMJ00000000.1 reference genome 1005995 82987 Tatumella ptyseos ATCC 33301 strain=ATCC 33301 na latest Contig Major Full 2013-07-23 atcc_33301_v1 Public Health Agency of Canada GCA_000439895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/895/GCF_000439895.1_atcc_33301_v1/ na assembly from type material na haploid bacteria 3539047 3539047 51.500000 0 85 85 NCBI RefSeq GCF_000439895.1-RS_2026_04_26 2026-04-26 3350 3202 85 na GCF_000439915.2 PRJNA224116 SAMN02470136 na na 1346615 1596 Lactobacillus gasseri 2016 strain=2016 na latest Complete Genome Major Full 2022-01-18 ASM43991v2 Kingston University GCA_000439915.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/439/915/GCF_000439915.2_ASM43991v2/ na na na haploid bacteria 1892784 1892784 35.500000 2 2 2 NCBI RefSeq GCF_000439915.2-RS_2026_01_02 2026-01-02 1862 1718 100 23969051 GCF_000440015.1 PRJNA224116 SAMN02470629 ARWV00000000.1 na 1310162 197 Campylobacter jejuni BJ-CJD101 strain=BJ-CJD101 na latest Scaffold Major Full 2013-07-30 BJ-CJD101 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China. GCA_000440015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/015/GCF_000440015.1_BJ-CJD101/ na na na haploid bacteria 1616018 1610177 30.500000 0 9 22 NCBI RefSeq GCF_000440015.1-RS_2025_06_29 2025-06-29 1680 1586 42 na GCF_000440075.1 PRJNA224116 SAMN02469566 ALMT00000000.1 na 1214205 1307 Streptococcus suis YS49 strain=YS49 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/075/GCF_000440075.1_version1/ na na na haploid bacteria 2408260 2408260 41.500000 0 133 133 NCBI RefSeq GCF_000440075.1-RS_2025_02_21 2025-02-21 2392 2264 52 na GCF_000440095.1 PRJNA224116 SAMN02469559 ALMX00000000.1 na 1214208 1307 Streptococcus suis YS54 strain=YS54 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/095/GCF_000440095.1_version1/ na na na haploid bacteria 2314792 2314792 41.000000 0 124 124 NCBI RefSeq GCF_000440095.1-RS_2025_04_15 2025-04-15 2273 2160 45 na GCF_000440115.1 PRJNA224116 SAMN02469542 ALMY00000000.1 na 1214209 1307 Streptococcus suis YS56 strain=YS56 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/115/GCF_000440115.1_version1/ na na na haploid bacteria 2230110 2230110 41.000000 0 87 87 NCBI RefSeq GCF_000440115.1-RS_2025_02_22 2025-02-22 2217 2107 42 na GCF_000440135.1 PRJNA224116 SAMN02469548 ALMZ00000000.1 na 1214210 1307 Streptococcus suis YS57 strain=YS57 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/135/GCF_000440135.1_version1/ na na na haploid bacteria 2517911 2517911 41.000000 0 141 141 NCBI RefSeq GCF_000440135.1-RS_2025_08_25 2025-08-25 2490 2371 40 na GCF_000440155.1 PRJNA224116 SAMN02469518 ALNE00000000.1 na 1214212 1307 Streptococcus suis YS6 strain=YS6 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/155/GCF_000440155.1_version1/ na na na haploid bacteria 2038842 2038842 41.000000 0 37 37 NCBI RefSeq GCF_000440155.1-RS_2026_01_02 2026-01-02 1992 1879 54 na GCF_000440175.1 PRJNA224116 SAMN02469532 ALNF00000000.1 na 1214217 1307 Streptococcus suis YS72 strain=YS72 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/175/GCF_000440175.1_version1/ na na na haploid bacteria 2359651 2359651 41.500000 0 78 78 NCBI RefSeq GCF_000440175.1-RS_2025_02_22 2025-02-22 2296 2190 50 na GCF_000440195.1 PRJNA224116 SAMN02469549 ALNG00000000.1 na 1214218 1307 Streptococcus suis YS74 strain=YS74 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/195/GCF_000440195.1_version1/ na na na haploid bacteria 2466351 2466351 41.000000 0 136 136 NCBI RefSeq GCF_000440195.1-RS_2025_02_20 2025-02-20 2500 2352 50 na GCF_000440215.1 PRJNA224116 SAMN02470639 ALKP00000000.1 na 1214149 1307 Streptococcus suis 07SC3 strain=07SC3 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/215/GCF_000440215.1_version1/ na na na haploid bacteria 2061095 2061095 41.000000 0 33 33 NCBI RefSeq GCF_000440215.1-RS_2025_07_15 2025-07-15 2016 1914 48 na GCF_000440235.1 PRJNA224116 SAMN02470640 ALKQ00000000.1 na 1214158 1307 Streptococcus suis 10581 strain=10581 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/235/GCF_000440235.1_version1/ na na na haploid bacteria 2478160 2478160 41.000000 0 100 100 NCBI RefSeq GCF_000440235.1-RS_2025_07_20 2025-07-20 2498 2384 40 na GCF_000440255.1 PRJNA224116 SAMN02470636 ALKR00000000.1 na 1214148 1307 Streptococcus suis 11611 strain=11611 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/255/GCF_000440255.1_version1/ na na na haploid bacteria 2038930 2038930 41.000000 0 35 35 NCBI RefSeq GCF_000440255.1-RS_2026_01_03 2026-01-03 2001 1887 54 na GCF_000440275.1 PRJNA224116 SAMN02470634 ALKS00000000.1 na 1214180 1307 Streptococcus suis 11538 strain=11538 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/275/GCF_000440275.1_version1/ na na na haploid bacteria 2166271 2166271 41.000000 0 39 39 NCBI RefSeq GCF_000440275.1-RS_2025_07_15 2025-07-15 2141 2025 49 na GCF_000440295.1 PRJNA224116 SAMN02470638 ALKT00000000.1 na 1214156 1307 Streptococcus suis 12814 strain=12814 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/295/GCF_000440295.1_version1/ na na na haploid bacteria 2067501 2067501 41.000000 0 55 55 NCBI RefSeq GCF_000440295.1-RS_2025_07_15 2025-07-15 2066 1959 49 na GCF_000440315.1 PRJNA224116 SAMN02470631 ALKU00000000.1 na 1214159 1307 Streptococcus suis 13730 strain=13730 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/315/GCF_000440315.1_version1/ na na na haploid bacteria 1961245 1961245 41.500000 0 46 46 NCBI RefSeq GCF_000440315.1-RS_2025_07_15 2025-07-15 1917 1805 54 na GCF_000440335.1 PRJNA224116 SAMN02470635 ALKV00000000.1 na 1214183 1307 Streptococcus suis 14636 strain=14636 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/335/GCF_000440335.1_version1/ na na na haploid bacteria 2079568 2079568 41.000000 0 40 40 NCBI RefSeq GCF_000440335.1-RS_2025_07_15 2025-07-15 2043 1931 46 na GCF_000440355.1 PRJNA224116 SAMN02469544 ALKW00000000.1 na 1214167 1307 Streptococcus suis 14A strain=14A na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/355/GCF_000440355.1_version1/ na na na haploid bacteria 2347920 2347920 41.500000 0 120 120 NCBI RefSeq GCF_000440355.1-RS_2025_02_22 2025-02-22 2305 2192 36 na GCF_000440375.1 PRJNA224116 SAMN02469528 ALKX00000000.1 na 1214150 1307 Streptococcus suis 161_00P5 strain=161_00P5 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/375/GCF_000440375.1_version1/ na na na haploid bacteria 2267209 2267209 41.500000 0 106 106 NCBI RefSeq GCF_000440375.1-RS_2025_02_20 2025-02-20 2224 2113 39 na GCF_000440395.1 PRJNA224116 SAMN02470632 ALKY00000000.1 na 1214184 1307 Streptococcus suis 22083 strain=22083 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/395/GCF_000440395.1_version1/ na na na haploid bacteria 2024653 2024653 41.500000 0 42 42 NCBI RefSeq GCF_000440395.1-RS_2025_07_15 2025-07-15 1968 1898 42 na GCF_000440415.1 PRJNA224116 SAMN02469521 ALKZ00000000.1 na 1214181 1307 Streptococcus suis 2524 strain=2524 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/415/GCF_000440415.1_version1/ na na na haploid bacteria 1882238 1882238 41.500000 0 62 62 NCBI RefSeq GCF_000440415.1-RS_2026_01_13 2026-01-13 1835 1742 39 na GCF_000440435.1 PRJNA224116 SAMN02469522 ALLA00000000.1 na 1214154 1307 Streptococcus suis 2651 strain=2651 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/435/GCF_000440435.1_version1/ na na na haploid bacteria 1983530 1983530 41.500000 0 49 49 NCBI RefSeq GCF_000440435.1-RS_2026_01_13 2026-01-13 1980 1841 49 na GCF_000440455.1 PRJNA224116 SAMN02469550 ALLB00000000.1 na 1214161 1307 Streptococcus suis 2726 strain=2726 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/455/GCF_000440455.1_version1/ na na na haploid bacteria 2223157 2223157 41.000000 0 55 55 NCBI RefSeq GCF_000440455.1-RS_2026_01_03 2026-01-03 2202 2087 41 na GCF_000440475.1 PRJNA224116 SAMN02469534 ALLC00000000.1 na 1214155 1307 Streptococcus suis 4417 strain=4417 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/475/GCF_000440475.1_version1/ na na na haploid bacteria 2221173 2221173 41.000000 0 93 93 NCBI RefSeq GCF_000440475.1-RS_2026_01_03 2026-01-03 2199 2092 34 na GCF_000440495.1 PRJNA224116 SAMN02469551 ALLD00000000.1 na 1214176 1307 Streptococcus suis 4961 strain=4961 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/495/GCF_000440495.1_version1/ na na na haploid bacteria 2016612 2016612 41.000000 0 71 71 NCBI RefSeq GCF_000440495.1-RS_2026_01_07 2026-01-07 2041 1934 50 na GCF_000440515.1 PRJNA224116 SAMN02469535 ALLE00000000.1 na 1214179 1307 Streptococcus suis 6407 strain=6407 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/515/GCF_000440515.1_version1/ na na na haploid bacteria 2248271 2248271 41.000000 0 53 53 NCBI RefSeq GCF_000440515.1-RS_2026_01_13 2026-01-13 2251 2135 37 na GCF_000440535.1 PRJNA224116 SAMN02469536 ALLF00000000.1 na 1214182 1307 Streptococcus suis 8074 strain=8074 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/535/GCF_000440535.1_version1/ na na na haploid bacteria 2059028 2059028 41.000000 0 102 102 NCBI RefSeq GCF_000440535.1-RS_2026_01_05 2026-01-05 2068 1937 43 na GCF_000440575.1 PRJNA224116 SAMN02469523 ALLH00000000.1 na 1214157 1307 Streptococcus suis 8830 strain=8830 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/575/GCF_000440575.1_version1/ na na na haploid bacteria 2196795 2196795 41.000000 0 50 50 NCBI RefSeq GCF_000440575.1-RS_2026_01_03 2026-01-03 2192 2083 49 na GCF_000440595.1 PRJNA224116 SAMN02469524 ALLI00000000.1 na 1214151 1307 Streptococcus suis 89-1591 strain=89-1591 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/595/GCF_000440595.1_version1/ na na na haploid bacteria 2146876 2146876 41.000000 0 128 128 NCBI RefSeq GCF_000440595.1-RS_2026_01_06 2026-01-06 2204 2046 48 na GCF_000440615.1 PRJNA224116 SAMN02469552 ALLJ00000000.1 na 1214169 1307 Streptococcus suis 89-2479 strain=89-2479 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/615/GCF_000440615.1_version1/ na na na haploid bacteria 2168080 2168080 41.000000 0 48 48 NCBI RefSeq GCF_000440615.1-RS_2026_01_04 2026-01-04 2171 2038 50 na GCF_000440635.1 PRJNA224116 SAMN02469529 ALLK00000000.1 na 1214171 1307 Streptococcus suis 89-3576-3 strain=89-3576-3 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/635/GCF_000440635.1_version1/ na na na haploid bacteria 2126129 2126129 41.500000 0 69 69 NCBI RefSeq GCF_000440635.1-RS_2026_01_02 2026-01-02 2103 2010 42 na GCF_000440675.1 PRJNA224116 SAMN02469554 ALLM00000000.1 na 1214173 1307 Streptococcus suis 89-5259 strain=89-5259 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/675/GCF_000440675.1_version1/ na na na haploid bacteria 2458463 2458463 41.500000 0 141 141 NCBI RefSeq GCF_000440675.1-RS_2025_02_20 2025-02-20 2507 2346 42 na GCF_000440695.1 PRJNA224116 SAMN02469525 ALLN00000000.1 na 1214175 1307 Streptococcus suis 92-1191 strain=92-1191 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/695/GCF_000440695.1_version1/ na na na haploid bacteria 2354277 2354277 41.500000 0 165 165 NCBI RefSeq GCF_000440695.1-RS_2025_02_20 2025-02-20 2323 2180 46 na GCF_000440715.1 PRJNA224116 SAMN02469555 ALLO00000000.1 na 1214177 1307 Streptococcus suis 92-1400 strain=92-1400 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/715/GCF_000440715.1_version1/ na na na haploid bacteria 2305975 2305975 41.000000 0 78 78 NCBI RefSeq GCF_000440715.1-RS_2026_01_10 2026-01-10 2265 2124 48 na GCF_000440735.1 PRJNA224116 SAMN02469561 ALLP00000000.1 na 1214178 1307 Streptococcus suis 92-4172 strain=92-4172 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/735/GCF_000440735.1_version1/ na na na haploid bacteria 2303896 2303896 41.500000 0 102 102 NCBI RefSeq GCF_000440735.1-RS_2025_02_20 2025-02-20 2272 2166 50 na GCF_000440755.1 PRJNA224116 SAMN02469562 ALLQ00000000.1 na 1214162 1307 Streptococcus suis 93A strain=93A na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/755/GCF_000440755.1_version1/ na na na haploid bacteria 2326904 2326904 41.000000 0 168 168 NCBI RefSeq GCF_000440755.1-RS_2026_01_13 2026-01-13 2310 2137 41 na GCF_000440775.1 PRJNA224116 SAMN02469538 ALLR00000000.1 na 1214163 1307 Streptococcus suis NT77 strain=NT77 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/775/GCF_000440775.1_version1/ na na na haploid bacteria 2316308 2316308 41.000000 0 146 146 NCBI RefSeq GCF_000440775.1-RS_2026_01_11 2026-01-11 2292 2138 42 na GCF_000440795.1 PRJNA224116 SAMN02469503 ALLS00000000.1 na 1214165 1307 Streptococcus suis R735 strain=R735 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/795/GCF_000440795.1_version1/ na na na haploid bacteria 1949566 1949566 41.500000 0 41 41 NCBI RefSeq GCF_000440795.1-RS_2026_01_10 2026-01-10 1893 1789 48 na GCF_000440815.1 PRJNA224116 SAMN02469504 ALLT00000000.1 na 1214152 1307 Streptococcus suis RC1 strain=RC1 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/815/GCF_000440815.1_version1/ na na na haploid bacteria 2196433 2196433 41.000000 0 59 59 NCBI RefSeq GCF_000440815.1-RS_2026_01_04 2026-01-04 2207 2089 42 na GCF_000440835.1 PRJNA224116 SAMN02469563 ALLU00000000.1 na 1214160 1307 Streptococcus suis NCTC 10446 strain=NCTC 10446 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/835/GCF_000440835.1_version1/ na na na haploid bacteria 2014601 2014601 41.500000 0 41 41 NCBI RefSeq GCF_000440835.1-RS_2026_03_15 2026-03-15 1964 1864 49 na GCF_000440855.1 PRJNA224116 SAMN02469539 ALLV00000000.1 na 1214164 1307 Streptococcus suis 42A strain=42A na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/855/GCF_000440855.1_version1/ na na na haploid bacteria 2290077 2290077 41.000000 0 180 180 NCBI RefSeq GCF_000440855.1-RS_2026_03_15 2026-03-15 2281 2113 46 na GCF_000440895.1 PRJNA224116 SAMN02469526 ALLX00000000.1 na 1214170 1307 Streptococcus suis 88-5299A strain=88-5299A na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/895/GCF_000440895.1_version1/ na na na haploid bacteria 2333365 2333365 41.500000 0 104 104 NCBI RefSeq GCF_000440895.1-RS_2025_04_15 2025-04-15 2347 2246 41 na GCF_000440915.1 PRJNA224116 SAMN02469545 ALLY00000000.1 na 1214174 1307 Streptococcus suis 89-590 strain=89-590 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/915/GCF_000440915.1_version1/ na na na haploid bacteria 2161642 2161642 41.000000 0 69 69 NCBI RefSeq GCF_000440915.1-RS_2026_03_15 2026-03-15 2157 2051 45 na GCF_000440935.1 PRJNA224116 SAMN02469506 ALLZ00000000.1 na 1214153 1307 Streptococcus suis 5428 strain=5428 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/935/GCF_000440935.1_version1/ na na na haploid bacteria 1986468 1986468 41.500000 0 84 84 NCBI RefSeq GCF_000440935.1-RS_2026_03_15 2026-03-15 1986 1862 37 na GCF_000440955.1 PRJNA224116 SAMN02469507 ALMA00000000.1 na 1214186 1307 Streptococcus suis YS10 strain=YS10 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/955/GCF_000440955.1_version1/ na na na haploid bacteria 2220465 2220465 41.000000 0 54 54 NCBI RefSeq GCF_000440955.1-RS_2026_03_15 2026-03-15 2251 2128 46 na GCF_000440975.1 PRJNA224116 SAMN02469508 ALMB00000000.1 na 1214187 1307 Streptococcus suis YS12 strain=YS12 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/975/GCF_000440975.1_version1/ na na na haploid bacteria 2078538 2078538 41.000000 0 57 57 NCBI RefSeq GCF_000440975.1-RS_2026_01_05 2026-01-05 2059 1924 46 na GCF_000440995.1 PRJNA224116 SAMN02469540 ALMC00000000.1 na 1214188 1307 Streptococcus suis YS14 strain=YS14 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000440995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/440/995/GCF_000440995.1_version1/ na na na haploid bacteria 2171522 2171522 41.000000 0 45 45 NCBI RefSeq GCF_000440995.1-RS_2026_01_04 2026-01-04 2163 2042 44 na GCF_000441015.1 PRJNA224116 SAMN02469509 ALMD00000000.1 na 1214189 1307 Streptococcus suis YS16 strain=YS16 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/015/GCF_000441015.1_version1/ na na na haploid bacteria 2329305 2329305 41.000000 0 63 63 NCBI RefSeq GCF_000441015.1-RS_2026_02_04 2026-02-04 2304 2195 46 na GCF_000441035.1 PRJNA224116 SAMN02469556 ALME00000000.1 na 1214190 1307 Streptococcus suis YS17 strain=YS17 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/035/GCF_000441035.1_version1/ na na na haploid bacteria 2337682 2337682 41.000000 0 67 67 NCBI RefSeq GCF_000441035.1-RS_2026_03_15 2026-03-15 2307 2197 39 na GCF_000441055.1 PRJNA224116 SAMN02469557 ALMF00000000.1 na 1214191 1307 Streptococcus suis YS19 strain=YS19 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/055/GCF_000441055.1_version1/ na na na haploid bacteria 2108797 2108797 41.000000 0 60 60 NCBI RefSeq GCF_000441055.1-RS_2026_03_15 2026-03-15 2111 2007 39 na GCF_000441075.1 PRJNA224116 SAMN02469530 ALMG00000000.1 na 1214185 1307 Streptococcus suis YS1 strain=YS1 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441075.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/075/GCF_000441075.1_version1/ na na na haploid bacteria 2030247 2030247 41.500000 0 31 31 NCBI RefSeq GCF_000441075.1-RS_2026_01_02 2026-01-02 2007 1901 54 na GCF_000441095.1 PRJNA224116 SAMN02469541 ALMH00000000.1 na 1214192 1307 Streptococcus suis YS21 strain=YS21 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/095/GCF_000441095.1_version1/ na na na haploid bacteria 2468784 2468784 41.500000 0 139 139 NCBI RefSeq GCF_000441095.1-RS_2025_02_21 2025-02-21 2437 2304 50 na GCF_000441115.1 PRJNA224116 SAMN02469510 ALMI00000000.1 na 1214193 1307 Streptococcus suis YS23 strain=YS23 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/115/GCF_000441115.1_version1/ na na na haploid bacteria 2345875 2345875 41.500000 0 85 85 NCBI RefSeq GCF_000441115.1-RS_2025_04_15 2025-04-15 2269 2160 47 na GCF_000441135.1 PRJNA224116 SAMN02469511 ALMJ00000000.1 na 1214194 1307 Streptococcus suis YS24 strain=YS24 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/135/GCF_000441135.1_version1/ na na na haploid bacteria 2107121 2107121 41.000000 0 59 59 NCBI RefSeq GCF_000441135.1-RS_2026_01_03 2026-01-03 2073 1980 37 na GCF_000441155.1 PRJNA224116 SAMN02469512 ALMK00000000.1 na 1214195 1307 Streptococcus suis YS27 strain=YS27 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/155/GCF_000441155.1_version1/ na na na haploid bacteria 2425285 2425285 41.000000 0 134 134 NCBI RefSeq GCF_000441155.1-RS_2025_04_15 2025-04-15 2405 2275 41 na GCF_000441175.1 PRJNA224116 SAMN02469564 ALML00000000.1 na 1214197 1307 Streptococcus suis YS31 strain=YS31 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/175/GCF_000441175.1_version1/ na na na haploid bacteria 2227140 2227140 41.000000 0 55 55 NCBI RefSeq GCF_000441175.1-RS_2026_01_03 2026-01-03 2276 2147 54 na GCF_000441195.1 PRJNA224116 SAMN02469513 ALMM00000000.1 na 1214198 1307 Streptococcus suis YS34 strain=YS34 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441195.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/195/GCF_000441195.1_version1/ na na na haploid bacteria 2374691 2374691 41.000000 0 65 65 NCBI RefSeq GCF_000441195.1-RS_2025_02_22 2025-02-22 2346 2262 43 na GCF_000441215.1 PRJNA224116 SAMN02469514 ALMN00000000.1 na 1214199 1307 Streptococcus suis YS35 strain=YS35 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/215/GCF_000441215.1_version1/ na na na haploid bacteria 2320100 2320100 41.000000 0 68 68 NCBI RefSeq GCF_000441215.1-RS_2026_02_04 2026-02-04 2316 2219 35 na GCF_000441235.1 PRJNA224116 SAMN02469527 ALMO00000000.1 na 1214200 1307 Streptococcus suis YS39 strain=YS39 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441235.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/235/GCF_000441235.1_version1/ na na na haploid bacteria 2239881 2239881 41.000000 0 80 80 NCBI RefSeq GCF_000441235.1-RS_2026_01_13 2026-01-13 2266 2149 47 na GCF_000441255.1 PRJNA224116 SAMN02469565 ALMP00000000.1 na 1214196 1307 Streptococcus suis YS3 strain=YS3 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/255/GCF_000441255.1_version1/ na na na haploid bacteria 2169028 2169028 41.000000 0 68 68 NCBI RefSeq GCF_000441255.1-RS_2026_01_13 2026-01-13 2137 2018 40 na GCF_000441275.1 PRJNA224116 SAMN02469546 ALMQ00000000.1 na 1214202 1307 Streptococcus suis YS43 strain=YS43 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441275.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/275/GCF_000441275.1_version1/ na na na haploid bacteria 2051799 2051799 41.000000 0 67 67 NCBI RefSeq GCF_000441275.1-RS_2026_01_02 2026-01-02 2037 1939 46 na GCF_000441295.1 PRJNA224116 SAMN02469515 ALMR00000000.1 na 1214203 1307 Streptococcus suis YS44 strain=YS44 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441295.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/295/GCF_000441295.1_version1/ na na na haploid bacteria 2207162 2207162 41.000000 0 48 48 NCBI RefSeq GCF_000441295.1-RS_2026_01_03 2026-01-03 2250 2126 49 na GCF_000441315.1 PRJNA224116 SAMN02469547 ALMS00000000.1 na 1214204 1307 Streptococcus suis YS46 strain=YS46 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/315/GCF_000441315.1_version1/ na na na haploid bacteria 2426659 2426659 41.000000 0 146 146 NCBI RefSeq GCF_000441315.1-RS_2025_02_22 2025-02-22 2396 2268 38 na GCF_000441335.1 PRJNA224116 SAMN02469516 ALMU00000000.1 na 1214201 1307 Streptococcus suis YS4 strain=YS4 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441335.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/335/GCF_000441335.1_version1/ na na na haploid bacteria 2109598 2109598 41.000000 0 64 64 NCBI RefSeq GCF_000441335.1-RS_2026_01_03 2026-01-03 2121 2001 47 na GCF_000441355.1 PRJNA224116 SAMN02469519 ALMV00000000.1 na 1214206 1307 Streptococcus suis YS50 strain=YS50 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/355/GCF_000441355.1_version1/ na na na haploid bacteria 2417207 2417207 41.500000 0 122 122 NCBI RefSeq GCF_000441355.1-RS_2025_02_23 2025-02-23 2406 2279 52 na GCF_000441375.1 PRJNA224116 SAMN02469558 ALMW00000000.1 na 1214207 1307 Streptococcus suis YS53 strain=YS53 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/375/GCF_000441375.1_version1/ na na na haploid bacteria 2207429 2207429 41.000000 0 48 48 NCBI RefSeq GCF_000441375.1-RS_2026_01_04 2026-01-04 2253 2125 52 na GCF_000441395.1 PRJNA224116 SAMN02469531 ALNA00000000.1 na 1214211 1307 Streptococcus suis YS59 strain=YS59 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441395.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/395/GCF_000441395.1_version1/ na na na haploid bacteria 2200795 2200795 41.000000 0 58 58 NCBI RefSeq GCF_000441395.1-RS_2026_01_04 2026-01-04 2219 2100 43 na GCF_000441415.1 PRJNA224116 SAMN02469543 ALNB00000000.1 na 1214213 1307 Streptococcus suis YS64 strain=YS64 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/415/GCF_000441415.1_version1/ na na na haploid bacteria 2066668 2066668 41.000000 0 59 59 NCBI RefSeq GCF_000441415.1-RS_2026_01_02 2026-01-02 2040 1939 45 na GCF_000441435.1 PRJNA224116 SAMN02469560 ALNC00000000.1 na 1214214 1307 Streptococcus suis YS66 strain=YS66 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/435/GCF_000441435.1_version1/ na na na haploid bacteria 2059616 2059616 41.000000 0 40 40 NCBI RefSeq GCF_000441435.1-RS_2026_01_03 2026-01-03 2065 1951 45 na GCF_000441455.1 PRJNA224116 SAMN02469517 ALND00000000.1 na 1214215 1307 Streptococcus suis YS67 strain=YS67 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/455/GCF_000441455.1_version1/ na na na haploid bacteria 2180552 2180552 41.000000 0 47 47 NCBI RefSeq GCF_000441455.1-RS_2026_01_03 2026-01-03 2162 2040 53 na GCF_000441475.1 PRJNA224116 SAMN02469520 ALNH00000000.1 na 1214219 1307 Streptococcus suis YS77 strain=YS77 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/475/GCF_000441475.1_version1/ na na na haploid bacteria 2262250 2262250 41.500000 0 115 115 NCBI RefSeq GCF_000441475.1-RS_2025_02_23 2025-02-23 2232 2126 45 na GCF_000441495.1 PRJNA224116 SAMN02469533 ALNI00000000.1 na 1214216 1307 Streptococcus suis YS7 strain=YS7 na latest Contig Major Full 2013-07-25 version1 National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control GCA_000441495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/495/GCF_000441495.1_version1/ na na na haploid bacteria 2351085 2351085 41.500000 0 102 102 NCBI RefSeq GCF_000441495.1-RS_2025_02_23 2025-02-23 2272 2158 47 na GCF_000441535.1 PRJNA224116 SAMN02603123 na na 1076934 150055 Streptococcus lutetiensis 033 strain=033 na latest Complete Genome Major Full 2013-07-26 ASM44153v1 Chinese Center for Disease Control and Prevention GCA_000441535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/535/GCF_000441535.1_ASM44153v1/ na na na haploid bacteria 1975547 1975547 37.500000 1 1 1 NCBI RefSeq GCF_000441535.1-RS_2026_01_02 2026-01-02 2036 1824 82 23782707 GCF_000441555.1 PRJNA224116 SAMN02603760 na reference genome 669502 669502 Candidatus Profftella armatura strain=DC na latest Complete Genome Major Full 2013-07-26 ASM44155v1 RIKEN GCA_000441555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/555/GCF_000441555.1_ASM44155v1/ na na na haploid bacteria 464857 464857 24.000000 2 2 2 NCBI RefSeq GCF_000441555.1-RS_2026_03_31 2026-03-31 401 350 40 23850282 GCF_000441575.1 PRJNA224116 SAMN02603759 na na 667013 114186 Candidatus Carsonella ruddii DC strain=DC na latest Complete Genome Major Full 2013-07-26 ASM44157v1 RIKEN GCA_000441575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/575/GCF_000441575.1_ASM44157v1/ na na na haploid bacteria 174014 174014 17.500000 1 1 1 NCBI RefSeq GCF_000441575.1-RS_2026_03_21 2026-03-21 237 206 30 23850282 GCF_000441585.1 PRJNA224116 SAMN02603697 na na 907263 813 Chlamydia trachomatis RC-F/69 strain=RC-F/69 na latest Complete Genome Major Full 2013-07-26 ASM44158v1 Oregon State University GCA_000441585.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/585/GCF_000441585.1_ASM44158v1/ na na na haploid bacteria 1046087 1046087 41.500000 1 1 1 NCBI RefSeq GCF_000441585.1-RS_2025_04_26 2025-04-26 952 883 46 23786423 GCF_000441615.1 PRJNA224116 SAMN02603698 na na 907264 813 Chlamydia trachomatis RC-L2(s)/46 strain=RC-L2(s)/46 na latest Complete Genome Major Full 2013-07-26 ASM44161v1 Oregon State University GCA_000441615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/615/GCF_000441615.1_ASM44161v1/ na na na haploid bacteria 1038817 1038817 41.500000 1 1 1 NCBI RefSeq GCF_000441615.1-RS_2025_04_18 2025-04-18 947 880 46 23786423 GCF_000441635.1 PRJNA224116 SAMN02603699 na na 907265 813 Chlamydia trachomatis RC-F(s)/852 strain=RC-F(s)/852 na latest Complete Genome Major Full 2013-07-26 ASM44163v1 Oregon State University GCA_000441635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/635/GCF_000441635.1_ASM44163v1/ na na na haploid bacteria 1083893 1083893 41.500000 1 1 1 NCBI RefSeq GCF_000441635.1-RS_2025_04_18 2025-04-18 982 907 49 23786423 GCF_000441655.1 PRJNA224116 SAMN02603700 na na 907266 813 Chlamydia trachomatis RC-J/943 strain=RC-J/943 na latest Complete Genome Major Full 2013-07-26 ASM44165v1 Oregon State University GCA_000441655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/655/GCF_000441655.1_ASM44165v1/ na na na haploid bacteria 1038797 1038797 41.500000 1 1 1 NCBI RefSeq GCF_000441655.1-RS_2025_02_01 2025-02-01 947 880 46 23786423 GCF_000441675.1 PRJNA224116 SAMN02603701 na na 907267 813 Chlamydia trachomatis RC-J/953 strain=RC-J/953 na latest Complete Genome Major Full 2013-07-26 ASM44167v1 Oregon State University GCA_000441675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/675/GCF_000441675.1_ASM44167v1/ na na na haploid bacteria 1038792 1038792 41.500000 1 1 1 NCBI RefSeq GCF_000441675.1-RS_2025_04_26 2025-04-26 948 885 46 23786423 GCF_000441695.1 PRJNA224116 SAMN02603702 na na 907268 813 Chlamydia trachomatis RC-L2(s)/3 strain=RC-L2(s)/3 na latest Complete Genome Major Full 2013-07-26 ASM44169v1 Oregon State University GCA_000441695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/695/GCF_000441695.1_ASM44169v1/ na na na haploid bacteria 1046171 1046171 41.500000 1 1 1 NCBI RefSeq GCF_000441695.1-RS_2025_04_26 2025-04-26 949 880 46 23786423 GCF_000441715.1 PRJNA224116 SAMN02603703 na na 907269 813 Chlamydia trachomatis RC-F(s)/342 strain=RC-F(s)/342 na latest Complete Genome Major Full 2013-07-26 ASM44171v1 Oregon State University GCA_000441715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/715/GCF_000441715.1_ASM44171v1/ na na na haploid bacteria 1083842 1083842 41.500000 1 1 1 NCBI RefSeq GCF_000441715.1-RS_2025_04_18 2025-04-18 983 907 49 23786423 GCF_000441735.1 PRJNA224116 SAMN02603704 na na 907270 813 Chlamydia trachomatis RC-J(s)/122 strain=RC-J(s)/122 na latest Complete Genome Major Full 2013-07-26 ASM44173v1 Oregon State University GCA_000441735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/735/GCF_000441735.1_ASM44173v1/ na na na haploid bacteria 1061854 1061854 41.500000 1 1 1 NCBI RefSeq GCF_000441735.1-RS_2025_04_18 2025-04-18 968 900 46 23786423 GCF_000441755.1 PRJNA224116 SAMN02603705 na na 907271 813 Chlamydia trachomatis RC-J/966 strain=RC-J/966 na latest Complete Genome Major Full 2013-07-26 ASM44175v1 Oregon State University GCA_000441755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/755/GCF_000441755.1_ASM44175v1/ na na na haploid bacteria 1038839 1038839 41.500000 1 1 1 NCBI RefSeq GCF_000441755.1-RS_2025_02_01 2025-02-01 947 881 46 23786423 GCF_000441775.1 PRJNA224116 SAMN02603706 na na 907272 813 Chlamydia trachomatis J/6276tet1 strain=J/6276tet1 na latest Complete Genome Major Full 2013-07-26 ASM44177v1 Oregon State University GCA_000441775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/775/GCF_000441775.1_ASM44177v1/ na na na haploid bacteria 1080953 1080953 41.500000 1 1 1 NCBI RefSeq GCF_000441775.1-RS_2025_04_26 2025-04-26 980 923 49 23786423 GCF_000441795.1 PRJNA224116 SAMN02603707 na na 1007871 813 Chlamydia trachomatis RC-J/971 strain=RC-J/971 na latest Complete Genome Major Full 2013-07-26 ASM44179v1 Oregon State University GCA_000441795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/795/GCF_000441795.1_ASM44179v1/ na na na haploid bacteria 1038442 1038442 41.500000 1 1 1 NCBI RefSeq GCF_000441795.1-RS_2025_04_26 2025-04-26 947 882 46 23786423 GCF_000441815.1 PRJNA224116 SAMN02603708 na na 1007870 813 Chlamydia trachomatis RC-L2/55 strain=RC-L2/55 na latest Complete Genome Major Full 2013-07-26 ASM44181v1 Oregon State University GCA_000441815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/815/GCF_000441815.1_ASM44181v1/ na na na haploid bacteria 1038870 1038870 41.500000 1 1 1 NCBI RefSeq GCF_000441815.1-RS_2025_04_18 2025-04-18 947 881 46 23786423 GCF_000441835.1 PRJNA224116 SAMN02469374 ATRN00000000.1 na 1352932 573 Klebsiella pneumoniae LCT-KP182 strain=LCT-KP182 na latest Scaffold Major Full 2013-07-26 LCT-KP182 for vertion 2.04 of Klebsiella pneumoniae genome BGI-shenzhen GCA_000441835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/835/GCF_000441835.1_LCT-KP182_for_vertion_2.04_of_Klebsiella_pneumoniae_genome/ na na na haploid bacteria 5801744 5798488 57.000000 0 7 23 NCBI RefSeq GCF_000441835.1-RS_2025_01_05 2025-01-05 5751 5460 125 24407631 GCF_000441855.1 PRJNA224116 SAMN02469375 ATRO00000000.1 na 1352933 573 Klebsiella pneumoniae LCT-KP289 strain=LCT-KP289 na latest Scaffold Major Full 2013-07-26 LCT-KP289 for vertion 2.04 of Klebsiella pneumoniae genome BGI-shenzhen GCA_000441855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/855/GCF_000441855.1_LCT-KP289_for_vertion_2.04_of_Klebsiella_pneumoniae_genome/ na na na haploid bacteria 6068157 5822076 57.000000 0 10 426 NCBI RefSeq GCF_000441855.1-RS_2025_01_05 2025-01-05 6156 5692 125 25015528 GCF_000441955.1 PRJNA224116 SAMN02436567 AUWL00000000.1 na 1351817 470 Acinetobacter baumannii 1605 strain=1605 na latest Contig Major Full 2013-07-26 gabv01 JCVI GCA_000441955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/955/GCF_000441955.1_gabv01/ na na na haploid bacteria 3944753 3944753 39.000000 0 170 170 NCBI RefSeq GCF_000441955.1-RS_2025_05_20 2025-05-20 3835 3706 29 na GCF_000441975.1 PRJNA224116 SAMN02469667 ATLL00000000.1 na 1349821 46257 Pseudomonas avellanae CRAFRUec1 strain=CRAFRUec1 na latest Contig Major Full 2013-07-26 CLC6_0_3 CRA GCA_000441975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/441/975/GCF_000441975.1_CLC6_0_3/ na na na haploid bacteria 5736089 5736089 59.000000 0 547 547 NCBI RefSeq GCF_000441975.1-RS_2025_08_01 2025-08-01 5337 4980 33 24086635 GCF_000442045.1 PRJNA224116 SAMN02471500 AUWX00000000.1 na 1303769 1352 Enterococcus faecium E155 strain=E155 na latest Contig Major Full 2013-07-29 EfmE155_v1.0 Department of Medical Microbiology, University Medical Center Utrecht GCA_000442045.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/045/GCF_000442045.1_EfmE155_v1.0/ na na na haploid bacteria 3066426 3066426 38.000000 0 495 495 NCBI RefSeq GCF_000442045.1-RS_2026_01_14 2026-01-14 3174 2998 43 23882129 GCF_000442065.2 PRJNA224116 SAMN02435804 ASZR00000000.1 na 1336205 562 Escherichia coli O127:H6 str. E2348/69 substr. CVDNalr strain=E2348/69 substr. CVDNalr na latest Contig Minor Full 2013-07-29 Escherichia coli O127:H6 str. E2348/69 substr. CVDNalr Institute for Genome Sciences GCA_000442065.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/065/GCF_000442065.2_Escherichia_coli_O127_H6_str._E2348_69_substr._CVDNalr/ na na na haploid bacteria 4940841 4940841 50.500000 0 127 127 NCBI RefSeq GCF_000442065.2-RS_2025_06_09 2025-06-09 5030 4662 85 23913321 GCF_000442085.2 PRJNA224116 SAMN02435803 ASZS00000000.1 na 1336206 562 Escherichia coli O127:H6 str. E2348/69 substr. UMD753 strain=E2348/69 substr. UMD753 na latest Contig Minor Full 2013-07-29 Escherichia coli O127:H6 str. E2348/69 substr. UMD753 Institute for Genome Sciences GCA_000442085.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/085/GCF_000442085.2_Escherichia_coli_O127_H6_str._E2348_69_substr._UMD753/ na na na haploid bacteria 4941135 4941135 50.500000 0 130 130 NCBI RefSeq GCF_000442085.2-RS_2025_06_09 2025-06-09 5038 4661 85 23913321 GCF_000442155.1 PRJNA224116 SAMN02469816 ASWZ00000000.1 na 1333864 1303 Streptococcus oralis subsp. tigurinus 2425 strain=2425 na latest Contig Major Full 2013-07-31 2425.1 Geneva University Hospitals, Genomic Research Laboratory GCA_000442155.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/155/GCF_000442155.1_2425.1/ na na na haploid bacteria 1871835 1871835 41.000000 0 15 15 NCBI RefSeq GCF_000442155.1-RS_2025_04_26 2025-04-26 1897 1767 61 24478475 GCF_000442175.1 PRJNA224116 SAMN02469815 ASXA00000000.1 na 1333865 1303 Streptococcus oralis subsp. tigurinus 2426 strain=2426 na latest Contig Major Full 2013-07-31 2426.1 Geneva University Hospitals, Genomic Research Laboratory GCA_000442175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/175/GCF_000442175.1_2426.1/ na na na haploid bacteria 1882877 1882877 41.000000 1 25 25 NCBI RefSeq GCF_000442175.1-RS_2025_03_23 2025-03-23 1908 1775 63 24478475 GCF_000442255.1 PRJNA224116 SAMN02469746 APVH00000000.1 reference genome 1123237 263378 Salipiger mucosus DSM 16094 strain=DSM 16094 na latest Scaffold Major Full 2013-07-31 Salmuc Leibniz Institute DSMZ Braunschweig GCA_000442255.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/255/GCF_000442255.1_Salmuc/ na assembly from type material na haploid bacteria 5689389 5671487 67.500000 0 30 84 NCBI RefSeq GCF_000442255.1-RS_2026_05_02 2026-05-02 5763 5457 90 na GCF_000442275.2 PRJNA224116 SAMN02469745 AONI00000000.1 reference genome 1123360 491388 Litoreibacter arenae DSM 19593 strain=DSM 19593 na latest Scaffold Minor Full 2013-07-31 Thalar Roseobacter SFB GCA_000442275.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/275/GCF_000442275.2_Thalar/ na assembly from type material na haploid bacteria 3682761 3682324 60.500000 0 14 17 NCBI RefSeq GCF_000442275.2-RS_2025_12_09 2025-12-09 3648 3548 50 na GCF_000442315.1 PRJNA224116 SAMN02469744 AOLV00000000.1 reference genome 1123069 295419 Rubellimicrobium thermophilum DSM 16684 strain=DSM 16684 na latest Scaffold Major Full 2013-07-31 Ruthe Roseobacter SFB GCA_000442315.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/315/GCF_000442315.1_Ruthe/ na assembly from type material na haploid bacteria 3163144 3159235 69.000000 0 10 43 NCBI RefSeq GCF_000442315.1-RS_2026_05_02 2026-05-02 3216 2735 45 24501632 GCF_000442355.1 PRJNA224116 SAMN02179359 ASZO00000000.1 na 1336252 1280 Staphylococcus aureus SA16 strain=SA16 na latest Contig Major Full 2013-07-31 SA16 genome assembly University of Sao Paulo GCA_000442355.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/355/GCF_000442355.1_SA16_genome_assembly/ na na na haploid bacteria 2961555 2961555 33.000000 0 74 74 NCBI RefSeq GCF_000442355.1-RS_2025_09_07 2025-09-07 3021 2823 81 24051324 GCF_000442375.1 PRJNA224116 SAMN02469362 ATJX00000000.1 na 1348337 615 Serratia marcescens LCT-SM262 strain=LCT-SM262 na latest Scaffold Major Full 2013-07-31 S.marcescens_LCT-SM262 BGI GCA_000442375.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/375/GCF_000442375.1_S.marcescens_LCT-SM262/ na na na haploid bacteria 5160155 4861156 59.500000 0 55 559 NCBI RefSeq GCF_000442375.1-RS_2026_01_13 2026-01-13 5136 4775 92 na GCF_000442415.1 PRJNA224116 SAMN02297856 na na 877468 28901 Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 strain=USMARC-S3124.1 na latest Complete Genome Major Full 2013-07-31 ASM44241v1 USMARC-ARS-USDA GCA_000442415.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/415/GCF_000442415.1_ASM44241v1/ na na na haploid bacteria 4915960 4915960 52.000000 1 1 1 NCBI RefSeq GCF_000442415.1-RS_2025_08_15 2025-08-15 4860 4592 124 na GCF_000442435.1 PRJNA224116 SAMN02603105 na na 1328306 29449 Rhizobium etli bv. mimosae str. Mim1 strain=Mim1 na latest Complete Genome Major Full 2013-07-31 ASM44243v1 Centro de Ciencias Genomicas UNAM GCA_000442435.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/435/GCF_000442435.1_ASM44243v1/ na na na haploid bacteria 7197998 7197998 61.000000 7 7 7 NCBI RefSeq GCF_000442435.1-RS_2026_04_29 2026-04-29 6927 6568 64 na GCF_000442455.1 PRJNA224116 SAMN02469358 ATJW00000000.1 na 1348336 615 Serratia marcescens LCT-SM166 strain=LCT-SM166 na latest Scaffold Major Full 2013-07-31 S.marcescens_LCT-SM166 BGI GCA_000442455.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/455/GCF_000442455.1_S.marcescens_LCT-SM166/ na na na haploid bacteria 5070021 5019077 59.500000 0 13 47 NCBI RefSeq GCF_000442455.1-RS_2025_12_30 2025-12-30 4800 4669 86 24526644 GCF_000442475.1 PRJNA224116 SAMN02469851 ASZV00000000.1 na 1235457 1235457 Ralstonia sp. AU12-08 strain=AU12-08 na latest Contig Major Full 2013-07-31 ASM44247v1 Griffith University GCA_000442475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/475/GCF_000442475.1_ASM44247v1/ na na na haploid bacteria 6229152 6229152 63.500000 0 78 78 NCBI RefSeq GCF_000442475.1-RS_2025_08_24 2025-08-24 5870 5743 53 24503988 GCF_000442515.1 PRJNA224116 SAMN02469434 AQPH00000000.1 na 1316936 1082 Magnetospirillum fulvum MGU-K5 strain=MGU-K5 na latest Contig Major Full 2013-07-31 PhaespirillumFulvum_1.0 Centre Bioengineering RAS GCA_000442515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/515/GCF_000442515.1_PhaespirillumFulvum_1.0/ na na na haploid bacteria 3769403 3769403 64.000000 0 178 178 NCBI RefSeq GCF_000442515.1-RS_2026_02_08 2026-02-08 3600 3473 54 na GCF_000442535.1 PRJNA224116 SAMN01816162 ATMS00000000.1 na 1117109 44250 Paenibacillus alvei A6-6i-x strain=A6-6i-x na latest Contig Major Full 2013-07-31 CFSAN001085_1.0 FDA GCA_000442535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/535/GCF_000442535.1_CFSAN001085_1.0/ na na na haploid bacteria 6478182 6478182 46.500000 0 90 90 NCBI RefSeq GCF_000442535.1-RS_2025_02_10 2025-02-10 5862 5650 92 23990585 GCF_000442555.1 PRJNA224116 SAMN01816161 ATMT00000000.1 na 1117108 44250 Paenibacillus alvei TS-15 strain=TS-15 na latest Contig Major Full 2013-07-31 CFSAN001086_1.0 FDA GCA_000442555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/555/GCF_000442555.1_CFSAN001086_1.0/ na na na haploid bacteria 6709780 6709780 46.500000 0 108 108 NCBI RefSeq GCF_000442555.1-RS_2025_04_26 2025-04-26 6010 5808 86 23990585 GCF_000442595.1 PRJNA224116 SAMN02603046 na na 1198232 1329899 Cycloclasticus zancles 78-ME strain=78-ME na latest Complete Genome Major Full 2013-08-01 ASM44259v1 C.N.R. - Institute for Coastal Marine Environment GCA_000442595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/595/GCF_000442595.1_ASM44259v1/ na na na haploid bacteria 2655425 2655425 42.000000 2 2 2 NCBI RefSeq GCF_000442595.1-RS_2025_03_23 2025-03-23 2579 2517 43 27345842 GCF_000442645.1 PRJNA224116 SAMN02603057 na reference genome 1224163 575200 Corynebacterium maris DSM 45190 strain=DSM 45190 na latest Complete Genome Major Full 2013-08-01 ASM44264v1 CeBiTec, Bielefeld University GCA_000442645.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/645/GCF_000442645.1_ASM44264v1/ na assembly from type material na haploid bacteria 2833547 2833547 66.500000 2 2 2 NCBI RefSeq GCF_000442645.1-RS_2025_11_23 2025-11-23 2679 2583 69 24501635 GCF_000442795.1 PRJNA224116 SAMN02471068 ANNN00000000.1 na 1266446 1773 Mycobacterium tuberculosis PanR0704 strain=PanR0704 na latest Chromosome Major Full 2013-08-06 fedora0704i_IS Texas A&M University GCA_000442795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/795/GCF_000442795.1_fedora0704i_IS/ na na na haploid bacteria 4398504 4380665 65.500000 1 1 67 NCBI RefSeq GCF_000442795.1-RS_2025_06_28 2025-06-28 4196 3925 51 23884993 GCF_000442825.1 PRJNA224116 SAMEA2272474 CBLT000000000.1 na 1226679 1579 Lactobacillus acidophilus DSM 20242 strain=DSM 20242 na latest Contig Major Full 2013-07-12 LaDSM20242V1 INRA STLO GCA_000442825.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/825/GCF_000442825.1_LaDSM20242V1/ na na na haploid bacteria 2047860 2047860 34.500000 0 21 21 NCBI RefSeq GCF_000442825.1-RS_2026_01_30 2026-01-30 1971 1826 72 na GCF_000442845.1 PRJNA224116 SAMEA3138808 CBLU000000000.1 na 1137134 1358 Lactococcus lactis subsp. lactis A12 strain=A12 na latest Contig Major Full 2013-07-17 LLA12V1 LMGM du CNRS GCA_000442845.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/845/GCF_000442845.1_LLA12V1/ na na na haploid bacteria 2700005 2700005 35.500000 0 42 42 NCBI RefSeq GCF_000442845.1-RS_2026_01_30 2026-01-30 2746 2521 71 23872564 GCF_000442865.1 PRJNA224116 SAMEA2272381 CBLP000000000.1 na 1226677 1579 Lactobacillus acidophilus CIRM-BIA 442 strain=CIRM-BIA 442 na latest Contig Major Full 2013-07-12 LaCIRM442V1 INRA STLO GCA_000442865.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/865/GCF_000442865.1_LaCIRM442V1/ na na na haploid bacteria 1986992 1986992 34.500000 0 19 19 NCBI RefSeq GCF_000442865.1-RS_2026_01_30 2026-01-30 1928 1794 71 na GCF_000442905.1 PRJNA224116 SAMEA2272596 CBMK000000000.1 na 1351754 728 Avibacterium paragallinarum JF4211 strain=JF4211 na latest Contig Major Full 2013-07-15 AviparaA_JF4211 SIB GCA_000442905.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/905/GCF_000442905.1_AviparaA_JF4211/ na na na haploid bacteria 2869246 2869246 41.000000 0 34 34 NCBI RefSeq GCF_000442905.1-RS_2026_04_23 2026-04-23 3113 2796 79 na GCF_000442925.1 PRJNA224116 SAMEA2272100 CAUO00000000.1 na 1300145 669 Vibrio harveyi VHJR7 strain=VHJR7 na latest Contig Major Full 2013-05-06 VHJR7_1 UMS GCA_000442925.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/925/GCF_000442925.1_VHJR7_1/ na na na haploid bacteria 5918874 5918874 45.000000 0 70 70 NCBI RefSeq GCF_000442925.1-RS_2026_01_30 2026-01-30 5459 5306 108 na GCF_000442945.1 PRJNA224116 SAMN02471069 ANZG00000000.1 na 1262525 1773 Mycobacterium tuberculosis PanR0201 strain=PanR0201 na latest Chromosome Major Full 2013-08-06 fedora0201c_IS Texas A&M University GCA_000442945.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/945/GCF_000442945.1_fedora0201c_IS/ na na na haploid bacteria 4402571 4368124 65.500000 1 1 97 NCBI RefSeq GCF_000442945.1-RS_2025_06_29 2025-06-29 4225 3945 51 23884993 GCF_000442965.1 PRJNA224116 SAMN02471108 ANZH00000000.1 na 1262526 1773 Mycobacterium tuberculosis PanR0802 strain=PanR0802 na latest Chromosome Major Full 2013-08-06 fedora0802c_IS Texas A&M University GCA_000442965.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/965/GCF_000442965.1_fedora0802c_IS/ na na na haploid bacteria 4408178 4376248 65.500000 1 1 79 NCBI RefSeq GCF_000442965.1-RS_2025_06_28 2025-06-28 4210 3938 51 23884993 GCF_000442985.1 PRJNA224116 SAMN02472044 APJV00000000.1 na 1300224 358 Agrobacterium fabacearum P4 strain=P4 na latest Chromosome Major Full 2013-10-28 AtP4V1.0 Institut des Sciences du vegetal GCA_000442985.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/442/985/GCF_000442985.1_AtP4V1.0/ na na na haploid bacteria 5570940 5568029 58.500000 3 3 9 NCBI RefSeq GCF_000442985.1-RS_2026_01_02 2026-01-02 5278 5140 73 24092790 GCF_000443005.1 PRJNA224116 SAMN02471042 ANZI00000000.1 na 1262529 1773 Mycobacterium tuberculosis PanR1005 strain=PanR1005 na latest Chromosome Major Full 2013-08-06 fedora1005_IS Texas A&M University GCA_000443005.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/005/GCF_000443005.1_fedora1005_IS/ na na na haploid bacteria 4408147 4351599 65.500000 1 1 87 NCBI RefSeq GCF_000443005.1-RS_2025_06_29 2025-06-29 4183 3924 47 23884993 GCF_000443085.1 PRJNA224116 SAMN02116555 AUNK00000000.1 na 1329905 75985 Mannheimia haemolytica D35 strain=D35 D35 latest Contig Major Full 2013-08-02 MhD35v2 National Animal Disease Center GCA_000443085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/085/GCF_000443085.1_MhD35v2/ na na na haploid bacteria 2491444 2491444 41.500000 0 123 123 NCBI RefSeq GCF_000443085.1-RS_2025_12_27 2025-12-27 2557 2356 69 25767233 GCF_000443105.1 PRJNA224116 SAMN02116556 AUNL00000000.1 na 1329906 75985 Mannheimia haemolytica D38 strain=D38 D38 latest Contig Major Full 2013-08-02 MhD38v2 National Animal Disease Center GCA_000443105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/105/GCF_000443105.1_MhD38v2/ na na na haploid bacteria 2611675 2611675 41.000000 0 97 97 NCBI RefSeq GCF_000443105.1-RS_2025_08_05 2025-08-05 2739 2551 60 25745008 GCF_000443125.1 PRJNA224116 SAMN02469810 AUPV00000000.1 na 1344580 1280 Staphylococcus aureus S100 strain=S100 na latest Contig Major Full 2013-08-02 S100v1 Geneva University Hospitals, Genomic Research Laboratory. GCA_000443125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/125/GCF_000443125.1_S100v1/ na na na haploid bacteria 2742738 2742738 33.000000 0 43 43 NCBI RefSeq GCF_000443125.1-RS_2025_04_19 2025-04-19 2760 2584 84 23770143 GCF_000443145.1 PRJNA224116 SAMN02222088 AUMY00000000.1 na 1353275 36809 Mycobacteroides abscessus V06705 strain=V06705 na latest Scaffold Major Full 2013-08-02 V06705 Universite Pierre et Marie CURIE GCA_000443145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/145/GCF_000443145.1_V06705/ na na na haploid bacteria 5268718 5268454 64.000000 0 90 109 NCBI RefSeq GCF_000443145.1-RS_2025_08_05 2025-08-05 5290 5132 53 24009121 GCF_000443165.1 PRJNA224116 SAMN02210755 ATJV00000000.1 reference genome 1348657 76113 Thauera terpenica 58Eu strain=58Eu na latest Contig Major Full 2013-08-02 TT Norwegian University of Life Sciences GCA_000443165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/165/GCF_000443165.1_TT/ na assembly from type material na haploid bacteria 4145786 4145786 64.500000 0 135 135 NCBI RefSeq GCF_000443165.1-RS_2025_08_20 2025-08-20 3885 3781 62 na GCF_000443185.1 PRJNA224116 SAMN02116557 ATTA00000000.1 na 1329903 75985 Mannheimia haemolytica MhSwine2000 strain=MhSwine2000 MhSwine2000 latest Contig Major Full 2013-08-02 MhSwine2000v2 National Animal Disease Center GCA_000443185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/185/GCF_000443185.1_MhSwine2000v2/ na na na haploid bacteria 2708570 2708570 41.000000 0 74 74 NCBI RefSeq GCF_000443185.1-RS_2026_04_26 2026-04-26 2857 2669 73 na GCF_000443205.1 PRJNA224116 SAMN02116545 ATSY00000000.1 na 1329904 75985 Mannheimia haemolytica D193 strain=D193 D193 latest Contig Major Full 2013-08-02 MhD193v2 National Animal Disease Center GCA_000443205.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/205/GCF_000443205.1_MhD193v2/ na na na haploid bacteria 2680535 2680535 41.000000 0 50 50 NCBI RefSeq GCF_000443205.1-RS_2026_02_02 2026-02-02 2805 2629 77 24136851 GCF_000443225.1 PRJNA224116 SAMN02116558 ATSZ00000000.1 na 1329902 75985 Mannheimia haemolytica MhBrain2012 strain=MhBrain2012 MhBrain2012 latest Contig Major Full 2013-08-02 MhBrainv2 National Animal Disease Center GCA_000443225.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/225/GCF_000443225.1_MhBrainv2/ na na na haploid bacteria 2727199 2727199 41.000000 0 32 32 NCBI RefSeq GCF_000443225.1-RS_2026_04_26 2026-04-26 2852 2641 92 na GCF_000443245.1 PRJNA224116 SAMN02469812 AUPT00000000.1 na 1344578 1280 Staphylococcus aureus S130 strain=S130 na latest Contig Major Full 2013-08-02 S130v1 Geneva University Hospitals, Genomic Research Laboratory. GCA_000443245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/245/GCF_000443245.1_S130v1/ na na na haploid bacteria 2783607 2783607 33.000000 1 42 42 NCBI RefSeq GCF_000443245.1-RS_2025_04_15 2025-04-15 2796 2617 80 23770143 GCF_000443265.1 PRJNA224116 SAMN02469811 AUPU00000000.1 na 1344579 1280 Staphylococcus aureus S123 strain=S123 na latest Contig Major Full 2013-08-02 S123v1 Geneva University Hospitals, Genomic Research Laboratory. GCA_000443265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/265/GCF_000443265.1_S123v1/ na na na haploid bacteria 2700799 2700799 33.000000 2 49 49 NCBI RefSeq GCF_000443265.1-RS_2025_04_18 2025-04-18 2691 2520 82 23770143 GCF_000443285.1 PRJNA224116 SAMN02469813 AUPW00000000.1 na 1344581 1280 Staphylococcus aureus S94 strain=S94 na latest Contig Major Full 2013-08-02 S94v1 Geneva University Hospitals, Genomic Research Laboratory. GCA_000443285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/285/GCF_000443285.1_S94v1/ na na na haploid bacteria 2685142 2685142 33.000000 1 54 54 NCBI RefSeq GCF_000443285.1-RS_2025_02_01 2025-02-01 2698 2523 87 23770143 GCF_000443305.1 PRJNA224116 SAMN02471063 ATML00000000.1 na 1344043 1773 Mycobacterium tuberculosis PanR0203 strain=PanR0203 na latest Chromosome Major Full 2013-08-08 fedora0203c_IS Texas A&M University GCA_000443305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/305/GCF_000443305.1_fedora0203c_IS/ na na na haploid bacteria 4397671 4357938 65.500000 1 1 110 NCBI RefSeq GCF_000443305.1-RS_2025_06_28 2025-06-28 4226 3944 51 23884993 GCF_000443325.1 PRJNA224116 SAMN02471103 ATMM00000000.1 na 1344044 1773 Mycobacterium tuberculosis PanR0205 strain=PanR0205 na latest Chromosome Major Full 2013-08-08 fedora0205e_IS Texas A&M University GCA_000443325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/325/GCF_000443325.1_fedora0205e_IS/ na na na haploid bacteria 4408813 4350365 65.500000 1 1 131 NCBI RefSeq GCF_000443325.1-RS_2025_06_29 2025-06-29 4252 3957 51 23884993 GCF_000443345.1 PRJNA224116 SAMN02471113 ATMN00000000.1 na 1344045 1773 Mycobacterium tuberculosis PanR0206 strain=PanR0206 na latest Chromosome Major Full 2013-08-08 fedora0206b_IS Texas A&M University GCA_000443345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/345/GCF_000443345.1_fedora0206b_IS/ na na na haploid bacteria 4404319 4380333 65.500000 1 1 71 NCBI RefSeq GCF_000443345.1-RS_2025_06_29 2025-06-29 4197 3931 51 23884993 GCF_000443365.1 PRJNA224116 SAMN02471064 ATMO00000000.1 na 1344047 1773 Mycobacterium tuberculosis PanR0208 strain=PanR0208 na latest Chromosome Major Full 2013-08-08 fedora0208e_IS Texas A&M University GCA_000443365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/365/GCF_000443365.1_fedora0208e_IS/ na na na haploid bacteria 4393994 4329156 65.500000 1 1 157 NCBI RefSeq GCF_000443365.1-RS_2025_06_29 2025-06-29 4248 3946 51 23884993 GCF_000443405.1 PRJNA224116 SAMN02471079 ATMP00000000.1 na 1344048 1773 Mycobacterium tuberculosis PanR0209 strain=PanR0209 na latest Chromosome Major Full 2013-08-08 fedora0209_IS Texas A&M University GCA_000443405.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/405/GCF_000443405.1_fedora0209_IS/ na na na haploid bacteria 4408133 4390965 65.500000 1 1 53 NCBI RefSeq GCF_000443405.1-RS_2025_06_29 2025-06-29 4189 3926 51 23884993 GCF_000443425.1 PRJNA224116 SAMN02471065 ATMQ00000000.1 na 1344046 1773 Mycobacterium tuberculosis PanR0207 strain=PanR0207 na latest Chromosome Major Full 2013-08-08 fedora0207g_IS Texas A&M University GCA_000443425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/425/GCF_000443425.1_fedora0207g_IS/ na na na haploid bacteria 4398802 4369803 65.500000 1 1 74 NCBI RefSeq GCF_000443425.1-RS_2025_06_28 2025-06-28 4196 3923 51 23884993 GCF_000443445.1 PRJNA224116 SAMN02471067 ATDX00000000.1 na 1346765 1773 Mycobacterium tuberculosis PanR0412 strain=PanR0412 na latest Chromosome Major Full 2013-08-08 fedora0412_IS Texas A&M University GCA_000443445.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/445/GCF_000443445.1_fedora0412_IS/ na na na haploid bacteria 4393218 4368064 65.500000 1 1 88 NCBI RefSeq GCF_000443445.1-RS_2025_06_29 2025-06-29 4215 3941 51 23884993 GCF_000443465.1 PRJNA224116 SAMN02471081 ATDZ00000000.1 na 1346767 1773 Mycobacterium tuberculosis PanR0410 strain=PanR0410 na latest Chromosome Major Full 2013-08-08 fedora0410_IS Texas A&M University GCA_000443465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/465/GCF_000443465.1_fedora0410_IS/ na na na haploid bacteria 4404835 4376464 65.500000 1 1 69 NCBI RefSeq GCF_000443465.1-RS_2025_06_29 2025-06-29 4196 3927 51 23884993 GCF_000443485.1 PRJNA224116 SAMN02471104 ATDY00000000.1 na 1346766 1773 Mycobacterium tuberculosis PanR0411 strain=PanR0411 na latest Chromosome Major Full 2013-08-08 fedora0411_IS Texas A&M University GCA_000443485.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/485/GCF_000443485.1_fedora0411_IS/ na na na haploid bacteria 4404586 4374719 65.500000 1 1 71 NCBI RefSeq GCF_000443485.1-RS_2025_06_28 2025-06-28 4196 3934 51 23884993 GCF_000443505.1 PRJNA224116 SAMN02471070 ATEA00000000.1 na 1346768 1773 Mycobacterium tuberculosis PanR0409 strain=PanR0409 na latest Chromosome Major Full 2013-08-08 fedora0409_IS Texas A&M University GCA_000443505.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/505/GCF_000443505.1_fedora0409_IS/ na na na haploid bacteria 4402591 4371953 65.500000 1 1 102 NCBI RefSeq GCF_000443505.1-RS_2025_06_29 2025-06-29 4227 3952 51 23884993 GCF_000443525.1 PRJNA224116 SAMN02471043 ATEB00000000.1 na 1346770 1773 Mycobacterium tuberculosis PanR0407 strain=PanR0407 na latest Chromosome Major Full 2013-08-08 fedora0407b_IS Texas A&M University GCA_000443525.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/525/GCF_000443525.1_fedora0407b_IS/ na na na haploid bacteria 4405148 4278358 65.500000 1 1 487 NCBI RefSeq GCF_000443525.1-RS_2025_06_28 2025-06-28 4522 4047 51 23884993 GCF_000443545.1 PRJNA224116 SAMN02471044 ATEC00000000.1 na 1346771 1773 Mycobacterium tuberculosis PanR0405 strain=PanR0405 na latest Chromosome Major Full 2013-08-08 fedora0405c_IS Texas A&M University GCA_000443545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/545/GCF_000443545.1_fedora0405c_IS/ na na na haploid bacteria 4403568 4399405 65.500000 1 1 73 NCBI RefSeq GCF_000443545.1-RS_2025_06_29 2025-06-29 4223 3959 51 23884993 GCF_000443575.1 PRJNA224116 SAMN02471093 ATED00000000.1 na 1346772 1773 Mycobacterium tuberculosis PanR0404 strain=PanR0404 na latest Chromosome Major Full 2013-08-08 fedora0404_IS Texas A&M University GCA_000443575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/575/GCF_000443575.1_fedora0404_IS/ na na na haploid bacteria 4404247 4338019 65.500000 1 1 134 NCBI RefSeq GCF_000443575.1-RS_2025_06_29 2025-06-29 4241 3948 51 23884993 GCF_000443595.1 PRJNA224116 SAMN02471082 ATEE00000000.1 na 1346773 1773 Mycobacterium tuberculosis PanR0403 strain=PanR0403 na latest Chromosome Major Full 2013-08-08 fedora0403_IS Texas A&M University GCA_000443595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/595/GCF_000443595.1_fedora0403_IS/ na na na haploid bacteria 4400856 4343389 65.500000 1 1 131 NCBI RefSeq GCF_000443595.1-RS_2025_06_29 2025-06-29 4246 3954 51 23884993 GCF_000443615.1 PRJNA224116 SAMN02471045 ATEF00000000.1 na 1346774 1773 Mycobacterium tuberculosis PanR0402 strain=PanR0402 na latest Chromosome Major Full 2013-08-08 fedora0402_IS Texas A&M University GCA_000443615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/615/GCF_000443615.1_fedora0402_IS/ na na na haploid bacteria 4412421 4375184 65.500000 1 1 129 NCBI RefSeq GCF_000443615.1-RS_2025_06_28 2025-06-28 4267 3973 51 23884993 GCF_000443635.1 PRJNA224116 SAMN02471071 ATEG00000000.1 na 1346775 1773 Mycobacterium tuberculosis PanR0401 strain=PanR0401 na latest Chromosome Major Full 2013-08-08 fedora0401c_IS Texas A&M University GCA_000443635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/635/GCF_000443635.1_fedora0401c_IS/ na na na haploid bacteria 4407862 4327979 65.500000 1 1 237 NCBI RefSeq GCF_000443635.1-RS_2025_06_29 2025-06-29 4328 3964 51 23884993 GCF_000443655.1 PRJNA224116 SAMN02471083 ATEH00000000.1 na 1346776 1773 Mycobacterium tuberculosis PanR0317 strain=PanR0317 na latest Chromosome Major Full 2013-08-08 fedora0317b_IS Texas A&M University GCA_000443655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/655/GCF_000443655.1_fedora0317b_IS/ na na na haploid bacteria 4392448 4289623 65.500000 1 1 309 NCBI RefSeq GCF_000443655.1-RS_2025_06_29 2025-06-29 4360 3985 51 23884993 GCF_000443675.1 PRJNA224116 SAMN02471066 ATEI00000000.1 na 1346777 1773 Mycobacterium tuberculosis PanR0316 strain=PanR0316 na latest Chromosome Major Full 2013-08-08 fedora0316c_IS Texas A&M University GCA_000443675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/675/GCF_000443675.1_fedora0316c_IS/ na na na haploid bacteria 4394000 4365230 65.500000 1 1 110 NCBI RefSeq GCF_000443675.1-RS_2025_06_29 2025-06-29 4239 3967 51 23884993 GCF_000443695.1 PRJNA224116 SAMN02471046 ATEJ00000000.1 na 1346778 1773 Mycobacterium tuberculosis PanR0315 strain=PanR0315 na latest Chromosome Major Full 2013-08-08 fedora0315_IS Texas A&M University GCA_000443695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/695/GCF_000443695.1_fedora0315_IS/ na na na haploid bacteria 4403042 4316273 65.500000 1 1 237 NCBI RefSeq GCF_000443695.1-RS_2025_06_29 2025-06-29 4323 3971 51 23884993 GCF_000443715.1 PRJNA224116 SAMN02471109 ATEK00000000.1 na 1346779 1773 Mycobacterium tuberculosis PanR0314 strain=PanR0314 na latest Chromosome Major Full 2013-08-08 fedora0314e_IS Texas A&M University GCA_000443715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/715/GCF_000443715.1_fedora0314e_IS/ na na na haploid bacteria 4392414 4374359 65.500000 1 1 76 NCBI RefSeq GCF_000443715.1-RS_2025_06_29 2025-06-29 4213 3932 51 23884993 GCF_000443755.1 PRJNA224116 SAMN02471091 ATEN00000000.1 na 1346782 1773 Mycobacterium tuberculosis PanR0309 strain=PanR0309 na latest Chromosome Major Full 2013-08-08 fedora0309c_IS Texas A&M University GCA_000443755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/755/GCF_000443755.1_fedora0309c_IS/ na na na haploid bacteria 4390137 4364364 65.500000 1 1 43 NCBI RefSeq GCF_000443755.1-RS_2025_06_29 2025-06-29 4153 3909 51 23884993 GCF_000443795.1 PRJNA224116 SAMN02471105 ATEL00000000.1 na 1346780 1773 Mycobacterium tuberculosis PanR0313 strain=PanR0313 na latest Chromosome Major Full 2013-08-08 fedora0313c_IS Texas A&M University GCA_000443795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/795/GCF_000443795.1_fedora0313c_IS/ na na na haploid bacteria 4401613 4381667 65.500000 1 1 49 NCBI RefSeq GCF_000443795.1-RS_2025_06_29 2025-06-29 4182 3929 51 23884993 GCF_000443815.1 PRJNA224116 SAMN02471047 ATEO00000000.1 na 1346783 1773 Mycobacterium tuberculosis PanR0308 strain=PanR0308 na latest Chromosome Major Full 2013-08-08 fedora0308g_IS Texas A&M University GCA_000443815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/815/GCF_000443815.1_fedora0308g_IS/ na na na haploid bacteria 4391527 4376493 65.500000 1 1 85 NCBI RefSeq GCF_000443815.1-RS_2025_06_29 2025-06-29 4209 3933 51 23884993 GCF_000443835.1 PRJNA224116 SAMN02471080 ATEP00000000.1 na 1346784 1773 Mycobacterium tuberculosis PanR0307 strain=PanR0307 na latest Chromosome Major Full 2013-08-08 fedora0307c_IS Texas A&M University GCA_000443835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/835/GCF_000443835.1_fedora0307c_IS/ na na na haploid bacteria 4403994 4377153 65.500000 1 1 153 NCBI RefSeq GCF_000443835.1-RS_2025_06_29 2025-06-29 4276 3967 51 23884993 GCF_000443855.1 PRJNA224116 SAMN02471048 ATEQ00000000.1 na 1346785 1773 Mycobacterium tuberculosis PanR0306 strain=PanR0306 na latest Chromosome Major Full 2013-08-08 fedora0306b_IS Texas A&M University GCA_000443855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/855/GCF_000443855.1_fedora0306b_IS/ na na na haploid bacteria 4402981 4329339 65.500000 1 1 186 NCBI RefSeq GCF_000443855.1-RS_2025_02_24 2025-02-24 4279 3951 51 23884993 GCF_000443875.1 PRJNA224116 SAMN02471110 ATES00000000.1 na 1346787 1773 Mycobacterium tuberculosis PanR0304 strain=PanR0304 na latest Chromosome Major Full 2013-08-08 fedora0304b_IS Texas A&M University GCA_000443875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/875/GCF_000443875.1_fedora0304b_IS/ na na na haploid bacteria 4397923 4316186 65.500000 1 1 217 NCBI RefSeq GCF_000443875.1-RS_2025_06_29 2025-06-29 4292 3961 51 23884993 GCF_000443895.1 PRJNA224116 SAMN02471049 ATET00000000.1 na 1346788 1773 Mycobacterium tuberculosis PanR0301 strain=PanR0301 na latest Chromosome Major Full 2013-08-08 fedora0301c_IS Texas A&M University GCA_000443895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/895/GCF_000443895.1_fedora0301c_IS/ na na na haploid bacteria 4395537 4340496 65.500000 1 1 146 NCBI RefSeq GCF_000443895.1-RS_2025_06_28 2025-06-28 4263 3980 51 23884993 GCF_000443915.1 PRJNA224116 SAMN02471092 ATER00000000.1 na 1346786 1773 Mycobacterium tuberculosis PanR0305 strain=PanR0305 na latest Chromosome Major Full 2013-08-08 fedora0305_IS Texas A&M University GCA_000443915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/915/GCF_000443915.1_fedora0305_IS/ na na na haploid bacteria 4386956 4369599 65.500000 1 1 115 NCBI RefSeq GCF_000443915.1-RS_2025_06_29 2025-06-29 4237 3950 51 23884993 GCF_000443935.1 PRJNA224116 SAMN02471084 ATEM00000000.1 na 1346781 1773 Mycobacterium tuberculosis PanR0311 strain=PanR0311 na latest Chromosome Major Full 2013-08-08 fedora0311b_IS Texas A&M University GCA_000443935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/935/GCF_000443935.1_fedora0311b_IS/ na na na haploid bacteria 4404380 4312162 65.500000 1 1 241 NCBI RefSeq GCF_000443935.1-RS_2025_02_25 2025-02-25 4323 3971 51 23884993 GCF_000443975.1 PRJNA224116 SAMN02436406 AURC00000000.1 na 1115805 1282 Staphylococcus epidermidis E13A strain=E13A na latest Contig Major Full 2013-08-05 StaphepE13Av01 JCVI GCA_000443975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/975/GCF_000443975.1_StaphepE13Av01/ na na na haploid bacteria 2408837 2408837 32.000000 0 56 56 NCBI RefSeq GCF_000443975.1-RS_2026_01_13 2026-01-13 2317 2208 35 na GCF_000443995.1 PRJNA224116 SAMN02436194 AUMC00000000.1 na 1201290 1201290 Bacteriovorax sp. BAL6_X strain=BAL6_X na latest Contig Major Full 2013-08-05 Hybrid CA1 filtered J. Craig Venter Institute GCA_000443995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/443/995/GCF_000443995.1_Hybrid_CA1_filtered/ na na na haploid bacteria 3233679 3233679 36.500000 0 10 10 NCBI RefSeq GCF_000443995.1-RS_2024_08_13 2024-08-13 3133 3086 41 na GCF_000444055.1 PRJNA224116 SAMN02230327 AURB00000000.1 na 1356854 1450 Alicyclobacillus acidoterrestris ATCC 49025 strain=ATCC 49025 na latest Contig Major Full 2013-08-05 Alicyclobac_acidoter_v1 Agricultural Research Organisation GCA_000444055.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/055/GCF_000444055.1_Alicyclobac_acidoter_v1/ na assembly from type material na haploid bacteria 4063548 4063548 52.000000 0 207 207 NCBI RefSeq GCF_000444055.1-RS_2026_02_02 2026-02-02 4150 3917 138 24009113 GCF_000444095.1 PRJNA224116 SAMN02470118 AQGJ00000000.1 na 1292035 1505 Paraclostridium sordellii VPI 9048 strain=VPI 9048 na latest Contig Major Full 2013-08-05 ASM44409v1 Kansas State University GCA_000444095.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/095/GCF_000444095.1_ASM44409v1/ na na na haploid bacteria 3571992 3571992 27.500000 0 166 166 NCBI RefSeq GCF_000444095.1-RS_2025_08_05 2025-08-05 3569 3481 53 23873908 GCF_000444115.1 PRJNA224116 SAMN02469668 ATDJ00000000.1 na 1094175 317 Pseudomonas syringae pv. theae NCPPB 2598 strain=NCPPB 2598 na latest Contig Major Full 2013-08-05 CLC6_0_3 CRA GCA_000444115.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/115/GCF_000444115.1_CLC6_0_3/ na na na haploid bacteria 6210320 6210320 58.500000 0 532 532 NCBI RefSeq GCF_000444115.1-RS_2026_01_13 2026-01-13 5788 5480 51 na GCF_000444135.1 PRJNA224116 SAMN02469669 ATDK00000000.1 na 1154758 46257 Pseudomonas avellanae BPIC 631 strain=BPIC 631 na latest Contig Major Full 2013-08-05 CLC6_0_3 CRA GCA_000444135.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/135/GCF_000444135.1_CLC6_0_3/ na assembly from type material na haploid bacteria 5962738 5962738 58.500000 0 611 611 NCBI RefSeq GCF_000444135.1-RS_2026_03_31 2026-03-31 5584 5120 48 24086635 GCF_000444175.1 PRJNA224116 SAMN02230044 AUPD00000000.1 na 1350462 210 Helicobacter pylori wls-5-3 strain=wls-5-3 na latest Contig Major Full 2013-08-06 wls-5-3 Beijing institution of Radiation Medicine, Beijing, China GCA_000444175.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/175/GCF_000444175.1_wls-5-3/ na na na haploid bacteria 1653877 1653877 38.500000 0 91 91 NCBI RefSeq GCF_000444175.1-RS_2025_08_08 2025-08-08 1647 1486 51 na GCF_000444195.2 PRJNA224116 SAMN02393727 AUPY00000000.1 na 1355023 210 Helicobacter pylori wls-5-12 strain=wls-5-12 na latest Contig Minor Full 2013-08-06 wls-5-12 Beijing institution of Radiation Medicine, Beijing, China GCA_000444195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/195/GCF_000444195.2_wls-5-12/ na na na haploid bacteria 1577183 1577183 39.000000 0 64 64 NCBI RefSeq GCF_000444195.2-RS_2026_01_21 2026-01-21 1562 1399 43 na GCF_000444215.1 PRJNA224116 SAMN02470880 AUPF00000000.1 na 1355022 561879 Bacillus safensis VK strain=VK na latest Contig Major Full 2013-08-06 BacSafVK Saurashtra University GCA_000444215.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/215/GCF_000444215.1_BacSafVK/ na na na haploid bacteria 3683090 3683090 41.500000 0 39 39 NCBI RefSeq GCF_000444215.1-RS_2026_04_30 2026-04-30 3792 3529 78 24009116 GCF_000444305.1 PRJNA224116 SAMN02214239 AUSR00000000.1 na 1352345 210 Helicobacter pylori UM111 strain=UM111 na latest Contig Major Full 2013-08-06 UM111 UM-UNSW-MGRC GCA_000444305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/305/GCF_000444305.1_UM111/ na na na haploid bacteria 1663127 1663127 38.500000 0 38 38 NCBI RefSeq GCF_000444305.1-RS_2026_02_02 2026-02-02 1623 1471 51 24051312 GCF_000444325.1 PRJNA224116 SAMN02230262 AUSK00000000.1 na 1365636 210 Helicobacter pylori UM023 strain=UM023 na latest Contig Major Full 2013-08-06 UM023 UM-UNSW-MGRC GCA_000444325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/325/GCF_000444325.1_UM023/ na na na haploid bacteria 1623075 1623075 39.000000 0 34 34 NCBI RefSeq GCF_000444325.1-RS_2025_07_15 2025-07-15 1590 1419 49 24051312 GCF_000444345.1 PRJNA224116 SAMN02214237 AUSL00000000.1 na 1352343 210 Helicobacter pylori UM038 strain=UM038 na latest Contig Major Full 2013-08-06 UM038 UM-UNSW-MGRC GCA_000444345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/345/GCF_000444345.1_UM038/ na na na haploid bacteria 1762049 1762049 38.500000 0 44 44 NCBI RefSeq GCF_000444345.1-RS_2026_01_27 2026-01-27 1709 1562 47 24051312 GCF_000444365.1 PRJNA224116 SAMN02230270 AUSM00000000.1 na 1355528 210 Helicobacter pylori UM065 strain=UM065 na latest Contig Major Full 2013-08-06 UM065 UM-UNSW-MGRC GCA_000444365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/365/GCF_000444365.1_UM065/ na na na haploid bacteria 1586653 1586653 39.000000 0 38 38 NCBI RefSeq GCF_000444365.1-RS_2026_01_27 2026-01-27 1535 1393 49 24051312 GCF_000444385.1 PRJNA224116 SAMN02230273 AUSO00000000.1 na 1355530 210 Helicobacter pylori UM084 strain=UM084 na latest Contig Major Full 2013-08-06 UM084 UM-UNSW-MGRC GCA_000444385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/385/GCF_000444385.1_UM084/ na na na haploid bacteria 1656826 1656826 39.000000 0 34 34 NCBI RefSeq GCF_000444385.1-RS_2026_02_02 2026-02-02 1594 1439 52 24051312 GCF_000444425.1 PRJNA224116 SAMN02603303 na na 1266738 584 Proteus mirabilis BB2000 strain=BB2000 na latest Complete Genome Major Full 2013-08-06 ASM44442v1 Harvard University GCA_000444425.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/425/GCF_000444425.1_ASM44442v1/ na na na haploid bacteria 3846754 3846754 38.500000 1 1 1 NCBI RefSeq GCF_000444425.1-RS_2026_01_06 2026-01-06 3498 3352 106 23882014;24009111 GCF_000444465.1 PRJNA224116 SAMN02604148 na na 1328311 139 Borreliella burgdorferi CA382 strain=CA382 na latest Complete Genome Major Full 2013-08-06 ASM44446v1 University of California Irvine GCA_000444465.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/465/GCF_000444465.1_ASM44446v1/ na na na haploid bacteria 910736 910736 28.500000 1 1 1 NCBI RefSeq GCF_000444465.1-RS_2025_04_24 2025-04-24 858 799 40 na GCF_000444495.1 PRJNA224116 SAMN02230279 AUSS00000000.1 na 1355531 210 Helicobacter pylori UM114 strain=UM114 na latest Contig Major Full 2013-08-06 UM114 UM-UNSW-MGRC GCA_000444495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/495/GCF_000444495.1_UM114/ na na na haploid bacteria 1708937 1708937 39.000000 0 36 36 NCBI RefSeq GCF_000444495.1-RS_2026_02_02 2026-02-02 1653 1504 52 24051312 GCF_000444545.1 PRJNA224116 SAMN02470065 APBT00000000.1 na 1117322 738 Glaesserella parasuis str. Nagasaki strain=Nagasaki na latest Contig Major Full 2013-08-07 ASM44454v1 Iowa State University GCA_000444545.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/545/GCF_000444545.1_ASM44454v1/ na na na haploid bacteria 2178597 2178597 40.000000 0 78 78 NCBI RefSeq GCF_000444545.1-RS_2026_01_23 2026-01-23 2330 2130 72 24051319 GCF_000444625.1 PRJNA224116 SAMN02470071 APBX00000000.1 na 1275969 738 Glaesserella parasuis 84-15995 strain=84-15995 na latest Contig Major Full 2013-08-07 ASM44462v1 Iowa State University GCA_000444625.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/625/GCF_000444625.1_ASM44462v1/ na na na haploid bacteria 2090833 2090833 40.000000 0 73 73 NCBI RefSeq GCF_000444625.1-RS_2026_01_23 2026-01-23 2197 2017 52 24051319 GCF_000444665.1 PRJNA224116 SAMN02470066 APBZ00000000.1 na 1275971 738 Glaesserella parasuis D74 strain=D74 na latest Contig Major Full 2013-08-07 ASM44466v1 Iowa State University GCA_000444665.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/665/GCF_000444665.1_ASM44466v1/ na na na haploid bacteria 2229567 2229567 39.500000 0 68 68 NCBI RefSeq GCF_000444665.1-RS_2025_12_26 2025-12-26 2201 2049 59 24051319 GCF_000444725.1 PRJNA224116 SAMN02214242 AUSQ00000000.1 na 1352346 210 Helicobacter pylori UM077 strain=UM077 na latest Contig Major Full 2013-08-07 UM077 UM-UNSW-MGRC GCA_000444725.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/725/GCF_000444725.1_UM077/ na na na haploid bacteria 1619377 1619377 39.000000 0 53 53 NCBI RefSeq GCF_000444725.1-RS_2026_02_02 2026-02-02 1601 1450 51 24051312 GCF_000444745.1 PRJNA224116 SAMN02214238 AUSP00000000.1 na 1352344 210 Helicobacter pylori UM085 strain=UM085 na latest Contig Major Full 2013-08-07 UM085 UM-UNSW-MGRC GCA_000444745.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/745/GCF_000444745.1_UM085/ na na na haploid bacteria 1645062 1645062 38.500000 0 50 50 NCBI RefSeq GCF_000444745.1-RS_2026_02_02 2026-02-02 1604 1469 51 24051312 GCF_000444785.1 PRJNA224116 SAMN02230272 AUSN00000000.1 na 1355529 210 Helicobacter pylori UM067 strain=UM067 na latest Contig Major Full 2013-08-07 UM067 UM-UNSW-MGRC GCA_000444785.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/785/GCF_000444785.1_UM067/ na na na haploid bacteria 1680838 1680838 39.000000 0 44 44 NCBI RefSeq GCF_000444785.1-RS_2026_01_27 2026-01-27 1633 1464 51 24051312 GCF_000444835.2 PRJNA224116 SAMN02217010 ATWR00000000.2 na 1352603 28901 Salmonella enterica subsp. enterica serovar Typhimurium str. STm7 strain=STm7 na latest Contig Major Full 2017-10-26 ASM44483v2 University of Melbourne GCA_000444835.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/835/GCF_000444835.2_ASM44483v2/ na na na haploid bacteria 5038874 5038874 52.000000 0 81 81 NCBI RefSeq GCF_000444835.2-RS_2025_06_03 2025-06-03 4977 4741 83 24245509 GCF_000444855.2 PRJNA224116 SAMN02570520 AUTW00000000.2 na 1357295 573 Klebsiella pneumoniae EGD-HP19-C strain=EGD-HP19-C na latest Contig Major Full 2014-02-26 GS De Novo Assembly National Environmental Engineering Research Institute-CSIR GCA_000444855.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/855/GCF_000444855.2_GS_De_Novo_Assembly/ na na na haploid bacteria 5121641 5121641 57.500000 0 107 107 NCBI RefSeq GCF_000444855.2-RS_2025_07_19 2025-07-19 5099 4835 81 na GCF_000444875.1 PRJNA224116 SAMN02603029 na na 1214242 42684 Streptomyces collinus Tu 365 strain=Tu 365 na latest Complete Genome Major Full 2013-08-06 ASM44487v1 Bielefeld University GCA_000444875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/875/GCF_000444875.1_ASM44487v1/ na na na haploid bacteria 8377286 8377286 72.500000 3 3 3 NCBI RefSeq GCF_000444875.1-RS_2025_03_16 2025-03-16 7329 7091 89 24140291 GCF_000444935.1 PRJNA224116 SAMN02469787 ASHL00000000.1 na 34068 34068 Cycloclasticus pugetii strain=PY97M na latest Scaffold Major Full 2013-08-09 ASM44493v1 First Institute of Oceanography, State Oceanic Administration of China GCA_000444935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/935/GCF_000444935.1_ASM44493v1/ na na na haploid bacteria 2359619 2359509 42.000000 0 28 39 NCBI RefSeq GCF_000444935.1-RS_2026_02_02 2026-02-02 2307 2245 55 23908283 GCF_000444995.1 PRJNA224116 SAMN02604253 na reference genome 1367847 34003 Paracoccus aminophilus JCM 7686 strain=JCM 7686 na latest Complete Genome Major Full 2013-08-08 ASM44499v1 University of Warsaw, Faculty of Biology, Institute of Microbiology, Department of Bacterial Genetics GCA_000444995.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/444/995/GCF_000444995.1_ASM44499v1/ na assembly from type material na haploid bacteria 4873118 4873118 63.500000 6 6 6 NCBI RefSeq GCF_000444995.1-RS_2025_12_11 2025-12-11 4714 4580 76 24517536 GCF_000445015.1 PRJNA224116 SAMN02603059 na na 1310161 1718 Corynebacterium glutamicum MB001 strain=MB001 na latest Complete Genome Major Full 2013-08-08 ASM44501v1 CeBiTec, Bielefeld University GCA_000445015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/015/GCF_000445015.1_ASM44501v1/ na na na haploid bacteria 3079253 3079253 54.000000 1 1 1 NCBI RefSeq GCF_000445015.1-RS_2026_03_28 2026-03-28 2858 2724 79 23892752 GCF_000445035.1 PRJNA224116 SAMN02603852 na na 1303024 36809 Mycobacteroides abscessus subsp. bolletii 50594 strain=50594 na latest Complete Genome Major Full 2013-05-22 ASM44503v1 Seoul National University College of Medicine GCA_000445035.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/035/GCF_000445035.1_ASM44503v1/ na na na haploid bacteria 5270527 5270527 64.000000 3 3 3 NCBI RefSeq GCF_000445035.1-RS_2025_12_12 2025-12-12 5331 5189 54 23833135 GCF_000445065.1 PRJNA224116 SAMN02471719 ATHO00000000.1 reference genome 1329909 538379 Sphingobium quisquiliarum P25 strain=P25 na latest Contig Major Full 2013-08-09 ASM44506v1 University Of Delhi GCA_000445065.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/065/GCF_000445065.1_ASM44506v1/ na assembly from type material na haploid bacteria 4170546 4170546 64.000000 0 181 181 NCBI RefSeq GCF_000445065.1-RS_2025_12_11 2025-12-11 4121 3949 61 24029763 GCF_000445085.1 PRJNA224116 SAMN02471714 ATDO00000000.1 na 428994 428994 Sphingobium sp. HDIP04 strain=HDIP04 na latest Contig Major Full 2013-08-09 ASM44508v1 University of Delhi GCA_000445085.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/085/GCF_000445085.1_ASM44508v1/ na na na haploid bacteria 4741576 4741576 65.000000 0 143 143 NCBI RefSeq GCF_000445085.1-RS_2025_08_27 2025-08-27 4713 4563 69 24051321 GCF_000445105.1 PRJNA224116 SAMN02471713 ATDP00000000.1 reference genome 1331060 522773 Sphingobium lactosutens DS20 strain=DS20 na latest Contig Major Full 2013-08-09 ASM44510v1 University of Delhi GCA_000445105.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/105/GCF_000445105.1_ASM44510v1/ na assembly from type material na haploid bacteria 5360246 5360246 63.000000 0 110 110 NCBI RefSeq GCF_000445105.1-RS_2025_12_11 2025-12-11 5339 5119 76 24051323 GCF_000445125.1 PRJNA224116 SAMN02471710 ATHL00000000.1 reference genome 1096930 1329895 Novosphingobium lindaniclasticum LE124 strain=LE124 na latest Contig Major Full 2013-08-09 ASM44512v1 University of Delhi GCA_000445125.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/125/GCF_000445125.1_ASM44512v1/ na assembly from type material na haploid bacteria 4857928 4857928 64.500000 0 156 156 NCBI RefSeq GCF_000445125.1-RS_2025_12_10 2025-12-10 4633 4464 66 24029761 GCF_000445145.1 PRJNA224116 SAMN02471716 ATIB00000000.1 na 1114964 595605 Sphingobium wenxiniae LL03 strain=LL03 na latest Contig Major Full 2013-08-09 ASM44514v1 University of Delhi GCA_000445145.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/145/GCF_000445145.1_ASM44514v1/ na assembly from heterotypic synonym type material na haploid bacteria 4848286 4848286 63.500000 0 92 92 NCBI RefSeq GCF_000445145.1-RS_2026_01_27 2026-01-27 4854 4674 71 24051322 GCF_000445165.1 PRJNA224116 SAMN02471907 AUUR00000000.1 na 1339256 1339256 Dehalobacter sp. UNSWDHB strain=UNSWDHB na latest Scaffold Major Full 2013-08-09 UNSWDHB The University of New South Wales GCA_000445165.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/165/GCF_000445165.1_UNSWDHB/ na na na haploid bacteria 3201560 3201288 45.000000 0 185 193 NCBI RefSeq GCF_000445165.1-RS_2024_06_07 2024-06-07 3139 3004 64 24051315 GCF_000445185.1 PRJNA224116 SAMN02212367 AVAF00000000.1 na 1350366 1350366 Thermoanaerobacter sp. A7A na na latest Contig Major Full 2013-08-09 Thermoanaerobacter CSIRO Animal, Food and Health Sciences GCA_000445185.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/185/GCF_000445185.1_Thermoanaerobacter/ derived from metagenome na na haploid bacteria 2614610 2614610 34.000000 0 178 178 NCBI RefSeq GCF_000445185.1-RS_2024_03_24 2024-03-24 2762 2599 54 24029756 GCF_000445225.2 PRJNA224116 SAMN02221861 AUXA00000000.2 na 1352602 1336 Streptococcus equi subsp. zooepidemicus SzS31A1 strain=SzS31A1 na latest Contig Major Full 2014-05-13 ASM44522v2 Copenhagen University GCA_000445225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/225/GCF_000445225.2_ASM44522v2/ na na na haploid bacteria 2025884 2025884 41.500000 0 89 89 NCBI RefSeq GCF_000445225.2-RS_2026_01_24 2026-01-24 1953 1857 46 24009118 GCF_000445245.1 PRJNA224116 SAMN02471050 ATRP00000000.1 na 1352570 1773 Mycobacterium tuberculosis PanR0501 strain=PanR0501 na latest Chromosome Major Full 2013-08-15 fedora0501_IS Texas A&M University GCA_000445245.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/245/GCF_000445245.1_fedora0501_IS/ na na na haploid bacteria 4407393 4355710 65.500000 1 1 122 NCBI RefSeq GCF_000445245.1-RS_2025_06_29 2025-06-29 4239 3946 51 23884993 GCF_000445265.1 PRJNA224116 SAMN02471074 ATRQ00000000.1 na 1352571 1773 Mycobacterium tuberculosis PanR0503 strain=PanR0503 na latest Chromosome Major Full 2013-08-15 fedora0503_IS Texas A&M University GCA_000445265.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/265/GCF_000445265.1_fedora0503_IS/ na na na haploid bacteria 4386949 4324957 65.500000 1 1 142 NCBI RefSeq GCF_000445265.1-RS_2025_06_29 2025-06-29 4237 3942 51 23884993 GCF_000445285.1 PRJNA224116 SAMN02471058 ATRR00000000.1 na 1352572 1773 Mycobacterium tuberculosis PanR0505 strain=PanR0505 na latest Chromosome Major Full 2013-08-15 fedora0505_IS Texas A&M University GCA_000445285.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/285/GCF_000445285.1_fedora0505_IS/ na na na haploid bacteria 4407883 4338123 65.500000 1 1 139 NCBI RefSeq GCF_000445285.1-RS_2025_06_29 2025-06-29 4245 3944 51 23884993 GCF_000445305.1 PRJNA224116 SAMN02471075 ATRS00000000.1 na 1352573 1773 Mycobacterium tuberculosis PanR0601 strain=PanR0601 na latest Chromosome Major Full 2013-08-15 fedora0601c_IS Texas A&M University GCA_000445305.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/305/GCF_000445305.1_fedora0601c_IS/ na na na haploid bacteria 4388875 4265528 65.000000 1 1 669 NCBI RefSeq GCF_000445305.1-RS_2026_03_09 2026-03-09 4688 4138 51 23884993 GCF_000445325.1 PRJNA224116 SAMN02471059 ATRT00000000.1 na 1352574 1773 Mycobacterium tuberculosis PanR0602 strain=PanR0602 na latest Chromosome Major Full 2013-08-15 fedora0602_IS Texas A&M University GCA_000445325.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/325/GCF_000445325.1_fedora0602_IS/ na na na haploid bacteria 4406449 4374045 65.500000 1 1 102 NCBI RefSeq GCF_000445325.1-RS_2025_06_29 2025-06-29 4225 3953 51 23884993 GCF_000445345.1 PRJNA224116 SAMN02471094 ATRU00000000.1 na 1352575 1773 Mycobacterium tuberculosis PanR0603 strain=PanR0603 na latest Chromosome Major Full 2013-08-15 fedora0603_IS Texas A&M University GCA_000445345.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/345/GCF_000445345.1_fedora0603_IS/ na na na haploid bacteria 4408055 4326418 65.500000 1 1 150 NCBI RefSeq GCF_000445345.1-RS_2025_06_29 2025-06-29 4244 3938 51 23884993 GCF_000445365.1 PRJNA224116 SAMN02471051 ATRV00000000.1 na 1352576 1773 Mycobacterium tuberculosis PanR0604 strain=PanR0604 na latest Chromosome Major Full 2013-08-15 fedora0604_IS Texas A&M University GCA_000445365.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/365/GCF_000445365.1_fedora0604_IS/ na na na haploid bacteria 4388029 4340510 65.500000 1 1 134 NCBI RefSeq GCF_000445365.1-RS_2025_06_29 2025-06-29 4241 3953 51 23884993 GCF_000445385.1 PRJNA224116 SAMN02470547 ATJY00000000.1 na 1343079 28450 Burkholderia pseudomallei MSHR338 strain=MSHR338 na latest Contig Major Full 2013-08-08 MSHR338 Menzies School of Health Research GCA_000445385.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/385/GCF_000445385.1_MSHR338/ na na na haploid bacteria 7317227 7317227 68.000000 0 59 59 NCBI RefSeq GCF_000445385.1-RS_2026_03_21 2026-03-21 6612 6364 66 25339397 GCF_000445425.4 PRJNA224116 SAMN02604147 na na 1302858 47466 Borrelia miyamotoi LB-2001 strain=LB-2001 na latest Complete Genome Major Full 2015-11-04 ASM44542v4 University of California Irvine GCA_000445425.4 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/425/GCF_000445425.4_ASM44542v4/ na na na haploid bacteria 937966 937966 28.500000 2 2 2 NCBI RefSeq GCF_000445425.4-RS_2026_04_02 2026-04-02 891 828 37 24029760;26785134 GCF_000445445.2 PRJNA224116 SAMN02469826 na reference genome 1123288 2378 Sporomusa ovata DSM 2662 strain=DSM 2662 na latest Complete Genome Major Full 2024-03-08 SOV Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory GCA_000445445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/445/GCF_000445445.2_SOV/ na assembly from type material na haploid bacteria 5433971 5433971 43.500000 1 1 1 NCBI RefSeq GCF_000445445.2-RS_2025_04_05 2025-04-05 5405 5115 210 24029766 GCF_000445475.1 PRJNA224116 SAMN02471177 AUPZ00000000.1 reference genome 1172190 1172190 Sulfurimonas hongkongensis strain=AST-10 na latest Contig Major Full 2013-08-13 Version 1 of the Sulfurimonas hongkongensis AST-10 genome The University of Hong Kong GCA_000445475.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/475/GCF_000445475.1_Version_1_of_the_Sulfurimonas_hongkongensis_AST-10_genome/ na assembly from type material na haploid bacteria 2302023 2302023 35.000000 0 28 28 NCBI RefSeq GCF_000445475.1-RS_2026_05_02 2026-05-02 2287 2229 46 na GCF_000445495.1 PRJNA224116 SAMN02471178 AUQA00000000.1 na 1354277 1354277 Virgibacillus sp. CM-4 strain=CM-4 na latest Contig Major Full 2013-08-13 Version 1 of the Virgibacillus hongkongensis CM-4 genome The University of Hong Kong GCA_000445495.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/495/GCF_000445495.1_Version_1_of_the_Virgibacillus_hongkongensis_CM-4_genome/ na na na haploid bacteria 4182182 4182182 37.000000 0 20 20 NCBI RefSeq GCF_000445495.1-RS_2024_08_13 2024-08-13 4195 4071 62 na GCF_000445515.1 PRJNA224116 SAMN02471060 ATRW00000000.1 na 1352577 1773 Mycobacterium tuberculosis PanR0605 strain=PanR0605 na latest Chromosome Major Full 2013-08-15 fedora0605_IS Texas A&M University GCA_000445515.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/515/GCF_000445515.1_fedora0605_IS/ na na na haploid bacteria 4405197 4365963 65.500000 1 1 84 NCBI RefSeq GCF_000445515.1-RS_2025_06_28 2025-06-28 4196 3901 51 23884993 GCF_000445535.1 PRJNA224116 SAMN02471100 ATRX00000000.1 na 1352578 1773 Mycobacterium tuberculosis PanR0606 strain=PanR0606 na latest Chromosome Major Full 2013-08-15 fedora0606c_IS Texas A&M University GCA_000445535.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/535/GCF_000445535.1_fedora0606c_IS/ na na na haploid bacteria 4408738 4376208 65.500000 1 1 59 NCBI RefSeq GCF_000445535.1-RS_2025_06_28 2025-06-28 4185 3923 51 23884993 GCF_000445555.1 PRJNA224116 SAMN02471061 ATRY00000000.1 na 1352579 1773 Mycobacterium tuberculosis PanR0607 strain=PanR0607 na latest Chromosome Major Full 2013-08-15 fedora0607c_IS Texas A&M University GCA_000445555.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/555/GCF_000445555.1_fedora0607c_IS/ na na na haploid bacteria 4405199 4374466 65.500000 1 1 81 NCBI RefSeq GCF_000445555.1-RS_2025_06_29 2025-06-29 4206 3937 51 23884993 GCF_000445575.1 PRJNA224116 SAMN02471052 ATRZ00000000.1 na 1352580 1773 Mycobacterium tuberculosis PanR0609 strain=PanR0609 na latest Chromosome Major Full 2013-08-15 fedora0609c_IS Texas A&M University GCA_000445575.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/575/GCF_000445575.1_fedora0609c_IS/ na na na haploid bacteria 4405944 4372823 65.500000 1 1 77 NCBI RefSeq GCF_000445575.1-RS_2025_06_28 2025-06-28 4202 3933 51 23884993 GCF_000445595.1 PRJNA224116 SAMN02471076 ATSA00000000.1 na 1352581 1773 Mycobacterium tuberculosis PanR0610 strain=PanR0610 na latest Chromosome Major Full 2013-08-15 fedora0610c_IS Texas A&M University GCA_000445595.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/595/GCF_000445595.1_fedora0610c_IS/ na na na haploid bacteria 4402491 4371116 65.500000 1 1 97 NCBI RefSeq GCF_000445595.1-RS_2025_06_29 2025-06-29 4224 3949 51 23884993 GCF_000445615.1 PRJNA224116 SAMN02471111 ATSB00000000.1 na 1352582 1773 Mycobacterium tuberculosis PanR0611 strain=PanR0611 na latest Chromosome Major Full 2013-08-15 fedora0611c_IS Texas A&M University GCA_000445615.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/615/GCF_000445615.1_fedora0611c_IS/ na na na haploid bacteria 4398105 4355491 65.500000 1 1 146 NCBI RefSeq GCF_000445615.1-RS_2025_06_29 2025-06-29 4258 3964 51 23884993 GCF_000445635.1 PRJNA224116 SAMN02471095 ATSC00000000.1 na 1352583 1773 Mycobacterium tuberculosis PanR0702 strain=PanR0702 na latest Chromosome Major Full 2013-08-15 fedora0702f_IS Texas A&M University GCA_000445635.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/635/GCF_000445635.1_fedora0702f_IS/ na na na haploid bacteria 4406983 4344025 65.500000 1 1 148 NCBI RefSeq GCF_000445635.1-RS_2025_06_28 2025-06-28 4261 3957 51 23884993 GCF_000445655.1 PRJNA224116 SAMN02471101 ATSD00000000.1 na 1352584 1773 Mycobacterium tuberculosis PanR0703 strain=PanR0703 na latest Chromosome Major Full 2013-08-15 fedora0703c_IS Texas A&M University GCA_000445655.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/655/GCF_000445655.1_fedora0703c_IS/ na na na haploid bacteria 4398277 4360657 65.500000 1 1 155 NCBI RefSeq GCF_000445655.1-RS_2025_06_29 2025-06-29 4278 3963 51 23884993 GCF_000445675.1 PRJNA224116 SAMN02471112 ATSE00000000.1 na 1352585 1773 Mycobacterium tuberculosis PanR0707 strain=PanR0707 na latest Chromosome Major Full 2013-08-15 fedora0707_IS Texas A&M University GCA_000445675.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/675/GCF_000445675.1_fedora0707_IS/ na na na haploid bacteria 4405806 4361615 65.500000 1 1 143 NCBI RefSeq GCF_000445675.1-RS_2025_06_28 2025-06-28 4265 3956 51 23884993 GCF_000445695.1 PRJNA224116 SAMN02471102 ATSF00000000.1 na 1352586 1773 Mycobacterium tuberculosis PanR0708 strain=PanR0708 na latest Chromosome Major Full 2013-08-15 fedora0708c_IS Texas A&M University GCA_000445695.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/695/GCF_000445695.1_fedora0708c_IS/ na na na haploid bacteria 4399724 4382177 65.500000 1 1 55 NCBI RefSeq GCF_000445695.1-RS_2025_06_28 2025-06-28 4184 3930 51 23884993 GCF_000445715.1 PRJNA224116 SAMN02471096 ATSG00000000.1 na 1352587 1773 Mycobacterium tuberculosis PanR0801 strain=PanR0801 na latest Chromosome Major Full 2013-08-15 fedora0801c_IS Texas A&M University GCA_000445715.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/715/GCF_000445715.1_fedora0801c_IS/ na na na haploid bacteria 4400549 4352708 65.500000 1 1 117 NCBI RefSeq GCF_000445715.1-RS_2025_06_29 2025-06-29 4219 3928 51 23884993 GCF_000445735.1 PRJNA224116 SAMN02471062 ATSH00000000.1 na 1352588 1773 Mycobacterium tuberculosis PanR0803 strain=PanR0803 na latest Chromosome Major Full 2013-08-15 fedora0803c_IS Texas A&M University GCA_000445735.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/735/GCF_000445735.1_fedora0803c_IS/ na na na haploid bacteria 4406371 4378807 65.500000 1 1 53 NCBI RefSeq GCF_000445735.1-RS_2025_06_28 2025-06-28 4177 3921 51 23884993 GCF_000445755.1 PRJNA224116 SAMN02471053 ATSI00000000.1 na 1352589 1773 Mycobacterium tuberculosis PanR0804 strain=PanR0804 na latest Chromosome Major Full 2013-08-15 fedora0804_IS Texas A&M University GCA_000445755.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/755/GCF_000445755.1_fedora0804_IS/ na na na haploid bacteria 4402266 4355333 65.500000 1 1 145 NCBI RefSeq GCF_000445755.1-RS_2025_02_24 2025-02-24 4255 3958 51 23884993 GCF_000445775.1 PRJNA224116 SAMN02471054 ATSJ00000000.1 na 1352590 1773 Mycobacterium tuberculosis PanR0805 strain=PanR0805 na latest Chromosome Major Full 2013-08-15 fedora0805c_IS Texas A&M University GCA_000445775.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/775/GCF_000445775.1_fedora0805c_IS/ na na na haploid bacteria 4394016 4304191 65.500000 1 1 281 NCBI RefSeq GCF_000445775.1-RS_2025_06_28 2025-06-28 4344 3977 51 23884993 GCF_000445795.1 PRJNA224116 SAMN02471077 ATSK00000000.1 na 1352591 1773 Mycobacterium tuberculosis PanR0902 strain=PanR0902 na latest Chromosome Major Full 2013-08-15 fedora0902c_IS Texas A&M University GCA_000445795.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/795/GCF_000445795.1_fedora0902c_IS/ na na na haploid bacteria 4392209 4301429 65.500000 1 1 170 NCBI RefSeq GCF_000445795.1-RS_2025_06_29 2025-06-29 4252 3950 51 23884993 GCF_000445815.1 PRJNA224116 SAMN02471097 ATSL00000000.1 na 1352592 1773 Mycobacterium tuberculosis PanR0903 strain=PanR0903 na latest Chromosome Major Full 2013-08-15 fedora0903_IS Texas A&M University GCA_000445815.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/815/GCF_000445815.1_fedora0903_IS/ na na na haploid bacteria 4402661 4378776 65.500000 1 1 68 NCBI RefSeq GCF_000445815.1-RS_2025_06_29 2025-06-29 4198 3931 51 23884993 GCF_000445835.1 PRJNA224116 SAMN02471078 ATSM00000000.1 na 1352593 1773 Mycobacterium tuberculosis PanR0904 strain=PanR0904 na latest Chromosome Major Full 2013-08-15 fedora0904_IS Texas A&M University GCA_000445835.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/835/GCF_000445835.1_fedora0904_IS/ na na na haploid bacteria 4407151 4372915 65.500000 1 1 84 NCBI RefSeq GCF_000445835.1-RS_2025_06_29 2025-06-29 4211 3935 51 23884993 GCF_000445855.1 PRJNA224116 SAMN02471073 ATSN00000000.1 na 1352594 1773 Mycobacterium tuberculosis PanR0906 strain=PanR0906 na latest Chromosome Major Full 2013-08-15 fedora0906c_IS Texas A&M University GCA_000445855.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/855/GCF_000445855.1_fedora0906c_IS/ na na na haploid bacteria 4399991 4389674 65.500000 1 1 44 NCBI RefSeq GCF_000445855.1-RS_2025_06_29 2025-06-29 4185 3936 51 23884993 GCF_000445875.1 PRJNA224116 SAMN02471098 ATSO00000000.1 na 1352595 1773 Mycobacterium tuberculosis PanR0907 strain=PanR0907 na latest Chromosome Major Full 2013-08-15 fedora0907c_IS Texas A&M University GCA_000445875.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/875/GCF_000445875.1_fedora0907c_IS/ na na na haploid bacteria 4400321 4374597 65.500000 1 1 84 NCBI RefSeq GCF_000445875.1-RS_2025_06_29 2025-06-29 4209 3942 51 23884993 GCF_000445895.1 PRJNA224116 SAMN02471055 ATSP00000000.1 na 1352596 1773 Mycobacterium tuberculosis PanR0908 strain=PanR0908 na latest Chromosome Major Full 2013-08-15 fedora0908c_IS Texas A&M University GCA_000445895.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/895/GCF_000445895.1_fedora0908c_IS/ na na na haploid bacteria 4400052 4368298 65.500000 1 1 144 NCBI RefSeq GCF_000445895.1-RS_2025_06_28 2025-06-28 4275 3969 51 23884993 GCF_000445915.1 PRJNA224116 SAMN02471056 ATSQ00000000.1 na 1352597 1773 Mycobacterium tuberculosis PanR0909 strain=PanR0909 na latest Chromosome Major Full 2013-08-15 fedora0909_IS Texas A&M University GCA_000445915.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/915/GCF_000445915.1_fedora0909_IS/ na na na haploid bacteria 4408002 4361239 65.500000 1 1 144 NCBI RefSeq GCF_000445915.1-RS_2025_06_29 2025-06-29 4264 3955 51 23884993 GCF_000445935.1 PRJNA224116 SAMN02471072 ATSR00000000.1 na 1352599 1773 Mycobacterium tuberculosis PanR1007 strain=PanR1007 na latest Chromosome Major Full 2013-08-15 fedora1007_IS Texas A&M University GCA_000445935.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/935/GCF_000445935.1_fedora1007_IS/ na na na haploid bacteria 4398360 4350938 65.500000 1 1 54 NCBI RefSeq GCF_000445935.1-RS_2025_02_24 2025-02-24 4142 3898 51 23884993 GCF_000445955.1 PRJNA224116 SAMN02471057 ATSS00000000.1 na 1352600 1773 Mycobacterium tuberculosis PanR1101 strain=PanR1101 na latest Chromosome Major Full 2013-08-15 fedora1101e_IS Texas A&M University GCA_000445955.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/955/GCF_000445955.1_fedora1101e_IS/ na na na haploid bacteria 4369690 4338452 65.500000 1 1 140 NCBI RefSeq GCF_000445955.1-RS_2025_06_29 2025-06-29 4254 3955 51 23884993 GCF_000445975.1 PRJNA224116 SAMN02471099 ATST00000000.1 na 1352598 1773 Mycobacterium tuberculosis PanR1006 strain=PanR1006 na latest Chromosome Major Full 2013-08-15 fedora1006_IS Texas A&M University GCA_000445975.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/975/GCF_000445975.1_fedora1006_IS/ na na na haploid bacteria 4409116 4364884 65.500000 1 1 114 NCBI RefSeq GCF_000445975.1-RS_2025_06_28 2025-06-28 4238 3941 51 23884993 GCF_000445995.2 PRJNA224116 SAMN02603868 na na 1921421 1921421 Geobacillus genomosp. 3 strain=JF8 na latest Complete Genome Major Full 2013-11-18 ASM44599v2 Shizuoka University GCA_000445995.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/445/995/GCF_000445995.2_ASM44599v2/ na na na haploid bacteria 3486308 3486308 53.000000 2 2 2 NCBI RefSeq GCF_000445995.2-RS_2025_03_23 2025-03-23 3536 3322 123 24459274 GCF_000446015.1 PRJNA224116 SAMN02602995 na reference genome 1365176 1365176 Thermofilum adornatum strain=1910b na latest Complete Genome Major Full 2013-08-13 ASM44601v1 Baltic Federal University GCA_000446015.1 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/015/GCF_000446015.1_ASM44601v1/ na assembly from type material na haploid archaea 1750259 1750259 46.500000 1 1 1 NCBI RefSeq GCF_000446015.1-RS_2026_03_30 2026-03-30 1925 1869 49 24029764 GCF_000446075.2 PRJNA224116 SAMN02435957 AIAE00000000.1 na 1124986 562 Escherichia coli C12_92 strain=C12_92 na latest Contig Minor Full 2013-08-13 ASM44607v2 University of Maryland School of Medicine GCA_000446075.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/075/GCF_000446075.2_ASM44607v2/ na na na haploid bacteria 5110133 5110133 50.500000 0 222 222 NCBI RefSeq GCF_000446075.2-RS_2025_06_15 2025-06-15 5121 4729 95 na GCF_000446095.2 PRJNA224116 SAMN02435999 AIAD00000000.1 na 1124985 562 Escherichia coli C1244_91 strain=C1244_91 na latest Contig Minor Full 2013-08-13 ASM44609v2 University of Maryland School of Medicine GCA_000446095.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/095/GCF_000446095.2_ASM44609v2/ na na na haploid bacteria 5289163 5289163 50.500000 0 304 304 NCBI RefSeq GCF_000446095.2-RS_2025_06_15 2025-06-15 5428 4979 99 na GCF_000446115.2 PRJNA224116 SAMN02435901 AIAC00000000.1 na 1124984 562 Escherichia coli C1214_90 strain=C1214_90 na latest Contig Minor Full 2013-08-13 ASM44611v2 University of Maryland School of Medicine GCA_000446115.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/115/GCF_000446115.2_ASM44611v2/ na na na haploid bacteria 5577277 5577277 50.500000 0 512 512 NCBI RefSeq GCF_000446115.2-RS_2025_06_16 2025-06-16 5972 5436 105 na GCF_000446135.2 PRJNA224116 SAMN02436000 AIAF00000000.1 na 1124987 562 Escherichia coli C154_11 strain=C154_11 na latest Contig Minor Full 2013-08-13 ASM44613v2 University of Maryland School of Medicine GCA_000446135.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/135/GCF_000446135.2_ASM44613v2/ na na na haploid bacteria 5160295 5160295 50.500000 0 349 349 NCBI RefSeq GCF_000446135.2-RS_2025_07_13 2025-07-13 5338 4923 95 na GCF_000446155.2 PRJNA224116 SAMN02435958 AIAG00000000.1 na 1124988 562 Escherichia coli C155_11 strain=C155_11 na latest Contig Minor Full 2013-08-13 ASM44615v2 University of Maryland School of Medicine GCA_000446155.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/155/GCF_000446155.2_ASM44615v2/ na na na haploid bacteria 5492836 5492836 50.500000 0 563 563 NCBI RefSeq GCF_000446155.2-RS_2025_06_17 2025-06-17 5914 5408 94 na GCF_000446175.2 PRJNA224116 SAMN02436001 AIAH00000000.1 na 1124989 562 Escherichia coli C157_11 strain=C157_11 na latest Contig Minor Full 2013-08-13 ASM44617v2 University of Maryland School of Medicine GCA_000446175.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/175/GCF_000446175.2_ASM44617v2/ na na na haploid bacteria 5488783 5488783 50.500000 0 480 480 NCBI RefSeq GCF_000446175.2-RS_2025_06_17 2025-06-17 5772 5237 96 na GCF_000446195.2 PRJNA224116 SAMN02435902 AIAI00000000.1 na 1127123 562 Escherichia coli C161_11 strain=C161_11 na latest Contig Minor Full 2013-08-13 ASM44619v2 University of Maryland School of Medicine GCA_000446195.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/195/GCF_000446195.2_ASM44619v2/ na na na haploid bacteria 5249187 5249187 50.500000 0 414 414 NCBI RefSeq GCF_000446195.2-RS_2025_07_10 2025-07-10 5408 4948 96 na GCF_000446225.2 PRJNA224116 SAMN02435959 AIAL00000000.1 na 1127126 562 Escherichia coli C213_10 strain=C213_10 na latest Contig Minor Full 2013-08-13 ASM44622v2 University of Maryland School of Medicine GCA_000446225.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/225/GCF_000446225.2_ASM44622v2/ na na na haploid bacteria 4702537 4702537 50.500000 0 133 133 NCBI RefSeq GCF_000446225.2-RS_2025_06_16 2025-06-16 4695 4385 89 na GCF_000446265.2 PRJNA224116 SAMN02435944 AICF00000000.1 na 1136137 562 Escherichia coli C166_11 strain=C1214_90 na latest Contig Minor Full 2013-08-13 ASM44626v2 University of Maryland School of Medicine GCA_000446265.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/265/GCF_000446265.2_ASM44626v2/ na na na haploid bacteria 5445230 5445230 50.500000 0 469 469 NCBI RefSeq GCF_000446265.2-RS_2025_06_17 2025-06-17 5804 5350 96 na GCF_000446285.2 PRJNA224116 SAMN02435938 AIAM00000000.1 na 1126888 562 Escherichia coli C2139_99 strain=C2139_99 na latest Contig Minor Full 2013-08-13 ASM44628v2 IGS GCA_000446285.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/285/GCF_000446285.2_ASM44628v2/ na na na haploid bacteria 4836423 4836423 50.500000 0 152 152 NCBI RefSeq GCF_000446285.2-RS_2025_06_17 2025-06-17 4806 4510 86 na GCF_000446305.2 PRJNA224116 SAMN02435960 AIAN00000000.1 na 1126889 562 Escherichia coli C238_91 strain=C238_91 na latest Contig Minor Full 2013-08-13 ASM44630v2 IGS GCA_000446305.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/305/GCF_000446305.2_ASM44630v2/ na na na haploid bacteria 5358439 5358439 50.500000 0 512 512 NCBI RefSeq GCF_000446305.2-RS_2025_07_10 2025-07-10 5719 5198 99 na GCF_000446325.2 PRJNA224116 SAMN02435961 AIAO00000000.1 na 1126890 562 Escherichia coli C260_92 strain=C260_92 na latest Contig Minor Full 2013-08-13 ASM44632v2 IGS GCA_000446325.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/325/GCF_000446325.2_ASM44632v2/ na na na haploid bacteria 4713090 4713090 50.500000 0 202 202 NCBI RefSeq GCF_000446325.2-RS_2025_07_14 2025-07-14 4758 4400 92 na GCF_000446345.2 PRJNA224116 SAMN02435903 AIAP00000000.1 na 1126891 562 Escherichia coli C262_10 strain=C262_10 na latest Contig Minor Full 2013-08-13 ASM44634v2 IGS GCA_000446345.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/345/GCF_000446345.2_ASM44634v2/ na na na haploid bacteria 4721723 4721723 50.500000 0 186 186 NCBI RefSeq GCF_000446345.2-RS_2025_07_10 2025-07-10 4829 4510 86 na GCF_000446365.2 PRJNA224116 SAMN02436003 AIAQ00000000.1 na 1126892 562 Escherichia coli C283_09 strain=C283_09 na latest Contig Minor Full 2013-08-13 ASM44636v2 IGS GCA_000446365.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/365/GCF_000446365.2_ASM44636v2/ na na na haploid bacteria 5201646 5201646 50.500000 0 396 396 NCBI RefSeq GCF_000446365.2-RS_2025_07_14 2025-07-14 5491 4984 85 na GCF_000446385.2 PRJNA224116 SAMN02435939 AIAR00000000.1 na 1126893 562 Escherichia coli C295_10 strain=C295_10 na latest Contig Minor Full 2013-08-13 ASM44638v2 IGS GCA_000446385.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/385/GCF_000446385.2_ASM44638v2/ na na na haploid bacteria 4664466 4664466 50.500000 0 128 128 NCBI RefSeq GCF_000446385.2-RS_2025_06_17 2025-06-17 4644 4398 89 na GCF_000446405.2 PRJNA224116 SAMN02435904 AIAS00000000.1 na 1126895 562 Escherichia coli C341_10 strain=C341_10 na latest Contig Minor Full 2013-08-13 ASM44640v2 IGS GCA_000446405.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/405/GCF_000446405.2_ASM44640v2/ na na na haploid bacteria 4992294 4992294 50.500000 0 388 388 NCBI RefSeq GCF_000446405.2-RS_2025_07_14 2025-07-14 5124 4783 89 na GCF_000446425.2 PRJNA224116 SAMN02435962 AIAT00000000.1 na 1126896 562 Escherichia coli C343_08 strain=C343_08 na latest Contig Minor Full 2013-08-13 ASM44642v2 IGS GCA_000446425.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/425/GCF_000446425.2_ASM44642v2/ na na na haploid bacteria 5009655 5009655 50.500000 0 395 395 NCBI RefSeq GCF_000446425.2-RS_2025_06_17 2025-06-17 5190 4820 94 na GCF_000446445.2 PRJNA224116 SAMN02435905 AIAU00000000.1 na 1126897 562 Escherichia coli C347_93 strain=C347_93 na latest Contig Minor Full 2013-08-13 ASM44644v2 IGS GCA_000446445.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/445/GCF_000446445.2_ASM44644v2/ na na na haploid bacteria 4984315 4984315 50.500000 0 404 404 NCBI RefSeq GCF_000446445.2-RS_2025_06_17 2025-06-17 5269 4779 105 na GCF_000446465.2 PRJNA224116 SAMN02436004 AIAV00000000.1 na 1126898 562 Escherichia coli C353_09 strain=C353_09 na latest Contig Minor Full 2013-08-13 ASM44646v2 IGS GCA_000446465.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/446/465/GCF_000446465.2_ASM44646v2/ na na na haploid bacteria 5077518 5077518 50.500000 0 564 564 NCBI RefSeq GCF_000446465.2-RS_2025_06_17 2025-06-17 5196 4795 102 na GCF_000446485.2 PRJNA224116 SAMN02435906 AIAW00000000.1 na 1126899 562 Escherichia coli C354_03B strain=C354_03B na latest Contig Minor Full 2013-08-13 ASM44648v2 IGS GCA_000446485.2 identical https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000